Query         010676
Match_columns 504
No_of_seqs    343 out of 2209
Neff          6.0 
Searched_HMMs 46136
Date          Fri Mar 29 03:17:51 2013
Command       hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010676.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010676hhsearch_cdd -cpu 12 -v 0 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 KOG0595 Serine/threonine-prote 100.0 4.6E-37   1E-41  315.6  17.1  172  326-500     7-187 (429)
  2 KOG0598 Ribosomal protein S6 k 100.0 7.7E-36 1.7E-40  303.7  16.4  174  327-502    23-200 (357)
  3 KOG0615 Serine/threonine prote 100.0 9.9E-36 2.1E-40  305.9  16.1  178  326-503   169-354 (475)
  4 KOG0575 Polo-like serine/threo 100.0 1.6E-34 3.5E-39  308.5  17.7  172  329-502    18-193 (592)
  5 KOG0616 cAMP-dependent protein 100.0 3.1E-34 6.8E-39  285.1  14.8  172  328-502    43-216 (355)
  6 KOG0581 Mitogen-activated prot 100.0 1.3E-33 2.9E-38  287.6  16.3  173  326-502    76-252 (364)
  7 KOG0600 Cdc2-related protein k 100.0 1.1E-33 2.4E-38  296.6  12.3  177  322-502   110-294 (560)
  8 KOG0583 Serine/threonine prote 100.0 1.2E-32 2.6E-37  288.3  17.8  178  326-503    14-197 (370)
  9 KOG0591 NIMA (never in mitosis 100.0   2E-34 4.2E-39  285.0   3.2  174  326-502    16-203 (375)
 10 KOG0605 NDR and related serine 100.0   1E-32 2.2E-37  291.2  15.9  150  326-477   138-289 (550)
 11 KOG0593 Predicted protein kina 100.0 2.1E-33 4.6E-38  279.8   9.9  170  329-501     2-175 (396)
 12 KOG0198 MEKK and related serin 100.0 3.8E-32 8.3E-37  277.6  17.2  170  328-502    16-196 (313)
 13 KOG0192 Tyrosine kinase specif 100.0   5E-32 1.1E-36  282.6  16.8  171  328-501    40-218 (362)
 14 KOG0659 Cdk activating kinase  100.0 3.6E-32 7.9E-37  267.1  12.9  170  329-502     2-176 (318)
 15 KOG0592 3-phosphoinositide-dep 100.0 2.9E-32 6.2E-37  287.9  13.0  178  325-504    69-264 (604)
 16 KOG0694 Serine/threonine prote 100.0 5.6E-32 1.2E-36  292.1  13.2  177  325-503   364-544 (694)
 17 KOG0661 MAPK related serine/th 100.0 1.4E-32 3.1E-37  286.6   6.9  171  326-501     7-183 (538)
 18 KOG0663 Protein kinase PITSLRE 100.0 6.5E-32 1.4E-36  272.1  10.9  177  322-502    69-252 (419)
 19 KOG0597 Serine-threonine prote 100.0 7.6E-32 1.6E-36  285.2  11.1  171  329-503     2-176 (808)
 20 KOG0611 Predicted serine/threo 100.0 1.1E-31 2.5E-36  275.1  11.8  182  320-503    44-228 (668)
 21 cd05628 STKc_NDR1 Catalytic do 100.0 2.6E-30 5.7E-35  267.0  18.1  172  329-502     1-211 (363)
 22 cd05629 STKc_NDR_like_fungal C 100.0 4.2E-30 9.1E-35  266.5  18.1  147  329-477     1-149 (377)
 23 cd05621 STKc_ROCK2 Catalytic d 100.0 4.2E-30 9.1E-35  267.6  17.9  173  327-501    41-217 (370)
 24 cd05599 STKc_NDR_like Catalyti 100.0 4.2E-30 9.1E-35  264.3  17.5  149  329-479     1-151 (364)
 25 cd05626 STKc_LATS2 Catalytic d 100.0 7.6E-30 1.7E-34  265.5  18.9  147  330-478     2-150 (381)
 26 PTZ00263 protein kinase A cata 100.0 6.6E-30 1.4E-34  260.6  17.5  173  327-502    16-190 (329)
 27 cd05625 STKc_LATS1 Catalytic d 100.0 9.5E-30 2.1E-34  264.3  18.7  146  330-477     2-149 (382)
 28 KOG0588 Serine/threonine prote 100.0   2E-30 4.3E-35  278.8  13.7  176  326-503     9-187 (786)
 29 cd05598 STKc_LATS Catalytic do 100.0   1E-29 2.2E-34  263.2  18.6  146  330-477     2-149 (376)
 30 KOG0578 p21-activated serine/t 100.0 1.3E-30 2.8E-35  276.8  12.1  170  328-502   272-444 (550)
 31 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 1.3E-29 2.8E-34  258.0  18.6  171  329-502     1-173 (333)
 32 cd05612 STKc_PRKX_like Catalyt 100.0 6.9E-30 1.5E-34  255.3  15.9  171  329-502     1-173 (291)
 33 KOG1187 Serine/threonine prote 100.0 4.3E-30 9.3E-35  268.3  15.0  175  323-502    69-253 (361)
 34 KOG0594 Protein kinase PCTAIRE 100.0 2.3E-30   5E-35  262.8  12.6  171  328-502    10-195 (323)
 35 cd05627 STKc_NDR2 Catalytic do 100.0 1.7E-29 3.6E-34  260.5  18.7  172  329-502     1-211 (360)
 36 cd05571 STKc_PKB Catalytic dom 100.0 1.6E-29 3.4E-34  256.9  17.9  166  335-502     1-170 (323)
 37 KOG0585 Ca2+/calmodulin-depend 100.0 2.7E-30 5.9E-35  269.5  12.1  177  325-501    93-289 (576)
 38 KOG0580 Serine/threonine prote 100.0 8.3E-31 1.8E-35  254.4   7.7  174  327-502    20-197 (281)
 39 cd05596 STKc_ROCK Catalytic do 100.0   2E-29 4.3E-34  262.1  17.7  173  327-501    41-217 (370)
 40 PTZ00426 cAMP-dependent protei 100.0 2.7E-29 5.7E-34  258.5  17.8  175  325-502    26-203 (340)
 41 cd05622 STKc_ROCK1 Catalytic d 100.0 2.8E-29   6E-34  261.3  18.1  174  326-501    40-217 (371)
 42 cd05573 STKc_ROCK_NDR_like Cat 100.0   2E-29 4.3E-34  257.0  16.4  172  329-502     1-205 (350)
 43 cd05631 STKc_GRK4 Catalytic do 100.0 7.4E-29 1.6E-33  246.8  19.7  171  330-502     1-176 (285)
 44 KOG0582 Ste20-like serine/thre 100.0 4.9E-29 1.1E-33  258.7  18.8  176  322-501    19-204 (516)
 45 cd05614 STKc_MSK2_N N-terminal 100.0 5.8E-29 1.2E-33  252.8  18.2  172  330-502     1-181 (332)
 46 KOG0690 Serine/threonine prote 100.0 4.8E-30   1E-34  257.7   9.6  177  323-501   162-342 (516)
 47 cd05595 STKc_PKB_beta Catalyti 100.0 5.5E-29 1.2E-33  253.2  17.6  166  335-502     1-170 (323)
 48 cd05624 STKc_MRCK_beta Catalyt 100.0 7.7E-29 1.7E-33  253.0  18.7  171  329-501     1-177 (331)
 49 cd05589 STKc_PKN Catalytic dom 100.0 4.8E-29   1E-33  253.2  17.1  170  331-502     1-176 (324)
 50 cd05597 STKc_DMPK_like Catalyt 100.0 5.8E-29 1.3E-33  253.9  17.5  170  329-500     1-176 (331)
 51 cd05593 STKc_PKB_gamma Catalyt 100.0 6.7E-29 1.5E-33  253.4  17.9  166  335-502     1-170 (328)
 52 KOG0032 Ca2+/calmodulin-depend 100.0 7.6E-29 1.7E-33  260.5  18.0  175  325-501    31-212 (382)
 53 cd05594 STKc_PKB_alpha Catalyt 100.0 1.1E-28 2.3E-33  250.7  18.4  166  335-502     1-171 (325)
 54 cd05585 STKc_YPK1_like Catalyt 100.0 9.3E-29   2E-33  249.8  17.6  164  337-502     1-168 (312)
 55 cd05601 STKc_CRIK Catalytic do 100.0 9.5E-29 2.1E-33  251.0  17.5  170  329-500     1-176 (330)
 56 cd07871 STKc_PCTAIRE3 Catalyti 100.0 1.2E-28 2.7E-33  245.6  17.8  169  328-501     4-177 (288)
 57 KOG0589 Serine/threonine prote 100.0 1.5E-29 3.4E-34  265.9  11.5  172  328-502     3-181 (426)
 58 cd05587 STKc_cPKC Catalytic do 100.0 1.6E-28 3.6E-33  249.3  18.2  171  330-502     1-176 (324)
 59 KOG0658 Glycogen synthase kina 100.0 1.3E-29 2.9E-34  257.9   9.6  164  329-502    24-200 (364)
 60 cd05102 PTKc_VEGFR3 Catalytic  100.0 1.4E-28   3E-33  250.3  17.1  171  328-502     6-251 (338)
 61 cd05584 STKc_p70S6K Catalytic  100.0 1.6E-28 3.5E-33  249.5  17.6  167  335-502     2-175 (323)
 62 PHA03211 serine/threonine kina 100.0 2.4E-28 5.3E-33  262.6  19.6  163  328-502   168-337 (461)
 63 cd05623 STKc_MRCK_alpha Cataly 100.0 2.9E-28 6.2E-33  248.6  18.7  170  329-500     1-176 (332)
 64 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.3E-28   5E-33  245.0  17.6  169  328-501     4-177 (303)
 65 cd05096 PTKc_DDR1 Catalytic do 100.0 2.8E-28   6E-33  244.2  17.8  170  329-502     5-215 (304)
 66 cd07848 STKc_CDKL5 Catalytic d 100.0 2.6E-28 5.6E-33  241.4  17.1  171  329-502     1-176 (287)
 67 cd05616 STKc_cPKC_beta Catalyt 100.0 3.6E-28 7.8E-33  246.7  18.3  171  330-502     1-176 (323)
 68 cd05588 STKc_aPKC Catalytic do 100.0 2.7E-28 5.8E-33  248.8  17.3  166  335-502     1-171 (329)
 69 cd06649 PKc_MEK2 Catalytic dom 100.0 5.1E-28 1.1E-32  246.7  19.3  171  328-502     4-177 (331)
 70 PLN00034 mitogen-activated pro 100.0 3.1E-28 6.7E-33  250.4  17.3  167  327-500    72-241 (353)
 71 cd05602 STKc_SGK1 Catalytic do 100.0 3.3E-28 7.2E-33  247.1  17.3  166  335-502     1-171 (325)
 72 cd05582 STKc_RSK_N N-terminal  100.0   3E-28 6.6E-33  246.4  16.6  165  335-502     2-173 (318)
 73 cd05604 STKc_SGK3 Catalytic do 100.0 4.4E-28 9.5E-33  246.3  17.5  166  335-502     1-171 (325)
 74 cd05575 STKc_SGK Catalytic dom 100.0 4.2E-28 9.1E-33  246.2  17.2  166  335-502     1-171 (323)
 75 cd05603 STKc_SGK2 Catalytic do 100.0   5E-28 1.1E-32  245.1  17.5  166  335-502     1-171 (321)
 76 cd05618 STKc_aPKC_iota Catalyt 100.0 5.2E-28 1.1E-32  247.0  17.6  166  335-502     1-171 (329)
 77 cd07859 STKc_TDY_MAPK_plant Ca 100.0 4.7E-28   1E-32  245.0  16.8  168  330-501     1-180 (338)
 78 cd05592 STKc_nPKC_theta_delta  100.0 5.1E-28 1.1E-32  245.4  16.9  166  335-502     1-171 (316)
 79 cd05615 STKc_cPKC_alpha Cataly 100.0 5.8E-28 1.3E-32  245.7  17.3  171  330-502     1-176 (323)
 80 cd05590 STKc_nPKC_eta Catalyti 100.0 4.9E-28 1.1E-32  245.9  16.6  166  335-502     1-171 (320)
 81 cd06650 PKc_MEK1 Catalytic dom 100.0 8.1E-28 1.8E-32  245.9  18.1  171  328-502     4-177 (333)
 82 cd05605 STKc_GRK4_like Catalyt 100.0 1.1E-27 2.3E-32  238.4  18.5  171  330-502     1-176 (285)
 83 cd05591 STKc_nPKC_epsilon Cata 100.0   6E-28 1.3E-32  244.8  16.9  166  335-502     1-171 (321)
 84 cd05608 STKc_GRK1 Catalytic do 100.0 9.2E-28   2E-32  238.4  17.7  164  337-502     1-172 (280)
 85 KOG0660 Mitogen-activated prot 100.0   1E-28 2.3E-33  251.0  11.0  172  326-501    19-201 (359)
 86 PTZ00267 NIMA-related protein  100.0 1.1E-27 2.4E-32  257.7  19.5  169  329-502    67-246 (478)
 87 PHA03212 serine/threonine kina 100.0 6.1E-28 1.3E-32  253.6  17.1  163  328-502    91-258 (391)
 88 cd05617 STKc_aPKC_zeta Catalyt 100.0   1E-27 2.3E-32  244.2  18.0  166  335-502     1-171 (327)
 89 KOG0610 Putative serine/threon 100.0 3.4E-28 7.3E-33  250.7  14.0  148  328-477    76-227 (459)
 90 cd07876 STKc_JNK2 Catalytic do 100.0 1.9E-27   4E-32  244.9  19.5  172  326-502    18-197 (359)
 91 cd06625 STKc_MEKK3_like Cataly 100.0 2.8E-27 6.2E-32  229.9  19.6  174  329-502     2-182 (263)
 92 cd07862 STKc_CDK6 Catalytic do 100.0 1.3E-27 2.8E-32  236.7  17.4  170  329-502     1-184 (290)
 93 cd05586 STKc_Sck1_like Catalyt 100.0   1E-27 2.2E-32  243.8  16.9  163  337-501     1-170 (330)
 94 PF00069 Pkinase:  Protein kina 100.0 9.9E-28 2.2E-32  231.9  15.8  167  331-500     1-171 (260)
 95 cd05620 STKc_nPKC_delta Cataly 100.0 1.1E-27 2.5E-32  242.8  16.5  166  335-502     1-171 (316)
 96 KOG0201 Serine/threonine prote 100.0   3E-29 6.4E-34  259.9   4.8  168  330-501    14-185 (467)
 97 KOG4236 Serine/threonine prote 100.0 4.8E-28   1E-32  254.5  13.8  170  331-503   564-742 (888)
 98 KOG0584 Serine/threonine prote 100.0 1.2E-28 2.7E-33  264.2   9.3  179  318-503    35-220 (632)
 99 KOG0599 Phosphorylase kinase g 100.0 1.5E-28 3.2E-33  242.5   8.8  177  326-502    14-197 (411)
100 cd05619 STKc_nPKC_theta Cataly 100.0 1.7E-27 3.8E-32  241.8  17.0  166  335-502     1-171 (316)
101 KOG0033 Ca2+/calmodulin-depend 100.0 1.7E-29 3.7E-34  246.1   2.1  173  326-501     8-186 (355)
102 KOG0197 Tyrosine kinases [Sign 100.0 5.4E-28 1.2E-32  255.5  13.3  173  323-501   200-378 (468)
103 cd07878 STKc_p38beta_MAPK11 Ca  99.9 1.4E-27   3E-32  243.8  15.7  171  326-501    12-189 (343)
104 KOG0667 Dual-specificity tyros  99.9 1.4E-27   3E-32  257.3  15.9  165  330-502   187-363 (586)
105 cd05570 STKc_PKC Catalytic dom  99.9 2.4E-27 5.3E-32  240.4  16.8  166  335-502     1-171 (318)
106 KOG0986 G protein-coupled rece  99.9 2.5E-28 5.5E-33  253.6   9.6  175  327-503   183-362 (591)
107 cd06619 PKc_MKK5 Catalytic dom  99.9   5E-27 1.1E-31  232.3  18.2  166  330-502     2-168 (279)
108 cd07872 STKc_PCTAIRE2 Catalyti  99.9 4.5E-27 9.7E-32  236.3  17.8  169  328-501     5-178 (309)
109 cd05632 STKc_GRK5 Catalytic do  99.9 8.9E-27 1.9E-31  231.9  19.5  170  331-502     2-176 (285)
110 cd05630 STKc_GRK6 Catalytic do  99.9 9.8E-27 2.1E-31  231.9  19.4  170  331-502     2-176 (285)
111 cd07853 STKc_NLK Catalytic dom  99.9 2.4E-27 5.2E-32  245.4  15.4  168  330-501     1-178 (372)
112 cd06652 STKc_MEKK2 Catalytic d  99.9 1.2E-26 2.5E-31  227.0  19.2  174  329-502     2-184 (265)
113 KOG0612 Rho-associated, coiled  99.9 1.3E-28 2.8E-33  276.3   5.9  173  327-501    73-250 (1317)
114 cd05104 PTKc_Kit Catalytic dom  99.9 4.3E-27 9.3E-32  245.0  17.0  173  326-502    32-291 (375)
115 PTZ00036 glycogen synthase kin  99.9   6E-27 1.3E-31  249.7  18.4  164  328-501    65-244 (440)
116 KOG0586 Serine/threonine prote  99.9   3E-27 6.5E-32  253.1  16.0  174  326-502    53-229 (596)
117 cd05580 STKc_PKA Catalytic dom  99.9 1.1E-26 2.3E-31  231.2  18.8  171  329-502     1-173 (290)
118 cd05106 PTKc_CSF-1R Catalytic   99.9   5E-27 1.1E-31  244.7  17.0  176  323-502    32-289 (374)
119 cd07863 STKc_CDK4 Catalytic do  99.9 8.8E-27 1.9E-31  230.2  17.9  169  330-502     1-182 (288)
120 cd05064 PTKc_EphR_A10 Catalyti  99.9 6.8E-27 1.5E-31  229.8  17.0  170  329-502     5-183 (266)
121 cd05607 STKc_GRK7 Catalytic do  99.9 8.9E-27 1.9E-31  230.9  17.9  164  337-502     1-169 (277)
122 KOG0193 Serine/threonine prote  99.9 1.6E-27 3.4E-32  254.7  13.2  171  324-500   387-563 (678)
123 PTZ00283 serine/threonine prot  99.9 9.7E-27 2.1E-31  252.1  19.6  173  327-502    30-220 (496)
124 cd06632 STKc_MEKK1_plant Catal  99.9 9.6E-27 2.1E-31  224.8  17.5  173  330-502     1-176 (258)
125 cd06615 PKc_MEK Catalytic doma  99.9 1.2E-26 2.6E-31  233.8  18.9  170  329-502     1-173 (308)
126 cd07874 STKc_JNK3 Catalytic do  99.9 4.8E-27   1E-31  241.2  16.2  172  326-502    14-193 (355)
127 KOG0577 Serine/threonine prote  99.9   3E-28 6.5E-33  258.7   7.2  166  330-500    27-195 (948)
128 PHA03209 serine/threonine kina  99.9 5.2E-27 1.1E-31  242.4  16.3  162  329-502    66-231 (357)
129 PHA03207 serine/threonine kina  99.9 1.6E-26 3.5E-31  241.8  19.9  165  327-502    90-262 (392)
130 cd07875 STKc_JNK1 Catalytic do  99.9 1.2E-26 2.7E-31  239.2  18.6  172  326-502    21-200 (364)
131 cd05105 PTKc_PDGFR_alpha Catal  99.9 1.4E-26   3E-31  244.4  19.2  177  322-502    30-314 (400)
132 cd06622 PKc_MAPKK_PBS2_like Ca  99.9 7.2E-27 1.6E-31  231.0  15.7  170  329-502     1-176 (286)
133 cd08228 STKc_Nek6 Catalytic do  99.9 1.4E-26 3.1E-31  225.9  17.6  172  329-502     2-181 (267)
134 cd06631 STKc_YSK4 Catalytic do  99.9 2.1E-26 4.5E-31  224.8  18.4  173  330-502     1-183 (265)
135 cd05068 PTKc_Frk_like Catalyti  99.9 1.8E-26 3.8E-31  225.2  17.8  169  328-502     5-179 (261)
136 cd06646 STKc_MAP4K5 Catalytic   99.9 1.3E-26 2.8E-31  226.5  16.8  168  328-500     8-179 (267)
137 cd08529 STKc_FA2-like Catalyti  99.9 3.4E-26 7.3E-31  221.1  19.4  170  330-502     1-176 (256)
138 cd05114 PTKc_Tec_Rlk Catalytic  99.9 1.9E-26 4.1E-31  224.4  17.7  168  329-502     4-176 (256)
139 cd05072 PTKc_Lyn Catalytic dom  99.9 2.4E-26 5.2E-31  224.0  17.4  169  328-502     5-179 (261)
140 cd05059 PTKc_Tec_like Catalyti  99.9 2.1E-26 4.6E-31  224.4  16.8  168  329-502     4-176 (256)
141 cd05090 PTKc_Ror1 Catalytic do  99.9 2.6E-26 5.6E-31  227.0  17.6  170  329-502     5-201 (283)
142 cd06645 STKc_MAP4K3 Catalytic   99.9 1.3E-26 2.7E-31  226.6  15.0  167  329-500     9-179 (267)
143 cd07861 STKc_CDK1_euk Catalyti  99.9 2.8E-26   6E-31  225.9  17.4  168  330-501     1-175 (285)
144 cd06654 STKc_PAK1 Catalytic do  99.9 3.7E-26   8E-31  228.9  18.5  172  326-502    17-191 (296)
145 cd06656 STKc_PAK3 Catalytic do  99.9 3.5E-26 7.6E-31  229.2  18.3  172  326-502    16-190 (297)
146 cd08219 STKc_Nek3 Catalytic do  99.9 5.3E-26 1.2E-30  220.7  19.0  169  330-502     1-175 (255)
147 cd07841 STKc_CDK7 Catalytic do  99.9   2E-26 4.4E-31  229.0  16.4  171  330-501     1-176 (298)
148 PRK13184 pknD serine/threonine  99.9 3.2E-26   7E-31  260.6  20.0  173  328-502     1-206 (932)
149 KOG4250 TANK binding protein k  99.9 2.8E-27 6.1E-32  256.5  10.7  169  329-501    13-197 (732)
150 cd06628 STKc_MAPKKK_Byr2_like   99.9 4.6E-26   1E-30  222.3  18.2  173  330-502     1-187 (267)
151 cd06653 STKc_MEKK3_like_1 Cata  99.9 5.7E-26 1.2E-30  222.3  18.6  174  329-502     2-184 (264)
152 cd07868 STKc_CDK8 Catalytic do  99.9 2.7E-26 5.7E-31  230.9  16.7  160  334-501     6-189 (317)
153 cd05084 PTKc_Fes Catalytic dom  99.9 4.4E-26 9.5E-31  221.0  17.6  164  335-502     1-171 (252)
154 cd08229 STKc_Nek7 Catalytic do  99.9 2.3E-26   5E-31  224.4  15.5  172  329-502     2-181 (267)
155 cd06651 STKc_MEKK3 Catalytic d  99.9 6.7E-26 1.5E-30  222.1  18.7  173  330-502     3-184 (266)
156 KOG0574 STE20-like serine/thre  99.9   4E-28 8.7E-33  241.8   2.8  165  329-500    33-202 (502)
157 cd08224 STKc_Nek6_Nek7 Catalyt  99.9 8.2E-26 1.8E-30  219.8  18.9  172  329-502     2-181 (267)
158 cd07832 STKc_CCRK Catalytic do  99.9 5.6E-26 1.2E-30  223.5  17.9  168  330-501     1-174 (286)
159 cd05051 PTKc_DDR Catalytic dom  99.9 4.4E-26 9.5E-31  226.1  17.2  171  328-502     4-207 (296)
160 KOG4717 Serine/threonine prote  99.9 8.9E-27 1.9E-31  244.6  12.7  174  326-502    15-193 (864)
161 cd08221 STKc_Nek9 Catalytic do  99.9 9.3E-26   2E-30  218.8  19.0  170  330-502     1-176 (256)
162 cd07873 STKc_PCTAIRE1 Catalyti  99.9 4.8E-26   1E-30  227.7  17.6  169  328-501     5-178 (301)
163 cd06613 STKc_MAP4K3_like Catal  99.9 8.1E-26 1.8E-30  219.2  18.4  169  329-502     3-176 (262)
164 cd05062 PTKc_IGF-1R Catalytic   99.9 5.6E-26 1.2E-30  223.9  17.6  172  327-502     4-196 (277)
165 cd05048 PTKc_Ror Catalytic Dom  99.9 3.9E-26 8.5E-31  225.0  16.5  171  328-502     4-201 (283)
166 cd05108 PTKc_EGFR Catalytic do  99.9 4.3E-26 9.4E-31  230.2  17.1  169  329-502     7-186 (316)
167 cd06630 STKc_MEKK1 Catalytic d  99.9 5.3E-26 1.2E-30  221.6  17.1  173  330-502     1-183 (268)
168 KOG4645 MAPKKK (MAP kinase kin  99.9 8.7E-28 1.9E-32  272.5   5.2  176  324-502  1230-1413(1509)
169 cd05113 PTKc_Btk_Bmx Catalytic  99.9 5.3E-26 1.2E-30  222.2  17.1  168  329-502     4-176 (256)
170 cd06655 STKc_PAK2 Catalytic do  99.9 1.1E-25 2.3E-30  225.8  19.7  171  327-502    17-190 (296)
171 cd05093 PTKc_TrkB Catalytic do  99.9 5.5E-26 1.2E-30  225.9  17.4  169  329-502     5-197 (288)
172 cd05578 STKc_Yank1 Catalytic d  99.9 3.7E-26   8E-31  222.2  15.7  171  330-502     1-174 (258)
173 cd00192 PTKc Catalytic domain   99.9   6E-26 1.3E-30  218.4  17.0  164  335-502     1-182 (262)
174 PTZ00284 protein kinase; Provi  99.9 1.5E-25 3.2E-30  239.9  21.9  167  328-502   128-320 (467)
175 cd05049 PTKc_Trk Catalytic dom  99.9 3.3E-26 7.2E-31  224.8  15.4  170  329-502     5-199 (280)
176 cd07847 STKc_CDKL1_4 Catalytic  99.9   7E-26 1.5E-30  222.8  17.8  170  329-501     1-174 (286)
177 cd05080 PTKc_Tyk2_rpt2 Catalyt  99.9 7.6E-26 1.6E-30  223.7  18.0  169  330-502     5-185 (283)
178 cd05111 PTK_HER3 Pseudokinase   99.9 7.5E-26 1.6E-30  224.2  18.0  169  329-502     7-186 (279)
179 cd05148 PTKc_Srm_Brk Catalytic  99.9 2.5E-26 5.5E-31  223.4  14.2  171  327-502     4-179 (261)
180 cd05098 PTKc_FGFR1 Catalytic d  99.9 7.6E-26 1.6E-30  227.2  18.0  176  323-502    12-217 (307)
181 KOG0194 Protein tyrosine kinas  99.9   3E-26 6.5E-31  244.6  15.9  175  327-503   155-338 (474)
182 cd05039 PTKc_Csk_like Catalyti  99.9   1E-25 2.2E-30  218.9  18.3  167  328-502     5-174 (256)
183 cd05097 PTKc_DDR_like Catalyti  99.9 4.4E-26 9.6E-31  227.3  16.1  170  329-502     5-206 (295)
184 cd05042 PTKc_Aatyk Catalytic d  99.9 5.2E-26 1.1E-30  222.9  16.3  161  336-500     2-175 (269)
185 KOG0662 Cyclin-dependent kinas  99.9 6.2E-27 1.4E-31  219.8   9.2  171  329-503     2-177 (292)
186 cd06644 STKc_STK10_LOK Catalyt  99.9 7.6E-26 1.7E-30  225.0  17.7  167  329-500    12-183 (292)
187 cd05574 STKc_phototropin_like   99.9 1.2E-25 2.5E-30  226.1  19.1  172  329-502     1-207 (316)
188 KOG0579 Ste20-like serine/thre  99.9 1.1E-27 2.4E-32  255.5   4.6  168  329-501    32-204 (1187)
189 cd05081 PTKc_Jak2_Jak3_rpt2 Ca  99.9   1E-25 2.2E-30  222.5  18.3  169  329-502     4-186 (284)
190 cd07844 STKc_PCTAIRE_like Cata  99.9 8.8E-26 1.9E-30  223.7  17.8  169  328-501     4-177 (291)
191 cd06638 STKc_myosinIIIA Cataly  99.9   1E-25 2.3E-30  222.3  18.1  172  323-500    12-197 (286)
192 cd08223 STKc_Nek4 Catalytic do  99.9 1.8E-25 3.8E-30  216.6  19.3  170  330-502     1-177 (257)
193 cd06611 STKc_SLK_like Catalyti  99.9 4.7E-26   1E-30  224.5  15.5  167  329-500     5-176 (280)
194 cd06643 STKc_SLK Catalytic dom  99.9 9.2E-26   2E-30  223.0  17.5  166  330-500     6-176 (282)
195 cd05052 PTKc_Abl Catalytic dom  99.9 9.3E-26   2E-30  220.7  17.2  169  328-502     5-180 (263)
196 cd06629 STKc_MAPKKK_Bck1_like   99.9 1.3E-25 2.7E-30  220.2  18.1  172  330-501     2-184 (272)
197 cd07839 STKc_CDK5 Catalytic do  99.9 4.1E-26   9E-31  225.0  14.7  168  330-501     1-173 (284)
198 KOG1035 eIF-2alpha kinase GCN2  99.9   6E-27 1.3E-31  264.6   9.8  175  324-502   474-790 (1351)
199 cd05079 PTKc_Jak1_rpt2 Catalyt  99.9 9.5E-26 2.1E-30  223.4  17.3  169  330-502     5-187 (284)
200 KOG0608 Warts/lats-like serine  99.9 2.2E-26 4.8E-31  246.0  13.5  146  330-477   630-777 (1034)
201 cd05088 PTKc_Tie2 Catalytic do  99.9 1.1E-25 2.3E-30  226.3  17.7  171  328-502     6-198 (303)
202 cd05034 PTKc_Src_like Catalyti  99.9 1.2E-25 2.7E-30  218.5  17.4  170  327-502     4-179 (261)
203 cd05032 PTKc_InsR_like Catalyt  99.9 1.2E-25 2.7E-30  220.4  17.6  171  328-502     5-196 (277)
204 cd06626 STKc_MEKK4 Catalytic d  99.9 1.8E-25   4E-30  216.9  18.4  170  330-502     1-178 (264)
205 cd05033 PTKc_EphR Catalytic do  99.9 1.4E-25   3E-30  219.5  17.6  170  329-502     4-183 (266)
206 cd05101 PTKc_FGFR2 Catalytic d  99.9 1.3E-25 2.8E-30  224.9  17.8  175  324-502    10-214 (304)
207 cd05066 PTKc_EphR_A Catalytic   99.9 1.1E-25 2.4E-30  220.6  16.9  170  329-502     4-184 (267)
208 cd05067 PTKc_Lck_Blk Catalytic  99.9 1.4E-25   3E-30  218.8  17.3  169  327-502     4-178 (260)
209 cd05610 STKc_MASTL Catalytic d  99.9 1.5E-25 3.4E-30  250.9  20.1  171  328-500     3-177 (669)
210 PTZ00266 NIMA-related protein   99.9 1.3E-25 2.7E-30  257.0  19.6  174  325-501     9-215 (1021)
211 cd07870 STKc_PFTAIRE2 Catalyti  99.9 1.9E-25 4.2E-30  221.6  18.6  169  328-501     4-177 (291)
212 cd05071 PTKc_Src Catalytic dom  99.9 1.5E-25 3.3E-30  219.8  17.5  168  328-502     5-178 (262)
213 KOG1152 Signal transduction se  99.9   2E-26 4.4E-31  244.7  12.0  181  321-502   554-743 (772)
214 cd05609 STKc_MAST Catalytic do  99.9 3.1E-25 6.7E-30  222.6  20.1  171  330-502     2-191 (305)
215 cd05606 STKc_beta_ARK Catalyti  99.9   2E-25 4.3E-30  221.4  18.4  167  336-502     1-170 (278)
216 cd05070 PTKc_Fyn_Yrk Catalytic  99.9 1.3E-25 2.8E-30  219.0  16.7  169  327-502     4-178 (260)
217 cd05061 PTKc_InsR Catalytic do  99.9 1.7E-25 3.6E-30  222.4  17.9  171  328-502     5-196 (288)
218 cd05053 PTKc_FGFR Catalytic do  99.9 2.2E-25 4.8E-30  221.1  18.5  174  325-502     8-209 (293)
219 cd05091 PTKc_Ror2 Catalytic do  99.9 5.9E-26 1.3E-30  224.1  14.2  170  329-502     5-201 (283)
220 cd05099 PTKc_FGFR4 Catalytic d  99.9   2E-25 4.4E-30  225.1  18.5  173  326-502     9-211 (314)
221 cd06609 STKc_MST3_like Catalyt  99.9 1.4E-25   3E-30  220.5  16.5  170  329-502     1-173 (274)
222 PHA02988 hypothetical protein;  99.9 1.4E-25 3.1E-30  224.1  16.8  163  335-501    26-194 (283)
223 cd05633 STKc_GRK3 Catalytic do  99.9 2.6E-25 5.7E-30  221.0  18.5  164  336-501     1-169 (279)
224 cd05103 PTKc_VEGFR2 Catalytic   99.9 1.2E-25 2.6E-30  230.5  16.6  171  328-502     6-256 (343)
225 cd06641 STKc_MST3 Catalytic do  99.9 2.2E-25 4.7E-30  220.1  17.7  169  330-502     5-176 (277)
226 cd06642 STKc_STK25-YSK1 Cataly  99.9 6.5E-26 1.4E-30  223.5  13.9  170  329-502     4-176 (277)
227 cd06620 PKc_MAPKK_Byr1_like Ca  99.9 9.5E-26 2.1E-30  223.4  15.1  170  329-502     5-177 (284)
228 PHA03210 serine/threonine kina  99.9 8.9E-26 1.9E-30  244.7  16.2  176  326-502   145-343 (501)
229 cd06640 STKc_MST4 Catalytic do  99.9 1.9E-25 4.2E-30  220.5  17.2  170  329-502     4-176 (277)
230 cd07867 STKc_CDC2L6 Catalytic   99.9 1.5E-25 3.4E-30  224.6  16.7  160  334-501     6-189 (317)
231 cd06637 STKc_TNIK Catalytic do  99.9 1.5E-25 3.1E-30  219.4  16.1  167  328-500     5-184 (272)
232 cd05094 PTKc_TrkC Catalytic do  99.9 2.4E-25 5.1E-30  221.7  17.9  169  329-502     5-200 (291)
233 cd05045 PTKc_RET Catalytic dom  99.9 1.8E-25 3.8E-30  222.2  16.8  169  330-502     1-204 (290)
234 cd05037 PTK_Jak_rpt1 Pseudokin  99.9 1.2E-25 2.5E-30  217.7  15.2  159  335-502     1-179 (259)
235 cd05073 PTKc_Hck Catalytic dom  99.9   3E-25 6.5E-30  216.8  18.2  170  326-502     3-178 (260)
236 KOG1989 ARK protein kinase fam  99.9 1.4E-25   3E-30  248.2  17.6  168  328-500    36-228 (738)
237 cd05087 PTKc_Aatyk1_Aatyk3 Cat  99.9 2.1E-25 4.5E-30  219.0  17.1  163  335-501     1-176 (269)
238 cd05613 STKc_MSK1_N N-terminal  99.9 2.5E-25 5.4E-30  220.7  17.7  171  330-501     1-180 (290)
239 cd08227 PK_STRAD_alpha Pseudok  99.9 1.7E-25 3.6E-30  227.3  16.7  166  333-501     2-182 (327)
240 cd07843 STKc_CDC2L1 Catalytic   99.9 1.3E-25 2.9E-30  223.0  15.7  170  328-501     4-180 (293)
241 KOG3653 Transforming growth fa  99.9 2.3E-26   5E-31  240.1  10.5  165  329-502   210-393 (534)
242 cd07833 STKc_CDKL Catalytic do  99.9 1.9E-25 4.1E-30  220.0  16.4  171  329-502     1-176 (288)
243 cd08218 STKc_Nek1 Catalytic do  99.9 4.3E-25 9.3E-30  214.2  18.6  170  330-502     1-176 (256)
244 cd08217 STKc_Nek2 Catalytic do  99.9 3.6E-25 7.8E-30  213.8  18.0  170  330-502     1-185 (265)
245 cd06610 STKc_OSR1_SPAK Catalyt  99.9 3.6E-25 7.9E-30  214.8  18.1  170  329-502     1-181 (267)
246 cd05082 PTKc_Csk Catalytic dom  99.9 2.6E-25 5.7E-30  216.4  17.0  166  328-502     5-174 (256)
247 cd06917 STKc_NAK1_like Catalyt  99.9 1.8E-25 3.8E-30  219.7  16.0  168  330-501     2-175 (277)
248 cd07846 STKc_CDKL2_3 Catalytic  99.9 1.3E-25 2.9E-30  221.2  15.1  170  329-501     1-174 (286)
249 cd05035 PTKc_Axl_like Catalyti  99.9 3.1E-25 6.8E-30  216.4  17.6  169  331-502     1-190 (273)
250 cd05054 PTKc_VEGFR Catalytic d  99.9 1.4E-25   3E-30  230.3  15.8  170  329-502     7-250 (337)
251 cd05085 PTKc_Fer Catalytic dom  99.9 2.8E-25 6.1E-30  214.7  16.9  164  335-502     1-169 (250)
252 KOG0596 Dual specificity; seri  99.9 3.8E-26 8.3E-31  241.9  11.7  174  322-500   354-534 (677)
253 cd05100 PTKc_FGFR3 Catalytic d  99.9 3.2E-25 6.9E-30  225.9  18.1  172  327-502    10-211 (334)
254 cd05112 PTKc_Itk Catalytic dom  99.9   4E-25 8.6E-30  214.4  17.9  168  329-502     4-176 (256)
255 cd05069 PTKc_Yes Catalytic dom  99.9 3.9E-25 8.4E-30  216.0  17.8  167  329-502     6-178 (260)
256 cd05086 PTKc_Aatyk2 Catalytic   99.9 2.5E-25 5.3E-30  219.0  16.5  161  336-500     2-174 (268)
257 cd08220 STKc_Nek8 Catalytic do  99.9 5.1E-25 1.1E-29  212.9  18.4  170  330-502     1-176 (256)
258 cd06658 STKc_PAK5 Catalytic do  99.9 9.2E-26   2E-30  225.9  13.6  170  328-502    21-193 (292)
259 KOG4279 Serine/threonine prote  99.9 3.3E-26 7.2E-31  246.4  11.0  162  336-502   582-751 (1226)
260 cd05095 PTKc_DDR2 Catalytic do  99.9 2.7E-25   6E-30  221.7  17.0  170  329-502     5-207 (296)
261 cd06617 PKc_MKK3_6 Catalytic d  99.9 4.1E-25 8.9E-30  217.4  17.8  168  329-501     1-177 (283)
262 KOG2052 Activin A type IB rece  99.9 7.6E-26 1.7E-30  234.9  13.2  170  326-502   208-395 (513)
263 cd05089 PTKc_Tie1 Catalytic do  99.9 3.2E-25 6.9E-30  221.7  17.2  170  329-502     2-193 (297)
264 cd06623 PKc_MAPKK_plant_like C  99.9 5.1E-25 1.1E-29  213.4  18.1  169  330-502     2-175 (264)
265 smart00219 TyrKc Tyrosine kina  99.9 3.6E-25 7.8E-30  213.4  16.9  168  331-502     1-179 (258)
266 cd05055 PTKc_PDGFR Catalytic d  99.9 4.3E-25 9.4E-30  222.1  18.1  175  324-502    30-218 (302)
267 cd07865 STKc_CDK9 Catalytic do  99.9 3.7E-25   8E-30  220.2  17.4  175  324-502     7-198 (310)
268 KOG0666 Cyclin C-dependent kin  99.9 1.1E-26 2.4E-31  232.6   6.3  171  328-502    23-214 (438)
269 cd05107 PTKc_PDGFR_beta Cataly  99.9 4.1E-25 8.9E-30  233.4  18.5  175  324-502    32-316 (401)
270 cd06608 STKc_myosinIII_like Ca  99.9 3.9E-25 8.4E-30  215.1  16.8  169  327-501     4-187 (275)
271 cd05046 PTK_CCK4 Pseudokinase   99.9 2.7E-25 5.9E-30  218.1  15.9  170  329-502     5-193 (275)
272 cd07836 STKc_Pho85 Catalytic d  99.9 4.9E-25 1.1E-29  217.0  17.6  167  330-501     1-174 (284)
273 PRK09188 serine/threonine prot  99.9 3.2E-25 6.9E-30  231.7  17.1  170  322-501    11-194 (365)
274 cd06659 STKc_PAK6 Catalytic do  99.9 1.2E-25 2.7E-30  225.5  13.5  168  330-502    22-192 (297)
275 cd07849 STKc_ERK1_2_like Catal  99.9 2.3E-25 4.9E-30  227.1  15.6  170  327-501     3-183 (336)
276 cd06612 STKc_MST1_2 Catalytic   99.9 4.5E-25 9.7E-30  213.3  16.8  167  329-502     3-174 (256)
277 cd06605 PKc_MAPKK Catalytic do  99.9 1.6E-25 3.4E-30  218.0  13.7  169  330-502     2-174 (265)
278 cd06647 STKc_PAK_I Catalytic d  99.9 3.9E-25 8.4E-30  221.2  16.9  170  328-502    18-190 (293)
279 cd07850 STKc_JNK Catalytic dom  99.9 4.4E-25 9.6E-30  226.7  17.7  172  326-502    13-192 (353)
280 cd05075 PTKc_Axl Catalytic dom  99.9 4.5E-25 9.8E-30  215.9  16.9  169  331-502     1-189 (272)
281 cd05065 PTKc_EphR_B Catalytic   99.9 5.5E-25 1.2E-29  215.7  17.5  170  329-502     4-186 (269)
282 cd05122 PKc_STE Catalytic doma  99.9 8.3E-25 1.8E-29  208.6  18.3  168  330-502     1-172 (253)
283 cd05109 PTKc_HER2 Catalytic do  99.9 5.1E-25 1.1E-29  217.4  17.3  170  328-502     6-186 (279)
284 cd06621 PKc_MAPKK_Pek1_like Ca  99.9   1E-24 2.3E-29  216.6  19.5  170  329-502     1-178 (287)
285 cd06606 STKc_MAPKKK Catalytic   99.9 1.1E-24 2.3E-29  208.6  18.8  170  330-502     1-178 (260)
286 cd05038 PTKc_Jak_rpt2 Catalyti  99.9 5.6E-25 1.2E-29  215.8  17.2  170  329-502     4-187 (284)
287 cd06627 STKc_Cdc7_like Catalyt  99.9   1E-24 2.2E-29  209.8  18.6  170  330-502     1-174 (254)
288 cd05036 PTKc_ALK_LTK Catalytic  99.9   5E-25 1.1E-29  217.5  16.8  170  329-502     6-196 (277)
289 cd05040 PTKc_Ack_like Catalyti  99.9 4.3E-25 9.2E-30  214.3  16.0  163  335-502     1-175 (257)
290 cd07842 STKc_CDK8_like Catalyt  99.9 3.3E-25 7.1E-30  221.5  15.3  169  330-501     1-189 (316)
291 cd07860 STKc_CDK2_3 Catalytic   99.9 5.2E-25 1.1E-29  217.1  16.3  168  330-501     1-174 (284)
292 cd05577 STKc_GRK Catalytic dom  99.9 6.4E-25 1.4E-29  216.7  16.9  164  337-502     1-169 (277)
293 cd05092 PTKc_TrkA Catalytic do  99.9 5.1E-25 1.1E-29  218.1  16.2  169  329-502     5-199 (280)
294 cd05116 PTKc_Syk Catalytic dom  99.9 7.7E-25 1.7E-29  213.5  17.2  163  336-502     2-173 (257)
295 cd07880 STKc_p38gamma_MAPK12 C  99.9 6.8E-25 1.5E-29  225.0  17.6  170  327-501    13-189 (343)
296 cd05115 PTKc_Zap-70 Catalytic   99.9 7.6E-25 1.7E-29  214.5  17.2  161  337-502     3-173 (257)
297 KOG4721 Serine/threonine prote  99.9 3.6E-26 7.8E-31  242.2   8.3  159  333-504   128-288 (904)
298 cd08530 STKc_CNK2-like Catalyt  99.9 7.7E-25 1.7E-29  211.2  16.9  170  330-502     1-176 (256)
299 cd05041 PTKc_Fes_like Catalyti  99.9 8.9E-25 1.9E-29  211.3  17.4  164  335-502     1-170 (251)
300 cd07845 STKc_CDK10 Catalytic d  99.9 6.6E-25 1.4E-29  220.3  17.1  171  327-501     5-182 (309)
301 cd08215 STKc_Nek Catalytic dom  99.9 1.1E-24 2.3E-29  209.3  17.7  170  330-502     1-178 (258)
302 cd05572 STKc_cGK_PKG Catalytic  99.9 9.5E-25 2.1E-29  212.8  17.5  164  337-502     1-167 (262)
303 cd06639 STKc_myosinIIIB Cataly  99.9 1.3E-24 2.9E-29  215.6  18.8  171  325-501    18-202 (291)
304 cd05057 PTKc_EGFR_like Catalyt  99.9 9.5E-25 2.1E-29  215.4  17.6  169  329-502     7-186 (279)
305 cd06624 STKc_ASK Catalytic dom  99.9 1.4E-24 2.9E-29  212.8  18.6  163  334-501    13-183 (268)
306 cd05581 STKc_PDK1 Catalytic do  99.9   5E-25 1.1E-29  215.3  15.4  172  329-502     1-197 (280)
307 cd07840 STKc_CDK9_like Catalyt  99.9 7.2E-25 1.6E-29  215.0  16.5  167  331-501     1-175 (287)
308 PF07714 Pkinase_Tyr:  Protein   99.9 3.6E-25 7.9E-30  217.6  14.5  167  332-502     2-180 (259)
309 cd05579 STKc_MAST_like Catalyt  99.9 5.1E-25 1.1E-29  212.8  15.2  164  337-502     1-176 (265)
310 cd05043 PTK_Ryk Pseudokinase d  99.9 8.5E-25 1.8E-29  215.5  17.0  171  328-502     5-194 (280)
311 KOG0607 MAP kinase-interacting  99.9 6.5E-26 1.4E-30  227.7   9.0  168  328-500    76-259 (463)
312 cd06636 STKc_MAP4K4_6 Catalyti  99.9 1.1E-24 2.3E-29  215.0  17.6  167  328-500    15-194 (282)
313 cd05077 PTK_Jak1_rpt1 Pseudoki  99.9 9.3E-25   2E-29  214.8  17.0  159  335-500     1-181 (262)
314 cd05083 PTKc_Chk Catalytic dom  99.9 7.6E-25 1.6E-29  212.9  16.2  165  328-502     5-172 (254)
315 cd05056 PTKc_FAK Catalytic dom  99.9 1.3E-24 2.8E-29  213.1  17.8  169  329-502     6-183 (270)
316 cd05050 PTKc_Musk Catalytic do  99.9 6.9E-25 1.5E-29  217.4  15.8  170  329-502     5-207 (288)
317 cd05063 PTKc_EphR_A2 Catalytic  99.9 1.3E-24 2.9E-29  212.4  17.4  170  329-502     5-185 (268)
318 PLN00009 cyclin-dependent kina  99.9 1.3E-24 2.9E-29  215.9  17.6  169  329-501     2-177 (294)
319 cd05060 PTKc_Syk_like Catalyti  99.9 1.8E-24   4E-29  210.6  18.0  163  335-502     1-173 (257)
320 cd07837 STKc_CdkB_plant Cataly  99.9 1.4E-24 2.9E-29  215.3  17.1  169  329-501     1-185 (295)
321 cd05076 PTK_Tyk2_rpt1 Pseudoki  99.9 1.1E-24 2.4E-29  215.9  16.3  159  336-501     2-194 (274)
322 cd07852 STKc_MAPK15 Catalytic   99.9 7.2E-25 1.6E-29  223.2  15.1  172  326-501     4-186 (337)
323 cd05078 PTK_Jak2_Jak3_rpt1 Pse  99.9 3.8E-25 8.3E-30  216.1  12.5  160  335-501     1-178 (258)
324 KOG0696 Serine/threonine prote  99.9 8.1E-26 1.8E-30  232.7   8.0  173  327-501   347-524 (683)
325 cd05110 PTKc_HER4 Catalytic do  99.9 1.2E-24 2.6E-29  218.4  16.3  169  329-502     7-186 (303)
326 cd07864 STKc_CDK12 Catalytic d  99.9 1.5E-24 3.2E-29  215.8  16.5  172  326-501     4-191 (302)
327 cd06607 STKc_TAO Catalytic dom  99.9 2.8E-24   6E-29  215.9  18.6  167  329-500    15-184 (307)
328 cd08225 STKc_Nek5 Catalytic do  99.9 1.8E-24 3.8E-29  209.2  16.3  170  330-502     1-177 (257)
329 cd07835 STKc_CDK1_like Catalyt  99.9 1.9E-24 4.1E-29  213.0  16.6  167  331-501     1-173 (283)
330 cd07877 STKc_p38alpha_MAPK14 C  99.9 2.1E-24 4.6E-29  221.5  17.6  172  325-501    13-191 (345)
331 cd06648 STKc_PAK_II Catalytic   99.9 2.8E-24 6.1E-29  213.9  17.8  167  331-502    21-190 (285)
332 cd05047 PTKc_Tie Catalytic dom  99.9 2.9E-24 6.3E-29  211.3  17.7  164  335-502     1-186 (270)
333 KOG0587 Traf2- and Nck-interac  99.9 1.5E-24 3.2E-29  239.3  17.2  169  326-500    16-196 (953)
334 cd08528 STKc_Nek10 Catalytic d  99.9 2.2E-24 4.9E-29  211.0  16.7  173  330-502     1-188 (269)
335 cd05611 STKc_Rim15_like Cataly  99.9 3.1E-24 6.6E-29  209.0  17.5  164  335-502     2-168 (260)
336 cd06614 STKc_PAK Catalytic dom  99.9 3.2E-24 6.9E-29  212.4  17.2  170  327-502    17-191 (286)
337 KOG0614 cGMP-dependent protein  99.9 2.7E-26 5.8E-31  240.9   2.2  173  328-502   419-594 (732)
338 cd07856 STKc_Sty1_Hog1 Catalyt  99.9 4.2E-24 9.2E-29  218.1  18.3  171  326-501     7-179 (328)
339 KOG0695 Serine/threonine prote  99.9 2.1E-25 4.5E-30  225.0   8.4  173  328-502   249-426 (593)
340 PTZ00024 cyclin-dependent prot  99.9 2.2E-24 4.7E-29  219.2  15.7  172  330-502     9-208 (335)
341 cd05583 STKc_MSK_N N-terminal   99.9 3.6E-24 7.9E-29  212.2  16.7  172  330-502     1-181 (288)
342 cd07834 STKc_MAPK Catalytic do  99.9 1.7E-24 3.6E-29  219.0  14.5  169  330-502     1-181 (330)
343 KOG1094 Discoidin domain recep  99.9 3.5E-24 7.6E-29  227.9  17.4  171  329-503   538-716 (807)
344 cd05058 PTKc_Met_Ron Catalytic  99.9 4.7E-24   1E-28  207.5  16.6  164  335-502     1-177 (262)
345 KOG1151 Tousled-like protein k  99.9 3.5E-25 7.5E-30  229.5   9.0  176  325-500   459-653 (775)
346 cd07866 STKc_BUR1 Catalytic do  99.9 2.7E-24 5.8E-29  214.1  14.7  170  328-501     7-200 (311)
347 cd07831 STKc_MOK Catalytic dom  99.9 5.3E-24 1.2E-28  209.0  16.6  164  331-500     1-171 (282)
348 cd07830 STKc_MAK_like Catalyti  99.9 5.2E-24 1.1E-28  209.5  16.4  166  331-501     1-172 (283)
349 PHA03390 pk1 serine/threonine-  99.9   7E-24 1.5E-28  209.4  17.2  163  328-502    13-181 (267)
350 cd06657 STKc_PAK4 Catalytic do  99.9   3E-24 6.5E-29  215.2  14.7  166  331-501    22-190 (292)
351 cd07855 STKc_ERK5 Catalytic do  99.9 2.4E-24 5.3E-29  219.4  14.1  170  328-501     4-185 (334)
352 cd07858 STKc_TEY_MAPK_plant Ca  99.9 3.6E-24 7.9E-29  218.6  15.1  171  327-501     3-182 (337)
353 cd08222 STKc_Nek11 Catalytic d  99.9 3.6E-24 7.7E-29  208.5  14.2  171  330-501     1-179 (260)
354 PHA02882 putative serine/threo  99.9   1E-23 2.2E-28  211.3  17.4  173  329-502    12-208 (294)
355 cd07854 STKc_MAPK4_6 Catalytic  99.9 5.6E-24 1.2E-28  217.9  15.6  168  328-501     4-192 (342)
356 cd07851 STKc_p38 Catalytic dom  99.9 4.6E-24 9.9E-29  218.7  14.8  171  326-501    12-189 (343)
357 cd05118 STKc_CMGC Catalytic do  99.9 7.4E-24 1.6E-28  207.7  15.7  168  331-502     1-173 (283)
358 cd05044 PTKc_c-ros Catalytic d  99.9   5E-24 1.1E-28  208.2  14.3  164  335-502     1-188 (269)
359 cd05123 STKc_AGC Catalytic dom  99.9 1.1E-23 2.4E-28  202.8  16.4  164  337-502     1-168 (250)
360 cd06616 PKc_MKK4 Catalytic dom  99.9 6.9E-24 1.5E-28  209.9  15.3  168  330-502     5-182 (288)
361 cd07829 STKc_CDK_like Catalyti  99.9 5.4E-24 1.2E-28  208.6  14.3  168  331-502     1-173 (282)
362 cd07857 STKc_MPK1 Catalytic do  99.9   8E-24 1.7E-28  215.4  16.1  168  330-501     1-183 (332)
363 cd06635 STKc_TAO1 Catalytic do  99.9 1.9E-23 4.2E-28  211.2  18.5  167  329-500    25-194 (317)
364 cd05074 PTKc_Tyro3 Catalytic d  99.9 1.2E-23 2.6E-28  205.9  16.3  169  331-502     1-190 (273)
365 cd07838 STKc_CDK4_6_like Catal  99.9 2.4E-23 5.3E-28  204.5  18.4  168  331-502     1-181 (287)
366 cd08226 PK_STRAD_beta Pseudoki  99.9 1.1E-23 2.3E-28  214.1  16.2  165  335-502     4-183 (328)
367 cd08216 PK_STRAD Pseudokinase   99.9 1.1E-23 2.4E-28  211.3  15.6  168  331-502     4-183 (314)
368 KOG0604 MAP kinase-activated p  99.9 9.6E-25 2.1E-29  217.8   7.8  165  327-501    59-237 (400)
369 cd06633 STKc_TAO3 Catalytic do  99.9 3.1E-23 6.7E-28  209.7  18.5  166  330-500    22-190 (313)
370 cd07879 STKc_p38delta_MAPK13 C  99.9 1.5E-23 3.3E-28  214.7  16.3  170  326-501    12-188 (342)
371 KOG2345 Serine/threonine prote  99.9 5.1E-24 1.1E-28  208.2  11.6  175  323-502    15-213 (302)
372 KOG1026 Nerve growth factor re  99.9   4E-24 8.6E-29  236.2  11.3  171  329-503   486-682 (774)
373 KOG1095 Protein tyrosine kinas  99.9 1.2E-23 2.6E-28  239.2  14.4  169  330-502   693-879 (1025)
374 cd06618 PKc_MKK7 Catalytic dom  99.9 6.4E-23 1.4E-27  204.7  16.7  172  326-502    12-189 (296)
375 cd06634 STKc_TAO2 Catalytic do  99.9 5.6E-23 1.2E-27  207.1  15.7  167  329-500    15-184 (308)
376 cd05576 STKc_RPK118_like Catal  99.9 1.1E-22 2.3E-27  197.3  15.3  152  340-502     4-157 (237)
377 KOG0664 Nemo-like MAPK-related  99.9   1E-24 2.2E-29  215.4  -0.4  169  330-502    54-232 (449)
378 KOG0576 Mitogen-activated prot  99.9 2.3E-24   5E-29  232.2   1.5  168  327-499    13-184 (829)
379 KOG0669 Cyclin T-dependent kin  99.9 9.1E-25   2E-29  213.9  -2.3  172  326-501    14-202 (376)
380 PLN03224 probable serine/threo  99.9 3.8E-22 8.2E-27  216.7  17.1  174  328-501   144-384 (507)
381 smart00221 STYKc Protein kinas  99.9 6.9E-22 1.5E-26  185.9  16.6  165  331-499     1-171 (225)
382 KOG0984 Mitogen-activated prot  99.9 9.1E-23   2E-27  195.2  10.5  168  330-502    47-223 (282)
383 PLN03225 Serine/threonine-prot  99.9 1.9E-22 4.1E-27  222.1  14.6  165  327-500   130-330 (566)
384 KOG0983 Mitogen-activated prot  99.9 1.9E-22 4.2E-27  199.5  13.0  175  322-501    85-265 (391)
385 cd00180 PKc Catalytic domain o  99.9 1.6E-21 3.4E-26  178.6  17.8  161  337-501     1-167 (215)
386 cd05147 RIO1_euk RIO kinase fa  99.9   5E-22 1.1E-26  189.7  14.2  144  334-480     2-168 (190)
387 cd05145 RIO1_like RIO kinase f  99.9 1.3E-21 2.8E-26  185.9  16.2  145  334-481     2-169 (190)
388 KOG4278 Protein tyrosine kinas  99.9 1.9E-22   4E-27  215.6  10.0  171  324-500   262-439 (1157)
389 PLN00113 leucine-rich repeat r  99.9 7.7E-22 1.7E-26  228.2  15.6  162  327-502   688-853 (968)
390 KOG4257 Focal adhesion tyrosin  99.9 8.1E-22 1.8E-26  211.1  12.1  166  330-500   390-565 (974)
391 KOG0671 LAMMER dual specificit  99.9 8.6E-22 1.9E-26  201.8  11.3  167  327-501    87-283 (415)
392 smart00220 S_TKc Serine/Threon  99.9   4E-21 8.7E-26  181.4  14.7  157  341-501     1-160 (244)
393 KOG1006 Mitogen-activated prot  99.9 1.9E-22   4E-27  198.9   3.6  167  330-501    65-241 (361)
394 KOG0670 U4/U6-associated splic  99.9 1.3E-21 2.7E-26  206.4  10.0  168  328-502   431-610 (752)
395 KOG0196 Tyrosine kinase, EPH (  99.8 2.1E-21 4.6E-26  212.2  11.4  167  330-500   630-807 (996)
396 KOG0199 ACK and related non-re  99.8 1.9E-21   4E-26  210.4  10.4  170  327-501   108-289 (1039)
397 KOG0668 Casein kinase II, alph  99.8 9.3E-22   2E-26  190.7   6.7  163  328-500    37-205 (338)
398 KOG0603 Ribosomal protein S6 k  99.8 9.8E-21 2.1E-25  204.2  10.9  166  326-501   319-487 (612)
399 KOG1167 Serine/threonine prote  99.8 5.7E-21 1.2E-25  197.7   7.7  145  324-477    31-181 (418)
400 COG0515 SPS1 Serine/threonine   99.8 1.9E-19   4E-24  171.9  17.5  167  331-501     2-182 (384)
401 KOG0665 Jun-N-terminal kinase   99.8 6.3E-21 1.4E-25  192.0   6.8  168  328-501    16-191 (369)
402 KOG1027 Serine/threonine prote  99.8 1.5E-20 3.3E-25  207.0  10.3  162  331-502   511-689 (903)
403 PRK10345 hypothetical protein;  99.8 1.1E-19 2.4E-24  176.7  14.8  136  334-478     7-159 (210)
404 KOG0200 Fibroblast/platelet-de  99.8   1E-19 2.3E-24  202.1  14.6  174  324-501   291-495 (609)
405 KOG1165 Casein kinase (serine/  99.8   1E-19 2.2E-24  184.2  13.0  159  330-496    29-205 (449)
406 KOG1345 Serine/threonine kinas  99.8 1.7E-20 3.7E-25  185.6   7.1  167  327-500    22-193 (378)
407 KOG1290 Serine/threonine prote  99.8   2E-18 4.3E-23  181.6  19.1  130  329-465    78-224 (590)
408 KOG1164 Casein kinase (serine/  99.8 8.2E-19 1.8E-23  179.9  15.8  166  330-501    19-211 (322)
409 smart00090 RIO RIO-like kinase  99.8 5.1E-19 1.1E-23  174.9  13.3  146  330-480    29-199 (237)
410 KOG1163 Casein kinase (serine/  99.8 6.7E-19 1.4E-23  172.0  13.6  162  327-496    13-190 (341)
411 PRK14879 serine/threonine prot  99.8   1E-18 2.2E-23  166.5  14.6  139  335-478     2-143 (211)
412 PRK12274 serine/threonine prot  99.8 1.2E-18 2.5E-23  169.6  14.3  137  332-480     5-143 (218)
413 KOG1025 Epidermal growth facto  99.8 1.1E-19 2.4E-24  199.5   7.2  167  330-501   697-874 (1177)
414 TIGR03724 arch_bud32 Kae1-asso  99.8 2.2E-18 4.8E-23  163.0  13.4  136  336-479     1-139 (199)
415 PRK10359 lipopolysaccharide co  99.8 2.8E-18   6E-23  169.2  14.2  142  327-479    29-184 (232)
416 cd05144 RIO2_C RIO kinase fami  99.8 2.9E-18 6.4E-23  163.2  12.9  143  330-481    16-177 (198)
417 PRK09605 bifunctional UGMP fam  99.8 5.9E-18 1.3E-22  185.2  15.3  141  330-479   334-477 (535)
418 cd05119 RIO RIO kinase family,  99.7 8.1E-17 1.8E-21  150.6  13.0  142  334-481     2-166 (187)
419 PRK01723 3-deoxy-D-manno-octul  99.7 3.3E-16 7.2E-21  154.9  14.3  142  334-480    36-193 (239)
420 cd05120 APH_ChoK_like Aminogly  99.7   5E-16 1.1E-20  136.4  11.7  132  333-478     2-138 (155)
421 KOG1166 Mitotic checkpoint ser  99.7 3.5E-16 7.6E-21  178.5  11.5  178  320-502   689-878 (974)
422 KOG0590 Checkpoint kinase and   99.6 2.3E-16   5E-21  174.9   7.7  171  332-503   321-500 (601)
423 PLN00181 protein SPA1-RELATED;  99.6 1.3E-16 2.7E-21  182.2   5.3  115  387-502    29-190 (793)
424 KOG0603 Ribosomal protein S6 k  99.6 3.7E-17 7.9E-22  176.7  -0.5  162  336-502     1-168 (612)
425 KOG4158 BRPK/PTEN-induced prot  99.5 1.7E-14 3.7E-19  149.3   7.3  174  326-500   154-424 (598)
426 TIGR01982 UbiB 2-polyprenylphe  99.5 1.6E-13 3.5E-18  147.2  13.0  145  335-480   123-308 (437)
427 KOG1024 Receptor-like protein   99.5 4.7E-14   1E-18  145.7   6.2  170  329-502   284-473 (563)
428 PF14531 Kinase-like:  Kinase-l  99.5 5.3E-13 1.2E-17  135.6  12.8  167  330-500    13-215 (288)
429 PRK04750 ubiB putative ubiquin  99.4   2E-13 4.3E-18  149.5   7.8  146  327-480   118-315 (537)
430 cd05151 ChoK Choline Kinase (C  99.4 1.2E-12 2.5E-17  120.0   9.2  128  334-478     3-136 (170)
431 cd05146 RIO3_euk RIO kinase fa  99.4 5.3E-12 1.2E-16  121.9  13.7  142  334-480     2-175 (197)
432 KOG1240 Protein kinase contain  99.4 1.7E-13 3.8E-18  155.3   2.6  168  330-501    24-201 (1431)
433 smart00750 KIND kinase non-cat  99.2 2.1E-11 4.6E-16  112.3   8.0   77  415-502     1-79  (176)
434 cd05154 ACAD10_11_like Acyl-Co  99.2   6E-11 1.3E-15  112.7  10.7  140  335-478     4-206 (223)
435 KOG0590 Checkpoint kinase and   99.2 1.6E-12 3.5E-17  144.5  -1.0  170  329-501    20-203 (601)
436 COG3642 Mn2+-dependent serine/  99.2 1.7E-10 3.6E-15  110.1  12.8  137  335-479     2-141 (204)
437 PF01163 RIO1:  RIO1 family;  I  99.1   5E-10 1.1E-14  107.5  12.5  131  344-480     1-157 (188)
438 KOG0606 Microtubule-associated  99.1 5.3E-11 1.1E-15  135.3   4.5  135  326-502    80-233 (1205)
439 KOG3087 Serine/threonine prote  99.1 1.9E-09 4.1E-14  103.0  12.7  146  333-479    11-166 (229)
440 KOG0195 Integrin-linked kinase  99.0   7E-11 1.5E-15  117.9   2.7  164  330-502   191-361 (448)
441 KOG1033 eIF-2alpha kinase PEK/  99.0 1.8E-10 3.8E-15  123.3   3.5   97  403-502   329-437 (516)
442 PRK15123 lipopolysaccharide co  99.0 1.1E-08 2.5E-13  103.3  14.9  141  337-478    30-194 (268)
443 COG0478 RIO-like serine/threon  98.9 8.5E-09 1.8E-13  103.7  11.1  141  331-479    93-252 (304)
444 KOG0601 Cyclin-dependent kinas  98.9 9.6E-10 2.1E-14  119.2   4.3  169  330-502   115-303 (524)
445 KOG1023 Natriuretic peptide re  98.9   2E-09 4.4E-14  116.2   5.7  119  384-502     1-126 (484)
446 KOG1243 Protein kinase [Genera  98.8 2.2E-08 4.8E-13  110.2  11.8  119  351-478    35-154 (690)
447 PF06293 Kdo:  Lipopolysacchari  98.8 2.9E-08 6.3E-13   96.0  11.2  106  375-480    56-172 (206)
448 KOG0601 Cyclin-dependent kinas  98.8 6.1E-09 1.3E-13  113.0   6.6  152  324-478   260-416 (524)
449 PRK09902 hypothetical protein;  98.6 2.8E-07 6.1E-12   90.2  11.5  141  337-478    26-179 (216)
450 COG0661 AarF Predicted unusual  98.6 1.1E-07 2.3E-12  104.2   9.2  144  335-480   131-316 (517)
451 COG1718 RIO1 Serine/threonine   98.6 4.4E-07 9.5E-12   90.6  12.7  140  336-480    55-217 (268)
452 KOG3741 Poly(A) ribonuclease s  98.5 6.5E-07 1.4E-11   96.5  12.2  135  343-482   290-446 (655)
453 KOG1235 Predicted unusual prot  98.4 1.3E-06 2.8E-11   95.9  11.9  142  335-480   167-356 (538)
454 PF06176 WaaY:  Lipopolysacchar  98.4 4.5E-06 9.8E-11   82.3  13.1  139  329-478    31-183 (229)
455 PF01636 APH:  Phosphotransfera  98.4 4.4E-06 9.4E-11   79.3  12.4  137  334-478     2-197 (239)
456 KOG1266 Protein kinase [Signal  98.4 3.4E-07 7.3E-12   94.0   5.0   93  379-471   116-220 (458)
457 TIGR02172 Fb_sc_TIGR02172 Fibr  98.3 7.4E-06 1.6E-10   80.7  12.2  133  335-478     7-182 (226)
458 cd05150 APH Aminoglycoside 3'-  98.3 7.2E-06 1.6E-10   80.4  12.0  132  337-477     6-192 (244)
459 KOG0606 Microtubule-associated  98.2 3.6E-07 7.9E-12  104.7   1.1  151  324-476   799-951 (1205)
460 PF10707 YrbL-PhoP_reg:  PhoP r  98.1 4.7E-05   1E-09   73.9  13.6  137  335-477     7-171 (199)
461 COG2112 Predicted Ser/Thr prot  98.0 3.3E-05 7.3E-10   73.8   8.9  129  332-478    25-155 (201)
462 PF12260 PIP49_C:  Protein-kina  98.0 2.8E-05 6.1E-10   74.7   8.4   95  379-477     8-110 (188)
463 PLN02876 acyl-CoA dehydrogenas  97.9 8.4E-05 1.8E-09   86.2  13.4   79  334-416    43-130 (822)
464 cd05155 APH_ChoK_like_1 Unchar  97.9 5.6E-05 1.2E-09   74.0  10.2   72  335-417     3-81  (235)
465 KOG2268 Serine/threonine prote  97.9 7.8E-06 1.7E-10   84.6   4.1  138  331-477    94-250 (465)
466 PF13095 FTA2:  Kinetochore Sim  97.9  0.0003 6.5E-09   68.7  14.2  131  328-476    36-206 (207)
467 KOG2270 Serine/threonine prote  97.8 0.00012 2.7E-09   76.9  11.3  144  333-479   148-314 (520)
468 KOG0576 Mitogen-activated prot  97.7 1.1E-05 2.4E-10   89.1   0.9  162  325-501   238-404 (829)
469 cd05157 ETNK_euk Ethanolamine   97.6 0.00067 1.4E-08   65.9  11.5   74  334-417     3-79  (235)
470 PRK10593 hypothetical protein;  97.5  0.0013 2.8E-08   67.4  12.7   76  334-417    19-100 (297)
471 PRK09550 mtnK methylthioribose  97.5  0.0017 3.6E-08   69.6  13.9   80  335-416    32-117 (401)
472 TIGR00938 thrB_alt homoserine   97.4  0.0016 3.4E-08   66.4  11.9  137  333-477    26-216 (307)
473 TIGR02721 ycfN_thiK thiamine k  97.4 0.00079 1.7E-08   66.7   9.0  131  337-478     4-175 (256)
474 PRK05231 homoserine kinase; Pr  97.2  0.0078 1.7E-07   61.4  14.6   30  448-477   187-216 (319)
475 cd05153 HomoserineK_II Homoser  97.2  0.0037   8E-08   62.9  11.7  135  334-477    19-204 (296)
476 cd05156 ChoK_euk Choline Kinas  97.1  0.0028 6.1E-08   64.1  10.5   73  335-417     4-84  (302)
477 COG4248 Uncharacterized protei  96.9  0.0049 1.1E-07   66.0  10.3  159  332-500    14-189 (637)
478 cd05152 MPH2' Macrolide 2'-Pho  96.9  0.0069 1.5E-07   61.5  10.6   30  449-478   186-216 (276)
479 TIGR01767 MTRK 5-methylthiorib  96.5   0.012 2.6E-07   62.3   9.6   78  336-415     2-85  (370)
480 KOG2137 Protein kinase [Signal  96.5  0.0011 2.4E-08   74.1   1.9   65  437-501   107-183 (700)
481 TIGR02906 spore_CotS spore coa  96.5   0.058 1.3E-06   54.5  13.9   29  448-477   187-215 (313)
482 TIGR02904 spore_ysxE spore coa  96.4   0.039 8.4E-07   56.5  12.4   30  449-478   197-226 (309)
483 PLN02756 S-methyl-5-thioribose  96.3   0.061 1.3E-06   57.9  13.3   78  334-414    37-119 (418)
484 PLN02421 phosphotransferase, a  96.2   0.028 6.1E-07   58.4  10.0   29  450-478   184-213 (330)
485 PLN02236 choline kinase         96.2   0.049 1.1E-06   57.0  11.7  135  334-478    41-231 (344)
486 PRK12396 5-methylribose kinase  95.9   0.027 5.8E-07   60.4   8.2   80  334-415    34-118 (409)
487 PRK06148 hypothetical protein;  95.7   0.089 1.9E-06   62.8  12.7   31  448-478   203-236 (1013)
488 COG3173 Predicted aminoglycosi  95.7    0.11 2.3E-06   54.3  11.7   30  449-478   199-228 (321)
489 PF03881 Fructosamin_kin:  Fruc  95.6    0.11 2.4E-06   53.3  11.0   74  333-415    21-97  (288)
490 COG5072 ALK1 Serine/threonine   95.5   0.039 8.5E-07   58.5   7.4   74  401-479   297-371 (488)
491 PF02958 EcKinase:  Ecdysteroid  95.3   0.057 1.2E-06   54.4   8.1   29  450-478   217-250 (294)
492 PRK11768 serine/threonine prot  95.2     0.5 1.1E-05   49.0  14.5   28  448-477   196-223 (325)
493 PTZ00384 choline kinase; Provi  94.4    0.28 6.2E-06   52.3  10.7   79  334-417    55-136 (383)
494 COG3001 Uncharacterized protei  94.2    0.27 5.8E-06   49.5   9.1   68  343-418    27-99  (286)
495 KOG1035 eIF-2alpha kinase GCN2  94.1    0.34 7.4E-06   57.8  11.1  163  337-501   186-364 (1351)
496 PF07387 Seadorna_VP7:  Seadorn  93.6    0.34 7.4E-06   48.6   8.5   84  376-475   104-189 (308)
497 KOG1826 Ras GTPase activating   93.3   0.026 5.7E-07   68.5   0.2  124  377-500  1276-1413(2724)
498 KOG1236 Predicted unusual prot  91.3    0.59 1.3E-05   50.6   7.4   60  404-463   319-379 (565)
499 PHA00451 protein kinase         91.1    0.34 7.4E-06   49.3   5.1  125  335-472    71-212 (362)
500 PF04655 APH_6_hur:  Aminoglyco  91.1    0.89 1.9E-05   45.9   8.2   75  335-421     8-86  (253)

No 1  
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00  E-value=4.6e-37  Score=315.63  Aligned_cols=172  Identities=29%  Similarity=0.534  Sum_probs=154.3

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ....+|.+.+.||+|+|++||+|+. .++..||||.+.....   .+...+.+..||.+|+.++|||||.+++++..++.
T Consensus         7 ~~~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l---~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~   83 (429)
T KOG0595|consen    7 RVVGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKL---NKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDF   83 (429)
T ss_pred             cccccceehhhccCcceEEEEEeEeccCCceEEeeeehhhcc---CHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCe
Confidence            4567899999999999999999998 6789999999865432   23445678899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC------CcEEEEecCccc
Q 010676          405 LYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN------GSVKLADFGLAK  477 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~------g~VKL~DFGLA~  477 (504)
                      +|||||||.||+|..+++.. .+++..++.++.||+.||++||+++||||||||+||||+..      -.+||+|||||+
T Consensus        84 i~lVMEyC~gGDLs~yi~~~~~l~e~t~r~Fm~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR  163 (429)
T KOG0595|consen   84 IYLVMEYCNGGDLSDYIRRRGRLPEATARHFMQQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR  163 (429)
T ss_pred             EEEEEEeCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence            99999999999999999876 69999999999999999999999999999999999999865      358999999999


Q ss_pred             ccccCC-cccccCCCccccccccc
Q 010676          478 ATKLND-VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       478 ~~~~~~-~~s~~GT~~YmAPEVL~  500 (504)
                      ....+. ..+.||++.||||||++
T Consensus       164 ~L~~~~~a~tlcGSplYMAPEV~~  187 (429)
T KOG0595|consen  164 FLQPGSMAETLCGSPLYMAPEVIM  187 (429)
T ss_pred             hCCchhHHHHhhCCccccCHHHHH
Confidence            887665 45678999999999994


No 2  
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00  E-value=7.7e-36  Score=303.71  Aligned_cols=174  Identities=31%  Similarity=0.502  Sum_probs=155.4

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      -.+.|+++++||+|+||.||+++. .+++.||+|++++...  .......+...|..+|..++||+||+++..|++...+
T Consensus        23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~i--v~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kL  100 (357)
T KOG0598|consen   23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKI--VEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKL  100 (357)
T ss_pred             ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHh--hhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeE
Confidence            357899999999999999999988 6899999998865433  2334567889999999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc-cC-
Q 010676          406 YIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK-LN-  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~-~~-  482 (504)
                      |||+||+.||.|..++++ ..+++..++.|+.+|+.||.|||++|||||||||+||||+.+|+++|+|||||+..- .+ 
T Consensus       101 ylVld~~~GGeLf~hL~~eg~F~E~~arfYlaEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~  180 (357)
T KOG0598|consen  101 YLVLDYLNGGELFYHLQREGRFSEDRARFYLAEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGD  180 (357)
T ss_pred             EEEEeccCCccHHHHHHhcCCcchhHHHHHHHHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCC
Confidence            999999999999998875 569999999999999999999999999999999999999999999999999998533 32 


Q ss_pred             CcccccCCCcccccccccCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ...+.|||+.|||||++.++
T Consensus       181 ~t~tfcGT~eYmAPEil~~~  200 (357)
T KOG0598|consen  181 ATRTFCGTPEYMAPEILLGK  200 (357)
T ss_pred             ccccccCCccccChHHHhcC
Confidence            35567999999999999865


No 3  
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=9.9e-36  Score=305.91  Aligned_cols=178  Identities=30%  Similarity=0.427  Sum_probs=154.4

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhh--HHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQA--KQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~--~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      .+.+.|.+.+.||+|+||.|-+|.. .+|+.||||++.........  ......+.+|+++|++|+|||||+++++|...
T Consensus       169 s~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~  248 (475)
T KOG0615|consen  169 SFNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVP  248 (475)
T ss_pred             hhcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecC
Confidence            4667899999999999999999998 79999999999764433322  12223467999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC---CcEEEEecCcccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN---GSVKLADFGLAKA  478 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~-~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~---g~VKL~DFGLA~~  478 (504)
                      +..||||||+.||+|.+.+- +..+.+..-+.|++||+.||.|||++||+||||||+|||+..+   ..+||+|||+|+.
T Consensus       249 ds~YmVlE~v~GGeLfd~vv~nk~l~ed~~K~~f~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~  328 (475)
T KOG0615|consen  249 DSSYMVLEYVEGGELFDKVVANKYLREDLGKLLFKQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKV  328 (475)
T ss_pred             CceEEEEEEecCccHHHHHHhccccccchhHHHHHHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhc
Confidence            99999999999999998664 4558888889999999999999999999999999999999866   6799999999998


Q ss_pred             cccC-CcccccCCCcccccccccCCC
Q 010676          479 TKLN-DVKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       479 ~~~~-~~~s~~GT~~YmAPEVL~g~~  503 (504)
                      .... -+.+.||||.|.|||||.++-
T Consensus       329 ~g~~sfm~TlCGTpsYvAPEVl~~kg  354 (475)
T KOG0615|consen  329 SGEGSFMKTLCGTPSYVAPEVLASKG  354 (475)
T ss_pred             cccceehhhhcCCccccChhheecCC
Confidence            7543 367889999999999998763


No 4  
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.6e-34  Score=308.51  Aligned_cols=172  Identities=36%  Similarity=0.606  Sum_probs=155.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .+|..+++||+|||+.||++++ .+|..||+|++.......  ....+++.+||+|.+.|+|||||+++++|++.+++||
T Consensus        18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k--~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYi   95 (592)
T KOG0575|consen   18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKK--PKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYI   95 (592)
T ss_pred             ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcC--cchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEE
Confidence            5699999999999999999999 899999999997533322  2334678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Cc
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~  484 (504)
                      |+|+|..++|..++++ +.+++.++++|++||+.||.|||+++|||||||..||||+++.+|||+|||||......  ..
T Consensus        96 vLELC~~~sL~el~Krrk~ltEpEary~l~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk  175 (592)
T KOG0575|consen   96 VLELCHRGSLMELLKRRKPLTEPEARYFLRQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERK  175 (592)
T ss_pred             EEEecCCccHHHHHHhcCCCCcHHHHHHHHHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCccccc
Confidence            9999999999999875 45999999999999999999999999999999999999999999999999999876643  35


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      .+.||||.|.||||+...
T Consensus       176 ~TlCGTPNYIAPEVl~k~  193 (592)
T KOG0575|consen  176 KTLCGTPNYIAPEVLNKS  193 (592)
T ss_pred             ceecCCCcccChhHhccC
Confidence            678899999999999853


No 5  
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00  E-value=3.1e-34  Score=285.06  Aligned_cols=172  Identities=31%  Similarity=0.536  Sum_probs=156.4

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      +++|++++.||.|+||.|.+++. .+|..||+|++.+.+  ......+++..+|..+|+.+.||+++++++.|.+.+.+|
T Consensus        43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~--vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~ly  120 (355)
T KOG0616|consen   43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQK--VVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLY  120 (355)
T ss_pred             hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHH--HHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEE
Confidence            56899999999999999999998 689999999886433  233445678889999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      |||||++||.|..++++. +|++..++.|+.||+.||+|||+++|++|||||+|||||.+|.+||+|||+|+..... .-
T Consensus       121 mvmeyv~GGElFS~Lrk~~rF~e~~arFYAAeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r-T~  199 (355)
T KOG0616|consen  121 MVMEYVPGGELFSYLRKSGRFSEPHARFYAAEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR-TW  199 (355)
T ss_pred             EEEeccCCccHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCc-EE
Confidence            999999999999999874 5999999999999999999999999999999999999999999999999999987766 55


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      +.||||.|+|||++..+
T Consensus       200 TlCGTPeYLAPEii~sk  216 (355)
T KOG0616|consen  200 TLCGTPEYLAPEIIQSK  216 (355)
T ss_pred             EecCCccccChHHhhcC
Confidence            67899999999999865


No 6  
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00  E-value=1.3e-33  Score=287.59  Aligned_cols=173  Identities=29%  Similarity=0.476  Sum_probs=154.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ....+.+.++.||+|..|+||++.+ .++..+|+|.+....    .....+++.+|+++|+.++|||||.+|++|..+..
T Consensus        76 i~~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~----~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~  151 (364)
T KOG0581|consen   76 ISLSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNI----DPALQKQILRELEILRSCQSPYIVGFYGAFYSNGE  151 (364)
T ss_pred             cCHHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccC----CHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCc
Confidence            3445677789999999999999998 689999999985422    23445778999999999999999999999999994


Q ss_pred             -EEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          405 -LYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       405 -lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                       ++|+||||++|+|..++.. +.+++..+..++.++++||.|||+ ++||||||||+||||+.+|.|||||||.++.+..
T Consensus       152 ~isI~mEYMDgGSLd~~~k~~g~i~E~~L~~ia~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvn  231 (364)
T KOG0581|consen  152 EISICMEYMDGGSLDDILKRVGRIPEPVLGKIARAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVN  231 (364)
T ss_pred             eEEeehhhcCCCCHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhh
Confidence             9999999999999999876 569999999999999999999995 9999999999999999999999999999988776


Q ss_pred             CCcccccCCCcccccccccCC
Q 010676          482 NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ....+++||..|||||-+.|.
T Consensus       232 S~a~tfvGT~~YMsPERi~g~  252 (364)
T KOG0581|consen  232 SIANTFVGTSAYMSPERISGE  252 (364)
T ss_pred             hhcccccccccccChhhhcCC
Confidence            667788999999999999885


No 7  
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=1.1e-33  Score=296.59  Aligned_cols=177  Identities=31%  Similarity=0.509  Sum_probs=154.2

Q ss_pred             ccccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeec
Q 010676          322 GRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDK  400 (504)
Q Consensus       322 ~~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~  400 (504)
                      +.+.+..+.|+.+++||+|+||.||+|++ .+|+.||+|.+......   .....-..+||.||++|+||||++|.+...
T Consensus       110 ~w~~r~~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~---~~~~~t~~REI~ILr~l~HpNIikL~eivt  186 (560)
T KOG0600|consen  110 GWGPRRADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEK---EGFPITAIREIKILRRLDHPNIIKLEEIVT  186 (560)
T ss_pred             cccccchHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCC---CcchHHHHHHHHHHHhcCCCcccceeeEEE
Confidence            45566778899999999999999999998 79999999998764422   223345679999999999999999999876


Q ss_pred             CC--CeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          401 DE--SKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       401 ~~--~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                      ..  ..+|||+|||+. +|.-++...  +|++.++++|++||+.||+|||++||+|||||.+|||||.+|.+||+|||||
T Consensus       187 ~~~~~siYlVFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLA  265 (560)
T KOG0600|consen  187 SKLSGSIYLVFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLA  265 (560)
T ss_pred             ecCCceEEEEEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccce
Confidence            65  689999999987 788887765  5999999999999999999999999999999999999999999999999999


Q ss_pred             cccccCC---cccccCCCcccccccccCC
Q 010676          477 KATKLND---VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       477 ~~~~~~~---~~s~~GT~~YmAPEVL~g~  502 (504)
                      +++....   .+..+-|.||+|||+|.|.
T Consensus       266 r~y~~~~~~~~T~rVvTLWYRpPELLLG~  294 (560)
T KOG0600|consen  266 RFYTPSGSAPYTSRVVTLWYRPPELLLGA  294 (560)
T ss_pred             eeccCCCCcccccceEEeeccChHHhcCC
Confidence            9766543   5667789999999999874


No 8  
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00  E-value=1.2e-32  Score=288.34  Aligned_cols=178  Identities=31%  Similarity=0.490  Sum_probs=155.1

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCC
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDES  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~  403 (504)
                      ...+.|.+++.||+|+||.||+|.+ .++..||+|++...............+.+|+.+++.++ ||||++++.++.+..
T Consensus        14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~   93 (370)
T KOG0583|consen   14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT   93 (370)
T ss_pred             cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence            4567899999999999999999987 68899999976543211111123456678999999999 999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC-CcEEEEecCcccccc-
Q 010676          404 KLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATK-  480 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~-g~VKL~DFGLA~~~~-  480 (504)
                      .+|+||||+.||+|.+++.. ..+.+..+..+|+||+.||+|||++||+||||||+|||++.+ +++||+|||++.... 
T Consensus        94 ~~~ivmEy~~gGdL~~~i~~~g~l~E~~ar~~F~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~  173 (370)
T KOG0583|consen   94 KIYIVMEYCSGGDLFDYIVNKGRLKEDEARKYFRQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPG  173 (370)
T ss_pred             eEEEEEEecCCccHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCC
Confidence            99999999999999998877 669999999999999999999999999999999999999999 999999999998773 


Q ss_pred             -cCCcccccCCCcccccccccCCC
Q 010676          481 -LNDVKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       481 -~~~~~s~~GT~~YmAPEVL~g~~  503 (504)
                       .......|||+.|+|||+|.++.
T Consensus       174 ~~~~l~t~cGsp~Y~aPEvl~~~~  197 (370)
T KOG0583|consen  174 EDGLLKTFCGSPAYAAPEVLSGKG  197 (370)
T ss_pred             CCCcccCCCCCcccCCHHHhCCCC
Confidence             34467889999999999999853


No 9  
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00  E-value=2e-34  Score=284.96  Aligned_cols=174  Identities=35%  Similarity=0.557  Sum_probs=151.1

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEee-eecCCC
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYG-TDKDES  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~-~~~~~~  403 (504)
                      .....|++++.||+|+||.||++.. .+|..+|.|.+..   +.......+.+..|+.+|++|+|||||++++ .|..++
T Consensus        16 ~~l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f---~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~   92 (375)
T KOG0591|consen   16 KTLADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQF---GMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDN   92 (375)
T ss_pred             ccHHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcch---hhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccc
Confidence            4456899999999999999999998 7999999998763   2233444567889999999999999999998 566666


Q ss_pred             e-EEEEEEeccCCCHHHHHHhc-----CCChHHHHHHHHHHHHHHHHHHH--CC--ceecCCCCCcEEEcCCCcEEEEec
Q 010676          404 K-LYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHD--QD--VVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       404 ~-lyLVmEy~~ggsL~~ll~~~-----~l~e~~v~~i~~QIl~gL~yLHs--~g--IIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                      . ++||||||.+|+|.++++..     .+++..++.++.|++.||.++|.  ..  |+||||||.||+|+.+|.|||+||
T Consensus        93 evlnivmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDf  172 (375)
T KOG0591|consen   93 EVLNIVMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDF  172 (375)
T ss_pred             hhhHHHHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccc
Confidence            6 99999999999999988654     39999999999999999999998  44  999999999999999999999999


Q ss_pred             CcccccccCC--cccccCCCcccccccccCC
Q 010676          474 GLAKATKLND--VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~~--~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||++.+....  ..+.+|||+||+||++.+.
T Consensus       173 GL~r~l~s~~tfA~S~VGTPyYMSPE~i~~~  203 (375)
T KOG0591|consen  173 GLGRFLSSKTTFAHSLVGTPYYMSPERIHES  203 (375)
T ss_pred             hhHhHhcchhHHHHhhcCCCcccCHHHHhcC
Confidence            9999876544  4678899999999998754


No 10 
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00  E-value=1e-32  Score=291.21  Aligned_cols=150  Identities=27%  Similarity=0.506  Sum_probs=137.5

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      .-+++|+++++||+|+||.||+|+. .+|.+||+|++++...  .....+.++..|-.+|....+++||+||..|++..+
T Consensus       138 ~~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M--~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~  215 (550)
T KOG0605|consen  138 LSLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEM--LKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEY  215 (550)
T ss_pred             CCcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHH--HhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCe
Confidence            3467999999999999999999997 6899999999875443  334557889999999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          405 LYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      +||||||++||++..++.+. .|++..++.|+.+++.||..||++|+|||||||+|+|||..|++||+|||||.
T Consensus       216 LYLiMEylPGGD~mTLL~~~~~L~e~~arfYiaE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~  289 (550)
T KOG0605|consen  216 LYLIMEYLPGGDMMTLLMRKDTLTEDWARFYIAETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLST  289 (550)
T ss_pred             eEEEEEecCCccHHHHHHhcCcCchHHHHHHHHHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccc
Confidence            99999999999999988765 49999999999999999999999999999999999999999999999999984


No 11 
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00  E-value=2.1e-33  Score=279.83  Aligned_cols=170  Identities=28%  Similarity=0.441  Sum_probs=148.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.|+.+.++|+|+||+||++++ .+|+.||||.+.-.....   ...+-.++||++|++++|+|+|.++.+|.....+++
T Consensus         2 ekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~---~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhL   78 (396)
T KOG0593|consen    2 EKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDP---VVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHL   78 (396)
T ss_pred             cHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccH---HHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEE
Confidence            5688889999999999999999 689999999886433322   222345799999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc-c-CCc
Q 010676          408 FLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK-L-NDV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~-~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~-~-~~~  484 (504)
                      |+|||+..-|..+-. ..+++...++.|++|++.|+.|+|++++|||||||+||||+.+|.+||||||||+.+. . ...
T Consensus        79 VFE~~dhTvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~Y  158 (396)
T KOG0593|consen   79 VFEYCDHTVLHELERYPNGVPSELVKKYLYQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNY  158 (396)
T ss_pred             EeeecchHHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchh
Confidence            999999866655543 2469999999999999999999999999999999999999999999999999999765 3 346


Q ss_pred             ccccCCCcccccccccC
Q 010676          485 KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g  501 (504)
                      +.++.|.||+|||++-|
T Consensus       159 TDYVATRWYRaPELLvG  175 (396)
T KOG0593|consen  159 TDYVATRWYRAPELLVG  175 (396)
T ss_pred             hhhhhhhhccChhhhcc
Confidence            77889999999999876


No 12 
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.98  E-value=3.8e-32  Score=277.62  Aligned_cols=170  Identities=53%  Similarity=0.810  Sum_probs=148.5

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC--e
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES--K  404 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~--~  404 (504)
                      ...|..++.||+|+||.||++.+ .+|...|||.+......     ..+.+++|+.+|.+++|||||++++......  .
T Consensus        16 ~~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~-----~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~   90 (313)
T KOG0198|consen   16 ISNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSP-----TSESLEREIRILSRLNHPNIVQYYGSSSSRENDE   90 (313)
T ss_pred             cchhhhhccccCccceEEEEEEecCCCcceeeeeeecccch-----hHHHHHHHHHHHHhCCCCCEEeeCCccccccCee
Confidence            45788999999999999999998 45999999998754211     1567899999999999999999999754444  6


Q ss_pred             EEEEEEeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-CCcEEEEecCccccccc
Q 010676          405 LYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKL  481 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-~g~VKL~DFGLA~~~~~  481 (504)
                      ++|+|||+++|+|.+++.+.+  +++..++.|++||+.||.|||++|||||||||+||||+. ++.+||+|||+++....
T Consensus        91 ~~i~mEy~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~  170 (313)
T KOG0198|consen   91 YNIFMEYAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLES  170 (313)
T ss_pred             eEeeeeccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccc
Confidence            999999999999999998875  899999999999999999999999999999999999999 79999999999886552


Q ss_pred             -----CCcccccCCCcccccccccCC
Q 010676          482 -----NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 -----~~~~s~~GT~~YmAPEVL~g~  502 (504)
                           .......||+.|||||++.++
T Consensus       171 ~~~~~~~~~~~~Gtp~~maPEvi~~g  196 (313)
T KOG0198|consen  171 KGTKSDSELSVQGTPNYMAPEVIRNG  196 (313)
T ss_pred             ccccccccccccCCccccCchhhcCC
Confidence                 224467899999999999853


No 13 
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=99.98  E-value=5e-32  Score=282.62  Aligned_cols=171  Identities=37%  Similarity=0.568  Sum_probs=149.8

Q ss_pred             ccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC-eEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES-KLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-~ly  406 (504)
                      .....+.+.||+|+||+||+|.+.....||+|.+.........   ...|.+|+.+|.+++|||||++++++.... .++
T Consensus        40 ~~~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~---~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~  116 (362)
T KOG0192|consen   40 PDELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDES---RKAFRREASLLSRLRHPNIVQFYGACTSPPGSLC  116 (362)
T ss_pred             hHHhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHH---HHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceE
Confidence            3455666779999999999999976666999988754433322   678999999999999999999999999887 799


Q ss_pred             EEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCC-ceecCCCCCcEEEcCCC-cEEEEecCccccccc
Q 010676          407 IFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQD-VVHRDIKCANILVDANG-SVKLADFGLAKATKL  481 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~g-IIHRDLKP~NILLd~~g-~VKL~DFGLA~~~~~  481 (504)
                      |||||+++|+|..++..   ..++...+..|+.||+.||.|||+++ |||||||++||||+.++ ++||+|||+++....
T Consensus       117 iVtEy~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~  196 (362)
T KOG0192|consen  117 IVTEYMPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVI  196 (362)
T ss_pred             EEEEeCCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeecc
Confidence            99999999999999966   56999999999999999999999999 99999999999999998 999999999987654


Q ss_pred             --CCcccccCCCcccccccccC
Q 010676          482 --NDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       482 --~~~~s~~GT~~YmAPEVL~g  501 (504)
                        ...+...||+.|||||++.+
T Consensus       197 ~~~~~~~~~GT~~wMAPEv~~~  218 (362)
T KOG0192|consen  197 SKTSMTSVAGTYRWMAPEVLRG  218 (362)
T ss_pred             ccccccCCCCCccccChhhhcC
Confidence              34455689999999999985


No 14 
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=99.97  E-value=3.6e-32  Score=267.12  Aligned_cols=170  Identities=28%  Similarity=0.448  Sum_probs=148.9

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .+|...+.||+|.||+||+|++ .+|+.||||.+++.......   .....+||++|+.++|+||+.++++|...+.+.|
T Consensus         2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi---~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~l   78 (318)
T KOG0659|consen    2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGI---NRTALREIKLLQELKHPNIIELIDVFPHKSNLSL   78 (318)
T ss_pred             chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCc---cHHHHHHHHHHHHccCcchhhhhhhccCCCceEE
Confidence            4688889999999999999998 79999999999875433211   1345699999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |+||++. +|..+++...  +....++.|+.+++.||+|||.+.|+||||||.|+||+.+|.+||+|||+|+.+....  
T Consensus        79 VfEfm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~  157 (318)
T KOG0659|consen   79 VFEFMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRI  157 (318)
T ss_pred             EEEeccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcc
Confidence            9999986 8999887654  8889999999999999999999999999999999999999999999999999876444  


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      ....+-|.+|+|||+|.|.
T Consensus       158 ~~~~V~TRWYRAPELLfGs  176 (318)
T KOG0659|consen  158 QTHQVVTRWYRAPELLFGS  176 (318)
T ss_pred             cccceeeeeccChHHhccc
Confidence            3334789999999998763


No 15 
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=99.97  E-value=2.9e-32  Score=287.90  Aligned_cols=178  Identities=31%  Similarity=0.517  Sum_probs=154.2

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCC
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDE  402 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~  402 (504)
                      ++-..+|..++.||.|+|++||+|+. .+++.||||++.+..  ........-+..|-..|.+| .||.|++||..|+++
T Consensus        69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~--Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~  146 (604)
T KOG0592|consen   69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRY--IIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDE  146 (604)
T ss_pred             cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHH--HHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecc
Confidence            45567999999999999999999998 689999999875422  22223334566788888888 799999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      ..+|+|+||+++|+|.+++++.+ |++..+++|+.||+.||+|||++|||||||||+||||+.+|++||+|||.|+.+..
T Consensus       147 ~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YAAeIldAleylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~  226 (604)
T KOG0592|consen  147 ESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYAAEILDALEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSP  226 (604)
T ss_pred             cceEEEEEecCCCcHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCCh
Confidence            99999999999999999998865 99999999999999999999999999999999999999999999999999986532


Q ss_pred             CC---------------cccccCCCcccccccccCCCC
Q 010676          482 ND---------------VKSCRGTAFWMAPEVCSNPFV  504 (504)
Q Consensus       482 ~~---------------~~s~~GT~~YmAPEVL~g~~v  504 (504)
                      ..               ..+++||..|.+||+|..+++
T Consensus       227 ~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~  264 (604)
T KOG0592|consen  227 SQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPA  264 (604)
T ss_pred             hhccccCccCcccccCcccceeeeecccCHHHhcCCCC
Confidence            11               145789999999999998764


No 16 
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=5.6e-32  Score=292.08  Aligned_cols=177  Identities=27%  Similarity=0.463  Sum_probs=155.6

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCC
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDE  402 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~  402 (504)
                      +.-+++|.++++||+|+||+|+++.. .+++.||||.+++...  .....++.++.|-+|+.... ||++++++.+|++.
T Consensus       364 ~~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~I--l~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~  441 (694)
T KOG0694|consen  364 PLTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDI--LQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTK  441 (694)
T ss_pred             cccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccce--eccccHHHHHHHHHHHHHhccCCeEeecccccccC
Confidence            44567999999999999999999998 5788999999875433  33444677788888887775 99999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--  480 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--  480 (504)
                      +++|+||||+.||++..+.+...|++..+..|+..|+.||+|||++||||||||.+|||+|.+|++||+|||+|+...  
T Consensus       442 ~~l~fvmey~~Ggdm~~~~~~~~F~e~rarfyaAev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~  521 (694)
T KOG0694|consen  442 EHLFFVMEYVAGGDLMHHIHTDVFSEPRARFYAAEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQ  521 (694)
T ss_pred             CeEEEEEEecCCCcEEEEEecccccHHHHHHHHHHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCC
Confidence            999999999999996666666789999999999999999999999999999999999999999999999999999743  


Q ss_pred             cCCcccccCCCcccccccccCCC
Q 010676          481 LNDVKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       481 ~~~~~s~~GT~~YmAPEVL~g~~  503 (504)
                      .+...++||||.|||||+|.++-
T Consensus       522 g~~TsTfCGTpey~aPEil~e~~  544 (694)
T KOG0694|consen  522 GDRTSTFCGTPEFLAPEVLTEQS  544 (694)
T ss_pred             CCccccccCChhhcChhhhccCc
Confidence            34467789999999999998763


No 17 
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.4e-32  Score=286.57  Aligned_cols=171  Identities=29%  Similarity=0.450  Sum_probs=148.6

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCC
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDES  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~  403 (504)
                      .++++|.+++.||.|+||.||+|+. .++..||||.++..-..   .+..-. .+|+.-|++|+ |||||+|.+.+.+.+
T Consensus         7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s---~ee~~n-LREvksL~kln~hpniikL~Evi~d~~   82 (538)
T KOG0661|consen    7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYS---WEECMN-LREVKSLRKLNPHPNIIKLKEVIRDND   82 (538)
T ss_pred             hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhcc---HHHHHH-HHHHHHHHhcCCCCcchhhHHHhhccC
Confidence            4567899999999999999999998 68999999987643221   111222 48999999999 999999999998888


Q ss_pred             -eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          404 -KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       404 -~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                       .+|+|||||+. +|.++++..  .|++..+..|++||++||+|+|++|++||||||+||||..+..|||+|||||+.+.
T Consensus        83 ~~L~fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~  161 (538)
T KOG0661|consen   83 RILYFVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVR  161 (538)
T ss_pred             ceEeeeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccc
Confidence             99999999986 899998754  49999999999999999999999999999999999999989999999999999876


Q ss_pred             cC-CcccccCCCcccccccccC
Q 010676          481 LN-DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~-~~~s~~GT~~YmAPEVL~g  501 (504)
                      .. ..+.++.|.||+|||+|..
T Consensus       162 SkpPYTeYVSTRWYRAPEvLLr  183 (538)
T KOG0661|consen  162 SKPPYTEYVSTRWYRAPEVLLR  183 (538)
T ss_pred             cCCCcchhhhcccccchHHhhh
Confidence            54 4678899999999998864


No 18 
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=99.97  E-value=6.5e-32  Score=272.06  Aligned_cols=177  Identities=28%  Similarity=0.389  Sum_probs=151.6

Q ss_pred             ccccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeee-
Q 010676          322 GRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTD-  399 (504)
Q Consensus       322 ~~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~-  399 (504)
                      ....+-++.|+.++.|++|+||.||+|++ +++..||+|.++......-  .- -...+||.+|.+++|||||.+..+. 
T Consensus        69 l~gCrsv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~G--FP-ItsLREIniLl~~~H~NIV~vkEVVv  145 (419)
T KOG0663|consen   69 LGGCRSVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEG--FP-ITSLREINILLKARHPNIVEVKEVVV  145 (419)
T ss_pred             ccCcccHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCC--Cc-chhHHHHHHHHhcCCCCeeeeEEEEe
Confidence            44456678999999999999999999999 6899999999876543221  11 2345999999999999999997764 


Q ss_pred             -cCCCeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          400 -KDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       400 -~~~~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                       .+-+.+|||||||+. +|..++...  .|...+++.++.|++.||+|||.+.|+|||||++|+|+++.|.+||+|||||
T Consensus       146 G~~~d~iy~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLA  224 (419)
T KOG0663|consen  146 GSNMDKIYIVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLA  224 (419)
T ss_pred             ccccceeeeeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchh
Confidence             445679999999987 899988764  4899999999999999999999999999999999999999999999999999


Q ss_pred             cccccC--CcccccCCCcccccccccCC
Q 010676          477 KATKLN--DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       477 ~~~~~~--~~~s~~GT~~YmAPEVL~g~  502 (504)
                      +.+...  ..+..+-|.+|+|||+|.|.
T Consensus       225 R~ygsp~k~~T~lVVTLWYRaPELLLG~  252 (419)
T KOG0663|consen  225 REYGSPLKPYTPLVVTLWYRAPELLLGA  252 (419)
T ss_pred             hhhcCCcccCcceEEEeeecCHHHhcCC
Confidence            987654  35667799999999999874


No 19 
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=99.97  E-value=7.6e-32  Score=285.20  Aligned_cols=171  Identities=31%  Similarity=0.546  Sum_probs=154.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|.+.+.||+|+||+||+|+. .+.+.||+|.+.+..   ..+..+..+.+|++|++.++|||||.++++|++...+|+
T Consensus         2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~g---r~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~v   78 (808)
T KOG0597|consen    2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSG---RNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWV   78 (808)
T ss_pred             cchhHHHHhcCCccceeeecccccceeEEEEEEehhcC---CchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEE
Confidence            5788999999999999999998 588999999886433   234456789999999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      |+||+.| +|+.++.. +.++++.+..++.+++.||.|||+++|+|||+||.|||++.+|.+|+||||+|+....+.  .
T Consensus        79 Vte~a~g-~L~~il~~d~~lpEe~v~~~a~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vl  157 (808)
T KOG0597|consen   79 VTEYAVG-DLFTILEQDGKLPEEQVRAIAYDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVL  157 (808)
T ss_pred             Eehhhhh-hHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceee
Confidence            9999998 99998875 469999999999999999999999999999999999999999999999999999866554  4


Q ss_pred             ccccCCCcccccccccCCC
Q 010676          485 KSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~~  503 (504)
                      ++..|||.|||||++.++.
T Consensus       158 tsikGtPlYmAPElv~e~p  176 (808)
T KOG0597|consen  158 TSIKGTPLYMAPELVEEQP  176 (808)
T ss_pred             eeccCcccccCHHHHcCCC
Confidence            6678999999999998764


No 20 
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=99.97  E-value=1.1e-31  Score=275.13  Aligned_cols=182  Identities=26%  Similarity=0.480  Sum_probs=163.2

Q ss_pred             CCccccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeee
Q 010676          320 PNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGT  398 (504)
Q Consensus       320 p~~~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~  398 (504)
                      ....-+....+|++.+.||+|+||.|-+|.. ..|+.||||.+...  ....++.+-++.+||+|+..|+||||+.+|.+
T Consensus        44 rhhhkhnlkHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKd--kIkdeqDlvhIRREIeIMSsLNHPhII~IyEV  121 (668)
T KOG0611|consen   44 RHHHKHNLKHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKD--KIKDEQDLVHIRREIEIMSSLNHPHIIQIYEV  121 (668)
T ss_pred             ccCcccchhhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhh--hcccHHHHHHHHHHHHHHhhcCCCceeehhhh
Confidence            3333445566899999999999999999998 78999999987643  34557778899999999999999999999999


Q ss_pred             ecCCCeEEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          399 DKDESKLYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       399 ~~~~~~lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      |+..+.+.|||||..+|.|.+|+.+. .+++.++..+|+||++|+.|+|+++++|||||.+|||+|.|+++||+||||+.
T Consensus       122 FENkdKIvivMEYaS~GeLYDYiSer~~LsErEaRhfFRQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSN  201 (668)
T KOG0611|consen  122 FENKDKIVIVMEYASGGELYDYISERGSLSEREARHFFRQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSN  201 (668)
T ss_pred             hcCCceEEEEEEecCCccHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhh
Confidence            99999999999999999999999765 59999999999999999999999999999999999999999999999999998


Q ss_pred             ccccCC-cccccCCCcccccccccCCC
Q 010676          478 ATKLND-VKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       478 ~~~~~~-~~s~~GT~~YmAPEVL~g~~  503 (504)
                      .+.... ..++||++.|.+||+++|.-
T Consensus       202 ly~~~kfLqTFCGSPLYASPEIvNG~P  228 (668)
T KOG0611|consen  202 LYADKKFLQTFCGSPLYASPEIVNGTP  228 (668)
T ss_pred             hhccccHHHHhcCCcccCCccccCCCC
Confidence            766554 57889999999999999864


No 21 
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=99.97  E-value=2.6e-30  Score=266.97  Aligned_cols=172  Identities=28%  Similarity=0.492  Sum_probs=147.6

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||+||+|.+ .++..||+|++.....  ........+.+|+.++..++|+||+++++.+.+...+||
T Consensus         1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~l   78 (363)
T cd05628           1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADM--LEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYL   78 (363)
T ss_pred             CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEE
Confidence            3689999999999999999987 5789999998864321  123334678889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      ||||+++|+|.+++.+ ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......   
T Consensus        79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~  158 (363)
T cd05628          79 IMEFLPGGDMMTLLMKKDTLTEEETQFYIAETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTE  158 (363)
T ss_pred             EEcCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccc
Confidence            9999999999998865 458999999999999999999999999999999999999999999999999987532110   


Q ss_pred             ----------------------------------cccccCCCcccccccccCC
Q 010676          484 ----------------------------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ----------------------------------~~s~~GT~~YmAPEVL~g~  502 (504)
                                                        ....+||+.|||||++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  211 (363)
T cd05628         159 FYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQT  211 (363)
T ss_pred             ccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCC
Confidence                                              1234799999999998764


No 22 
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of 
Probab=99.97  E-value=4.2e-30  Score=266.50  Aligned_cols=147  Identities=27%  Similarity=0.518  Sum_probs=131.5

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++++.||+|+||.||++.+ .++..||||++.....  ........+.+|+.++..++||||+++++++.+.+.+|+
T Consensus         1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~l   78 (377)
T cd05629           1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEM--FKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYL   78 (377)
T ss_pred             CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHH--HHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEE
Confidence            3689999999999999999987 6889999998864221  123345678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      ||||+++|+|.+++... .+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++
T Consensus        79 v~E~~~gg~L~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~  149 (377)
T cd05629          79 IMEFLPGGDLMTMLIKYDTFSEDVTRFYMAECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLST  149 (377)
T ss_pred             EEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeeccccc
Confidence            99999999999988654 58889999999999999999999999999999999999999999999999986


No 23 
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found 
Probab=99.97  E-value=4.2e-30  Score=267.60  Aligned_cols=173  Identities=26%  Similarity=0.436  Sum_probs=150.5

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ..++|++.+.||+|+||.||++.+ .++..||+|++......  .......+.+|+.+++.++||||+++++++.+++.+
T Consensus        41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~  118 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMI--KRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYL  118 (370)
T ss_pred             CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEE
Confidence            346899999999999999999998 57889999988642211  122234577899999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          406 YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |+||||+++|+|.+++....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~~~~~~~~~~~~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~  198 (370)
T cd05621         119 YMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMV  198 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCce
Confidence            999999999999999988889999999999999999999999999999999999999999999999999998654322  


Q ss_pred             -cccccCCCcccccccccC
Q 010676          484 -VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g  501 (504)
                       ....+||+.|||||++.+
T Consensus       199 ~~~~~~gt~~Y~aPE~~~~  217 (370)
T cd05621         199 RCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             ecccCCCCcccCCHHHHhc
Confidence             234569999999999864


No 24 
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=99.97  E-value=4.2e-30  Score=264.34  Aligned_cols=149  Identities=28%  Similarity=0.534  Sum_probs=132.6

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++++.||+|+||.||+|.+ .++..||||++.....  ........+.+|+.++..++|+||+++++++.+.+.+|+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~l   78 (364)
T cd05599           1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEM--LEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYL   78 (364)
T ss_pred             CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEE
Confidence            3689999999999999999998 5789999999864321  112334567889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ||||+.+|+|.+++... .+++..+..|+.||+.||.|||++||+||||||+||||+.+|.++|+|||++...
T Consensus        79 v~E~~~~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~  151 (364)
T cd05599          79 IMEYLPGGDMMTLLMKKDTFTEEETRFYIAETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGL  151 (364)
T ss_pred             EECCCCCcHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceec
Confidence            99999999999988654 5899999999999999999999999999999999999999999999999998653


No 25 
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=99.97  E-value=7.6e-30  Score=265.46  Aligned_cols=147  Identities=28%  Similarity=0.518  Sum_probs=131.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|++++.||+|+||+||+|.+ .++..||+|++.....  ........+.+|+.+++.++|+||+++++++.+.+.+|+|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv   79 (381)
T cd05626           2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDV--LNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV   79 (381)
T ss_pred             CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEE
Confidence            588999999999999999988 6789999998864322  1233456788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          409 LELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      |||+++|+|.+++.+. .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~  150 (381)
T cd05626          80 MDYIPGGDMMSLLIRMEVFPEVLARFYIAELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTG  150 (381)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcc
Confidence            9999999999988654 588899999999999999999999999999999999999999999999999753


No 26 
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=99.97  E-value=6.6e-30  Score=260.61  Aligned_cols=173  Identities=29%  Similarity=0.526  Sum_probs=150.4

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ..++|++.+.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.+++.++||||+++++++...+.+
T Consensus        16 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~   93 (329)
T PTZ00263         16 KLSDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREI--LKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRV   93 (329)
T ss_pred             CchheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEE
Confidence            357899999999999999999998 5789999998864321  1223346788999999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          406 YIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      |+||||+.+++|.+++... .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...... 
T Consensus        94 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~-  172 (329)
T PTZ00263         94 YFLLEFVVGGELFTHLRKAGRFPNDVAKFYHAELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT-  172 (329)
T ss_pred             EEEEcCCCCChHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc-
Confidence            9999999999999888654 58889999999999999999999999999999999999999999999999998654332 


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ...+||+.|||||++.++
T Consensus       173 ~~~~gt~~y~aPE~~~~~  190 (329)
T PTZ00263        173 FTLCGTPEYLAPEVIQSK  190 (329)
T ss_pred             ceecCChhhcCHHHHcCC
Confidence            345799999999998765


No 27 
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=99.97  E-value=9.5e-30  Score=264.29  Aligned_cols=146  Identities=27%  Similarity=0.506  Sum_probs=130.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|.+++.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.++++++|+||+++++.+.+.+.+|+|
T Consensus         2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv   79 (382)
T cd05625           2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDV--LLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV   79 (382)
T ss_pred             CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHh--hhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEE
Confidence            588999999999999999998 5788999998864221  1233456788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          409 LELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      |||+++|+|.+++.+. .+++..+..++.||+.||.|||++||+||||||+||||+.+|.+||+|||++.
T Consensus        80 ~E~~~gg~L~~~l~~~~~~~e~~~~~~~~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~  149 (382)
T cd05625          80 MDYIPGGDMMSLLIRMGIFPEDLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (382)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCc
Confidence            9999999999988664 48889999999999999999999999999999999999999999999999975


No 28 
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97  E-value=2e-30  Score=278.81  Aligned_cols=176  Identities=30%  Similarity=0.518  Sum_probs=156.3

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ..++-|++++.||.|+.|.|-+|++ .+|+..|||++.......  ......+++||.||+.+.|||++++|+.|++..+
T Consensus         9 ~tiGpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s--~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~   86 (786)
T KOG0588|consen    9 NTIGPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELS--SSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQH   86 (786)
T ss_pred             ccccceeccccccCCCCceehhhhcccccceeEEEeeccccccc--cccccchhhhhHHHHHhcCCCeeeeeeeeccCce
Confidence            3466799999999999999999998 799999999997653222  2234568899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-
Q 010676          405 LYIFLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~-~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-  482 (504)
                      +|+|+||++||.|++++- ++.+.+.++.++|+||+.|+.|+|..+|+||||||+|+||+.++++||+|||+|..-..+ 
T Consensus        87 lylvlEyv~gGELFdylv~kG~l~e~eaa~ff~QIi~gv~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gk  166 (786)
T KOG0588|consen   87 LYLVLEYVPGGELFDYLVRKGPLPEREAAHFFRQILDGVSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGK  166 (786)
T ss_pred             EEEEEEecCCchhHHHHHhhCCCCCHHHHHHHHHHHHHHHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCc
Confidence            999999999999998774 566999999999999999999999999999999999999999999999999999765444 


Q ss_pred             CcccccCCCcccccccccCCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~~  503 (504)
                      ...+.||+|.|.|||++.|.-
T Consensus       167 lLeTSCGSPHYA~PEIV~G~p  187 (786)
T KOG0588|consen  167 LLETSCGSPHYAAPEIVSGRP  187 (786)
T ss_pred             cccccCCCcccCCchhhcCCC
Confidence            467889999999999999864


No 29 
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=99.97  E-value=1e-29  Score=263.20  Aligned_cols=146  Identities=27%  Similarity=0.498  Sum_probs=130.2

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++++.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.+|..++|+||+++++.+.+++.+|+|
T Consensus         2 ~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv   79 (376)
T cd05598           2 MFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADV--LMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV   79 (376)
T ss_pred             CceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHH--HhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEE
Confidence            689999999999999999998 5789999998854221  1123346678999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          409 LELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      |||+++|+|.+++... .+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+|.
T Consensus        80 ~E~~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~  149 (376)
T cd05598          80 MDYIPGGDMMSLLIRLGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  149 (376)
T ss_pred             EeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCc
Confidence            9999999999988765 47888899999999999999999999999999999999999999999999975


No 30 
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=1.3e-30  Score=276.77  Aligned_cols=170  Identities=32%  Similarity=0.562  Sum_probs=153.6

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ..+|.....||+|..|.||.|.. .++..||||.+.+..+...     +-+.+|+.+|+.++|+|||++++.|...+.+|
T Consensus       272 ~~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~k-----eLilnEi~Vm~~~~H~NiVnfl~Sylv~deLW  346 (550)
T KOG0578|consen  272 RSKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKK-----ELLLNEILVMRDLHHPNIVNFLDSYLVGDELW  346 (550)
T ss_pred             hhhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCch-----hhhHHHHHHHHhccchHHHHHHHHhcccceeE
Confidence            44688888999999999999987 6889999999987655432     34779999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          407 IFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      +||||++||+|.+++....+++.++..++++++.||+|||.+||||||||.+|||++.+|.+||+|||||..+....  .
T Consensus       347 VVMEym~ggsLTDvVt~~~~~E~qIA~Icre~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR  426 (550)
T KOG0578|consen  347 VVMEYMEGGSLTDVVTKTRMTEGQIAAICREILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKR  426 (550)
T ss_pred             EEEeecCCCchhhhhhcccccHHHHHHHHHHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCcc
Confidence            99999999999999999999999999999999999999999999999999999999999999999999998765443  4


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      .+.+|||+|||||++..+
T Consensus       427 ~TmVGTPYWMAPEVvtrk  444 (550)
T KOG0578|consen  427 STMVGTPYWMAPEVVTRK  444 (550)
T ss_pred             ccccCCCCccchhhhhhc
Confidence            567899999999998763


No 31 
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis. 
Probab=99.97  E-value=1.3e-29  Score=257.99  Aligned_cols=171  Identities=27%  Similarity=0.422  Sum_probs=149.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++++.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.++..++||||+++++++...+.+||
T Consensus         1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~l   78 (333)
T cd05600           1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLL--FKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYL   78 (333)
T ss_pred             CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEE
Confidence            3689999999999999999998 4689999999864321  112334668899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS  486 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s  486 (504)
                      ||||+++++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++..... ....
T Consensus        79 v~e~~~g~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-~~~~  157 (333)
T cd05600          79 AMEYVPGGDFRTLLNNLGVLSEDHARFYMAEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-YANS  157 (333)
T ss_pred             EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCccccc-ccCC
Confidence            99999999999998754 588999999999999999999999999999999999999999999999999876543 3345


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..||+.|+|||++.+.
T Consensus       158 ~~gt~~y~aPE~~~~~  173 (333)
T cd05600         158 VVGSPDYMAPEVLRGK  173 (333)
T ss_pred             cccCccccChhHhcCC
Confidence            5699999999998764


No 32 
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=99.97  E-value=6.9e-30  Score=255.29  Aligned_cols=171  Identities=28%  Similarity=0.470  Sum_probs=148.2

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.+++.++||||+++++++.+.+.+|+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~l   78 (291)
T cd05612           1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEV--IRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYM   78 (291)
T ss_pred             CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEE
Confidence            3689999999999999999998 4789999998864321  112234568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS  486 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s  486 (504)
                      ||||+.+++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++..... ...
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~-~~~  157 (291)
T cd05612          79 LMEYVPGGELFSYLRNSGRFSNSTGLFYASEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDR-TWT  157 (291)
T ss_pred             EEeCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCC-ccc
Confidence            99999999999988654 5889999999999999999999999999999999999999999999999998765433 234


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      .+||+.|+|||++.+.
T Consensus       158 ~~gt~~y~aPE~~~~~  173 (291)
T cd05612         158 LCGTPEYLAPEVIQSK  173 (291)
T ss_pred             ccCChhhcCHHHHcCC
Confidence            5699999999998764


No 33 
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97  E-value=4.3e-30  Score=268.28  Aligned_cols=175  Identities=32%  Similarity=0.483  Sum_probs=149.9

Q ss_pred             cccccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          323 RFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       323 ~~~~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      .+...++.|...++||+|+||.||+|...+|..||||.+.......     ..+|.+|+.+|.+++|||+|+|+|||.+.
T Consensus        69 el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~-----~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e~  143 (361)
T KOG1187|consen   69 ELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQG-----EREFLNEVEILSRLRHPNLVKLLGYCLEG  143 (361)
T ss_pred             HHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcc-----hhHHHHHHHHHhcCCCcCcccEEEEEecC
Confidence            3455667899999999999999999999999999999665322211     34599999999999999999999999999


Q ss_pred             C-eEEEEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCC---ceecCCCCCcEEEcCCCcEEEEecCc
Q 010676          403 S-KLYIFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQD---VVHRDIKCANILVDANGSVKLADFGL  475 (504)
Q Consensus       403 ~-~lyLVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~g---IIHRDLKP~NILLd~~g~VKL~DFGL  475 (504)
                      + ..+||+||+++|+|.+++...   .++|.+..+|+.+++.||+|||...   |||||||++|||+|.+...||+|||+
T Consensus       144 ~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGL  223 (361)
T KOG1187|consen  144 GEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGL  223 (361)
T ss_pred             CceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccC
Confidence            8 599999999999999988654   6799999999999999999999853   99999999999999999999999999


Q ss_pred             cccccc-CCccc-c-cCCCcccccccccCC
Q 010676          476 AKATKL-NDVKS-C-RGTAFWMAPEVCSNP  502 (504)
Q Consensus       476 A~~~~~-~~~~s-~-~GT~~YmAPEVL~g~  502 (504)
                      |+.... ..... . .||.+|+|||++..+
T Consensus       224 a~~~~~~~~~~~~~~~gt~gY~~PEy~~~g  253 (361)
T KOG1187|consen  224 AKLGPEGDTSVSTTVMGTFGYLAPEYASTG  253 (361)
T ss_pred             cccCCccccceeeecCCCCccCChhhhccC
Confidence            976554 33222 2 799999999998754


No 34 
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=99.97  E-value=2.3e-30  Score=262.76  Aligned_cols=171  Identities=33%  Similarity=0.545  Sum_probs=147.7

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCc-eeEEeeeecCCC--
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQYYGTDKDES--  403 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn-IV~l~~~~~~~~--  403 (504)
                      ...|+.++.||+|+||+||+|+. .+|+.||+|++.+.....-   ......+|+.+|+.++|+| ||++++++.+.+  
T Consensus        10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG---~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~   86 (323)
T KOG0594|consen   10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEG---VPSTAIREISLLKRLSHANHIVRLHDVIHTSNNH   86 (323)
T ss_pred             HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccC---CCchhhHHHHHHHHhCCCcceEEEEeeeeecccc
Confidence            45678888899999999999998 6889999999986543210   1234569999999999999 999999998877  


Q ss_pred             ----eEEEEEEeccCCCHHHHHHhc-----CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecC
Q 010676          404 ----KLYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG  474 (504)
Q Consensus       404 ----~lyLVmEy~~ggsL~~ll~~~-----~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFG  474 (504)
                          .+|+||||+.. +|..++...     +++...++.+++||+.||.|||+++|+||||||+||||+.+|.+||+|||
T Consensus        87 ~~~~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFG  165 (323)
T KOG0594|consen   87 RGIGKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFG  165 (323)
T ss_pred             cccceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccc
Confidence                89999999976 899988763     47778899999999999999999999999999999999999999999999


Q ss_pred             cccccc--cCCcccccCCCcccccccccCC
Q 010676          475 LAKATK--LNDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       475 LA~~~~--~~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      +|+...  .......++|.+|.|||+|.|.
T Consensus       166 lAra~~ip~~~yt~evvTlWYRaPEvLlGs  195 (323)
T KOG0594|consen  166 LARAFSIPMRTYTPEVVTLWYRAPEVLLGS  195 (323)
T ss_pred             hHHHhcCCcccccccEEEeeccCHHHhcCC
Confidence            998654  3346677899999999999875


No 35 
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=99.97  E-value=1.7e-29  Score=260.48  Aligned_cols=172  Identities=29%  Similarity=0.503  Sum_probs=147.3

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||++.. .++..||+|++.....  ........+.+|+.++..++|+||+++++.+.+.+.+|+
T Consensus         1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~l   78 (360)
T cd05627           1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADM--LEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYL   78 (360)
T ss_pred             CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            3689999999999999999998 5789999998864321  123345678889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      ||||+++|+|.+++.+ ..+++..+..|+.||+.||.|||++||+||||||+||||+.+|.+||+|||++.......   
T Consensus        79 v~E~~~gg~L~~~l~~~~~l~~~~~~~~~~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~  158 (360)
T cd05627          79 IMEFLPGGDMMTLLMKKDTLSEEATQFYIAETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTE  158 (360)
T ss_pred             EEeCCCCccHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccc
Confidence            9999999999998865 458999999999999999999999999999999999999999999999999986432110   


Q ss_pred             ----------------------------------cccccCCCcccccccccCC
Q 010676          484 ----------------------------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ----------------------------------~~s~~GT~~YmAPEVL~g~  502 (504)
                                                        ....+||+.|||||++.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~  211 (360)
T cd05627         159 FYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQT  211 (360)
T ss_pred             cccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCC
Confidence                                              1134699999999998764


No 36 
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=99.96  E-value=1.6e-29  Score=256.92  Aligned_cols=166  Identities=29%  Similarity=0.445  Sum_probs=142.6

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEecc
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT  413 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~  413 (504)
                      +.||+|+||.||+|.+ .+|..||+|++.....  ........+.+|+.+++.++||||+++++++...+.+|+||||+.
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~   78 (323)
T cd05571           1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVI--IAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCC
Confidence            4699999999999988 5889999998864221  122334567789999999999999999999999999999999999


Q ss_pred             CCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccCC
Q 010676          414 KGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRGT  490 (504)
Q Consensus       414 ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~GT  490 (504)
                      +++|..++.. ..+++..+..++.||+.||+|||++||+||||||+||||+.++.+||+|||+++....  ......+||
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt  158 (323)
T cd05571          79 GGELFFHLSRERVFSEDRARFYGAEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence            9999988765 4589999999999999999999999999999999999999999999999999875322  223445799


Q ss_pred             CcccccccccCC
Q 010676          491 AFWMAPEVCSNP  502 (504)
Q Consensus       491 ~~YmAPEVL~g~  502 (504)
                      +.|||||++.+.
T Consensus       159 ~~y~aPE~~~~~  170 (323)
T cd05571         159 PEYLAPEVLEDN  170 (323)
T ss_pred             ccccChhhhcCC
Confidence            999999998764


No 37 
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.96  E-value=2.7e-30  Score=269.48  Aligned_cols=177  Identities=31%  Similarity=0.553  Sum_probs=148.0

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccch---------hhHHHHHHHHHHHHHHhhCCCCceeE
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGS---------QAKQSISQLEQEIALLSRFEHENIVQ  394 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~---------~~~~~~~~~~~Ei~iL~~L~HpnIV~  394 (504)
                      +..++.|++++.||+|.||.|-+|.+ .+++.||||++.......         ....-++++.+||.+|+++.|||||+
T Consensus        93 ~k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~  172 (576)
T KOG0585|consen   93 RKQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVK  172 (576)
T ss_pred             ceehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeE
Confidence            35678999999999999999999998 689999999986533221         11112357889999999999999999


Q ss_pred             EeeeecC--CCeEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEE
Q 010676          395 YYGTDKD--ESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLA  471 (504)
Q Consensus       395 l~~~~~~--~~~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~  471 (504)
                      |+.+..+  .+.+|||+|||..|.+...-.... +.+.+++.|++.++.||+|||.+|||||||||+|+||+.+|+|||+
T Consensus       173 LiEvLDDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~ylrDvv~GLEYLH~QgiiHRDIKPsNLLl~~~g~VKIs  252 (576)
T KOG0585|consen  173 LIEVLDDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYLRDVVLGLEYLHYQGIIHRDIKPSNLLLSSDGTVKIS  252 (576)
T ss_pred             EEEeecCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEEcCCCcEEee
Confidence            9998765  467999999999988765444444 8899999999999999999999999999999999999999999999


Q ss_pred             ecCcccccccCC-------cccccCCCcccccccccC
Q 010676          472 DFGLAKATKLND-------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       472 DFGLA~~~~~~~-------~~s~~GT~~YmAPEVL~g  501 (504)
                      |||.+.......       ....+|||.|||||++.+
T Consensus       253 DFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~  289 (576)
T KOG0585|consen  253 DFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSG  289 (576)
T ss_pred             ccceeeecccCCccccHHHHhhcCCCccccchHhhcC
Confidence            999987552221       234679999999999887


No 38 
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.96  E-value=8.3e-31  Score=254.41  Aligned_cols=174  Identities=31%  Similarity=0.511  Sum_probs=157.1

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      .+++|++++.||+|-||.||+|+. .++..+|+|++.+..  ....+...++.+|+++...|+||||+++|++|.+...+
T Consensus        20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsq--i~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~ri   97 (281)
T KOG0580|consen   20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQ--ILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRI   97 (281)
T ss_pred             chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHH--HHHhcchhhhhheeEeecccCCccHHhhhhheecccee
Confidence            467899999999999999999997 688999999886533  33344456788999999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          406 YIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      |+++||...|.|...++.   ..+++.....|+.|++.||.|+|.+++|||||||+|+|++.+|.+||+|||++.....+
T Consensus        98 yLilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~  177 (281)
T KOG0580|consen   98 YLILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSN  177 (281)
T ss_pred             EEEEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCC
Confidence            999999999999998873   34899999999999999999999999999999999999999999999999999877777


Q ss_pred             CcccccCCCcccccccccCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....|||..|.+||+..+.
T Consensus       178 kR~tlcgt~dyl~pEmv~~~  197 (281)
T KOG0580|consen  178 KRKTLCGTLDYLPPEMVEGR  197 (281)
T ss_pred             CceeeecccccCCHhhcCCC
Confidence            77888999999999999875


No 39 
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=99.96  E-value=2e-29  Score=262.09  Aligned_cols=173  Identities=28%  Similarity=0.440  Sum_probs=150.0

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ..++|++.+.||+|+||.||++.+ .++..||+|++......  .......+.+|+.+++.++||||+++++++.+.+.+
T Consensus        41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~  118 (370)
T cd05596          41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMI--KRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYL  118 (370)
T ss_pred             CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEE
Confidence            356899999999999999999998 57889999988642211  122234577899999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          406 YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |+||||+++|+|.+++....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++.......  
T Consensus       119 ~lv~Ey~~gg~L~~~l~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~  198 (370)
T cd05596         119 YMVMEYMPGGDLVNLMSNYDIPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMV  198 (370)
T ss_pred             EEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcc
Confidence            999999999999999988889999999999999999999999999999999999999999999999999987654322  


Q ss_pred             -cccccCCCcccccccccC
Q 010676          484 -VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g  501 (504)
                       ....+||+.|||||++.+
T Consensus       199 ~~~~~~gt~~y~aPE~~~~  217 (370)
T cd05596         199 RCDTAVGTPDYISPEVLKS  217 (370)
T ss_pred             cCCCCCCCcCeECHHHhcc
Confidence             234569999999999864


No 40 
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=99.96  E-value=2.7e-29  Score=258.54  Aligned_cols=175  Identities=31%  Similarity=0.440  Sum_probs=149.7

Q ss_pred             cccccceeeeeeecccCceeEEEEEcc--CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~~--~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      ....++|++.+.||+|+||.||+|.+.  ++..||+|.+.....  ........+.+|+.++..++||||+++++++.+.
T Consensus        26 ~~~~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~  103 (340)
T PTZ00426         26 KMKYEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKI--IKQKQVDHVFSERKILNYINHPFCVNLYGSFKDE  103 (340)
T ss_pred             CCChhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHh--hhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeC
Confidence            345678999999999999999999863  346899998864321  1223345678999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      +.+|+||||+.+|+|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus       104 ~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~  183 (340)
T PTZ00426        104 SYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYAAQIVLIFEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT  183 (340)
T ss_pred             CEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence            9999999999999999988654 588999999999999999999999999999999999999999999999999976543


Q ss_pred             CCcccccCCCcccccccccCC
Q 010676          482 NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      . ....+||+.|||||++.+.
T Consensus       184 ~-~~~~~gt~~y~aPE~~~~~  203 (340)
T PTZ00426        184 R-TYTLCGTPEYIAPEILLNV  203 (340)
T ss_pred             C-cceecCChhhcCHHHHhCC
Confidence            2 3345799999999998754


No 41 
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=99.96  E-value=2.8e-29  Score=261.32  Aligned_cols=174  Identities=26%  Similarity=0.430  Sum_probs=150.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ...++|++.+.||+|+||.||++.+ .++..||+|++.....  ........+.+|+.+++.++||||+++++++.+...
T Consensus        40 ~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~  117 (371)
T cd05622          40 MKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEM--IKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRY  117 (371)
T ss_pred             cchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence            3457899999999999999999998 5788999998864221  112223457789999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          405 LYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      +|+||||+++|+|.+++....+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++....... 
T Consensus       118 ~~lv~Ey~~gg~L~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~  197 (371)
T cd05622         118 LYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGM  197 (371)
T ss_pred             EEEEEcCCCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCc
Confidence            9999999999999999988889999999999999999999999999999999999999999999999999997654322 


Q ss_pred             --cccccCCCcccccccccC
Q 010676          484 --VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g  501 (504)
                        ....+||+.|||||++.+
T Consensus       198 ~~~~~~~gt~~y~aPE~l~~  217 (371)
T cd05622         198 VRCDTAVGTPDYISPEVLKS  217 (371)
T ss_pred             ccccCcccCccccCHHHHhc
Confidence              234569999999999864


No 42 
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the 
Probab=99.96  E-value=2e-29  Score=256.99  Aligned_cols=172  Identities=33%  Similarity=0.537  Sum_probs=149.1

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|.+.+.||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.++..++|+||+++++++.+.+.+|+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   78 (350)
T cd05573           1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDM--IKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYL   78 (350)
T ss_pred             CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEE
Confidence            3689999999999999999998 4799999999864321  112334568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      ||||+.+++|.+++... .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++.......   
T Consensus        79 v~e~~~~~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~  158 (350)
T cd05573          79 VMEYMPGGDLMNLLIRKDVFPEETARFYIAELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDRE  158 (350)
T ss_pred             EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccc
Confidence            99999999999988765 68999999999999999999999999999999999999999999999999987644322   


Q ss_pred             ----------------------------cccccCCCcccccccccCC
Q 010676          484 ----------------------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ----------------------------~~s~~GT~~YmAPEVL~g~  502 (504)
                                                  .....||+.|+|||++.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  205 (350)
T cd05573         159 YYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGT  205 (350)
T ss_pred             ccccccccccccccccccccccccccccccccccCccccCHHHHcCC
Confidence                                        2334699999999998765


No 43 
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=99.96  E-value=7.4e-29  Score=246.81  Aligned_cols=171  Identities=25%  Similarity=0.372  Sum_probs=145.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|++.+.||+|+||.||+|.+ .++..||+|.+......  .......+.+|+.++..++|+||+++++++.+.+.+|+|
T Consensus         1 ~f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05631           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK--KRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhh--hhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEE
Confidence            378889999999999999998 68999999988643221  122234577899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-Cc
Q 010676          409 LELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DV  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-~~  484 (504)
                      |||+.+|+|..++..   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++...... ..
T Consensus        79 ~e~~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  158 (285)
T cd05631          79 LTIMNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETV  158 (285)
T ss_pred             EEecCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCee
Confidence            999999999877643   24888999999999999999999999999999999999999999999999998765432 23


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....||+.|||||++.+.
T Consensus       159 ~~~~g~~~y~aPE~~~~~  176 (285)
T cd05631         159 RGRVGTVGYMAPEVINNE  176 (285)
T ss_pred             cCCCCCCCccCHhhhcCC
Confidence            445699999999998764


No 44 
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4.9e-29  Score=258.68  Aligned_cols=176  Identities=30%  Similarity=0.521  Sum_probs=153.2

Q ss_pred             ccccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeec
Q 010676          322 GRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDK  400 (504)
Q Consensus       322 ~~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~  400 (504)
                      ..+....+.|++...||.|..++||+|+. ..+..||||++.+.+..    ..+..+.+|+..+..++||||++++..|.
T Consensus        19 ~~~p~n~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~----~~ld~l~kE~~~msl~~HPNIv~~~~sFv   94 (516)
T KOG0582|consen   19 KEFPLNAKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCN----NDLDALRKEVQTMSLIDHPNIVTYHCSFV   94 (516)
T ss_pred             ccCCCCccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhh----hhHHHHHHHHHHhhhcCCCCcceEEEEEE
Confidence            34455567899999999999999999998 67899999999764432    23677899999999999999999999999


Q ss_pred             CCCeEEEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          401 DESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       401 ~~~~lyLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      .+..+|+||.||.+|++.++++.   .++.+..+..|+++++.||.|||.+|.||||||+.||||+.+|.|||+|||...
T Consensus        95 v~~~LWvVmpfMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa  174 (516)
T KOG0582|consen   95 VDSELWVVMPFMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSA  174 (516)
T ss_pred             ecceeEEeehhhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeee
Confidence            99999999999999999999875   469999999999999999999999999999999999999999999999999865


Q ss_pred             ccccCC------cccccCCCcccccccccC
Q 010676          478 ATKLND------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       478 ~~~~~~------~~s~~GT~~YmAPEVL~g  501 (504)
                      .+....      ....+||++||||||+..
T Consensus       175 ~l~~~G~R~~~rf~tfvgtp~wmAPEvl~q  204 (516)
T KOG0582|consen  175 SLFDSGDRQVTRFNTFVGTPCWMAPEVLMQ  204 (516)
T ss_pred             eecccCceeeEeeccccCcccccChHHhhh
Confidence            432221      145679999999999653


No 45 
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.96  E-value=5.8e-29  Score=252.81  Aligned_cols=172  Identities=29%  Similarity=0.444  Sum_probs=145.6

Q ss_pred             ceeeeeeecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCe
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESK  404 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~  404 (504)
                      +|++++.||+|+||.||++..    .++..||+|++...... ........+.+|+.++..++ |+||+++++++...+.
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~-~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (332)
T cd05614           1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALV-QKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAK   79 (332)
T ss_pred             CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHh-hhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCE
Confidence            488999999999999999886    36889999988642211 12233456778999999995 9999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          405 LYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +|+||||+.+|+|.+++.. ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......
T Consensus        80 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~  159 (332)
T cd05614          80 LHLILDYVSGGEMFTHLYQRDNFSEDEVRFYSGEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEE  159 (332)
T ss_pred             EEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccC
Confidence            9999999999999988754 458999999999999999999999999999999999999999999999999987543222


Q ss_pred             ---cccccCCCcccccccccCC
Q 010676          484 ---VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ---~~s~~GT~~YmAPEVL~g~  502 (504)
                         ....+||+.|||||++.+.
T Consensus       160 ~~~~~~~~gt~~y~aPE~~~~~  181 (332)
T cd05614         160 KERTYSFCGTIEYMAPEIIRGK  181 (332)
T ss_pred             CCccccccCCccccCHHHhcCC
Confidence               2345699999999998753


No 46 
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96  E-value=4.8e-30  Score=257.69  Aligned_cols=177  Identities=27%  Similarity=0.422  Sum_probs=156.2

Q ss_pred             cccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          323 RFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       323 ~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      +-+..+++|..+++||+|+||.|-+++. .+++.||+|++++.  ....+..+.+...|-++|+..+||++..+...|++
T Consensus       162 ~~kvTm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKe--viiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt  239 (516)
T KOG0690|consen  162 KNKVTMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKE--VIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQT  239 (516)
T ss_pred             cceeccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhh--heeehHHhhhhhhHHHHHHhccCcHHHHhhhhhcc
Confidence            3445678999999999999999999987 68999999988642  23345556777889999999999999999999999


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc-c
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-T  479 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~-~  479 (504)
                      ++.+|+||||..||.|..++.+. .+++.....|-.+|+.||.|||+++||+||||.+|+|+|.+|++||+|||||+. +
T Consensus       240 ~drlCFVMeyanGGeLf~HLsrer~FsE~RtRFYGaEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I  319 (516)
T KOG0690|consen  240 QDRLCFVMEYANGGELFFHLSRERVFSEDRTRFYGAEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEI  319 (516)
T ss_pred             CceEEEEEEEccCceEeeehhhhhcccchhhhhhhHHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcc
Confidence            99999999999999998877654 599999999999999999999999999999999999999999999999999986 3


Q ss_pred             c-cCCcccccCCCcccccccccC
Q 010676          480 K-LNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       480 ~-~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      . ......+||||.|+|||||..
T Consensus       320 ~~g~t~kTFCGTPEYLAPEVleD  342 (516)
T KOG0690|consen  320 KYGDTTKTFCGTPEYLAPEVLED  342 (516)
T ss_pred             cccceeccccCChhhcCchhhcc
Confidence            3 334678899999999999974


No 47 
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=99.96  E-value=5.5e-29  Score=253.23  Aligned_cols=166  Identities=30%  Similarity=0.462  Sum_probs=142.3

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEecc
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT  413 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~  413 (504)
                      +.||+|+||.||++.+ .+|..||+|++.....  ........+.+|+.+++.++||||++++++|...+.+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (323)
T cd05595           1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVI--IAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYAN   78 (323)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCC
Confidence            4699999999999998 5789999998864221  122344567789999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--CcccccCC
Q 010676          414 KGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSCRGT  490 (504)
Q Consensus       414 ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~~GT  490 (504)
                      +++|..++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  ......||
T Consensus        79 ~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  158 (323)
T cd05595          79 GGELFFHLSRERVFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence            99999887654 5899999999999999999999999999999999999999999999999998753222  23345699


Q ss_pred             CcccccccccCC
Q 010676          491 AFWMAPEVCSNP  502 (504)
Q Consensus       491 ~~YmAPEVL~g~  502 (504)
                      +.|||||++.++
T Consensus       159 ~~y~aPE~~~~~  170 (323)
T cd05595         159 PEYLAPEVLEDN  170 (323)
T ss_pred             cCcCCcccccCC
Confidence            999999998764


No 48 
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=99.96  E-value=7.7e-29  Score=252.97  Aligned_cols=171  Identities=25%  Similarity=0.406  Sum_probs=146.9

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||++.+ .++..||+|++.....  ........+.+|+.++..++|+||+++++++.+.+.+|+
T Consensus         1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~l   78 (331)
T cd05624           1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEM--LKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYL   78 (331)
T ss_pred             CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence            4689999999999999999998 5788999998864221  122334557789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc-
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~-  484 (504)
                      ||||+.+|+|.+++..  ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus        79 v~Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  158 (331)
T cd05624          79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTV  158 (331)
T ss_pred             EEeCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCce
Confidence            9999999999999875  4588999999999999999999999999999999999999999999999999876543322 


Q ss_pred             --ccccCCCcccccccccC
Q 010676          485 --KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 --~s~~GT~~YmAPEVL~g  501 (504)
                        ...+||+.|||||++.+
T Consensus       159 ~~~~~~gt~~y~aPE~~~~  177 (331)
T cd05624         159 QSSVAVGTPDYISPEILQA  177 (331)
T ss_pred             eeccccCCcccCCHHHHhc
Confidence              23469999999999864


No 49 
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved 
Probab=99.96  E-value=4.8e-29  Score=253.20  Aligned_cols=170  Identities=29%  Similarity=0.474  Sum_probs=143.9

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHH---hhCCCCceeEEeeeecCCCeEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALL---SRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL---~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      |++.+.||+|+||.||+|.+ .++..||||++.....  ........+.+|+.++   ..++||||+++++++...+.+|
T Consensus         1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~   78 (324)
T cd05589           1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDI--IARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVC   78 (324)
T ss_pred             CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEE
Confidence            67899999999999999987 5789999999864321  1122334566666554   5677999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCc
Q 010676          407 IFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDV  484 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~  484 (504)
                      +||||+.+++|..++....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....  ...
T Consensus        79 lv~E~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05589          79 FVMEYAAGGDLMMHIHTDVFSEPRAVFYAACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRT  158 (324)
T ss_pred             EEEcCCCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcc
Confidence            999999999999998888899999999999999999999999999999999999999999999999999875322  223


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ...+||+.|||||++.+.
T Consensus       159 ~~~~g~~~y~aPE~~~~~  176 (324)
T cd05589         159 STFCGTPEFLAPEVLTET  176 (324)
T ss_pred             cccccCccccCHhHhcCC
Confidence            446799999999998764


No 50 
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=99.96  E-value=5.8e-29  Score=253.89  Aligned_cols=170  Identities=26%  Similarity=0.426  Sum_probs=146.4

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++++.||+|+||.||++.. .++..||+|++.....  ........+.+|+.++..++|+||+++++++.+.+.+|+
T Consensus         1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   78 (331)
T cd05597           1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEM--LKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYL   78 (331)
T ss_pred             CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEE
Confidence            3689999999999999999997 5789999998864221  122234567889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc-
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~-  484 (504)
                      ||||+.+++|.+++.+  ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++........ 
T Consensus        79 v~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~  158 (331)
T cd05597          79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTV  158 (331)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCc
Confidence            9999999999999875  3589999999999999999999999999999999999999999999999999876443221 


Q ss_pred             --ccccCCCccccccccc
Q 010676          485 --KSCRGTAFWMAPEVCS  500 (504)
Q Consensus       485 --~s~~GT~~YmAPEVL~  500 (504)
                        ...+||+.|||||++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~  176 (331)
T cd05597         159 QSNVAVGTPDYISPEILQ  176 (331)
T ss_pred             cccceeccccccCHHHHh
Confidence              2246999999999986


No 51 
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=99.96  E-value=6.7e-29  Score=253.38  Aligned_cols=166  Identities=28%  Similarity=0.451  Sum_probs=142.6

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEecc
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT  413 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~  413 (504)
                      +.||+|+||.||++.+ .++..||+|++.....  ........+.+|+.+++.++||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~   78 (328)
T cd05593           1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVI--IAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVN   78 (328)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCC
Confidence            4699999999999998 5789999998864221  123345677889999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccCC
Q 010676          414 KGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRGT  490 (504)
Q Consensus       414 ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~GT  490 (504)
                      +++|..++... .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++....  ......+||
T Consensus        79 ~g~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  158 (328)
T cd05593          79 GGELFFHLSRERVFSEDRTRFYGAEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT  158 (328)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence            99998887654 589999999999999999999999999999999999999999999999999875322  223445799


Q ss_pred             CcccccccccCC
Q 010676          491 AFWMAPEVCSNP  502 (504)
Q Consensus       491 ~~YmAPEVL~g~  502 (504)
                      +.|||||++.+.
T Consensus       159 ~~y~aPE~~~~~  170 (328)
T cd05593         159 PEYLAPEVLEDN  170 (328)
T ss_pred             cCccChhhhcCC
Confidence            999999998754


No 52 
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.96  E-value=7.6e-29  Score=260.48  Aligned_cols=175  Identities=35%  Similarity=0.537  Sum_probs=153.5

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCC
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDE  402 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~  402 (504)
                      ..+...|++++.||+|.||.||+++. .+|..+|+|.+.......  ......+.+|+.+|+++. |||||.++++|++.
T Consensus        31 ~~~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~--~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~  108 (382)
T KOG0032|consen   31 EDIKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRG--KEDREDVRREVAILQQLSGHPNIVQLKDAFEDP  108 (382)
T ss_pred             ccccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccc--cccHHHHHHHHHHHHhccCCCCEEEEEEEEEcC
Confidence            34566899999999999999999998 469999999987544332  224567889999999999 99999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC----CcEEEEecCcccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN----GSVKLADFGLAKA  478 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~----g~VKL~DFGLA~~  478 (504)
                      +.+|+|||++.||.|.+.+....+++..+..++.||+.++.|||+.||+||||||+|||+...    +.+|++|||++..
T Consensus       109 ~~~~lvmEL~~GGeLfd~i~~~~~sE~da~~~~~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~  188 (382)
T KOG0032|consen  109 DSVYLVMELCEGGELFDRIVKKHYSERDAAGIIRQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKF  188 (382)
T ss_pred             CeEEEEEEecCCchHHHHHHHccCCHHHHHHHHHHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceE
Confidence            999999999999999997766569999999999999999999999999999999999999633    5799999999988


Q ss_pred             cccC-CcccccCCCcccccccccC
Q 010676          479 TKLN-DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       479 ~~~~-~~~s~~GT~~YmAPEVL~g  501 (504)
                      .... .....+||+.|+|||++.+
T Consensus       189 ~~~~~~~~~~~Gtp~y~APEvl~~  212 (382)
T KOG0032|consen  189 IKPGERLHTIVGTPEYVAPEVLGG  212 (382)
T ss_pred             ccCCceEeeecCCccccCchhhcC
Confidence            7653 3567789999999999984


No 53 
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=99.96  E-value=1.1e-28  Score=250.72  Aligned_cols=166  Identities=28%  Similarity=0.448  Sum_probs=141.7

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEecc
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT  413 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~  413 (504)
                      +.||+|+||.||++.+ .++..||+|++.....  ........+.+|+.++..++||||+++++++...+.+|+||||++
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~--~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~   78 (325)
T cd05594           1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVI--VAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN   78 (325)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCC
Confidence            4699999999999997 6889999999864321  122334567789999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          414 KGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       414 ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      +++|..++... .+++..+..++.||+.||.|||+ +||+||||||+|||++.++.+||+|||+++....  .......|
T Consensus        79 ~~~L~~~l~~~~~l~~~~~~~~~~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (325)
T cd05594          79 GGELFFHLSRERVFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG  158 (325)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence            99999887654 58999999999999999999997 7999999999999999999999999999875332  22334569


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.++
T Consensus       159 t~~y~aPE~~~~~  171 (325)
T cd05594         159 TPEYLAPEVLEDN  171 (325)
T ss_pred             CcccCCHHHHccC
Confidence            9999999998764


No 54 
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=99.96  E-value=9.3e-29  Score=249.82  Aligned_cols=164  Identities=29%  Similarity=0.455  Sum_probs=141.0

Q ss_pred             ecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.++..++||||+++++++...+.+|+||||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g   78 (312)
T cd05585           1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHI--VSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGG   78 (312)
T ss_pred             CCcCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCC
Confidence            79999999999998 5788999998864221  12334566788999999999999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--CcccccCCCc
Q 010676          416 SLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSCRGTAF  492 (504)
Q Consensus       416 sL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~~GT~~  492 (504)
                      +|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  .....+||+.
T Consensus        79 ~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~  158 (312)
T cd05585          79 ELFHHLQREGRFDLSRARFYTAELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCGTPE  158 (312)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccCCcc
Confidence            999888654 5899999999999999999999999999999999999999999999999998753222  2334569999


Q ss_pred             ccccccccCC
Q 010676          493 WMAPEVCSNP  502 (504)
Q Consensus       493 YmAPEVL~g~  502 (504)
                      |||||++.+.
T Consensus       159 y~aPE~~~~~  168 (312)
T cd05585         159 YLAPELLLGH  168 (312)
T ss_pred             cCCHHHHcCC
Confidence            9999998764


No 55 
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=99.96  E-value=9.5e-29  Score=251.02  Aligned_cols=170  Identities=33%  Similarity=0.474  Sum_probs=147.7

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|.+.+.||+|+||.||++.+ .++..||+|++.....  ........+.+|+.+++.++|+||+++++++...+.+|+
T Consensus         1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~l   78 (330)
T cd05601           1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVL--LAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYL   78 (330)
T ss_pred             CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEE
Confidence            3689999999999999999998 5789999998874322  122344668889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      ||||+++++|.+++...  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus        79 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~  158 (330)
T cd05601          79 VMEYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMV  158 (330)
T ss_pred             EECCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCce
Confidence            99999999999998764  58999999999999999999999999999999999999999999999999997654332  


Q ss_pred             -cccccCCCccccccccc
Q 010676          484 -VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~  500 (504)
                       .....||+.|+|||++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~  176 (330)
T cd05601         159 NSKLPVGTPDYIAPEVLT  176 (330)
T ss_pred             eeecccCCccccCHHHhc
Confidence             12346999999999986


No 56 
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=99.96  E-value=1.2e-28  Score=245.57  Aligned_cols=169  Identities=29%  Similarity=0.465  Sum_probs=143.7

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      +++|++.+.||.|+||.||+|.+ .++..||+|.+.......    ....+.+|+.+++.++||||+++++++.+.+.+|
T Consensus         4 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   79 (288)
T cd07871           4 LETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEG----APCTAIREVSLLKNLKHANIVTLHDIIHTERCLT   79 (288)
T ss_pred             cccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCC----cchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEE
Confidence            45799999999999999999998 578999999886432211    1235678999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          407 IFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      +||||+.+ +|.+++...  .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  
T Consensus        80 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~  158 (288)
T cd07871          80 LVFEYLDS-DLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK  158 (288)
T ss_pred             EEEeCCCc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc
Confidence            99999986 888877654  3788899999999999999999999999999999999999999999999998764322  


Q ss_pred             CcccccCCCcccccccccC
Q 010676          483 DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g  501 (504)
                      ......+|+.|||||++.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (288)
T cd07871         159 TYSNEVVTLWYRPPDVLLG  177 (288)
T ss_pred             cccCceecccccChHHhcC
Confidence            2234568999999998865


No 57 
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.96  E-value=1.5e-29  Score=265.86  Aligned_cols=172  Identities=33%  Similarity=0.578  Sum_probs=153.5

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe-E
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK-L  405 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~-l  405 (504)
                      .+.|..++++|+|+||.+++++. .++..|++|++.+........   ...++|+.++++++|||||.+++.|..++. +
T Consensus         3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r---~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l   79 (426)
T KOG0589|consen    3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPER---RSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLL   79 (426)
T ss_pred             cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhh---HHHHHHHHHHHhccCCCeeeeccchhcCCceE
Confidence            46789999999999999999987 577899999998765544332   356799999999999999999999999998 9


Q ss_pred             EEEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          406 YIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      ||||+||+||+|.+.+.+.+   |.++.+..|+.||+.||.|||+++|+|||||+.|||++.++.|+|+|||+|+.....
T Consensus        80 ~Ivm~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~  159 (426)
T KOG0589|consen   80 CIVMEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPE  159 (426)
T ss_pred             EEEEeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCc
Confidence            99999999999999886543   899999999999999999999999999999999999999999999999999987766


Q ss_pred             C--cccccCCCcccccccccCC
Q 010676          483 D--VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~--~~s~~GT~~YmAPEVL~g~  502 (504)
                      .  ..+..||+.||+||++.+.
T Consensus       160 ~~~a~tvvGTp~YmcPEil~d~  181 (426)
T KOG0589|consen  160 DSLASTVVGTPYYMCPEILSDI  181 (426)
T ss_pred             hhhhheecCCCcccCHHHhCCC
Confidence            4  4567899999999999875


No 58 
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=99.96  E-value=1.6e-28  Score=249.27  Aligned_cols=171  Identities=25%  Similarity=0.402  Sum_probs=144.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCC-CceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH-ENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pnIV~l~~~~~~~~~lyL  407 (504)
                      +|++++.||+|+||.||+|.+ .++..||+|++.....  ........+..|+.++..+.| ++|+++++++...+.+|+
T Consensus         1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (324)
T cd05587           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVI--IQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYF   78 (324)
T ss_pred             CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEE
Confidence            488999999999999999998 4678999998864221  112334567789999999876 568889999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--cCCc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--~~~~  484 (504)
                      ||||+++|+|..++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....  ....
T Consensus        79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~  158 (324)
T cd05587          79 VMEYVNGGDLMYHIQQVGKFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTT  158 (324)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCce
Confidence            99999999999888654 58999999999999999999999999999999999999999999999999987532  2223


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ...+||+.|+|||++.++
T Consensus       159 ~~~~gt~~y~aPE~~~~~  176 (324)
T cd05587         159 RTFCGTPDYIAPEIIAYQ  176 (324)
T ss_pred             eeecCCccccChhhhcCC
Confidence            445799999999998764


No 59 
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=99.96  E-value=1.3e-29  Score=257.95  Aligned_cols=164  Identities=29%  Similarity=0.459  Sum_probs=138.8

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC-----
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE-----  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-----  402 (504)
                      -.|.-.+++|.|+||.||+|+. .++..||||.+.......         .+|+.+|+.++|||||+++.+|...     
T Consensus        24 i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r~k---------nrEl~im~~l~HpNIV~L~~~f~~~~~~d~   94 (364)
T KOG0658|consen   24 ISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKRYK---------NRELQIMRKLDHPNIVRLLYFFSSSTESDE   94 (364)
T ss_pred             EEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCCcC---------cHHHHHHHhcCCcCeeeEEEEEEecCCCch
Confidence            3688899999999999999998 578999999886433322         2789999999999999998877432     


Q ss_pred             CeEEEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC-CcEEEEecCcc
Q 010676          403 SKLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLA  476 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~-g~VKL~DFGLA  476 (504)
                      -++.+||||++. +|.++++.     ..++.-.++.|++||+.||.|||+.||+||||||.|||+|.+ |.+||||||.|
T Consensus        95 ~~lnlVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA  173 (364)
T KOG0658|consen   95 VYLNLVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSA  173 (364)
T ss_pred             hHHHHHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence            256799999987 78888873     468888999999999999999999999999999999999965 99999999999


Q ss_pred             cccccCC-cccccCCCcccccccccCC
Q 010676          477 KATKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       477 ~~~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      +.+..+. ..++..|.+|+|||++.|.
T Consensus       174 K~L~~~epniSYicSRyYRaPELifga  200 (364)
T KOG0658|consen  174 KVLVKGEPNISYICSRYYRAPELIFGA  200 (364)
T ss_pred             eeeccCCCceeEEEeccccCHHHHcCc
Confidence            9865544 4556689999999999874


No 60 
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=99.96  E-value=1.4e-28  Score=250.31  Aligned_cols=171  Identities=29%  Similarity=0.438  Sum_probs=139.8

Q ss_pred             ccceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeec
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDK  400 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~  400 (504)
                      .++|++.+.||+|+||.||+|.+      .++..||+|++....    .......+.+|+.+|..+ +||||+++++++.
T Consensus         6 ~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (338)
T cd05102           6 RDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGA----TASEHKALMSELKILIHIGNHLNVVNLLGACT   81 (338)
T ss_pred             hhHceeeeEeccCCcceEEEEEEeccCCcccchhhheecccccc----chHHHHHHHHHHHHHHHhccCcceeeEEeEec
Confidence            35799999999999999999974      345789999875321    122345688999999999 8999999999877


Q ss_pred             CC-CeEEEEEEeccCCCHHHHHHhc-------------------------------------------------------
Q 010676          401 DE-SKLYIFLELVTKGSLLNLYQRY-------------------------------------------------------  424 (504)
Q Consensus       401 ~~-~~lyLVmEy~~ggsL~~ll~~~-------------------------------------------------------  424 (504)
                      .. ..+|+||||+++|+|.+++...                                                       
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (338)
T cd05102          82 KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQ  161 (338)
T ss_pred             CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccch
Confidence            64 4689999999999999988642                                                       


Q ss_pred             --------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC----cccccCCCc
Q 010676          425 --------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAF  492 (504)
Q Consensus       425 --------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~  492 (504)
                              .+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++......    .....+++.
T Consensus       162 ~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~  241 (338)
T cd05102         162 ETDDLWKSPLTMEDLICYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLK  241 (338)
T ss_pred             hccccccCCCCHHHHHHHHHHHHHHHHHHHHCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCcc
Confidence                    26677888999999999999999999999999999999999999999999997643221    122346788


Q ss_pred             ccccccccCC
Q 010676          493 WMAPEVCSNP  502 (504)
Q Consensus       493 YmAPEVL~g~  502 (504)
                      |||||++.++
T Consensus       242 y~aPE~~~~~  251 (338)
T cd05102         242 WMAPESIFDK  251 (338)
T ss_pred             ccCcHHhhcC
Confidence            9999998654


No 61 
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=99.96  E-value=1.6e-28  Score=249.49  Aligned_cols=167  Identities=32%  Similarity=0.490  Sum_probs=141.0

Q ss_pred             eeecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEE
Q 010676          335 DLLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       335 k~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      +.||+|+||.||++..    .++..||+|++....... .......+.+|+.+|+.++||||+++++++..++.+|+|||
T Consensus         2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~-~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e   80 (323)
T cd05584           2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVR-NQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILE   80 (323)
T ss_pred             ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHh-hhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEe
Confidence            6799999999999986    367899999886432211 12233567789999999999999999999999999999999


Q ss_pred             eccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Ccccc
Q 010676          411 LVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSC  487 (504)
Q Consensus       411 y~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~  487 (504)
                      |+.+++|.+++...+ +.+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.....  .....
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  160 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYLSEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHTF  160 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCccccc
Confidence            999999999886554 788889999999999999999999999999999999999999999999998753322  23345


Q ss_pred             cCCCcccccccccCC
Q 010676          488 RGTAFWMAPEVCSNP  502 (504)
Q Consensus       488 ~GT~~YmAPEVL~g~  502 (504)
                      +||+.|+|||++.+.
T Consensus       161 ~gt~~y~aPE~~~~~  175 (323)
T cd05584         161 CGTIEYMAPEILMRS  175 (323)
T ss_pred             CCCccccChhhccCC
Confidence            699999999998754


No 62 
>PHA03211 serine/threonine kinase US3; Provisional
Probab=99.96  E-value=2.4e-28  Score=262.59  Aligned_cols=163  Identities=27%  Similarity=0.286  Sum_probs=140.0

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ...|.+.+.||+|+||.||+|.+ .++..||||....           ..+.+|+.+|++++|+|||++++++...+..|
T Consensus       168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~~-----------~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~  236 (461)
T PHA03211        168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGWY-----------ASSVHEARLLRRLSHPAVLALLDVRVVGGLTC  236 (461)
T ss_pred             cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEecccc-----------cCHHHHHHHHHHCCCCCCCcEEEEEEECCEEE
Confidence            34799999999999999999998 5678899995321           23468999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          407 IFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      +||+++. ++|..++...  .+++..++.|+.||+.||.|||++|||||||||+||||+.++.+||+|||+++...... 
T Consensus       237 lv~e~~~-~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~  315 (461)
T PHA03211        237 LVLPKYR-SDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWS  315 (461)
T ss_pred             EEEEccC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccc
Confidence            9999996 5787777543  58999999999999999999999999999999999999999999999999987654322 


Q ss_pred             ---cccccCCCcccccccccCC
Q 010676          484 ---VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ---~~s~~GT~~YmAPEVL~g~  502 (504)
                         .....||+.|||||++.+.
T Consensus       316 ~~~~~~~~GT~~Y~APE~~~~~  337 (461)
T PHA03211        316 TPFHYGIAGTVDTNAPEVLAGD  337 (461)
T ss_pred             cccccccCCCcCCcCHHHHcCC
Confidence               1234699999999998765


No 63 
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=99.96  E-value=2.9e-28  Score=248.60  Aligned_cols=170  Identities=26%  Similarity=0.410  Sum_probs=145.3

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||++.. .++..||+|++.....  ........+.+|+.++..++|+||+++++++.+.+.+|+
T Consensus         1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   78 (332)
T cd05623           1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEM--LKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYL   78 (332)
T ss_pred             CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHH--HHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEE
Confidence            3689999999999999999997 5678899998854221  122233457789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      ||||+.+|+|.+++.+  ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||++.......  
T Consensus        79 v~ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~  158 (332)
T cd05623          79 VMDYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV  158 (332)
T ss_pred             EEeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcc
Confidence            9999999999999976  458899999999999999999999999999999999999999999999999987543222  


Q ss_pred             -cccccCCCccccccccc
Q 010676          484 -VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~  500 (504)
                       ....+||+.|||||++.
T Consensus       159 ~~~~~~gt~~y~aPE~~~  176 (332)
T cd05623         159 QSSVAVGTPDYISPEILQ  176 (332)
T ss_pred             eecccccCccccCHHHHh
Confidence             12346999999999985


No 64 
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=99.96  E-value=2.3e-28  Score=245.00  Aligned_cols=169  Identities=30%  Similarity=0.482  Sum_probs=142.7

Q ss_pred             ccceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .++|++.+.||+|+||.||+|.+. ++..||+|++.......    ....+.+|+.+++.++||||+++++++.+...+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~----~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~   79 (303)
T cd07869           4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEG----TPFTAIREASLLKGLKHANIVLLHDIIHTKETLT   79 (303)
T ss_pred             cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccc----cchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEE
Confidence            357999999999999999999984 78999999886432211    1234668999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          407 IFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      +||||+.+ +|.+++..  ..+.+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  
T Consensus        80 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  158 (303)
T cd07869          80 LVFEYVHT-DLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSH  158 (303)
T ss_pred             EEEECCCc-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCc
Confidence            99999964 67776654  34889999999999999999999999999999999999999999999999998754322  


Q ss_pred             CcccccCCCcccccccccC
Q 010676          483 DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g  501 (504)
                      ......||+.|||||++.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (303)
T cd07869         159 TYSNEVVTLWYRPPDVLLG  177 (303)
T ss_pred             cCCCCcccCCCCChHHHcC
Confidence            2334568999999999864


No 65 
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=99.96  E-value=2.8e-28  Score=244.18  Aligned_cols=170  Identities=29%  Similarity=0.368  Sum_probs=141.8

Q ss_pred             cceeeeeeecccCceeEEEEEcc-----------------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCc
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-----------------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN  391 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-----------------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn  391 (504)
                      ++|++.+.||+|+||.||+|.+.                 ++..||+|.+....    .......+.+|+.++..++|||
T Consensus         5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~n   80 (304)
T cd05096           5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDA----NKNARNDFLKEVKILSRLKDPN   80 (304)
T ss_pred             hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCC----CHHHHHHHHHHHHHHhhcCCCC
Confidence            57899999999999999999753                 23479999875422    1233467889999999999999


Q ss_pred             eeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcC--------------------CChHHHHHHHHHHHHHHHHHHHCCce
Q 010676          392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH--------------------LRDSQVSAYTRQILLGLKYLHDQDVV  451 (504)
Q Consensus       392 IV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~--------------------l~e~~v~~i~~QIl~gL~yLHs~gII  451 (504)
                      |+++++++...+.+|+||||+.+++|.+++....                    +++..+..++.||+.||.|||++||+
T Consensus        81 iv~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~iv  160 (304)
T cd05096          81 IIRLLGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLSSLNFV  160 (304)
T ss_pred             eeEEEEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCcc
Confidence            9999999999999999999999999999886532                    46677889999999999999999999


Q ss_pred             ecCCCCCcEEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          452 HRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       452 HRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||||||+|||++.++.+||+|||+++......    .....++..|||||++.++
T Consensus       161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  215 (304)
T cd05096         161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMG  215 (304)
T ss_pred             ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcC
Confidence            99999999999999999999999987654332    1233467889999987654


No 66 
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes 
Probab=99.96  E-value=2.6e-28  Score=241.38  Aligned_cols=171  Identities=25%  Similarity=0.417  Sum_probs=145.6

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|++ .++..||+|++......   ......+.+|+.+++.++|+||+++++++...+.+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   77 (287)
T cd07848           1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEEN---EEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYL   77 (287)
T ss_pred             CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEeccccc---ccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEE
Confidence            3689999999999999999998 47889999988653322   2233567789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      ||||+.++.|..+... ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......   
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~  157 (287)
T cd07848          78 VFEYVEKNMLELLEEMPNGVPPEKVRSYIYQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNAN  157 (287)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccccc
Confidence            9999999877665543 458999999999999999999999999999999999999999999999999987654322   


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....||+.|+|||++.+.
T Consensus       158 ~~~~~~~~~y~aPE~~~~~  176 (287)
T cd07848         158 YTEYVATRWYRSPELLLGA  176 (287)
T ss_pred             ccccccccccCCcHHHcCC
Confidence            2345689999999998764


No 67 
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=99.96  E-value=3.6e-28  Score=246.67  Aligned_cols=171  Identities=25%  Similarity=0.410  Sum_probs=143.7

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +|++.+.||+|+||.||+|.+ .++..||+|++.....  ........+..|..++..+ +|++|+++++++...+.+|+
T Consensus         1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05616           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV--IQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYF   78 (323)
T ss_pred             CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEE
Confidence            488899999999999999988 4778999998864321  1122334566777887776 58999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Cc
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~  484 (504)
                      ||||+++|+|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  ..
T Consensus        79 v~E~~~~g~L~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~  158 (323)
T cd05616          79 VMEYVNGGDLMYQIQQVGRFKEPHAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTT  158 (323)
T ss_pred             EEcCCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCcc
Confidence            9999999999988765 45899999999999999999999999999999999999999999999999998754322  23


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ...+||+.|||||++.++
T Consensus       159 ~~~~gt~~y~aPE~~~~~  176 (323)
T cd05616         159 KTFCGTPDYIAPEIIAYQ  176 (323)
T ss_pred             ccCCCChhhcCHHHhcCC
Confidence            445799999999998765


No 68 
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=99.96  E-value=2.7e-28  Score=248.81  Aligned_cols=166  Identities=27%  Similarity=0.459  Sum_probs=141.7

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .++..||+|++.....  ........+..|+.++..+ +||||+++++++.+.+.+|+||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~--~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~   78 (329)
T cd05588           1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELV--NDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFV   78 (329)
T ss_pred             CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCC
Confidence            4699999999999998 5789999999874321  1223345678899999888 6999999999999999999999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--cCCcccccC
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--~~~~~s~~G  489 (504)
                      ++++|..++.. ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...  .......+|
T Consensus        79 ~~g~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (329)
T cd05588          79 SGGDLMFHMQRQRKLPEEHARFYSAEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG  158 (329)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence            99999987754 469999999999999999999999999999999999999999999999999987522  222344579


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (329)
T cd05588         159 TPNYIAPEILRGE  171 (329)
T ss_pred             CccccCHHHHcCC
Confidence            9999999998764


No 69 
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.96  E-value=5.1e-28  Score=246.68  Aligned_cols=171  Identities=27%  Similarity=0.406  Sum_probs=149.8

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .++|++.+.||+|+||.||++.+ .++..+|+|.+....    .......+.+|+.+|+.++||||+++++++..++.+|
T Consensus         4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (331)
T cd06649           4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEI----KPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS   79 (331)
T ss_pred             cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEE
Confidence            36899999999999999999998 578899999886421    1223467889999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQ-DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~-gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      +||||+++++|.+++... .+++..+..++.|++.||.|||++ +|+||||||+|||++.++.+||+|||++........
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~  159 (331)
T cd06649          80 ICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA  159 (331)
T ss_pred             EEeecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCccccccccccc
Confidence            999999999999988764 588999999999999999999986 699999999999999999999999999876654445


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....||+.|+|||++.+.
T Consensus       160 ~~~~g~~~y~aPE~~~~~  177 (331)
T cd06649         160 NSFVGTRSYMSPERLQGT  177 (331)
T ss_pred             ccCCCCcCcCCHhHhcCC
Confidence            556799999999998764


No 70 
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=99.96  E-value=3.1e-28  Score=250.39  Aligned_cols=167  Identities=29%  Similarity=0.466  Sum_probs=142.5

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ...+|++++.||+|+||.||+|++ .+++.||||++....    .......+.+|+.+++.++|+||+++++++...+.+
T Consensus        72 ~~~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~  147 (353)
T PLN00034         72 SLSELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNH----EDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEI  147 (353)
T ss_pred             CHHHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCC----cHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeE
Confidence            356788899999999999999998 578999999885322    123345688999999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          406 YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |+||||+.+++|...   ....+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++......  
T Consensus       148 ~lv~e~~~~~~L~~~---~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~  224 (353)
T PLN00034        148 QVLLEFMDGGSLEGT---HIADEQFLADVARQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDP  224 (353)
T ss_pred             EEEEecCCCCccccc---ccCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceeccccccc
Confidence            999999999988643   235677788999999999999999999999999999999999999999999987654322  


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....||..|+|||++.
T Consensus       225 ~~~~~gt~~y~aPE~~~  241 (353)
T PLN00034        225 CNSSVGTIAYMSPERIN  241 (353)
T ss_pred             ccccccCccccCccccc
Confidence            23457999999999884


No 71 
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt 
Probab=99.96  E-value=3.3e-28  Score=247.14  Aligned_cols=166  Identities=31%  Similarity=0.461  Sum_probs=136.9

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHH-HHHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEI-ALLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei-~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      +.||+|+||+||+|.+ .++..||+|++......  .......+..|. .+++.++|+||+++++++...+.+|+||||+
T Consensus         1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05602           1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAIL--KKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYI   78 (325)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHH--hhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCC
Confidence            4699999999999998 57789999988642211  112223344444 4567899999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      .+++|..++... .+.+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....  ......+|
T Consensus        79 ~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  158 (325)
T cd05602          79 NGGELFYHLQRERCFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG  158 (325)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence            999999988654 488889999999999999999999999999999999999999999999999875322  22345579


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (325)
T cd05602         159 TPEYLAPEVLHKQ  171 (325)
T ss_pred             CccccCHHHHcCC
Confidence            9999999998764


No 72 
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=99.96  E-value=3e-28  Score=246.40  Aligned_cols=165  Identities=32%  Similarity=0.491  Sum_probs=141.3

Q ss_pred             eeecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEE
Q 010676          335 DLLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       335 k~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      +.||+|+||.||++.+    .+|..||+|++......   ......+.+|+.+|.+++||||+++++++.+.+.+|+|||
T Consensus         2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e   78 (318)
T cd05582           2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLK---VRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILD   78 (318)
T ss_pred             ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhh---hhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEc
Confidence            5799999999999875    46889999998643221   1223456789999999999999999999999999999999


Q ss_pred             eccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Ccccc
Q 010676          411 LVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSC  487 (504)
Q Consensus       411 y~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~  487 (504)
                      |+.+++|.+++... .+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  .....
T Consensus        79 ~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~  158 (318)
T cd05582          79 FLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSF  158 (318)
T ss_pred             CCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceecc
Confidence            99999999988654 5899999999999999999999999999999999999999999999999998764433  23345


Q ss_pred             cCCCcccccccccCC
Q 010676          488 RGTAFWMAPEVCSNP  502 (504)
Q Consensus       488 ~GT~~YmAPEVL~g~  502 (504)
                      .||+.|||||++.+.
T Consensus       159 ~g~~~y~aPE~~~~~  173 (318)
T cd05582         159 CGTVEYMAPEVVNRR  173 (318)
T ss_pred             cCChhhcCHHHHcCC
Confidence            799999999998754


No 73 
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=99.96  E-value=4.4e-28  Score=246.25  Aligned_cols=166  Identities=32%  Similarity=0.462  Sum_probs=138.1

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHH-HHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIA-LLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .+|..||+|++......  .......+..|.. +++.++||||+++++++...+.+|+||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~   78 (325)
T cd05604           1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVL--NRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFV   78 (325)
T ss_pred             CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCC
Confidence            4699999999999998 57899999988643211  1122344555554 567799999999999999999999999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--cCCcccccC
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--~~~~~s~~G  489 (504)
                      .+++|..++.. ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++...  .......+|
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (325)
T cd05604          79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG  158 (325)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence            99999887765 458999999999999999999999999999999999999999999999999987532  222345579


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.++
T Consensus       159 t~~y~aPE~~~~~  171 (325)
T cd05604         159 TPEYLAPEVIRKQ  171 (325)
T ss_pred             ChhhCCHHHHcCC
Confidence            9999999998765


No 74 
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=99.96  E-value=4.2e-28  Score=246.18  Aligned_cols=166  Identities=33%  Similarity=0.482  Sum_probs=137.7

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHH-HHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIA-LLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      +.||+|+||+||+|.+ .+|..||+|++......  .......+..|.. +++.++||||+++++++...+.+|+||||+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~   78 (323)
T cd05575           1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAIL--KKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYV   78 (323)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHh--hhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCC
Confidence            4699999999999998 57999999988643211  1122334455544 567899999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      .+++|..++... .+.+..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++....  ......+|
T Consensus        79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (323)
T cd05575          79 NGGELFFHLQRERSFPEPRARFYAAEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG  158 (323)
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence            999999888654 588999999999999999999999999999999999999999999999999875322  22334569


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.++
T Consensus       159 t~~y~aPE~~~~~  171 (323)
T cd05575         159 TPEYLAPEVLRKQ  171 (323)
T ss_pred             ChhhcChhhhcCC
Confidence            9999999998764


No 75 
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=99.96  E-value=5e-28  Score=245.14  Aligned_cols=166  Identities=31%  Similarity=0.484  Sum_probs=137.5

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHH-HHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIA-LLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~-iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .++..||+|++......  .......+..|+. +++.++||||+++++++.+.+.+|+||||+
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~   78 (321)
T cd05603           1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTIL--KKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYV   78 (321)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHH--HhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCC
Confidence            4699999999999998 57889999988642211  1222344555554 678899999999999999999999999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      ++++|..++.. ..+.+..+..|+.||+.||.|||++||+||||||+||||+.+|.+||+|||+++....  ......+|
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05603          79 NGGELFFHLQRERCFLEPRARFYAAEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG  158 (321)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence            99999887765 4588999999999999999999999999999999999999999999999999875322  22334569


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|+|||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (321)
T cd05603         159 TPEYLAPEVLRKE  171 (321)
T ss_pred             CcccCCHHHhcCC
Confidence            9999999998764


No 76 
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=99.96  E-value=5.2e-28  Score=246.97  Aligned_cols=166  Identities=28%  Similarity=0.464  Sum_probs=140.8

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      +.||+|+||.||+|.+ .++..||+|++......  .......+.+|+.++.++ +||||+++++++...+.+|+||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~--~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~   78 (329)
T cd05618           1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVN--DDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV   78 (329)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhc--chhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCC
Confidence            4699999999999998 57889999998753221  123345677888888776 7999999999999999999999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      ++++|..++.. ..+++..+..|+.||+.||.|||++||+||||||+||||+.++.+||+|||+++....  ......+|
T Consensus        79 ~~~~L~~~~~~~~~l~~~~~~~i~~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (329)
T cd05618          79 NGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG  158 (329)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence            99999887765 4599999999999999999999999999999999999999999999999999875322  22334579


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|+|||++.++
T Consensus       159 t~~y~aPE~~~~~  171 (329)
T cd05618         159 TPNYIAPEILRGE  171 (329)
T ss_pred             CccccCHHHHcCC
Confidence            9999999998765


No 77 
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=99.95  E-value=4.7e-28  Score=245.00  Aligned_cols=168  Identities=28%  Similarity=0.486  Sum_probs=140.0

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC-----C
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE-----S  403 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-----~  403 (504)
                      +|++.+.||+|+||.||+|++ .++..||||.+......   ......+.+|+.+++.++||||+++++++...     .
T Consensus         1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~   77 (338)
T cd07859           1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEH---VSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFK   77 (338)
T ss_pred             CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhcc---chhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCc
Confidence            589999999999999999997 57899999987632211   12235678999999999999999999887533     3


Q ss_pred             eEEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .+|+||||+. ++|.+++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        78 ~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~  156 (338)
T cd07859          78 DIYVVFELME-SDLHQVIKANDDLTPEHHQFFLYQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFND  156 (338)
T ss_pred             eEEEEEecCC-CCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccc
Confidence            5899999996 5788877654 5899999999999999999999999999999999999999999999999998754322


Q ss_pred             C-----cccccCCCcccccccccC
Q 010676          483 D-----VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~-----~~s~~GT~~YmAPEVL~g  501 (504)
                      .     .....||+.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~t~~y~aPE~~~~  180 (338)
T cd07859         157 TPTAIFWTDYVATRWYRAPELCGS  180 (338)
T ss_pred             cCccccccCCCCCCCcCCHHHHhc
Confidence            1     234569999999999865


No 78 
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=99.95  E-value=5.1e-28  Score=245.43  Aligned_cols=166  Identities=27%  Similarity=0.483  Sum_probs=137.5

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhh-CCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR-FEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .++..||+|.+......  .......+..|..++.. ++||||+++++++...+.+|+||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~   78 (316)
T cd05592           1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVL--EDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYL   78 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence            4699999999999998 57889999988643211  11223344556666654 47999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      ++|+|..++... .+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++....  ......+|
T Consensus        79 ~gg~L~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g  158 (316)
T cd05592          79 NGGDLMFHIQSSGRFDEARARFYAAEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG  158 (316)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence            999999888654 589999999999999999999999999999999999999999999999999875432  22344579


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (316)
T cd05592         159 TPDYIAPEILKGQ  171 (316)
T ss_pred             CccccCHHHHcCC
Confidence            9999999998764


No 79 
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=99.95  E-value=5.8e-28  Score=245.70  Aligned_cols=171  Identities=25%  Similarity=0.413  Sum_probs=144.2

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyL  407 (504)
                      .|+..+.||+|+||.||+|.+ .++..||+|++.....  ........+..|+.++..+. |++|+++++++.+.+.+|+
T Consensus         1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~l   78 (323)
T cd05615           1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVV--IQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYF   78 (323)
T ss_pred             CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEE
Confidence            377889999999999999997 5789999998864221  11233456778888888876 5788889999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Cc
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~  484 (504)
                      ||||+++|+|..++.. ..+++.++..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....  ..
T Consensus        79 v~Ey~~~g~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~  158 (323)
T cd05615          79 VMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTT  158 (323)
T ss_pred             EEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccc
Confidence            9999999999998866 45899999999999999999999999999999999999999999999999998754322  23


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....||+.|||||++.++
T Consensus       159 ~~~~gt~~y~aPE~~~~~  176 (323)
T cd05615         159 RTFCGTPDYIAPEIIAYQ  176 (323)
T ss_pred             cCccCCccccCHHHHcCC
Confidence            345699999999998765


No 80 
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=99.95  E-value=4.9e-28  Score=245.93  Aligned_cols=166  Identities=29%  Similarity=0.473  Sum_probs=139.5

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .++..||+|++.....  ........+..|+.++..+ +||||+++++++...+.+|+||||+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~   78 (320)
T cd05590           1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVI--LQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFV   78 (320)
T ss_pred             CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHH--hhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCC
Confidence            4699999999999998 5788999998864221  1122345566788888776 6999999999999999999999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      ++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....  .......|
T Consensus        79 ~~g~L~~~i~~~~~l~~~~~~~~~~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (320)
T cd05590          79 NGGDLMFHIQKSRRFDEARARFYAAEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG  158 (320)
T ss_pred             CCchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence            99999988765 4589999999999999999999999999999999999999999999999999875322  22334569


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (320)
T cd05590         159 TPDYIAPEILQEM  171 (320)
T ss_pred             CccccCHHHHcCC
Confidence            9999999998764


No 81 
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=99.95  E-value=8.1e-28  Score=245.92  Aligned_cols=171  Identities=27%  Similarity=0.427  Sum_probs=148.3

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .++|++.+.||+|+||.||++.+ .++..+|+|.+.....    ......+.+|+.+++.++|+||++++++|..++.+|
T Consensus         4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   79 (333)
T cd06650           4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIK----PAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEIS   79 (333)
T ss_pred             hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccC----HHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEE
Confidence            35799999999999999999998 4788999998764321    223456889999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQ-DVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~-gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      +||||+.+++|.+++... .+++..+..++.|++.||.|||++ +|+|+||||+|||++.++.+||+|||++........
T Consensus        80 lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~  159 (333)
T cd06650          80 ICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMA  159 (333)
T ss_pred             EEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhcc
Confidence            999999999999988764 478888999999999999999975 799999999999999999999999999876544444


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....||..|+|||++.+.
T Consensus       160 ~~~~~~~~y~aPE~~~~~  177 (333)
T cd06650         160 NSFVGTRSYMSPERLQGT  177 (333)
T ss_pred             ccCCCCccccCHHHhcCC
Confidence            456799999999998764


No 82 
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, 
Probab=99.95  E-value=1.1e-27  Score=238.44  Aligned_cols=171  Identities=26%  Similarity=0.391  Sum_probs=145.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|++.+.||+|+||.||++.+ .++..||+|++......  .......+.+|+.+++.++|+||+++++++.+++.+|+|
T Consensus         1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   78 (285)
T cd05605           1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK--KRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLV   78 (285)
T ss_pred             CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhh--hhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEE
Confidence            378899999999999999998 57899999988642221  122234567899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-c
Q 010676          409 LELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-V  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~  484 (504)
                      |||+.+++|..++..   ..+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||++....... .
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~  158 (285)
T cd05605          79 LTLMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETI  158 (285)
T ss_pred             EeccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCcc
Confidence            999999999987743   248899999999999999999999999999999999999999999999999987654332 2


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....||+.|||||++.+.
T Consensus       159 ~~~~~~~~y~aPE~~~~~  176 (285)
T cd05605         159 RGRVGTVGYMAPEVVKNE  176 (285)
T ss_pred             ccccCCCCccCcHHhcCC
Confidence            345689999999998754


No 83 
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=99.95  E-value=6e-28  Score=244.84  Aligned_cols=166  Identities=29%  Similarity=0.441  Sum_probs=139.1

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .++..||+|++.....  ........+..|+.++..+ +||||+++++++...+.+|+||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~   78 (321)
T cd05591           1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVI--LQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYV   78 (321)
T ss_pred             CccccCCCeEEEEEEECCCCCEEEEEEEeHHHh--hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCC
Confidence            4699999999999998 5688999998864221  1123345566788888765 7999999999999999999999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--CcccccC
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~~G  489 (504)
                      ++++|..++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++......  .....+|
T Consensus        79 ~~~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05591          79 NGGDLMFQIQRSRKFDEPRSRFYAAEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG  158 (321)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence            99999987754 45889999999999999999999999999999999999999999999999998753322  2334569


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (321)
T cd05591         159 TPDYIAPEILQEL  171 (321)
T ss_pred             CccccCHHHHcCC
Confidence            9999999998764


No 84 
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=99.95  E-value=9.2e-28  Score=238.36  Aligned_cols=164  Identities=27%  Similarity=0.423  Sum_probs=139.6

Q ss_pred             ecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||+|+||+||++.+ .++..||+|.+.....  ........+..|+.+++.++|+||+++++++.....+|+||||+++|
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g   78 (280)
T cd05608           1 LGKGGFGEVSACQMRATGKLYACKKLNKKRL--KKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGG   78 (280)
T ss_pred             CCCCCceeEEEEEEccCCcEEEEEeeeHHHH--hhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCC
Confidence            79999999999998 5789999998864221  12233456778999999999999999999999999999999999999


Q ss_pred             CHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--ccccc
Q 010676          416 SLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSCR  488 (504)
Q Consensus       416 sL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~s~~  488 (504)
                      +|..++..     ..+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++.......  .....
T Consensus        79 ~L~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (280)
T cd05608          79 DLRYHIYNVDEENPGFPEPRACFYTAQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTKGYA  158 (280)
T ss_pred             CHHHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCccccccC
Confidence            99877632     348899999999999999999999999999999999999999999999999987654332  23456


Q ss_pred             CCCcccccccccCC
Q 010676          489 GTAFWMAPEVCSNP  502 (504)
Q Consensus       489 GT~~YmAPEVL~g~  502 (504)
                      ||+.|||||++.++
T Consensus       159 g~~~y~aPE~~~~~  172 (280)
T cd05608         159 GTPGFMAPELLQGE  172 (280)
T ss_pred             CCcCccCHHHhcCC
Confidence            99999999998764


No 85 
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=1e-28  Score=251.05  Aligned_cols=172  Identities=29%  Similarity=0.475  Sum_probs=149.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC---
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD---  401 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~---  401 (504)
                      .+..+|..++.||+|.||.|+.+.+ .+|..||||.+...   .......++..+|+++|+.++|+||+.+++.+..   
T Consensus        19 ~i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~---F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~   95 (359)
T KOG0660|consen   19 EIPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNP---FENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSR   95 (359)
T ss_pred             eccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhh---hhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccc
Confidence            3455677789999999999999998 68999999977521   2334455778899999999999999999998865   


Q ss_pred             --CCeEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          402 --ESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       402 --~~~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                        -+.+|+|+|+|+ .+|.++++... +++..+..+++||+.||+|+|+.||+||||||.|+|++.+..+||+|||||+.
T Consensus        96 ~~f~DvYiV~elMe-tDL~~iik~~~~L~d~H~q~f~YQiLrgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~  174 (359)
T KOG0660|consen   96 DKFNDVYLVFELME-TDLHQIIKSQQDLTDDHAQYFLYQILRGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARY  174 (359)
T ss_pred             cccceeEEehhHHh-hHHHHHHHcCccccHHHHHHHHHHHHHhcchhhcccccccccchhheeeccCCCEEeccccceee
Confidence              356999999995 58999999887 99999999999999999999999999999999999999999999999999998


Q ss_pred             cc----cCCcccccCCCcccccccccC
Q 010676          479 TK----LNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       479 ~~----~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      ..    ...++.++.|.+|.|||++..
T Consensus       175 ~~~~~~~~~mTeYVaTRWYRAPElll~  201 (359)
T KOG0660|consen  175 LDKFFEDGFMTEYVATRWYRAPELLLN  201 (359)
T ss_pred             ccccCcccchhcceeeeeecCHHHHhc
Confidence            74    444677889999999998854


No 86 
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=99.95  E-value=1.1e-27  Score=257.74  Aligned_cols=169  Identities=27%  Similarity=0.408  Sum_probs=143.9

Q ss_pred             cceeeeeeecccCceeEEEEEcc-C-CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-D-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~-g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ..|.+.+.||+|+||.||+|... + +..|++|.+....     ......+.+|+.+|+.++|||||++++++...+.+|
T Consensus        67 ~~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~-----~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~  141 (478)
T PTZ00267         67 HMYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLND-----ERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLL  141 (478)
T ss_pred             eeEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCC-----HHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEE
Confidence            35999999999999999999873 4 6788888664322     222345678999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          407 IFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      |||||+++|+|.+++..     ..+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++....
T Consensus       142 lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~  221 (478)
T PTZ00267        142 LIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSD  221 (478)
T ss_pred             EEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCC
Confidence            99999999999987753     2488899999999999999999999999999999999999999999999999986543


Q ss_pred             CC----cccccCCCcccccccccCC
Q 010676          482 ND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..    ....+||+.|||||++.++
T Consensus       222 ~~~~~~~~~~~gt~~y~aPE~~~~~  246 (478)
T PTZ00267        222 SVSLDVASSFCGTPYYLAPELWERK  246 (478)
T ss_pred             ccccccccccCCCccccCHhHhCCC
Confidence            22    3345699999999998765


No 87 
>PHA03212 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=6.1e-28  Score=253.63  Aligned_cols=163  Identities=24%  Similarity=0.296  Sum_probs=140.7

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ...|++++.||+|+||.||+|.+ .+++.||+|...           ...+.+|+.+|+.++||||++++++|......|
T Consensus        91 ~~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~-----------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~  159 (391)
T PHA03212         91 KAGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ-----------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTC  159 (391)
T ss_pred             cCCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh-----------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeE
Confidence            35799999999999999999998 678999999542           134578999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc---C
Q 010676          407 IFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL---N  482 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~---~  482 (504)
                      +|||++. ++|..++.. ..+++..++.|+.||+.||.|||++|||||||||+||||+.++.+||+|||+++....   .
T Consensus       160 lv~e~~~-~~L~~~l~~~~~l~~~~~~~i~~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~  238 (391)
T PHA03212        160 LILPRYK-TDLYCYLAAKRNIAICDILAIERSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINAN  238 (391)
T ss_pred             EEEecCC-CCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCccccccccccc
Confidence            9999996 577776644 4689999999999999999999999999999999999999999999999999865322   2


Q ss_pred             CcccccCCCcccccccccCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....+||+.|+|||++.+.
T Consensus       239 ~~~~~~gt~~y~aPE~~~~~  258 (391)
T PHA03212        239 KYYGWAGTIATNAPELLARD  258 (391)
T ss_pred             ccccccCccCCCChhhhcCC
Confidence            23345799999999998764


No 88 
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=99.95  E-value=1e-27  Score=244.24  Aligned_cols=166  Identities=26%  Similarity=0.451  Sum_probs=141.6

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.++.++ +|+||+++++++...+.+|+||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   78 (327)
T cd05617           1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELV--HDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYV   78 (327)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCC
Confidence            4699999999999998 5788999999864321  2233456678899999887 5999999999999999999999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--cCCcccccC
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--~~~~~s~~G  489 (504)
                      ++++|..++.. ..+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++...  .......+|
T Consensus        79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (327)
T cd05617          79 NGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG  158 (327)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence            99999988765 469999999999999999999999999999999999999999999999999987532  222344679


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (327)
T cd05617         159 TPNYIAPEILRGE  171 (327)
T ss_pred             CcccCCHHHHCCC
Confidence            9999999998764


No 89 
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=99.95  E-value=3.4e-28  Score=250.71  Aligned_cols=148  Identities=27%  Similarity=0.438  Sum_probs=133.3

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .+.|++++.||.|.-|+||++.. .++..+|+|++......  ....+.+.+.|-+||..++||+++.||..|+++..+|
T Consensus        76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~--~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~c  153 (459)
T KOG0610|consen   76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLA--SRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSC  153 (459)
T ss_pred             HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHh--hhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeE
Confidence            45789999999999999999998 46699999998654332  2445677788999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          407 IFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      ++||||+||+|..+.++.   .|++..++.|+.+++.||+|||..|||+|||||+||||.++|+|.|+||.|+.
T Consensus       154 l~meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~  227 (459)
T KOG0610|consen  154 LVMEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSL  227 (459)
T ss_pred             EEEecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccc
Confidence            999999999999998764   39999999999999999999999999999999999999999999999999863


No 90 
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.95  E-value=1.9e-27  Score=244.85  Aligned_cols=172  Identities=28%  Similarity=0.423  Sum_probs=142.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC-
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES-  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-  403 (504)
                      .+.++|++.+.||+|+||.||++.+ .+|..||+|++.....   .......+.+|+.+++.++||||+++++++.... 
T Consensus        18 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   94 (359)
T cd07876          18 TVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQ---NQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKS   94 (359)
T ss_pred             hhhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEeccccc---chhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCC
Confidence            4567899999999999999999998 5789999998864321   1223456778999999999999999999886543 


Q ss_pred             -----eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          404 -----KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       404 -----~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                           .+|+||||+.+ +|...+. ..+++..+..++.||+.||.|||++||+||||||+|||++.+|.+||+|||+++.
T Consensus        95 ~~~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~  172 (359)
T cd07876          95 LEEFQDVYLVMELMDA-NLCQVIH-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  172 (359)
T ss_pred             ccccceeEEEEeCCCc-CHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccc
Confidence                 57999999986 4655553 3588899999999999999999999999999999999999999999999999876


Q ss_pred             cccCC-cccccCCCcccccccccCC
Q 010676          479 TKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       479 ~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..... .....||+.|+|||++.+.
T Consensus       173 ~~~~~~~~~~~~t~~y~aPE~~~~~  197 (359)
T cd07876         173 ACTNFMMTPYVVTRYYRAPEVILGM  197 (359)
T ss_pred             cccCccCCCCcccCCCCCchhccCC
Confidence            43322 3445689999999998764


No 91 
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=99.95  E-value=2.8e-27  Score=229.91  Aligned_cols=174  Identities=46%  Similarity=0.764  Sum_probs=149.8

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.|++.+.||+|+||.||+|.+ .++..|++|.+...............+.+|+.+++.++||||+++++++.....+|+
T Consensus         2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   81 (263)
T cd06625           2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI   81 (263)
T ss_pred             CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence            4689999999999999999997 578999999887544333334445678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      ||||+++++|.+++... .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||+++......   
T Consensus        82 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~  161 (263)
T cd06625          82 FMEYMPGGSVKDQLKAYGALTETVTRKYTRQILEGVEYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSG  161 (263)
T ss_pred             EEEECCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecccccccc
Confidence            99999999999988654 47888999999999999999999999999999999999999999999999987543221   


Q ss_pred             --cccccCCCcccccccccCC
Q 010676          484 --VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g~  502 (504)
                        .....|+..|+|||++.+.
T Consensus       162 ~~~~~~~~~~~y~aPE~~~~~  182 (263)
T cd06625         162 TGMKSVTGTPYWMSPEVISGE  182 (263)
T ss_pred             ccccCCCcCccccCcceeccC
Confidence              1334588999999998764


No 92 
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=99.95  E-value=1.3e-27  Score=236.72  Aligned_cols=170  Identities=31%  Similarity=0.491  Sum_probs=136.6

Q ss_pred             cceeeeeeecccCceeEEEEEc--cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC---CCCceeEEeeeec---
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS--DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---EHENIVQYYGTDK---  400 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~--~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~---  400 (504)
                      ++|++.+.||+|+||.||+|.+  .++..||+|.+.........   ...+.+|+.+++.+   +||||+++++++.   
T Consensus         1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~---~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~   77 (290)
T cd07862           1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGM---PLSTIREVAVLRHLETFEHPNVVRLFDVCTVSR   77 (290)
T ss_pred             CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCc---hHHHHHHHHHHHhhcccCCCCcceEEEEEeccc
Confidence            3689999999999999999987  35788999988653322211   12344566666554   6999999999874   


Q ss_pred             --CCCeEEEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCc
Q 010676          401 --DESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGL  475 (504)
Q Consensus       401 --~~~~lyLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGL  475 (504)
                        ....+|+||||+. ++|.+++..   ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+
T Consensus        78 ~~~~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~  156 (290)
T cd07862          78 TDRETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL  156 (290)
T ss_pred             CCCCCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccc
Confidence              3456999999997 488888764   3488899999999999999999999999999999999999999999999999


Q ss_pred             ccccccCC-cccccCCCcccccccccCC
Q 010676          476 AKATKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       476 A~~~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ++...... .....||+.|+|||++.+.
T Consensus       157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  184 (290)
T cd07862         157 ARIYSFQMALTSVVVTLWYRAPEVLLQS  184 (290)
T ss_pred             eEeccCCcccccccccccccChHHHhCC
Confidence            87654332 3345689999999998653


No 93 
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=99.95  E-value=1e-27  Score=243.83  Aligned_cols=163  Identities=33%  Similarity=0.502  Sum_probs=135.7

Q ss_pred             ecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC---CCCceeEEeeeecCCCeEEEEEEec
Q 010676          337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       337 LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ||+|+||+||+|.+ .++..||+|++.....  ........+..|..++..+   .||||+++++++.+.+.+|+||||+
T Consensus         1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~   78 (330)
T cd05586           1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEI--VAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYM   78 (330)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEEeHHHH--hhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCC
Confidence            79999999999998 5789999998864221  1122234455666666654   6999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      .+++|..++... .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||++.....  ......+|
T Consensus        79 ~~g~L~~~l~~~~~~~~~~~~~~~~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~g  158 (330)
T cd05586          79 SGGELFWHLQKEGRFSEDRAKFYIAELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTFCG  158 (330)
T ss_pred             CCChHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCccC
Confidence            999999887654 589999999999999999999999999999999999999999999999999875322  22345679


Q ss_pred             CCcccccccccC
Q 010676          490 TAFWMAPEVCSN  501 (504)
Q Consensus       490 T~~YmAPEVL~g  501 (504)
                      |+.|||||++.+
T Consensus       159 t~~y~aPE~~~~  170 (330)
T cd05586         159 TTEYLAPEVLLD  170 (330)
T ss_pred             CccccCHHHHcC
Confidence            999999999864


No 94 
>PF00069 Pkinase:  Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain;  InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=99.95  E-value=9.9e-28  Score=231.91  Aligned_cols=167  Identities=37%  Similarity=0.546  Sum_probs=145.2

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |++++.||+|+||+||++.+ .++..||+|.+.......   .......+|+.+++.++|+||+++++++.....+|+||
T Consensus         1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~---~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~   77 (260)
T PF00069_consen    1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEE---EEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVM   77 (260)
T ss_dssp             EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHH---HHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEE
T ss_pred             CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccc---cccchhhhhhhccccccccccccccccccccccccccc
Confidence            78999999999999999998 567799999987543322   22223446999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc--ccCCccc
Q 010676          410 ELVTKGSLLNLYQ-RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT--KLNDVKS  486 (504)
Q Consensus       410 Ey~~ggsL~~ll~-~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~--~~~~~~s  486 (504)
                      ||+.+++|.+++. ...++...+..++.||+.||.+||++||+|+||||+|||++.++.++|+|||++...  .......
T Consensus        78 ~~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~  157 (260)
T PF00069_consen   78 EYCPGGSLQDYLQKNKPLSEEEILKIAYQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNP  157 (260)
T ss_dssp             EEETTEBHHHHHHHHSSBBHHHHHHHHHHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999997 677999999999999999999999999999999999999999999999999998753  2223445


Q ss_pred             ccCCCccccccccc
Q 010676          487 CRGTAFWMAPEVCS  500 (504)
Q Consensus       487 ~~GT~~YmAPEVL~  500 (504)
                      ..+|..|+|||++.
T Consensus       158 ~~~~~~y~aPE~~~  171 (260)
T PF00069_consen  158 FVGTPEYMAPEVLQ  171 (260)
T ss_dssp             SSSSGGGSCHHHHT
T ss_pred             cccccccccccccc
Confidence            67899999999987


No 95 
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=99.95  E-value=1.1e-27  Score=242.85  Aligned_cols=166  Identities=28%  Similarity=0.470  Sum_probs=138.7

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhh-CCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR-FEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .+|..||+|.+......  .......+..|..++.. ++||||+++++++.+.+.+|+||||+
T Consensus         1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~   78 (316)
T cd05620           1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVL--IDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFL   78 (316)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCC
Confidence            4699999999999998 57889999988642211  11223445667777765 48999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--cCCcccccC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LNDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--~~~~~s~~G  489 (504)
                      .+++|..++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...  .......+|
T Consensus        79 ~~g~L~~~i~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05620          79 NGGDLMFHIQDKGRFDLYRATFYAAEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG  158 (316)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence            999999888654 58999999999999999999999999999999999999999999999999987532  222345679


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|+|||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (316)
T cd05620         159 TPDYIAPEILQGL  171 (316)
T ss_pred             CcCccCHHHHcCC
Confidence            9999999998764


No 96 
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=3e-29  Score=259.92  Aligned_cols=168  Identities=41%  Similarity=0.708  Sum_probs=151.6

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|...++||+|.||.||+|.+ .+++.||+|++.+..    .+..+..+++|+.+|.+++++||.++|+.+..+..+|++
T Consensus        14 ~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~----~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~Lwii   89 (467)
T KOG0201|consen   14 LYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEE----AEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWII   89 (467)
T ss_pred             ccccchhccccccceeeeeeeccccceEEEEEechhh----cchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHH
Confidence            567779999999999999998 789999999997633    344567788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcCC-ChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--cc
Q 010676          409 LELVTKGSLLNLYQRYHL-RDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VK  485 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~l-~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~  485 (504)
                      ||||.||++.++++.+.+ .+..+..++++++.||.|||.++.+|||||+.|||+..+|.|||+|||.+.......  ..
T Consensus        90 Mey~~gGsv~~lL~~~~~~~E~~i~~ilre~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~  169 (467)
T KOG0201|consen   90 MEYCGGGSVLDLLKSGNILDEFEIAVILREVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRK  169 (467)
T ss_pred             HHHhcCcchhhhhccCCCCccceeeeehHHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccc
Confidence            999999999999998876 888899999999999999999999999999999999999999999999987655433  35


Q ss_pred             cccCCCcccccccccC
Q 010676          486 SCRGTAFWMAPEVCSN  501 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g  501 (504)
                      .++||++||||||+.+
T Consensus       170 tfvGTPfwMAPEVI~~  185 (467)
T KOG0201|consen  170 TFVGTPFWMAPEVIKQ  185 (467)
T ss_pred             cccccccccchhhhcc
Confidence            6789999999999986


No 97 
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.95  E-value=4.8e-28  Score=254.51  Aligned_cols=170  Identities=32%  Similarity=0.479  Sum_probs=146.8

Q ss_pred             eee--eeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          331 WQK--GDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       331 y~i--~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      |++  .++||.|.||+||-|+. ++|+.||||++.+.......   ...+.+|+.||+++.||.||.+-..|++.+.+|.
T Consensus       564 YQif~devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kq---esqlR~EVaILq~l~HPGiV~le~M~ET~ervFV  640 (888)
T KOG4236|consen  564 YQIFADEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQ---ESQLRNEVAILQNLHHPGIVNLECMFETPERVFV  640 (888)
T ss_pred             HHhhhHhhccCCcceeeecceecccCceeeeeeeecccCCCch---HHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEE
Confidence            554  47899999999999998 79999999998765433322   2678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHH--hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC---CcEEEEecCcccccccC
Q 010676          408 FLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN---GSVKLADFGLAKATKLN  482 (504)
Q Consensus       408 VmEy~~ggsL~~ll~--~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~---g~VKL~DFGLA~~~~~~  482 (504)
                      |||-+.|.-|.-++.  .+++++...+.++.||+.||.|||-+||+|+||||+|||+...   -.+||||||+|+.+...
T Consensus       641 VMEKl~GDMLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEk  720 (888)
T KOG4236|consen  641 VMEKLHGDMLEMILSSEKGRLPERITKFLVTQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEK  720 (888)
T ss_pred             EehhhcchHHHHHHHhhcccchHHHHHHHHHHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchh
Confidence            999998866665553  4569999999999999999999999999999999999999754   47999999999998766


Q ss_pred             C-cccccCCCcccccccccCCC
Q 010676          483 D-VKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       483 ~-~~s~~GT~~YmAPEVL~g~~  503 (504)
                      . ..+.+|||.|+|||||.++-
T Consensus       721 sFRrsVVGTPAYLaPEVLrnkG  742 (888)
T KOG4236|consen  721 SFRRSVVGTPAYLAPEVLRNKG  742 (888)
T ss_pred             hhhhhhcCCccccCHHHHhhcc
Confidence            5 45678999999999998763


No 98 
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95  E-value=1.2e-28  Score=264.17  Aligned_cols=179  Identities=35%  Similarity=0.661  Sum_probs=152.4

Q ss_pred             CCCCccccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEe
Q 010676          318 ISPNGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYY  396 (504)
Q Consensus       318 ~sp~~~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~  396 (504)
                      .++.++|.++      ...||+|.|-+||+|.+ .+|..||--.++..+. .+....+++|..|+.+|+.|+|+||+++|
T Consensus        35 ~~p~gRy~k~------~evLGrGafKtVYka~De~~giEVAWnqvk~~d~-~q~~~~leR~~~Ev~lLKsL~H~NIirfy  107 (632)
T KOG0584|consen   35 KDPTGRYLKF------DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDV-TQSPEELERLYSEVHLLKSLKHPNIIRFY  107 (632)
T ss_pred             cCCCCceeeh------hhhcccccceeeeeccccccchhhHHHHHhHHHh-hcChHHHHHHHHHHHHHccCCCCceeeee
Confidence            3455655443      46799999999999999 5788888665554333 23345568899999999999999999999


Q ss_pred             eeecCCCe--EEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEc-CCCcEEE
Q 010676          397 GTDKDESK--LYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQD--VVHRDIKCANILVD-ANGSVKL  470 (504)
Q Consensus       397 ~~~~~~~~--lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~g--IIHRDLKP~NILLd-~~g~VKL  470 (504)
                      ++|.+...  +.+|+|++..|+|..|.++. .++...++.|++||+.||.|||++.  |||||||++||||+ ..|.|||
T Consensus       108 ~SW~d~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~RQILkGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKI  187 (632)
T KOG0584|consen  108 DSWVDTDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWCRQILKGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKI  187 (632)
T ss_pred             eheecCCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHHHHHHHHhhhhhcCCCCccccccccceEEEcCCcCceee
Confidence            99987665  88999999999999999775 5899999999999999999999985  99999999999997 4589999


Q ss_pred             EecCcccccccCCcccccCCCcccccccccCCC
Q 010676          471 ADFGLAKATKLNDVKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       471 ~DFGLA~~~~~~~~~s~~GT~~YmAPEVL~g~~  503 (504)
                      +|+|||.........++.|||.|||||+....|
T Consensus       188 GDLGLAtl~r~s~aksvIGTPEFMAPEmYEE~Y  220 (632)
T KOG0584|consen  188 GDLGLATLLRKSHAKSVIGTPEFMAPEMYEENY  220 (632)
T ss_pred             cchhHHHHhhccccceeccCccccChHHHhhhc
Confidence            999999988877777889999999999987655


No 99 
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=99.95  E-value=1.5e-28  Score=242.53  Aligned_cols=177  Identities=27%  Similarity=0.470  Sum_probs=153.9

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccch---hhHHHHHHHHHHHHHHhhCC-CCceeEEeeeec
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGS---QAKQSISQLEQEIALLSRFE-HENIVQYYGTDK  400 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~---~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~  400 (504)
                      .+...|...+.||+|..++|-++.. .+|..+|+|++.......   ......+...+|+.||+++. ||+|+++.++++
T Consensus        14 ~fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~ye   93 (411)
T KOG0599|consen   14 GFYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYE   93 (411)
T ss_pred             hHHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeecc
Confidence            3445677788899999999998877 688999999886543332   33444556678999999985 999999999999


Q ss_pred             CCCeEEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          401 DESKLYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       401 ~~~~lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ++..+++|+|+|+.|.|++++... .++++....|++|++.|++|||.++||||||||+|||++.+.++||+|||+++.+
T Consensus        94 s~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iMrqlfegVeylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l  173 (411)
T KOG0599|consen   94 SDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIMRQLFEGVEYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQL  173 (411)
T ss_pred             CcchhhhhhhhcccchHHHHhhhheeecHHHHHHHHHHHHHHHHHHHHhhhhhcccChhheeeccccceEEeccceeecc
Confidence            999999999999999999999765 5999999999999999999999999999999999999999999999999999887


Q ss_pred             ccCC-cccccCCCcccccccccCC
Q 010676          480 KLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       480 ~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..+. ....||||+|+|||.+.-.
T Consensus       174 ~~GekLrelCGTPgYLAPEtikC~  197 (411)
T KOG0599|consen  174 EPGEKLRELCGTPGYLAPETIKCS  197 (411)
T ss_pred             CCchhHHHhcCCCcccChhheeee
Confidence            6654 6778999999999998643


No 100
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in 
Probab=99.95  E-value=1.7e-27  Score=241.79  Aligned_cols=166  Identities=30%  Similarity=0.503  Sum_probs=138.5

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhh-CCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR-FEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      +.||+|+||.||+|.+ .++..||+|++......  .......+..|..++.. ++||||+++++++.+.+.+|+||||+
T Consensus         1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~--~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~   78 (316)
T cd05619           1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVL--MDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYL   78 (316)
T ss_pred             CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhh--hcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCC
Confidence            4699999999999998 56889999988643211  11223445567777765 58999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      ++|+|..++... .+++.++..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....  .......|
T Consensus        79 ~~g~L~~~l~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05619          79 NGGDLMFHIQSCHKFDLPRATFYAAEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG  158 (316)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence            999999988764 588999999999999999999999999999999999999999999999999875322  22344569


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 t~~y~aPE~~~~~  171 (316)
T cd05619         159 TPDYIAPEILLGQ  171 (316)
T ss_pred             CccccCHHHHcCC
Confidence            9999999998765


No 101
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=99.95  E-value=1.7e-29  Score=246.12  Aligned_cols=173  Identities=31%  Similarity=0.510  Sum_probs=150.6

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      .+.+.|++.+.||+|.|+.||++.. .+|+.+|+|++........   ..+.+.+|+.|-+.|+|||||++.+...+...
T Consensus         8 ~f~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~---~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~   84 (355)
T KOG0033|consen    8 KFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR---DFQKLEREARICRKLQHPNIVRLHDSIQEESF   84 (355)
T ss_pred             ccchhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccc---cHHHHHHHHHHHHhcCCCcEeehhhhhcccce
Confidence            4557899999999999999999987 7899999998865443322   45788999999999999999999999999999


Q ss_pred             EEEEEEeccCCCHH-HHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC---CcEEEEecCcccccc
Q 010676          405 LYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN---GSVKLADFGLAKATK  480 (504)
Q Consensus       405 lyLVmEy~~ggsL~-~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~---g~VKL~DFGLA~~~~  480 (504)
                      .|||+|++.|++|. ++.++.-+++..+..+++||+.+|.|+|.+||||||+||.|+|+...   .-+||+|||+|....
T Consensus        85 ~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~rQiLeal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~  164 (355)
T KOG0033|consen   85 HYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILEALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN  164 (355)
T ss_pred             eEEEEecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence            99999999999986 46677779999999999999999999999999999999999999643   359999999998776


Q ss_pred             cCC-cccccCCCcccccccccC
Q 010676          481 LND-VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~~-~~s~~GT~~YmAPEVL~g  501 (504)
                      .+. ....+|||.||||||+..
T Consensus       165 ~g~~~~G~~GtP~fmaPEvvrk  186 (355)
T KOG0033|consen  165 DGEAWHGFAGTPGYLSPEVLKK  186 (355)
T ss_pred             CccccccccCCCcccCHHHhhc
Confidence            332 455679999999999874


No 102
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=99.95  E-value=5.4e-28  Score=255.53  Aligned_cols=173  Identities=30%  Similarity=0.466  Sum_probs=148.7

Q ss_pred             cccccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          323 RFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       323 ~~~~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      .+..-...+++++.||+|-||.||+|.+.....||+|.++....      ....|.+|+.+|++|+|+|||+++++|..+
T Consensus       200 ~wei~r~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~m------~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~  273 (468)
T KOG0197|consen  200 PWEIPREELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGSM------SPEAFLREAQIMKKLRHEKLVKLYGVCTKQ  273 (468)
T ss_pred             CeeecHHHHHHHHHhcCCccceEEEEEEcCCCcccceEEecccc------ChhHHHHHHHHHHhCcccCeEEEEEEEecC
Confidence            33344456778899999999999999998888999998875322      125677999999999999999999999998


Q ss_pred             CeEEEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ..+||||||+..|+|.++++.   ..+...+.+.++.||+.|++||+++++|||||...||||++++.+||+|||||+..
T Consensus       274 ~piyIVtE~m~~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~  353 (468)
T KOG0197|consen  274 EPIYIVTEYMPKGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLI  353 (468)
T ss_pred             CceEEEEEecccCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHHhCCccchhhhhhheeeccCceEEEccccccccc
Confidence            899999999999999999986   34888999999999999999999999999999999999999999999999999966


Q ss_pred             ccCCcccccC---CCcccccccccC
Q 010676          480 KLNDVKSCRG---TAFWMAPEVCSN  501 (504)
Q Consensus       480 ~~~~~~s~~G---T~~YmAPEVL~g  501 (504)
                      ..+......|   ...|.|||.|.-
T Consensus       354 ~d~~Y~~~~~~kfPIkWtAPEa~~~  378 (468)
T KOG0197|consen  354 GDDEYTASEGGKFPIKWTAPEALNY  378 (468)
T ss_pred             CCCceeecCCCCCCceecCHHHHhh
Confidence            5555443333   345999998874


No 103
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is 
Probab=99.95  E-value=1.4e-27  Score=243.79  Aligned_cols=171  Identities=27%  Similarity=0.432  Sum_probs=145.2

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--  402 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--  402 (504)
                      .+.++|++++.||+|+||.||+|.+ .++..||+|.+....   ........+.+|+.+|+.++|+||+++++++...  
T Consensus        12 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (343)
T cd07878          12 EVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPF---QSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATS   88 (343)
T ss_pred             hhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchh---hhhHHHHHHHHHHHHHHhcCCCchhhhhhhhccccc
Confidence            4557899999999999999999997 578899999875322   1122345577899999999999999999887543  


Q ss_pred             ----CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          403 ----SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       403 ----~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                          ..+|++|+++ +++|..++....+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        89 ~~~~~~~~~~~~~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~  167 (343)
T cd07878          89 IENFNEVYLVTNLM-GADLNNIVKCQKLSDEHVQFLIYQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQ  167 (343)
T ss_pred             ccccCcEEEEeecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCcccee
Confidence                4579999988 67899988888899999999999999999999999999999999999999999999999999986


Q ss_pred             cccCCcccccCCCcccccccccC
Q 010676          479 TKLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       479 ~~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      .... .....||+.|+|||++.+
T Consensus       168 ~~~~-~~~~~~t~~y~aPE~~~~  189 (343)
T cd07878         168 ADDE-MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             cCCC-cCCccccccccCchHhcC
Confidence            5433 344569999999999876


No 104
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=99.95  E-value=1.4e-27  Score=257.33  Aligned_cols=165  Identities=29%  Similarity=0.422  Sum_probs=144.4

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-C-----CceeEEeeeecCC
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-H-----ENIVQYYGTDKDE  402 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-H-----pnIV~l~~~~~~~  402 (504)
                      +|.++++||+|+||.|-+|++ .+++.||||+++..      +....+-..|+.+|..|+ |     -|||+++++|...
T Consensus       187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~------k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr  260 (586)
T KOG0667|consen  187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNK------KRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFR  260 (586)
T ss_pred             EEEEEEEecccccceeEEEEecCCCcEEEEEeeccC------hHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccc
Confidence            799999999999999999999 68999999999743      334455668999999987 4     3899999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC--CcEEEEecCccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN--GSVKLADFGLAK  477 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~--g~VKL~DFGLA~  477 (504)
                      +++|||+|++.. +|.++++.++   ++...++.++.||+.||.+||++||||+||||+||||..-  ..|||+|||.+.
T Consensus       261 ~HlciVfELL~~-NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc  339 (586)
T KOG0667|consen  261 NHLCIVFELLST-NLYELLKNNKFRGLSLPLVRKFAQQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSC  339 (586)
T ss_pred             cceeeeehhhhh-hHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEeccccc
Confidence            999999999965 8999998764   7889999999999999999999999999999999999743  379999999998


Q ss_pred             ccccCCcccccCCCcccccccccCC
Q 010676          478 ATKLNDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       478 ~~~~~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ....... .+..+..|+|||||.|.
T Consensus       340 ~~~q~vy-tYiQSRfYRAPEVILGl  363 (586)
T KOG0667|consen  340 FESQRVY-TYIQSRFYRAPEVILGL  363 (586)
T ss_pred             ccCCcce-eeeeccccccchhhccC
Confidence            7665544 67789999999999875


No 105
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=99.95  E-value=2.4e-27  Score=240.38  Aligned_cols=166  Identities=29%  Similarity=0.478  Sum_probs=140.5

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||+|+||.||+|.+ .++..||+|++.....  ........+.+|+.++..+ +||||+++++++...+.+|+||||+
T Consensus         1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~   78 (318)
T cd05570           1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVI--LQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYV   78 (318)
T ss_pred             CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHH--hhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCC
Confidence            4699999999999988 4688999998864321  1122345567888888877 6999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--CCcccccC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--NDVKSCRG  489 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~~~~s~~G  489 (504)
                      .+++|..++... .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++....  ......+|
T Consensus        79 ~~~~L~~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (318)
T cd05570          79 NGGDLMFHIQRSGRFDEPRARFYAAEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG  158 (318)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence            999999888765 699999999999999999999999999999999999999999999999999875322  22334569


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |+.|||||++.+.
T Consensus       159 ~~~y~aPE~~~~~  171 (318)
T cd05570         159 TPDYIAPEILSYQ  171 (318)
T ss_pred             CccccCHHHhcCC
Confidence            9999999998764


No 106
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=99.95  E-value=2.5e-28  Score=253.60  Aligned_cols=175  Identities=26%  Similarity=0.388  Sum_probs=150.9

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ..+.|..-++||+||||.||-+.. .+|+.||+|.+.....  ..+....-.++|-.+|.+++.++||.+-.+|++.+.+
T Consensus       183 t~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRi--Kkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~L  260 (591)
T KOG0986|consen  183 TKNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRI--KKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDAL  260 (591)
T ss_pred             cccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHH--HHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCce
Confidence            345788889999999999999887 6899999997643222  2233334567899999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHH-Hhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          406 YIFLELVTKGSLLNLY-QRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll-~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      |+||.+|.||+|.-++ +.+  +|++..+..|+.+|+.||++||..+||+|||||+|||+|+.|+|.|+|+|||..+..+
T Consensus       261 ClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g  340 (591)
T KOG0986|consen  261 CLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEG  340 (591)
T ss_pred             EEEEEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCC
Confidence            9999999999998654 333  6999999999999999999999999999999999999999999999999999987766


Q ss_pred             C-cccccCCCcccccccccCCC
Q 010676          483 D-VKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       483 ~-~~s~~GT~~YmAPEVL~g~~  503 (504)
                      . ...-+||.+||||||++++.
T Consensus       341 ~~~~~rvGT~GYMAPEvl~ne~  362 (591)
T KOG0986|consen  341 KPIRGRVGTVGYMAPEVLQNEV  362 (591)
T ss_pred             CccccccCcccccCHHHHcCCc
Confidence            5 44448999999999999863


No 107
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=99.95  E-value=5e-27  Score=232.31  Aligned_cols=166  Identities=30%  Similarity=0.431  Sum_probs=144.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.++||+|+||.||+|.+ .++..||+|.+....    .......+.+|+.++++++||||+++++++...+.+++|
T Consensus         2 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   77 (279)
T cd06619           2 DIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDI----TVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISIC   77 (279)
T ss_pred             cchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCC----ChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEE
Confidence            678899999999999999997 688999999886432    122335688999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccccc
Q 010676          409 LELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR  488 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~  488 (504)
                      |||+++++|..+   ..+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++............
T Consensus        78 ~e~~~~~~l~~~---~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~  154 (279)
T cd06619          78 TEFMDGGSLDVY---RKIPEHVLGRIAVAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYV  154 (279)
T ss_pred             EecCCCCChHHh---hcCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCC
Confidence            999999998654   34788889999999999999999999999999999999999999999999999866555455567


Q ss_pred             CCCcccccccccCC
Q 010676          489 GTAFWMAPEVCSNP  502 (504)
Q Consensus       489 GT~~YmAPEVL~g~  502 (504)
                      ||..|+|||++.++
T Consensus       155 ~~~~y~aPE~~~~~  168 (279)
T cd06619         155 GTNAYMAPERISGE  168 (279)
T ss_pred             CChhhcCceeecCC
Confidence            99999999998754


No 108
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=99.95  E-value=4.5e-27  Score=236.32  Aligned_cols=169  Identities=30%  Similarity=0.467  Sum_probs=142.5

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ++.|.+.+.||+|+||.||+|.+ .++..||+|.+........    ...+.+|+.+++.++|+||+++++++..++.+|
T Consensus         5 ~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~----~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~   80 (309)
T cd07872           5 METYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGA----PCTAIREVSLLKDLKHANIVTLHDIVHTDKSLT   80 (309)
T ss_pred             CCceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCc----chhHHHHHHHHHhCCCCCcceEEEEEeeCCeEE
Confidence            35799999999999999999998 4788999998865332211    234668999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          407 IFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      +||||+.+ +|.+++...  .++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++....... 
T Consensus        81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~  159 (309)
T cd07872          81 LVFEYLDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK  159 (309)
T ss_pred             EEEeCCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc
Confidence            99999986 777776543  37888999999999999999999999999999999999999999999999987543222 


Q ss_pred             -cccccCCCcccccccccC
Q 010676          484 -VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g  501 (504)
                       .....+|+.|+|||++.+
T Consensus       160 ~~~~~~~~~~y~aPE~~~~  178 (309)
T cd07872         160 TYSNEVVTLWYRPPDVLLG  178 (309)
T ss_pred             ccccccccccccCCHHHhC
Confidence             233468999999998864


No 109
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=99.95  E-value=8.9e-27  Score=231.87  Aligned_cols=170  Identities=26%  Similarity=0.414  Sum_probs=144.4

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |+..+.||+|+||+||+|.+ .+++.||+|.+.....  ........+.+|+.+++.++|+||+.+++++..++.+|++|
T Consensus         2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05632           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRI--KKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVL   79 (285)
T ss_pred             ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhh--hhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEE
Confidence            67889999999999999988 5789999998864321  11223345678999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-Ccc
Q 010676          410 ELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVK  485 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-~~~  485 (504)
                      ||+.+++|..++...   .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...... ...
T Consensus        80 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~  159 (285)
T cd05632          80 TIMNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIR  159 (285)
T ss_pred             EeccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCccc
Confidence            999999998877542   4899999999999999999999999999999999999999999999999998654322 223


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...|+..|+|||++.+.
T Consensus       160 ~~~g~~~~~aPE~~~~~  176 (285)
T cd05632         160 GRVGTVGYMAPEVLNNQ  176 (285)
T ss_pred             CCCCCcCccChHHhcCC
Confidence            45689999999998654


No 110
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as 
Probab=99.95  E-value=9.8e-27  Score=231.88  Aligned_cols=170  Identities=27%  Similarity=0.413  Sum_probs=144.5

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |++.+.||+|+||.||++.+ .+++.||+|.+......  .......+.+|+.+++.++|+||+.+++.+.+.+.+|+||
T Consensus         2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~--~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~   79 (285)
T cd05630           2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIK--KRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVL   79 (285)
T ss_pred             ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhcc--chHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEE
Confidence            67889999999999999998 57899999987643221  1222345678999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-cc
Q 010676          410 ELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VK  485 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~~  485 (504)
                      ||+.+++|.+++...   .+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++....... ..
T Consensus        80 e~~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~  159 (285)
T cd05630          80 TLMNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIK  159 (285)
T ss_pred             EecCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcccc
Confidence            999999999887542   48889999999999999999999999999999999999999999999999987543322 23


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...||..|||||++.++
T Consensus       160 ~~~g~~~y~aPE~~~~~  176 (285)
T cd05630         160 GRVGTVGYMAPEVVKNE  176 (285)
T ss_pred             CCCCCccccChHHHcCC
Confidence            44699999999998764


No 111
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=99.95  E-value=2.4e-27  Score=245.44  Aligned_cols=168  Identities=30%  Similarity=0.477  Sum_probs=141.5

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC-----
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES-----  403 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----  403 (504)
                      +|++++.||+|+||.||++.+ .++..||+|.+.....   ......++.+|+.+++.++|+||+++++++...+     
T Consensus         1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~   77 (372)
T cd07853           1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQ---NLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFE   77 (372)
T ss_pred             CCcccceeeeCCCEEEEEEEECCCCCEEEEEecccccc---chHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccc
Confidence            478899999999999999998 5889999998753211   1223456889999999999999999999998776     


Q ss_pred             eEEEEEEeccCCCHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~-~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .+|+||||+.+ +|..++. ...+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus        78 ~~~lv~e~~~~-~l~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~  156 (372)
T cd07853          78 EIYVVTELMQS-DLHKIIVSPQPLSSDHVKVFLYQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPD  156 (372)
T ss_pred             eEEEEeecccc-CHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccC
Confidence            79999999975 6776664 456899999999999999999999999999999999999999999999999998764332


Q ss_pred             C---cccccCCCcccccccccC
Q 010676          483 D---VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~---~~s~~GT~~YmAPEVL~g  501 (504)
                      .   .....+|+.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~y~aPE~~~~  178 (372)
T cd07853         157 ESKHMTQEVVTQYYRAPEILMG  178 (372)
T ss_pred             ccccCCCCCcCCCcCCHHHHcC
Confidence            2   233458999999999876


No 112
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=99.95  E-value=1.2e-26  Score=227.00  Aligned_cols=174  Identities=45%  Similarity=0.739  Sum_probs=146.7

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--CeE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--SKL  405 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--~~l  405 (504)
                      .+|++++.||+|+||.||++.+ .++..|++|.+...............+.+|+.+++.++|+||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (265)
T cd06652           2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL   81 (265)
T ss_pred             CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence            4789999999999999999998 5789999998864332222334457788999999999999999999988763  568


Q ss_pred             EEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc---
Q 010676          406 YIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL---  481 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~---  481 (504)
                      |++|||+++++|.+++... .+++..+..++.|++.+|.|||+++|+|+||||.|||++.++.++|+|||++.....   
T Consensus        82 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~  161 (265)
T cd06652          82 SIFMEHMPGGSIKDQLKSYGALTENVTRKYTRQILEGVSYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICL  161 (265)
T ss_pred             EEEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccc
Confidence            9999999999999988664 578889999999999999999999999999999999999999999999999875432   


Q ss_pred             --CCcccccCCCcccccccccCC
Q 010676          482 --NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 --~~~~s~~GT~~YmAPEVL~g~  502 (504)
                        .......||..|+|||++.+.
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~  184 (265)
T cd06652         162 SGTGMKSVTGTPYWMSPEVISGE  184 (265)
T ss_pred             cccccccCCCCccccChhhhcCC
Confidence              123344689999999998654


No 113
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=1.3e-28  Score=276.32  Aligned_cols=173  Identities=29%  Similarity=0.427  Sum_probs=151.0

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ..++|.++++||+|+||.|.+++. .+++.||+|++.+...-..  ....-|..|-.+|...+.+-|++++.+|++++++
T Consensus        73 ~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr--~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~~~L  150 (1317)
T KOG0612|consen   73 KAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKR--AETACFREERDIMVFGNSEWIVQLHYAFQDERYL  150 (1317)
T ss_pred             CHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhc--hhHHHHHHHhHHHHcCCcHHHHHHHHHhcCccce
Confidence            346899999999999999999998 6899999998865222111  1224577888999998999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          406 YIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      |+||||++||+|..++.++. +++.++++|+..|+.||.-||+.|+|||||||+|||||..|++||+|||.|-.+..++ 
T Consensus       151 YlVMdY~pGGDlltLlSk~~~~pE~~ArFY~aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~  230 (1317)
T KOG0612|consen  151 YLVMDYMPGGDLLTLLSKFDRLPEDWARFYTAEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGT  230 (1317)
T ss_pred             EEEEecccCchHHHHHhhcCCChHHHHHHHHHHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCc
Confidence            99999999999999999887 9999999999999999999999999999999999999999999999999987665443 


Q ss_pred             c--ccccCCCcccccccccC
Q 010676          484 V--KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ~--~s~~GT~~YmAPEVL~g  501 (504)
                      .  ...+|||.|.+||||..
T Consensus       231 V~s~~aVGTPDYISPEvLqs  250 (1317)
T KOG0612|consen  231 VRSSVAVGTPDYISPEVLQS  250 (1317)
T ss_pred             EEeccccCCCCccCHHHHHh
Confidence            2  34579999999999863


No 114
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=99.95  E-value=4.3e-27  Score=245.02  Aligned_cols=173  Identities=29%  Similarity=0.426  Sum_probs=142.7

Q ss_pred             ccccceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeee
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGT  398 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~  398 (504)
                      ...++|++++.||+|+||.||+|+.      .++..||+|++.....    ......+.+|+.+|..+ +||||++++++
T Consensus        32 ~~~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~il~~l~~HpnIv~l~~~  107 (375)
T cd05104          32 FPRNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAH----LTEREALMSELKVLSYLGNHINIVNLLGA  107 (375)
T ss_pred             cchHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcC----cHHHHHHHHHHHHHHHhcCCcceeeeeee
Confidence            3345799999999999999999973      3566899998753221    12235678999999999 79999999999


Q ss_pred             ecCCCeEEEEEEeccCCCHHHHHHhc------------------------------------------------------
Q 010676          399 DKDESKLYIFLELVTKGSLLNLYQRY------------------------------------------------------  424 (504)
Q Consensus       399 ~~~~~~lyLVmEy~~ggsL~~ll~~~------------------------------------------------------  424 (504)
                      +...+..|+||||+++|+|.+++...                                                      
T Consensus       108 ~~~~~~~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~  187 (375)
T cd05104         108 CTVGGPTLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRR  187 (375)
T ss_pred             eccCCcceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCccccccccccccc
Confidence            99999999999999999999888542                                                      


Q ss_pred             ----------------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          425 ----------------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       425 ----------------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                                            .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.....
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~  267 (375)
T cd05104         188 SVRSGSYIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRND  267 (375)
T ss_pred             ccccceecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCc
Confidence                                  2567788899999999999999999999999999999999999999999998765432


Q ss_pred             Cc----ccccCCCcccccccccCC
Q 010676          483 DV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      ..    ....++..|||||++.+.
T Consensus       268 ~~~~~~~~~~~~~~y~aPE~~~~~  291 (375)
T cd05104         268 SNYVVKGNARLPVKWMAPESIFNC  291 (375)
T ss_pred             ccccccCCCCCCcceeChhHhcCC
Confidence            21    122356679999998764


No 115
>PTZ00036 glycogen synthase kinase; Provisional
Probab=99.95  E-value=6e-27  Score=249.69  Aligned_cols=164  Identities=29%  Similarity=0.424  Sum_probs=134.5

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-----
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-----  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-----  401 (504)
                      ...|++++.||+|+||.||+|.+ .++..||||.+....         ....+|+.+|+.++|+||+++++++..     
T Consensus        65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~---------~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~  135 (440)
T PTZ00036         65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP---------QYKNRELLIMKNLNHINIIFLKDYYYTECFKK  135 (440)
T ss_pred             CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc---------chHHHHHHHHHhcCCCCCcceeeeEeeccccc
Confidence            35799999999999999999998 578899999874321         123479999999999999999887633     


Q ss_pred             ---CCeEEEEEEeccCCCHHHHHH-----hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-cEEEEe
Q 010676          402 ---ESKLYIFLELVTKGSLLNLYQ-----RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-SVKLAD  472 (504)
Q Consensus       402 ---~~~lyLVmEy~~ggsL~~ll~-----~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-~VKL~D  472 (504)
                         ...+|+||||+++ +|.+++.     ...+++..++.|+.||+.||.|||++||+||||||+||||+.++ .+||+|
T Consensus       136 ~~~~~~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~D  214 (440)
T PTZ00036        136 NEKNIFLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCD  214 (440)
T ss_pred             CCCceEEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeec
Confidence               2357899999986 5666553     23588899999999999999999999999999999999998665 799999


Q ss_pred             cCcccccccC-CcccccCCCcccccccccC
Q 010676          473 FGLAKATKLN-DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       473 FGLA~~~~~~-~~~s~~GT~~YmAPEVL~g  501 (504)
                      ||+++..... ......||+.|||||++.+
T Consensus       215 FGla~~~~~~~~~~~~~~t~~y~aPE~~~~  244 (440)
T PTZ00036        215 FGSAKNLLAGQRSVSYICSRFYRAPELMLG  244 (440)
T ss_pred             cccchhccCCCCcccCCCCcCccCHHHhcC
Confidence            9999865433 2344578999999999865


No 116
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.95  E-value=3e-27  Score=253.11  Aligned_cols=174  Identities=25%  Similarity=0.462  Sum_probs=155.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      .....|.+.+.||+|.|+.|.+|++ .++..||||++.......   ...+.+.+|+.+++.++|||||+++.+..+...
T Consensus        53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~---~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~  129 (596)
T KOG0586|consen   53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNP---SKRQKLGREVDIMKSLNHPNIVKLFSVIETEAT  129 (596)
T ss_pred             ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccCh---HHHHHHHHHHHHHHhcCCcceeeeeeeeeecce
Confidence            4467899999999999999999998 689999999887544332   334558899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          405 LYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +|+||||+.+|.+++++.+. .+.+..+..+|.|++++++|||+++|||||||.+||||+.+.++||+||||+..+..+.
T Consensus       130 lylV~eya~~ge~~~yl~~~gr~~e~~ar~~F~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~  209 (596)
T KOG0586|consen  130 LYLVMEYASGGELFDYLVKHGRMKEKEARAKFRQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGL  209 (596)
T ss_pred             eEEEEEeccCchhHHHHHhcccchhhhhhhhhHHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccc
Confidence            99999999999999988765 47888999999999999999999999999999999999999999999999998876554


Q ss_pred             -cccccCCCcccccccccCC
Q 010676          484 -VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g~  502 (504)
                       ..+.||++.|.|||+++|.
T Consensus       210 ~lqt~cgsppyAaPEl~~g~  229 (596)
T KOG0586|consen  210 MLQTFCGSPPYAAPELFNGK  229 (596)
T ss_pred             cccccCCCCCccChHhhcCc
Confidence             5778999999999999986


No 117
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=99.95  E-value=1.1e-26  Score=231.23  Aligned_cols=171  Identities=31%  Similarity=0.518  Sum_probs=148.2

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||++.+ .++..+|+|.+.....  ........+.+|+.++++++||||+++++++...+.+|+
T Consensus         1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   78 (290)
T cd05580           1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKI--VKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYL   78 (290)
T ss_pred             CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHh--hhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEE
Confidence            3689999999999999999998 5789999998864221  112334668899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS  486 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s  486 (504)
                      ||||+.+++|.+++... .+++..+..++.||+.||.|||++||+|+||+|.||||+.++.+||+|||++...... ...
T Consensus        79 v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~-~~~  157 (290)
T cd05580          79 VMEYVPGGELFSHLRKSGRFPEPVARFYAAQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR-TYT  157 (290)
T ss_pred             EEecCCCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-CCC
Confidence            99999999999988654 5899999999999999999999999999999999999999999999999998875544 334


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..|++.|+|||.+.++
T Consensus       158 ~~~~~~y~aPE~~~~~  173 (290)
T cd05580         158 LCGTPEYLAPEIILSK  173 (290)
T ss_pred             CCCCccccChhhhcCC
Confidence            5689999999988654


No 118
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=99.95  E-value=5e-27  Score=244.66  Aligned_cols=176  Identities=27%  Similarity=0.450  Sum_probs=143.8

Q ss_pred             cccccccceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEE
Q 010676          323 RFKRIITYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQY  395 (504)
Q Consensus       323 ~~~~~~~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l  395 (504)
                      .+....++|++++.||+|+||.||+|++      .++..||+|.+.....    ......+.+|+.+++.+ +|+|||++
T Consensus        32 ~~~~~~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~il~~l~~h~nIv~~  107 (374)
T cd05106          32 KWEFPRDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAH----TDEREALMSELKILSHLGQHKNIVNL  107 (374)
T ss_pred             cccccHHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCC----HHHHHHHHHHHHHHHhhccCCceeeE
Confidence            3344456899999999999999999885      2345799998864322    12245688999999999 89999999


Q ss_pred             eeeecCCCeEEEEEEeccCCCHHHHHHhc---------------------------------------------------
Q 010676          396 YGTDKDESKLYIFLELVTKGSLLNLYQRY---------------------------------------------------  424 (504)
Q Consensus       396 ~~~~~~~~~lyLVmEy~~ggsL~~ll~~~---------------------------------------------------  424 (504)
                      ++++...+.+|+||||+.+|+|.+++...                                                   
T Consensus       108 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (374)
T cd05106         108 LGACTHGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPV  187 (374)
T ss_pred             eeEecCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCc
Confidence            99999999999999999999999887532                                                   


Q ss_pred             --------------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          425 --------------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       425 --------------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                                          .+++..+..|+.||+.||.|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~  267 (374)
T cd05106         188 SSSSSQSSDSKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLASKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSN  267 (374)
T ss_pred             cccccccccccchhccCCCCCcCHHHHHHHHHHHHHHHHHHHHCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcc
Confidence                                256778899999999999999999999999999999999999999999999876543221


Q ss_pred             ----ccccCCCcccccccccCC
Q 010676          485 ----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ----~s~~GT~~YmAPEVL~g~  502 (504)
                          ....++..|||||++.+.
T Consensus       268 ~~~~~~~~~~~~y~aPE~~~~~  289 (374)
T cd05106         268 YVVKGNARLPVKWMAPESIFDC  289 (374)
T ss_pred             eeeccCCCCccceeCHHHhcCC
Confidence                122356679999988654


No 119
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=99.95  E-value=8.8e-27  Score=230.18  Aligned_cols=169  Identities=34%  Similarity=0.525  Sum_probs=135.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhh---CCCCceeEEeeeecC----
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR---FEHENIVQYYGTDKD----  401 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~---L~HpnIV~l~~~~~~----  401 (504)
                      +|++.+.||+|+||.||+|.+ .++..||+|.+..........   ..+.+|+.+++.   ++||||+++++++..    
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~---~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~   77 (288)
T cd07863           1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLP---LSTVREVALLKRLEAFDHPNIVRLMDVCATSRTD   77 (288)
T ss_pred             CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCc---hHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCC
Confidence            488999999999999999998 578999999886532221111   223456655554   479999999998754    


Q ss_pred             -CCeEEEEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          402 -ESKLYIFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       402 -~~~lyLVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                       ...++++|||+.+ +|..++...   .+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.
T Consensus        78 ~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~  156 (288)
T cd07863          78 RETKVTLVFEHVDQ-DLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLAR  156 (288)
T ss_pred             CCceEEEEEccccc-CHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccc
Confidence             3458999999985 788877653   48899999999999999999999999999999999999999999999999987


Q ss_pred             ccccCC-cccccCCCcccccccccCC
Q 010676          478 ATKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       478 ~~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ...... .....||..|+|||++.+.
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (288)
T cd07863         157 IYSCQMALTPVVVTLWYRAPEVLLQS  182 (288)
T ss_pred             cccCcccCCCccccccccCchHhhCC
Confidence            654332 2345689999999998654


No 120
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=99.95  E-value=6.8e-27  Score=229.80  Aligned_cols=170  Identities=22%  Similarity=0.365  Sum_probs=142.7

Q ss_pred             cceeeeeeecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ..|++.+.||+|+||.||+|++    ..+..||+|.+.....    ......+.+|+.++.+++||||+++++++...+.
T Consensus         5 ~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~   80 (266)
T cd05064           5 KSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCS----DKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNT   80 (266)
T ss_pred             HHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCC----HHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCC
Confidence            4689999999999999999975    3466899998764321    2223568899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +|+||||+++++|.+++...  .+++..+..++.||+.||.|||++|++||||||+|||++.++.++|+|||++......
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~  160 (266)
T cd05064          81 MMIVTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSE  160 (266)
T ss_pred             cEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCccccccccc
Confidence            99999999999999988753  5889999999999999999999999999999999999999999999999987653322


Q ss_pred             Cc---ccccCCCcccccccccCC
Q 010676          483 DV---KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~---~s~~GT~~YmAPEVL~g~  502 (504)
                      ..   ....++..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~  183 (266)
T cd05064         161 AIYTTMSGKSPVLWAAPEAIQYH  183 (266)
T ss_pred             chhcccCCCCceeecCHHHHhhC
Confidence            11   122356789999988654


No 121
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=99.95  E-value=8.9e-27  Score=230.94  Aligned_cols=164  Identities=29%  Similarity=0.401  Sum_probs=137.7

Q ss_pred             ecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||+|+||.||++.. .+|..||+|.+.......  ......+..|+.+++.++||||+++++++..+..+|+||||+.++
T Consensus         1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~--~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~   78 (277)
T cd05607           1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKK--KSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGG   78 (277)
T ss_pred             CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhc--chhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCC
Confidence            79999999999987 579999999886422211  112234557999999999999999999999999999999999999


Q ss_pred             CHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-cccccCCC
Q 010676          416 SLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGTA  491 (504)
Q Consensus       416 sL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~~s~~GT~  491 (504)
                      +|..++...   .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....... .....||.
T Consensus        79 ~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~  158 (277)
T cd05607          79 DLKYHIYNVGERGLEMERVIHYSAQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAGTN  158 (277)
T ss_pred             CHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCCCC
Confidence            998877543   47888889999999999999999999999999999999999999999999987654332 23456899


Q ss_pred             cccccccccCC
Q 010676          492 FWMAPEVCSNP  502 (504)
Q Consensus       492 ~YmAPEVL~g~  502 (504)
                      .|+|||++.++
T Consensus       159 ~y~aPE~~~~~  169 (277)
T cd05607         159 GYMAPEILKEE  169 (277)
T ss_pred             CccCHHHHccC
Confidence            99999998764


No 122
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=99.95  E-value=1.6e-27  Score=254.66  Aligned_cols=171  Identities=29%  Similarity=0.493  Sum_probs=146.4

Q ss_pred             ccccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      +....+++.++..||+|.||+||+|.+..  .||||++.......   +.++.|++|+.+|++-+|.||+-+.||+....
T Consensus       387 WeIp~~ev~l~~rIGsGsFGtV~Rg~whG--dVAVK~Lnv~~pt~---~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~  461 (678)
T KOG0193|consen  387 WEIPPEEVLLGERIGSGSFGTVYRGRWHG--DVAVKLLNVDDPTP---EQLQAFKNEVAVLKKTRHENILLFMGACMNPP  461 (678)
T ss_pred             cccCHHHhhccceeccccccceeeccccc--ceEEEEEecCCCCH---HHHHHHHHHHHHHhhcchhhheeeehhhcCCc
Confidence            33445567789999999999999999843  69999987655443   36788999999999999999999999998877


Q ss_pred             eEEEEEEeccCCCHHHHHH--hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc-
Q 010676          404 KLYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK-  480 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~--~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~-  480 (504)
                      . .||+.+|+|.+|+.++.  +.+|...+...|++||++|+.|||.++|||||||..||||+++++|||+||||+.... 
T Consensus       462 ~-AIiTqwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~  540 (678)
T KOG0193|consen  462 L-AIITQWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTR  540 (678)
T ss_pred             e-eeeehhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeee
Confidence            6 99999999999999875  4568888999999999999999999999999999999999999999999999986422 


Q ss_pred             ---cCCcccccCCCccccccccc
Q 010676          481 ---LNDVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       481 ---~~~~~s~~GT~~YmAPEVL~  500 (504)
                         ........|...||||||+.
T Consensus       541 w~g~~q~~qp~gsilwmAPEvIR  563 (678)
T KOG0193|consen  541 WSGEQQLEQPHGSLLWMAPEVIR  563 (678)
T ss_pred             eccccccCCCccchhhhcHHHHh
Confidence               22344556889999999986


No 123
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=99.95  E-value=9.7e-27  Score=252.08  Aligned_cols=173  Identities=27%  Similarity=0.403  Sum_probs=145.4

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC--
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES--  403 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~--  403 (504)
                      ..++|++.+.||+|+||+||+|.+ .++..||||.+......   ......+.+|+.++..++|+||++++..+...+  
T Consensus        30 ~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~---~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~  106 (496)
T PTZ00283         30 QAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMS---EADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPR  106 (496)
T ss_pred             cCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCC---HHHHHHHHHHHHHHhcCCCCcEEEeecceeccccc
Confidence            346899999999999999999987 68999999988653322   233456789999999999999999987764332  


Q ss_pred             ------eEEEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          404 ------KLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       404 ------~lyLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                            .+++||||+.+|+|.+++..     ..+++..+..++.|++.||.|||+++|+||||||+||||+.++.+||+|
T Consensus       107 ~~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~D  186 (496)
T PTZ00283        107 NPENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGD  186 (496)
T ss_pred             CcccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEe
Confidence                  37899999999999998864     2488899999999999999999999999999999999999999999999


Q ss_pred             cCcccccccC----CcccccCCCcccccccccCC
Q 010676          473 FGLAKATKLN----DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       473 FGLA~~~~~~----~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||+++.....    .....+||+.|||||++.++
T Consensus       187 FGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~  220 (496)
T PTZ00283        187 FGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRK  220 (496)
T ss_pred             cccCeeccccccccccccccCCcceeCHHHhCCC
Confidence            9998764322    22345799999999999765


No 124
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=99.95  E-value=9.6e-27  Score=224.76  Aligned_cols=173  Identities=61%  Similarity=0.999  Sum_probs=150.9

Q ss_pred             ceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|+..+.||+|+||.||+|.+. ++..|++|.+...............+.+|+.+++.++|+||+++++++.....+|++
T Consensus         1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (258)
T cd06632           1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF   80 (258)
T ss_pred             CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence            4778899999999999999985 899999999876544444455567889999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-ccc
Q 010676          409 LELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~~s  486 (504)
                      |||+++++|.+++.... +++..+..++.||+.||.|||+.||+|+||+|+||+++.++.+||+|||++....... ...
T Consensus        81 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~  160 (258)
T cd06632          81 LELVPGGSLAKLLKKYGSFPEPVIRLYTRQILLGLEYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKS  160 (258)
T ss_pred             EEecCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccc
Confidence            99999999999987655 8899999999999999999999999999999999999999999999999987654332 344


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..|+..|+|||.+.++
T Consensus       161 ~~~~~~y~~pe~~~~~  176 (258)
T cd06632         161 FKGSPYWMAPEVIAQQ  176 (258)
T ss_pred             cCCCcceeCHHHhcCC
Confidence            5689999999987653


No 125
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=99.95  E-value=1.2e-26  Score=233.78  Aligned_cols=170  Identities=28%  Similarity=0.435  Sum_probs=147.5

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||++.+ .++..+++|.+.....    .....++.+|+.++..++||||+++++++..++.+|+
T Consensus         1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l   76 (308)
T cd06615           1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIK----PAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISI   76 (308)
T ss_pred             CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccC----HHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEE
Confidence            3689999999999999999987 5788899998754221    2234567889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      ||||+++++|.+++... .+++..+..++.|++.||.|||+ .+|+|+||||+|||++.++.++|+|||++.........
T Consensus        77 v~ey~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  156 (308)
T cd06615          77 CMEHMDGGSLDQVLKKAGRIPENILGKISIAVLRGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMAN  156 (308)
T ss_pred             EeeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccc
Confidence            99999999999998654 58899999999999999999997 69999999999999999999999999998765544445


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...|+..|+|||++.+.
T Consensus       157 ~~~~~~~~~aPE~~~~~  173 (308)
T cd06615         157 SFVGTRSYMSPERLQGT  173 (308)
T ss_pred             cCCCCcCccChhHhcCC
Confidence            56789999999998764


No 126
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=99.95  E-value=4.8e-27  Score=241.16  Aligned_cols=172  Identities=26%  Similarity=0.393  Sum_probs=142.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--  402 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--  402 (504)
                      .+.++|++.+.||+|+||.||++.+ .++..||+|.+.....   .......+.+|+.+++.++||||+++++++...  
T Consensus        14 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~   90 (355)
T cd07874          14 TVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKS   90 (355)
T ss_pred             hhhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCccc---ChHHHHHHHHHHHHHHHhCCCchhceeeeeecccc
Confidence            4567999999999999999999998 5788999998754322   122345677899999999999999999987543  


Q ss_pred             ----CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          403 ----SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       403 ----~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                          ..+|+||||+.+ +|...+.. .+++..+..++.||+.||.|||++||+||||||+||||+.++.+||+|||+++.
T Consensus        91 ~~~~~~~~lv~e~~~~-~l~~~~~~-~l~~~~~~~~~~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~  168 (355)
T cd07874          91 LEEFQDVYLVMELMDA-NLCQVIQM-ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  168 (355)
T ss_pred             ccccceeEEEhhhhcc-cHHHHHhh-cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCccccc
Confidence                357999999986 56665543 588889999999999999999999999999999999999999999999999976


Q ss_pred             cccCC-cccccCCCcccccccccCC
Q 010676          479 TKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       479 ~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..... .....||+.|+|||++.+.
T Consensus       169 ~~~~~~~~~~~~t~~y~aPE~~~~~  193 (355)
T cd07874         169 AGTSFMMTPYVVTRYYRAPEVILGM  193 (355)
T ss_pred             CCCccccCCccccCCccCHHHHcCC
Confidence            54332 3345699999999998764


No 127
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.95  E-value=3e-28  Score=258.70  Aligned_cols=166  Identities=34%  Similarity=0.568  Sum_probs=144.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|.-++.||.|+||.||.|.+ .+...||||.+...  +.+....-+.+..|+..|++++|||++.|.++|..+...|||
T Consensus        27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsyS--GKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLV  104 (948)
T KOG0577|consen   27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYS--GKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLV  104 (948)
T ss_pred             HHHHHHHhcCCccceeEEeeccCccceeeeeecccc--ccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHH
Confidence            466678899999999999998 68899999987543  334445567788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHH--HhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccc
Q 010676          409 LELVTKGSLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll--~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s  486 (504)
                      ||||-| +-.+++  .+.++.+.++..|+.+.+.||.|||+++.||||||..|||++..|.|||+|||.|.....  ..+
T Consensus       105 MEYClG-SAsDlleVhkKplqEvEIAAi~~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~P--Ans  181 (948)
T KOG0577|consen  105 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAP--ANS  181 (948)
T ss_pred             HHHHhc-cHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCc--hhc
Confidence            999976 666666  356799999999999999999999999999999999999999999999999999865433  356


Q ss_pred             ccCCCccccccccc
Q 010676          487 CRGTAFWMAPEVCS  500 (504)
Q Consensus       487 ~~GT~~YmAPEVL~  500 (504)
                      ++|||+||||||+.
T Consensus       182 FvGTPywMAPEVIL  195 (948)
T KOG0577|consen  182 FVGTPYWMAPEVIL  195 (948)
T ss_pred             ccCCccccchhHhe
Confidence            78999999999985


No 128
>PHA03209 serine/threonine kinase US3; Provisional
Probab=99.95  E-value=5.2e-27  Score=242.42  Aligned_cols=162  Identities=25%  Similarity=0.276  Sum_probs=138.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ..|++++.||+|+||.||+|.+ .++..||+|+...           .....|+.+++.++|+||+++++++......|+
T Consensus        66 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~-----------~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l  134 (357)
T PHA03209         66 LGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQK-----------GTTLIEAMLLQNVNHPSVIRMKDTLVSGAITCM  134 (357)
T ss_pred             cCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCc-----------cccHHHHHHHHhCCCCCCcChhheEEeCCeeEE
Confidence            3699999999999999999998 4678899996431           112468999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-Cc
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-~~  484 (504)
                      ||||+.+ +|.+++..  ..+++..+..|+.||+.||.|||++|||||||||+|||++.++.+||+|||+++..... ..
T Consensus       135 v~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~  213 (357)
T PHA03209        135 VLPHYSS-DLYTYLTKRSRPLPIDQALIIEKQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAF  213 (357)
T ss_pred             EEEccCC-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCccc
Confidence            9999965 77777654  35889999999999999999999999999999999999999999999999998753322 23


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....||+.|+|||++.+.
T Consensus       214 ~~~~gt~~y~aPE~~~~~  231 (357)
T PHA03209        214 LGLAGTVETNAPEVLARD  231 (357)
T ss_pred             ccccccccccCCeecCCC
Confidence            345699999999998764


No 129
>PHA03207 serine/threonine kinase US3; Provisional
Probab=99.94  E-value=1.6e-26  Score=241.83  Aligned_cols=165  Identities=24%  Similarity=0.288  Sum_probs=139.9

Q ss_pred             cccceeeeeeecccCceeEEEEEc---cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS---DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~---~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      +..+|.+++.||+|+||.||++..   ..+..|++|.+...          ..+.+|+.+|+.++||||+++++++....
T Consensus        90 ~~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~----------~~~~~E~~il~~l~h~~iv~~~~~~~~~~  159 (392)
T PHA03207         90 VRMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG----------KTPGREIDILKTISHRAIINLIHAYRWKS  159 (392)
T ss_pred             ccCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc----------ccHHHHHHHHHhcCCCCccceeeeEeeCC
Confidence            345799999999999999999975   34678899876421          12458999999999999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .+|+|||++.+ +|..++.. ..+++..+..|+.||+.||.|||++||+||||||+||||+.++.++|+|||++......
T Consensus       160 ~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~ql~~aL~~LH~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~  238 (392)
T PHA03207        160 TVCMVMPKYKC-DLFTYVDRSGPLPLEQAITIQRRLLEALAYLHGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAH  238 (392)
T ss_pred             EEEEEehhcCC-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEccCccccccCcc
Confidence            99999999974 77777654 45899999999999999999999999999999999999999999999999998754432


Q ss_pred             C----cccccCCCcccccccccCC
Q 010676          483 D----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      .    .....||+.|+|||++.+.
T Consensus       239 ~~~~~~~~~~gt~~y~aPE~~~~~  262 (392)
T PHA03207        239 PDTPQCYGWSGTLETNSPELLALD  262 (392)
T ss_pred             cccccccccccccCccCHhHhcCC
Confidence            2    2235699999999998754


No 130
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=99.94  E-value=1.2e-26  Score=239.16  Aligned_cols=172  Identities=27%  Similarity=0.392  Sum_probs=142.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--  402 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--  402 (504)
                      .+.++|++.+.||+|+||.||++.+ .++..||||++.....   .......+.+|+.+++.++||||+++++++...  
T Consensus        21 ~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~   97 (364)
T cd07875          21 TVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQ---NQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKS   97 (364)
T ss_pred             chhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCcccc---CchhHHHHHHHHHHHHhcCCCCccccceeeccccc
Confidence            4567899999999999999999998 5788999998864221   122335677899999999999999999887543  


Q ss_pred             ----CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          403 ----SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       403 ----~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                          ..+|+||||+.+ +|..++. ..++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        98 ~~~~~~~~lv~e~~~~-~l~~~~~-~~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~  175 (364)
T cd07875          98 LEEFQDVYIVMELMDA-NLCQVIQ-MELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  175 (364)
T ss_pred             ccccCeEEEEEeCCCC-CHHHHHH-hcCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccc
Confidence                357999999976 6666664 3588889999999999999999999999999999999999999999999999976


Q ss_pred             cccCC-cccccCCCcccccccccCC
Q 010676          479 TKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       479 ~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..... .....||+.|+|||++.+.
T Consensus       176 ~~~~~~~~~~~~t~~y~aPE~~~~~  200 (364)
T cd07875         176 AGTSFMMTPYVVTRYYRAPEVILGM  200 (364)
T ss_pred             cCCCCcccCCcccCCcCCHHHHhCC
Confidence            54332 2345689999999998764


No 131
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=99.94  E-value=1.4e-26  Score=244.41  Aligned_cols=177  Identities=28%  Similarity=0.434  Sum_probs=145.2

Q ss_pred             ccccccccceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeE
Q 010676          322 GRFKRIITYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQ  394 (504)
Q Consensus       322 ~~~~~~~~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~  394 (504)
                      +++....+.|+++++||+|+||.||+|++.      .+..||||.+.....    ....+.+.+|+.+|..+. ||||++
T Consensus        30 ~~~~~~~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~Ei~~l~~l~~HpnIv~  105 (400)
T cd05105          30 SRWEFPRDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTAR----SSEKQALMSELKIMTHLGPHLNIVN  105 (400)
T ss_pred             CceeccccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCC----hHHHHHHHHHHHHHHhcCCCCCeee
Confidence            455555678999999999999999999862      235799998754221    223457889999999996 999999


Q ss_pred             EeeeecCCCeEEEEEEeccCCCHHHHHHhc--------------------------------------------------
Q 010676          395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY--------------------------------------------------  424 (504)
Q Consensus       395 l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~--------------------------------------------------  424 (504)
                      +++++.....+||||||+++|+|.+++...                                                  
T Consensus       106 l~~~~~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  185 (400)
T cd05105         106 LLGACTKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADT  185 (400)
T ss_pred             EEEEEccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccc
Confidence            999999999999999999999999887542                                                  


Q ss_pred             -----------------------------------------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 010676          425 -----------------------------------------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKC  457 (504)
Q Consensus       425 -----------------------------------------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP  457 (504)
                                                                     .+++..+..++.||+.||.|||+++|+||||||
T Consensus       186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivH~dikp  265 (400)
T cd05105         186 TQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLASKNCVHRDLAA  265 (400)
T ss_pred             cccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCh
Confidence                                                           256677889999999999999999999999999


Q ss_pred             CcEEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          458 ANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       458 ~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +|||++.++.+||+|||+++......    .....++..|||||++.+.
T Consensus       266 ~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  314 (400)
T cd05105         266 RNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDN  314 (400)
T ss_pred             HhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCC
Confidence            99999999999999999987643322    1223467889999998764


No 132
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.94  E-value=7.2e-27  Score=230.96  Aligned_cols=170  Identities=32%  Similarity=0.509  Sum_probs=147.7

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++++.||+|+||.||++.+ .++..||+|.+....    .......+.+|+.++++++|+||+++++++...+.+|+
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~l   76 (286)
T cd06622           1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLEL----DESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYM   76 (286)
T ss_pred             ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeeccc----CHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEE
Confidence            3688999999999999999998 488999999876421    12234568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc----CCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          408 FLELVTKGSLLNLYQRY----HLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~----~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      ||||+++++|..++...    .+++..+..++.||+.||.|||+ .+|+|+||||+|||++.++.++|+|||++......
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~  156 (286)
T cd06622          77 CMEYMDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVAS  156 (286)
T ss_pred             EEeecCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCC
Confidence            99999999999988764    68999999999999999999997 59999999999999999999999999998765544


Q ss_pred             CcccccCCCcccccccccCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ......+++.|+|||++.+.
T Consensus       157 ~~~~~~~~~~y~aPE~~~~~  176 (286)
T cd06622         157 LAKTNIGCQSYMAPERIKSG  176 (286)
T ss_pred             ccccCCCccCccCcchhcCC
Confidence            44555689999999998643


No 133
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis.  Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=99.94  E-value=1.4e-26  Score=225.88  Aligned_cols=172  Identities=30%  Similarity=0.480  Sum_probs=146.7

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|++ .++..||+|.+.......  ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus         2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~--~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08228           2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMD--AKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNI   79 (267)
T ss_pred             cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCC--HHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEE
Confidence            5799999999999999999998 588999999876433222  2334567889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          408 FLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      ||||+++++|.+++..     ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~  159 (267)
T cd08228          80 VLELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             EEEecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccch
Confidence            9999999999987742     23788899999999999999999999999999999999999999999999998765432


Q ss_pred             C--cccccCCCcccccccccCC
Q 010676          483 D--VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~--~~s~~GT~~YmAPEVL~g~  502 (504)
                      .  .....|++.|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~~  181 (267)
T cd08228         160 TTAAHSLVGTPYYMSPERIHEN  181 (267)
T ss_pred             hHHHhcCCCCccccChhhhccC
Confidence            2  2234688999999988653


No 134
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=99.94  E-value=2.1e-26  Score=224.84  Aligned_cols=173  Identities=43%  Similarity=0.749  Sum_probs=148.2

Q ss_pred             ceeeeeeecccCceeEEEEEccCCceEEEEEEeccccc-hhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQG-SQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~-~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++++.||+|+||.||+|...++..+|+|.+...... .........+.+|+.+|+.++|+||+++++++...+.+|++
T Consensus         1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   80 (265)
T cd06631           1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF   80 (265)
T ss_pred             CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence            48889999999999999999888999999988653322 22233456788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc------
Q 010676          409 LELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL------  481 (504)
Q Consensus       409 mEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~------  481 (504)
                      |||+++++|.+++.+ ..+++..+..++.|++.||.|||+.+|+|+||+|+||+++.++.++|+|||++.....      
T Consensus        81 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~  160 (265)
T cd06631          81 MEFVPGGSISSILNRFGPLPEPVFCKYTKQILDGVAYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGT  160 (265)
T ss_pred             EecCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhcccccc
Confidence            999999999998876 4588999999999999999999999999999999999999999999999999875321      


Q ss_pred             --CCcccccCCCcccccccccCC
Q 010676          482 --NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 --~~~~s~~GT~~YmAPEVL~g~  502 (504)
                        .......|+..|+|||++.+.
T Consensus       161 ~~~~~~~~~~~~~~~~pe~~~~~  183 (265)
T cd06631         161 HSNMLKSMHGTPYWMAPEVINES  183 (265)
T ss_pred             ccccccccCCCccccChhhhcCC
Confidence              112234589999999998754


No 135
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=99.94  E-value=1.8e-26  Score=225.21  Aligned_cols=169  Identities=32%  Similarity=0.460  Sum_probs=144.7

Q ss_pred             ccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .++|++.+.||+|+||.||+|.+.++..||+|.+.....      ....+.+|+.++++++|+||+++++++...+.+|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05068           5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGTM------DPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYI   78 (261)
T ss_pred             hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCcc------cHHHHHHHHHHHHHCCCCCccceeEEEecCCCeee
Confidence            357999999999999999999987788899998764321      13457889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          408 FLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      +|||+.+++|.+++...   .+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++........
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05068          79 VTELMKYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY  158 (261)
T ss_pred             eeecccCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc
Confidence            99999999999998654   488999999999999999999999999999999999999999999999999886653332


Q ss_pred             ccccC---CCcccccccccCC
Q 010676          485 KSCRG---TAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~G---T~~YmAPEVL~g~  502 (504)
                      ....|   +..|+|||++.+.
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~  179 (261)
T cd05068         159 EAREGAKFPIKWTAPEAALYN  179 (261)
T ss_pred             cccCCCcCceeccCccccccC
Confidence            22223   4579999988653


No 136
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=1.3e-26  Score=226.53  Aligned_cols=168  Identities=39%  Similarity=0.612  Sum_probs=145.1

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .++|++.+.||+|+||.||+|.+ .++..||+|++.....     .....+.+|+.++..++||||+++++++.....+|
T Consensus         8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~   82 (267)
T cd06646           8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPG-----DDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLW   82 (267)
T ss_pred             hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCcc-----chHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEE
Confidence            35799999999999999999997 6788999998864321     12345778999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          407 IFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      +||||+++++|.+++.. ..+++..+..++.|++.||.|||++||+|+||||.||+++.++.++|+|||++.......  
T Consensus        83 iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~  162 (267)
T cd06646          83 ICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAK  162 (267)
T ss_pred             EEEeCCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccc
Confidence            99999999999998864 458999999999999999999999999999999999999999999999999987654222  


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....|++.|+|||++.
T Consensus       163 ~~~~~~~~~y~~PE~~~  179 (267)
T cd06646         163 RKSFIGTPYWMAPEVAA  179 (267)
T ss_pred             cCccccCccccCHhHcc
Confidence            23446899999999874


No 137
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=99.94  E-value=3.4e-26  Score=221.10  Aligned_cols=170  Identities=32%  Similarity=0.571  Sum_probs=147.1

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|.+.+.||+|+||.||+|.+ .++..|++|.+......   ......+.+|+.+++.++||||+++++++...+.+|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08529           1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMN---RREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIV   77 (256)
T ss_pred             CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCC---HHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEE
Confidence            478889999999999999998 57899999988643322   23346788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          409 LELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |||+.+++|.+++...   .+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++......  
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~  157 (256)
T cd08529          78 MEYAENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNF  157 (256)
T ss_pred             EEeCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccch
Confidence            9999999999988663   48888999999999999999999999999999999999999999999999987654332  


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....|++.|+|||++.++
T Consensus       158 ~~~~~~~~~y~aPE~~~~~  176 (256)
T cd08529         158 ANTIVGTPYYLSPELCEDK  176 (256)
T ss_pred             hhccccCccccCHHHhcCC
Confidence            2334689999999998765


No 138
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=99.94  E-value=1.9e-26  Score=224.42  Aligned_cols=168  Identities=26%  Similarity=0.433  Sum_probs=142.9

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      ++|++.+.||+|+||.||++...++..+|+|.+.....      ....+.+|+.+|+.++||||+++++++...+.+|+|
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv   77 (256)
T cd05114           4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGAM------SEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIV   77 (256)
T ss_pred             HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCCc------cHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEE
Confidence            46889999999999999999988888899997653221      124578899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc--
Q 010676          409 LELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV--  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~--  484 (504)
                      |||+++++|.+++..  ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||+++.......  
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05114          78 TEFMENGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTS  157 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceec
Confidence            999999999998864  3488899999999999999999999999999999999999999999999999875433222  


Q ss_pred             -ccccCCCcccccccccCC
Q 010676          485 -KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 -~s~~GT~~YmAPEVL~g~  502 (504)
                       ....++..|+|||++.++
T Consensus       158 ~~~~~~~~~y~aPE~~~~~  176 (256)
T cd05114         158 SSGAKFPVKWSPPEVFNFS  176 (256)
T ss_pred             cCCCCCchhhCChhhcccC
Confidence             122356689999998753


No 139
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=99.94  E-value=2.4e-26  Score=223.95  Aligned_cols=169  Identities=28%  Similarity=0.473  Sum_probs=144.9

Q ss_pred             ccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .++|++.+.||+|+||.||+|...++..|++|.+....      .....+.+|+.+++.++|+||+++++++...+.+|+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~------~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (261)
T cd05072           5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT------MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYI   78 (261)
T ss_pred             hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc------hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEE
Confidence            45899999999999999999998888889999765321      123568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          408 FLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      +|||+.+++|.+++..   ..++...+..++.|++.||.|||+++++|+||||+||+++.++.++|+|||++........
T Consensus        79 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~  158 (261)
T cd05072          79 ITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEY  158 (261)
T ss_pred             EEecCCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCce
Confidence            9999999999998864   3478888999999999999999999999999999999999999999999999976543321


Q ss_pred             ---ccccCCCcccccccccCC
Q 010676          485 ---KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ---~s~~GT~~YmAPEVL~g~  502 (504)
                         ....++..|+|||++.++
T Consensus       159 ~~~~~~~~~~~y~aPE~~~~~  179 (261)
T cd05072         159 TAREGAKFPIKWTAPEAINFG  179 (261)
T ss_pred             eccCCCccceecCCHHHhccC
Confidence               223356789999998754


No 140
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=99.94  E-value=2.1e-26  Score=224.41  Aligned_cols=168  Identities=26%  Similarity=0.387  Sum_probs=142.2

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .+|++.+.||+|+||.||++.+.++..+|+|.+......      ...+.+|+.+++.++|+||+++++++...+.+|+|
T Consensus         4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05059           4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAMS------EDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIV   77 (256)
T ss_pred             HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCCC------HHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEE
Confidence            368899999999999999999877788999987532211      23567899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccc
Q 010676          409 LELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s  486 (504)
                      |||+++++|.+++...  .+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||+++.........
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~  157 (256)
T cd05059          78 TEYMANGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTS  157 (256)
T ss_pred             EecCCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccc
Confidence            9999999999988653  47889999999999999999999999999999999999999999999999987654332222


Q ss_pred             cc---CCCcccccccccCC
Q 010676          487 CR---GTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~---GT~~YmAPEVL~g~  502 (504)
                      ..   ++..|+|||++.+.
T Consensus       158 ~~~~~~~~~y~~Pe~~~~~  176 (256)
T cd05059         158 SQGTKFPVKWAPPEVFDYS  176 (256)
T ss_pred             cCCCCCCccccCHHHhccC
Confidence            22   34579999998754


No 141
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.94  E-value=2.6e-26  Score=226.99  Aligned_cols=170  Identities=26%  Similarity=0.414  Sum_probs=142.7

Q ss_pred             cceeeeeeecccCceeEEEEEc-----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      ..|++.+.||+|+||.||+|..     .++..+++|.+....    .......+.+|+.+++.++||||+++++++...+
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~   80 (283)
T cd05090           5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDIN----NPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQ   80 (283)
T ss_pred             hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCC----CHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCC
Confidence            5789999999999999999984     356789999875322    1233467889999999999999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHh------------------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC
Q 010676          404 KLYIFLELVTKGSLLNLYQR------------------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN  465 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~------------------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~  465 (504)
                      ..|+||||+.+++|.+++..                  ..+++..+..++.||+.||.|||++||+|+||||+|||++.+
T Consensus        81 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~nili~~~  160 (283)
T cd05090          81 PVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLSSHFFVHKDLAARNILIGEQ  160 (283)
T ss_pred             ceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHhcCeehhccccceEEEcCC
Confidence            99999999999999998842                  236778889999999999999999999999999999999999


Q ss_pred             CcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          466 GSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       466 g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +.+||+|||+++......    .....++..|+|||++.++
T Consensus       161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  201 (283)
T cd05090         161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYG  201 (283)
T ss_pred             CcEEeccccccccccCCcceecccCCCccceecChHHhccC
Confidence            999999999987653322    2233467789999998654


No 142
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated 
Probab=99.94  E-value=1.3e-26  Score=226.61  Aligned_cols=167  Identities=38%  Similarity=0.654  Sum_probs=144.8

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|.+ .++..||+|.+.....     .....+.+|+.+++.++||||+++++.+...+.+|+
T Consensus         9 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~l   83 (267)
T cd06645           9 EDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPG-----EDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWI   83 (267)
T ss_pred             HHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCch-----hHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEE
Confidence            4789999999999999999987 5789999998864321     223457789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Cc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~  484 (504)
                      ||||+++++|.+++... .+++.++..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++......  ..
T Consensus        84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~  163 (267)
T cd06645          84 CMEFCGGGSLQDIYHVTGPLSESQIAYVSRETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKR  163 (267)
T ss_pred             EEeccCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCccccc
Confidence            99999999999988654 5899999999999999999999999999999999999999999999999998654322  12


Q ss_pred             ccccCCCccccccccc
Q 010676          485 KSCRGTAFWMAPEVCS  500 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~  500 (504)
                      ....||..|+|||++.
T Consensus       164 ~~~~~~~~y~aPE~~~  179 (267)
T cd06645         164 KSFIGTPYWMAPEVAA  179 (267)
T ss_pred             ccccCcccccChhhhc
Confidence            3446899999999873


No 143
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=99.94  E-value=2.8e-26  Score=225.93  Aligned_cols=168  Identities=33%  Similarity=0.512  Sum_probs=141.7

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|.+.+.||+|+||.||+|.+ .++..||+|.+.......   .....+.+|+.+++.++||||+++++++..++.+|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (285)
T cd07861           1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEE---GVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLI   77 (285)
T ss_pred             CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccC---CchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEE
Confidence            488899999999999999998 578999999886432211   1224567899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          409 LELVTKGSLLNLYQR----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      |||+. ++|.+++..    ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++....... 
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~  156 (285)
T cd07861          78 FEFLS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVR  156 (285)
T ss_pred             EecCC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcc
Confidence            99998 578877754    348899999999999999999999999999999999999999999999999987543221 


Q ss_pred             -cccccCCCcccccccccC
Q 010676          484 -VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g  501 (504)
                       .....+++.|+|||++.+
T Consensus       157 ~~~~~~~~~~y~aPE~~~~  175 (285)
T cd07861         157 VYTHEVVTLWYRAPEVLLG  175 (285)
T ss_pred             cccCCcccccccChHHhcC
Confidence             233457899999998865


No 144
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=3.7e-26  Score=228.93  Aligned_cols=172  Identities=30%  Similarity=0.539  Sum_probs=149.6

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ....+|++.+.||+|+||.||+|.+ .++..|++|.+......     ....+.+|+.+++.+.|+||+++++.+.....
T Consensus        17 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~-----~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~   91 (296)
T cd06654          17 DPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGDE   91 (296)
T ss_pred             CcccceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCE
Confidence            3456899999999999999999997 57889999988653322     13557789999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          405 LYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      +|+||||+.+++|.+++....+++.++..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++....... 
T Consensus        92 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~i~~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~  171 (296)
T cd06654          92 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  171 (296)
T ss_pred             EEEeecccCCCCHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc
Confidence            9999999999999999988788999999999999999999999999999999999999999999999999987543322 


Q ss_pred             -cccccCCCcccccccccCC
Q 010676          484 -VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g~  502 (504)
                       .....|++.|+|||++.++
T Consensus       172 ~~~~~~~~~~y~aPE~~~~~  191 (296)
T cd06654         172 KRSTMVGTPYWMAPEVVTRK  191 (296)
T ss_pred             ccCcccCCccccCHHHHcCC
Confidence             2334689999999998764


No 145
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=3.5e-26  Score=229.21  Aligned_cols=172  Identities=31%  Similarity=0.542  Sum_probs=150.2

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ....+|++.+.||+|+||.||++.+ .++..||+|.+......     ....+.+|+.+++.++|+||+++++++...+.
T Consensus        16 ~~~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~-----~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~   90 (297)
T cd06656          16 DPKKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQP-----KKELIINEILVMRENKNPNIVNYLDSYLVGDE   90 (297)
T ss_pred             ChhhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccc-----hHHHHHHHHHHHHhCCCCCEeeEEEEEecCCE
Confidence            3456899999999999999999997 68999999988643321     12457789999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          405 LYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      +|+||||+++++|.+++.+..+++..+..++.|++.+|.|||+.||+|+||||+|||++.++.++|+|||++....... 
T Consensus        91 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~  170 (297)
T cd06656          91 LWVVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS  170 (297)
T ss_pred             EEEeecccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCcc
Confidence            9999999999999999988889999999999999999999999999999999999999999999999999987654332 


Q ss_pred             -cccccCCCcccccccccCC
Q 010676          484 -VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g~  502 (504)
                       .....+++.|+|||++.++
T Consensus       171 ~~~~~~~~~~y~aPE~~~~~  190 (297)
T cd06656         171 KRSTMVGTPYWMAPEVVTRK  190 (297)
T ss_pred             CcCcccCCccccCHHHHcCC
Confidence             2234689999999998764


No 146
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=99.94  E-value=5.3e-26  Score=220.75  Aligned_cols=169  Identities=28%  Similarity=0.498  Sum_probs=145.2

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||++.+ .++..|++|.+.....    ......+.+|+.+++.++|+||+++++.+.+.+.+|++
T Consensus         1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   76 (255)
T cd08219           1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKS----SSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIV   76 (255)
T ss_pred             CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcc----hHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEE
Confidence            488999999999999999998 5789999998864322    12345677899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          409 LELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |||+++++|.+++..   ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......  
T Consensus        77 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~  156 (255)
T cd08219          77 MEYCDGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAY  156 (255)
T ss_pred             EeeCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccc
Confidence            999999999988754   237888999999999999999999999999999999999999999999999987553322  


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....|++.|+|||++.+.
T Consensus       157 ~~~~~~~~~~~aPE~~~~~  175 (255)
T cd08219         157 ACTYVGTPYYVPPEIWENM  175 (255)
T ss_pred             cccccCCccccCHHHHccC
Confidence            2345689999999998754


No 147
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is 
Probab=99.94  E-value=2e-26  Score=229.04  Aligned_cols=171  Identities=28%  Similarity=0.475  Sum_probs=145.7

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||+|.+ .++..|++|.+...............+.+|+.+++.++|+||+++++++.+.+.+|+|
T Consensus         1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv   80 (298)
T cd07841           1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV   80 (298)
T ss_pred             CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence            478889999999999999997 5789999999875443322222335567899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          409 LELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      |||+ +++|.+++....  +++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++.......  .
T Consensus        81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~  159 (298)
T cd07841          81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKM  159 (298)
T ss_pred             Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccc
Confidence            9999 889999987754  8999999999999999999999999999999999999999999999999987654332  2


Q ss_pred             ccccCCCcccccccccC
Q 010676          485 KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g  501 (504)
                      ....+++.|+|||++.+
T Consensus       160 ~~~~~~~~y~aPE~~~~  176 (298)
T cd07841         160 THQVVTRWYRAPELLFG  176 (298)
T ss_pred             cccccceeeeCHHHHhC
Confidence            33357889999998854


No 148
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=99.94  E-value=3.2e-26  Score=260.60  Aligned_cols=173  Identities=24%  Similarity=0.311  Sum_probs=145.1

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      +++|++.++||+|+||.||+|.+ .++..||+|++.....  .......++.+|+.+++.++||||+++++++.+.+..|
T Consensus         1 igrYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~--~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~ly   78 (932)
T PRK13184          1 MQRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLS--ENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVY   78 (932)
T ss_pred             CCCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccc--cCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEE
Confidence            36899999999999999999998 5789999998864221  12233457889999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecC
Q 010676          407 IFLELVTKGSLLNLYQRY------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG  474 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFG  474 (504)
                      +||||++|++|.+++...            .++...+..++.||+.||.|||++||+||||||+|||++.+|.++|+|||
T Consensus        79 LVMEY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFG  158 (932)
T PRK13184         79 YTMPYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWG  158 (932)
T ss_pred             EEEEcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecC
Confidence            999999999999988631            24456678899999999999999999999999999999999999999999


Q ss_pred             cccccccCC--------------------cccccCCCcccccccccCC
Q 010676          475 LAKATKLND--------------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       475 LA~~~~~~~--------------------~~s~~GT~~YmAPEVL~g~  502 (504)
                      +++......                    ....+||+.|||||++.+.
T Consensus       159 LAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~  206 (932)
T PRK13184        159 AAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGV  206 (932)
T ss_pred             cceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCC
Confidence            997652110                    1124699999999998764


No 149
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=99.94  E-value=2.8e-27  Score=256.46  Aligned_cols=169  Identities=29%  Similarity=0.522  Sum_probs=145.3

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC----
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES----  403 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~----  403 (504)
                      .-|...+.||+|+||.||++++ .+|..||||.+.....    ........+|+++|++++|+|||++++.-++..    
T Consensus        13 y~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~----~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~   88 (732)
T KOG4250|consen   13 YLWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESS----LRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLV   88 (732)
T ss_pred             cceeehhhhcCCccceeeeecccccccchhHHhhhhhcc----cchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcc
Confidence            3577788999999999999997 7999999998865432    222456789999999999999999999866544    


Q ss_pred             --eEEEEEEeccCCCHHHHHHh----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEc--CCC--cEEEEec
Q 010676          404 --KLYIFLELVTKGSLLNLYQR----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVD--ANG--SVKLADF  473 (504)
Q Consensus       404 --~lyLVmEy~~ggsL~~ll~~----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd--~~g--~VKL~DF  473 (504)
                        ...+|||||.||+|..+++.    +++++.+++.++..++.||.|||++||+||||||.||++-  .+|  .-||+||
T Consensus        89 ~~~~vlvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDf  168 (732)
T KOG4250|consen   89 TRLPVLVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDF  168 (732)
T ss_pred             cccceEEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecc
Confidence              46899999999999999964    6799999999999999999999999999999999999995  334  3699999


Q ss_pred             CcccccccCC-cccccCCCcccccccccC
Q 010676          474 GLAKATKLND-VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       474 GLA~~~~~~~-~~s~~GT~~YmAPEVL~g  501 (504)
                      |.|+.+..+. ..+.+||..|++||++..
T Consensus       169 G~Arel~d~s~~~S~vGT~~YLhPel~E~  197 (732)
T KOG4250|consen  169 GAARELDDNSLFTSLVGTEEYLHPELYER  197 (732)
T ss_pred             cccccCCCCCeeeeecCchhhcChHHHhh
Confidence            9999876654 677889999999999983


No 150
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=99.94  E-value=4.6e-26  Score=222.26  Aligned_cols=173  Identities=47%  Similarity=0.822  Sum_probs=147.1

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccch----hhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGS----QAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~----~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      +|.++..||+|+||.||+|.+ .++..|++|.+.......    ........+.+|+.++++++||||+++++++...+.
T Consensus         1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (267)
T cd06628           1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH   80 (267)
T ss_pred             CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence            478889999999999999988 568899999886543322    223345678899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          405 LYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +|+||||+++++|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||+++....+.
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~  160 (267)
T cd06628          81 LNIFLEYVPGGSVAALLNNYGAFEETLVRNFVRQILKGLNYLHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANS  160 (267)
T ss_pred             cEEEEEecCCCCHHHHHHhccCccHHHHHHHHHHHHHHHHHHHhcCcccccCCHHHEEEcCCCCEEecccCCCccccccc
Confidence            99999999999999998764 57888999999999999999999999999999999999999999999999987654221


Q ss_pred             --------cccccCCCcccccccccCC
Q 010676          484 --------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --------~~s~~GT~~YmAPEVL~g~  502 (504)
                              .....|+..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~~~~~y~~pe~~~~~  187 (267)
T cd06628         161 LSTKTNGARPSLQGSVFWMAPEVVKQT  187 (267)
T ss_pred             ccCCccccccccCCCcCccChhHhccC
Confidence                    1123588999999988754


No 151
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=99.94  E-value=5.7e-26  Score=222.34  Aligned_cols=174  Identities=45%  Similarity=0.732  Sum_probs=146.5

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--CeE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--SKL  405 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--~~l  405 (504)
                      ..|++.+.||+|+||.||+|.+ .++..|++|.+...............+.+|+.+++.++|+||+++++++.+.  ..+
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~   81 (264)
T cd06653           2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL   81 (264)
T ss_pred             CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence            3689999999999999999998 5789999998754332222344556788999999999999999999988654  568


Q ss_pred             EEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          406 YIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      +++|||+++++|.+++.. ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||+++.....  
T Consensus        82 ~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~  161 (264)
T cd06653          82 SIFVEYMPGGSIKDQLKAYGALTENVTRRYTRQILQGVSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICM  161 (264)
T ss_pred             EEEEEeCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccc
Confidence            999999999999998865 45888999999999999999999999999999999999999999999999998754321  


Q ss_pred             ---CcccccCCCcccccccccCC
Q 010676          483 ---DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ---~~~s~~GT~~YmAPEVL~g~  502 (504)
                         ......++..|+|||++.+.
T Consensus       162 ~~~~~~~~~~~~~y~aPE~~~~~  184 (264)
T cd06653         162 SGTGIKSVTGTPYWMSPEVISGE  184 (264)
T ss_pred             cCccccccCCcccccCHhhhcCC
Confidence               12234589999999998764


No 152
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=99.94  E-value=2.7e-26  Score=230.88  Aligned_cols=160  Identities=31%  Similarity=0.476  Sum_probs=130.7

Q ss_pred             eeeecccCceeEEEEEcc---CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC--CCeEEEE
Q 010676          334 GDLLGRGSFGSVYEGISD---DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD--ESKLYIF  408 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~---~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--~~~lyLV  408 (504)
                      ++.||+|+||+||+|...   ++..||+|.+.....       ...+.+|+.+|+.++||||+++++++..  +..+|++
T Consensus         6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07868           6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTGI-------SMSACREIALLRELKHPNVISLQKVFLSHADRKVWLL   78 (317)
T ss_pred             ccccccCCCeEEEEEEEccCCCCceEEEEEECCCCC-------cHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEE
Confidence            467999999999999863   568899998753221       1235689999999999999999998843  5678999


Q ss_pred             EEeccCCCHHHHHHhc----------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE----cCCCcEEEEecC
Q 010676          409 LELVTKGSLLNLYQRY----------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILV----DANGSVKLADFG  474 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~----------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILL----d~~g~VKL~DFG  474 (504)
                      |||+.+ +|..++...          .+++..++.++.||+.||.|||++||+||||||+|||+    +.++.+||+|||
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07868          79 FDYAEH-DLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EeccCC-CHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecC
Confidence            999875 777766421          37888899999999999999999999999999999999    456789999999


Q ss_pred             cccccccC-----CcccccCCCcccccccccC
Q 010676          475 LAKATKLN-----DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       475 LA~~~~~~-----~~~s~~GT~~YmAPEVL~g  501 (504)
                      +++.....     ......||+.|||||++.+
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07868         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             ceeccCCCCccccccCCccccccccCCHHHcC
Confidence            99765422     1234568999999999875


No 153
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular 
Probab=99.94  E-value=4.4e-26  Score=220.96  Aligned_cols=164  Identities=27%  Similarity=0.476  Sum_probs=137.6

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEecc
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT  413 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~  413 (504)
                      +.||+|+||.||+|++ .++..||+|.+....    .......+.+|+.+++.++||||+++++++.....+|+||||+.
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~   76 (252)
T cd05084           1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETL----PPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQ   76 (252)
T ss_pred             CccCcccCccEEEEEEecCCceEEEEecCccC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeecc
Confidence            3699999999999998 578899999764221    12334568899999999999999999999999999999999999


Q ss_pred             CCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcccc----
Q 010676          414 KGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSC----  487 (504)
Q Consensus       414 ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~----  487 (504)
                      +++|.+++...  .+++..+..++.|++.||.|||++||+|+||||+|||++.++.+||+|||++...........    
T Consensus        77 ~~~L~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  156 (252)
T cd05084          77 GGDFLTFLRTEGPRLKVKELIQMVENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK  156 (252)
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence            99999998653  378899999999999999999999999999999999999999999999999875443221111    


Q ss_pred             cCCCcccccccccCC
Q 010676          488 RGTAFWMAPEVCSNP  502 (504)
Q Consensus       488 ~GT~~YmAPEVL~g~  502 (504)
                      ..+..|+|||++.++
T Consensus       157 ~~~~~y~aPE~~~~~  171 (252)
T cd05084         157 QIPVKWTAPEALNYG  171 (252)
T ss_pred             CCceeecCchhhcCC
Confidence            124569999998765


No 154
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=99.94  E-value=2.3e-26  Score=224.42  Aligned_cols=172  Identities=31%  Similarity=0.530  Sum_probs=147.4

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||++.+ .++..++||.+.....  ........+.+|+.+++.++|+||+++++++...+.+|+
T Consensus         2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~   79 (267)
T cd08229           2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDL--MDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNI   79 (267)
T ss_pred             chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhh--hhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEE
Confidence            5788999999999999999997 6889999998764332  223334678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          408 FLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +|||+++++|.+++..     ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd08229          80 VLELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             EEEecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccC
Confidence            9999999999998763     34788999999999999999999999999999999999999999999999998765433


Q ss_pred             C--cccccCCCcccccccccCC
Q 010676          483 D--VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~--~~s~~GT~~YmAPEVL~g~  502 (504)
                      .  .....|+..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~~ape~~~~~  181 (267)
T cd08229         160 TTAAHSLVGTPYYMSPERIHEN  181 (267)
T ss_pred             CcccccccCCcCccCHHHhcCC
Confidence            2  2344689999999998654


No 155
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=99.94  E-value=6.7e-26  Score=222.10  Aligned_cols=173  Identities=46%  Similarity=0.765  Sum_probs=146.1

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC--CCeEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD--ESKLY  406 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--~~~ly  406 (504)
                      .|+..+.||+|+||.||+|.+ .++..|++|.+...............+.+|+.+++.++||||+++++++..  ...+|
T Consensus         3 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~   82 (266)
T cd06651           3 NWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTLT   82 (266)
T ss_pred             CccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEEE
Confidence            688999999999999999988 578999999886544333333445678899999999999999999998765  46789


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC---
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN---  482 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~---  482 (504)
                      ++|||+++++|.+++... .+++..++.++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++......   
T Consensus        83 l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~  162 (266)
T cd06651          83 IFMEYMPGGSVKDQLKAYGALTESVTRKYTRQILEGMSYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMS  162 (266)
T ss_pred             EEEeCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCcccccccccc
Confidence            999999999999988654 5888899999999999999999999999999999999999999999999998754321   


Q ss_pred             --CcccccCCCcccccccccCC
Q 010676          483 --DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 --~~~s~~GT~~YmAPEVL~g~  502 (504)
                        ......++..|+|||++.+.
T Consensus       163 ~~~~~~~~~~~~y~aPE~~~~~  184 (266)
T cd06651         163 GTGIRSVTGTPYWMSPEVISGE  184 (266)
T ss_pred             CCccccCCccccccCHHHhCCC
Confidence              12334588999999998754


No 156
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=99.94  E-value=4e-28  Score=241.83  Aligned_cols=165  Identities=37%  Similarity=0.657  Sum_probs=147.7

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .-|.++..||+|+||.||+|+. .+|..+|||.+..       ...++++..||.++++++.|++|++|+.+.....+||
T Consensus        33 EVFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV-------~sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWI  105 (502)
T KOG0574|consen   33 EVFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPV-------DTDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWI  105 (502)
T ss_pred             HHHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCc-------cchHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEe
Confidence            4578889999999999999998 6899999998864       2345778899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHH--hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~--~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |||||..|++.++++  +..+.+.++..+++..+.||+|||...-||||||..|||++.+|..||+|||.|..+....  
T Consensus       106 VMEYCGAGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAK  185 (502)
T KOG0574|consen  106 VMEYCGAGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAK  185 (502)
T ss_pred             ehhhcCCCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHh
Confidence            999999999999885  4569999999999999999999999999999999999999999999999999987654332  


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....|||.||||||+.
T Consensus       186 RNTVIGTPFWMAPEVI~  202 (502)
T KOG0574|consen  186 RNTVIGTPFWMAPEVIE  202 (502)
T ss_pred             hCccccCcccccHHHHH
Confidence            34567999999999986


No 157
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=99.94  E-value=8.2e-26  Score=219.76  Aligned_cols=172  Identities=29%  Similarity=0.507  Sum_probs=147.5

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|... ++..|++|.+.......  ......+.+|+.++++++|+||+++++++...+.+++
T Consensus         2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~--~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~l   79 (267)
T cd08224           2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMD--AKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNI   79 (267)
T ss_pred             CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccc--hhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEE
Confidence            57999999999999999999985 89999999886433221  2234568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          408 FLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      ||||+++++|..++..     ..+++..+..++.|++.||.|||+.||+|+||||+||+++.++.++|+|||++......
T Consensus        80 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~  159 (267)
T cd08224          80 VLELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSK  159 (267)
T ss_pred             EEecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCC
Confidence            9999999999998854     23788999999999999999999999999999999999999999999999998764432


Q ss_pred             C--cccccCCCcccccccccCC
Q 010676          483 D--VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~--~~s~~GT~~YmAPEVL~g~  502 (504)
                      .  .....++..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~y~apE~~~~~  181 (267)
T cd08224         160 TTAAHSLVGTPYYMSPERIHEN  181 (267)
T ss_pred             CcccceecCCccccCHHHhccC
Confidence            2  2334589999999988654


No 158
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=99.94  E-value=5.6e-26  Score=223.50  Aligned_cols=168  Identities=28%  Similarity=0.446  Sum_probs=145.6

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||+|.+ .++..|++|++......   ......+.+|+.+++.++|+||+++++++.....+|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v   77 (286)
T cd07832           1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLE---GGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLV   77 (286)
T ss_pred             CceEEeecccCCCcEEEEEEECCCCceEEEEEEEccccc---chhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEE
Confidence            488999999999999999998 57899999988654321   12235688999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          409 LELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      |||+ +++|.+++..  ..+++..+..++.||+.+|.|||++||+|+||||+||+++.++.++|+|||++.......   
T Consensus        78 ~e~~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  156 (286)
T cd07832          78 MEYM-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRL  156 (286)
T ss_pred             eccc-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCc
Confidence            9999 9999998864  348999999999999999999999999999999999999999999999999987654432   


Q ss_pred             cccccCCCcccccccccC
Q 010676          484 VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g  501 (504)
                      .....|+..|+|||++.+
T Consensus       157 ~~~~~~~~~y~aPE~~~~  174 (286)
T cd07832         157 YSHQVATRWYRAPELLYG  174 (286)
T ss_pred             cccccCcccccCceeeec
Confidence            334568999999998854


No 159
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=99.94  E-value=4.4e-26  Score=226.09  Aligned_cols=171  Identities=27%  Similarity=0.357  Sum_probs=143.7

Q ss_pred             ccceeeeeeecccCceeEEEEEccC-----------------CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCC
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDD-----------------GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE  390 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~-----------------g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp  390 (504)
                      .++|++.+.||+|+||.||+|.+..                 +..||+|.+.....    ......+.+|+.++.+++|+
T Consensus         4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~l~~~   79 (296)
T cd05051           4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDAS----DNAREDFLKEVKILSRLSDP   79 (296)
T ss_pred             hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccC----HHHHHHHHHHHHHHHhcCCC
Confidence            3578999999999999999988632                 24578887753221    23456788999999999999


Q ss_pred             ceeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcC------------CChHHHHHHHHHHHHHHHHHHHCCceecCCCCC
Q 010676          391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH------------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCA  458 (504)
Q Consensus       391 nIV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~------------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~  458 (504)
                      ||+++++++..++.++++|||+.+++|..++....            +++..+..++.|++.||.|||++||+|+||||+
T Consensus        80 ~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH~~~i~H~dlkp~  159 (296)
T cd05051          80 NIARLLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLESLNFVHRDLATR  159 (296)
T ss_pred             CEeEEEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHHHcCccccccchh
Confidence            99999999999999999999999999999886643            788899999999999999999999999999999


Q ss_pred             cEEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          459 NILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       459 NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||+++.++.++|+|||+++......    .....+++.|||||++.++
T Consensus       160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  207 (296)
T cd05051         160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLG  207 (296)
T ss_pred             ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcC
Confidence            9999999999999999987644332    2233467889999988653


No 160
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=8.9e-27  Score=244.57  Aligned_cols=174  Identities=30%  Similarity=0.425  Sum_probs=154.9

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ++.+-|.+.+.||+|.|.+|-+|+. -+|..||||++.+.+....   ...++.+|++.++.++|||||+||.+..++..
T Consensus        15 kIAGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~---st~hlfqEVRCMKLVQHpNiVRLYEViDTQTK   91 (864)
T KOG4717|consen   15 KIAGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTL---STGHLFQEVRCMKLVQHPNIVRLYEVIDTQTK   91 (864)
T ss_pred             ceeeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchh---hhhHHHHHHHHHHHhcCcCeeeeeehhcccce
Confidence            4567899999999999999999988 6899999999976655433   33578899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHH--hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEc-CCCcEEEEecCccccccc
Q 010676          405 LYIFLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVD-ANGSVKLADFGLAKATKL  481 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~--~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd-~~g~VKL~DFGLA~~~~~  481 (504)
                      +|||+|+-++|+|++|+-  ..++.+..+++||.||+.||.|+|+..+|||||||+|+++- +-|-|||+||||+..+..
T Consensus        92 lyLiLELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~P  171 (864)
T KOG4717|consen   92 LYLILELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQP  171 (864)
T ss_pred             EEEEEEecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCC
Confidence            999999999999999884  35799999999999999999999999999999999998875 568999999999877655


Q ss_pred             C-CcccccCCCcccccccccCC
Q 010676          482 N-DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~-~~~s~~GT~~YmAPEVL~g~  502 (504)
                      + .....||+..|-|||+|.|-
T Consensus       172 G~kL~TsCGSLAYSAPEILLGD  193 (864)
T KOG4717|consen  172 GKKLTTSCGSLAYSAPEILLGD  193 (864)
T ss_pred             cchhhcccchhhccCchhhhcC
Confidence            4 46778999999999999874


No 161
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=99.94  E-value=9.3e-26  Score=218.82  Aligned_cols=170  Identities=31%  Similarity=0.504  Sum_probs=147.0

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++++.||.|+||.||.+.. .++..+++|.+.......   .....+.+|+.++++++|+||+++++++.+.+.++++
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~   77 (256)
T cd08221           1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSE---KERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIE   77 (256)
T ss_pred             CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccch---hHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEE
Confidence            488999999999999999987 678899999886543222   2345678999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          409 LELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |||+++++|.+++...   .+++..+..++.|++.+|.|||+.|++|+||+|+||+++.++.+||+|||++.......  
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~  157 (256)
T cd08221          78 MEYANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSM  157 (256)
T ss_pred             EEecCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEccccccc
Confidence            9999999999988764   48889999999999999999999999999999999999999999999999987654332  


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....|++.|+|||++.+.
T Consensus       158 ~~~~~~~~~y~ape~~~~~  176 (256)
T cd08221         158 AETVVGTPYYMSPELCQGV  176 (256)
T ss_pred             ccccCCCccccCHhhcCCC
Confidence            2345689999999988653


No 162
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=99.94  E-value=4.8e-26  Score=227.71  Aligned_cols=169  Identities=30%  Similarity=0.480  Sum_probs=142.9

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      +++|++.+.||.|+||.||+|.+ .++..||+|.+........    ...+.+|+.+++.++|+||+++++++...+.+|
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~----~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~   80 (301)
T cd07873           5 LETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGA----PCTAIREVSLLKDLKHANIVTLHDIIHTEKSLT   80 (301)
T ss_pred             ccceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCc----hhHHHHHHHHHHhcCCCCcceEEEEEecCCeEE
Confidence            46799999999999999999988 4788999998865432221    234668999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          407 IFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      +||||+.+ +|..++..  ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......  
T Consensus        81 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~  159 (301)
T cd07873          81 LVFEYLDK-DLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK  159 (301)
T ss_pred             EEEecccc-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC
Confidence            99999985 88887764  34888999999999999999999999999999999999999999999999998754322  


Q ss_pred             CcccccCCCcccccccccC
Q 010676          483 DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g  501 (504)
                      ......+++.|+|||++.+
T Consensus       160 ~~~~~~~~~~y~~PE~~~~  178 (301)
T cd07873         160 TYSNEVVTLWYRPPDILLG  178 (301)
T ss_pred             cccccceeecccCcHHHhC
Confidence            2233457899999998865


No 163
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=99.94  E-value=8.1e-26  Score=219.19  Aligned_cols=169  Identities=38%  Similarity=0.632  Sum_probs=147.4

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||.|+||.||+|.+ .++..+++|.+.....     .....+.+|+.+++.++||||+++++++...+.+|+
T Consensus         3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~-----~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l   77 (262)
T cd06613           3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPG-----DDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWI   77 (262)
T ss_pred             cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCch-----hhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEE
Confidence            5799999999999999999998 5678899998864322     134678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--C
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--D  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~  483 (504)
                      +|||+.+++|.+++..  ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......  .
T Consensus        78 ~~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~  157 (262)
T cd06613          78 VMEYCGGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAK  157 (262)
T ss_pred             EEeCCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhc
Confidence            9999999999998865  46899999999999999999999999999999999999999999999999998764432  2


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....++..|+|||++.+.
T Consensus       158 ~~~~~~~~~y~~Pe~~~~~  176 (262)
T cd06613         158 RKSFIGTPYWMAPEVAAVE  176 (262)
T ss_pred             cccccCCccccCchhhccc
Confidence            2344688999999998654


No 164
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=99.94  E-value=5.6e-26  Score=223.93  Aligned_cols=172  Identities=25%  Similarity=0.393  Sum_probs=141.6

Q ss_pred             cccceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeec
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDK  400 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~  400 (504)
                      ..++|++.+.||+|+||.||+|.+.      .+..||+|.+.....    ......+.+|+.+++.++|+||+++++++.
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~----~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~   79 (277)
T cd05062           4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAAS----MRERIEFLNEASVMKEFNCHHVVRLLGVVS   79 (277)
T ss_pred             cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEc
Confidence            4567999999999999999998752      356799997643211    122356789999999999999999999999


Q ss_pred             CCCeEEEEEEeccCCCHHHHHHhc-----------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEE
Q 010676          401 DESKLYIFLELVTKGSLLNLYQRY-----------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVK  469 (504)
Q Consensus       401 ~~~~lyLVmEy~~ggsL~~ll~~~-----------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VK  469 (504)
                      ....+|+||||+++++|.+++...           .++...+..++.|++.||.|||++|++|+||||+|||++.++.++
T Consensus        80 ~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~  159 (277)
T cd05062          80 QGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVK  159 (277)
T ss_pred             CCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCcchheEEEcCCCCEE
Confidence            999999999999999999988652           245678889999999999999999999999999999999999999


Q ss_pred             EEecCcccccccCCc----ccccCCCcccccccccCC
Q 010676          470 LADFGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       470 L~DFGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      |+|||+++.......    ....+++.|||||++.++
T Consensus       160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (277)
T cd05062         160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDG  196 (277)
T ss_pred             ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcC
Confidence            999999875432221    123457789999998764


No 165
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=99.94  E-value=3.9e-26  Score=225.02  Aligned_cols=171  Identities=29%  Similarity=0.413  Sum_probs=142.5

Q ss_pred             ccceeeeeeecccCceeEEEEEccC------CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDD------GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~------g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      ..+|++.+.||+|+||.||+|....      ...|++|.+....    .......+.+|+.++..++||||+++++++..
T Consensus         4 ~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~----~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~   79 (283)
T cd05048           4 LSAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENA----EPKVQQEFRQEAELMSDLQHPNIVCLLGVCTK   79 (283)
T ss_pred             hHHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCC----CHHHHHHHHHHHHHHHhcCCcccceEEEEEcC
Confidence            3578999999999999999998632      2578889775322    12334568899999999999999999999999


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA  464 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~  464 (504)
                      ....|++|||+++++|.+++...                 .+++..+..++.||+.||.|||++||+|+||||+|||++.
T Consensus        80 ~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nil~~~  159 (283)
T cd05048          80 EQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLSSHHFVHRDLAARNCLVGE  159 (283)
T ss_pred             CCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccccceEEEcC
Confidence            99999999999999999988652                 3677889999999999999999999999999999999999


Q ss_pred             CCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          465 NGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       465 ~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ++.++|+|||+++......    .....+++.|||||++.++
T Consensus       160 ~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  201 (283)
T cd05048         160 GLTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYG  201 (283)
T ss_pred             CCcEEECCCcceeeccccccccccCCCcccccccCHHHhccC
Confidence            9999999999987543222    2233468889999988654


No 166
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=99.94  E-value=4.3e-26  Score=230.19  Aligned_cols=169  Identities=26%  Similarity=0.446  Sum_probs=139.1

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCc----eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGF----FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~----~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      .+|++.+.||+|+||.||+|.+. ++.    .||+|.+....    .......+.+|+.+++.++||||+++++++... 
T Consensus         7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-   81 (316)
T cd05108           7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREAT----SPKANKEILDEAYVMASVDNPHVCRLLGICLTS-   81 (316)
T ss_pred             hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-
Confidence            47999999999999999999863 333    48888775321    122345688899999999999999999998765 


Q ss_pred             eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      ..+++++|+.+|+|.+++...  .++...+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~  161 (316)
T cd05108          82 TVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA  161 (316)
T ss_pred             CceeeeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccC
Confidence            578999999999999988764  478888999999999999999999999999999999999999999999999986543


Q ss_pred             CCc----ccccCCCcccccccccCC
Q 010676          482 NDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      ...    ....++..|||||++.+.
T Consensus       162 ~~~~~~~~~~~~~~~y~apE~~~~~  186 (316)
T cd05108         162 DEKEYHAEGGKVPIKWMALESILHR  186 (316)
T ss_pred             CCcceeccCCccceeecChHHhccC
Confidence            221    122346789999988654


No 167
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their 
Probab=99.94  E-value=5.3e-26  Score=221.58  Aligned_cols=173  Identities=35%  Similarity=0.667  Sum_probs=146.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchh-hHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQ-AKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~-~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .|+.++.||+|+||.||++.+ .++..||+|.+........ .......+.+|+.+++.++|+||+++++++...+.+++
T Consensus         1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   80 (268)
T cd06630           1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL   80 (268)
T ss_pred             CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence            478889999999999999997 6889999998864332221 22345778899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-cEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-SVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-~VKL~DFGLA~~~~~~~--  483 (504)
                      ||||+.+++|.+++... .+++..+..++.||+.||.|||++|++|+||+|.||+++.++ .++|+|||++.......  
T Consensus        81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~ql~~al~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~  160 (268)
T cd06630          81 FVEWMAGGSVSHLLSKYGAFKEAVIINYTEQLLRGLSYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTG  160 (268)
T ss_pred             EEeccCCCcHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccccccccccccccc
Confidence            99999999999988654 588899999999999999999999999999999999998776 59999999987654321  


Q ss_pred             ----cccccCCCcccccccccCC
Q 010676          484 ----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ----~~s~~GT~~YmAPEVL~g~  502 (504)
                          .....||..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~~~~PE~~~~~  183 (268)
T cd06630         161 AGEFQGQLLGTIAFMAPEVLRGE  183 (268)
T ss_pred             CCccccccccccceeCHhHhccC
Confidence                1234588999999998654


No 168
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.94  E-value=8.7e-28  Score=272.50  Aligned_cols=176  Identities=40%  Similarity=0.729  Sum_probs=154.3

Q ss_pred             ccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      +..+.-+|+.+..||.|.||.||.|.+ .+|...|+|.++.....   ......+.+|..+|..|+|||+|++|++-.+.
T Consensus      1230 lsnV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~---~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHR 1306 (1509)
T KOG4645|consen 1230 LSNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSD---HKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHR 1306 (1509)
T ss_pred             hccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccc---cccCcchHHHHHHHHhccCccccccCceeecH
Confidence            445666899999999999999999998 78999999998765543   34456788999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      +.+||+||||.+|+|.++++.++ .++.....|..|++.||.|||++|||||||||.||+++.+|.+|++|||.|..+..
T Consensus      1307 ekv~IFMEyC~~GsLa~ll~~gri~dE~vt~vyt~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~ 1386 (1509)
T KOG4645|consen 1307 EKVYIFMEYCEGGSLASLLEHGRIEDEMVTRVYTKQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKN 1386 (1509)
T ss_pred             HHHHHHHHHhccCcHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecC
Confidence            99999999999999999999877 44555667889999999999999999999999999999999999999999987654


Q ss_pred             CC------cccccCCCcccccccccCC
Q 010676          482 ND------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~------~~s~~GT~~YmAPEVL~g~  502 (504)
                      +.      .....||+-|||||++.|-
T Consensus      1387 ~~~~~~~el~~~~GT~~YMAPEvit~t 1413 (1509)
T KOG4645|consen 1387 NAQTMPGELQSMMGTPMYMAPEVITGT 1413 (1509)
T ss_pred             chhcCCHHHHhhcCCchhcCchhhccc
Confidence            42      3456799999999999863


No 169
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds 
Probab=99.94  E-value=5.3e-26  Score=222.25  Aligned_cols=168  Identities=29%  Similarity=0.457  Sum_probs=143.3

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      ++|++++.||+|+||.||++...++..+|+|.+.....      ....+.+|+.++..++||||+++++++...+.+|++
T Consensus         4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (256)
T cd05113           4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSM------SEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIV   77 (256)
T ss_pred             HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCcc------cHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEE
Confidence            46899999999999999999887777899998753221      124578899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccc
Q 010676          409 LELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s  486 (504)
                      |||+.+++|.+++...  .+++..+..++.||+.||.|||++||+|+||||.|||++.++.+||+|||+++.........
T Consensus        78 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~  157 (256)
T cd05113          78 TEYMSNGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTS  157 (256)
T ss_pred             EEcCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceee
Confidence            9999999999988753  48899999999999999999999999999999999999999999999999987654332222


Q ss_pred             ---ccCCCcccccccccCC
Q 010676          487 ---CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ---~~GT~~YmAPEVL~g~  502 (504)
                         ..++..|+|||++.++
T Consensus       158 ~~~~~~~~~y~~pe~~~~~  176 (256)
T cd05113         158 SVGSKFPVRWSPPEVLLYS  176 (256)
T ss_pred             cCCCccChhhCCHHHHhcC
Confidence               2356779999998753


No 170
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding 
Probab=99.94  E-value=1.1e-25  Score=225.85  Aligned_cols=171  Identities=30%  Similarity=0.548  Sum_probs=149.5

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ....|++.+.||.|+||.||+|.+ .++..|++|.+......     ....+.+|+.+++.++|+||+++++++...+.+
T Consensus        17 ~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~-----~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~   91 (296)
T cd06655          17 PKKKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQP-----KKELIINEILVMKELKNPNIVNFLDSFLVGDEL   91 (296)
T ss_pred             CcceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCc-----hHHHHHHHHHHHHhcCCCceeeeeeeEecCceE
Confidence            345799999999999999999997 68899999988643221     234578899999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          406 YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |+||||+.+++|..++....+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......  
T Consensus        92 ~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~  171 (296)
T cd06655          92 FVVMEYLAGGSLTDVVTETCMDEAQIAAVCRECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSK  171 (296)
T ss_pred             EEEEEecCCCcHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhccccccc
Confidence            999999999999999988889999999999999999999999999999999999999999999999999987644332  


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....++..|+|||++.++
T Consensus       172 ~~~~~~~~~y~aPE~~~~~  190 (296)
T cd06655         172 RSTMVGTPYWMAPEVVTRK  190 (296)
T ss_pred             CCCcCCCccccCcchhcCC
Confidence            2234689999999998754


No 171
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly 
Probab=99.94  E-value=5.5e-26  Score=225.87  Aligned_cols=169  Identities=30%  Similarity=0.451  Sum_probs=142.7

Q ss_pred             cceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      .+|.+.+.||+|+||.||++..      .++..+++|.+....     ......+.+|+.++++++|+||+++++++...
T Consensus         5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (288)
T cd05093           5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDAS-----DNARKDFHREAELLTNLQHEHIVKFYGVCVEG   79 (288)
T ss_pred             HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcC-----HHHHHHHHHHHHHHHhCCCCCcceEEEEEecC
Confidence            4789999999999999999974      245678888775321     22345688999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc--------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcE
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY--------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSV  468 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~--------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~V  468 (504)
                      +.+|+||||+.+++|.+++...              .+++..+..++.||+.||.|||++||+||||||+|||++.++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~  159 (288)
T cd05093          80 DPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLV  159 (288)
T ss_pred             CccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccCCcE
Confidence            9999999999999999988643              27889999999999999999999999999999999999999999


Q ss_pred             EEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          469 KLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       469 KL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +|+|||+++......    .....++..|+|||++.++
T Consensus       160 kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  197 (288)
T cd05093         160 KIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR  197 (288)
T ss_pred             EeccCCccccccCCceeecCCCCCccccccCHHHhccC
Confidence            999999987543322    1223457789999998764


No 172
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=99.94  E-value=3.7e-26  Score=222.24  Aligned_cols=171  Identities=30%  Similarity=0.478  Sum_probs=148.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|++.+.||.|+||.||+|.+ .++..|++|++......  .......+.+|+.++++++||||+++++++.....+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   78 (258)
T cd05578           1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCV--EKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLV   78 (258)
T ss_pred             CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhc--chhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEE
Confidence            488999999999999999998 47899999988643221  123456788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-Cccc
Q 010676          409 LELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-~~~s  486 (504)
                      |||+.+++|..++... .+.+..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++...... ....
T Consensus        79 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~  158 (258)
T cd05578          79 VDLLLGGDLRYHLSQKVKFSEEQVKFWICEIVLALEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTS  158 (258)
T ss_pred             EeCCCCCCHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccc
Confidence            9999999999998766 7999999999999999999999999999999999999999999999999998765433 2334


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..|+..|+|||++.+.
T Consensus       159 ~~~~~~y~~PE~~~~~  174 (258)
T cd05578         159 TSGTPGYMAPEVLCRQ  174 (258)
T ss_pred             cCCChhhcCHHHHccc
Confidence            5688999999998653


No 173
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=99.94  E-value=6e-26  Score=218.45  Aligned_cols=164  Identities=30%  Similarity=0.490  Sum_probs=142.0

Q ss_pred             eeecccCceeEEEEEccC----CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEE
Q 010676          335 DLLGRGSFGSVYEGISDD----GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~----g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      +.||+|+||.||+|.+..    +..|++|.+.......    ....+.+|+.++..++|+||+++++++.....+++|||
T Consensus         1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e   76 (262)
T cd00192           1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEE----ERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLE   76 (262)
T ss_pred             CccccCCceEEEEEEEecCCCCCceEEeEeeccccchh----HHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEE
Confidence            469999999999999853    8899999886433221    35678899999999999999999999999999999999


Q ss_pred             eccCCCHHHHHHh----------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          411 LVTKGSLLNLYQR----------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       411 y~~ggsL~~ll~~----------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      |+++++|.+++..          ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++....
T Consensus        77 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~  156 (262)
T cd00192          77 YMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY  156 (262)
T ss_pred             eccCCcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence            9999999999876          458999999999999999999999999999999999999999999999999998655


Q ss_pred             cCC----cccccCCCcccccccccCC
Q 010676          481 LND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       481 ~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ...    .....++..|+|||++.+.
T Consensus       157 ~~~~~~~~~~~~~~~~y~aPE~~~~~  182 (262)
T cd00192         157 DDDYYRKKTGGKLPIRWMAPESLKDG  182 (262)
T ss_pred             cccccccccCCCcCccccCHHHhccC
Confidence            432    3344578899999988753


No 174
>PTZ00284 protein kinase; Provisional
Probab=99.94  E-value=1.5e-25  Score=239.90  Aligned_cols=167  Identities=21%  Similarity=0.310  Sum_probs=131.9

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC------CCceeEEeeeec
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE------HENIVQYYGTDK  400 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~------HpnIV~l~~~~~  400 (504)
                      .++|+++++||+|+||+||+|++ .++..||||++.....      ....+..|+.++..++      |.+|++++++|.
T Consensus       128 ~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~~------~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~  201 (467)
T PTZ00284        128 TQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVPK------YTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ  201 (467)
T ss_pred             CCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecchh------hHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE
Confidence            46899999999999999999998 5788999998863221      1123345555555554      556899998887


Q ss_pred             CC-CeEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCC-----------
Q 010676          401 DE-SKLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANG-----------  466 (504)
Q Consensus       401 ~~-~~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g-----------  466 (504)
                      .. ..+|+||+++ +++|.+++.. ..+++..+..|+.||+.||.|||. .|||||||||+|||++.++           
T Consensus       202 ~~~~~~~iv~~~~-g~~l~~~l~~~~~l~~~~~~~i~~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~  280 (467)
T PTZ00284        202 NETGHMCIVMPKY-GPCLLDWIMKHGPFSHRHLAQIIFQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRAL  280 (467)
T ss_pred             cCCceEEEEEecc-CCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEecCCccccccccccc
Confidence            64 5789999988 5577776644 569999999999999999999997 5999999999999998765           


Q ss_pred             -----cEEEEecCcccccccCCcccccCCCcccccccccCC
Q 010676          467 -----SVKLADFGLAKATKLNDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       467 -----~VKL~DFGLA~~~~~~~~~s~~GT~~YmAPEVL~g~  502 (504)
                           .+||+|||++.... ......+||+.|||||++.+.
T Consensus       281 ~~~~~~vkl~DfG~~~~~~-~~~~~~~gt~~Y~APE~~~~~  320 (467)
T PTZ00284        281 PPDPCRVRICDLGGCCDER-HSRTAIVSTRHYRSPEVVLGL  320 (467)
T ss_pred             CCCCceEEECCCCccccCc-cccccccCCccccCcHHhhcC
Confidence                 49999999876432 223456799999999998765


No 175
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=99.94  E-value=3.3e-26  Score=224.83  Aligned_cols=170  Identities=31%  Similarity=0.437  Sum_probs=143.3

Q ss_pred             cceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      +.|.+.+.||+|+||.||+|...      ++..||+|.+.....    ......+.+|+.+|+.++|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   80 (280)
T cd05049           5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETAS----NDARKDFEREAELLTNFQHENIVKFYGVCTEG   80 (280)
T ss_pred             HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCC----HHHHHHHHHHHHHHHhcCCCCchheeeEEecC
Confidence            46888999999999999999863      357899998753221    22346788999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc---------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY---------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS  467 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~---------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~  467 (504)
                      ..+|+||||+++++|.+++...               .+++..+..++.||+.||.|||++|++||||||+|||++.++.
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~  160 (280)
T cd05049          81 DPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLASQHFVHRDLATRNCLVGYDLV  160 (280)
T ss_pred             CCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeeccccccceEEEcCCCe
Confidence            9999999999999999998653               2677888999999999999999999999999999999999999


Q ss_pred             EEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          468 VKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       468 VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ++|+|||++.......    .....+++.|+|||++.++
T Consensus       161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  199 (280)
T cd05049         161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYR  199 (280)
T ss_pred             EEECCcccceecccCcceecCCCCcccceecChhhhccC
Confidence            9999999987543222    1233467889999998764


No 176
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=99.94  E-value=7e-26  Score=222.80  Aligned_cols=170  Identities=24%  Similarity=0.393  Sum_probs=144.8

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|.+. ++..||+|++.......   ...+.+.+|+.+++.++|+||+++++++.....+|+
T Consensus         1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~   77 (286)
T cd07847           1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDP---VIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHL   77 (286)
T ss_pred             CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCc---cccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEE
Confidence            36899999999999999999984 78999999886432211   112456789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      ||||++++.|..++.. ..+++..+..++.||+.+|.|||++||+|+||||.||+++.++.++|+|||++.......  .
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~ql~~~l~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07847          78 VFEYCDHTVLNELEKNPRGVPEHLIKKIIWQTLQAVNFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDY  157 (286)
T ss_pred             EEeccCccHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccc
Confidence            9999999888887754 358999999999999999999999999999999999999999999999999987654332  2


Q ss_pred             ccccCCCcccccccccC
Q 010676          485 KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g  501 (504)
                      ....++..|+|||++.+
T Consensus       158 ~~~~~~~~~~aPE~~~~  174 (286)
T cd07847         158 TDYVATRWYRAPELLVG  174 (286)
T ss_pred             cCcccccccCCHHHHhC
Confidence            33458899999999865


No 177
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=99.94  E-value=7.6e-26  Score=223.67  Aligned_cols=169  Identities=34%  Similarity=0.506  Sum_probs=140.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC--C
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD--E  402 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--~  402 (504)
                      +|++.+.||+|+||+||++..     .++..||+|.+.....    ......+.+|+.+|+.++||||+++++++..  .
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~   80 (283)
T cd05080           5 YLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECG----QQNTSGWKKEINILKTLYHENIVKYKGCCSEQGG   80 (283)
T ss_pred             hceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCC
Confidence            458999999999999988652     4678999998764321    1233567789999999999999999998755  3


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      ..+|++|||+.+++|.+++....+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||+++.....
T Consensus        81 ~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~~~l~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~  160 (283)
T cd05080          81 KGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFAQQICEGMAYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG  160 (283)
T ss_pred             ceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCc
Confidence            46899999999999999998888999999999999999999999999999999999999999999999999998765432


Q ss_pred             Cc-----ccccCCCcccccccccCC
Q 010676          483 DV-----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~-----~s~~GT~~YmAPEVL~g~  502 (504)
                      ..     ....++..|+|||++.+.
T Consensus       161 ~~~~~~~~~~~~~~~~~~PE~~~~~  185 (283)
T cd05080         161 HEYYRVREDGDSPVFWYAVECLKEN  185 (283)
T ss_pred             chhhccCCCCCCCceeeCHhHhccc
Confidence            21     122356779999988654


No 178
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=99.94  E-value=7.5e-26  Score=224.23  Aligned_cols=169  Identities=28%  Similarity=0.446  Sum_probs=138.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCc----eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGF----FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~----~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      ++|++++.||+|+||.||+|.+ .++.    .+++|.+..    .........+..|+.++..+.||||+++++++.. .
T Consensus         7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~----~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~   81 (279)
T cd05111           7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQD----RSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-A   81 (279)
T ss_pred             hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeeccc----ccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-C
Confidence            5788999999999999999987 3454    356665532    1223344667888989999999999999998764 5


Q ss_pred             eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      .+++++||+++|+|.+++...  .+++..+..|+.||+.||.|||+++++||||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~  161 (279)
T cd05111          82 SLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP  161 (279)
T ss_pred             ccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence            678999999999999998653  488999999999999999999999999999999999999999999999999876432


Q ss_pred             CC----cccccCCCcccccccccCC
Q 010676          482 ND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..    .....++..|+|||++.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~pE~~~~~  186 (279)
T cd05111         162 DDKKYFYSEHKTPIKWMALESILFG  186 (279)
T ss_pred             CCcccccCCCCCcccccCHHHhccC
Confidence            22    1233467889999998754


No 179
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=99.94  E-value=2.5e-26  Score=223.40  Aligned_cols=171  Identities=29%  Similarity=0.444  Sum_probs=146.3

Q ss_pred             cccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      -..+|++++.||.|+||.||+|.+.++..+++|.+....     ......+.+|+.+++.++|+||+++++++.....+|
T Consensus         4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~   78 (261)
T cd05148           4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDD-----LLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVY   78 (261)
T ss_pred             cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccc-----hhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeE
Confidence            345799999999999999999999889999999875422     122346788999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          407 IFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +||||+++++|.+++..   ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.......
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~  158 (261)
T cd05148          79 IITELMEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDV  158 (261)
T ss_pred             EEEeecccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCcc
Confidence            99999999999999865   347889999999999999999999999999999999999999999999999987654322


Q ss_pred             --cccccCCCcccccccccCC
Q 010676          484 --VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g~  502 (504)
                        .....++..|+|||++.++
T Consensus       159 ~~~~~~~~~~~~~~PE~~~~~  179 (261)
T cd05148         159 YLSSDKKIPYKWTAPEAASHG  179 (261)
T ss_pred             ccccCCCCceEecCHHHHccC
Confidence              1223467789999988654


No 180
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.94  E-value=7.6e-26  Score=227.21  Aligned_cols=176  Identities=28%  Similarity=0.445  Sum_probs=143.7

Q ss_pred             cccccccceeeeeeecccCceeEEEEEcc--------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCcee
Q 010676          323 RFKRIITYWQKGDLLGRGSFGSVYEGISD--------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIV  393 (504)
Q Consensus       323 ~~~~~~~~y~i~k~LG~G~FG~VYka~~~--------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV  393 (504)
                      ++....++|.+++.||+|+||.||++.+.        +...+|+|.+....    .......+.+|+.++..+ +|+||+
T Consensus        12 ~~~~~~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~~h~~i~   87 (307)
T cd05098          12 RWEVPRDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDA----TEKDLSDLISEMEMMKMIGKHKNII   87 (307)
T ss_pred             cceeehHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCC----ChHHHHHHHHHHHHHHHhcCCCCEe
Confidence            34444578999999999999999999752        23569999775321    122345678899999999 799999


Q ss_pred             EEeeeecCCCeEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCC
Q 010676          394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK  456 (504)
Q Consensus       394 ~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLK  456 (504)
                      ++++++...+.+|+||||+.+++|.+++...                 .+++.+++.++.||+.||.|||++|++|||||
T Consensus        88 ~~~~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlk  167 (307)
T cd05098          88 NLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLASKKCIHRDLA  167 (307)
T ss_pred             eEEEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCccccccc
Confidence            9999999999999999999999999998653                 37788899999999999999999999999999


Q ss_pred             CCcEEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          457 CANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       457 P~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      |+|||++.++.+||+|||++.......    .....+++.|||||++.++
T Consensus       168 p~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  217 (307)
T cd05098         168 ARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR  217 (307)
T ss_pred             HHheEEcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccC
Confidence            999999999999999999987543221    1112245689999988764


No 181
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.94  E-value=3e-26  Score=244.63  Aligned_cols=175  Identities=30%  Similarity=0.498  Sum_probs=146.3

Q ss_pred             cccceeeeeeecccCceeEEEEEcc--CC--ce-EEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISD--DG--FF-FAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~--~g--~~-vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      ...+..+.++||+|.||.||+|...  ++  .. ||+|..+..  .......+.++++|.+++++++|||||++||++..
T Consensus       155 ~H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~--~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~  232 (474)
T KOG0194|consen  155 SHSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGS--SELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVL  232 (474)
T ss_pred             eccCccccceeecccccEEEEEEEEecCCceeeeeEEEeeccc--ccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcC
Confidence            3445566799999999999999873  22  23 899977641  22345667889999999999999999999999999


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ...+|||||+|.||+|.+++++++  ++..+...++.+.+.||+|||++++|||||-..|+|++.++.+||+||||++..
T Consensus       233 ~~Pl~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~  312 (474)
T KOG0194|consen  233 EEPLMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAG  312 (474)
T ss_pred             CCccEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCC
Confidence            999999999999999999998875  999999999999999999999999999999999999999999999999998764


Q ss_pred             ccCC-cc-cccCCCcccccccccCCC
Q 010676          480 KLND-VK-SCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       480 ~~~~-~~-s~~GT~~YmAPEVL~g~~  503 (504)
                      ..-. .. ...-...|+|||.+..+.
T Consensus       313 ~~~~~~~~~~klPirWLAPEtl~~~~  338 (474)
T KOG0194|consen  313 SQYVMKKFLKKLPIRWLAPETLNTGI  338 (474)
T ss_pred             cceeeccccccCcceecChhhhccCc
Confidence            3111 11 223456799999998653


No 182
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk 
Probab=99.94  E-value=1e-25  Score=218.91  Aligned_cols=167  Identities=29%  Similarity=0.443  Sum_probs=144.5

Q ss_pred             ccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .++|++.+.||.|+||.||+|... +..|++|.+.....      ...++.+|+.+++.++|+||+++++++...+..|+
T Consensus         5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   77 (256)
T cd05039           5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST------AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYI   77 (256)
T ss_pred             hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh------HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEE
Confidence            357899999999999999999875 78899998863221      34678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          408 FLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      ||||+++++|.+++...   .+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||+++.......
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~  157 (256)
T cd05039          78 VTEYMAKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD  157 (256)
T ss_pred             EEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccc
Confidence            99999999999998764   489999999999999999999999999999999999999999999999999876533222


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                       ....+..|+|||++.++
T Consensus       158 -~~~~~~~~~ape~~~~~  174 (256)
T cd05039         158 -SGKLPVKWTAPEALREK  174 (256)
T ss_pred             -cCCCcccccCchhhcCC
Confidence             33456779999988654


No 183
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including 
Probab=99.94  E-value=4.4e-26  Score=227.33  Aligned_cols=170  Identities=26%  Similarity=0.357  Sum_probs=140.7

Q ss_pred             cceeeeeeecccCceeEEEEEccC---------------CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCcee
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDD---------------GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIV  393 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~---------------g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV  393 (504)
                      ++|++.+.||+|+||.||++.+..               ...||+|.+....    .......+.+|+.++++++|+||+
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~i~   80 (295)
T cd05097           5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADV----TKTARNDFLKEIKIMSRLKNPNII   80 (295)
T ss_pred             HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCC----CHHHHHHHHHHHHHHHhCCCCCcC
Confidence            479999999999999999987632               2358899775321    122345688999999999999999


Q ss_pred             EEeeeecCCCeEEEEEEeccCCCHHHHHHhc-------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 010676          394 QYYGTDKDESKLYIFLELVTKGSLLNLYQRY-------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANI  460 (504)
Q Consensus       394 ~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~-------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NI  460 (504)
                      ++++++...+.+|+||||+.+++|.+++...             .+.+..+..++.|++.||.|||++|++|+||||+||
T Consensus        81 ~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Ni  160 (295)
T cd05097          81 RLLGVCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLASLNFVHRDLATRNC  160 (295)
T ss_pred             eEEEEEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHHhcCeeccccChhhE
Confidence            9999999999999999999999999988543             257788899999999999999999999999999999


Q ss_pred             EEcCCCcEEEEecCcccccccCCc----ccccCCCcccccccccCC
Q 010676          461 LVDANGSVKLADFGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       461 LLd~~g~VKL~DFGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      |++.++.+||+|||++........    ....++..|+|||++.++
T Consensus       161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  206 (295)
T cd05097         161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLG  206 (295)
T ss_pred             EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccC
Confidence            999999999999999875433221    222356789999988654


No 184
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=99.94  E-value=5.2e-26  Score=222.88  Aligned_cols=161  Identities=25%  Similarity=0.374  Sum_probs=130.9

Q ss_pred             eecccCceeEEEEEccC---CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          336 LLGRGSFGSVYEGISDD---GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       336 ~LG~G~FG~VYka~~~~---g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      .||+|+||.||+|...+   ...+++|.+....    .......+.+|+.+++.++|+||+++++.+.....+|+||||+
T Consensus         2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~   77 (269)
T cd05042           2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASA----TPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFC   77 (269)
T ss_pred             cCCccCCceEEEEEEecCCCCeEEEEeecCccC----ChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeC
Confidence            58999999999997533   3466777554221    2233456788999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          413 TKGSLLNLYQRYH------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       413 ~ggsL~~ll~~~~------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      .+|+|.+++....      +.+..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......   
T Consensus        78 ~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~  157 (269)
T cd05042          78 PLGDLKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI  157 (269)
T ss_pred             CCCcHHHHHHhccccccccccHHHHHHHHHHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence            9999999886542      3567788999999999999999999999999999999999999999999986533221   


Q ss_pred             -cccccCCCccccccccc
Q 010676          484 -VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~  500 (504)
                       .....++..|+|||++.
T Consensus       158 ~~~~~~~~~~y~aPE~~~  175 (269)
T cd05042         158 TKDCHAVPLRWLAPELVE  175 (269)
T ss_pred             ccCCCCCcccccCHHHHh
Confidence             12234577899999874


No 185
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=99.94  E-value=6.2e-27  Score=219.76  Aligned_cols=171  Identities=30%  Similarity=0.479  Sum_probs=147.3

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ..|...+.||+|+||+||+|++ .++..||+|.+.+.+...-.   .....+||-+|+.++|.|||++++....+..+.+
T Consensus         2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegv---pssalreicllkelkhknivrl~dvlhsdkkltl   78 (292)
T KOG0662|consen    2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGV---PSSALREICLLKELKHKNIVRLHDVLHSDKKLTL   78 (292)
T ss_pred             cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCC---cHHHHHHHHHHHHhhhcceeehhhhhccCceeEE
Confidence            3567778899999999999998 68899999999875543322   2345699999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--C
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--D  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~  483 (504)
                      |+|||.. +|..++..  +.++.+.++.++.|++.||.|+|+++++||||||.|+||+.+|.+||+|||+++.....  .
T Consensus        79 vfe~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrc  157 (292)
T KOG0662|consen   79 VFEFCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRC  157 (292)
T ss_pred             eHHHhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEe
Confidence            9999976 78887765  34888899999999999999999999999999999999999999999999999876544  3


Q ss_pred             cccccCCCcccccccccCCC
Q 010676          484 VKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~~  503 (504)
                      ....+-|.+|.+|.|+.|..
T Consensus       158 ysaevvtlwyrppdvlfgak  177 (292)
T KOG0662|consen  158 YSAEVVTLWYRPPDVLFGAK  177 (292)
T ss_pred             eeceeeeeeccCcceeeeee
Confidence            44556899999999998753


No 186
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=99.94  E-value=7.6e-26  Score=224.97  Aligned_cols=167  Identities=32%  Similarity=0.581  Sum_probs=144.5

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.|++++.||+|+||.||+|.+ .++..+++|.+...     .......+.+|+.+++.++|+||+++++++..+..+|+
T Consensus        12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~-----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   86 (292)
T cd06644          12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETK-----SEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWI   86 (292)
T ss_pred             hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccC-----CHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEE
Confidence            5689999999999999999998 56889999987642     22335668889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--C
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--D  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~  483 (504)
                      ||||+++++|..++.+  ..+++..+..++.||+.+|.|||++||+|+||||+||+++.++.++|+|||++......  .
T Consensus        87 v~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~  166 (292)
T cd06644          87 MIEFCPGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQR  166 (292)
T ss_pred             EEecCCCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccc
Confidence            9999999999887754  45899999999999999999999999999999999999999999999999998653322  2


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....+++.|+|||++.
T Consensus       167 ~~~~~~~~~y~aPE~~~  183 (292)
T cd06644         167 RDSFIGTPYWMAPEVVM  183 (292)
T ss_pred             cceecCCccccCceeec
Confidence            23446899999999985


No 187
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=99.94  E-value=1.2e-25  Score=226.12  Aligned_cols=172  Identities=30%  Similarity=0.485  Sum_probs=146.6

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|... ++..||+|.+.......  ......+.+|+.+++.++|+||+++++.+.....+|+
T Consensus         1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~--~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l   78 (316)
T cd05574           1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIK--RNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCL   78 (316)
T ss_pred             CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccch--HHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEE
Confidence            36899999999999999999984 68999999886533221  2345678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          408 FLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      ||||+.+++|.+++..   ..+++..+..++.||+.||.|||+.|++|+||||+||||+.++.++|+|||++....... 
T Consensus        79 v~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~  158 (316)
T cd05574          79 VMDYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPP  158 (316)
T ss_pred             EEEecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhccccccc
Confidence            9999999999998875   358899999999999999999999999999999999999999999999999986532211 


Q ss_pred             ------------------------------cccccCCCcccccccccCC
Q 010676          484 ------------------------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ------------------------------~~s~~GT~~YmAPEVL~g~  502 (504)
                                                    .....||..|+|||++.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~  207 (316)
T cd05574         159 PVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGD  207 (316)
T ss_pred             ccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCC
Confidence                                          1123588999999998764


No 188
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.94  E-value=1.1e-27  Score=255.48  Aligned_cols=168  Identities=32%  Similarity=0.572  Sum_probs=145.1

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.|.|+..||.|.||.||+|.++ ++...|-|.+..     .....+..++-||.||..++||+||+|++.|..++.+||
T Consensus        32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIet-----kseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwi  106 (1187)
T KOG0579|consen   32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIET-----KSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWI  106 (1187)
T ss_pred             HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcc-----cchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEE
Confidence            46888889999999999999985 555666676643     335567889999999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--cCC
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--LND  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--~~~  483 (504)
                      ++|||.||-+..++-.  ..+.+.++..+++|+|.||.|||+++|||||||..|||++-+|.++|+|||.+....  ...
T Consensus       107 liEFC~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qk  186 (1187)
T KOG0579|consen  107 LIEFCGGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQK  186 (1187)
T ss_pred             EEeecCCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhh
Confidence            9999999999887754  459999999999999999999999999999999999999999999999999864322  223


Q ss_pred             cccccCCCcccccccccC
Q 010676          484 VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g  501 (504)
                      ..++.|||+||||||+..
T Consensus       187 RDsFIGTPYWMAPEVvmC  204 (1187)
T KOG0579|consen  187 RDSFIGTPYWMAPEVVMC  204 (1187)
T ss_pred             hccccCCcccccchheee
Confidence            467789999999999863


No 189
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=99.94  E-value=1e-25  Score=222.51  Aligned_cols=169  Identities=32%  Similarity=0.521  Sum_probs=140.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC--
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD--  401 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--  401 (504)
                      ..|++.+.||+|+||.||++..     .++..|++|.+....     ......+.+|+.++..++||||+++++++..  
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~   78 (284)
T cd05081           4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHST-----AEHLRDFEREIEILKSLQHDNIVKYKGVCYSAG   78 (284)
T ss_pred             ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCC-----HHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCC
Confidence            3688999999999999999873     468899999875322     2334678899999999999999999987643  


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ...+|+||||+++++|.+++...  .+++..+..++.|++.||.|||++||+|+||||+|||++.++.+||+|||++...
T Consensus        79 ~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~  158 (284)
T cd05081          79 RRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVL  158 (284)
T ss_pred             CCceEEEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccc
Confidence            45689999999999999998653  4889999999999999999999999999999999999999999999999998865


Q ss_pred             ccCCc-----ccccCCCcccccccccCC
Q 010676          480 KLNDV-----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       480 ~~~~~-----~s~~GT~~YmAPEVL~g~  502 (504)
                      .....     ....++..|+|||++.++
T Consensus       159 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~  186 (284)
T cd05081         159 PQDKEYYKVREPGESPIFWYAPESLTES  186 (284)
T ss_pred             cCCCcceeecCCCCCceEeeCHHHhccC
Confidence            43221     111234569999998764


No 190
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the 
Probab=99.94  E-value=8.8e-26  Score=223.75  Aligned_cols=169  Identities=31%  Similarity=0.480  Sum_probs=142.4

Q ss_pred             ccceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .+.|++.+.||+|+||.||+|.+. ++..||+|.+........    ...+.+|+.+++.++|+||+++++++.+.+.+|
T Consensus         4 ~~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~----~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   79 (291)
T cd07844           4 LETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGA----PFTAIREASLLKDLKHANIVTLHDIIHTKKTLT   79 (291)
T ss_pred             ccceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCC----chhHHHHHHHHhhCCCcceeeEEEEEecCCeEE
Confidence            468999999999999999999984 789999998864322111    123568999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          407 IFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      +||||+.+ +|.+++...  .+.+..++.++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++.....  
T Consensus        80 lv~e~~~~-~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~  158 (291)
T cd07844          80 LVFEYLDT-DLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK  158 (291)
T ss_pred             EEEecCCC-CHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc
Confidence            99999985 898887653  4788999999999999999999999999999999999999999999999998754322  


Q ss_pred             CcccccCCCcccccccccC
Q 010676          483 DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g  501 (504)
                      ......++..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~aPE~~~~  177 (291)
T cd07844         159 TYSNEVVTLWYRPPDVLLG  177 (291)
T ss_pred             cccccccccccCCcHHhhc
Confidence            1222347889999998865


No 191
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=99.94  E-value=1e-25  Score=222.31  Aligned_cols=172  Identities=31%  Similarity=0.588  Sum_probs=143.0

Q ss_pred             cccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeec
Q 010676          323 RFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDK  400 (504)
Q Consensus       323 ~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~  400 (504)
                      .+....++|++.+.||+|+||.||++.+ .++..+++|++.....      ....+.+|+.++..+ +|+||+++++++.
T Consensus        12 ~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~------~~~~~~~e~~~l~~l~~h~~i~~~~~~~~   85 (286)
T cd06638          12 SFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIHD------IDEEIEAEYNILKALSDHPNVVKFYGMYY   85 (286)
T ss_pred             cCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeeccccc------hHHHHHHHHHHHHHHhcCCCeeeeeeeee
Confidence            3445678999999999999999999988 5788999997653211      124567899999998 6999999999873


Q ss_pred             -----CCCeEEEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEE
Q 010676          401 -----DESKLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKL  470 (504)
Q Consensus       401 -----~~~~lyLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL  470 (504)
                           ....+|+||||+++++|.+++..     ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.++|
T Consensus        86 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl  165 (286)
T cd06638          86 KKDVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLHVNKTIHRDVKGNNILLTTEGGVKL  165 (286)
T ss_pred             ecccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHHhCCccccCCCHHhEEECCCCCEEE
Confidence                 45679999999999999987642     34788889999999999999999999999999999999999999999


Q ss_pred             EecCcccccccCC--cccccCCCccccccccc
Q 010676          471 ADFGLAKATKLND--VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       471 ~DFGLA~~~~~~~--~~s~~GT~~YmAPEVL~  500 (504)
                      +|||++.......  .....|++.|+|||++.
T Consensus       166 ~dfg~~~~~~~~~~~~~~~~~~~~y~aPE~~~  197 (286)
T cd06638         166 VDFGVSAQLTSTRLRRNTSVGTPFWMAPEVIA  197 (286)
T ss_pred             ccCCceeecccCCCccccccCCCcccChhhhc
Confidence            9999987654322  23346999999999875


No 192
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=99.94  E-value=1.8e-25  Score=216.61  Aligned_cols=170  Identities=29%  Similarity=0.517  Sum_probs=143.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-CCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-ESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-~~~lyL  407 (504)
                      .|++++.||+|+||.||++.+ .++..|++|.+......   ......+.+|+.+++.++|+|++++++.+.. +..+|+
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~l   77 (257)
T cd08223           1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNAS---RRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYI   77 (257)
T ss_pred             CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcC---HHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEE
Confidence            488999999999999999998 46789999988643222   2234567889999999999999999998764 456899


Q ss_pred             EEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          408 FLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      +|||+++++|.+++...   .+++.++..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++......  
T Consensus        78 v~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~  157 (257)
T cd08223          78 VMGFCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCD  157 (257)
T ss_pred             EecccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCC
Confidence            99999999999988652   3889999999999999999999999999999999999999999999999998765322  


Q ss_pred             CcccccCCCcccccccccCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ......+++.|+|||++.++
T Consensus       158 ~~~~~~~~~~y~aPE~~~~~  177 (257)
T cd08223         158 MASTLIGTPYYMSPELFSNK  177 (257)
T ss_pred             ccccccCCcCccChhHhcCC
Confidence            22344689999999998765


No 193
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=99.94  E-value=4.7e-26  Score=224.46  Aligned_cols=167  Identities=37%  Similarity=0.632  Sum_probs=145.5

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||.|+||.||++.+ .++..+++|.+....     ......+.+|+.+++.++|+||+++++++..+..+|+
T Consensus         5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (280)
T cd06611           5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIES-----EEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWI   79 (280)
T ss_pred             hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCC-----HHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEE
Confidence            5689999999999999999998 578999999886432     2334668899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      ||||+++++|..++..  ..+++..+..++.|++.||.|||++||+|+||||+||+++.++.++|+|||++.......  
T Consensus        80 v~e~~~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~  159 (280)
T cd06611          80 LIEFCDGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQK  159 (280)
T ss_pred             EeeccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccc
Confidence            9999999999998865  358999999999999999999999999999999999999999999999999876543221  


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....+|+.|+|||++.
T Consensus       160 ~~~~~~~~~y~~PE~~~  176 (280)
T cd06611         160 RDTFIGTPYWMAPEVVA  176 (280)
T ss_pred             cceeecchhhcCHHHHh
Confidence            23346899999999975


No 194
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=99.94  E-value=9.2e-26  Score=222.96  Aligned_cols=166  Identities=33%  Similarity=0.601  Sum_probs=142.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|++.+.||+|+||.||++.+ .++..+++|.+....     ......+.+|+.+++.++|+||+++++++...+.+|+|
T Consensus         6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v   80 (282)
T cd06643           6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKS-----EEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWIL   80 (282)
T ss_pred             HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCC-----HHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEE
Confidence            478889999999999999998 467888998875322     23346678899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Cc
Q 010676          409 LELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DV  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~  484 (504)
                      |||+.+++|..++..  ..+++..+..++.||+.||.|||+.||+|+||||+|||++.++.+||+|||++......  ..
T Consensus        81 ~e~~~~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~  160 (282)
T cd06643          81 IEFCAGGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRR  160 (282)
T ss_pred             EEecCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccc
Confidence            999999999887754  45899999999999999999999999999999999999999999999999998654322  12


Q ss_pred             ccccCCCccccccccc
Q 010676          485 KSCRGTAFWMAPEVCS  500 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~  500 (504)
                      ....+|+.|+|||++.
T Consensus       161 ~~~~~~~~y~aPE~~~  176 (282)
T cd06643         161 DSFIGTPYWMAPEVVM  176 (282)
T ss_pred             ccccccccccCHhhcc
Confidence            3456899999999984


No 195
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=99.94  E-value=9.3e-26  Score=220.72  Aligned_cols=169  Identities=29%  Similarity=0.451  Sum_probs=143.8

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ...|.+.+.||+|+||.||+|.+ .++..+++|.+...      ......+.+|+.+++.++|+||+++++++..++.++
T Consensus         5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~------~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (263)
T cd05052           5 RTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKED------TMEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFY   78 (263)
T ss_pred             hHHeEEeeecCCcccceEEEEEEecCCceEEEEEecCC------chHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcE
Confidence            34688999999999999999998 56889999987532      122356789999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          407 IFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      ++|||+++++|.+++...   .+++..+..++.|++.||.|||++|++|+||||+|||++.++.+||+|||++.......
T Consensus        79 lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~  158 (263)
T cd05052          79 IITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDT  158 (263)
T ss_pred             EEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccce
Confidence            999999999999988653   47888899999999999999999999999999999999999999999999987654433


Q ss_pred             ccc---ccCCCcccccccccCC
Q 010676          484 VKS---CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s---~~GT~~YmAPEVL~g~  502 (504)
                      ...   ..++..|+|||++.++
T Consensus       159 ~~~~~~~~~~~~y~aPE~~~~~  180 (263)
T cd05052         159 YTAHAGAKFPIKWTAPESLAYN  180 (263)
T ss_pred             eeccCCCCCccccCCHHHhccC
Confidence            221   2246679999988654


No 196
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=99.94  E-value=1.3e-25  Score=220.18  Aligned_cols=172  Identities=41%  Similarity=0.692  Sum_probs=145.5

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccc-----hhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQG-----SQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~-----~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      +|.+.+.||.|+||.||+|.+ .++..+|+|.+......     .......+.+.+|+.+++.++|+||+++++++...+
T Consensus         2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~   81 (272)
T cd06629           2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE   81 (272)
T ss_pred             ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence            588899999999999999987 57899999988542211     112223456788999999999999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .+++||||+.+++|.+++.. ..+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++......
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~  161 (272)
T cd06629          82 YLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFTEQVLEGLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDI  161 (272)
T ss_pred             ceEEEEecCCCCcHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeeecCCChhhEEEcCCCeEEEeecccccccccc
Confidence            99999999999999998876 45888899999999999999999999999999999999999999999999998754321


Q ss_pred             C----cccccCCCcccccccccC
Q 010676          483 D----VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~----~~s~~GT~~YmAPEVL~g  501 (504)
                      .    .....|+..|+|||++.+
T Consensus       162 ~~~~~~~~~~~~~~y~~PE~~~~  184 (272)
T cd06629         162 YDNDQNMSMQGSVFWMAPEVIHS  184 (272)
T ss_pred             ccccccccccCCccccCHHHhcc
Confidence            1    223458899999998765


No 197
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=99.94  E-value=4.1e-26  Score=224.95  Aligned_cols=168  Identities=30%  Similarity=0.506  Sum_probs=141.7

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||+|.+ .+|..|++|.+.......   .....+.+|+.+++.++|+||+++++++.+...+|+|
T Consensus         1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~---~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv   77 (284)
T cd07839           1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDE---GVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLV   77 (284)
T ss_pred             CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccc---cCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEE
Confidence            488899999999999999998 578999999886432211   1224567899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Cc
Q 010676          409 LELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DV  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~  484 (504)
                      +||+.+ +|.+++..  ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++.....  ..
T Consensus        78 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~  156 (284)
T cd07839          78 FEYCDQ-DLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCY  156 (284)
T ss_pred             EecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCc
Confidence            999985 67776653  45899999999999999999999999999999999999999999999999998754432  22


Q ss_pred             ccccCCCcccccccccC
Q 010676          485 KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g  501 (504)
                      ....+++.|+|||++.+
T Consensus       157 ~~~~~~~~y~aPE~~~~  173 (284)
T cd07839         157 SAEVVTLWYRPPDVLFG  173 (284)
T ss_pred             CCCccccCCcChHHHhC
Confidence            33457899999998865


No 198
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=99.94  E-value=6e-27  Score=264.63  Aligned_cols=175  Identities=39%  Similarity=0.634  Sum_probs=147.5

Q ss_pred             ccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-  401 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-  401 (504)
                      +.++..+|+.+++||+||||.||++++ -+|+.||||.+.+..    ......++.+|+.+|.+|+|||||+||..|.+ 
T Consensus       474 ~SRY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~----s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs  549 (1351)
T KOG1035|consen  474 FSRYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKA----SDKLYSKILREVKLLARLNHPNVVRYYSAWVES  549 (1351)
T ss_pred             hhhHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCch----HHHHHHHHHHHHHHHhhcCCcceeeeehhhhcc
Confidence            356788999999999999999999999 599999999887543    23445778899999999999999999842100 


Q ss_pred             --------------------------------------------------------------------------------
Q 010676          402 --------------------------------------------------------------------------------  401 (504)
Q Consensus       402 --------------------------------------------------------------------------------  401 (504)
                                                                                                      
T Consensus       550 ~~~~~~~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~  629 (1351)
T KOG1035|consen  550 TAELTVLEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRN  629 (1351)
T ss_pred             CCccccccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccc
Confidence                                                                                            


Q ss_pred             ------------------------------C--------CeEEEEEEeccCCCHHHHHHhcCCC--hHHHHHHHHHHHHH
Q 010676          402 ------------------------------E--------SKLYIFLELVTKGSLLNLYQRYHLR--DSQVSAYTRQILLG  441 (504)
Q Consensus       402 ------------------------------~--------~~lyLVmEy~~ggsL~~ll~~~~l~--e~~v~~i~~QIl~g  441 (504)
                                                    +        ..+||.||||+..+|.+++..+.+.  ...++++|+||+.|
T Consensus       630 ~S~tS~~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEG  709 (1351)
T KOG1035|consen  630 LSNTSDSEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEG  709 (1351)
T ss_pred             cccccccCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHH
Confidence                                          0        2379999999999999999988875  77899999999999


Q ss_pred             HHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc--------------------cCCcccccCCCcccccccccC
Q 010676          442 LKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK--------------------LNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       442 L~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~--------------------~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      |.|+|++|||||||||.||+++.++.|||+|||+|....                    ....+..+||.-|+|||++.+
T Consensus       710 LaYIH~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~  789 (1351)
T KOG1035|consen  710 LAYIHDQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSD  789 (1351)
T ss_pred             HHHHHhCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcc
Confidence            999999999999999999999999999999999997621                    011234579999999999976


Q ss_pred             C
Q 010676          502 P  502 (504)
Q Consensus       502 ~  502 (504)
                      -
T Consensus       790 ~  790 (1351)
T KOG1035|consen  790 T  790 (1351)
T ss_pred             c
Confidence            3


No 199
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=99.94  E-value=9.5e-26  Score=223.43  Aligned_cols=169  Identities=32%  Similarity=0.517  Sum_probs=142.4

Q ss_pred             ceeeeeeecccCceeEEEEEc-----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--  402 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--  402 (504)
                      .|++.+.||+|+||.||++..     .++..||+|.+.....    ......+.+|+.+++.++|+||+++++++...  
T Consensus         5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (284)
T cd05079           5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESG----GNHIADLKKEIEILRNLYHENIVKYKGICTEDGG   80 (284)
T ss_pred             hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCcccc----HHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCC
Confidence            578899999999999999973     4678999998753321    22345688999999999999999999988765  


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      ..+|+||||+++++|.+++...  .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++....
T Consensus        81 ~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~  160 (284)
T cd05079          81 NGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE  160 (284)
T ss_pred             CceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence            5789999999999999998654  47889999999999999999999999999999999999999999999999987654


Q ss_pred             cCC-----cccccCCCcccccccccCC
Q 010676          481 LND-----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       481 ~~~-----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ...     .....++..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~~~~~y~apE~~~~~  187 (284)
T cd05079         161 TDKEYYTVKDDLDSPVFWYAPECLIQS  187 (284)
T ss_pred             cCccceeecCCCCCCccccCHHHhccC
Confidence            322     1234577789999988754


No 200
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.94  E-value=2.2e-26  Score=245.96  Aligned_cols=146  Identities=27%  Similarity=0.506  Sum_probs=130.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      -|..++.||-|.||.|.++.. .+...||+|.+.+.+.  .....+.++..|-.||...+++-||+||..|.+.+.+|+|
T Consensus       630 mFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDV--l~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFV  707 (1034)
T KOG0608|consen  630 MFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADV--LMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFV  707 (1034)
T ss_pred             ceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHH--HhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEE
Confidence            488899999999999999976 5678999998764433  3345567788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          409 LELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      |+|++||++-.+|-+.+ |.+..+.+|+.++.+|+++.|+.|+|||||||+|||||.+|++||+|||||.
T Consensus       708 MdYIPGGDmMSLLIrmgIFeE~LARFYIAEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCT  777 (1034)
T KOG0608|consen  708 MDYIPGGDMMSLLIRMGIFEEDLARFYIAELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT  777 (1034)
T ss_pred             EeccCCccHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccc
Confidence            99999999998876655 7778888999999999999999999999999999999999999999999985


No 201
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=99.94  E-value=1.1e-25  Score=226.29  Aligned_cols=171  Identities=27%  Similarity=0.482  Sum_probs=138.9

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCc--eEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCC
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGF--FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDES  403 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~--~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~  403 (504)
                      .++|++.+.||+|+||.||+|.+ .++.  .+++|.+...    ........+.+|+.++.++ +|+||+++++++...+
T Consensus         6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~----~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~   81 (303)
T cd05088           6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEY----ASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRG   81 (303)
T ss_pred             hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEeccc----CCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCC
Confidence            35789999999999999999987 3454  3466654321    1223346778899999999 8999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC
Q 010676          404 KLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG  466 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g  466 (504)
                      .+|+||||+++++|.+++...                 .+++.+++.++.||+.||.|||++||+||||||+|||++.++
T Consensus        82 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dlkp~Nili~~~~  161 (303)
T cd05088          82 YLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENY  161 (303)
T ss_pred             CceEEEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHHhCCccccccchheEEecCCC
Confidence            999999999999999988643                 367889999999999999999999999999999999999999


Q ss_pred             cEEEEecCcccccccCCc-ccccCCCcccccccccCC
Q 010676          467 SVKLADFGLAKATKLNDV-KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       467 ~VKL~DFGLA~~~~~~~~-~s~~GT~~YmAPEVL~g~  502 (504)
                      .+||+|||++........ ....++..|+|||++.+.
T Consensus       162 ~~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (303)
T cd05088         162 VAKIADFGLSRGQEVYVKKTMGRLPVRWMAIESLNYS  198 (303)
T ss_pred             cEEeCccccCcccchhhhcccCCCcccccCHHHHhcc
Confidence            999999999864321111 112246679999988654


No 202
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=99.94  E-value=1.2e-25  Score=218.55  Aligned_cols=170  Identities=31%  Similarity=0.467  Sum_probs=145.4

Q ss_pred             cccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ..++|.+.+.||+|+||.||+|.+.++..+++|.+.....      ....+.+|+.+++.++|+||+++++++.....+|
T Consensus         4 ~~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (261)
T cd05034           4 PRESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM------SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIY   77 (261)
T ss_pred             chhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc------CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceE
Confidence            3468999999999999999999988788899998764222      1245788999999999999999999999989999


Q ss_pred             EEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          407 IFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +||||+.+++|.+++...   .+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......
T Consensus        78 ~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~  157 (261)
T cd05034          78 IVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDE  157 (261)
T ss_pred             EEEeccCCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchh
Confidence            999999999999988653   48899999999999999999999999999999999999999999999999987654322


Q ss_pred             cc---cccCCCcccccccccCC
Q 010676          484 VK---SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~---s~~GT~~YmAPEVL~g~  502 (504)
                      ..   ...++..|+|||++.++
T Consensus       158 ~~~~~~~~~~~~y~~PE~~~~~  179 (261)
T cd05034         158 YTAREGAKFPIKWTAPEAANYG  179 (261)
T ss_pred             hhhhhccCCCccccCHHHhccC
Confidence            11   22245689999998764


No 203
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological 
Probab=99.94  E-value=1.2e-25  Score=220.40  Aligned_cols=171  Identities=25%  Similarity=0.368  Sum_probs=142.5

Q ss_pred             ccceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      .++|++.+.||+|+||.||+|...      ++..|++|.+....    .......+.+|+.+++.++|+||+++++++..
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~----~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~   80 (277)
T cd05032           5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENA----SMRERIEFLNEASVMKEFNCHHVVRLLGVVST   80 (277)
T ss_pred             hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCcc----CHHHHHHHHHHHHHHHhCCCCceeEEEEEEcC
Confidence            468999999999999999999863      34689999874322    12223567789999999999999999999999


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhc-----------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEE
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRY-----------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKL  470 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~-----------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL  470 (504)
                      ...+|+||||+++++|.+++...           .+.+..+..++.||+.||.|||+++|+||||||+|||++.++.+||
T Consensus        81 ~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl  160 (277)
T cd05032          81 GQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKI  160 (277)
T ss_pred             CCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccChheEEEcCCCCEEE
Confidence            99999999999999999988642           2567788999999999999999999999999999999999999999


Q ss_pred             EecCcccccccCC----cccccCCCcccccccccCC
Q 010676          471 ADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       471 ~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +|||+++......    .....+|..|+|||++.++
T Consensus       161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (277)
T cd05032         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG  196 (277)
T ss_pred             CCcccchhhccCcccccCCCCCccccccCHHHHhcC
Confidence            9999987654332    1223467889999988654


No 204
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=99.93  E-value=1.8e-25  Score=216.95  Aligned_cols=170  Identities=42%  Similarity=0.750  Sum_probs=147.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||+|.+ .++..|++|.+......   ......+.+|+.+++.++|+||+++++.+...+.+++|
T Consensus         1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv   77 (264)
T cd06626           1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDND---PKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIF   77 (264)
T ss_pred             CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccc---hHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEE
Confidence            588999999999999999987 57899999998754332   34557789999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc---
Q 010676          409 LELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV---  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~---  484 (504)
                      +||+++++|.+++.... +++..+..++.|++.||.|||++||+|+||+|+||+++.++.+||+|||++........   
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~  157 (264)
T cd06626          78 MEYCSGGTLEELLEHGRILDEHVIRVYTLQLLEGLAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMG  157 (264)
T ss_pred             EecCCCCcHHHHHhhcCCCChHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCccc
Confidence            99999999999987653 78888999999999999999999999999999999999999999999999876543221   


Q ss_pred             ---ccccCCCcccccccccCC
Q 010676          485 ---KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ---~s~~GT~~YmAPEVL~g~  502 (504)
                         ....++..|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~~~PE~~~~~  178 (264)
T cd06626         158 EEVQSLAGTPAYMAPEVITGG  178 (264)
T ss_pred             ccccCCcCCcCccChhhccCC
Confidence               124578999999998754


No 205
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=99.93  E-value=1.4e-25  Score=219.54  Aligned_cols=170  Identities=26%  Similarity=0.436  Sum_probs=142.8

Q ss_pred             cceeeeeeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ++|.+.+.||+|+||.||+|.+.    +...|++|.+....    .......+.+|+.+++.++|+||+++++++...+.
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   79 (266)
T cd05033           4 SYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGS----SDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRP   79 (266)
T ss_pred             HHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCC----ChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCc
Confidence            46899999999999999999873    34578999775322    22334568889999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +|++|||+.+++|.+++...  .+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||+++.....
T Consensus        80 ~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~  159 (266)
T cd05033          80 VMIITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDS  159 (266)
T ss_pred             eEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhccccc
Confidence            99999999999999988653  5889999999999999999999999999999999999999999999999998865421


Q ss_pred             --Ccc--cccCCCcccccccccCC
Q 010676          483 --DVK--SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 --~~~--s~~GT~~YmAPEVL~g~  502 (504)
                        ...  ...++..|+|||.+.+.
T Consensus       160 ~~~~~~~~~~~~~~y~~Pe~~~~~  183 (266)
T cd05033         160 EATYTTKGGKIPIRWTAPEAIAYR  183 (266)
T ss_pred             ccceeccCCCCCccccChhhhccC
Confidence              111  12356789999988753


No 206
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=1.3e-25  Score=224.90  Aligned_cols=175  Identities=29%  Similarity=0.471  Sum_probs=143.6

Q ss_pred             ccccccceeeeeeecccCceeEEEEEc--------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeE
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGIS--------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQ  394 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~--------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~  394 (504)
                      +.....+|.+++.||+|+||.||+|..        .++..|++|.+...    ........+.+|+.++..+ +||||++
T Consensus        10 ~~~~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~i~~   85 (304)
T cd05101          10 WEFSRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDD----ATEKDLSDLVSEMEMMKMIGKHKNIIN   85 (304)
T ss_pred             ccccHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccc----cchHHHHHHHHHHHHHHhhccCCCchh
Confidence            334466899999999999999999963        23457899976521    1123346788999999999 7999999


Q ss_pred             EeeeecCCCeEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 010676          395 YYGTDKDESKLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKC  457 (504)
Q Consensus       395 l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP  457 (504)
                      +++++.....+|+||||+.+++|.+++...                 .++...+..++.||+.||.|||++||+||||||
T Consensus        86 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~givH~dlkp  165 (304)
T cd05101          86 LLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLASQKCIHRDLAA  165 (304)
T ss_pred             eeEEEecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHHHCCeeeccccc
Confidence            999999999999999999999999988653                 356778899999999999999999999999999


Q ss_pred             CcEEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          458 ANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       458 ~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +|||++.++.+||+|||+++......    .....+++.|+|||++.++
T Consensus       166 ~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  214 (304)
T cd05101         166 RNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDR  214 (304)
T ss_pred             ceEEEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccC
Confidence            99999999999999999987654322    1122356789999998764


No 207
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=99.93  E-value=1.1e-25  Score=220.63  Aligned_cols=170  Identities=26%  Similarity=0.424  Sum_probs=141.8

Q ss_pred             cceeeeeeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      .+|++.+.||+|+||.||+|.+.    .+..+|+|.+....    .......+.+|+.+++.++||||+++++++..++.
T Consensus         4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   79 (267)
T cd05066           4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKP   79 (267)
T ss_pred             HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCC----CHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCc
Confidence            47899999999999999999863    23478888764321    12234678899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +|+||||+++++|.+++...  .+++.++..++.|++.||.|||++|++|+||||+|||++.++.++|+|||++......
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~  159 (267)
T cd05066          80 VMIVTEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD  159 (267)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence            99999999999999998764  4788899999999999999999999999999999999999999999999998765432


Q ss_pred             Cc-----ccccCCCcccccccccCC
Q 010676          483 DV-----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~-----~s~~GT~~YmAPEVL~g~  502 (504)
                      ..     ....++..|+|||++.++
T Consensus       160 ~~~~~~~~~~~~~~~y~~pe~~~~~  184 (267)
T cd05066         160 PEAAYTTRGGKIPIRWTAPEAIAYR  184 (267)
T ss_pred             cceeeecCCCccceeecCHhHhccC
Confidence            21     111235679999998764


No 208
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=99.93  E-value=1.4e-25  Score=218.78  Aligned_cols=169  Identities=27%  Similarity=0.434  Sum_probs=142.7

Q ss_pred             cccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ..+.|++++.||+|+||.||+|...++..||+|.+.....      ....+.+|+.+++.++|+||+++++++. .+.+|
T Consensus         4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~   76 (260)
T cd05067           4 PRETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM------SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIY   76 (260)
T ss_pred             chHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC------cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcE
Confidence            3468999999999999999999998899999998763222      1246788999999999999999999874 56799


Q ss_pred             EEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          407 IFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      ++|||+.+++|.+++..   ..+++.++..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......
T Consensus        77 ~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05067          77 IITEYMENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNE  156 (260)
T ss_pred             EEEEcCCCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCC
Confidence            99999999999998764   347888999999999999999999999999999999999999999999999987654222


Q ss_pred             c---ccccCCCcccccccccCC
Q 010676          484 V---KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~---~s~~GT~~YmAPEVL~g~  502 (504)
                      .   ....++..|+|||++.+.
T Consensus       157 ~~~~~~~~~~~~y~~pe~~~~~  178 (260)
T cd05067         157 YTAREGAKFPIKWTAPEAINYG  178 (260)
T ss_pred             cccccCCcccccccCHHHhccC
Confidence            1   223456789999988654


No 209
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=99.93  E-value=1.5e-25  Score=250.87  Aligned_cols=171  Identities=28%  Similarity=0.454  Sum_probs=147.9

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ++.|++++.||+|+||.||+|.+ .++..||||++.....  ........+.+|+.++..++|+||+++++++...+.+|
T Consensus         3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~--~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~   80 (669)
T cd05610           3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADM--INKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVY   80 (669)
T ss_pred             cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhc--cCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEE
Confidence            46899999999999999999998 4789999999864332  12334467889999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |||||+.+++|.+++... .+.+..++.|+.||+.||.|||.++||||||||+||||+.++.+||+|||+++......  
T Consensus        81 lVmEy~~g~~L~~li~~~~~l~~~~~~~i~~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGls~~~~~~~~~  160 (669)
T cd05610          81 LVMEYLIGGDVKSLLHIYGYFDEEMAVKYISEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGLSKVTLNRELN  160 (669)
T ss_pred             EEEeCCCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCCCccccCCccc
Confidence            999999999999988754 47888999999999999999999999999999999999999999999999998754332  


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....+|+.|++||...
T Consensus       161 ~~~~~~t~~~~~pe~~~  177 (669)
T cd05610         161 MMDILTTPSMAKPKNDY  177 (669)
T ss_pred             ccccccCccccCccccc
Confidence            33456899999998643


No 210
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=99.93  E-value=1.3e-25  Score=257.00  Aligned_cols=174  Identities=30%  Similarity=0.511  Sum_probs=144.6

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC--
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD--  401 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--  401 (504)
                      ...+.+|++++.||+|+||+||+|.+ .++..||+|++......   ......+.+|+.+|..|+|||||+++++|..  
T Consensus         9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~---e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~   85 (1021)
T PTZ00266          9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLK---EREKSQLVIEVNVMRELKHKNIVRYIDRFLNKA   85 (1021)
T ss_pred             ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccC---HHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecC
Confidence            34567899999999999999999998 57789999988643322   2234668899999999999999999998844  


Q ss_pred             CCeEEEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHC-------CceecCCCCCcEEEcC-----
Q 010676          402 ESKLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQ-------DVVHRDIKCANILVDA-----  464 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~-------gIIHRDLKP~NILLd~-----  464 (504)
                      ...+||||||+.+++|.+++..     ..+++..++.|+.||+.||.|||..       +||||||||+||||+.     
T Consensus        86 ~~~lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~l  165 (1021)
T PTZ00266         86 NQKLYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHI  165 (1021)
T ss_pred             CCEEEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCcccc
Confidence            4679999999999999998865     3589999999999999999999984       4999999999999964     


Q ss_pred             ------------CCcEEEEecCcccccccCC-cccccCCCcccccccccC
Q 010676          465 ------------NGSVKLADFGLAKATKLND-VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       465 ------------~g~VKL~DFGLA~~~~~~~-~~s~~GT~~YmAPEVL~g  501 (504)
                                  .+.+||+|||++....... ...+.||+.|||||++.+
T Consensus       166 g~i~~~~~n~ng~~iVKLsDFGlAr~l~~~s~~~s~vGTp~YmAPEvL~g  215 (1021)
T PTZ00266        166 GKITAQANNLNGRPIAKIGDFGLSKNIGIESMAHSCVGTPYYWSPELLLH  215 (1021)
T ss_pred             ccccccccccCCCCceEEccCCccccccccccccccCCCccccCHHHHhc
Confidence                        2358999999998654332 344579999999999853


No 211
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=99.93  E-value=1.9e-25  Score=221.62  Aligned_cols=169  Identities=31%  Similarity=0.452  Sum_probs=140.3

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .+.|++.+.||+|+||.||+|.+ .++..|++|.+.......    ....+.+|+.+++.++|+||+++++++......|
T Consensus         4 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   79 (291)
T cd07870           4 ATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEG----VPFTAIREASLLKGLKHANIVLLHDIIHTKETLT   79 (291)
T ss_pred             cceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCC----CcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEE
Confidence            36899999999999999999987 578899999886432211    1134568999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          407 IFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      +||||+. ++|.+++..  ..+.+..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||+++.....  
T Consensus        80 lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~  158 (291)
T cd07870          80 FVFEYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQ  158 (291)
T ss_pred             EEEeccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCC
Confidence            9999996 566665543  34788889999999999999999999999999999999999999999999998754322  


Q ss_pred             CcccccCCCcccccccccC
Q 010676          483 DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g  501 (504)
                      ......+++.|+|||++.+
T Consensus       159 ~~~~~~~~~~y~aPE~~~~  177 (291)
T cd07870         159 TYSSEVVTLWYRPPDVLLG  177 (291)
T ss_pred             CCCCccccccccCCceeec
Confidence            1233457899999999865


No 212
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=99.93  E-value=1.5e-25  Score=219.81  Aligned_cols=168  Identities=33%  Similarity=0.469  Sum_probs=140.9

Q ss_pred             ccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ..+|++.+.||+|+||.||+|.+.+...||+|.+.....      ....+.+|+.+++.++|+||+++++.+. ....|+
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~------~~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~l   77 (262)
T cd05071           5 RESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM------SPEAFLQEAQVMKKLRHEKLVQLYAVVS-EEPIYI   77 (262)
T ss_pred             hHHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc------CHHHHHHHHHHHHhCCCCCcceEEEEEC-CCCcEE
Confidence            357999999999999999999987667799998764221      1245788999999999999999999875 456899


Q ss_pred             EEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          408 FLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      ||||+++++|.+++..   ..+++..+..++.|++.||.|||+++|+|+||||.||+++.++.++|+|||++........
T Consensus        78 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~  157 (262)
T cd05071          78 VTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEY  157 (262)
T ss_pred             EEEcCCCCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHCCccccccCcccEEEcCCCcEEeccCCceeecccccc
Confidence            9999999999999875   3478889999999999999999999999999999999999999999999999876543322


Q ss_pred             ---ccccCCCcccccccccCC
Q 010676          485 ---KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ---~s~~GT~~YmAPEVL~g~  502 (504)
                         ....++..|+|||++.++
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~~  178 (262)
T cd05071         158 TARQGAKFPIKWTAPEAALYG  178 (262)
T ss_pred             ccccCCcccceecCHhHhccC
Confidence               123466789999987653


No 213
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.93  E-value=2e-26  Score=244.74  Aligned_cols=181  Identities=29%  Similarity=0.440  Sum_probs=151.5

Q ss_pred             CccccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhH---HHHHHHHHHHHHHhhCC---CCcee
Q 010676          321 NGRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAK---QSISQLEQEIALLSRFE---HENIV  393 (504)
Q Consensus       321 ~~~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~---~~~~~~~~Ei~iL~~L~---HpnIV  393 (504)
                      .+.++. ...|..++.||.|.||.|++|++ .+...|+||.+.+...-...-   ..+-.+-.||.||..++   |+||+
T Consensus       554 e~~~~k-~s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIl  632 (772)
T KOG1152|consen  554 EKEYKK-FSDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENIL  632 (772)
T ss_pred             eeeecc-cccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchh
Confidence            334433 35699999999999999999998 567788888775321110000   00112346999999997   99999


Q ss_pred             EEeeeecCCCeEEEEEEec-cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEE
Q 010676          394 QYYGTDKDESKLYIFLELV-TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLA  471 (504)
Q Consensus       394 ~l~~~~~~~~~lyLVmEy~-~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~  471 (504)
                      +++++|++++++||+||-- +|-+|++++... .+++.+++.||+|++.|+++||+.||||||||-+|+.++.+|.+||+
T Consensus       633 KlLdfFEddd~yyl~te~hg~gIDLFd~IE~kp~m~E~eAk~IFkQV~agi~hlh~~~ivhrdikdenvivd~~g~~kli  712 (772)
T KOG1152|consen  633 KLLDFFEDDDYYYLETEVHGEGIDLFDFIEFKPRMDEPEAKLIFKQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLI  712 (772)
T ss_pred             hhhheeecCCeeEEEecCCCCCcchhhhhhccCccchHHHHHHHHHHHhccccccccCceecccccccEEEecCCeEEEe
Confidence            9999999999999999976 456899999765 59999999999999999999999999999999999999999999999


Q ss_pred             ecCcccccccCCcccccCCCcccccccccCC
Q 010676          472 DFGLAKATKLNDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       472 DFGLA~~~~~~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      |||.+..++.+....++||..|.|||+|.|.
T Consensus       713 dfgsaa~~ksgpfd~f~gtv~~aapevl~g~  743 (772)
T KOG1152|consen  713 DFGSAAYTKSGPFDVFVGTVDYAAPEVLGGE  743 (772)
T ss_pred             eccchhhhcCCCcceeeeeccccchhhhCCC
Confidence            9999998998889999999999999999875


No 214
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=99.93  E-value=3.1e-25  Score=222.57  Aligned_cols=171  Identities=28%  Similarity=0.428  Sum_probs=144.0

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||++.+ .++..|++|.+.....  ........+.+|+.+++.++||||+++++.+..++.+|+|
T Consensus         2 ~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~--~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   79 (305)
T cd05609           2 DFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNL--ILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMV   79 (305)
T ss_pred             CceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhh--hhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEE
Confidence            688999999999999999998 5788999998764321  1223345678999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC----
Q 010676          409 LELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----  483 (504)
                      |||+.+++|.+++... .+++..+..++.|++.||.|||++||+|+||||.|||++.++.++|+|||+++......    
T Consensus        80 ~e~~~g~~L~~~l~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~  159 (305)
T cd05609          80 MEYVEGGDCATLLKNIGALPVDMARMYFAETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNL  159 (305)
T ss_pred             EecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCccccc
Confidence            9999999999998664 47888999999999999999999999999999999999999999999999986421110    


Q ss_pred             -------------cccccCCCcccccccccCC
Q 010676          484 -------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -------------~~s~~GT~~YmAPEVL~g~  502 (504)
                                   .....++..|+|||.+.++
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  191 (305)
T cd05609         160 YEGHIEKDTREFLDKQVCGTPEYIAPEVILRQ  191 (305)
T ss_pred             cccccccchhhccccCCccCccccCchhccCC
Confidence                         0123578899999988654


No 215
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=99.93  E-value=2e-25  Score=221.39  Aligned_cols=167  Identities=30%  Similarity=0.411  Sum_probs=134.9

Q ss_pred             eecccCceeEEEEEc-cCCceEEEEEEeccccchhhH-HHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEecc
Q 010676          336 LLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAK-QSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT  413 (504)
Q Consensus       336 ~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~-~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~  413 (504)
                      +||+|+||.||+|.+ .+++.||+|.+.......... .........+.++....||||+.+++++...+.+|+||||+.
T Consensus         1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~   80 (278)
T cd05606           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN   80 (278)
T ss_pred             CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence            489999999999988 578999999886432221111 111111223345555689999999999999999999999999


Q ss_pred             CCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcccccCCCc
Q 010676          414 KGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF  492 (504)
Q Consensus       414 ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~GT~~  492 (504)
                      +++|..++... .+++..+..|+.|++.||.|||+++|+|+||||+||+++.++.++|+|||++............||..
T Consensus        81 g~~L~~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  160 (278)
T cd05606          81 GGDLHYHLSQHGVFSEAEMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHG  160 (278)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCCCcC
Confidence            99999888654 48999999999999999999999999999999999999999999999999987654444445579999


Q ss_pred             ccccccccCC
Q 010676          493 WMAPEVCSNP  502 (504)
Q Consensus       493 YmAPEVL~g~  502 (504)
                      |+|||++.++
T Consensus       161 y~aPE~~~~~  170 (278)
T cd05606         161 YMAPEVLQKG  170 (278)
T ss_pred             CcCcHHhcCC
Confidence            9999998643


No 216
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=99.93  E-value=1.3e-25  Score=219.00  Aligned_cols=169  Identities=29%  Similarity=0.447  Sum_probs=142.0

Q ss_pred             cccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ..++|++.+.||+|+||.||+|...++..+|+|.+......      ...+.+|+.++++++|+||+++++++. ....|
T Consensus         4 ~~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~~------~~~~~~E~~~l~~l~~~~i~~~~~~~~-~~~~~   76 (260)
T cd05070           4 PRESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTMS------PESFLEEAQIMKKLRHDKLVQLYAVVS-EEPIY   76 (260)
T ss_pred             chHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCCC------HHHHHHHHHHHHhcCCCceEEEEeEEC-CCCcE
Confidence            34679999999999999999999888888999988643221      245789999999999999999999875 45689


Q ss_pred             EEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          407 IFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      ++|||+.+++|.+++...   .+++..+..++.|++.||.|||+++|+|+||||+|||++.++.++|+|||++.......
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~  156 (260)
T cd05070          77 IVTEYMSKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNE  156 (260)
T ss_pred             EEEEecCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcc
Confidence            999999999999988653   38889999999999999999999999999999999999999999999999987654332


Q ss_pred             c---ccccCCCcccccccccCC
Q 010676          484 V---KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~---~s~~GT~~YmAPEVL~g~  502 (504)
                      .   ....++..|+|||++.++
T Consensus       157 ~~~~~~~~~~~~y~aPE~~~~~  178 (260)
T cd05070         157 YTARQGAKFPIKWTAPEAALYG  178 (260)
T ss_pred             cccccCCCCCccccChHHHhcC
Confidence            2   122356679999987643


No 217
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=99.93  E-value=1.7e-25  Score=222.41  Aligned_cols=171  Identities=25%  Similarity=0.362  Sum_probs=139.8

Q ss_pred             ccceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      .++|++.+.||+|+||.||+|...      .+..||+|.+.....    ......+.+|+.+++.++|+||+++++++..
T Consensus         5 ~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~   80 (288)
T cd05061           5 REKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESAS----LRERIEFLNEASVMKGFTCHHVVRLLGVVSK   80 (288)
T ss_pred             HHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCC----HHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC
Confidence            468999999999999999998652      355899997653221    1223457789999999999999999999999


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhcC-----------CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEE
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRYH-----------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKL  470 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~~-----------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL  470 (504)
                      .+..|+||||+.+|+|.+++....           +....+..++.||+.||.|||+++|+||||||+|||++.++.++|
T Consensus        81 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L  160 (288)
T cd05061          81 GQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKI  160 (288)
T ss_pred             CCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEE
Confidence            999999999999999999986532           345678889999999999999999999999999999999999999


Q ss_pred             EecCcccccccCCc----ccccCCCcccccccccCC
Q 010676          471 ADFGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       471 ~DFGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      +|||+++.......    ....++..|+|||.+.++
T Consensus       161 ~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~  196 (288)
T cd05061         161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDG  196 (288)
T ss_pred             CcCCccccccccccccccCCCcccccccCHHHhccC
Confidence            99999875432221    122356789999998754


No 218
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation, 
Probab=99.93  E-value=2.2e-25  Score=221.09  Aligned_cols=174  Identities=27%  Similarity=0.461  Sum_probs=143.5

Q ss_pred             cccccceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEee
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYG  397 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~  397 (504)
                      ....++|++.+.||+|+||.||++...      ....+|+|.+....    .......+.+|+.++..+ +|+||+++++
T Consensus         8 ~~~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~i~~~~~   83 (293)
T cd05053           8 ELPRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDA----TEKDLSDLVSEMEMMKMIGKHKNIINLLG   83 (293)
T ss_pred             ccCHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCC----CHHHHHHHHHHHHHHHhhcCCCCeeeEEE
Confidence            334568999999999999999999863      33688999775321    122345688999999999 7999999999


Q ss_pred             eecCCCeEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 010676          398 TDKDESKLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANI  460 (504)
Q Consensus       398 ~~~~~~~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NI  460 (504)
                      ++.....+|++|||+.+++|..++...                 .+++..+..++.||+.||.|||++||+|+||||+||
T Consensus        84 ~~~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~Ni  163 (293)
T cd05053          84 VCTQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLASKKCIHRDLAARNV  163 (293)
T ss_pred             EEcCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHCCccccccceeeE
Confidence            999999999999999999999988642                 378888999999999999999999999999999999


Q ss_pred             EEcCCCcEEEEecCcccccccCCc----ccccCCCcccccccccCC
Q 010676          461 LVDANGSVKLADFGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       461 LLd~~g~VKL~DFGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      |++.++.+||+|||+++.......    ....++..|+|||++.+.
T Consensus       164 l~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  209 (293)
T cd05053         164 LVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDR  209 (293)
T ss_pred             EEcCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccC
Confidence            999999999999999886543321    122356789999987654


No 219
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=99.93  E-value=5.9e-26  Score=224.12  Aligned_cols=170  Identities=25%  Similarity=0.347  Sum_probs=141.3

Q ss_pred             cceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      ..|++.+.||+|+||.||+|.+.      .+..||+|.+.....    ......+.+|+.++..++||||+++++++...
T Consensus         5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~   80 (283)
T cd05091           5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAE----GPLREEFKHEAMMRSRLQHPNIVCLLGVVTKE   80 (283)
T ss_pred             HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCC----HHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCC
Confidence            46888899999999999999863      357899998763221    22345688999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHh-----------------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC
Q 010676          403 SKLYIFLELVTKGSLLNLYQR-----------------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN  465 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~-----------------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~  465 (504)
                      ..+++++||+.+++|.+++..                 ..+++..+..++.|++.||.|||++||+||||||.|||++.+
T Consensus        81 ~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~  160 (283)
T cd05091          81 QPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLSSHHVVHKDLATRNVLVFDK  160 (283)
T ss_pred             CceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHHHcCccccccchhheEecCC
Confidence            999999999999999998742                 236778889999999999999999999999999999999999


Q ss_pred             CcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          466 GSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       466 g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +.+||+|||+++......    .....+++.|||||++.++
T Consensus       161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  201 (283)
T cd05091         161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYG  201 (283)
T ss_pred             CceEecccccccccccchheeeccCccCCccccCHHHHhcC
Confidence            999999999987643322    1233467889999988643


No 220
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=2e-25  Score=225.09  Aligned_cols=173  Identities=29%  Similarity=0.464  Sum_probs=141.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc--------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS--------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYY  396 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~--------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~  396 (504)
                      ....+|.+++.||+|+||.||+|..        .....+|+|.+....    .......+.+|+.+++.+ +||||++++
T Consensus         9 ~~~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~   84 (314)
T cd05099           9 FPRDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNA----TDKDLADLISEMELMKLIGKHKNIINLL   84 (314)
T ss_pred             ccHHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCC----ChHHHHHHHHHHHHHHhccCCCCeeeEE
Confidence            3346899999999999999999974        234578999765321    123345688899999999 599999999


Q ss_pred             eeecCCCeEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCc
Q 010676          397 GTDKDESKLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCAN  459 (504)
Q Consensus       397 ~~~~~~~~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~N  459 (504)
                      +++...+.+|++|||+.+++|.+++...                 .+++.++..++.||+.||.|||++||+|+||||+|
T Consensus        85 ~~~~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~gi~H~dlkp~N  164 (314)
T cd05099          85 GVCTQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLESRRCIHRDLAARN  164 (314)
T ss_pred             EEEccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHHHCCeeecccccee
Confidence            9999999999999999999999988652                 37788899999999999999999999999999999


Q ss_pred             EEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          460 ILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       460 ILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||++.++.+||+|||+++......    .....++..|||||++.++
T Consensus       165 ill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  211 (314)
T cd05099         165 VLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDR  211 (314)
T ss_pred             EEEcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccC
Confidence            999999999999999997654221    1112245679999998765


No 221
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=99.93  E-value=1.4e-25  Score=220.49  Aligned_cols=170  Identities=38%  Similarity=0.663  Sum_probs=148.9

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||.|+||.||+|.+ .++..|++|.+.....    ......+.+|+.+++.++|+||+++++++..+..+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   76 (274)
T cd06609           1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEA----EDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWI   76 (274)
T ss_pred             ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeecccc----chHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEE
Confidence            3688899999999999999998 5789999998864321    2233567899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Ccc
Q 010676          408 FLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~  485 (504)
                      |+||+.+++|.+++....+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||+++.....  ...
T Consensus        77 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~  156 (274)
T cd06609          77 IMEYCGGGSCLDLLKPGKLDETYIAFILREVLLGLEYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRN  156 (274)
T ss_pred             EEEeeCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccc
Confidence            999999999999998888999999999999999999999999999999999999999999999999998765433  223


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...+++.|+|||++.+.
T Consensus       157 ~~~~~~~y~~PE~~~~~  173 (274)
T cd06609         157 TFVGTPFWMAPEVIKQS  173 (274)
T ss_pred             cccCCccccChhhhccC
Confidence            45688999999998764


No 222
>PHA02988 hypothetical protein; Provisional
Probab=99.93  E-value=1.4e-25  Score=224.12  Aligned_cols=163  Identities=21%  Similarity=0.249  Sum_probs=138.5

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC----CCeEEEEEE
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD----ESKLYIFLE  410 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~----~~~lyLVmE  410 (504)
                      ..||+|+++.||+|.. +|..||+|.+.....  ........+.+|+.+|.+++||||+++++++.+    ...+++|||
T Consensus        26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~--~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~E  102 (283)
T PHA02988         26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHK--GHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILE  102 (283)
T ss_pred             eEEeeCCceEEEEEEE-CCEEEEEEecccccc--ccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEE
Confidence            5699999999999988 688999998864322  223335678899999999999999999998866    457899999


Q ss_pred             eccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccccc
Q 010676          411 LVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCR  488 (504)
Q Consensus       411 y~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~  488 (504)
                      |+.+|+|.+++... .+++.....++.|++.||.|||+ .+++||||||+|||++.++.+||+|||+++...... ....
T Consensus       103 y~~~g~L~~~l~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~-~~~~  181 (283)
T PHA02988        103 YCTRGYLREVLDKEKDLSFKTKLDMAIDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP-FKNV  181 (283)
T ss_pred             eCCCCcHHHHHhhCCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc-cccc
Confidence            99999999998654 58888999999999999999998 499999999999999999999999999987654332 2345


Q ss_pred             CCCcccccccccC
Q 010676          489 GTAFWMAPEVCSN  501 (504)
Q Consensus       489 GT~~YmAPEVL~g  501 (504)
                      ||..|+|||++.+
T Consensus       182 ~~~~y~aPE~~~~  194 (283)
T PHA02988        182 NFMVYFSYKMLND  194 (283)
T ss_pred             CcccccCHHHhhh
Confidence            8999999999875


No 223
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=99.93  E-value=2.6e-25  Score=220.96  Aligned_cols=164  Identities=31%  Similarity=0.422  Sum_probs=133.6

Q ss_pred             eecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHH---HHhhCCCCceeEEeeeecCCCeEEEEEEe
Q 010676          336 LLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIA---LLSRFEHENIVQYYGTDKDESKLYIFLEL  411 (504)
Q Consensus       336 ~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~---iL~~L~HpnIV~l~~~~~~~~~lyLVmEy  411 (504)
                      +||+|+||.||++.+ .++..+|+|.+..........  ...+.+|..   ++....|+||+.+++++...+.+|+||||
T Consensus         1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~   78 (279)
T cd05633           1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQG--ETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDL   78 (279)
T ss_pred             CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchH--HHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEec
Confidence            489999999999998 578999999886433222111  122233333   34445799999999999999999999999


Q ss_pred             ccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcccccCC
Q 010676          412 VTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGT  490 (504)
Q Consensus       412 ~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~GT  490 (504)
                      +.+++|..++.. ..+++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|||++............||
T Consensus        79 ~~~~~L~~~i~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  158 (279)
T cd05633          79 MNGGDLHYHLSQHGVFSEKEMRFYATEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT  158 (279)
T ss_pred             CCCCCHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcCCC
Confidence            999999988765 4589999999999999999999999999999999999999999999999999875544444445699


Q ss_pred             CcccccccccC
Q 010676          491 AFWMAPEVCSN  501 (504)
Q Consensus       491 ~~YmAPEVL~g  501 (504)
                      ..|||||++.+
T Consensus       159 ~~y~aPE~~~~  169 (279)
T cd05633         159 HGYMAPEVLQK  169 (279)
T ss_pred             cCccCHHHhcC
Confidence            99999998863


No 224
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=99.93  E-value=1.2e-25  Score=230.54  Aligned_cols=171  Identities=29%  Similarity=0.420  Sum_probs=138.3

Q ss_pred             ccceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeec
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDK  400 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~  400 (504)
                      .++|++++.||+|+||.||+|.+      .+++.||||.+.....    ......+.+|+.+|..+ +|+||+++++++.
T Consensus         6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~   81 (343)
T cd05103           6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGAT----HSEHRALMSELKILIHIGHHLNVVNLLGACT   81 (343)
T ss_pred             hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCC----hHHHHHHHHHHHHHHhccCCccHhhhcceee
Confidence            35799999999999999999974      3578999998863221    22345678999999999 6899999999775


Q ss_pred             C-CCeEEEEEEeccCCCHHHHHHhc-------------------------------------------------------
Q 010676          401 D-ESKLYIFLELVTKGSLLNLYQRY-------------------------------------------------------  424 (504)
Q Consensus       401 ~-~~~lyLVmEy~~ggsL~~ll~~~-------------------------------------------------------  424 (504)
                      . ...+|+||||+++|+|.+++...                                                       
T Consensus        82 ~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  161 (343)
T cd05103          82 KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDV  161 (343)
T ss_pred             cCCCceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccc
Confidence            4 45689999999999999987542                                                       


Q ss_pred             -------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC----cccc
Q 010676          425 -------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSC  487 (504)
Q Consensus       425 -------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~  487 (504)
                                   .+++..+..++.||+.||.|||++||+||||||.|||++.++.+||+|||++.......    ....
T Consensus       162 ~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  241 (343)
T cd05103         162 EEEEAEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA  241 (343)
T ss_pred             hhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence                         25667788899999999999999999999999999999999999999999987643221    1123


Q ss_pred             cCCCcccccccccCC
Q 010676          488 RGTAFWMAPEVCSNP  502 (504)
Q Consensus       488 ~GT~~YmAPEVL~g~  502 (504)
                      .++..|+|||++.++
T Consensus       242 ~~~~~y~aPE~~~~~  256 (343)
T cd05103         242 RLPLKWMAPETIFDR  256 (343)
T ss_pred             CCCcceECcHHhcCC
Confidence            356789999987654


No 225
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=99.93  E-value=2.2e-25  Score=220.09  Aligned_cols=169  Identities=38%  Similarity=0.688  Sum_probs=146.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      -|++.+.||.|+||.||+|.+ .++..||+|.+.....    ......+.+|+.++..++|+||+++++++..+..+|+|
T Consensus         5 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv   80 (277)
T cd06641           5 LFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWII   80 (277)
T ss_pred             hhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccc----hHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEE
Confidence            477888999999999999987 5788999998753221    22345788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--ccc
Q 010676          409 LELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~s  486 (504)
                      |||+.+++|..++....+++..+..++.|++.+|.|||++|++|+||||.||+++.++.++|+|||++.......  ...
T Consensus        81 ~e~~~~~~l~~~i~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~  160 (277)
T cd06641          81 MEYLGGGSALDLLEPGPLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNT  160 (277)
T ss_pred             EEeCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhcc
Confidence            999999999999988889999999999999999999999999999999999999999999999999987654332  223


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..++..|+|||++.+.
T Consensus       161 ~~~~~~y~~PE~~~~~  176 (277)
T cd06641         161 FVGTPFWMAPEVIKQS  176 (277)
T ss_pred             ccCCccccChhhhccC
Confidence            4588999999998654


No 226
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25 
Probab=99.93  E-value=6.5e-26  Score=223.48  Aligned_cols=170  Identities=39%  Similarity=0.673  Sum_probs=147.3

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.|++.+.||+|+||.||+|.+ .++..||+|.+.....    ......+.+|+.+++.++|+||+++++++...+.+|+
T Consensus         4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (277)
T cd06642           4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWI   79 (277)
T ss_pred             HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccc----hHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEE
Confidence            3577788999999999999987 5688999998753321    2234678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--cc
Q 010676          408 FLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~  485 (504)
                      ||||+++++|.+++....+++..+..++.||+.||.|||++|++|+||+|+||+++.++.++|+|||++.......  ..
T Consensus        80 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06642          80 IMEYLGGGSALDLLKPGPLEETYIATILREILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             EEEccCCCcHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhh
Confidence            9999999999999988889999999999999999999999999999999999999999999999999987654332  22


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...|+..|+|||++.+.
T Consensus       160 ~~~~~~~y~aPE~~~~~  176 (277)
T cd06642         160 TFVGTPFWMAPEVIKQS  176 (277)
T ss_pred             cccCcccccCHHHhCcC
Confidence            34588999999998764


No 227
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=99.93  E-value=9.5e-26  Score=223.43  Aligned_cols=170  Identities=27%  Similarity=0.406  Sum_probs=146.6

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||+||++.+ .++..||+|++.....    ......+.+|+.+++.++||||+++++++...+.+|+
T Consensus         5 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~l   80 (284)
T cd06620           5 EDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAK----SSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICM   80 (284)
T ss_pred             HHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCc----chHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEE
Confidence            5788999999999999999998 5788999998764321    2234568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      ||||+++++|..++... .+++..+..++.|++.+|.|||+ .+++|+||||+||+++.++.++|+|||++.........
T Consensus        81 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~  160 (284)
T cd06620          81 CMEFMDCGSLDRIYKKGGPIPVEILGKIAVAVVEGLTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIAD  160 (284)
T ss_pred             EEecCCCCCHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccC
Confidence            99999999999988764 48899999999999999999997 68999999999999999999999999998755433334


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...||..|+|||++.++
T Consensus       161 ~~~~~~~~~aPE~~~~~  177 (284)
T cd06620         161 TFVGTSTYMSPERIQGG  177 (284)
T ss_pred             ccccCcccCCHHHHccC
Confidence            55799999999988653


No 228
>PHA03210 serine/threonine kinase US3; Provisional
Probab=99.93  E-value=8.9e-26  Score=244.68  Aligned_cols=176  Identities=26%  Similarity=0.349  Sum_probs=135.1

Q ss_pred             ccccceeeeeeecccCceeEEEEEcc--CCceEEEEEEec------------cccchhhHHHHHHHHHHHHHHhhCCCCc
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGISD--DGFFFAVKEVSL------------LDQGSQAKQSISQLEQEIALLSRFEHEN  391 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~~--~g~~vAVK~v~~------------~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn  391 (504)
                      .+.++|++++.||+|+||+||++...  ++...++|.+..            .............+++|+.+|..++|+|
T Consensus       145 ~~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~Hpn  224 (501)
T PHA03210        145 EFLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHEN  224 (501)
T ss_pred             hhhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCC
Confidence            45678999999999999999998652  222222221100            0000111223456789999999999999


Q ss_pred             eeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcC------CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC
Q 010676          392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN  465 (504)
Q Consensus       392 IV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~  465 (504)
                      ||++++++...+..|+||+++.+ +|..++....      .....+..|+.||+.||.|||++|||||||||+||||+.+
T Consensus       225 Iv~l~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH~~gIiHrDLKP~NILl~~~  303 (501)
T PHA03210        225 ILKIEEILRSEANTYMITQKYDF-DLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIHDKKLIHRDIKLENIFLNCD  303 (501)
T ss_pred             cCcEeEEEEECCeeEEEEecccc-CHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCC
Confidence            99999999999999999999965 6666554332      2345678899999999999999999999999999999999


Q ss_pred             CcEEEEecCcccccccCC---cccccCCCcccccccccCC
Q 010676          466 GSVKLADFGLAKATKLND---VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       466 g~VKL~DFGLA~~~~~~~---~~s~~GT~~YmAPEVL~g~  502 (504)
                      +.+||+|||+++.+....   .....||+.|+|||++.+.
T Consensus       304 ~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y~aPE~~~~~  343 (501)
T PHA03210        304 GKIVLGDFGTAMPFEKEREAFDYGWVGTVATNSPEILAGD  343 (501)
T ss_pred             CCEEEEeCCCceecCcccccccccccCCcCCCCchhhcCC
Confidence            999999999998654332   2235699999999998764


No 229
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=99.93  E-value=1.9e-25  Score=220.45  Aligned_cols=170  Identities=37%  Similarity=0.663  Sum_probs=148.2

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ..|+..+.||.|+||.||+|.+ .++..||+|.+.....    ......+.+|+.+++.+.|+||+++++++.....+|+
T Consensus         4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   79 (277)
T cd06640           4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEA----EDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWI   79 (277)
T ss_pred             HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEecccc----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEE
Confidence            4578889999999999999998 5688999998864321    2334678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--cc
Q 010676          408 FLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~  485 (504)
                      ||||+++++|.+++....+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......  ..
T Consensus        80 v~e~~~~~~L~~~i~~~~l~~~~~~~~~~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~  159 (277)
T cd06640          80 IMEYLGGGSALDLLRAGPFDEFQIATMLKEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN  159 (277)
T ss_pred             EEecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccc
Confidence            9999999999999988889999999999999999999999999999999999999999999999999987654332  22


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...++..|+|||++.++
T Consensus       160 ~~~~~~~y~apE~~~~~  176 (277)
T cd06640         160 TFVGTPFWMAPEVIQQS  176 (277)
T ss_pred             cccCcccccCHhHhccC
Confidence            34588899999998664


No 230
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=99.93  E-value=1.5e-25  Score=224.64  Aligned_cols=160  Identities=31%  Similarity=0.464  Sum_probs=130.0

Q ss_pred             eeeecccCceeEEEEEcc---CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeec--CCCeEEEE
Q 010676          334 GDLLGRGSFGSVYEGISD---DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDK--DESKLYIF  408 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~---~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~--~~~~lyLV  408 (504)
                      +..||+|+||.||+|...   ++..||+|.+.....       ...+.+|+.+++.++||||+++++++.  .+..+|+|
T Consensus         6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~~-------~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv   78 (317)
T cd07867           6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTGI-------SMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLL   78 (317)
T ss_pred             ceEeccCCCeeEEEEEecCCCccceEEEEEecCCCC-------cHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEE
Confidence            467999999999999863   567899998753211       134678999999999999999999874  45678999


Q ss_pred             EEeccCCCHHHHHHh----------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE----cCCCcEEEEecC
Q 010676          409 LELVTKGSLLNLYQR----------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILV----DANGSVKLADFG  474 (504)
Q Consensus       409 mEy~~ggsL~~ll~~----------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILL----d~~g~VKL~DFG  474 (504)
                      |||+.+ +|.+++..          ..+++..+..++.||+.||.|||++||+||||||+|||+    +.++.+||+|||
T Consensus        79 ~e~~~~-~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG  157 (317)
T cd07867          79 FDYAEH-DLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMG  157 (317)
T ss_pred             EeeeCC-cHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeecc
Confidence            999976 67666532          137788899999999999999999999999999999999    566799999999


Q ss_pred             cccccccCC-----cccccCCCcccccccccC
Q 010676          475 LAKATKLND-----VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       475 LA~~~~~~~-----~~s~~GT~~YmAPEVL~g  501 (504)
                      +++......     .....||+.|+|||++.+
T Consensus       158 ~a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~  189 (317)
T cd07867         158 FARLFNSPLKPLADLDPVVVTFWYRAPELLLG  189 (317)
T ss_pred             ceeccCCCcccccccCcceecccccCcHHhcC
Confidence            997654321     234568999999999865


No 231
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=99.93  E-value=1.5e-25  Score=219.36  Aligned_cols=167  Identities=34%  Similarity=0.641  Sum_probs=140.8

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecC----
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKD----  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~----  401 (504)
                      .+.|++.+.||+|+||.||+|.. .++..||+|.+.....      ....+.+|+.++..+ +|+||+++++++..    
T Consensus         5 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   78 (272)
T cd06637           5 AGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD------EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPP   78 (272)
T ss_pred             hhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc------cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCC
Confidence            35688889999999999999987 5788999998864321      124567899999988 69999999998864    


Q ss_pred             --CCeEEEEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          402 --ESKLYIFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       402 --~~~lyLVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                        ...+|++|||+.+++|.+++...   .+++..+..++.|++.||.|||+++|+|+||||+||+++.++.++|+|||++
T Consensus        79 ~~~~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~  158 (272)
T cd06637          79 GMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVS  158 (272)
T ss_pred             CCCcEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCc
Confidence              34689999999999999988753   4788999999999999999999999999999999999999999999999998


Q ss_pred             cccccC--CcccccCCCccccccccc
Q 010676          477 KATKLN--DVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       477 ~~~~~~--~~~s~~GT~~YmAPEVL~  500 (504)
                      ......  ......|++.|+|||++.
T Consensus       159 ~~~~~~~~~~~~~~g~~~y~aPE~~~  184 (272)
T cd06637         159 AQLDRTVGRRNTFIGTPYWMAPEVIA  184 (272)
T ss_pred             eecccccccCCcccccccccCHhHhc
Confidence            754322  233456899999999985


No 232
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=99.93  E-value=2.4e-25  Score=221.66  Aligned_cols=169  Identities=31%  Similarity=0.435  Sum_probs=141.9

Q ss_pred             cceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      .+|.+.+.||+|+||.||+|..      .++..+++|.+....     ......+.+|+.+++.++|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (291)
T cd05094           5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPT-----LAARKDFQREAELLTNLQHEHIVKFYGVCGDG   79 (291)
T ss_pred             HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCcc-----HHHHHHHHHHHHHHhcCCCCCcceEEEEEccC
Confidence            4689999999999999999974      245568888764321     22335688999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN  465 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~  465 (504)
                      +.+++||||+++++|.+++...                 .+++..+..++.||+.||.|||++||+||||||+|||++.+
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH~~~i~H~dlkp~Nil~~~~  159 (291)
T cd05094          80 DPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLATRNCLVGAN  159 (291)
T ss_pred             CceEEEEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccCcceEEEccC
Confidence            9999999999999999998653                 26888999999999999999999999999999999999999


Q ss_pred             CcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          466 GSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       466 g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +.++|+|||++.......    .....++..|||||++.+.
T Consensus       160 ~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  200 (291)
T cd05094         160 LLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYR  200 (291)
T ss_pred             CcEEECCCCcccccCCCceeecCCCCCcceeecChHHhccC
Confidence            999999999987543322    1234467889999988754


No 233
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=99.93  E-value=1.8e-25  Score=222.17  Aligned_cols=169  Identities=27%  Similarity=0.430  Sum_probs=139.2

Q ss_pred             ceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      +|++.+.||+|+||.||+|.+.      ....+++|.+....    .......+.+|+.+++.++||||+++++.+...+
T Consensus         1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~   76 (290)
T cd05045           1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENA----SSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDG   76 (290)
T ss_pred             CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCC----CHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCC
Confidence            4788899999999999999862      23467888764321    1223467889999999999999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHhc-------------------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCC
Q 010676          404 KLYIFLELVTKGSLLNLYQRY-------------------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCA  458 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~-------------------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~  458 (504)
                      ..|++|||+.+++|.+++...                         .+++..+..++.|++.||.|||+++|+||||||+
T Consensus        77 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~ivH~dikp~  156 (290)
T cd05045          77 PLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLAEMKLVHRDLAAR  156 (290)
T ss_pred             CcEEEEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHHHCCeehhhhhhh
Confidence            999999999999999987642                         3677888999999999999999999999999999


Q ss_pred             cEEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          459 NILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       459 NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      |||++.++.+||+|||+++......    .....++..|+|||++.+.
T Consensus       157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~  204 (290)
T cd05045         157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDH  204 (290)
T ss_pred             eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccC
Confidence            9999999999999999987543221    1223457789999987654


No 234
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=99.93  E-value=1.2e-25  Score=217.75  Aligned_cols=159  Identities=25%  Similarity=0.356  Sum_probs=132.4

Q ss_pred             eeecccCceeEEEEEccCCc-----------eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          335 DLLGRGSFGSVYEGISDDGF-----------FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~-----------~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      +.||+|+||.||+|.+....           .+++|.+.....      ....+.+|+.+++.++|+||+++++++.. .
T Consensus         1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~------~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~   73 (259)
T cd05037           1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHR------DSLAFFETASLMSQLSHKHLVKLYGVCVR-D   73 (259)
T ss_pred             CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchh------hHHHHHHHHHHHHcCCCcchhheeeEEec-C
Confidence            46999999999999985322           466665542211      14677899999999999999999999887 7


Q ss_pred             eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-------cEEEEecC
Q 010676          404 KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-------SVKLADFG  474 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-------~VKL~DFG  474 (504)
                      ..|+||||+.+++|.+++...  .++...+..++.||+.||.|||++||+||||||+|||++.++       .+||+|||
T Consensus        74 ~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg  153 (259)
T cd05037          74 ENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPG  153 (259)
T ss_pred             CcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHhhCCeecccCccceEEEecCccccCCceeEEeCCCC
Confidence            789999999999999998754  488899999999999999999999999999999999999887       79999999


Q ss_pred             cccccccCCcccccCCCcccccccccCC
Q 010676          475 LAKATKLNDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       475 LA~~~~~~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ++.....  .....++..|+|||++.+.
T Consensus       154 ~a~~~~~--~~~~~~~~~y~aPE~~~~~  179 (259)
T cd05037         154 IPITVLS--REERVERIPWIAPECIRNG  179 (259)
T ss_pred             ccccccc--ccccccCCCccChhhhcCC
Confidence            9876543  2234577889999998764


No 235
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=99.93  E-value=3e-25  Score=216.77  Aligned_cols=170  Identities=26%  Similarity=0.419  Sum_probs=143.1

Q ss_pred             ccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ...++|++.+.||+|+||.||++....+..+++|.+...      ......+.+|+.+++.++|+||+++++.+.. ...
T Consensus         3 ~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~------~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~   75 (260)
T cd05073           3 IPRESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPG------SMSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPI   75 (260)
T ss_pred             ccccceeEEeEecCccceEEEEEEecCCccEEEEecCCC------hhHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCe
Confidence            345789999999999999999999877788999977532      1224568889999999999999999999887 788


Q ss_pred             EEEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          406 YIFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      |++|||+++++|.+++...   .++...+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++......
T Consensus        76 ~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~  155 (260)
T cd05073          76 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDN  155 (260)
T ss_pred             EEEEEeCCCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCC
Confidence            9999999999999998653   3677888999999999999999999999999999999999999999999998765432


Q ss_pred             Ccc---cccCCCcccccccccCC
Q 010676          483 DVK---SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~---s~~GT~~YmAPEVL~g~  502 (504)
                      ...   ...++..|+|||++.++
T Consensus       156 ~~~~~~~~~~~~~y~~PE~~~~~  178 (260)
T cd05073         156 EYTAREGAKFPIKWTAPEAINFG  178 (260)
T ss_pred             CcccccCCcccccccCHhHhccC
Confidence            211   22356779999998764


No 236
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=99.93  E-value=1.4e-25  Score=248.16  Aligned_cols=168  Identities=24%  Similarity=0.412  Sum_probs=140.1

Q ss_pred             ccceeeeeeecccCceeEEEEEccCC-ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeee-c---C
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDG-FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTD-K---D  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g-~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~-~---~  401 (504)
                      ..++++.++|.+|||+.||+|.+..+ ..||+|++...     .+..+..+.+||.++++|+ |+|||.|++.. .   .
T Consensus        36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~-----de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~  110 (738)
T KOG1989|consen   36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVN-----DEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSS  110 (738)
T ss_pred             CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecC-----CHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccC
Confidence            34688999999999999999999655 99999987643     3566788999999999998 99999999932 1   1


Q ss_pred             C---CeEEEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEcCCCcEEEEec
Q 010676          402 E---SKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQD--VVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       402 ~---~~lyLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~g--IIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                      +   -.++|.||||.||.|.++|+.   .+|++.++++||++++.||.+||.+.  |||||||-+||||+.+|+.|||||
T Consensus       111 ~~~~~EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDF  190 (738)
T KOG1989|consen  111 NNGVWEVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDF  190 (738)
T ss_pred             CCceeEEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcc
Confidence            1   247899999999999999874   35999999999999999999999988  999999999999999999999999


Q ss_pred             CcccccccCC-cc----------cccCCCccccccccc
Q 010676          474 GLAKATKLND-VK----------SCRGTAFWMAPEVCS  500 (504)
Q Consensus       474 GLA~~~~~~~-~~----------s~~GT~~YmAPEVL~  500 (504)
                      |.|....... ..          ...-|+.|+|||++.
T Consensus       191 GSatt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMID  228 (738)
T KOG1989|consen  191 GSATTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMID  228 (738)
T ss_pred             cccccccCCCccHHHHHHHHHHHHhhCCccccChHHHh
Confidence            9986432211 00          012589999999985


No 237
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=99.93  E-value=2.1e-25  Score=218.96  Aligned_cols=163  Identities=24%  Similarity=0.379  Sum_probs=133.5

Q ss_pred             eeecccCceeEEEEEcc---CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEe
Q 010676          335 DLLGRGSFGSVYEGISD---DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLEL  411 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~---~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy  411 (504)
                      +.||+|+||.||+|...   ++..+++|.+.....    ......+.+|+.+++.++||||+++++++.+...+|+||||
T Consensus         1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~   76 (269)
T cd05087           1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSAS----VQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEF   76 (269)
T ss_pred             CcccccCCceEEEEEEcCCCCceEEEEEecCCCCC----hHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEEC
Confidence            35899999999999763   446788887654321    12234678899999999999999999999999999999999


Q ss_pred             ccCCCHHHHHHhc------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          412 VTKGSLLNLYQRY------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       412 ~~ggsL~~ll~~~------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      +++++|.+++...      ..++..+..++.|++.||.|||+++++|+||||+||+++.++.+||+|||+++......  
T Consensus        77 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~  156 (269)
T cd05087          77 CPLGDLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY  156 (269)
T ss_pred             CCCCcHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence            9999999988643      24556778899999999999999999999999999999999999999999986543222  


Q ss_pred             --cccccCCCcccccccccC
Q 010676          484 --VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g  501 (504)
                        .....++..|+|||++.+
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~  176 (269)
T cd05087         157 VTPDQLWVPLRWIAPELVDE  176 (269)
T ss_pred             ecCCCcCCcccccCHhHhcc
Confidence              122347888999999864


No 238
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=99.93  E-value=2.5e-25  Score=220.74  Aligned_cols=171  Identities=28%  Similarity=0.472  Sum_probs=144.1

Q ss_pred             ceeeeeeecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCe
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESK  404 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~  404 (504)
                      .|++.+.||.|+||.||+|.+    .+|..||+|.+..... ........++.+|+.++..+ +|+||+++++++..+..
T Consensus         1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~-~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~   79 (290)
T cd05613           1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATI-VQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTK   79 (290)
T ss_pred             CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhh-hhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCe
Confidence            478899999999999999987    3788999998864221 11122345677899999999 59999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          405 LYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +|+||||+++++|.+++... .+.+..+..++.||+.||.|||++|++||||+|+|||++.++.+||+|||++.......
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~  159 (290)
T cd05613          80 LHLILDYINGGELFTHLSQRERFKEQEVQIYSGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDE  159 (290)
T ss_pred             EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceeccccc
Confidence            99999999999999988654 48889999999999999999999999999999999999999999999999987654322


Q ss_pred             ---cccccCCCcccccccccC
Q 010676          484 ---VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ---~~s~~GT~~YmAPEVL~g  501 (504)
                         .....|+..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~  180 (290)
T cd05613         160 VERAYSFCGTIEYMAPDIVRG  180 (290)
T ss_pred             ccccccccCCcccCChhhccC
Confidence               223568999999999864


No 239
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=99.93  E-value=1.7e-25  Score=227.29  Aligned_cols=166  Identities=23%  Similarity=0.359  Sum_probs=138.3

Q ss_pred             eeeeeccc--CceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          333 KGDLLGRG--SFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       333 i~k~LG~G--~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      ++++||+|  +|++||++.+ .+|..||+|.+......   ......+.+|+.+++.++||||+++++++..++.+|+||
T Consensus         2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~   78 (327)
T cd08227           2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACT---NEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVT   78 (327)
T ss_pred             hhhhccccccceEEEEEEeecccCcEEEEEEechhhcc---HHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEE
Confidence            56789999  7899999988 68999999988643221   223456778999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC----
Q 010676          410 ELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN----  482 (504)
Q Consensus       410 Ey~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~----  482 (504)
                      ||+++++|.+++..   ..+++..++.++.||+.||.|||++||+||||||+|||++.++.++|+||+.+......    
T Consensus        79 e~~~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~  158 (327)
T cd08227          79 SFMAYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRL  158 (327)
T ss_pred             eccCCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccc
Confidence            99999999998864   34889999999999999999999999999999999999999999999999865432111    


Q ss_pred             -----CcccccCCCcccccccccC
Q 010676          483 -----DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 -----~~~s~~GT~~YmAPEVL~g  501 (504)
                           ......++..|||||++.+
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~  182 (327)
T cd08227         159 RVVHDFPKYSVKVLPWLSPEVLQQ  182 (327)
T ss_pred             cccccccccccceecccChHHhhc
Confidence                 0122347788999999875


No 240
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=99.93  E-value=1.3e-25  Score=223.00  Aligned_cols=170  Identities=27%  Similarity=0.432  Sum_probs=143.5

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--Ce
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--SK  404 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--~~  404 (504)
                      .+.|++.+.||.|+||.||+|.+ .++..+++|.+......   ......+.+|+.++.+++||||+++++++...  +.
T Consensus         4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~   80 (293)
T cd07843           4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEK---EGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDK   80 (293)
T ss_pred             hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeecccc---ccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCc
Confidence            46799999999999999999998 47889999988654322   11223466899999999999999999988777  88


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +|+||||+.+ +|.+++...  .+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++......
T Consensus        81 ~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  159 (293)
T cd07843          81 IYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSP  159 (293)
T ss_pred             EEEEehhcCc-CHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCC
Confidence            9999999985 888887653  3899999999999999999999999999999999999999999999999998765443


Q ss_pred             --CcccccCCCcccccccccC
Q 010676          483 --DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 --~~~s~~GT~~YmAPEVL~g  501 (504)
                        ......+++.|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~aPE~~~~  180 (293)
T cd07843         160 LKPYTQLVVTLWYRAPELLLG  180 (293)
T ss_pred             ccccccccccccccCchhhcC
Confidence              2233457899999998865


No 241
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=99.93  E-value=2.3e-26  Score=240.15  Aligned_cols=165  Identities=32%  Similarity=0.486  Sum_probs=141.4

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhh--CCCCceeEEeeeecCCC---
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR--FEHENIVQYYGTDKDES---  403 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~--L~HpnIV~l~~~~~~~~---  403 (504)
                      ...++.++||+|.||.||+|...+ +.||||++..        +..+.+.+|-+|...  ++|+||++++++-....   
T Consensus       210 ~pl~l~eli~~Grfg~V~KaqL~~-~~VAVKifp~--------~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~  280 (534)
T KOG3653|consen  210 DPLQLLELIGRGRFGCVWKAQLDN-RLVAVKIFPE--------QEKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADR  280 (534)
T ss_pred             CchhhHHHhhcCccceeehhhccC-ceeEEEecCH--------HHHHHHHhHHHHHhccCccchhHHHhhchhccCCccc
Confidence            345677899999999999998754 8999998863        233556677777665  57999999999876555   


Q ss_pred             -eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---------CceecCCCCCcEEEcCCCcEEEEec
Q 010676          404 -KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ---------DVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       404 -~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~---------gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                       .++||++|.+.|+|.+++..+.+++....+++..|++||+|||+-         .|+|||||..||||..+++..|+||
T Consensus       281 ~eywLVt~fh~kGsL~dyL~~ntisw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDF  360 (534)
T KOG3653|consen  281 MEYWLVTEFHPKGSLCDYLKANTISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADF  360 (534)
T ss_pred             cceeEEeeeccCCcHHHHHHhccccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecc
Confidence             799999999999999999999999999999999999999999962         5999999999999999999999999


Q ss_pred             CcccccccC----CcccccCCCcccccccccCC
Q 010676          474 GLAKATKLN----DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~----~~~s~~GT~~YmAPEVL~g~  502 (504)
                      |||..+...    +....+||..|||||||.|.
T Consensus       361 GLAl~~~p~~~~~d~~~qVGT~RYMAPEvLEga  393 (534)
T KOG3653|consen  361 GLALRLEPGKPQGDTHGQVGTRRYMAPEVLEGA  393 (534)
T ss_pred             ceeEEecCCCCCcchhhhhhhhhhcCHHHHhhh
Confidence            999875533    23446799999999999875


No 242
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning 
Probab=99.93  E-value=1.9e-25  Score=219.98  Aligned_cols=171  Identities=28%  Similarity=0.462  Sum_probs=145.4

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|.+ .++..|++|.+.....   .......+.+|+.+++.++|+||+++++++...+.+|+
T Consensus         1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i   77 (288)
T cd07833           1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESED---DEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYL   77 (288)
T ss_pred             CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcc---cccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEE
Confidence            3689999999999999999998 4688999998754322   12233568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC---
Q 010676          408 FLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND---  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~---  483 (504)
                      ||||++++.+..+... ..+++..+..++.||+.||.|||+++|+|+||+|+||+++.++.+||+|||++.......   
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~  157 (288)
T cd07833          78 VFEYVERTLLELLEASPGGLPPDAVRSYIWQLLQAIAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASP  157 (288)
T ss_pred             EEecCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcccc
Confidence            9999998777766654 458999999999999999999999999999999999999999999999999987654332   


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....++..|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~PE~~~~~  176 (288)
T cd07833         158 LTDYVATRWYRAPELLVGD  176 (288)
T ss_pred             ccCcccccCCcCCchhcCC
Confidence            2345688999999998764


No 243
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=99.93  E-value=4.3e-25  Score=214.15  Aligned_cols=170  Identities=32%  Similarity=0.606  Sum_probs=146.1

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||++.. .++..|++|.+......   ......+.+|+.+++.++|+||+++++++...+.+|+|
T Consensus         1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08218           1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMS---PKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIV   77 (256)
T ss_pred             CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCC---hHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEE
Confidence            488999999999999999998 57889999988643222   22235678999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          409 LELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |||+.+++|.+++...   .+++..+..++.|++.||.|||+++++|+||+|+|||++.++.++|+|||++.......  
T Consensus        78 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~  157 (256)
T cd08218          78 MDYCEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVEL  157 (256)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhh
Confidence            9999999999988653   47888999999999999999999999999999999999999999999999987654332  


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....|++.|+|||++.++
T Consensus       158 ~~~~~~~~~~~~pe~~~~~  176 (256)
T cd08218         158 ARTCIGTPYYLSPEICENR  176 (256)
T ss_pred             hhhccCCccccCHHHhCCC
Confidence            2234588999999998764


No 244
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=99.93  E-value=3.6e-25  Score=213.82  Aligned_cols=170  Identities=35%  Similarity=0.538  Sum_probs=144.2

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeec--CCCeEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDK--DESKLY  406 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~--~~~~ly  406 (504)
                      +|++.+.||.|+||.||++.+ .++..+++|.+......   ......+.+|+.+++.++|+||+++++++.  ....+|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (265)
T cd08217           1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMT---EKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLY   77 (265)
T ss_pred             CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCC---HHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEE
Confidence            488899999999999999987 57889999988643221   233466888999999999999999999775  345689


Q ss_pred             EEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHH-----HCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          407 IFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLH-----DQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLH-----s~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                      ++|||+++++|.+++..     ..+++..+..++.||+.||.|||     +.+|+|+||||+||+++.++.+||+|||++
T Consensus        78 ~~~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~  157 (265)
T cd08217          78 IVMEYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLA  157 (265)
T ss_pred             EEehhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEeccccc
Confidence            99999999999998864     35888999999999999999999     899999999999999999999999999998


Q ss_pred             cccccCC--cccccCCCcccccccccCC
Q 010676          477 KATKLND--VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       477 ~~~~~~~--~~s~~GT~~YmAPEVL~g~  502 (504)
                      .......  .....+++.|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~pE~~~~~  185 (265)
T cd08217         158 KILGHDSSFAKTYVGTPYYMSPEQLNHM  185 (265)
T ss_pred             ccccCCcccccccccCCCccChhhhcCC
Confidence            8765433  3345689999999998764


No 245
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1 
Probab=99.93  E-value=3.6e-25  Score=214.82  Aligned_cols=170  Identities=32%  Similarity=0.562  Sum_probs=146.1

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++++.||.|+||+||+|.. .++..+++|++......    .....+.+|+.+++.++|+||+++++.+...+.+|+
T Consensus         1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~i   76 (267)
T cd06610           1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQ----TSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWL   76 (267)
T ss_pred             CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcc----hHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEE
Confidence            3689999999999999999997 57889999987532221    145678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          408 FLELVTKGSLLNLYQR----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      ||||+.+++|.+++..    ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......
T Consensus        77 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~  156 (267)
T cd06610          77 VMPYLSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG  156 (267)
T ss_pred             EEeccCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence            9999999999999865    247889999999999999999999999999999999999999999999999987544322


Q ss_pred             c------ccccCCCcccccccccCC
Q 010676          484 V------KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~------~s~~GT~~YmAPEVL~g~  502 (504)
                      .      ....|+..|+|||++..+
T Consensus       157 ~~~~~~~~~~~~~~~y~~Pe~~~~~  181 (267)
T cd06610         157 DRTRKVRKTFVGTPCWMAPEVMEQV  181 (267)
T ss_pred             cccccccccccCChhhcChHHHccc
Confidence            1      234589999999988654


No 246
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=99.93  E-value=2.6e-25  Score=216.37  Aligned_cols=166  Identities=27%  Similarity=0.449  Sum_probs=139.5

Q ss_pred             ccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeee-cCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTD-KDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~-~~~~~ly  406 (504)
                      ..+|++.+.||+|+||.||++... +..+++|.+....       ....+.+|+.+++.++|+|++++++++ ...+.+|
T Consensus         5 ~~~~~~~~~lg~g~~~~v~~~~~~-~~~~~~k~~~~~~-------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~   76 (256)
T cd05082           5 MKELKLLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA-------TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLY   76 (256)
T ss_pred             HHhCeeeeeecccCCCeEEEEEEc-CCcEEEEEeCCCc-------hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceE
Confidence            357899999999999999999765 7788999774311       134678999999999999999999875 4567799


Q ss_pred             EEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          407 IFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      ++|||+++++|.+++....   +++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.......
T Consensus        77 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~  156 (256)
T cd05082          77 IVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ  156 (256)
T ss_pred             EEEECCCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccC
Confidence            9999999999999887543   7788999999999999999999999999999999999999999999999987543322


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                       ....++..|||||++.+.
T Consensus       157 -~~~~~~~~y~aPE~~~~~  174 (256)
T cd05082         157 -DTGKLPVKWTAPEALREK  174 (256)
T ss_pred             -CCCccceeecCHHHHccC
Confidence             233456789999998764


No 247
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=99.93  E-value=1.8e-25  Score=219.67  Aligned_cols=168  Identities=39%  Similarity=0.696  Sum_probs=145.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC---CCceeEEeeeecCCCeE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE---HENIVQYYGTDKDESKL  405 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~l  405 (504)
                      .|++.+.||+|+||.||+|.+ .++..|++|.+.....    ......+.+|+.+++.++   |||++++++++.....+
T Consensus         2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~   77 (277)
T cd06917           2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTP----DDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRL   77 (277)
T ss_pred             hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCC----chhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEE
Confidence            578889999999999999997 6889999998764322    222356778999998886   99999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          406 YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |+||||+.+++|.+++....+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......  
T Consensus        78 ~lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~  157 (277)
T cd06917          78 WIIMEYAEGGSVRTLMKAGPIAEKYISVIIREVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSK  157 (277)
T ss_pred             EEEEecCCCCcHHHHHHccCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccc
Confidence            999999999999999988889999999999999999999999999999999999999999999999999987654332  


Q ss_pred             cccccCCCcccccccccC
Q 010676          484 VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g  501 (504)
                      .....|+..|+|||++.+
T Consensus       158 ~~~~~~~~~y~aPE~~~~  175 (277)
T cd06917         158 RSTFVGTPYWMAPEVITE  175 (277)
T ss_pred             cccccCCcceeCHHHhcc
Confidence            233468999999998864


No 248
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=99.93  E-value=1.3e-25  Score=221.21  Aligned_cols=170  Identities=31%  Similarity=0.485  Sum_probs=144.7

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|.+. ++..||+|.+.......   .....+.+|+.+++.++|+||+++++++..+..+|+
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   77 (286)
T cd07846           1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDK---MVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYL   77 (286)
T ss_pred             CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcc---hhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEE
Confidence            36899999999999999999984 68999999875422211   223457789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      ||||+.+++|..+.... .+++..++.++.||+.||.|||+.||+|+||+|+||+++.++.++|+|||++.......  .
T Consensus        78 v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~  157 (286)
T cd07846          78 VFEFVDHTVLDDLEKYPNGLDESRVRKYLFQILRGIEFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVY  157 (286)
T ss_pred             EEecCCccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcccc
Confidence            99999999888876543 58999999999999999999999999999999999999999999999999987644322  2


Q ss_pred             ccccCCCcccccccccC
Q 010676          485 KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g  501 (504)
                      ....++..|+|||++.+
T Consensus       158 ~~~~~~~~y~aPE~~~~  174 (286)
T cd07846         158 TDYVATRWYRAPELLVG  174 (286)
T ss_pred             CcccceeeccCcHHhcc
Confidence            33458899999998864


No 249
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=99.93  E-value=3.1e-25  Score=216.35  Aligned_cols=169  Identities=27%  Similarity=0.449  Sum_probs=138.2

Q ss_pred             eeeeeeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe--
Q 010676          331 WQKGDLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK--  404 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~--  404 (504)
                      |++++.||+|+||.||+|...    .+..||+|.+.....   .......+.+|+.+++.++|+||+++++++.....  
T Consensus         1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   77 (273)
T cd05035           1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIH---TYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQ   77 (273)
T ss_pred             CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcC---CHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccc
Confidence            578899999999999999863    347899998764222   23334678899999999999999999998765544  


Q ss_pred             ----EEEEEEeccCCCHHHHHHh-------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEec
Q 010676          405 ----LYIFLELVTKGSLLNLYQR-------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       405 ----lyLVmEy~~ggsL~~ll~~-------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                          .+++|||+.+++|..++..       ..+++..+..++.|++.||.|||+++|+||||||+||+++.++.+||+||
T Consensus        78 ~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~df  157 (273)
T cd05035          78 KIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADF  157 (273)
T ss_pred             cCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCc
Confidence                7999999999999988743       24788899999999999999999999999999999999999999999999


Q ss_pred             CcccccccCCc----ccccCCCcccccccccCC
Q 010676          474 GLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      |+++.......    ....++..|+|||++.+.
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  190 (273)
T cd05035         158 GLSKKIYSGDYYRQGRIAKMPVKWIAIESLADR  190 (273)
T ss_pred             cceeeccccccccccccccCCccccCHhhcccC
Confidence            99886543321    122356789999988654


No 250
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=99.93  E-value=1.4e-25  Score=230.31  Aligned_cols=170  Identities=28%  Similarity=0.426  Sum_probs=138.9

Q ss_pred             cceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKD  401 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~  401 (504)
                      ++|++.+.||+|+||.||+|..      .+++.||+|++....    .......+.+|+.++..+ +|+||+++++++..
T Consensus         7 ~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~----~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~   82 (337)
T cd05054           7 DRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGA----TASEYKALMTELKILIHIGHHLNVVNLLGACTK   82 (337)
T ss_pred             HHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCC----CHHHHHHHHHHHHHHHhhccCcchhheeeeEec
Confidence            5799999999999999999964      245789999875321    122345677899999999 79999999998754


Q ss_pred             -CCeEEEEEEeccCCCHHHHHHh---------------------------------------------------------
Q 010676          402 -ESKLYIFLELVTKGSLLNLYQR---------------------------------------------------------  423 (504)
Q Consensus       402 -~~~lyLVmEy~~ggsL~~ll~~---------------------------------------------------------  423 (504)
                       +..+|++|||+++++|.+++..                                                         
T Consensus        83 ~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  162 (337)
T cd05054          83 PGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEG  162 (337)
T ss_pred             CCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhh
Confidence             4678999999999999988753                                                         


Q ss_pred             -----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC----cccccCCCccc
Q 010676          424 -----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWM  494 (504)
Q Consensus       424 -----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~Ym  494 (504)
                           ..+++..+..++.||+.||.|||++||+||||||.|||++.++.++|+|||++..+....    .....++..||
T Consensus       163 ~~~~~~~l~~~~~~~~~~qi~~aL~~lH~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y~  242 (337)
T cd05054         163 DELYKEPLTLEDLISYSFQVARGMEFLASRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKWM  242 (337)
T ss_pred             hHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCcccc
Confidence                 146788899999999999999999999999999999999999999999999997653222    12234677899


Q ss_pred             ccccccCC
Q 010676          495 APEVCSNP  502 (504)
Q Consensus       495 APEVL~g~  502 (504)
                      |||++.+.
T Consensus       243 aPE~~~~~  250 (337)
T cd05054         243 APESIFDK  250 (337)
T ss_pred             CcHHhcCC
Confidence            99987654


No 251
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=99.93  E-value=2.8e-25  Score=214.71  Aligned_cols=164  Identities=28%  Similarity=0.494  Sum_probs=137.8

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccC
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTK  414 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~g  414 (504)
                      ++||+|+||.||+|...++..+|+|.+.....    ......+.+|+.+++.++||||+++++++...+..|+||||+++
T Consensus         1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~   76 (250)
T cd05085           1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLP----QELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPG   76 (250)
T ss_pred             CccCCCCCceEEEEEecCCcEEEEEecCCcCC----HHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCC
Confidence            36999999999999988889999997753221    22234678999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc---ccccC
Q 010676          415 GSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV---KSCRG  489 (504)
Q Consensus       415 gsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~---~s~~G  489 (504)
                      ++|.+++...  .+.+..+..++.|++.+|.|||++|++|+||||+||+++.++.+||+|||++........   ....+
T Consensus        77 ~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (250)
T cd05085          77 GDFLSFLRKKKDELKTKQLVKFALDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQI  156 (250)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCC
Confidence            9999988653  478899999999999999999999999999999999999999999999999875432221   12234


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      +..|+|||++.++
T Consensus       157 ~~~y~aPE~~~~~  169 (250)
T cd05085         157 PIKWTAPEALNYG  169 (250)
T ss_pred             cccccCHHHhccC
Confidence            6679999998754


No 252
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.93  E-value=3.8e-26  Score=241.89  Aligned_cols=174  Identities=30%  Similarity=0.479  Sum_probs=149.4

Q ss_pred             ccccccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeec
Q 010676          322 GRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDK  400 (504)
Q Consensus       322 ~~~~~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~  400 (504)
                      ..+......|+++++||+||-+.||++...+...||+|.+....   ...+.+.-|.+||.+|.+|+ |.+||+||+|-.
T Consensus       354 ~~i~Vkg~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~---~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv  430 (677)
T KOG0596|consen  354 EIIKVKGREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLE---ADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEV  430 (677)
T ss_pred             eeEEECcchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhh---cCHHHHHHHHHHHHHHHHhcCCceEEEEeeeec
Confidence            34555566899999999999999999999888888888775433   33556778999999999997 999999999999


Q ss_pred             CCCeEEEEEEeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          401 DESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       401 ~~~~lyLVmEy~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      +++.+||||||=+ .+|..+++++.  +....++.|+.||+.++.++|.+||||.||||.|+|+ -.|.+||+|||+|..
T Consensus       431 ~d~~lYmvmE~Gd-~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH~~gIVHSDLKPANFLl-VkG~LKLIDFGIA~a  508 (677)
T KOG0596|consen  431 TDGYLYMVMECGD-IDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIHQHGIVHSDLKPANFLL-VKGRLKLIDFGIANA  508 (677)
T ss_pred             cCceEEEEeeccc-ccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHHHhceeecCCCcccEEE-EeeeEEeeeechhcc
Confidence            9999999999754 58999998776  3334889999999999999999999999999999999 689999999999998


Q ss_pred             cccCCc----ccccCCCccccccccc
Q 010676          479 TKLNDV----KSCRGTAFWMAPEVCS  500 (504)
Q Consensus       479 ~~~~~~----~s~~GT~~YmAPEVL~  500 (504)
                      +..+..    .+.+||+.||+||.|.
T Consensus       509 I~~DTTsI~kdsQvGT~NYMsPEAl~  534 (677)
T KOG0596|consen  509 IQPDTTSIVKDSQVGTVNYMSPEALT  534 (677)
T ss_pred             cCccccceeeccccCcccccCHHHHh
Confidence            776543    3557999999999875


No 253
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=99.93  E-value=3.2e-25  Score=225.85  Aligned_cols=172  Identities=29%  Similarity=0.461  Sum_probs=140.6

Q ss_pred             cccceeeeeeecccCceeEEEEEcc--------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEee
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISD--------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYG  397 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~--------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~  397 (504)
                      ...+|++++.||+|+||.||+|.+.        .+..||+|.+...    ........+.+|+.+++++ +|+||+++++
T Consensus        10 ~~~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~----~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~   85 (334)
T cd05100          10 SRTRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDD----ATDKDLSDLVSEMEMMKMIGKHKNIINLLG   85 (334)
T ss_pred             CHhHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccc----cCHHHHHHHHHHHHHHHhhcCCCCeeeeeE
Confidence            3457999999999999999999752        2236899976532    1123356788999999999 7999999999


Q ss_pred             eecCCCeEEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcE
Q 010676          398 TDKDESKLYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANI  460 (504)
Q Consensus       398 ~~~~~~~lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NI  460 (504)
                      ++...+.+|++|||+++++|.+++...                 .++...+..++.||+.||.|||++||+||||||+||
T Consensus        86 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~givH~dlkp~Ni  165 (334)
T cd05100          86 ACTQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLASQKCIHRDLAARNV  165 (334)
T ss_pred             EEccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceE
Confidence            999999999999999999999988643                 266778889999999999999999999999999999


Q ss_pred             EEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          461 LVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       461 LLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      |++.++.+||+|||+++......    .....++..|||||++.+.
T Consensus       166 ll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  211 (334)
T cd05100         166 LVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDR  211 (334)
T ss_pred             EEcCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccC
Confidence            99999999999999987644321    1112245679999998664


No 254
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=99.93  E-value=4e-25  Score=214.39  Aligned_cols=168  Identities=23%  Similarity=0.391  Sum_probs=142.9

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .+|++.+.||+|+||.||++.+.++..+++|.+......      ...+.+|+.+++.++||||+++++++.....+|+|
T Consensus         4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~~------~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd05112           4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAMS------EEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLV   77 (256)
T ss_pred             hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCCC------HHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEE
Confidence            478899999999999999999877889999987532221      23577899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc-
Q 010676          409 LELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK-  485 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~-  485 (504)
                      |||+.+++|.+++...  .+++..+..++.|++.+|.|||+++++|+||||+||+++.++.++|+|||++......... 
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~  157 (256)
T cd05112          78 FEFMEHGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTS  157 (256)
T ss_pred             EEcCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccc
Confidence            9999999999988653  4788999999999999999999999999999999999999999999999998765433222 


Q ss_pred             --cccCCCcccccccccCC
Q 010676          486 --SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 --s~~GT~~YmAPEVL~g~  502 (504)
                        ...++..|+|||++.++
T Consensus       158 ~~~~~~~~~~~aPe~~~~~  176 (256)
T cd05112         158 STGTKFPVKWSSPEVFSFS  176 (256)
T ss_pred             cCCCccchhhcCHhHhccC
Confidence              22345789999998754


No 255
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=99.93  E-value=3.9e-25  Score=216.00  Aligned_cols=167  Identities=30%  Similarity=0.458  Sum_probs=139.8

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +.|++.+.||+|+||.||+|.+..+..+++|.+.....      ....+.+|+.+++.++|+||+++++++. .+..|++
T Consensus         6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~~------~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v   78 (260)
T cd05069           6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGTM------MPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIV   78 (260)
T ss_pred             HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCCc------cHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEE
Confidence            57899999999999999999987777899997653221      1245778999999999999999999875 4568999


Q ss_pred             EEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc-
Q 010676          409 LELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~-  484 (504)
                      |||+.+++|.+++...   .+++..+..++.|++.||.|||+.||+|+||||+|||++.++.++|+|||++........ 
T Consensus        79 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~  158 (260)
T cd05069          79 TEFMGKGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT  158 (260)
T ss_pred             EEcCCCCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc
Confidence            9999999999988653   378888999999999999999999999999999999999999999999999876543322 


Q ss_pred             --ccccCCCcccccccccCC
Q 010676          485 --KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 --~s~~GT~~YmAPEVL~g~  502 (504)
                        ....++..|+|||++.++
T Consensus       159 ~~~~~~~~~~y~~Pe~~~~~  178 (260)
T cd05069         159 ARQGAKFPIKWTAPEAALYG  178 (260)
T ss_pred             ccCCCccchhhCCHHHhccC
Confidence              123366789999987653


No 256
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=99.93  E-value=2.5e-25  Score=218.98  Aligned_cols=161  Identities=19%  Similarity=0.281  Sum_probs=130.2

Q ss_pred             eecccCceeEEEEEccCCc---eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          336 LLGRGSFGSVYEGISDDGF---FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       336 ~LG~G~FG~VYka~~~~g~---~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      .||+|+||.||++...++.   .+++|.+....    .......+.+|+.+++.++||||+++++.+.....+|+||||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~   77 (268)
T cd05086           2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANA----SSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYC   77 (268)
T ss_pred             cCCCCcCceEEEEEEEcCCCcceEEEEEecCCC----ChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecC
Confidence            5999999999999764433   34455443221    1223467889999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-----CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC----C
Q 010676          413 TKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN----D  483 (504)
Q Consensus       413 ~ggsL~~ll~~~-----~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~----~  483 (504)
                      .+++|.+++.+.     .+....+..++.||+.||.|||+++|+||||||+|||++.++.++|+|||++......    .
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~  157 (268)
T cd05086          78 ELGDLKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET  157 (268)
T ss_pred             CCCcHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence            999999988653     2455677889999999999999999999999999999999999999999997643221    1


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....++..|+|||++.
T Consensus       158 ~~~~~~~~~y~aPE~~~  174 (268)
T cd05086         158 EDDKCVPLRWLAPELVG  174 (268)
T ss_pred             ccCCcCcccccCchhcc
Confidence            22345889999999975


No 257
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with 
Probab=99.93  E-value=5.1e-25  Score=212.85  Aligned_cols=170  Identities=29%  Similarity=0.491  Sum_probs=145.2

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||++.+ .++..+++|.+......   ......+.+|+.+|+.++|+||+++++.+...+.+++|
T Consensus         1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   77 (256)
T cd08220           1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMT---KDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIV   77 (256)
T ss_pred             CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccc---cHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEE
Confidence            488999999999999999988 57889999988643222   23346788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC-CcEEEEecCcccccccCC-
Q 010676          409 LELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKATKLND-  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~-g~VKL~DFGLA~~~~~~~-  483 (504)
                      |||+++++|.+++...   .+++..+..++.|++.+|.|||++||+|+||||.||+++.+ +.++|+|||++....... 
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (256)
T cd08220          78 MEYAPGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSK  157 (256)
T ss_pred             EecCCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCcc
Confidence            9999999999998753   37889999999999999999999999999999999999855 468999999987654332 


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....++..|+|||++.+.
T Consensus       158 ~~~~~~~~~y~aPE~~~~~  176 (256)
T cd08220         158 AYTVVGTPCYISPELCEGK  176 (256)
T ss_pred             ccccccCCcccCchhccCC
Confidence            2335689999999998764


No 258
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=99.93  E-value=9.2e-26  Score=225.93  Aligned_cols=170  Identities=32%  Similarity=0.541  Sum_probs=145.7

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .+.|.....||+|+||.||++.+ .++..||||.+....     ......+.+|+.+++.++|+||+++++.+...+.+|
T Consensus        21 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~   95 (292)
T cd06658          21 REYLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRK-----QQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELW   95 (292)
T ss_pred             HHHHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecch-----HHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEE
Confidence            34566667799999999999987 578899999875322     223456789999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          407 IFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      +||||+++++|.+++....+++.++..++.||+.||.|||++||+||||||+||+++.++.++|+|||++.......  .
T Consensus        96 lv~e~~~~~~L~~~~~~~~l~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~  175 (292)
T cd06658          96 VVMEFLEGGALTDIVTHTRMNEEQIATVCLSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKR  175 (292)
T ss_pred             EEEeCCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccC
Confidence            99999999999999887789999999999999999999999999999999999999999999999999987543222  2


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....|+..|+|||++.+.
T Consensus       176 ~~~~~~~~y~aPE~~~~~  193 (292)
T cd06658         176 KSLVGTPYWMAPEVISRL  193 (292)
T ss_pred             ceeecCccccCHHHHccC
Confidence            334689999999998653


No 259
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=3.3e-26  Score=246.35  Aligned_cols=162  Identities=41%  Similarity=0.659  Sum_probs=141.8

Q ss_pred             eecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccC
Q 010676          336 LLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTK  414 (504)
Q Consensus       336 ~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~g  414 (504)
                      +||+|+||+||-|++ .+...+|||.+....     ....+-+..||.+-+.|+|.|||+++|.+..++.+-|+||-++|
T Consensus       582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekd-----sr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPG  656 (1226)
T KOG4279|consen  582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKD-----SREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPG  656 (1226)
T ss_pred             EeecCceeEEEeeccccceeEEEeeeccccc-----chhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCC
Confidence            599999999999999 577899999886432     23346788999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhc--CC--ChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEc-CCCcEEEEecCccccccc--CCcccc
Q 010676          415 GSLLNLYQRY--HL--RDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVD-ANGSVKLADFGLAKATKL--NDVKSC  487 (504)
Q Consensus       415 gsL~~ll~~~--~l--~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd-~~g~VKL~DFGLA~~~~~--~~~~s~  487 (504)
                      |+|.++++..  .+  ++.++..|.+||+.||.|||++.|||||||-+|+||+ ..|.+||.|||-++.+..  ....++
T Consensus       657 GSLSsLLrskWGPlKDNEstm~fYtkQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETF  736 (1226)
T KOG4279|consen  657 GSLSSLLRSKWGPLKDNESTMNFYTKQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETF  736 (1226)
T ss_pred             CcHHHHHHhccCCCccchhHHHHHHHHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCcccccc
Confidence            9999999753  35  7788999999999999999999999999999999997 679999999999886542  235567


Q ss_pred             cCCCcccccccccCC
Q 010676          488 RGTAFWMAPEVCSNP  502 (504)
Q Consensus       488 ~GT~~YmAPEVL~g~  502 (504)
                      .||..||||||+..|
T Consensus       737 TGTLQYMAPEvIDqG  751 (1226)
T KOG4279|consen  737 TGTLQYMAPEVIDQG  751 (1226)
T ss_pred             ccchhhhChHhhccC
Confidence            799999999999865


No 260
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=99.93  E-value=2.7e-25  Score=221.73  Aligned_cols=170  Identities=26%  Similarity=0.353  Sum_probs=139.7

Q ss_pred             cceeeeeeecccCceeEEEEEcc-----------------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCc
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-----------------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN  391 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-----------------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn  391 (504)
                      ++|++.+.||+|+||.||++...                 +...+|+|.+....    .......+.+|+.+++.++|+|
T Consensus         5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~----~~~~~~~~~~E~~~l~~l~~~~   80 (296)
T cd05095           5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDA----NKNARNDFLKEIKIMSRLKDPN   80 (296)
T ss_pred             hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCC
Confidence            46899999999999999998532                 34568888775321    1233457889999999999999


Q ss_pred             eeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcC------------CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCc
Q 010676          392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYH------------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCAN  459 (504)
Q Consensus       392 IV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~------------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~N  459 (504)
                      |+++++++...+.+|+||||+.+++|.+++....            +++..+..++.||+.||.|||++||+|+||||+|
T Consensus        81 i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH~~~i~H~dlkp~N  160 (296)
T cd05095          81 IIRLLAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLSSLNFVHRDLATRN  160 (296)
T ss_pred             cceEEEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHHHCCeecccCChhe
Confidence            9999999999999999999999999999886532            5567899999999999999999999999999999


Q ss_pred             EEEcCCCcEEEEecCcccccccCCc----ccccCCCcccccccccCC
Q 010676          460 ILVDANGSVKLADFGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       460 ILLd~~g~VKL~DFGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      ||++.++.++|+|||+++.......    ....++..|+|||++.++
T Consensus       161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  207 (296)
T cd05095         161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLG  207 (296)
T ss_pred             EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcC
Confidence            9999999999999999876433321    122346789999976543


No 261
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=99.93  E-value=4.1e-25  Score=217.40  Aligned_cols=168  Identities=27%  Similarity=0.441  Sum_probs=137.5

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHH-HhhCCCCceeEEeeeecCCCeEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL-LSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      ++|++.+.||+|+||.||++.+ .+|..||+|.+.......    ....+..|+.+ ++.++||||+++++++..++.+|
T Consensus         1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~----~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~   76 (283)
T cd06617           1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQ----EQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVW   76 (283)
T ss_pred             CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcH----HHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEE
Confidence            3689999999999999999998 579999999886432211    12334455554 56678999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          407 IFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQ-DVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~-gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      ++|||++ ++|.+++..     ..+++..+..++.||+.||.|||++ +++||||||+|||++.++.+||+|||++....
T Consensus        77 lv~e~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~  155 (283)
T cd06617          77 ICMEVMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV  155 (283)
T ss_pred             EEhhhhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence            9999997 578777654     2488999999999999999999997 99999999999999999999999999987654


Q ss_pred             cCCc-ccccCCCcccccccccC
Q 010676          481 LNDV-KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~~~-~s~~GT~~YmAPEVL~g  501 (504)
                      .... ....|+..|+|||++.+
T Consensus       156 ~~~~~~~~~~~~~y~aPE~~~~  177 (283)
T cd06617         156 DSVAKTIDAGCKPYMAPERINP  177 (283)
T ss_pred             cccccccccCCccccChhhcCC
Confidence            3322 22458999999998864


No 262
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.93  E-value=7.6e-26  Score=234.92  Aligned_cols=170  Identities=32%  Similarity=0.457  Sum_probs=142.3

Q ss_pred             ccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC--
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES--  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~--  403 (504)
                      -+.++.++.+.||+|.||.||+|.++ |..||||++...+...+..      +.||.....|+|+||+.+++....++  
T Consensus       208 TiarqI~L~e~IGkGRyGEVwrG~wr-Ge~VAVKiF~srdE~SWfr------EtEIYqTvmLRHENILgFIaaD~~~~gs  280 (513)
T KOG2052|consen  208 TIARQIVLQEIIGKGRFGEVWRGRWR-GEDVAVKIFSSRDERSWFR------ETEIYQTVMLRHENILGFIAADNKDNGS  280 (513)
T ss_pred             hhhheeEEEEEecCccccceeecccc-CCceEEEEecccchhhhhh------HHHHHHHHHhccchhhhhhhccccCCCc
Confidence            34567889999999999999999886 7899999997655433221      24555556689999999998865543  


Q ss_pred             --eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC--------CceecCCCCCcEEEcCCCcEEEEec
Q 010676          404 --KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ--------DVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       404 --~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~--------gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                        ++|||++|.+.|+|++++.++.++.+..++++..++.||+|||..        .|.|||||..||||.++|.+.|+|+
T Consensus       281 ~TQLwLvTdYHe~GSL~DyL~r~tv~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADL  360 (513)
T KOG2052|consen  281 WTQLWLVTDYHEHGSLYDYLNRNTVTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADL  360 (513)
T ss_pred             eEEEEEeeecccCCcHHHHHhhccCCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeec
Confidence              599999999999999999999999999999999999999999952        4999999999999999999999999


Q ss_pred             CcccccccCC------cccccCCCcccccccccCC
Q 010676          474 GLAKATKLND------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~~------~~s~~GT~~YmAPEVL~g~  502 (504)
                      |||.......      ....+||..|||||||...
T Consensus       361 GLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdet  395 (513)
T KOG2052|consen  361 GLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDET  395 (513)
T ss_pred             eeeEEecccCCcccCCCCCccceeeccChHHhhhh
Confidence            9997654331      2345799999999999753


No 263
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=99.93  E-value=3.2e-25  Score=221.68  Aligned_cols=170  Identities=28%  Similarity=0.507  Sum_probs=138.1

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCc--eEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCe
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGF--FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESK  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~--~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~  404 (504)
                      ++|++.+.||+|+||.||+|+.. ++.  .+++|.++...    .....+.+.+|+.++.++ +||||+++++++...+.
T Consensus         2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~----~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~   77 (297)
T cd05089           2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFA----SENDHRDFAGELEVLCKLGHHPNIINLLGACENRGY   77 (297)
T ss_pred             ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccC----CHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCc
Confidence            57899999999999999999874 333  46777665221    122345688999999999 69999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCc
Q 010676          405 LYIFLELVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS  467 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~  467 (504)
                      +|+||||+++++|.+++...                 .+++..+..++.||+.||+|||++||+||||||+|||++.++.
T Consensus        78 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~  157 (297)
T cd05089          78 LYIAIEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLSEKQFIHRDLAARNVLVGENLA  157 (297)
T ss_pred             ceEEEEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHCCcccCcCCcceEEECCCCe
Confidence            99999999999999998653                 3778889999999999999999999999999999999999999


Q ss_pred             EEEEecCcccccccCCcc-cccCCCcccccccccCC
Q 010676          468 VKLADFGLAKATKLNDVK-SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       468 VKL~DFGLA~~~~~~~~~-s~~GT~~YmAPEVL~g~  502 (504)
                      +||+|||++......... ....+..|+|||++.++
T Consensus       158 ~kl~dfg~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  193 (297)
T cd05089         158 SKIADFGLSRGEEVYVKKTMGRLPVRWMAIESLNYS  193 (297)
T ss_pred             EEECCcCCCccccceeccCCCCcCccccCchhhccC
Confidence            999999998643221111 12235579999988654


No 264
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=99.93  E-value=5.1e-25  Score=213.42  Aligned_cols=169  Identities=33%  Similarity=0.526  Sum_probs=148.2

Q ss_pred             ceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||+|.+. ++..|++|++......    .....+.+|+.++..++|+||+++++++.....+|+|
T Consensus         2 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv   77 (264)
T cd06623           2 DLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDE----EFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIV   77 (264)
T ss_pred             cceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcch----HHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEE
Confidence            6889999999999999999985 6999999988643321    3346788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc-
Q 010676          409 LELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK-  485 (504)
Q Consensus       409 mEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~-  485 (504)
                      |||+++++|.+++.. ..+++..+..++.|++.+|.|||+ ++++|+||+|+||+++.++.++|+|||++......... 
T Consensus        78 ~e~~~~~~L~~~l~~~~~l~~~~~~~~~~~l~~~l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~  157 (264)
T cd06623          78 LEYMDGGSLADLLKKVGKIPEPVLAYIARQILKGLDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQC  157 (264)
T ss_pred             EEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcc
Confidence            999999999999875 568999999999999999999999 99999999999999999999999999998765443322 


Q ss_pred             -cccCCCcccccccccCC
Q 010676          486 -SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 -s~~GT~~YmAPEVL~g~  502 (504)
                       ...++..|+|||++.++
T Consensus       158 ~~~~~~~~y~~pE~~~~~  175 (264)
T cd06623         158 NTFVGTVTYMSPERIQGE  175 (264)
T ss_pred             cceeecccccCHhhhCCC
Confidence             45688999999988764


No 265
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=99.93  E-value=3.6e-25  Score=213.38  Aligned_cols=168  Identities=32%  Similarity=0.515  Sum_probs=142.0

Q ss_pred             eeeeeeecccCceeEEEEEcc-C----CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          331 WQKGDLLGRGSFGSVYEGISD-D----GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~-~----g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      +++.+.||.|+||.||++.+. .    +..+|+|.+.....    ......+.+|+.++..++|+||+++++++.+.+..
T Consensus         1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   76 (258)
T smart00219        1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDAD----EQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPL   76 (258)
T ss_pred             CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCC----hHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCee
Confidence            356788999999999999984 3    48899998754321    11346788999999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          406 YIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      |++|||+++++|.+++....   +++..+..++.||+.||.|||+++++|+||||+||+++.++.++|+|||++......
T Consensus        77 ~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~  156 (258)
T smart00219       77 MIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD  156 (258)
T ss_pred             EEEEeccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence            99999999999999886543   899999999999999999999999999999999999999999999999998765433


Q ss_pred             Ccc---cccCCCcccccccccCC
Q 010676          483 DVK---SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~---s~~GT~~YmAPEVL~g~  502 (504)
                      ...   ...+++.|+|||.+.+.
T Consensus       157 ~~~~~~~~~~~~~y~~Pe~~~~~  179 (258)
T smart00219      157 DYYKKKGGKLPIRWMAPESLKDG  179 (258)
T ss_pred             cccccccCCCcccccChHHhccC
Confidence            211   12367899999988543


No 266
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=99.93  E-value=4.3e-25  Score=222.09  Aligned_cols=175  Identities=29%  Similarity=0.442  Sum_probs=145.2

Q ss_pred             ccccccceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEe
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYY  396 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~  396 (504)
                      +.-..++|.+.+.||+|+||.||++..      .++..+|+|.+.....    ......+.+|+.+++++ +|+||++++
T Consensus        30 ~~~~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~----~~~~~~~~~E~~~l~~l~~h~~iv~~~  105 (302)
T cd05055          30 WEFPRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAH----SSEREALMSELKIMSHLGNHENIVNLL  105 (302)
T ss_pred             ccccHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCC----hHHHHHHHHHHHHHHhccCCCCcceEE
Confidence            334456899999999999999999974      2456899997753321    22345688999999999 799999999


Q ss_pred             eeecCCCeEEEEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEec
Q 010676          397 GTDKDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       397 ~~~~~~~~lyLVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                      +++...+.+|++|||+.+++|.+++....   +++.++..++.||+.||.|||+++|+|+||||+|||++.++.++|+||
T Consensus       106 ~~~~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~df  185 (302)
T cd05055         106 GACTIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDF  185 (302)
T ss_pred             EEEecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeehhhhccceEEEcCCCeEEECCC
Confidence            99999999999999999999999987532   789999999999999999999999999999999999999999999999


Q ss_pred             CcccccccCC----cccccCCCcccccccccCC
Q 010676          474 GLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      |+++......    .....++..|+|||++.++
T Consensus       186 g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  218 (302)
T cd05055         186 GLARDIMNDSNYVVKGNARLPVKWMAPESIFNC  218 (302)
T ss_pred             cccccccCCCceeecCCCCcccccCCHhhhccC
Confidence            9987544322    1123467789999988654


No 267
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=99.93  E-value=3.7e-25  Score=220.15  Aligned_cols=175  Identities=28%  Similarity=0.473  Sum_probs=142.4

Q ss_pred             ccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      +...+++|++.+.||+|+||.||+|.+ .++..||+|.+.......   .....+.+|+.+++.++||||+++++++...
T Consensus         7 ~~~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~---~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~   83 (310)
T cd07865           7 FCDEVSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKE---GFPITALREIKILQLLKHENVVNLIEICRTK   83 (310)
T ss_pred             ccchhhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcC---CchhHHHHHHHHHHhCCCCCccceEEEEecc
Confidence            345567899999999999999999998 578999999886432211   1123456899999999999999999987654


Q ss_pred             C--------eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          403 S--------KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       403 ~--------~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                      .        ..|+||||+.+ +|.+++...  .+++.++..++.||+.||.|||++|++|+||||+|||++.++.+||+|
T Consensus        84 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~d  162 (310)
T cd07865          84 ATPYNRYKGSFYLVFEFCEH-DLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIHRNKILHRDMKAANILITKDGILKLAD  162 (310)
T ss_pred             cccccCCCceEEEEEcCCCc-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEECCCCcEEECc
Confidence            3        46999999975 787777654  589999999999999999999999999999999999999999999999


Q ss_pred             cCcccccccCC------cccccCCCcccccccccCC
Q 010676          473 FGLAKATKLND------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       473 FGLA~~~~~~~------~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||++.......      .....++..|+|||++.+.
T Consensus       163 fg~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  198 (310)
T cd07865         163 FGLARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGE  198 (310)
T ss_pred             CCCcccccCCcccCCCCccCcccCccccCcHHhcCC
Confidence            99987543222      1233578899999987653


No 268
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=99.93  E-value=1.1e-26  Score=232.63  Aligned_cols=171  Identities=30%  Similarity=0.460  Sum_probs=141.0

Q ss_pred             ccceeeeeeecccCceeEEEEEcc---C--CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISD---D--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~---~--g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-  401 (504)
                      ...|++...||+|+||.||+|...   +  .+.||+|.++..+...-.   -....+|+.+++.++||||+.+..+|.+ 
T Consensus        23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGi---S~SAcREiaL~REl~h~nvi~Lv~Vfl~~   99 (438)
T KOG0666|consen   23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGI---SMSACREIALLRELKHPNVISLVKVFLSH   99 (438)
T ss_pred             HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCc---CHHHHHHHHHHHHhcCCcchhHHHHHhcc
Confidence            457999999999999999999652   2  337899987654332111   1234589999999999999999998877 


Q ss_pred             CCeEEEEEEeccCCCHHHHHHh------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC----CcEEEE
Q 010676          402 ESKLYIFLELVTKGSLLNLYQR------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN----GSVKLA  471 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~----g~VKL~  471 (504)
                      +..+|+++||.+. +|..+++-      ..++...++.|++||+.|+.|||++.|+||||||.||||..+    |.|||+
T Consensus       100 d~~v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIa  178 (438)
T KOG0666|consen  100 DKKVWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIA  178 (438)
T ss_pred             CceEEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEee
Confidence            7889999999987 78887753      238889999999999999999999999999999999999877    899999


Q ss_pred             ecCcccccccC-----CcccccCCCcccccccccCC
Q 010676          472 DFGLAKATKLN-----DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       472 DFGLA~~~~~~-----~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||||++.+...     .....+-|.+|+|||+|.|.
T Consensus       179 DlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa  214 (438)
T KOG0666|consen  179 DLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGA  214 (438)
T ss_pred             cccHHHHhhccccccccCCceEEEEEecChHHhccc
Confidence            99999976533     23445689999999999874


No 269
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=99.93  E-value=4.1e-25  Score=233.45  Aligned_cols=175  Identities=28%  Similarity=0.426  Sum_probs=143.2

Q ss_pred             ccccccceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEe
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYY  396 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~  396 (504)
                      +....++|.+++.||+|+||.||+|++.      .+..||+|++.....    ......+.+|+.+|..+. |||||+++
T Consensus        32 ~~~~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~----~~~~~~~~~E~~~l~~l~~H~niv~~~  107 (401)
T cd05107          32 WEMPRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTAR----SSEKQALMSELKIMSHLGPHLNIVNLL  107 (401)
T ss_pred             ceecHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCC----hhHHHHHHHHHHHHHhcCCCCCeEEEE
Confidence            3344567899999999999999999852      456899998864321    122346889999999997 99999999


Q ss_pred             eeecCCCeEEEEEEeccCCCHHHHHHhc----------------------------------------------------
Q 010676          397 GTDKDESKLYIFLELVTKGSLLNLYQRY----------------------------------------------------  424 (504)
Q Consensus       397 ~~~~~~~~lyLVmEy~~ggsL~~ll~~~----------------------------------------------------  424 (504)
                      +++.....+|+||||+.+|+|.+++...                                                    
T Consensus       108 ~~~~~~~~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  187 (401)
T cd05107         108 GACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESA  187 (401)
T ss_pred             EEEccCCCcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCcccc
Confidence            9999999999999999999999988643                                                    


Q ss_pred             -----------------------------------------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 010676          425 -----------------------------------------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKC  457 (504)
Q Consensus       425 -----------------------------------------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP  457 (504)
                                                                     .+++..+..|+.||+.||.|||+++|+||||||
T Consensus       188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrdlkp  267 (401)
T cd05107         188 DYVPMQDMKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLASKNCVHRDLAA  267 (401)
T ss_pred             CccchhcchhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHhcCCcCcccCCc
Confidence                                                           145566788999999999999999999999999


Q ss_pred             CcEEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          458 ANILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       458 ~NILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +|||++.++.+||+|||+++......    .....+++.|||||++.+.
T Consensus       268 ~NiLl~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  316 (401)
T cd05107         268 RNVLICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNN  316 (401)
T ss_pred             ceEEEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCC
Confidence            99999999999999999987543221    1233477889999998764


No 270
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=99.93  E-value=3.9e-25  Score=215.13  Aligned_cols=169  Identities=31%  Similarity=0.614  Sum_probs=143.1

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCC-
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDES-  403 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~-  403 (504)
                      ..++|++.+.||+|+||.||+|.+ .++..+++|.+.....      ....+.+|+.+++++ .|+||+++++++.... 
T Consensus         4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~------~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~   77 (275)
T cd06608           4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED------EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP   77 (275)
T ss_pred             chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch------hHHHHHHHHHHHHHhcCCCChheEEEEEEecCC
Confidence            457899999999999999999998 4778999998764321      235678999999998 6999999999986544 


Q ss_pred             -----eEEEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEec
Q 010676          404 -----KLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       404 -----~lyLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                           .+|+||||+.+++|.+++..     ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+||
T Consensus        78 ~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~  157 (275)
T cd06608          78 PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDF  157 (275)
T ss_pred             CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCC
Confidence                 58999999999999988754     35889999999999999999999999999999999999999999999999


Q ss_pred             CcccccccCC--cccccCCCcccccccccC
Q 010676          474 GLAKATKLND--VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       474 GLA~~~~~~~--~~s~~GT~~YmAPEVL~g  501 (504)
                      |++.......  .....|+..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  187 (275)
T cd06608         158 GVSAQLDSTLGRRNTFIGTPYWMAPEVIAC  187 (275)
T ss_pred             ccceecccchhhhcCccccccccCHhHhcc
Confidence            9987543222  234568999999998753


No 271
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=99.93  E-value=2.7e-25  Score=218.13  Aligned_cols=170  Identities=26%  Similarity=0.428  Sum_probs=142.6

Q ss_pred             cceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      ++|++.+.||+|+||.||+|+..      +...+++|.+....    .......+.+|+.++++++|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~   80 (275)
T cd05046           5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTK----DENLQSEFRRELDMFRKLSHKNVVRLLGLCREA   80 (275)
T ss_pred             HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCcc----chHHHHHHHHHHHHHHhcCCcceeeeEEEECCC
Confidence            57889999999999999999863      34678888764322    122346688999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcC----------CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYH----------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~----------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                      +..|+||||+++++|.+++....          +++..+..++.||+.||.|||+++|+|+||||+|||++.++.++|+|
T Consensus        81 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~  160 (275)
T cd05046          81 EPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSL  160 (275)
T ss_pred             CcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcc
Confidence            99999999999999999986543          88999999999999999999999999999999999999999999999


Q ss_pred             cCcccccccCC---cccccCCCcccccccccCC
Q 010676          473 FGLAKATKLND---VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       473 FGLA~~~~~~~---~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||++.......   .....++..|+|||.+.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~~  193 (275)
T cd05046         161 LSLSKDVYNSEYYKLRNALIPLRWLAPEAVQED  193 (275)
T ss_pred             cccccccCcccccccCCceeEEeecChhhhccC
Confidence            99986533221   2233467789999987654


No 272
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. 
Probab=99.93  E-value=4.9e-25  Score=216.98  Aligned_cols=167  Identities=32%  Similarity=0.532  Sum_probs=141.7

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||.|+||.||+|++ .+|..||+|++.......    ....+.+|+.+++.++|+||+++++++...+.+|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~----~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv   76 (284)
T cd07836           1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEG----TPSTAIREISLMKELKHENIVRLHDVIHTENKLMLV   76 (284)
T ss_pred             CceEeeeeccCCceEEEEEEECCCCeEEEEEEeccccccc----chHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEE
Confidence            488999999999999999998 578999999886533211    124466899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--
Q 010676          409 LELVTKGSLLNLYQRY----HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--  482 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~----~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--  482 (504)
                      |||+.+ +|.+++...    .+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++......  
T Consensus        77 ~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~  155 (284)
T cd07836          77 FEYMDK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN  155 (284)
T ss_pred             EecCCc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence            999986 788877643    4899999999999999999999999999999999999999999999999998754322  


Q ss_pred             CcccccCCCcccccccccC
Q 010676          483 DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g  501 (504)
                      ......+|..|++||++.+
T Consensus       156 ~~~~~~~~~~y~~PE~~~~  174 (284)
T cd07836         156 TFSNEVVTLWYRAPDVLLG  174 (284)
T ss_pred             ccccccccccccChHHhcC
Confidence            1233457899999998865


No 273
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.93  E-value=3.2e-25  Score=231.73  Aligned_cols=170  Identities=19%  Similarity=0.159  Sum_probs=132.1

Q ss_pred             ccccccccceeeeeeecccCceeEEEEEcc--CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeE-Eeee
Q 010676          322 GRFKRIITYWQKGDLLGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQ-YYGT  398 (504)
Q Consensus       322 ~~~~~~~~~y~i~k~LG~G~FG~VYka~~~--~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~-l~~~  398 (504)
                      .....+...|.+.+.||+|+||+||+|.+.  ++..+|||++...............+.+|+.+|+.++|+|++. ++++
T Consensus        11 ~~~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~   90 (365)
T PRK09188         11 DQIPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT   90 (365)
T ss_pred             cccccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc
Confidence            344567788999999999999999999873  6778899976422110011233456889999999999999985 5543


Q ss_pred             ecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCC-CCCcEEEcCCCcEEEEecCccc
Q 010676          399 DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI-KCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       399 ~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDL-KP~NILLd~~g~VKL~DFGLA~  477 (504)
                          +..||||||++|++|... ..  ..   ...++.|++.+|.|||++||+|||| ||+|||++.++.+||+|||+|+
T Consensus        91 ----~~~~LVmE~~~G~~L~~~-~~--~~---~~~~~~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~  160 (365)
T PRK09188         91 ----GKDGLVRGWTEGVPLHLA-RP--HG---DPAWFRSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLAS  160 (365)
T ss_pred             ----CCcEEEEEccCCCCHHHh-Cc--cc---hHHHHHHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccce
Confidence                357999999999999632 11  11   2468899999999999999999999 9999999999999999999998


Q ss_pred             ccccCC----------cccccCCCcccccccccC
Q 010676          478 ATKLND----------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       478 ~~~~~~----------~~s~~GT~~YmAPEVL~g  501 (504)
                      ......          .....+|+.|+|||++..
T Consensus       161 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~  194 (365)
T PRK09188        161 VFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTP  194 (365)
T ss_pred             ecccCcchhhhhhhhhhhhhhccCccCCcccCCh
Confidence            654322          234568999999999863


No 274
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=99.93  E-value=1.2e-25  Score=225.53  Aligned_cols=168  Identities=33%  Similarity=0.541  Sum_probs=144.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|.....||+|+||.||++.+ .++..|++|.+.....     .....+.+|+.++..++||||+++++++...+.+|++
T Consensus        22 ~~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv   96 (297)
T cd06659          22 LLENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQ-----QRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVL   96 (297)
T ss_pred             hHHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEeccc-----chHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEE
Confidence            444556799999999999998 5789999998864322     1234577899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--ccc
Q 010676          409 LELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~s  486 (504)
                      |||+++++|..++....+++..+..++.|++.||.|||++||+|+||||+|||++.++.++|+|||++.......  ...
T Consensus        97 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~  176 (297)
T cd06659          97 MEFLQGGALTDIVSQTRLNEEQIATVCESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKS  176 (297)
T ss_pred             EecCCCCCHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccc
Confidence            999999999999888889999999999999999999999999999999999999999999999999987543322  234


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..|+..|+|||++.+.
T Consensus       177 ~~~~~~y~aPE~~~~~  192 (297)
T cd06659         177 LVGTPYWMAPEVISRT  192 (297)
T ss_pred             eecCccccCHHHHccC
Confidence            5689999999998753


No 275
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=99.93  E-value=2.3e-25  Score=227.11  Aligned_cols=170  Identities=31%  Similarity=0.557  Sum_probs=142.4

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC---
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE---  402 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~---  402 (504)
                      +.++|++.+.||+|+||.||+|.+ .+|..||+|.+.....    ......+.+|+.+++.++|+||+++++++...   
T Consensus         3 ~~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~----~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~   78 (336)
T cd07849           3 VGPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEH----QTFCQRTLREIKILRRFKHENIIGILDIIRPPSFE   78 (336)
T ss_pred             cccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEeccccc----chhHHHHHHHHHHHHhCCCCCcCchhheeeccccc
Confidence            346899999999999999999987 5789999998853221    22345577899999999999999999876543   


Q ss_pred             --CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          403 --SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       403 --~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                        ..+|++|||+.+ +|..++....+++..+..++.|++.||.|||++||+||||||+|||++.++.+||+|||++....
T Consensus        79 ~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~~ql~~aL~~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~  157 (336)
T cd07849          79 SFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIAD  157 (336)
T ss_pred             ccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEECcccceeecc
Confidence              458999999975 88888888889999999999999999999999999999999999999999999999999987543


Q ss_pred             cCC-----cccccCCCcccccccccC
Q 010676          481 LND-----VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~~-----~~s~~GT~~YmAPEVL~g  501 (504)
                      ...     .....||+.|||||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~y~aPE~~~~  183 (336)
T cd07849         158 PEHDHTGFLTEYVATRWYRAPEIMLN  183 (336)
T ss_pred             ccccccCCcCCcCcCCCccChHHhhC
Confidence            221     123468999999998653


No 276
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a 
Probab=99.93  E-value=4.5e-25  Score=213.27  Aligned_cols=167  Identities=35%  Similarity=0.619  Sum_probs=146.3

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.|.+.+.||.|+||.||+|... ++..|++|.+.....       ...+.+|+.+++.++|+||+++++++.....+|+
T Consensus         3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-------~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l   75 (256)
T cd06612           3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED-------LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWI   75 (256)
T ss_pred             ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH-------HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEE
Confidence            57889999999999999999985 588999998753211       4678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      +|||+.+++|.+++..  ..+++..+..++.|++.||.|||+.+|+|+||+|.||+++.++.++|+|||++.......  
T Consensus        76 ~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~  155 (256)
T cd06612          76 VMEYCGAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAK  155 (256)
T ss_pred             EEecCCCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccc
Confidence            9999999999999864  348899999999999999999999999999999999999999999999999987654332  


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....++..|+|||++.+.
T Consensus       156 ~~~~~~~~~y~~PE~~~~~  174 (256)
T cd06612         156 RNTVIGTPFWMAPEVIQEI  174 (256)
T ss_pred             cccccCCccccCHHHHhcC
Confidence            2334588999999998764


No 277
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=99.93  E-value=1.6e-25  Score=217.95  Aligned_cols=169  Identities=29%  Similarity=0.452  Sum_probs=146.7

Q ss_pred             ceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||.|+||.||++.+. ++..+++|.+.....    ......+.+|+.+++.++||||+++++.+...+.+|++
T Consensus         2 ~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv   77 (265)
T cd06605           2 DLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEIN----EAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISIC   77 (265)
T ss_pred             cchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccC----hHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEE
Confidence            5788899999999999999984 789999998864322    13346688999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          409 LELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       409 mEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      |||+.+++|.+++..  ..+++..+..++.|++.+|.|||+ .|++|+||||+||+++.++.++|+|||++.........
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~  157 (265)
T cd06605          78 MEYMDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAK  157 (265)
T ss_pred             EEecCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhh
Confidence            999999999999875  458889999999999999999999 99999999999999999999999999998765433333


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...++..|+|||++.+.
T Consensus       158 ~~~~~~~y~~PE~~~~~  174 (265)
T cd06605         158 TFVGTSSYMAPERIQGN  174 (265)
T ss_pred             cccCChhccCHHHHcCC
Confidence            36789999999998654


No 278
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=99.93  E-value=3.9e-25  Score=221.23  Aligned_cols=170  Identities=32%  Similarity=0.567  Sum_probs=147.4

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .++|.+.+.||+|+||.||++.+ .++..|++|.+.....     .....+.+|+.+++.++||||+++++.+...+.+|
T Consensus        18 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~-----~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~   92 (293)
T cd06647          18 KKKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQ-----PKKELIINEILVMRENKHPNIVNYLDSYLVGDELW   92 (293)
T ss_pred             hhhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccc-----hHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEE
Confidence            46899999999999999999987 5788999998753221     12356788999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          407 IFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      +|+||+++++|.+++.+..+++..+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++.......  .
T Consensus        93 lv~e~~~~~~L~~~~~~~~l~~~~~~~i~~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~  172 (293)
T cd06647          93 VVMEYLAGGSLTDVVTETCMDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR  172 (293)
T ss_pred             EEEecCCCCcHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccccc
Confidence            99999999999999988889999999999999999999999999999999999999999999999999886543322  2


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....+++.|+|||++.++
T Consensus       173 ~~~~~~~~y~~PE~~~~~  190 (293)
T cd06647         173 STMVGTPYWMAPEVVTRK  190 (293)
T ss_pred             ccccCChhhcCchhhccC
Confidence            334588999999988654


No 279
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=99.93  E-value=4.4e-25  Score=226.72  Aligned_cols=172  Identities=27%  Similarity=0.399  Sum_probs=142.9

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--  402 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--  402 (504)
                      .+.++|++.+.||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.+++.++|+||++++++|...  
T Consensus        13 ~~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   89 (353)
T cd07850          13 TVLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQ---NVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKS   89 (353)
T ss_pred             hhhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCcccc---ChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCC
Confidence            3567899999999999999999998 5889999998753221   122335567899999999999999999987644  


Q ss_pred             ----CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          403 ----SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       403 ----~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                          ..+|+||||+.+ +|.+++... ++...+..++.||+.||.|||++||+||||||+|||++.++.+||+|||+++.
T Consensus        90 ~~~~~~~~lv~e~~~~-~l~~~~~~~-l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~  167 (353)
T cd07850          90 LEEFQDVYLVMELMDA-NLCQVIQMD-LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART  167 (353)
T ss_pred             ccccCcEEEEEeccCC-CHHHHHhhc-CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEccCcccee
Confidence                357999999975 787777654 89999999999999999999999999999999999999999999999999976


Q ss_pred             cccCC-cccccCCCcccccccccCC
Q 010676          479 TKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       479 ~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..... .....+|..|+|||++.+.
T Consensus       168 ~~~~~~~~~~~~~~~y~aPE~~~~~  192 (353)
T cd07850         168 AGTSFMMTPYVVTRYYRAPEVILGM  192 (353)
T ss_pred             CCCCCCCCCCcccccccCHHHHhCC
Confidence            54332 2334589999999998764


No 280
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=99.93  E-value=4.5e-25  Score=215.88  Aligned_cols=169  Identities=25%  Similarity=0.415  Sum_probs=135.4

Q ss_pred             eeeeeeecccCceeEEEEEccC-Cc--eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC------
Q 010676          331 WQKGDLLGRGSFGSVYEGISDD-GF--FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD------  401 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~~-g~--~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~------  401 (504)
                      |.+++.||+|+||.||+|.+.. +.  .+|+|.+....   ........+.+|+.+++.++|+||+++++++..      
T Consensus         1 ~~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~   77 (272)
T cd05075           1 LALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAI---CTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEG   77 (272)
T ss_pred             CccccccCcccCceEEEeEEccCCCeeeEEEEecccCc---CCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccC
Confidence            3567889999999999998743 32  58899775432   123335678899999999999999999987632      


Q ss_pred             CCeEEEEEEeccCCCHHHHHHh-------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecC
Q 010676          402 ESKLYIFLELVTKGSLLNLYQR-------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG  474 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~-------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFG  474 (504)
                      ....+++|||+.+++|..++..       ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||
T Consensus        78 ~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg  157 (272)
T cd05075          78 YPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFG  157 (272)
T ss_pred             CCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCC
Confidence            2357899999999999987632       237888999999999999999999999999999999999999999999999


Q ss_pred             cccccccCCc----ccccCCCcccccccccCC
Q 010676          475 LAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       475 LA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      +++.......    ....+++.|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  189 (272)
T cd05075         158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADR  189 (272)
T ss_pred             cccccCcccceecCCcccCCcccCCHHHccCC
Confidence            9886543321    122367789999998754


No 281
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=99.93  E-value=5.5e-25  Score=215.65  Aligned_cols=170  Identities=27%  Similarity=0.457  Sum_probs=141.0

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CC---ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DG---FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g---~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ..|++.+.||+|+||.||+|... ++   ..|++|.+....    .......+..|+.+++.++||||+++++++.....
T Consensus         4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~   79 (269)
T cd05065           4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGY----TEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRP   79 (269)
T ss_pred             HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCC----CHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCc
Confidence            46899999999999999999873 33   369999775321    12334678899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +|+||||+.+++|.+++...  .++...+..++.|++.||.|||++|++|+||||+||+++.++.++|+|||++......
T Consensus        80 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~  159 (269)
T cd05065          80 VMIITEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD  159 (269)
T ss_pred             eEEEEecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence            99999999999999988753  4788999999999999999999999999999999999999999999999998754332


Q ss_pred             Cc----c-ccc--CCCcccccccccCC
Q 010676          483 DV----K-SCR--GTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~----~-s~~--GT~~YmAPEVL~g~  502 (504)
                      ..    . ...  .+..|+|||++.++
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~  186 (269)
T cd05065         160 TSDPTYTSSLGGKIPIRWTAPEAIAYR  186 (269)
T ss_pred             ccccccccccCCCcceeecCHhHhccC
Confidence            21    1 111  24579999998753


No 282
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core 
Probab=99.93  E-value=8.3e-25  Score=208.56  Aligned_cols=168  Identities=36%  Similarity=0.666  Sum_probs=148.0

Q ss_pred             ceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|.+.+.||+|+||.||++.+. ++..+++|++.....     .....+.+|+.+++.++|+||+++++++......|++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~   75 (253)
T cd05122           1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESK-----EKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIV   75 (253)
T ss_pred             CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccch-----hHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEE
Confidence            4788899999999999999984 788999998864322     2346788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-cc
Q 010676          409 LELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VK  485 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~~  485 (504)
                      +||+++++|.+++...  .+++..+..++.|++.+|.|||.+|++|+||+|+||+++.++.++|+|||++....... ..
T Consensus        76 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~  155 (253)
T cd05122          76 MEFCSGGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARN  155 (253)
T ss_pred             EecCCCCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeecccccccccccccc
Confidence            9999999999998775  68999999999999999999999999999999999999999999999999987765443 34


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...++..|++||++.+.
T Consensus       156 ~~~~~~~~~~PE~~~~~  172 (253)
T cd05122         156 TMVGTPYWMAPEVINGK  172 (253)
T ss_pred             ceecCCcccCHHHHcCC
Confidence            55689999999998754


No 283
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=99.93  E-value=5.1e-25  Score=217.35  Aligned_cols=170  Identities=26%  Similarity=0.430  Sum_probs=139.6

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCc----eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGF----FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~----~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      ..+|++.+.||+|+||+||+|.+ .++.    .||+|.+.....    ......+.+|+.++..++|+||+++++++.. 
T Consensus         6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~----~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~-   80 (279)
T cd05109           6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTS----PKANKEILDEAYVMAGVGSPYVCRLLGICLT-   80 (279)
T ss_pred             hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCC----HHHHHHHHHHHHHHHhcCCCCCceEEEEEcC-
Confidence            35799999999999999999986 3444    478887753221    2234567889999999999999999999875 


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      ...+++|+|+++|+|.+++...  .+++..+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++...
T Consensus        81 ~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~  160 (279)
T cd05109          81 STVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD  160 (279)
T ss_pred             CCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence            4578999999999999988653  48999999999999999999999999999999999999999999999999988654


Q ss_pred             cCCc----ccccCCCcccccccccCC
Q 010676          481 LNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       481 ~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      ....    ....+++.|||||++.+.
T Consensus       161 ~~~~~~~~~~~~~~~~y~~PE~~~~~  186 (279)
T cd05109         161 IDETEYHADGGKVPIKWMALESILHR  186 (279)
T ss_pred             cccceeecCCCccchhhCCHHHhccC
Confidence            3221    112346789999998654


No 284
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include 
Probab=99.93  E-value=1e-24  Score=216.60  Aligned_cols=170  Identities=31%  Similarity=0.479  Sum_probs=143.9

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC--CCeE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD--ESKL  405 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--~~~l  405 (504)
                      +.|...+.||.|+||.||++.+ .++..+|+|.+.....    ......+.+|+.+++.++||||+++++++..  .+.+
T Consensus         1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~   76 (287)
T cd06621           1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPN----PDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSI   76 (287)
T ss_pred             CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCc----hHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeE
Confidence            3688999999999999999998 5788999998864322    1334567899999999999999999998754  4479


Q ss_pred             EEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          406 YIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      |+||||+++++|.+++..     ..+++..+..++.||+.||.|||+.|++|+||+|.||+++.++.++|+|||++....
T Consensus        77 ~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~  156 (287)
T cd06621          77 GIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV  156 (287)
T ss_pred             EEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence            999999999999887653     347888999999999999999999999999999999999999999999999987655


Q ss_pred             cCCcccccCCCcccccccccCC
Q 010676          481 LNDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       481 ~~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ........++..|+|||++.+.
T Consensus       157 ~~~~~~~~~~~~y~~pE~~~~~  178 (287)
T cd06621         157 NSLAGTFTGTSFYMAPERIQGK  178 (287)
T ss_pred             ccccccccCCccccCHHHhcCC
Confidence            4444445688999999988654


No 285
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=99.93  E-value=1.1e-24  Score=208.63  Aligned_cols=170  Identities=52%  Similarity=0.871  Sum_probs=149.1

Q ss_pred             ceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--CeEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--SKLY  406 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--~~ly  406 (504)
                      +|++.+.||+|+||.||+|.+. ++..+++|++......   ......+.+|+.++++++|+||+++++.+...  ..++
T Consensus         1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (260)
T cd06606           1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDS---EEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLN   77 (260)
T ss_pred             CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccc---hHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEE
Confidence            4788899999999999999985 7999999988654322   33456788999999999999999999999888  8999


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      ++|||+.+++|.+++... .+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        78 lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~  157 (260)
T cd06606          78 IFLEYVSGGSLSSLLKKFGKLPEPVIRKYTRQILEGLAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETG  157 (260)
T ss_pred             EEEEecCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEeccccccc
Confidence            999999999999998765 68999999999999999999999999999999999999999999999999988765443  


Q ss_pred             --cccccCCCcccccccccCC
Q 010676          484 --VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g~  502 (504)
                        .....++..|+|||++.+.
T Consensus       158 ~~~~~~~~~~~y~~pE~~~~~  178 (260)
T cd06606         158 EGTGSVRGTPYWMAPEVIRGE  178 (260)
T ss_pred             ccccCCCCCccccCHhhhcCC
Confidence              3345689999999998754


No 286
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=99.93  E-value=5.6e-25  Score=215.77  Aligned_cols=170  Identities=33%  Similarity=0.499  Sum_probs=142.7

Q ss_pred             cceeeeeeecccCceeEEEEEc-----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC--
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD--  401 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~--  401 (504)
                      +.|++.+.||+|+||.||+|..     .++..+|+|.+......    .....+.+|+.+++.++|+||+++++++..  
T Consensus         4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~   79 (284)
T cd05038           4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEE----QHRSDFEREIEILRTLDHENIVKYKGVCEKPG   79 (284)
T ss_pred             hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccch----HHHHHHHHHHHHHHhCCCCChheEEeeeecCC
Confidence            4678889999999999999985     24789999988643322    345678899999999999999999998877  


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ...+|++|||+++++|.+++....  +++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++...
T Consensus        80 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~  159 (284)
T cd05038          80 GRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVL  159 (284)
T ss_pred             CCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence            567999999999999999997655  899999999999999999999999999999999999999999999999998765


Q ss_pred             ccCCc-----ccccCCCcccccccccCC
Q 010676          480 KLNDV-----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       480 ~~~~~-----~s~~GT~~YmAPEVL~g~  502 (504)
                      .....     ....++..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~  187 (284)
T cd05038         160 PEDKDYYYVKEPGESPIFWYAPECLRTS  187 (284)
T ss_pred             ccCCcceeccCCCCCcccccCcHHHccC
Confidence            52211     122356679999987643


No 287
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs),  (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast 
Probab=99.93  E-value=1e-24  Score=209.76  Aligned_cols=170  Identities=45%  Similarity=0.751  Sum_probs=147.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|.+.+.||+|+||.||++.+ .++..|++|.+......   ......+.+|++++..++|+|++++++++...+.+|++
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (254)
T cd06627           1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIK---EEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYII   77 (254)
T ss_pred             CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccC---HHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEE
Confidence            478899999999999999987 47889999988654322   23456788999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc--c
Q 010676          409 LELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV--K  485 (504)
Q Consensus       409 mEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~--~  485 (504)
                      |||+.+++|.+++.. ..+++..+..++.|++.+|.|||++||+|+||||+||+++.++.++|+|||++........  .
T Consensus        78 ~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~  157 (254)
T cd06627          78 LEYAENGSLRQIIKKFGPFPESLVAVYVYQVLQGLAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDA  157 (254)
T ss_pred             EecCCCCcHHHHHHhccCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccccc
Confidence            999999999998866 4589999999999999999999999999999999999999999999999999886554432  3


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...++..|+|||++.+.
T Consensus       158 ~~~~~~~y~~pe~~~~~  174 (254)
T cd06627         158 SVVGTPYWMAPEVIEMS  174 (254)
T ss_pred             ccccchhhcCHhhhcCC
Confidence            44689999999987654


No 288
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=99.93  E-value=5e-25  Score=217.49  Aligned_cols=170  Identities=30%  Similarity=0.461  Sum_probs=140.0

Q ss_pred             cceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      +.|++.+.||+|+||.||+|.+.      .+..|++|.+.....    ......+.+|+.+++.++|+||+++++++.+.
T Consensus         6 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~   81 (277)
T cd05036           6 DSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCS----EQDESDFLMEALIMSKFNHQNIVRLIGVSFER   81 (277)
T ss_pred             HHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCC----HHHHHHHHHHHHHHHhCCCCCEeeEEEEEccC
Confidence            57899999999999999999884      467888887643221    22235678899999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc--------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC---cEEEE
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY--------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG---SVKLA  471 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~--------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g---~VKL~  471 (504)
                      ...|+||||+.+++|.+++...        .+++..+..++.||+.||.|||+++++|+||||+|||++.++   .+||+
T Consensus        82 ~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~  161 (277)
T cd05036          82 LPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIA  161 (277)
T ss_pred             CCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEec
Confidence            9999999999999999998764        378889999999999999999999999999999999998665   59999


Q ss_pred             ecCcccccccCCc----ccccCCCcccccccccCC
Q 010676          472 DFGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       472 DFGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      |||+++.......    .....+..|||||++.++
T Consensus       162 dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  196 (277)
T cd05036         162 DFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDG  196 (277)
T ss_pred             cCccccccCCccceecCCCCCccHhhCCHHHHhcC
Confidence            9999876532221    112235679999998654


No 289
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=99.93  E-value=4.3e-25  Score=214.30  Aligned_cols=163  Identities=32%  Similarity=0.511  Sum_probs=137.1

Q ss_pred             eeecccCceeEEEEEccC--C--ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEE
Q 010676          335 DLLGRGSFGSVYEGISDD--G--FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~--g--~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      ++||+|+||.||+|.+.+  +  ..||+|.+......    .....+.+|+.++++++|+||+++++.+.. ..+++|||
T Consensus         1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e   75 (257)
T cd05040           1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLS----DIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTE   75 (257)
T ss_pred             CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccH----HHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEE
Confidence            468999999999998732  3  36899977543221    445778899999999999999999999988 89999999


Q ss_pred             eccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC----
Q 010676          411 LVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----  483 (504)
Q Consensus       411 y~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----  483 (504)
                      |+++++|.+++...   .+++..+..++.|++.||.|||++|++|+||||+||+++.++.+||+|||++.......    
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~  155 (257)
T cd05040          76 LAPLGSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV  155 (257)
T ss_pred             ecCCCcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHHhCCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence            99999999988764   37889999999999999999999999999999999999999999999999987654321    


Q ss_pred             -cccccCCCcccccccccCC
Q 010676          484 -VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g~  502 (504)
                       .....++..|+|||++.+.
T Consensus       156 ~~~~~~~~~~y~~pE~~~~~  175 (257)
T cd05040         156 MEEHLKVPFAWCAPESLRTR  175 (257)
T ss_pred             cccCCCCCceecCHHHhccc
Confidence             1223477889999988653


No 290
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the 
Probab=99.93  E-value=3.3e-25  Score=221.48  Aligned_cols=169  Identities=30%  Similarity=0.449  Sum_probs=138.7

Q ss_pred             ceeeeeeecccCceeEEEEEcc---CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--Ce
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD---DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--SK  404 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~---~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--~~  404 (504)
                      .|++.+.||+|+||.||+|.+.   ++..||+|.+......  .......+.+|+.++..++||||+++++++...  ..
T Consensus         1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   78 (316)
T cd07842           1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQ--YTGISQSACREIALLRELKHENVVSLVEVFLEHADKS   78 (316)
T ss_pred             CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEecccccc--ccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCce
Confidence            4788999999999999999983   5899999988753211  111224567899999999999999999999888  88


Q ss_pred             EEEEEEeccCCCHHHHHHh------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC----CCcEEEEecC
Q 010676          405 LYIFLELVTKGSLLNLYQR------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA----NGSVKLADFG  474 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~----~g~VKL~DFG  474 (504)
                      +|+||||+++ +|.+++..      ..+++..++.++.||+.||.|||+++|+||||||+|||++.    ++.+||+|||
T Consensus        79 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg  157 (316)
T cd07842          79 VYLLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLG  157 (316)
T ss_pred             EEEEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCc
Confidence            9999999986 56665532      24788899999999999999999999999999999999999    8999999999


Q ss_pred             cccccccCC-----cccccCCCcccccccccC
Q 010676          475 LAKATKLND-----VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       475 LA~~~~~~~-----~~s~~GT~~YmAPEVL~g  501 (504)
                      ++.......     .....+|..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  189 (316)
T cd07842         158 LARLFNAPLKPLADLDPVVVTIWYRAPELLLG  189 (316)
T ss_pred             cccccCCCcccccccCCccccccccCHHHHhC
Confidence            987643221     223468899999998765


No 291
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex 
Probab=99.93  E-value=5.2e-25  Score=217.11  Aligned_cols=168  Identities=32%  Similarity=0.496  Sum_probs=141.7

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||.|+||.||+|.+ .++..|+||.+.......   .....+.+|+.++++++||||+++++++...+.+|+|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v   77 (284)
T cd07860           1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETE---GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV   77 (284)
T ss_pred             CceeeeeecCCCceEEEEEEECCCCCEEEEEEcccccccc---ccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEE
Confidence            488899999999999999998 578999999876432211   1224677899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          409 LELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      |||+. ++|..++..   ..+++..+..++.|++.||.|||+++++|+||+|+||+++.++.+||+|||++.......  
T Consensus        78 ~e~~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~  156 (284)
T cd07860          78 FEFLH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRT  156 (284)
T ss_pred             eeccc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccc
Confidence            99996 578887754   358889999999999999999999999999999999999999999999999987544322  


Q ss_pred             cccccCCCcccccccccC
Q 010676          484 VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g  501 (504)
                      .....++..|+|||++.+
T Consensus       157 ~~~~~~~~~y~aPE~~~~  174 (284)
T cd07860         157 YTHEVVTLWYRAPEILLG  174 (284)
T ss_pred             cccccccccccCCeEEec
Confidence            233457889999998765


No 292
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of 
Probab=99.93  E-value=6.4e-25  Score=216.74  Aligned_cols=164  Identities=28%  Similarity=0.420  Sum_probs=138.6

Q ss_pred             ecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||+|+||+||+|.+ .+|..|++|.+......  .......+.+|+.+++.++||||+++++++...+.+|+||||++++
T Consensus         1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (277)
T cd05577           1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLK--KRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGG   78 (277)
T ss_pred             CCCCCceeEEEEEEcCCCcEEEEEEEehhhhh--hhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCC
Confidence            69999999999987 57899999988643211  1222345678999999999999999999999999999999999999


Q ss_pred             CHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-CcccccCCC
Q 010676          416 SLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTA  491 (504)
Q Consensus       416 sL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-~~~s~~GT~  491 (504)
                      +|.+++...   .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++...... ......++.
T Consensus        79 ~L~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  158 (277)
T cd05577          79 DLKYHIYNVGEPGFPEARAIFYAAQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRAGTP  158 (277)
T ss_pred             cHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCccccccCCC
Confidence            999888653   4889999999999999999999999999999999999999999999999998754422 223445788


Q ss_pred             cccccccccCC
Q 010676          492 FWMAPEVCSNP  502 (504)
Q Consensus       492 ~YmAPEVL~g~  502 (504)
                      .|+|||++.++
T Consensus       159 ~y~~PE~~~~~  169 (277)
T cd05577         159 GYMAPEVLQGE  169 (277)
T ss_pred             CcCCHHHhcCC
Confidence            99999998654


No 293
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=99.93  E-value=5.1e-25  Score=218.08  Aligned_cols=169  Identities=28%  Similarity=0.418  Sum_probs=141.2

Q ss_pred             cceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      .+|++.++||+|+||.||++..      .++..+++|.+....     ......+.+|+.+++.++|+||+++++++...
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~   79 (280)
T cd05092           5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEAS-----ESARQDFQREAELLTVLQHQHIVRFYGVCTEG   79 (280)
T ss_pred             HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCC-----HHHHHHHHHHHHHHhcCCCCCCceEEEEEecC
Confidence            4678899999999999999963      346688888764321     23345788999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG  466 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g  466 (504)
                      +.+|++|||+.+++|.+++...                .+++..+..++.||+.||.|||++||+|+||||+|||++.++
T Consensus        80 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~nil~~~~~  159 (280)
T cd05092          80 RPLLMVFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLASLHFVHRDLATRNCLVGQGL  159 (280)
T ss_pred             CceEEEEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHHHCCeecccccHhhEEEcCCC
Confidence            9999999999999999988653                377889999999999999999999999999999999999999


Q ss_pred             cEEEEecCcccccccCCc----ccccCCCcccccccccCC
Q 010676          467 SVKLADFGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       467 ~VKL~DFGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      .+||+|||++........    ....+++.|+|||++.+.
T Consensus       160 ~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  199 (280)
T cd05092         160 VVKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYR  199 (280)
T ss_pred             CEEECCCCceeEcCCCceeecCCCccccccccCHHHhccC
Confidence            999999999875433221    122356789999988764


No 294
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=99.93  E-value=7.7e-25  Score=213.53  Aligned_cols=163  Identities=26%  Similarity=0.454  Sum_probs=135.1

Q ss_pred             eecccCceeEEEEEc---cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          336 LLGRGSFGSVYEGIS---DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       336 ~LG~G~FG~VYka~~---~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      .||+|+||.||+|.+   .++..+|+|++.....   .......+.+|+.+++.++|+||+++++++. ...+++||||+
T Consensus         2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~-~~~~~lv~e~~   77 (257)
T cd05116           2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNN---DPALKDELLREANVMQQLDNPYIVRMIGICE-AESWMLVMELA   77 (257)
T ss_pred             cCCCcCCcceEEeEEecCCCceEEEEEEccCCCC---cHHHHHHHHHHHHHHHhCCCCCcceEEEEEc-CCCcEEEEecC
Confidence            589999999999965   4678999998753322   2334567889999999999999999999875 45679999999


Q ss_pred             cCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc-----cc
Q 010676          413 TKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KS  486 (504)
Q Consensus       413 ~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~-----~s  486 (504)
                      ++++|.+++.. ..+++..+..++.|++.||.|||++||+||||||.|||++.++.+||+|||++........     ..
T Consensus        78 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05116          78 ELGPLNKFLQKNKHVTEKNITELVHQVSMGMKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTH  157 (257)
T ss_pred             CCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCC
Confidence            99999998865 4589999999999999999999999999999999999999999999999999876543321     12


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..++..|||||++.+.
T Consensus       158 ~~~~~~y~aPE~~~~~  173 (257)
T cd05116         158 GKWPVKWYAPECMNYY  173 (257)
T ss_pred             CCCCccccCHhHhccC
Confidence            2345789999988653


No 295
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=99.93  E-value=6.8e-25  Score=225.00  Aligned_cols=170  Identities=26%  Similarity=0.447  Sum_probs=144.6

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC--
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES--  403 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~--  403 (504)
                      +.++|++.+.||+|+||.||++.+ .++..||+|++....   ........+.+|+.+++.++|+||+++++++....  
T Consensus        13 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~   89 (343)
T cd07880          13 VPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPF---QSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL   89 (343)
T ss_pred             cccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccc---cchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence            566899999999999999999987 589999999875322   11223356779999999999999999999887654  


Q ss_pred             ----eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          404 ----KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       404 ----~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                          .+|+||+|+ +++|..++....+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+|||++...
T Consensus        90 ~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~  168 (343)
T cd07880          90 DRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQT  168 (343)
T ss_pred             cccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeccccccc
Confidence                468999999 679999988888999999999999999999999999999999999999999999999999998765


Q ss_pred             ccCCcccccCCCcccccccccC
Q 010676          480 KLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       480 ~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      ... .....+++.|+|||++.+
T Consensus       169 ~~~-~~~~~~~~~y~aPE~~~~  189 (343)
T cd07880         169 DSE-MTGYVVTRWYRAPEVILN  189 (343)
T ss_pred             ccC-ccccccCCcccCHHHHhC
Confidence            432 234468999999998865


No 296
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=99.93  E-value=7.6e-25  Score=214.52  Aligned_cols=161  Identities=27%  Similarity=0.460  Sum_probs=132.9

Q ss_pred             ecccCceeEEEEEcc---CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEecc
Q 010676          337 LGRGSFGSVYEGISD---DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVT  413 (504)
Q Consensus       337 LG~G~FG~VYka~~~---~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~  413 (504)
                      ||+|+||.||+|.+.   .+..||+|++....    .......+.+|+.+++.++|+||+++++++. ...+|+||||++
T Consensus         3 ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~----~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~-~~~~~lv~e~~~   77 (257)
T cd05115           3 LGSGNFGCVKKGVYKMRKKQIDVAIKVLKNEN----EKSVRDEMMREAEIMHQLDNPYIVRMIGVCE-AEALMLVMEMAS   77 (257)
T ss_pred             cCCCCcccEEEEEEecCCCceeEEEEEccccc----ChHHHHHHHHHHHHHHhcCCCCeEEEEEEEc-CCCeEEEEEeCC
Confidence            899999999999763   45679999775321    1333466889999999999999999999886 457899999999


Q ss_pred             CCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc-----cc
Q 010676          414 KGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV-----KS  486 (504)
Q Consensus       414 ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~-----~s  486 (504)
                      +++|.+++..  ..+++..++.++.||+.||.|||++|++|+||||+|||++.++.+||+|||++........     ..
T Consensus        78 ~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  157 (257)
T cd05115          78 GGPLNKFLSGKKDEITVSNVVELMHQVSMGMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSA  157 (257)
T ss_pred             CCCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCC
Confidence            9999998864  4589999999999999999999999999999999999999999999999999875433221     11


Q ss_pred             ccCCCcccccccccCC
Q 010676          487 CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       487 ~~GT~~YmAPEVL~g~  502 (504)
                      ..++..|+|||++.++
T Consensus       158 ~~~~~~y~aPE~~~~~  173 (257)
T cd05115         158 GKWPLKWYAPECINFR  173 (257)
T ss_pred             CCCCcccCCHHHHccC
Confidence            2235789999988654


No 297
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=99.93  E-value=3.6e-26  Score=242.22  Aligned_cols=159  Identities=31%  Similarity=0.499  Sum_probs=139.8

Q ss_pred             eeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          333 KGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       333 i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      -++-||.|..|.||+|+.. +..||||.++.            .-+.+|+-|++|+|+||+.|.++|....++|||||||
T Consensus       128 ELeWlGSGaQGAVF~Grl~-netVAVKKV~e------------lkETdIKHLRkLkH~NII~FkGVCtqsPcyCIiMEfC  194 (904)
T KOG4721|consen  128 ELEWLGSGAQGAVFLGRLH-NETVAVKKVRE------------LKETDIKHLRKLKHPNIITFKGVCTQSPCYCIIMEFC  194 (904)
T ss_pred             hhhhhccCcccceeeeecc-CceehhHHHhh------------hhhhhHHHHHhccCcceeeEeeeecCCceeEEeeecc
Confidence            3566999999999999886 56899996642            1236788999999999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-CcccccCC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGT  490 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-~~~s~~GT  490 (504)
                      ..|-|..+++.. .+....+..|..+|+.|+.|||.+.|||||||.-||||..+..|||+|||.++..... ...+++||
T Consensus       195 a~GqL~~VLka~~~itp~llv~Wsk~IA~GM~YLH~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGT  274 (904)
T KOG4721|consen  195 AQGQLYEVLKAGRPITPSLLVDWSKGIAGGMNYLHLHKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGT  274 (904)
T ss_pred             ccccHHHHHhccCccCHHHHHHHHHHhhhhhHHHHHhhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhh
Confidence            999999999765 4888899999999999999999999999999999999999999999999998865433 34567899


Q ss_pred             CcccccccccCCCC
Q 010676          491 AFWMAPEVCSNPFV  504 (504)
Q Consensus       491 ~~YmAPEVL~g~~v  504 (504)
                      ..||||||+.+.-|
T Consensus       275 VaWMAPEvIrnePc  288 (904)
T KOG4721|consen  275 VAWMAPEVIRNEPC  288 (904)
T ss_pred             HhhhCHHHhhcCCc
Confidence            99999999987643


No 298
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2,  and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2.  The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase.  Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=99.93  E-value=7.7e-25  Score=211.23  Aligned_cols=170  Identities=36%  Similarity=0.520  Sum_probs=147.4

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|++.+.||+|+||.||++.+ .++..+++|.+......   ......+.+|+.+++.++|+||+++++++.....+|+|
T Consensus         1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v   77 (256)
T cd08530           1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMS---QKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIV   77 (256)
T ss_pred             CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhcc---HHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEE
Confidence            488899999999999999987 57889999988643322   22345677899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          409 LELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      |||+++++|..++..     ..+++..+..++.|++.||.|||++|++|+||+|.||+++.++.+||+|||++.......
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~  157 (256)
T cd08530          78 MEYAPFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNM  157 (256)
T ss_pred             ehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCC
Confidence            999999999998866     458888999999999999999999999999999999999999999999999998765554


Q ss_pred             cccccCCCcccccccccCC
Q 010676          484 VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....+++.|++||.+.+.
T Consensus       158 ~~~~~~~~~~~~Pe~~~~~  176 (256)
T cd08530         158 AKTQIGTPHYMAPEVWKGR  176 (256)
T ss_pred             cccccCCccccCHHHHCCC
Confidence            4445689999999998764


No 299
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=99.93  E-value=8.9e-25  Score=211.34  Aligned_cols=164  Identities=28%  Similarity=0.481  Sum_probs=138.6

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccC
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTK  414 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~g  414 (504)
                      ++||+|+||.||++.+.++..|++|.+......    .....+.+|+.++++++|+||+++++++......|+||||+.+
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~----~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~   76 (251)
T cd05041           1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPP----DLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPG   76 (251)
T ss_pred             CccccCCCceEEEEEEeCCCcEEEEeccccCCH----HHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCC
Confidence            469999999999999866999999987643322    2345788999999999999999999999999999999999999


Q ss_pred             CCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc----ccc
Q 010676          415 GSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK----SCR  488 (504)
Q Consensus       415 gsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~----s~~  488 (504)
                      ++|.+++...  .++...+..++.|++.+|.|||+++++||||||+|||++.++.++|+|||++.........    ...
T Consensus        77 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  156 (251)
T cd05041          77 GSLLTFLRKKKNRLTVKKLLQMSLDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ  156 (251)
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence            9999988653  4788889999999999999999999999999999999999999999999998754422211    122


Q ss_pred             CCCcccccccccCC
Q 010676          489 GTAFWMAPEVCSNP  502 (504)
Q Consensus       489 GT~~YmAPEVL~g~  502 (504)
                      ++..|+|||++.++
T Consensus       157 ~~~~y~~PE~~~~~  170 (251)
T cd05041         157 IPIKWTAPEALNYG  170 (251)
T ss_pred             ceeccCChHhhccC
Confidence            35679999998764


No 300
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=99.93  E-value=6.6e-25  Score=220.29  Aligned_cols=171  Identities=30%  Similarity=0.492  Sum_probs=141.8

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--C
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--S  403 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--~  403 (504)
                      ..++|++.+.||+|+||.||+|.+ .+|..||+|.+........   ....+.+|+.++++++|+||+++++++...  +
T Consensus         5 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~---~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~   81 (309)
T cd07845           5 SVTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDG---IPISSLREITLLLNLRHPNIVELKEVVVGKHLD   81 (309)
T ss_pred             cccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCC---CcchhhHHHHHHHhCCCCCCcceEEEEecCCCC
Confidence            456899999999999999999998 5789999998864332211   112356799999999999999999988654  5


Q ss_pred             eEEEEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      .+|+||||+.+ +|.+++..  ..+++..+..++.||+.||.|||++||+|+||||+||+++.++.+||+|||++.....
T Consensus        82 ~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~  160 (309)
T cd07845          82 SIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLMLQLLRGLQYLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL  160 (309)
T ss_pred             eEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence            68999999975 78887765  4588999999999999999999999999999999999999999999999999876543


Q ss_pred             C--CcccccCCCcccccccccC
Q 010676          482 N--DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       482 ~--~~~s~~GT~~YmAPEVL~g  501 (504)
                      .  ......+++.|+|||++.+
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~  182 (309)
T cd07845         161 PAKPMTPKVVTLWYRAPELLLG  182 (309)
T ss_pred             ccCCCCcccccccccChhhhcC
Confidence            3  2233346888999999864


No 301
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They 
Probab=99.93  E-value=1.1e-24  Score=209.26  Aligned_cols=170  Identities=33%  Similarity=0.615  Sum_probs=146.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|.+.+.||.|+||.||++.+ .++..|++|++......   ......+.+|+.+++.++|+|++++++.+.....+++|
T Consensus         1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv   77 (258)
T cd08215           1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMS---EKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIV   77 (258)
T ss_pred             CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCC---hHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEE
Confidence            488899999999999999998 47899999988653322   23345678999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          409 LELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      |||+++++|.+++..     ..+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......
T Consensus        78 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~  157 (258)
T cd08215          78 MEYADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTV  157 (258)
T ss_pred             EEecCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCc
Confidence            999999999998865     458999999999999999999999999999999999999999999999999987654332


Q ss_pred             --cccccCCCcccccccccCC
Q 010676          484 --VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g~  502 (504)
                        .....|++.|+|||++.+.
T Consensus       158 ~~~~~~~~~~~y~~pe~~~~~  178 (258)
T cd08215         158 DLAKTVVGTPYYLSPELCQNK  178 (258)
T ss_pred             ceecceeeeecccChhHhccC
Confidence              2334689999999987654


No 302
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=99.93  E-value=9.5e-25  Score=212.79  Aligned_cols=164  Identities=31%  Similarity=0.456  Sum_probs=141.1

Q ss_pred             ecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||.|+||.||+|.+ .++..+++|++......  .......+.+|+.+++.++|+||+++++.+..+..+|++|||++++
T Consensus         1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (262)
T cd05572           1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIV--ETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGG   78 (262)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEEehhcch--hhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCC
Confidence            69999999999998 46899999988643321  1223467889999999999999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-cccccCCCcc
Q 010676          416 SLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKSCRGTAFW  493 (504)
Q Consensus       416 sL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~~s~~GT~~Y  493 (504)
                      +|.+++.+. .++...+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++....... .....++..|
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~  158 (262)
T cd05572          79 ELWTILRDRGLFDEYTARFYIACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTPEY  158 (262)
T ss_pred             cHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCcCc
Confidence            999988764 47889999999999999999999999999999999999999999999999988655432 2334689999


Q ss_pred             cccccccCC
Q 010676          494 MAPEVCSNP  502 (504)
Q Consensus       494 mAPEVL~g~  502 (504)
                      ++||++.+.
T Consensus       159 ~~PE~~~~~  167 (262)
T cd05572         159 VAPEIILNK  167 (262)
T ss_pred             cChhHhcCC
Confidence            999998654


No 303
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=99.93  E-value=1.3e-24  Score=215.63  Aligned_cols=171  Identities=33%  Similarity=0.597  Sum_probs=142.7

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCC
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDE  402 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~  402 (504)
                      ....++|.+.+.||+|+||.||++.. .++..+|+|.+....      .....+.+|+.++.++ +||||+++++++...
T Consensus        18 ~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~------~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~   91 (291)
T cd06639          18 GDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS------DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKA   91 (291)
T ss_pred             CCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc------cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEec
Confidence            34567899999999999999999998 578899999875321      1124567889999988 799999999988643


Q ss_pred             -----CeEEEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          403 -----SKLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       403 -----~~lyLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                           ..+|+||||+++++|.++++.     ..+.+..+..++.|++.||.|||+++|+|+||||+||+++.++.+||+|
T Consensus        92 ~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~d  171 (291)
T cd06639          92 DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVD  171 (291)
T ss_pred             cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEee
Confidence                 468999999999999988752     3588899999999999999999999999999999999999999999999


Q ss_pred             cCcccccccCC--cccccCCCcccccccccC
Q 010676          473 FGLAKATKLND--VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       473 FGLA~~~~~~~--~~s~~GT~~YmAPEVL~g  501 (504)
                      ||++.......  .....|+..|+|||++.+
T Consensus       172 fg~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  202 (291)
T cd06639         172 FGVSAQLTSTRLRRNTSVGTPFWMAPEVIAC  202 (291)
T ss_pred             cccchhcccccccccCccCCccccChhhhcC
Confidence            99987644322  223468999999998753


No 304
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=99.93  E-value=9.5e-25  Score=215.39  Aligned_cols=169  Identities=27%  Similarity=0.456  Sum_probs=140.0

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CCc----eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DGF----FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g~----~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      .+|++.+.||+|+||.||+|.+. +|.    .+++|.+.....    ......+.+|+.++..++|+||+++++++.. .
T Consensus         7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~   81 (279)
T cd05057           7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETS----PKANKEILDEAYVMASVDHPHVVRLLGICLS-S   81 (279)
T ss_pred             HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCC----HHHHHHHHHHHHHHHhCCCCCcceEEEEEec-C
Confidence            57899999999999999999863 333    578886643221    3344678899999999999999999999887 7


Q ss_pred             eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      ..++||||+.+++|.+++...  .+++..+..++.||+.||.|||+++|+|+||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~  161 (279)
T cd05057          82 QVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV  161 (279)
T ss_pred             ceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence            899999999999999988764  488999999999999999999999999999999999999999999999999876543


Q ss_pred             CCc----ccccCCCcccccccccCC
Q 010676          482 NDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      ...    ....++..|+|||.+.++
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~  186 (279)
T cd05057         162 DEKEYHAEGGKVPIKWMALESILHR  186 (279)
T ss_pred             cccceecCCCcccccccCHHHhhcC
Confidence            221    112245679999988653


No 305
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=99.93  E-value=1.4e-24  Score=212.75  Aligned_cols=163  Identities=42%  Similarity=0.657  Sum_probs=137.6

Q ss_pred             eeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          334 GDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ...||+|+||.||+|.+ .++..|++|.+....     ....+.+.+|+.+++.++|+||+++++++..++.+|+||||+
T Consensus        13 ~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~   87 (268)
T cd06624          13 RVVLGKGTYGIVYAARDLSTQVRIAIKEIPERD-----SRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIFMEQV   87 (268)
T ss_pred             eEEEecCCceEEEEeEecCCCcEEEEEEecCCC-----HHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEEEecC
Confidence            35799999999999997 577889999875422     223457889999999999999999999999999999999999


Q ss_pred             cCCCHHHHHHhc--CC--ChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-CCcEEEEecCcccccccCC--cc
Q 010676          413 TKGSLLNLYQRY--HL--RDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKLND--VK  485 (504)
Q Consensus       413 ~ggsL~~ll~~~--~l--~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-~g~VKL~DFGLA~~~~~~~--~~  485 (504)
                      ++++|.+++...  .+  .+..+..++.||+.||.|||++||+|+||||+|||++. ++.++|+|||++.......  ..
T Consensus        88 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~  167 (268)
T cd06624          88 PGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTE  167 (268)
T ss_pred             CCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccc
Confidence            999999988753  34  77888899999999999999999999999999999976 6799999999987543222  22


Q ss_pred             cccCCCcccccccccC
Q 010676          486 SCRGTAFWMAPEVCSN  501 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g  501 (504)
                      ...|++.|+|||++.+
T Consensus       168 ~~~~~~~~~aPE~~~~  183 (268)
T cd06624         168 TFTGTLQYMAPEVIDK  183 (268)
T ss_pred             cCCCCccccChhhhcc
Confidence            3458999999999854


No 306
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=99.92  E-value=5e-25  Score=215.29  Aligned_cols=172  Identities=32%  Similarity=0.544  Sum_probs=146.8

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLY  406 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~ly  406 (504)
                      ++|++.+.||+|+||.||+|.+ .++..|++|++......  .......+.+|+.++++++ |+||+++++++...+.+|
T Consensus         1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~   78 (280)
T cd05581           1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLI--KEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLY   78 (280)
T ss_pred             CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhcc--chHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEE
Confidence            3689999999999999999998 58999999987643221  1222356778999999998 999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      +||||+.+++|.+++... .+++..+..++.|++.||.|||++|++|+||+|+||+++.++.++|+|||++.......  
T Consensus        79 lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~~ql~~~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~  158 (280)
T cd05581          79 FVLEYAPNGELLQYIRKYGSLDEKCTRFYAAEILLALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSP  158 (280)
T ss_pred             EEEcCCCCCcHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCcccc
Confidence            999999999999988776 68999999999999999999999999999999999999999999999999987543322  


Q ss_pred             --------------------cccccCCCcccccccccCC
Q 010676          484 --------------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --------------------~~s~~GT~~YmAPEVL~g~  502 (504)
                                          .....++..|+|||++.+.
T Consensus       159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~  197 (280)
T cd05581         159 ESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEK  197 (280)
T ss_pred             ccCCCCCccccccccccccccccccCCccccCHHHhCCC
Confidence                                1233578999999987654


No 307
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=99.92  E-value=7.2e-25  Score=214.96  Aligned_cols=167  Identities=31%  Similarity=0.549  Sum_probs=141.9

Q ss_pred             eeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--CeEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--SKLYI  407 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--~~lyL  407 (504)
                      |++.+.||.|+||.||+|.+. ++..+++|.+.....   .......+.+|+.+++.++|+|++++++++...  ..+|+
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~l   77 (287)
T cd07840           1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENE---KEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYM   77 (287)
T ss_pred             CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccc---cccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEE
Confidence            678899999999999999984 689999999875431   112234577899999999999999999999888  89999


Q ss_pred             EEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--
Q 010676          408 FLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--  483 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--  483 (504)
                      ||||+++ +|..++...  .+++..+..++.||+.||.|||++|++|+||||+|||++.++.++|+|||++.......  
T Consensus        78 v~e~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~  156 (287)
T cd07840          78 VFEYMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSA  156 (287)
T ss_pred             Eeccccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCcc
Confidence            9999985 888887654  68999999999999999999999999999999999999999999999999987654432  


Q ss_pred             -cccccCCCcccccccccC
Q 010676          484 -VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g  501 (504)
                       .....++..|+|||++.+
T Consensus       157 ~~~~~~~~~~y~~PE~~~~  175 (287)
T cd07840         157 DYTNRVITLWYRPPELLLG  175 (287)
T ss_pred             cccccccccccCCceeeEc
Confidence             233457889999998754


No 308
>PF07714 Pkinase_Tyr:  Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain;  InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []:   Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction [].      Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases [].  ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=99.92  E-value=3.6e-25  Score=217.63  Aligned_cols=167  Identities=31%  Similarity=0.468  Sum_probs=137.0

Q ss_pred             eeeeeecccCceeEEEEEcc-----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          332 QKGDLLGRGSFGSVYEGISD-----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       332 ~i~k~LG~G~FG~VYka~~~-----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .+.+.||.|.||.||+|...     .+..|+||.+...    ........+.+|+.++++++||||+++++++.....++
T Consensus         2 ~~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~   77 (259)
T PF07714_consen    2 KLIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPS----SSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLF   77 (259)
T ss_dssp             EEEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTT----SSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEE
T ss_pred             EEeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccc----cccccceeeeeccccccccccccccccccccccccccc
Confidence            46788999999999999875     4678899988431    22233577889999999999999999999999888899


Q ss_pred             EEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          407 IFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +||||+++|+|.+++...   .+++..+..|+.||+.||.|||+++|+|++|+++|||++.++.+||+|||++.......
T Consensus        78 lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~  157 (259)
T PF07714_consen   78 LVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKS  157 (259)
T ss_dssp             EEEE--TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSS
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            999999999999999876   68999999999999999999999999999999999999999999999999987652221


Q ss_pred             ----cccccCCCcccccccccCC
Q 010676          484 ----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ----~~s~~GT~~YmAPEVL~g~  502 (504)
                          .........|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~~~~aPE~~~~~  180 (259)
T PF07714_consen  158 KYKNDSSQQLPLRYLAPEVLKDG  180 (259)
T ss_dssp             SEEESTTSESGGGGS-HHHHHHS
T ss_pred             ccccccccccccccccccccccc
Confidence                1233467789999998643


No 309
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=99.92  E-value=5.1e-25  Score=212.75  Aligned_cols=164  Identities=32%  Similarity=0.557  Sum_probs=140.4

Q ss_pred             ecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||.|+||.||++.+. ++..+++|.+.....  ........+.+|+.+++.++|+||+++++.+.....+|++|||+.++
T Consensus         1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~   78 (265)
T cd05579           1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADM--IRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGG   78 (265)
T ss_pred             CCCCCceEEEEEEECCCCCEEEEEEecchhh--hhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCC
Confidence            689999999999985 699999998854322  22344567889999999999999999999999999999999999999


Q ss_pred             CHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC----------Cc
Q 010676          416 SLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN----------DV  484 (504)
Q Consensus       416 sL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~----------~~  484 (504)
                      +|.+++.. ..+++..+..++.||+.||.|||+++++|+||+|+||+++.++.++|+|||++......          ..
T Consensus        79 ~L~~~l~~~~~~~~~~~~~i~~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  158 (265)
T cd05579          79 DLASLLENVGSLDEDVARIYIAEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEKED  158 (265)
T ss_pred             cHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccccc
Confidence            99998876 45899999999999999999999999999999999999999999999999998754332          12


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      ....++..|+|||++.+.
T Consensus       159 ~~~~~~~~~~~Pe~~~~~  176 (265)
T cd05579         159 KRIVGTPDYIAPEVILGQ  176 (265)
T ss_pred             cCcccCccccCHHHhcCC
Confidence            334588899999987653


No 310
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It 
Probab=99.92  E-value=8.5e-25  Score=215.53  Aligned_cols=171  Identities=27%  Similarity=0.349  Sum_probs=142.4

Q ss_pred             ccceeeeeeecccCceeEEEEEccC-----CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDD-----GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~-----g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-  401 (504)
                      .++|++.+.||+|+||.||+|.+..     +..|++|.+...    ........+.+|+.+++.++|+||+++++++.. 
T Consensus         5 ~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~----~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~   80 (280)
T cd05043           5 RDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDH----ASEIQVTLLLQESCLLYGLSHQNILPILHVCIED   80 (280)
T ss_pred             hhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCC----CCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecC
Confidence            3579999999999999999999854     788899876522    123335668899999999999999999998665 


Q ss_pred             CCeEEEEEEeccCCCHHHHHHh---------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          402 ESKLYIFLELVTKGSLLNLYQR---------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~---------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                      ....+++++|+.+++|.+++..         ..+++..+..++.||+.||.|||+++++|+||||+|||++.++.+||+|
T Consensus        81 ~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d  160 (280)
T cd05043          81 GEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITD  160 (280)
T ss_pred             CCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECC
Confidence            5678999999999999998865         3478899999999999999999999999999999999999999999999


Q ss_pred             cCcccccccCCc----ccccCCCcccccccccCC
Q 010676          473 FGLAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       473 FGLA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      ||+++.+.....    ....++..|+|||++.+.
T Consensus       161 ~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~  194 (280)
T cd05043         161 NALSRDLFPMDYHCLGDNENRPVKWMALESLVNK  194 (280)
T ss_pred             CCCcccccCCceEEeCCCCCcchhccCHHHHhcC
Confidence            999976543321    123467789999988654


No 311
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=99.92  E-value=6.5e-26  Score=227.69  Aligned_cols=168  Identities=32%  Similarity=0.525  Sum_probs=143.0

Q ss_pred             ccceee-eeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCe
Q 010676          328 ITYWQK-GDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESK  404 (504)
Q Consensus       328 ~~~y~i-~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~  404 (504)
                      .+.|++ .+.||+|.|+.|--+++ .+|..||||++.+.     ......++.+|++++.+++ |+||++|+++|+++..
T Consensus        76 ~d~YkLt~e~LGeGAyasVqtcv~i~t~~EYAVKiidKq-----~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd~~  150 (463)
T KOG0607|consen   76 EDMYKLTSELLGEGAYASVQTCVSIQTGKEYAVKIIDKQ-----PGHSRSRVFREVETFYQCQGHKNILQLIEFFEDDTR  150 (463)
T ss_pred             HHHHHhHHHHhcCccceeeeeeeeeccchhhhhhhhhcC-----CchHHHHHHHHHHHHHHhcCCccHHHHHHHhcccce
Confidence            344554 47899999999999987 79999999998653     2344567889999999997 9999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCc---EEEEecCcccccc
Q 010676          405 LYIFLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS---VKLADFGLAKATK  480 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~-~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~---VKL~DFGLA~~~~  480 (504)
                      +|||||-|.||.|...++ +..|++.++.++.+.|+.||.|||.+||.||||||+|||......   ||||||.|..-+.
T Consensus       151 FYLVfEKm~GGplLshI~~~~~F~E~EAs~vvkdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k  230 (463)
T KOG0607|consen  151 FYLVFEKMRGGPLLSHIQKRKHFNEREASRVVKDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIK  230 (463)
T ss_pred             EEEEEecccCchHHHHHHHhhhccHHHHHHHHHHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccc
Confidence            999999999999988765 456999999999999999999999999999999999999976544   8999999976544


Q ss_pred             cCC---------cccccCCCccccccccc
Q 010676          481 LND---------VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       481 ~~~---------~~s~~GT~~YmAPEVL~  500 (504)
                      .+.         ..+.+|+..||||||+.
T Consensus       231 ~~~~~spastP~L~tPvGSAEfMAPEVVd  259 (463)
T KOG0607|consen  231 LNNDCSPASTPELLTPVGSAEFMAPEVVD  259 (463)
T ss_pred             cCCCCCCCCCccccCcccchhhcchhHHh
Confidence            332         23457899999999864


No 312
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=99.92  E-value=1.1e-24  Score=214.99  Aligned_cols=167  Identities=32%  Similarity=0.628  Sum_probs=140.8

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeec-----
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDK-----  400 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~-----  400 (504)
                      .+.|++.+.||.|+||.||+|.+ .++..+|+|++....      .....+..|+.++..+ +|+||+++++++.     
T Consensus        15 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~------~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~   88 (282)
T cd06636          15 AGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTE------DEEEEIKLEINMLKKYSHHRNIATYYGAFIKKSPP   88 (282)
T ss_pred             hhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecCh------HHHHHHHHHHHHHHHhcCCCcEEEEeeehhccccc
Confidence            35788899999999999999998 678899999875421      2234577899999888 6999999999885     


Q ss_pred             -CCCeEEEEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          401 -DESKLYIFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       401 -~~~~lyLVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                       ..+.+|++|||+.+++|.+++...   .+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++
T Consensus        89 ~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~  168 (282)
T cd06636          89 GHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVS  168 (282)
T ss_pred             CCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcch
Confidence             356799999999999999988653   3788889999999999999999999999999999999999999999999998


Q ss_pred             ccccc--CCcccccCCCccccccccc
Q 010676          477 KATKL--NDVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       477 ~~~~~--~~~~s~~GT~~YmAPEVL~  500 (504)
                      .....  .......|++.|+|||++.
T Consensus       169 ~~~~~~~~~~~~~~~~~~y~aPE~l~  194 (282)
T cd06636         169 AQLDRTVGRRNTFIGTPYWMAPEVIA  194 (282)
T ss_pred             hhhhccccCCCcccccccccCHhhcC
Confidence            75432  2233456899999999875


No 313
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=99.92  E-value=9.3e-25  Score=214.81  Aligned_cols=159  Identities=25%  Similarity=0.393  Sum_probs=131.0

Q ss_pred             eeecccCceeEEEEEccC-------------CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          335 DLLGRGSFGSVYEGISDD-------------GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~-------------g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      +.||+|+||.||+|+...             ...+++|.+...     .......+.+|+.++..++||||+++++++..
T Consensus         1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~   75 (262)
T cd05077           1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPS-----HRDISLAFFETASMMRQVSHKHIVLLYGVCVR   75 (262)
T ss_pred             CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChh-----hhhHHHHHHHHHHHHHhCCCCCEeeEEEEEec
Confidence            368999999999998521             235777765431     12233567788999999999999999999999


Q ss_pred             CCeEEEEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCc-------EEEEe
Q 010676          402 ESKLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS-------VKLAD  472 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~-------VKL~D  472 (504)
                      ....++||||+++++|..++..  ..+++..+..++.||+.||.|||+++|+||||||+|||++.++.       ++|+|
T Consensus        76 ~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d  155 (262)
T cd05077          76 DVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSD  155 (262)
T ss_pred             CCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCC
Confidence            9999999999999999988864  34899999999999999999999999999999999999987664       89999


Q ss_pred             cCcccccccCCcccccCCCccccccccc
Q 010676          473 FGLAKATKLNDVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       473 FGLA~~~~~~~~~s~~GT~~YmAPEVL~  500 (504)
                      ||++......  ....++..|||||++.
T Consensus       156 ~g~~~~~~~~--~~~~~~~~y~aPE~~~  181 (262)
T cd05077         156 PGIPITVLSR--QECVERIPWIAPECVE  181 (262)
T ss_pred             CCCCccccCc--ccccccccccChhhhc
Confidence            9998654322  2345888999999886


No 314
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=99.92  E-value=7.6e-25  Score=212.87  Aligned_cols=165  Identities=30%  Similarity=0.564  Sum_probs=138.6

Q ss_pred             ccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      .+.|++.+.||+|+||.||++.. ++..||+|.+....       ....+.+|+.++..++||||+++++++..+ .+|+
T Consensus         5 ~~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~-------~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~   75 (254)
T cd05083           5 LQKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV-------TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYI   75 (254)
T ss_pred             HHHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc-------hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEE
Confidence            36799999999999999999874 67789999875321       124678899999999999999999998654 5799


Q ss_pred             EEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCc
Q 010676          408 FLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDV  484 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~  484 (504)
                      +|||+.+++|.+++...   .+++..+..++.|++.||.|||++|++||||||+|||++.++.+||+|||++...... .
T Consensus        76 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~-~  154 (254)
T cd05083          76 VMELMSKGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMG-V  154 (254)
T ss_pred             EEECCCCCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceecccc-C
Confidence            99999999999988754   3788889999999999999999999999999999999999999999999998754322 2


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      .....+..|+|||++.++
T Consensus       155 ~~~~~~~~y~~pe~~~~~  172 (254)
T cd05083         155 DNSKLPVKWTAPEALKHK  172 (254)
T ss_pred             CCCCCCceecCHHHhccC
Confidence            223346779999988754


No 315
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=99.92  E-value=1.3e-24  Score=213.10  Aligned_cols=169  Identities=30%  Similarity=0.454  Sum_probs=138.9

Q ss_pred             cceeeeeeecccCceeEEEEEccC----CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDD----GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~----g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      .+|.+.+.||+|+||.||+|.+.+    ...+++|.+.....    ....+.+.+|+.+++.++|+||+++++++.. ..
T Consensus         6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~----~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~   80 (270)
T cd05056           6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTS----PSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NP   80 (270)
T ss_pred             hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCC----HHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CC
Confidence            468899999999999999998633    34688887753221    2334578899999999999999999998875 56


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .|+||||+++++|.+++...  .+++..+..++.||+.||.|||++|++|+||||+|||++.++.++|+|||+++.....
T Consensus        81 ~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~  160 (270)
T cd05056          81 VWIVMELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE  160 (270)
T ss_pred             cEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence            78999999999999998764  3789999999999999999999999999999999999999999999999998765433


Q ss_pred             Cc---ccccCCCcccccccccCC
Q 010676          483 DV---KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~---~s~~GT~~YmAPEVL~g~  502 (504)
                      ..   ....++..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~  183 (270)
T cd05056         161 SYYKASKGKLPIKWMAPESINFR  183 (270)
T ss_pred             cceecCCCCccccccChhhhccC
Confidence            21   112245679999988654


No 316
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=99.92  E-value=6.9e-25  Score=217.36  Aligned_cols=170  Identities=26%  Similarity=0.405  Sum_probs=141.4

Q ss_pred             cceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      ++|++.+.||+|+||.||+|...      ++..||+|.+....    .......+.+|+.+++.++||||+++++++..+
T Consensus         5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~   80 (288)
T cd05050           5 NNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEA----SADMQADFQREAALMAEFDHPNIVKLLGVCAVG   80 (288)
T ss_pred             HhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCc----CHHHHHHHHHHHHHHHhcCCCchheEEEEEcCC
Confidence            57899999999999999999863      56789999775321    123345688999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc-----------------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY-----------------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCAN  459 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~-----------------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~N  459 (504)
                      +.+|+||||+++++|.+++...                       .+++..+..++.||+.||.|||.++++||||||+|
T Consensus        81 ~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH~~~i~H~dl~p~n  160 (288)
T cd05050          81 KPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLSERKFVHRDLATRN  160 (288)
T ss_pred             CccEEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCeecccccHhh
Confidence            9999999999999999988642                       25677889999999999999999999999999999


Q ss_pred             EEEcCCCcEEEEecCcccccccCC----cccccCCCcccccccccCC
Q 010676          460 ILVDANGSVKLADFGLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       460 ILLd~~g~VKL~DFGLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ||++.++.++|+|||++.......    ......+..|+|||++.++
T Consensus       161 il~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  207 (288)
T cd05050         161 CLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYN  207 (288)
T ss_pred             eEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcC
Confidence            999999999999999987543221    1122356679999987653


No 317
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored 
Probab=99.92  E-value=1.3e-24  Score=212.45  Aligned_cols=170  Identities=28%  Similarity=0.445  Sum_probs=140.5

Q ss_pred             cceeeeeeecccCceeEEEEEcc-CC---ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD-DG---FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~-~g---~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ..|...+.||+|+||.||+|... ++   ..+++|.+.....    ......+.+|+.++..++|+||+++++++...+.
T Consensus         5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~----~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~   80 (268)
T cd05063           5 SHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYT----EKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKP   80 (268)
T ss_pred             HHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCC----HHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCC
Confidence            46888899999999999999873 33   3688887753211    2224568899999999999999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +|+||||+.+++|.+++...  .+++..+..++.|++.||.|||++||+|+||||+||+++.++.+||+|||++......
T Consensus        81 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~  160 (268)
T cd05063          81 AMIITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDD  160 (268)
T ss_pred             cEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccc
Confidence            99999999999999988653  4888999999999999999999999999999999999999999999999998754322


Q ss_pred             Ccc-----cccCCCcccccccccCC
Q 010676          483 DVK-----SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~-----s~~GT~~YmAPEVL~g~  502 (504)
                      ...     ....+..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~~~y~~PE~~~~~  185 (268)
T cd05063         161 PEGTYTTSGGKIPIRWTAPEAIAYR  185 (268)
T ss_pred             cccceeccCCCcCceecCHHHhhcC
Confidence            211     11234579999988754


No 318
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=99.92  E-value=1.3e-24  Score=215.95  Aligned_cols=169  Identities=30%  Similarity=0.473  Sum_probs=139.4

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ++|++.+.||+|+||.||+|.+ .++..|++|.+......   ......+.+|+.+++.++|+||+++++++.....+|+
T Consensus         2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   78 (294)
T PLN00009          2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQED---EGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYL   78 (294)
T ss_pred             CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhcccc---ccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEE
Confidence            5799999999999999999998 47889999987543221   1223457789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-CCcEEEEecCcccccccC-
Q 010676          408 FLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKLN-  482 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-~g~VKL~DFGLA~~~~~~-  482 (504)
                      ||||+++ +|.+++....   +++..+..++.||+.||.|||+++|+|+||+|+||+++. ++.+||+|||++...... 
T Consensus        79 v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~  157 (294)
T PLN00009         79 VFEYLDL-DLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPV  157 (294)
T ss_pred             EEecccc-cHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCc
Confidence            9999975 7777665432   577888899999999999999999999999999999985 567999999998754322 


Q ss_pred             -CcccccCCCcccccccccC
Q 010676          483 -DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 -~~~s~~GT~~YmAPEVL~g  501 (504)
                       ......+++.|+|||++.+
T Consensus       158 ~~~~~~~~~~~y~~PE~~~~  177 (294)
T PLN00009        158 RTFTHEVVTLWYRAPEILLG  177 (294)
T ss_pred             cccccCceeecccCHHHHhC
Confidence             2233457899999998865


No 319
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=99.92  E-value=1.8e-24  Score=210.55  Aligned_cols=163  Identities=27%  Similarity=0.453  Sum_probs=134.4

Q ss_pred             eeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEE
Q 010676          335 DLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      +.||+|+||.||+|...    .+..+|+|.+......    .....+.+|+.+++.+.|+||+++++++. .+.+++|||
T Consensus         1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e   75 (257)
T cd05060           1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIA----AGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVME   75 (257)
T ss_pred             CccCccCceeEEEeEeeccCCCcceEEEEecccccch----HHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEE
Confidence            46999999999999762    2368999987643221    23456889999999999999999999876 456899999


Q ss_pred             eccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc----
Q 010676          411 LVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK----  485 (504)
Q Consensus       411 y~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~----  485 (504)
                      |+.+++|.+++.... +++..+..++.|++.+|.|||.++++|+||||+|||++.++.+||+|||+++........    
T Consensus        76 ~~~~~~L~~~l~~~~~~~~~~~~~~~~qi~~~l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~  155 (257)
T cd05060          76 LAPLGPLLKYLKKRREIPVSDLKELAHQVAMGMAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRAT  155 (257)
T ss_pred             eCCCCcHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccc
Confidence            999999999987655 899999999999999999999999999999999999999999999999998765433211    


Q ss_pred             -cccCCCcccccccccCC
Q 010676          486 -SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 -s~~GT~~YmAPEVL~g~  502 (504)
                       ...++..|+|||.+.+.
T Consensus       156 ~~~~~~~~y~aPE~~~~~  173 (257)
T cd05060         156 TAGRWPLKWYAPECINYG  173 (257)
T ss_pred             cCccccccccCHHHhcCC
Confidence             11135679999988764


No 320
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=99.92  E-value=1.4e-24  Score=215.30  Aligned_cols=169  Identities=28%  Similarity=0.449  Sum_probs=138.4

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCe--
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESK--  404 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~--  404 (504)
                      ++|++.+.||+|+||.||+|.+ .++..||+|.+......   ......+.+|+.+++.+. |+||+++++++...+.  
T Consensus         1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~---~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~   77 (295)
T cd07837           1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDE---EGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNG   77 (295)
T ss_pred             CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccc---cCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCC
Confidence            3689999999999999999998 57899999987543211   112245778999999995 6999999998877665  


Q ss_pred             ---EEEEEEeccCCCHHHHHHh------cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-CCcEEEEecC
Q 010676          405 ---LYIFLELVTKGSLLNLYQR------YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-NGSVKLADFG  474 (504)
Q Consensus       405 ---lyLVmEy~~ggsL~~ll~~------~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-~g~VKL~DFG  474 (504)
                         +|+||||+++ +|.+++..      ..+++..+..++.||+.||.|||++||+||||||+|||++. ++.+||+|||
T Consensus        78 ~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg  156 (295)
T cd07837          78 KPSLYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLG  156 (295)
T ss_pred             CceEEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecc
Confidence               8999999986 78777643      23788999999999999999999999999999999999998 8999999999


Q ss_pred             cccccccC--CcccccCCCcccccccccC
Q 010676          475 LAKATKLN--DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       475 LA~~~~~~--~~~s~~GT~~YmAPEVL~g  501 (504)
                      ++......  ......+++.|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~aPE~~~~  185 (295)
T cd07837         157 LGRAFSIPVKSYTHEIVTLWYRAPEVLLG  185 (295)
T ss_pred             cceecCCCccccCCcccccCCCChHHhhC
Confidence            98754322  2233357889999998764


No 321
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=99.92  E-value=1.1e-24  Score=215.86  Aligned_cols=159  Identities=21%  Similarity=0.295  Sum_probs=129.5

Q ss_pred             eecccCceeEEEEEcc-------------------------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCC
Q 010676          336 LLGRGSFGSVYEGISD-------------------------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE  390 (504)
Q Consensus       336 ~LG~G~FG~VYka~~~-------------------------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp  390 (504)
                      .||+|+||.||+|...                         ....+++|.+...     .......+.+|+.+++.++||
T Consensus         2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~-----~~~~~~~~~~~~~~~~~l~h~   76 (274)
T cd05076           2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPS-----HRDIALAFFETASLMSQVSHI   76 (274)
T ss_pred             CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChH-----HHHHHHHHHHHHHHHhcCCCC
Confidence            5999999999998741                         1134777766421     122335677889999999999


Q ss_pred             ceeEEeeeecCCCeEEEEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC--
Q 010676          391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG--  466 (504)
Q Consensus       391 nIV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g--  466 (504)
                      ||+++++++......|+||||+++++|..++..  ..+++..+..++.||+.||.|||++||+||||||+|||++..+  
T Consensus        77 niv~~~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiH~dlkp~Nill~~~~~~  156 (274)
T cd05076          77 HLAFVHGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLEDKNLVHGNVCAKNILLARLGLA  156 (274)
T ss_pred             CeeeEEEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHcCCccCCCCCcccEEEeccCcc
Confidence            999999999999999999999999999988864  4588999999999999999999999999999999999997654  


Q ss_pred             -----cEEEEecCcccccccCCcccccCCCcccccccccC
Q 010676          467 -----SVKLADFGLAKATKLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       467 -----~VKL~DFGLA~~~~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                           .+||+|||++......  ....++..|+|||++.+
T Consensus       157 ~~~~~~~kl~d~g~~~~~~~~--~~~~~~~~~~aPe~~~~  194 (274)
T cd05076         157 EGTSPFIKLSDPGVSFTALSR--EERVERIPWIAPECVPG  194 (274)
T ss_pred             cCccceeeecCCccccccccc--cccccCCcccCchhhcC
Confidence                 3899999987543222  22357888999998865


No 322
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=99.92  E-value=7.2e-25  Score=223.21  Aligned_cols=172  Identities=29%  Similarity=0.466  Sum_probs=143.2

Q ss_pred             ccccceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCC-
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDE-  402 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~-  402 (504)
                      .+.++|++.+.||+|+||.||+|.+. ++..+++|.+......   ......+.+|+.+++++ +|+||+++++++... 
T Consensus         4 ~~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~   80 (337)
T cd07852           4 HILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRN---ATDAQRTFREIMFLQELGDHPNIVKLLNVIKAEN   80 (337)
T ss_pred             hhhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCc---chhhhhhhHHHHHHHHhcCCCCccceeeeeccCC
Confidence            45678999999999999999999984 7889999987532111   12234567899999999 999999999987654 


Q ss_pred             -CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          403 -SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       403 -~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                       ..+|+||||+.+ +|..++....+.+..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||++.....
T Consensus        81 ~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~~qi~~~L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~  159 (337)
T cd07852          81 DKDIYLVFEYMET-DLHAVIRANILEDVHKRYIMYQLLKALKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSE  159 (337)
T ss_pred             CceEEEEeccccc-CHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhcccc
Confidence             468999999985 899988877888899999999999999999999999999999999999999999999999875433


Q ss_pred             CC-------cccccCCCcccccccccC
Q 010676          482 ND-------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       482 ~~-------~~s~~GT~~YmAPEVL~g  501 (504)
                      ..       .....||..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~y~aPE~~~~  186 (337)
T cd07852         160 LEENPENPVLTDYVATRWYRAPEILLG  186 (337)
T ss_pred             ccccccCcchhcccccccccCceeeec
Confidence            22       223458999999998754


No 323
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity 
Probab=99.92  E-value=3.8e-25  Score=216.13  Aligned_cols=160  Identities=21%  Similarity=0.332  Sum_probs=132.4

Q ss_pred             eeecccCceeEEEEEcc-C-------CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          335 DLLGRGSFGSVYEGISD-D-------GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~-~-------g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      +.||+|+||.||+|... .       ...+++|.+..     ........+.+|+.+++.++||||+++++++......+
T Consensus         1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~-----~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~   75 (258)
T cd05078           1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDK-----SHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESI   75 (258)
T ss_pred             CCCCcccchhheeeeecccccccccccchhhHHhhcc-----hhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcE
Confidence            36999999999999863 2       23467776532     12333456788999999999999999999999989999


Q ss_pred             EEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCc--------EEEEecCcc
Q 010676          407 IFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS--------VKLADFGLA  476 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~--------VKL~DFGLA  476 (504)
                      +||||+.+|+|..++...  .+++..++.++.||+.||.|||++||+||||||+|||++.++.        ++|+|||++
T Consensus        76 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~  155 (258)
T cd05078          76 MVQEYVKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGIS  155 (258)
T ss_pred             EEEecCCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccc
Confidence            999999999999998754  3788899999999999999999999999999999999987764        699999987


Q ss_pred             cccccCCcccccCCCcccccccccC
Q 010676          477 KATKLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       477 ~~~~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      ......  ....++..|||||++.+
T Consensus       156 ~~~~~~--~~~~~~~~y~aPE~~~~  178 (258)
T cd05078         156 ITVLPK--EILLERIPWVPPECIEN  178 (258)
T ss_pred             cccCCc--hhccccCCccCchhccC
Confidence            654322  33468899999999875


No 324
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=8.1e-26  Score=232.67  Aligned_cols=173  Identities=26%  Similarity=0.392  Sum_probs=145.8

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCe
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESK  404 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~  404 (504)
                      ...+|..+.+||+|+||.|.+|.. .+...||||+++....-  ....++--+.|-++|... +-|++++++.+|++-+.
T Consensus       347 ~~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDVii--QdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDR  424 (683)
T KOG0696|consen  347 KATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVII--QDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDR  424 (683)
T ss_pred             eecccceEEEeccCccceeeeecccCcchhhhhhhhccceee--ecCcccceehhhhheecCCCCchHHHHHHHhhhhhh
Confidence            356899999999999999999987 57789999988642211  111223345677777765 47899999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc--cc
Q 010676          405 LYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT--KL  481 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~--~~  481 (504)
                      +|+||||+.||+|-..+++. ++.+..+..|+.+|+-||-|||++|||+||||.+|||++.+|++||+|||+++..  ..
T Consensus       425 LyFVMEyvnGGDLMyhiQQ~GkFKEp~AvFYAaEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~  504 (683)
T KOG0696|consen  425 LYFVMEYVNGGDLMYHIQQVGKFKEPVAVFYAAEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDG  504 (683)
T ss_pred             eeeEEEEecCchhhhHHHHhcccCCchhhhhhHHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCC
Confidence            99999999999998888774 5999999999999999999999999999999999999999999999999999863  33


Q ss_pred             CCcccccCCCcccccccccC
Q 010676          482 NDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       482 ~~~~s~~GT~~YmAPEVL~g  501 (504)
                      ....+.||||.|+|||++.-
T Consensus       505 ~TTkTFCGTPdYiAPEIi~Y  524 (683)
T KOG0696|consen  505 VTTKTFCGTPDYIAPEIIAY  524 (683)
T ss_pred             cceeeecCCCcccccceEEe
Confidence            34667899999999999863


No 325
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=99.92  E-value=1.2e-24  Score=218.40  Aligned_cols=169  Identities=26%  Similarity=0.463  Sum_probs=137.6

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCc----eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGF----FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~----~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      ++|++.+.||+|+||.||+|.+ .++.    .+|+|.+....    .......+.+|+.+++.++||||+++++++... 
T Consensus         7 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~----~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-   81 (303)
T cd05110           7 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETT----GPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-   81 (303)
T ss_pred             hhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccC----CHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-
Confidence            4788999999999999999987 3444    46777664321    122234678899999999999999999988754 


Q ss_pred             eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      ..++++||+++|+|.+++...  .+++..+..++.||+.||.|||++||+|+||||+|||++.++.+||+|||+++....
T Consensus        82 ~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~  161 (303)
T cd05110          82 TIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEG  161 (303)
T ss_pred             CceeeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHhhcCeeccccccceeeecCCCceEEccccccccccC
Confidence            578999999999999988654  478889999999999999999999999999999999999999999999999976543


Q ss_pred             CC----cccccCCCcccccccccCC
Q 010676          482 ND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..    .....++..|||||++.+.
T Consensus       162 ~~~~~~~~~~~~~~~y~~PE~~~~~  186 (303)
T cd05110         162 DEKEYNADGGKMPIKWMALECIHYR  186 (303)
T ss_pred             cccccccCCCccccccCCHHHhccC
Confidence            22    1123357789999998754


No 326
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=99.92  E-value=1.5e-24  Score=215.79  Aligned_cols=172  Identities=30%  Similarity=0.557  Sum_probs=141.9

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC-
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES-  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-  403 (504)
                      ...++|++.+.||+|+||.||+|.+ .++..|++|.+.......   .....+.+|+.+++.++||||+++++++.+.. 
T Consensus         4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~---~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~   80 (302)
T cd07864           4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKE---GFPITAIREIKILRQLNHRNIVNLKEIVTDKQD   80 (302)
T ss_pred             hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeeccccc---CchHHHHHHHHHHHhCCCCCeeeeeheecCcch
Confidence            4567899999999999999999998 468899999886533211   12245678999999999999999999887655 


Q ss_pred             ---------eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          404 ---------KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       404 ---------~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                               .+|+||||+++ +|..++...  .+++..+..++.||+.||.|||+.||+|+||||+||+++.++.+||+|
T Consensus        81 ~~~~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~i~H~dl~p~nili~~~~~~kl~d  159 (302)
T cd07864          81 ALDFKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCHKKNFLHRDIKCSNILLNNKGQIKLAD  159 (302)
T ss_pred             hhhccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCcEEeCc
Confidence                     79999999987 666666543  589999999999999999999999999999999999999999999999


Q ss_pred             cCcccccccCCc---ccccCCCcccccccccC
Q 010676          473 FGLAKATKLNDV---KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       473 FGLA~~~~~~~~---~s~~GT~~YmAPEVL~g  501 (504)
                      ||++........   ....++..|+|||++.+
T Consensus       160 fg~~~~~~~~~~~~~~~~~~~~~y~~PE~~~~  191 (302)
T cd07864         160 FGLARLYNSEESRPYTNKVITLWYRPPELLLG  191 (302)
T ss_pred             ccccccccCCcccccccceeccCccChHHhcC
Confidence            999876543321   22346788999998864


No 327
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=99.92  E-value=2.8e-24  Score=215.88  Aligned_cols=167  Identities=32%  Similarity=0.544  Sum_probs=141.6

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.|++.+.||+|+||.||+|.. .++..|++|++......  .......+.+|+.+++.++||||+++++++...+..|+
T Consensus        15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~--~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~l   92 (307)
T cd06607          15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWL   92 (307)
T ss_pred             hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccC--cHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEE
Confidence            4688899999999999999998 57899999988643222  22334568899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHH--hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          408 FLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~--~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      ||||+.+ +|.+++.  ...+++..+..++.||+.||.|||+.||+|+||+|.||+++.++.++|+|||++......  .
T Consensus        93 v~e~~~g-~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~--~  169 (307)
T cd06607          93 VMEYCLG-SASDILEVHKKPLQEVEIAAICHGALQGLAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPA--N  169 (307)
T ss_pred             EHHhhCC-CHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCC--C
Confidence            9999985 6666654  345899999999999999999999999999999999999999999999999998754322  2


Q ss_pred             cccCCCccccccccc
Q 010676          486 SCRGTAFWMAPEVCS  500 (504)
Q Consensus       486 s~~GT~~YmAPEVL~  500 (504)
                      ...+++.|+|||++.
T Consensus       170 ~~~~~~~y~aPE~~~  184 (307)
T cd06607         170 SFVGTPYWMAPEVIL  184 (307)
T ss_pred             CccCCccccCceeee
Confidence            346889999999874


No 328
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=99.92  E-value=1.8e-24  Score=209.24  Aligned_cols=170  Identities=32%  Similarity=0.621  Sum_probs=143.6

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|.+.+.||+|+||.||++.+ .+|..+++|.+.......   .....+.+|+.+++.++|+||+++++.+.....+|+|
T Consensus         1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv   77 (257)
T cd08225           1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPV---KEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIV   77 (257)
T ss_pred             CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccc---hhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEE
Confidence            488999999999999999998 568899999886532211   1234677899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-cEEEEecCcccccccCC-
Q 010676          409 LELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-SVKLADFGLAKATKLND-  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-~VKL~DFGLA~~~~~~~-  483 (504)
                      +||+.+++|.+++...   .+++..+..++.|++.||.|||+++|+|+||||.||+++.++ .++|+|||++....... 
T Consensus        78 ~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~  157 (257)
T cd08225          78 MEYCDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSME  157 (257)
T ss_pred             EecCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcc
Confidence            9999999999988653   378899999999999999999999999999999999999886 46999999987654332 


Q ss_pred             -cccccCCCcccccccccCC
Q 010676          484 -VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g~  502 (504)
                       .....|++.|+|||++.+.
T Consensus       158 ~~~~~~~~~~~~ape~~~~~  177 (257)
T cd08225         158 LAYTCVGTPYYLSPEICQNR  177 (257)
T ss_pred             cccccCCCccccCHHHHcCC
Confidence             2234589999999988653


No 329
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=99.92  E-value=1.9e-24  Score=213.00  Aligned_cols=167  Identities=33%  Similarity=0.518  Sum_probs=141.0

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |++.+.||.|++|.||+|.+ .+|..|++|++.......   .....+.+|+.+++.++|+||+++++++.+.+..|++|
T Consensus         1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~---~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~   77 (283)
T cd07835           1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDE---GVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVF   77 (283)
T ss_pred             CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccc---cchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEE
Confidence            67788999999999999997 589999999886432211   12245678999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--c
Q 010676          410 ELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--V  484 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~  484 (504)
                      ||+. ++|.+++...   .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++.......  .
T Consensus        78 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~  156 (283)
T cd07835          78 EFLD-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTY  156 (283)
T ss_pred             eccC-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcccc
Confidence            9996 5898888664   48999999999999999999999999999999999999999999999999987543222  2


Q ss_pred             ccccCCCcccccccccC
Q 010676          485 KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g  501 (504)
                      ....++..|+|||++.+
T Consensus       157 ~~~~~~~~~~aPE~~~~  173 (283)
T cd07835         157 THEVVTLWYRAPEILLG  173 (283)
T ss_pred             CccccccCCCCCceeec
Confidence            23357889999998764


No 330
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=99.92  E-value=2.1e-24  Score=221.49  Aligned_cols=172  Identities=30%  Similarity=0.476  Sum_probs=143.9

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC-
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE-  402 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~-  402 (504)
                      ..+.++|++.+.||+|+||.||+|.+ .++..||+|++.....   .......+.+|+.++..++|+||+++++++... 
T Consensus        13 ~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~   89 (345)
T cd07877          13 WEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQ---SIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR   89 (345)
T ss_pred             hhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcch---hhHHHHHHHHHHHHHHHcCCCcccceeeeeeecc
Confidence            34567899999999999999999987 6789999998754221   122235677899999999999999999887532 


Q ss_pred             -----CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          403 -----SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       403 -----~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                           ..+|++++++ +++|.+++....+++..+..++.||+.||.|||++||+||||||+||+++.++.+||+|||++.
T Consensus        90 ~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~  168 (345)
T cd07877          90 SLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLAR  168 (345)
T ss_pred             cccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChHHEEEcCCCCEEEecccccc
Confidence                 4478888887 6789998888789999999999999999999999999999999999999999999999999987


Q ss_pred             ccccCCcccccCCCcccccccccC
Q 010676          478 ATKLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       478 ~~~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      .... ......+|..|+|||++.+
T Consensus       169 ~~~~-~~~~~~~~~~y~aPE~~~~  191 (345)
T cd07877         169 HTDD-EMTGYVATRWYRAPEIMLN  191 (345)
T ss_pred             cccc-cccccccCCCccCHHHHhC
Confidence            6432 2334568999999998755


No 331
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=99.92  E-value=2.8e-24  Score=213.90  Aligned_cols=167  Identities=33%  Similarity=0.534  Sum_probs=143.7

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |...+.||+|+||.||++.+ .++..+++|.+.....     .....+.+|+.+++.++|+||+++++++...+..|+++
T Consensus        21 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~-----~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~   95 (285)
T cd06648          21 LDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQ-----QRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVM   95 (285)
T ss_pred             hhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccch-----hHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEE
Confidence            44457899999999999987 5788999998754221     22345789999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--cccc
Q 010676          410 ELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VKSC  487 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~s~  487 (504)
                      ||+.+++|.+++....+++..+..++.|++.||.|||++||+||||+|+||+++.++.++|+|||++.......  ....
T Consensus        96 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~  175 (285)
T cd06648          96 EFLEGGALTDIVTHTRMNEEQIATVCLAVLKALSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSL  175 (285)
T ss_pred             eccCCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccc
Confidence            99999999999988889999999999999999999999999999999999999999999999999876543221  2334


Q ss_pred             cCCCcccccccccCC
Q 010676          488 RGTAFWMAPEVCSNP  502 (504)
Q Consensus       488 ~GT~~YmAPEVL~g~  502 (504)
                      .|++.|+|||++.++
T Consensus       176 ~~~~~y~aPE~~~~~  190 (285)
T cd06648         176 VGTPYWMAPEVISRL  190 (285)
T ss_pred             cCCccccCHHHhcCC
Confidence            589999999998764


No 332
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=99.92  E-value=2.9e-24  Score=211.30  Aligned_cols=164  Identities=29%  Similarity=0.520  Sum_probs=132.3

Q ss_pred             eeecccCceeEEEEEcc-CCc--eEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEEEEE
Q 010676          335 DLLGRGSFGSVYEGISD-DGF--FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~-~g~--~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      +.||+|+||.||+|.+. ++.  .+++|.+....    .......+.+|+.++.++ +||||+++++++...+.+|+|||
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~----~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e   76 (270)
T cd05047           1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYA----SKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIE   76 (270)
T ss_pred             CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccC----CHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEE
Confidence            36899999999999974 443  45777664211    122345678899999999 79999999999999999999999


Q ss_pred             eccCCCHHHHHHhc-----------------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEec
Q 010676          411 LVTKGSLLNLYQRY-----------------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       411 y~~ggsL~~ll~~~-----------------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                      |+++++|.+++...                 .+++.++..++.|++.||+|||++|++|+||||+|||++.++.+||+||
T Consensus        77 ~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~df  156 (270)
T cd05047          77 YAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADF  156 (270)
T ss_pred             eCCCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCC
Confidence            99999999988653                 2678899999999999999999999999999999999999999999999


Q ss_pred             CcccccccCCc-ccccCCCcccccccccCC
Q 010676          474 GLAKATKLNDV-KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~~~-~s~~GT~~YmAPEVL~g~  502 (504)
                      |++........ .....+..|+|||++.+.
T Consensus       157 gl~~~~~~~~~~~~~~~~~~y~apE~~~~~  186 (270)
T cd05047         157 GLSRGQEVYVKKTMGRLPVRWMAIESLNYS  186 (270)
T ss_pred             CCccccchhhhccCCCCccccCChHHHccC
Confidence            99863221111 112245679999988654


No 333
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.92  E-value=1.5e-24  Score=239.30  Aligned_cols=169  Identities=31%  Similarity=0.598  Sum_probs=144.9

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeec---
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDK---  400 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~---  400 (504)
                      -..+-|.+.+.||.|.+|.||+++. .+++..|+|+........      .+++.|.++|+.+. |||++.+|++|.   
T Consensus        16 dp~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~d------eEiE~eynil~~~~~hpnv~~fyg~~~k~~   89 (953)
T KOG0587|consen   16 DPADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDEE------EEIELEYNMLKKYSHHPNVATFYGAFIKKD   89 (953)
T ss_pred             CCCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCcccc------HHHHHHHHHHHhccCCCCcceEEEEEEEec
Confidence            3345789999999999999999998 688999999876533322      45678889998875 999999999874   


Q ss_pred             --CCCeEEEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCc
Q 010676          401 --DESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGL  475 (504)
Q Consensus       401 --~~~~lyLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGL  475 (504)
                        .++++|||||||.+|+..+++++   ..+.+..+.+|++.++.||.|||.+.+||||||-.|||++.+|.|||+|||.
T Consensus        90 ~~~~DqLWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGv  169 (953)
T KOG0587|consen   90 PGNGDQLWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGV  169 (953)
T ss_pred             CCCCCeEEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeee
Confidence              46789999999999999998875   3589999999999999999999999999999999999999999999999999


Q ss_pred             cccccc--CCcccccCCCccccccccc
Q 010676          476 AKATKL--NDVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       476 A~~~~~--~~~~s~~GT~~YmAPEVL~  500 (504)
                      +.....  ....++.|||+||||||+.
T Consensus       170 SaQldsT~grRnT~iGtP~WMAPEVia  196 (953)
T KOG0587|consen  170 SAQLDSTVGRRNTFIGTPYWMAPEVIA  196 (953)
T ss_pred             eeeeecccccccCcCCCcccccceeee
Confidence            765443  2345677999999999985


No 334
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=99.92  E-value=2.2e-24  Score=210.97  Aligned_cols=173  Identities=29%  Similarity=0.559  Sum_probs=144.0

Q ss_pred             ceeeeeeecccCceeEEEEEcc--CCceEEEEEEeccccc-----hhhHHHHHHHHHHHHHHhh-CCCCceeEEeeeecC
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD--DGFFFAVKEVSLLDQG-----SQAKQSISQLEQEIALLSR-FEHENIVQYYGTDKD  401 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~--~g~~vAVK~v~~~~~~-----~~~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~~~~~  401 (504)
                      .|++.+.||+|+||.||+|.+.  .+..+|+|.+......     .........+.+|+.++.+ ++|+||+++++++..
T Consensus         1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~   80 (269)
T cd08528           1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE   80 (269)
T ss_pred             CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence            4788899999999999999984  4789999987543221     1223445667788888865 789999999999999


Q ss_pred             CCeEEEEEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCc
Q 010676          402 ESKLYIFLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGL  475 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGL  475 (504)
                      ++.+|++|||+.+++|.+++..     ..+++..++.++.|++.+|.|||+ .+|+|+||+|.|||++.++.++|+|||+
T Consensus        81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~  160 (269)
T cd08528          81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGL  160 (269)
T ss_pred             CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccc
Confidence            9999999999999999887742     348889999999999999999996 7899999999999999999999999999


Q ss_pred             ccccccC-CcccccCCCcccccccccCC
Q 010676          476 AKATKLN-DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       476 A~~~~~~-~~~s~~GT~~YmAPEVL~g~  502 (504)
                      +...... ......|+..|+|||++.++
T Consensus       161 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~  188 (269)
T cd08528         161 AKQKQPESKLTSVVGTILYSCPEIVKNE  188 (269)
T ss_pred             eeecccccccccccCcccCcChhhhcCC
Confidence            8765443 23445689999999998764


No 335
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=99.92  E-value=3.1e-24  Score=209.00  Aligned_cols=164  Identities=30%  Similarity=0.509  Sum_probs=135.0

Q ss_pred             eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHH-HhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIAL-LSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~i-L~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      +.||.|+||.||+|.+ .++..||+|.+......  .......+..|..+ ...++|+||+++++++...+.+|+||||+
T Consensus         2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~--~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~   79 (260)
T cd05611           2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMI--AKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYL   79 (260)
T ss_pred             ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhh--HHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEecc
Confidence            5699999999999998 57889999987543221  11222334445444 44568999999999999999999999999


Q ss_pred             cCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcccccCCC
Q 010676          413 TKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTA  491 (504)
Q Consensus       413 ~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~GT~  491 (504)
                      .+++|.+++... .+++..+..++.||+.||.|||+.||+|+||+|.|||++.++.++|+|||++.....  .....++.
T Consensus        80 ~~~~L~~~l~~~~~~~~~~~~~i~~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~--~~~~~~~~  157 (260)
T cd05611          80 NGGDCASLIKTLGGLPEDWAKQYIAEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE--NKKFVGTP  157 (260)
T ss_pred             CCCCHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccc--cccCCCCc
Confidence            999999998764 589999999999999999999999999999999999999999999999999875433  22345889


Q ss_pred             cccccccccCC
Q 010676          492 FWMAPEVCSNP  502 (504)
Q Consensus       492 ~YmAPEVL~g~  502 (504)
                      .|+|||++.++
T Consensus       158 ~y~~pe~~~~~  168 (260)
T cd05611         158 DYLAPETILGV  168 (260)
T ss_pred             CccChhhhcCC
Confidence            99999998765


No 336
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=99.92  E-value=3.2e-24  Score=212.43  Aligned_cols=170  Identities=35%  Similarity=0.610  Sum_probs=147.6

Q ss_pred             cccceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ..+.|++.+.||+|+||.||+|.+. ++..|++|.+.....      ....+.+|+.+++.++|+||+++++.+...+.+
T Consensus        17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~------~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~   90 (286)
T cd06614          17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ------NKELIINEILIMKDCKHPNIVDYYDSYLVGDEL   90 (286)
T ss_pred             ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch------hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEE
Confidence            3456888899999999999999985 788999998864332      345678999999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          406 YIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      |++|||+++++|.+++...  .+++..+..++.|++.||.|||+.||+|+||+|+||+++.++.++|+|||++.......
T Consensus        91 ~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~  170 (286)
T cd06614          91 WVVMEYMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEK  170 (286)
T ss_pred             EEEEeccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccch
Confidence            9999999999999999876  69999999999999999999999999999999999999999999999999876543221


Q ss_pred             --cccccCCCcccccccccCC
Q 010676          484 --VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g~  502 (504)
                        .....++..|++||++.++
T Consensus       171 ~~~~~~~~~~~y~~PE~~~~~  191 (286)
T cd06614         171 SKRNSVVGTPYWMAPEVIKRK  191 (286)
T ss_pred             hhhccccCCcccCCHhHhcCC
Confidence              2334588999999988754


No 337
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=2.7e-26  Score=240.90  Aligned_cols=173  Identities=26%  Similarity=0.387  Sum_probs=151.0

Q ss_pred             ccceeeeeeecccCceeEEEEEccC-CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~~~-g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      +.+++++..||-|+||.|-++.... ...+|+|++++.....  ....+++..|-++|..++.|+||++|-.|.+..++|
T Consensus       419 l~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVd--tkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvY  496 (732)
T KOG0614|consen  419 LSDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVD--TKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVY  496 (732)
T ss_pred             hhhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccc--hhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhh
Confidence            4566777889999999999988743 3358999886544333  334577889999999999999999999999999999


Q ss_pred             EEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-c
Q 010676          407 IFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-V  484 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~  484 (504)
                      |+||-|-||.|+.+++.. .|.+.+++.|+..++.|++|||.+|||+|||||+|+|++.+|.+||.|||+|+.+..+. .
T Consensus       497 mLmEaClGGElWTiLrdRg~Fdd~tarF~~acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KT  576 (732)
T KOG0614|consen  497 MLMEACLGGELWTILRDRGSFDDYTARFYVACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKT  576 (732)
T ss_pred             hhHHhhcCchhhhhhhhcCCcccchhhhhHHHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCce
Confidence            999999999999988754 59999999999999999999999999999999999999999999999999999877654 4


Q ss_pred             ccccCCCcccccccccCC
Q 010676          485 KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g~  502 (504)
                      -++||||.|.|||++.++
T Consensus       577 wTFcGTpEYVAPEIILnK  594 (732)
T KOG0614|consen  577 WTFCGTPEYVAPEIILNK  594 (732)
T ss_pred             eeecCCcccccchhhhcc
Confidence            568899999999998875


No 338
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=99.92  E-value=4.2e-24  Score=218.07  Aligned_cols=171  Identities=29%  Similarity=0.422  Sum_probs=144.3

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-CC
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-ES  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-~~  403 (504)
                      .+.++|++.+.||.|+||.||+|.+ .++..||+|++......   ......+.+|+.+++.++||||++++++|.. ..
T Consensus         7 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~   83 (328)
T cd07856           7 EITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFST---PVLAKRTYRELKLLKHLRHENIISLSDIFISPLE   83 (328)
T ss_pred             ccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccc---cchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCC
Confidence            4567899999999999999999987 58999999987532211   1223557789999999999999999998865 56


Q ss_pred             eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          404 KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      .+|++|||+. ++|..++....+.+..+..++.||+.||.|||++||+|+||+|.|||++.++.++|+|||++...... 
T Consensus        84 ~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~~ql~~aL~~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~-  161 (328)
T cd07856          84 DIYFVTELLG-TDLHRLLTSRPLEKQFIQYFLYQILRGLKYVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQ-  161 (328)
T ss_pred             cEEEEeehhc-cCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCC-
Confidence            7899999984 58999988888898999999999999999999999999999999999999999999999998754332 


Q ss_pred             cccccCCCcccccccccC
Q 010676          484 VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~g  501 (504)
                      .....++..|+|||++.+
T Consensus       162 ~~~~~~~~~y~aPE~~~~  179 (328)
T cd07856         162 MTGYVSTRYYRAPEIMLT  179 (328)
T ss_pred             cCCCcccccccCceeeec
Confidence            234467889999998754


No 339
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.92  E-value=2.1e-25  Score=224.97  Aligned_cols=173  Identities=27%  Similarity=0.441  Sum_probs=149.7

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeE
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKL  405 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~l  405 (504)
                      +++|.++++||+|+|..|.++.. .+.+.||+|++++.-.  +..+.+..++.|-.+..+. +||++|.++.+|+++..+
T Consensus       249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~--nddedidwvqtek~vfe~asn~pflvglhscfqtesrl  326 (593)
T KOG0695|consen  249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELV--NDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRL  326 (593)
T ss_pred             cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhc--CCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceE
Confidence            56899999999999999999988 6889999998864322  2234456667777777765 599999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc-cccCC
Q 010676          406 YIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA-TKLND  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~-~~~~~  483 (504)
                      ++|.||++||+|--.+++ .+++++.+..|..+|+.||.|||++|||+||||.+|+||+..|++||+|+|+++. +..++
T Consensus       327 ffvieyv~ggdlmfhmqrqrklpeeharfys~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd  406 (593)
T KOG0695|consen  327 FFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGD  406 (593)
T ss_pred             EEEEEEecCcceeeehhhhhcCcHHHhhhhhHHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCc
Confidence            999999999999776654 5699999999999999999999999999999999999999999999999999986 33333


Q ss_pred             -cccccCCCcccccccccCC
Q 010676          484 -VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g~  502 (504)
                       ..++||||.|.|||+|.|.
T Consensus       407 ~tstfcgtpnyiapeilrge  426 (593)
T KOG0695|consen  407 TTSTFCGTPNYIAPEILRGE  426 (593)
T ss_pred             ccccccCCCcccchhhhccc
Confidence             5678999999999999874


No 340
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=99.92  E-value=2.2e-24  Score=219.24  Aligned_cols=172  Identities=28%  Similarity=0.464  Sum_probs=139.7

Q ss_pred             ce-eeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHH---------HHHHHHHHHHHHhhCCCCceeEEeee
Q 010676          330 YW-QKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQ---------SISQLEQEIALLSRFEHENIVQYYGT  398 (504)
Q Consensus       330 ~y-~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~---------~~~~~~~Ei~iL~~L~HpnIV~l~~~  398 (504)
                      +| .+.+.||.|+||+||+|.+ .++..||+|.+...........         ....+.+|+.+++.++|+||++++++
T Consensus         9 ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~   88 (335)
T PTZ00024          9 RYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVDV   88 (335)
T ss_pred             chhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeEE
Confidence            44 4567899999999999997 5789999998864332211000         01246789999999999999999999


Q ss_pred             ecCCCeEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          399 DKDESKLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       399 ~~~~~~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      +...+.+|+||||+.+ +|.+++.. ..+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.
T Consensus        89 ~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~ql~~aL~~LH~~~i~H~dl~~~nill~~~~~~kl~dfg~~~  167 (335)
T PTZ00024         89 YVEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCILLQILNGLNVLHKWYFMHRDLSPANIFINSKGICKIADFGLAR  167 (335)
T ss_pred             EecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHeEECCCCCEEECCcccee
Confidence            9999999999999974 78887765 458999999999999999999999999999999999999999999999999987


Q ss_pred             cccc----------------CCcccccCCCcccccccccCC
Q 010676          478 ATKL----------------NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       478 ~~~~----------------~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      ....                .......++..|+|||++.+.
T Consensus       168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  208 (335)
T PTZ00024        168 RYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGA  208 (335)
T ss_pred             ecccccccccccccccccccccccccccccCCCCChhcccC
Confidence            5441                111223468899999998653


No 341
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=99.92  E-value=3.6e-24  Score=212.21  Aligned_cols=172  Identities=30%  Similarity=0.445  Sum_probs=143.8

Q ss_pred             ceeeeeeecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCe
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESK  404 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~  404 (504)
                      .|++.+.||+|+||.||++..    .++..||+|.+..... .........+.+|+.++.++ +|+||+++++.+..+..
T Consensus         1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~-~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~   79 (288)
T cd05583           1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATI-VQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTK   79 (288)
T ss_pred             CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHH-HhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCE
Confidence            478899999999999999985    3678899998864322 11223345678899999999 59999999999999999


Q ss_pred             EEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          405 LYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      +|+||||+.+++|..++.. ..+++..+..++.|++.+|.|||+.+++|+||||.||+++.++.++|+|||++.......
T Consensus        80 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~  159 (288)
T cd05583          80 LHLILDYVNGGELFTHLYQREHFTESEVRVYIAEIVLALDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEE  159 (288)
T ss_pred             EEEEEecCCCCcHHHHHhhcCCcCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEEECcccccccccc
Confidence            9999999999999988765 458899999999999999999999999999999999999999999999999987643322


Q ss_pred             ---cccccCCCcccccccccCC
Q 010676          484 ---VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ---~~s~~GT~~YmAPEVL~g~  502 (504)
                         .....|+..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~y~aPE~~~~~  181 (288)
T cd05583         160 EERAYSFCGTIEYMAPEVIRGG  181 (288)
T ss_pred             ccccccccCCccccCHHHhcCC
Confidence               1234589999999988653


No 342
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=99.92  E-value=1.7e-24  Score=219.03  Aligned_cols=169  Identities=31%  Similarity=0.511  Sum_probs=143.7

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC-----
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES-----  403 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----  403 (504)
                      +|++.+.||.|+||.||+|.+ .++..|++|.+.....   .....+.+.+|+.+++.++|+||+++++++....     
T Consensus         1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~   77 (330)
T cd07834           1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFD---DLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFN   77 (330)
T ss_pred             CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccc---cchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCccccc
Confidence            588999999999999999998 4689999998864321   1223456888999999999999999999987775     


Q ss_pred             eEEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .+|++|+|+.+ +|.+++... .+++..+..++.||+.||.|||++||+|+||||.|||++.++.++|+|||++......
T Consensus        78 ~~~lv~e~~~~-~l~~~l~~~~~l~~~~~~~i~~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~  156 (330)
T cd07834          78 DVYIVTELMET-DLHKVIKSPQPLTDDHIQYFLYQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPD  156 (330)
T ss_pred             ceEEEecchhh-hHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeeccc
Confidence            79999999985 788877654 6899999999999999999999999999999999999999999999999998865443


Q ss_pred             C-----cccccCCCcccccccccCC
Q 010676          483 D-----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~-----~~s~~GT~~YmAPEVL~g~  502 (504)
                      .     .....+|..|+|||++.+.
T Consensus       157 ~~~~~~~~~~~~~~~y~aPE~~~~~  181 (330)
T cd07834         157 EDEKGFLTEYVVTRWYRAPELLLSS  181 (330)
T ss_pred             ccccccccccccccCcCCceeeecc
Confidence            2     3345689999999998765


No 343
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=99.92  E-value=3.5e-24  Score=227.93  Aligned_cols=171  Identities=27%  Similarity=0.390  Sum_probs=145.8

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +...+.+.||+|-||.|.++....+..||+|.++....    +.....|.+||++|.+|+|||||.+++.|..++.+++|
T Consensus       538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~----~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI  613 (807)
T KOG1094|consen  538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDAT----KNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMI  613 (807)
T ss_pred             hheehhhhhcCcccceeEEEEecCceEEEEeecCcccc----hhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHH
Confidence            35678899999999999999998889999998864332    33357799999999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          409 LELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      |||+++|+|.+++....   +.......|+.||+.|++||.+.++|||||.+.|+|++.++++||+|||+++-+-.++..
T Consensus       614 ~EYmEnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy  693 (807)
T KOG1094|consen  614 TEYMENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY  693 (807)
T ss_pred             HHHHhcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence            99999999999997663   234556679999999999999999999999999999999999999999999865555443


Q ss_pred             ccc----CCCcccccc-cccCCC
Q 010676          486 SCR----GTAFWMAPE-VCSNPF  503 (504)
Q Consensus       486 s~~----GT~~YmAPE-VL~g~~  503 (504)
                      ...    -...|||+| ++.|+|
T Consensus       694 ~vqgr~vlpiRwmawEsillgkF  716 (807)
T KOG1094|consen  694 RVQGRAVLPIRWMAWESILLGKF  716 (807)
T ss_pred             eeecceeeeeeehhHHHHHhccc
Confidence            333    457899999 555665


No 344
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=99.91  E-value=4.7e-24  Score=207.55  Aligned_cols=164  Identities=26%  Similarity=0.446  Sum_probs=132.2

Q ss_pred             eeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeec-CCCeEEEEE
Q 010676          335 DLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDK-DESKLYIFL  409 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~-~~~~lyLVm  409 (504)
                      +.||+|+||.||+|.+.    ++..+|+|.+....    .......+.+|+.+++.++||||+++++++. .++..|++|
T Consensus         1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~   76 (262)
T cd05058           1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRIT----DLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVL   76 (262)
T ss_pred             CcccccCCceEEEEEEecCCCceEEEEEEecCccC----CHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEE
Confidence            46899999999999863    34578999764321    1233467788999999999999999999765 456689999


Q ss_pred             EeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC----
Q 010676          410 ELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----  483 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----  483 (504)
                      ||+.+++|.+++...  .+....+..++.||+.||.|||+++|+||||||+|||++.++.+||+|||+++......    
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~  156 (262)
T cd05058          77 PYMKHGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV  156 (262)
T ss_pred             ecCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence            999999999998754  35667788899999999999999999999999999999999999999999987543221    


Q ss_pred             --cccccCCCcccccccccCC
Q 010676          484 --VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g~  502 (504)
                        .....++..|+|||++.+.
T Consensus       157 ~~~~~~~~~~~y~aPE~~~~~  177 (262)
T cd05058         157 HNHTGAKLPVKWMALESLQTQ  177 (262)
T ss_pred             cccccCcCCccccChhHhccC
Confidence              1233467789999987643


No 345
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=99.91  E-value=3.5e-25  Score=229.46  Aligned_cols=176  Identities=24%  Similarity=0.373  Sum_probs=147.1

Q ss_pred             cccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhh--HHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQA--KQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~--~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      +.+.++|.++.+||+|||+.||+|.+ ...++||||+-.+.+.....  ....++..+|..|-+.|+||.||++|++|.-
T Consensus       459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl  538 (775)
T KOG1151|consen  459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL  538 (775)
T ss_pred             cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence            34567899999999999999999998 67889999987654433222  2335667899999999999999999999864


Q ss_pred             -CCeEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHC--CceecCCCCCcEEEcC---CCcEEEEecC
Q 010676          402 -ESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQ--DVVHRDIKCANILVDA---NGSVKLADFG  474 (504)
Q Consensus       402 -~~~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~--gIIHRDLKP~NILLd~---~g~VKL~DFG  474 (504)
                       .+.+|-|+|||+|.+|..|++..+ +++.++..|+.||+.||.||.+.  .|||-||||.|||+-.   -|.+||+|||
T Consensus       539 DtdsFCTVLEYceGNDLDFYLKQhklmSEKEARSIiMQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFG  618 (775)
T KOG1151|consen  539 DTDSFCTVLEYCEGNDLDFYLKQHKLMSEKEARSIIMQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFG  618 (775)
T ss_pred             ccccceeeeeecCCCchhHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecc
Confidence             567999999999999999987655 89999999999999999999976  4999999999999953   4789999999


Q ss_pred             cccccccCCc---------ccccCCCccccccccc
Q 010676          475 LAKATKLNDV---------KSCRGTAFWMAPEVCS  500 (504)
Q Consensus       475 LA~~~~~~~~---------~s~~GT~~YmAPEVL~  500 (504)
                      |++.......         ....||.||++||.|-
T Consensus       619 LSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFv  653 (775)
T KOG1151|consen  619 LSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFV  653 (775)
T ss_pred             hhhhccCCccCcccceeeecccCceeeecCcceee
Confidence            9987654332         2346999999999774


No 346
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic 
Probab=99.91  E-value=2.7e-24  Score=214.08  Aligned_cols=170  Identities=29%  Similarity=0.511  Sum_probs=138.0

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-----
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-----  401 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-----  401 (504)
                      +++|++.+.||+|+||.||+|.+ .++..+++|++........   ....+.+|+.+++.++|+||+++++++..     
T Consensus         7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~---~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~   83 (311)
T cd07866           7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDG---FPITALREIKILKKLKHPNVVPLIDMAVERPDKS   83 (311)
T ss_pred             cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCC---cchhHHHHHHHHHhcCCCCccchhhheecccccc
Confidence            57899999999999999999998 5789999998864332211   11345689999999999999999987643     


Q ss_pred             ---CCeEEEEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          402 ---ESKLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       402 ---~~~lyLVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                         ...+|+||+|+.+ +|...+..  ..+++..+..++.||+.||.|||++||+|+||||+|||++.++.++|+|||++
T Consensus        84 ~~~~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~  162 (311)
T cd07866          84 KRKRGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLHENHILHRDIKAANILIDNQGILKIADFGLA  162 (311)
T ss_pred             cccCceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECcCccc
Confidence               3357999999976 56665543  35999999999999999999999999999999999999999999999999998


Q ss_pred             cccccCC-------------cccccCCCcccccccccC
Q 010676          477 KATKLND-------------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       477 ~~~~~~~-------------~~s~~GT~~YmAPEVL~g  501 (504)
                      .......             .....+++.|+|||++.+
T Consensus       163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  200 (311)
T cd07866         163 RPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLG  200 (311)
T ss_pred             hhccCCCcccccCCcccccccccceeccCcCChHHhhC
Confidence            7543221             122357889999998754


No 347
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=99.91  E-value=5.3e-24  Score=209.00  Aligned_cols=164  Identities=28%  Similarity=0.420  Sum_probs=135.0

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCC--CeEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDE--SKLY  406 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~--~~ly  406 (504)
                      |++.+.||+|+||.||+|.+ .++..||+|.+........   . ....+|+.++.++. |+||+++++++.+.  +.+|
T Consensus         1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~---~-~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~   76 (282)
T cd07831           1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLE---Q-VNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLA   76 (282)
T ss_pred             CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCch---h-hhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEE
Confidence            67889999999999999997 5789999998764322111   1 22346888888885 99999999999887  8899


Q ss_pred             EEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-
Q 010676          407 IFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-  483 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-  483 (504)
                      +||||+.+ +|.+++..  ..+++..+..++.||+.||.|||++||+|+||||+||+++. +.+||+|||++....... 
T Consensus        77 lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~  154 (282)
T cd07831          77 LVFELMDM-NLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMHRNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP  154 (282)
T ss_pred             EEEecCCc-cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence            99999985 67776654  35899999999999999999999999999999999999999 999999999987654322 


Q ss_pred             cccccCCCccccccccc
Q 010676          484 VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       484 ~~s~~GT~~YmAPEVL~  500 (504)
                      .....++..|+|||++.
T Consensus       155 ~~~~~~~~~y~aPE~~~  171 (282)
T cd07831         155 YTEYISTRWYRAPECLL  171 (282)
T ss_pred             cCCCCCCcccCChhHhh
Confidence            23445899999999764


No 348
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=99.91  E-value=5.2e-24  Score=209.53  Aligned_cols=166  Identities=30%  Similarity=0.455  Sum_probs=139.5

Q ss_pred             eeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyLV  408 (504)
                      |++.+.||+|+||.||+|+.. ++..|++|.+.......    ......+|+..+..++ |+||+++++++..++..|+|
T Consensus         1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~----~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv   76 (283)
T cd07830           1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSW----EECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFV   76 (283)
T ss_pred             CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccch----hHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEE
Confidence            678899999999999999984 68899999875322211    1123446889999999 99999999999999999999


Q ss_pred             EEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-c
Q 010676          409 LELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-V  484 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~  484 (504)
                      |||+ +++|.+++...   .+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++....... .
T Consensus        77 ~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~  155 (283)
T cd07830          77 FEYM-EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPY  155 (283)
T ss_pred             EecC-CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCc
Confidence            9999 77888877653   58999999999999999999999999999999999999999999999999987654332 3


Q ss_pred             ccccCCCcccccccccC
Q 010676          485 KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL~g  501 (504)
                      ....++..|+|||++.+
T Consensus       156 ~~~~~~~~~~aPE~~~~  172 (283)
T cd07830         156 TDYVSTRWYRAPEILLR  172 (283)
T ss_pred             CCCCCcccccCceeeec
Confidence            34568999999998754


No 349
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=99.91  E-value=7e-24  Score=209.41  Aligned_cols=163  Identities=22%  Similarity=0.342  Sum_probs=133.9

Q ss_pred             ccceeeeeee--cccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCC
Q 010676          328 ITYWQKGDLL--GRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDES  403 (504)
Q Consensus       328 ~~~y~i~k~L--G~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~  403 (504)
                      .++|.+.+.+  |.|+||.||++.. .++..+++|.+.......          .|+.....+ +|+||+++++++...+
T Consensus        13 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~----------~e~~~~~~~~~h~~iv~~~~~~~~~~   82 (267)
T PHA03390         13 LKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNA----------IEPMVHQLMKDNPNFIKLYYSVTTLK   82 (267)
T ss_pred             HHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcch----------hhHHHHHHhhcCCCEEEEEEEEecCC
Confidence            4456666665  9999999999997 578899999876422110          122222222 6999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-cEEEEecCccccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-SVKLADFGLAKATKL  481 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-~VKL~DFGLA~~~~~  481 (504)
                      .+|+||||+++++|.+++... .+++..+..++.||+.||.|||+.|++||||||+||+++.++ .++|+|||++.....
T Consensus        83 ~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~l~dfg~~~~~~~  162 (267)
T PHA03390         83 GHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKIIRQLVEALNDLHKHNIIHNDIKLENVLYDRAKDRIYLCDYGLCKIIGT  162 (267)
T ss_pred             eeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEeCCCCeEEEecCccceecCC
Confidence            999999999999999998765 689999999999999999999999999999999999999988 999999999875542


Q ss_pred             CCcccccCCCcccccccccCC
Q 010676          482 NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      .  ....++..|+|||++.+.
T Consensus       163 ~--~~~~~~~~y~aPE~~~~~  181 (267)
T PHA03390        163 P--SCYDGTLDYFSPEKIKGH  181 (267)
T ss_pred             C--ccCCCCCcccChhhhcCC
Confidence            2  234689999999998764


No 350
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=99.91  E-value=3e-24  Score=215.23  Aligned_cols=166  Identities=33%  Similarity=0.541  Sum_probs=143.0

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |.....||+|+||.||++.. .++..||+|.+....     ......+.+|+.+++.++|+||+++++.+...+.+|+||
T Consensus        22 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~-----~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~   96 (292)
T cd06657          22 LDNFIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRK-----QQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVM   96 (292)
T ss_pred             hhhHHHcCCCCCeEEEEEEEcCCCeEEEEEEecccc-----hhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEE
Confidence            33346799999999999988 688999999875322     123456889999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--Ccccc
Q 010676          410 ELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSC  487 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~  487 (504)
                      ||+++++|.+++....+++..+..++.|++.+|.|||++|++|+||+|+||+++.++.++|+|||++......  .....
T Consensus        97 e~~~~~~L~~~~~~~~~~~~~~~~~~~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~  176 (292)
T cd06657          97 EFLEGGALTDIVTHTRMNEEQIAAVCLAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSL  176 (292)
T ss_pred             ecCCCCcHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceeccccccccccc
Confidence            9999999999988878999999999999999999999999999999999999999999999999998654322  22335


Q ss_pred             cCCCcccccccccC
Q 010676          488 RGTAFWMAPEVCSN  501 (504)
Q Consensus       488 ~GT~~YmAPEVL~g  501 (504)
                      .||+.|+|||++.+
T Consensus       177 ~~~~~y~~pE~~~~  190 (292)
T cd06657         177 VGTPYWMAPELISR  190 (292)
T ss_pred             ccCccccCHHHhcC
Confidence            68999999998864


No 351
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase,  Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the 
Probab=99.91  E-value=2.4e-24  Score=219.37  Aligned_cols=170  Identities=24%  Similarity=0.464  Sum_probs=141.1

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC----C
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD----E  402 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~----~  402 (504)
                      .++|.+.+.||+|+||.||+|.+ .++..|++|.+......   ......+.+|+.+|+.++||||+++++++..    .
T Consensus         4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~---~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~   80 (334)
T cd07855           4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDV---PTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADF   80 (334)
T ss_pred             hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEecccccc---ccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCC
Confidence            36899999999999999999998 57999999988643221   1234567789999999999999999988753    4


Q ss_pred             CeEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      ..+|+||||+. ++|.+++.. ..+++..+..++.||+.||.|||++||+||||||+|||++.++.+||+|||++.....
T Consensus        81 ~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~  159 (334)
T cd07855          81 KDVYVVMDLME-SDLHHIIHSDQPLTEEHIRYFLYQLLRGLKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSS  159 (334)
T ss_pred             ceEEEEEehhh-hhHHHHhccCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecc
Confidence            56899999996 478887754 4589999999999999999999999999999999999999999999999999876432


Q ss_pred             CC------cccccCCCcccccccccC
Q 010676          482 ND------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       482 ~~------~~s~~GT~~YmAPEVL~g  501 (504)
                      ..      .....|+..|+|||++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~y~~PE~~~~  185 (334)
T cd07855         160 SPTEHKYFMTEYVATRWYRAPELLLS  185 (334)
T ss_pred             cCcCCCcccccccccccccChHHhcC
Confidence            22      123468999999998754


No 352
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=99.91  E-value=3.6e-24  Score=218.60  Aligned_cols=171  Identities=29%  Similarity=0.463  Sum_probs=141.4

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC---
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE---  402 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~---  402 (504)
                      +.++|.+.+.||+|+||+||+|.+ .++..||||.+.....   .......+.+|+.+++.++|+||+++++++...   
T Consensus         3 ~~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~   79 (337)
T cd07858           3 VDTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFD---NRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHRE   79 (337)
T ss_pred             cccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEeccccc---ccchhHHHHHHHHHHHhcCCCCccchHHheeccccc
Confidence            345799999999999999999998 5789999998764221   112234567899999999999999999987654   


Q ss_pred             --CeEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          403 --SKLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       403 --~~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                        ..+|+||||+. ++|.+++.. ..+++..+..++.||+.||.|||+++++|+||||+|||++.++.+||+|||++...
T Consensus        80 ~~~~~~lv~e~~~-~~L~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~  158 (337)
T cd07858          80 AFNDVYIVYELMD-TDLHQIIRSSQTLSDDHCQYFLYQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTT  158 (337)
T ss_pred             ccCcEEEEEeCCC-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCcccccc
Confidence              34899999997 578877755 45899999999999999999999999999999999999999999999999998765


Q ss_pred             ccC--CcccccCCCcccccccccC
Q 010676          480 KLN--DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       480 ~~~--~~~s~~GT~~YmAPEVL~g  501 (504)
                      ...  ......+|..|+|||++.+
T Consensus       159 ~~~~~~~~~~~~~~~y~aPE~~~~  182 (337)
T cd07858         159 SEKGDFMTEYVVTRWYRAPELLLN  182 (337)
T ss_pred             CCCcccccccccccCccChHHHhc
Confidence            432  1234468899999998764


No 353
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=99.91  E-value=3.6e-24  Score=208.53  Aligned_cols=171  Identities=27%  Similarity=0.432  Sum_probs=138.9

Q ss_pred             ceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +|.+.+.||+|+||.||++.+. .+..+++|.++..............+.+|+.+++.++||||+++++++.....+|+|
T Consensus         1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv   80 (260)
T cd08222           1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII   80 (260)
T ss_pred             CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence            4889999999999999999884 455566666554332222222234566889999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          409 LELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       409 mEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      |||+.+++|.+++..     ..+++..++.++.|++.||.|||++|++|+||||+||+++. +.++|+|||++.......
T Consensus        81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~~~~~  159 (260)
T cd08222          81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMHQRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLLMGSC  159 (260)
T ss_pred             EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHHHcCccccCCChhheEeec-CCEeecccCceeecCCCc
Confidence            999999999988753     34889999999999999999999999999999999999964 679999999987654322


Q ss_pred             --cccccCCCcccccccccC
Q 010676          484 --VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 --~~s~~GT~~YmAPEVL~g  501 (504)
                        .....|++.|+|||.+.+
T Consensus       160 ~~~~~~~~~~~~~~pe~~~~  179 (260)
T cd08222         160 DLATTFTGTPYYMSPEALKH  179 (260)
T ss_pred             ccccCCCCCcCccCHHHHcc
Confidence              234458899999998764


No 354
>PHA02882 putative serine/threonine kinase; Provisional
Probab=99.91  E-value=1e-23  Score=211.30  Aligned_cols=173  Identities=23%  Similarity=0.378  Sum_probs=127.1

Q ss_pred             cceeeeeeecccCceeEEEEEccC----CceEEEEEEeccccchhhHHH------HHHHHHHHHHHhhCCCCceeEEeee
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDD----GFFFAVKEVSLLDQGSQAKQS------ISQLEQEIALLSRFEHENIVQYYGT  398 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~----g~~vAVK~v~~~~~~~~~~~~------~~~~~~Ei~iL~~L~HpnIV~l~~~  398 (504)
                      ++|++.++||+|+||.||+|...+    +..+++|..............      ......++..+..+.|+||++++++
T Consensus        12 ~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~   91 (294)
T PHA02882         12 KEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYGC   91 (294)
T ss_pred             CceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEEe
Confidence            589999999999999999998743    456666654332211111100      0112234455667789999999987


Q ss_pred             ecCCC----eEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEec
Q 010676          399 DKDES----KLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       399 ~~~~~----~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                      +....    ..|++|+++.. ++.+++.... .++..+..++.|++.||.|||+++|+||||||+|||++.++.++|+||
T Consensus        92 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~iiHrDiKp~Nill~~~~~~~l~DF  170 (294)
T PHA02882         92 GSFKRCRMYYRFILLEKLVE-NTKEIFKRIKCKNKKLIKNIMKDMLTTLEYIHEHGISHGDIKPENIMVDGNNRGYIIDY  170 (294)
T ss_pred             eeEecCCceEEEEEEehhcc-CHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCcEEEEEc
Confidence            65443    34778887754 5666665543 678888999999999999999999999999999999999999999999


Q ss_pred             CcccccccCC---------cccccCCCcccccccccCC
Q 010676          474 GLAKATKLND---------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~~---------~~s~~GT~~YmAPEVL~g~  502 (504)
                      |+++....+.         .....||+.|||||++.+.
T Consensus       171 Gla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~  208 (294)
T PHA02882        171 GIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGA  208 (294)
T ss_pred             CCceeeccCCcccccccccccccCCCccccCHHHhCCC
Confidence            9997643211         1234699999999998765


No 355
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=99.91  E-value=5.6e-24  Score=217.92  Aligned_cols=168  Identities=30%  Similarity=0.482  Sum_probs=140.0

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC----
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE----  402 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~----  402 (504)
                      ..+|.+.+.||.|+||.||+|.+ .++..|++|.+.....     .....+.+|+.+++.++||||+++++.+...    
T Consensus         4 ~~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~-----~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~   78 (342)
T cd07854           4 GSRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDP-----QSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDL   78 (342)
T ss_pred             CcceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCC-----chHHHHHHHHHHHHhcCCCcchhhHhhhccccccc
Confidence            46899999999999999999998 5789999998865432     2235677899999999999999999766543    


Q ss_pred             ----------CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEc-CCCcEEEE
Q 010676          403 ----------SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVD-ANGSVKLA  471 (504)
Q Consensus       403 ----------~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd-~~g~VKL~  471 (504)
                                ..+|+||||+.+ +|.+++....+++..+..++.||+.||.|||++||+||||||+||+++ .++.++|+
T Consensus        79 ~~~~~~~~~~~~~~lv~e~~~~-~L~~~~~~~~l~~~~~~~~~~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~  157 (342)
T cd07854          79 TEDVGSLTELNSVYIVQEYMET-DLANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIG  157 (342)
T ss_pred             ccccccccccceEEEEeecccc-cHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEEC
Confidence                      358999999974 898888887899999999999999999999999999999999999997 45678999


Q ss_pred             ecCcccccccCC-----cccccCCCcccccccccC
Q 010676          472 DFGLAKATKLND-----VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       472 DFGLA~~~~~~~-----~~s~~GT~~YmAPEVL~g  501 (504)
                      |||++.......     .....++..|+|||++.+
T Consensus       158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~  192 (342)
T cd07854         158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLS  192 (342)
T ss_pred             CcccceecCCccccccccccccccccccCHHHHhC
Confidence            999987543211     122357889999998653


No 356
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=99.91  E-value=4.6e-24  Score=218.65  Aligned_cols=171  Identities=29%  Similarity=0.470  Sum_probs=145.2

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      .+.++|++.+.||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.+++.++|+||+++++++.....
T Consensus        12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~   88 (343)
T cd07851          12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQ---SAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASS   88 (343)
T ss_pred             cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccc---hhhHHHHHHHHHHHHHhccCCCHHHHHHHhhcccc
Confidence            4566899999999999999999998 5788999998753211   12233557789999999999999999988766554


Q ss_pred             ------EEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          405 ------LYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       405 ------lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                            +|+|+||+ +++|.+++....+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++..
T Consensus        89 ~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~~ql~~aL~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~  167 (343)
T cd07851          89 LEDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLVYQILRGLKYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARH  167 (343)
T ss_pred             ccccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEcccccccc
Confidence                  89999999 56999999888899999999999999999999999999999999999999999999999999876


Q ss_pred             cccCCcccccCCCcccccccccC
Q 010676          479 TKLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       479 ~~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      .... .....+|..|+|||++.+
T Consensus       168 ~~~~-~~~~~~~~~y~aPE~~~~  189 (343)
T cd07851         168 TDDE-MTGYVATRWYRAPEIMLN  189 (343)
T ss_pred             cccc-ccCCcccccccCHHHHhC
Confidence            5433 344568999999998764


No 357
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=99.91  E-value=7.4e-24  Score=207.73  Aligned_cols=168  Identities=30%  Similarity=0.499  Sum_probs=142.2

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |++.+.||+|++|.||+|.+ .++..+++|.+......   ......+.+|+.+++.++|+||+++++++...+.+|+||
T Consensus         1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~---~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~   77 (283)
T cd05118           1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFES---EGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVF   77 (283)
T ss_pred             CccceeeecCCCceEEEEEcCCCCcEEEEEEecccccc---chhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEE
Confidence            56778899999999999998 57899999987643222   123356778999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--cc
Q 010676          410 ELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VK  485 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~  485 (504)
                      ||+++ +|..++...  .+++..+..++.||+.||.|||++||+|+||||+||+++.++.++|+|||++.......  ..
T Consensus        78 e~~~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~  156 (283)
T cd05118          78 EFMDT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYT  156 (283)
T ss_pred             eccCC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCccccc
Confidence            99986 787777654  68999999999999999999999999999999999999999999999999987654432  22


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...++..|+|||++.+.
T Consensus       157 ~~~~~~~~~~PE~~~~~  173 (283)
T cd05118         157 HYVVTRWYRAPELLLGD  173 (283)
T ss_pred             CccCcccccCcHHHhcC
Confidence            34588899999988654


No 358
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=99.91  E-value=5e-24  Score=208.15  Aligned_cols=164  Identities=33%  Similarity=0.492  Sum_probs=134.2

Q ss_pred             eeecccCceeEEEEEccC-------CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          335 DLLGRGSFGSVYEGISDD-------GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~-------g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      +.||+|+||.||+|+..+       +..+++|.+....    .......+.+|+.+++.++||||+++++++......|+
T Consensus         1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~----~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~   76 (269)
T cd05044           1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGA----TDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYI   76 (269)
T ss_pred             CccccccceeEEeeeecccccCcccceeehhhhhhccc----chhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEE
Confidence            368999999999998632       2578888764321    11234567889999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHhc--------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-----cEEEEecC
Q 010676          408 FLELVTKGSLLNLYQRY--------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-----SVKLADFG  474 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~--------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-----~VKL~DFG  474 (504)
                      ||||+++++|.+++...        .+++..+..++.||+.||.|||+++++|+||||+|||++.++     .++|+|||
T Consensus        77 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg  156 (269)
T cd05044          77 IMELMEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG  156 (269)
T ss_pred             EEeccCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence            99999999999988642        367788999999999999999999999999999999999877     89999999


Q ss_pred             cccccccCCc----ccccCCCcccccccccCC
Q 010676          475 LAKATKLNDV----KSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       475 LA~~~~~~~~----~s~~GT~~YmAPEVL~g~  502 (504)
                      ++........    ....++..|+|||++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~  188 (269)
T cd05044         157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDG  188 (269)
T ss_pred             cccccccccccccCcccCCCccccCHHHHccC
Confidence            9875433221    122357889999998764


No 359
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the 
Probab=99.91  E-value=1.1e-23  Score=202.81  Aligned_cols=164  Identities=34%  Similarity=0.534  Sum_probs=141.5

Q ss_pred             ecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||+|+||.||++.+ .++..+++|.+.....  ........+..|+.+++.++|+||+++++.+..+..+|+||||+.++
T Consensus         1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~   78 (250)
T cd05123           1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKI--IKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGG   78 (250)
T ss_pred             CCCCCceEEEEEEECCCCcEEEEEEeehhhh--cchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCC
Confidence            69999999999998 4689999998864322  12234567889999999999999999999999999999999999999


Q ss_pred             CHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC--CcccccCCCc
Q 010676          416 SLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSCRGTAF  492 (504)
Q Consensus       416 sL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~~GT~~  492 (504)
                      +|.+++... .+++..+..++.|++.||.|||+++++|+||+|.||+++.++.++|+|||++......  ......++..
T Consensus        79 ~L~~~l~~~~~l~~~~~~~~~~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05123          79 ELFSHLSKEGRFSEERARFYAAEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGTPE  158 (250)
T ss_pred             cHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCCcc
Confidence            999988765 5899999999999999999999999999999999999999999999999998765443  2344568999


Q ss_pred             ccccccccCC
Q 010676          493 WMAPEVCSNP  502 (504)
Q Consensus       493 YmAPEVL~g~  502 (504)
                      |++||++.+.
T Consensus       159 ~~~Pe~~~~~  168 (250)
T cd05123         159 YLAPEVLLGK  168 (250)
T ss_pred             ccChHHhCCC
Confidence            9999988654


No 360
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=99.91  E-value=6.9e-24  Score=209.89  Aligned_cols=168  Identities=27%  Similarity=0.435  Sum_probs=138.0

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyL  407 (504)
                      +|...+.||+|+||.||++.+ .++..+|+|.+......    .....+.+|+.++.++. |+||+++++++......|+
T Consensus         5 ~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~----~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~   80 (288)
T cd06616           5 DLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDE----KEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWI   80 (288)
T ss_pred             HhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccCh----HHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEE
Confidence            566778899999999999998 57899999987643221    33456788999999986 9999999999999999999


Q ss_pred             EEEeccCCCHHHHHH------hcCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          408 FLELVTKGSLLNLYQ------RYHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       408 VmEy~~ggsL~~ll~------~~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      +|||+.. +|.+++.      ...+++..+..++.|++.||+|||+ .+|+||||||+|||++.++.++|+|||++....
T Consensus        81 ~~e~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~  159 (288)
T cd06616          81 CMELMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV  159 (288)
T ss_pred             EEecccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence            9999875 5544332      2458899999999999999999997 499999999999999999999999999987543


Q ss_pred             cCC-cccccCCCcccccccccCC
Q 010676          481 LND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       481 ~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ... .....||..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~y~aPE~~~~~  182 (288)
T cd06616         160 DSIAKTRDAGCRPYMAPERIDPS  182 (288)
T ss_pred             cCCccccccCccCccCHHHhccc
Confidence            322 2334689999999998754


No 361
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the 
Probab=99.91  E-value=5.4e-24  Score=208.59  Aligned_cols=168  Identities=32%  Similarity=0.508  Sum_probs=142.7

Q ss_pred             eeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |++.+.||+|+||.||+|+. .++..|++|.+.....   .......+.+|+.+++.++|+||+++++++.....+|+||
T Consensus         1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~---~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~   77 (282)
T cd07829           1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNE---EEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVF   77 (282)
T ss_pred             CeeehcccccCcceEEEeeecCCCcEEEEEEeccccc---cccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEe
Confidence            56778899999999999998 4699999998875431   1122355678999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC--cc
Q 010676          410 ELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND--VK  485 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~--~~  485 (504)
                      ||+.+ +|.+++...  .+++..+..++.|++.||.|||++||+|+||+|+||+++.++.++|+|||++.......  ..
T Consensus        78 e~~~~-~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~  156 (282)
T cd07829          78 EYCDM-DLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYT  156 (282)
T ss_pred             cCcCc-CHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccC
Confidence            99985 899988775  68999999999999999999999999999999999999999999999999987654332  22


Q ss_pred             cccCCCcccccccccCC
Q 010676          486 SCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       486 s~~GT~~YmAPEVL~g~  502 (504)
                      ...++..|+|||++.++
T Consensus       157 ~~~~~~~~~aPE~~~~~  173 (282)
T cd07829         157 HEVVTLWYRAPEILLGS  173 (282)
T ss_pred             ccccCcCcCChHHhcCC
Confidence            34467889999988654


No 362
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=99.91  E-value=8e-24  Score=215.40  Aligned_cols=168  Identities=31%  Similarity=0.498  Sum_probs=136.0

Q ss_pred             ceeeeeeecccCceeEEEEEcc-C--CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecC----
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD-D--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKD----  401 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~-~--g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~----  401 (504)
                      +|.+.+.||+|+||.||++.+. +  +..||+|.+......   ....+.+.+|+.+++.+ +|+||+++++.+..    
T Consensus         1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~---~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~   77 (332)
T cd07857           1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSK---KILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGN   77 (332)
T ss_pred             CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEecccccc---chhHHHHHHHHHHHHHhcCCCChheeeeeeeecccc
Confidence            4888999999999999999984 4  789999987532211   22245677899999998 59999999986432    


Q ss_pred             CCeEEEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          402 ESKLYIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      ...+|++|+|+. ++|..++.. ..+++..++.++.||+.||.|||++||+||||||+|||++.++.+||+|||+++...
T Consensus        78 ~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~~qi~~aL~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~  156 (332)
T cd07857          78 FNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFIYQILCGLKYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFS  156 (332)
T ss_pred             CCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecc
Confidence            245889999987 478877754 568999999999999999999999999999999999999999999999999987543


Q ss_pred             cCC------cccccCCCcccccccccC
Q 010676          481 LND------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~~------~~s~~GT~~YmAPEVL~g  501 (504)
                      ...      .....||..|+|||++.+
T Consensus       157 ~~~~~~~~~~~~~~g~~~y~aPE~~~~  183 (332)
T cd07857         157 ENPGENAGFMTEYVATRWYRAPEIMLS  183 (332)
T ss_pred             cccccccccccCcccCccccCcHHHhC
Confidence            221      223468999999998754


No 363
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=99.91  E-value=1.9e-23  Score=211.23  Aligned_cols=167  Identities=34%  Similarity=0.563  Sum_probs=141.3

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ..|...+.||+|+||.||++.+ .++..+++|.+......  .......+.+|+.+++.++|+|++++++++...+..|+
T Consensus        25 ~~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l  102 (317)
T cd06635          25 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQ--SNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWL  102 (317)
T ss_pred             hhhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCC--chHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEE
Confidence            4588889999999999999997 57889999987643222  22334678899999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHH--hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          408 FLELVTKGSLLNLYQ--RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~--~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      ||||+.+ +|.+++.  ...+++..+..++.||+.||.|||+++|+|+||+|+||+++.++.++|+|||++.....  ..
T Consensus       103 v~e~~~g-~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~--~~  179 (317)
T cd06635         103 VMEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASP--AN  179 (317)
T ss_pred             EEeCCCC-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCC--cc
Confidence            9999986 6766664  34588899999999999999999999999999999999999999999999999865432  23


Q ss_pred             cccCCCccccccccc
Q 010676          486 SCRGTAFWMAPEVCS  500 (504)
Q Consensus       486 s~~GT~~YmAPEVL~  500 (504)
                      ...|++.|+|||++.
T Consensus       180 ~~~~~~~y~aPE~~~  194 (317)
T cd06635         180 SFVGTPYWMAPEVIL  194 (317)
T ss_pred             cccCCccccChhhhh
Confidence            346899999999873


No 364
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=99.91  E-value=1.2e-23  Score=205.92  Aligned_cols=169  Identities=25%  Similarity=0.393  Sum_probs=136.1

Q ss_pred             eeeeeeecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC---
Q 010676          331 WQKGDLLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES---  403 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~---  403 (504)
                      |.+.+.||+|+||.||+|..    .++..+|||++.....   .......+.+|+.+++.++||||+++++++....   
T Consensus         1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~---~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~   77 (273)
T cd05074           1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIF---SSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKG   77 (273)
T ss_pred             CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccC---ChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCC
Confidence            56788999999999999985    2578999998854221   1223466889999999999999999999875432   


Q ss_pred             ---eEEEEEEeccCCCHHHHHHhc-------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEec
Q 010676          404 ---KLYIFLELVTKGSLLNLYQRY-------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADF  473 (504)
Q Consensus       404 ---~lyLVmEy~~ggsL~~ll~~~-------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DF  473 (504)
                         ..+++++|+.+++|..++...       .++...+..++.||+.||.|||++||+||||||+||+++.++.+||+||
T Consensus        78 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~df  157 (273)
T cd05074          78 RLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADF  157 (273)
T ss_pred             cccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcc
Confidence               247889999999998876421       3678889999999999999999999999999999999999999999999


Q ss_pred             CcccccccCC----cccccCCCcccccccccCC
Q 010676          474 GLAKATKLND----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       474 GLA~~~~~~~----~~s~~GT~~YmAPEVL~g~  502 (504)
                      |+++......    .....+++.|++||.+.++
T Consensus       158 g~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~  190 (273)
T cd05074         158 GLSKKIYSGDYYRQGCASKLPVKWLALESLADN  190 (273)
T ss_pred             cccccccCCcceecCCCccCchhhcCHhHHhcC
Confidence            9987653322    1223356789999988754


No 365
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=99.91  E-value=2.4e-23  Score=204.48  Aligned_cols=168  Identities=33%  Similarity=0.502  Sum_probs=137.6

Q ss_pred             eeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC---CCCceeEEeeeecCCCe--
Q 010676          331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---EHENIVQYYGTDKDESK--  404 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~~~~--  404 (504)
                      |++.+.||+|+||.||+|.+. ++..||+|.+.......   .....+.+|+.++..+   +|+||+++++++...+.  
T Consensus         1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~---~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~   77 (287)
T cd07838           1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEE---GIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDR   77 (287)
T ss_pred             CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccc---hhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCC
Confidence            678899999999999999985 58999999986533211   1123455677666555   69999999999988776  


Q ss_pred             ---EEEEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          405 ---LYIFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       405 ---lyLVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                         +|++|||+.+ +|.+++...   .+++..+..++.|++.||.|||+++++|+||+|+||+++.++.++|+|||++..
T Consensus        78 ~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~  156 (287)
T cd07838          78 ELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARI  156 (287)
T ss_pred             CceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCccee
Confidence               9999999985 788877653   489999999999999999999999999999999999999999999999999876


Q ss_pred             cccCC-cccccCCCcccccccccCC
Q 010676          479 TKLND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       479 ~~~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ..... .....++..|+|||++.++
T Consensus       157 ~~~~~~~~~~~~~~~~~~PE~~~~~  181 (287)
T cd07838         157 YSFEMALTSVVVTLWYRAPEVLLQS  181 (287)
T ss_pred             ccCCcccccccccccccChHHhccC
Confidence            54332 2334578899999998764


No 366
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=99.91  E-value=1.1e-23  Score=214.14  Aligned_cols=165  Identities=25%  Similarity=0.411  Sum_probs=135.6

Q ss_pred             eeeccc--CceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEe
Q 010676          335 DLLGRG--SFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLEL  411 (504)
Q Consensus       335 k~LG~G--~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy  411 (504)
                      ..||+|  +||+||++.+ .+|..||+|++......   ....+.+.+|+.+++.++||||++++++|...+.+|+||||
T Consensus         4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~---~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~   80 (328)
T cd08226           4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCT---EEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPF   80 (328)
T ss_pred             HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCC---HHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEec
Confidence            346666  9999999998 58999999988643322   23346788999999999999999999999999999999999


Q ss_pred             ccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-----
Q 010676          412 VTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----  483 (504)
Q Consensus       412 ~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-----  483 (504)
                      +.+++|.+++.+.   .+++..+..++.||+.||.|||++||+||||||+|||++.++.++|+||+.+.......     
T Consensus        81 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~  160 (328)
T cd08226          81 MAYGSANSLLKTYFPEGMSEALIGNILFGALRGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKV  160 (328)
T ss_pred             ccCCCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccc
Confidence            9999999988753   48888999999999999999999999999999999999999999999998643221110     


Q ss_pred             ----cccccCCCcccccccccCC
Q 010676          484 ----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 ----~~s~~GT~~YmAPEVL~g~  502 (504)
                          .....++..|||||++.+.
T Consensus       161 ~~~~~~~~~~~~~y~aPE~~~~~  183 (328)
T cd08226         161 VYDFPQFSTSVLPWLSPELLRQD  183 (328)
T ss_pred             cccccccccCccCccChhhhcCC
Confidence                0112356679999998764


No 367
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=99.91  E-value=1.1e-23  Score=211.26  Aligned_cols=168  Identities=24%  Similarity=0.357  Sum_probs=137.4

Q ss_pred             eeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      |.+++.+|.|+++.||++.. ++..||+|++.....   .......+.+|+.+++.++|+||+++++++...+.+|++||
T Consensus         4 ~~i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~---~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e   79 (314)
T cd08216           4 TLIGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSC---SKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSP   79 (314)
T ss_pred             hhhhHhhcCCceEEEEEecC-CCCEEEEEEEecccc---chhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEe
Confidence            44556666666666666554 789999999865321   22345678999999999999999999999999999999999


Q ss_pred             eccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC----
Q 010676          411 LVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND----  483 (504)
Q Consensus       411 y~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~----  483 (504)
                      |+++++|.+++..   ..+++..+..++.|++.||.|||+++|+|+||||+|||++.++.+||+|||.+.......    
T Consensus        80 ~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~  159 (314)
T cd08216          80 LMAYGSCEDLLKTHFPEGLPELAIAFILKDVLNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQR  159 (314)
T ss_pred             ccCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeecccccccc
Confidence            9999999998875   358889999999999999999999999999999999999999999999999886443211    


Q ss_pred             -----cccccCCCcccccccccCC
Q 010676          484 -----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -----~~s~~GT~~YmAPEVL~g~  502 (504)
                           .....++..|+|||++.+.
T Consensus       160 ~~~~~~~~~~~~~~y~aPE~~~~~  183 (314)
T cd08216         160 VVHDFPKSSVKNLPWLSPEVLQQN  183 (314)
T ss_pred             ccccccccccccccccCHHHhcCC
Confidence                 1223478889999998653


No 368
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=99.91  E-value=9.6e-25  Score=217.84  Aligned_cols=165  Identities=29%  Similarity=0.413  Sum_probs=137.5

Q ss_pred             cccceeee-eeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecC--
Q 010676          327 IITYWQKG-DLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKD--  401 (504)
Q Consensus       327 ~~~~y~i~-k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~--  401 (504)
                      ++++|.+. ++||-|-.|.|..+.. .++..+|+|++.-          ..+..+|+++--.. .|||||++++.|+.  
T Consensus        59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~D----------s~KARrEVeLHw~~s~h~~iV~IidVyeNs~  128 (400)
T KOG0604|consen   59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLD----------SPKARREVELHWMASGHPHIVSIIDVYENSY  128 (400)
T ss_pred             chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhc----------CHHHHhHhhhhhhhcCCCceEEeehhhhhhc
Confidence            44556553 5799999999999987 6899999996631          13345777776555 49999999998754  


Q ss_pred             --CCeEEEEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC---CCcEEEEec
Q 010676          402 --ESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA---NGSVKLADF  473 (504)
Q Consensus       402 --~~~lyLVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~---~g~VKL~DF  473 (504)
                        ..++.+|||+++||.|+..++..+   |++.++..|++||..|+.|||+.+|.||||||+|+|+..   |..+||+||
T Consensus       129 ~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDf  208 (400)
T KOG0604|consen  129 QGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDF  208 (400)
T ss_pred             cCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhcchhhccCChhheeeecCCCCcceEeccc
Confidence              467999999999999999887643   999999999999999999999999999999999999974   456999999


Q ss_pred             Ccccccc-cCCcccccCCCcccccccccC
Q 010676          474 GLAKATK-LNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       474 GLA~~~~-~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      |||+... .....+.|-||+|.||||+..
T Consensus       209 GFAK~t~~~~~L~TPc~TPyYvaPevlg~  237 (400)
T KOG0604|consen  209 GFAKETQEPGDLMTPCFTPYYVAPEVLGP  237 (400)
T ss_pred             ccccccCCCccccCCcccccccCHHHhCc
Confidence            9999866 455677889999999999874


No 369
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=99.91  E-value=3.1e-23  Score=209.66  Aligned_cols=166  Identities=34%  Similarity=0.558  Sum_probs=139.8

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .|...+.||+|+||.||+|++ .++..|++|.+......  .......+.+|+.+++.++|+|++++++++.+.+..|+|
T Consensus        22 ~~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~--~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv   99 (313)
T cd06633          22 IFVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQ--TNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLV   99 (313)
T ss_pred             HhhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccC--chHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEE
Confidence            466778899999999999997 57889999988643222  223345678899999999999999999999999999999


Q ss_pred             EEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCccc
Q 010676          409 LELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKS  486 (504)
Q Consensus       409 mEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s  486 (504)
                      |||+.+ +|.+++..  ..+++.++..++.||+.+|.|||++||+|+||+|+||+++.++.+||+|||++.....  ...
T Consensus       100 ~e~~~~-~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~--~~~  176 (313)
T cd06633         100 MEYCLG-SASDLLEVHKKPLQEVEIAAITHGALQGLAYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSP--ANS  176 (313)
T ss_pred             EecCCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCC--CCC
Confidence            999975 67666643  3488899999999999999999999999999999999999999999999999864322  234


Q ss_pred             ccCCCccccccccc
Q 010676          487 CRGTAFWMAPEVCS  500 (504)
Q Consensus       487 ~~GT~~YmAPEVL~  500 (504)
                      ..|+..|+|||++.
T Consensus       177 ~~~~~~y~aPE~~~  190 (313)
T cd06633         177 FVGTPYWMAPEVIL  190 (313)
T ss_pred             ccccccccChhhcc
Confidence            56899999999974


No 370
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=99.91  E-value=1.5e-23  Score=214.71  Aligned_cols=170  Identities=27%  Similarity=0.452  Sum_probs=139.9

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC--
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE--  402 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~--  402 (504)
                      .+..+|.+.+.||+|+||.||+|.+ .++..||+|.+.....   .......+.+|+.+++.++|+||+++++++...  
T Consensus        12 ~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~   88 (342)
T cd07879          12 ELPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQ---SEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVS   88 (342)
T ss_pred             ccccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccc---cccchhHHHHHHHHHHhcCCCCccchhheeccccc
Confidence            3456899999999999999999997 5789999998754221   112234577899999999999999999988654  


Q ss_pred             ----CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          403 ----SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       403 ----~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                          ..+|+||||+.. +|..++ ...+++..+..++.|++.||.|||++||+||||||+|||++.++.++|+|||+++.
T Consensus        89 ~~~~~~~~lv~e~~~~-~l~~~~-~~~~~~~~~~~~~~qi~~aL~~LH~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~  166 (342)
T cd07879          89 GDEFQDFYLVMPYMQT-DLQKIM-GHPLSEDKVQYLVYQMLCGLKYIHSAGIIHRDLKPGNLAVNEDCELKILDFGLARH  166 (342)
T ss_pred             CCCCceEEEEeccccc-CHHHHH-cCCCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCCCCcC
Confidence                346999999975 676655 34689999999999999999999999999999999999999999999999999876


Q ss_pred             cccCCcccccCCCcccccccccC
Q 010676          479 TKLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       479 ~~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                      .... .....+|..|||||++.+
T Consensus       167 ~~~~-~~~~~~~~~y~aPE~~~~  188 (342)
T cd07879         167 ADAE-MTGYVVTRWYRAPEVILN  188 (342)
T ss_pred             CCCC-CCCceeeecccChhhhcC
Confidence            4332 234468899999999865


No 371
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=99.90  E-value=5.1e-24  Score=208.17  Aligned_cols=175  Identities=27%  Similarity=0.375  Sum_probs=146.3

Q ss_pred             cccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC
Q 010676          323 RFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD  401 (504)
Q Consensus       323 ~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~  401 (504)
                      ......++|++.++||+|||+-||++.. .++..||+|.+....     .+.++..++|+.+.++++|||+++++++...
T Consensus        15 tv~In~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~-----~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~   89 (302)
T KOG2345|consen   15 TVIINNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHS-----QEDIEEALREIDNHRKFNSPNVLRLVDHQLR   89 (302)
T ss_pred             cEEEcCceEEEeeeecCCCceeeeeecccCcccchhhheeeccc-----hHHHHHHHHHHHHHHhhCCcchHHHHHHHHH
Confidence            3334456899999999999999999997 789999999886432     4456778899999999999999999998654


Q ss_pred             CC-----eEEEEEEeccCCCHHHHHHhc-----CCChHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEcCCCcEE
Q 010676          402 ES-----KLYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHDQD--VVHRDIKCANILVDANGSVK  469 (504)
Q Consensus       402 ~~-----~lyLVmEy~~ggsL~~ll~~~-----~l~e~~v~~i~~QIl~gL~yLHs~g--IIHRDLKP~NILLd~~g~VK  469 (504)
                      +.     ..||+++|...|+|.+.++..     .+++.+++.|+.+|+.||++||+..  +.||||||.|||+...+.++
T Consensus        90 ~~~D~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~v  169 (302)
T KOG2345|consen   90 EEKDGKHEAYLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPV  169 (302)
T ss_pred             hhccCceeEEEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhccCCcccccCCCcceeEecCCCceE
Confidence            43     499999999999999987643     3899999999999999999999998  99999999999999999999


Q ss_pred             EEecCcccccccC-----------CcccccCCCcccccccccCC
Q 010676          470 LADFGLAKATKLN-----------DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       470 L~DFGLA~~~~~~-----------~~~s~~GT~~YmAPEVL~g~  502 (504)
                      |.|||.+......           +......|..|.|||+|+-+
T Consensus       170 l~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk  213 (302)
T KOG2345|consen  170 LMDLGSATQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVK  213 (302)
T ss_pred             EEeccCccccceEeechHHHHHHHHHHHHhCCCcccCchheecc
Confidence            9999988643211           11222368999999998743


No 372
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.90  E-value=4e-24  Score=236.17  Aligned_cols=171  Identities=30%  Similarity=0.451  Sum_probs=143.2

Q ss_pred             cceeeeeeecccCceeEEEEEc------cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS------DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~------~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      .+.+..+.||+|.||+||+|..      .+...||||.++..    ...+..++|++|+.+|..|+|||||+|+|.|..+
T Consensus       486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~----a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~  561 (774)
T KOG1026|consen  486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDK----AENQARQDFRREAELLAELQHPNIVRLLGVCREG  561 (774)
T ss_pred             hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhccc----ccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccC
Confidence            3566778899999999999985      35668999976532    2344567899999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc-----------C----CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY-----------H----LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS  467 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~-----------~----l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~  467 (504)
                      +.+|||+|||..|+|.+++.-.           .    ++..+.+.|+.||+.|+.||-++.+|||||-..|+||.++..
T Consensus       562 ~P~~MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~  641 (774)
T KOG1026|consen  562 DPLCMVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLSSHHFVHRDLATRNCLVGENLV  641 (774)
T ss_pred             CeeEEEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHHhCcccccchhhhhceeccceE
Confidence            9999999999999999998532           1    677899999999999999999999999999999999999999


Q ss_pred             EEEEecCcccccccCCcccc----cCCCccccccccc-CCC
Q 010676          468 VKLADFGLAKATKLNDVKSC----RGTAFWMAPEVCS-NPF  503 (504)
Q Consensus       468 VKL~DFGLA~~~~~~~~~s~----~GT~~YmAPEVL~-g~~  503 (504)
                      |||+||||++.+-..+....    .-...||+||-+. |+|
T Consensus       642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kF  682 (774)
T KOG1026|consen  642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKF  682 (774)
T ss_pred             EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcc
Confidence            99999999987554443222    2356799999554 544


No 373
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.90  E-value=1.2e-23  Score=239.15  Aligned_cols=169  Identities=34%  Similarity=0.524  Sum_probs=141.9

Q ss_pred             ceeeeeeecccCceeEEEEEcc--CCc----eEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD--DGF----FFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES  403 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~--~g~----~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~  403 (504)
                      ..++++.||+|.||.||.|...  .|.    .||+|.+...    ...+....|.+|..+++.++|||||+++|.+.+..
T Consensus       693 ~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~----~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~  768 (1025)
T KOG1095|consen  693 NVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRL----SSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSG  768 (1025)
T ss_pred             heEeeeeeccccccceEEEEEecCCCCccceEEEEEecccc----CCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCC
Confidence            4677889999999999999863  343    4777766532    23455678999999999999999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHhc--------CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCc
Q 010676          404 KLYIFLELVTKGSLLNLYQRY--------HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGL  475 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~--------~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGL  475 (504)
                      ..+|++|||.+|+|..++++.        .+....++.++.+|+.|+.||+++++|||||...|+||+....|||+|||+
T Consensus       769 ~~~i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGl  848 (1025)
T KOG1095|consen  769 PPLILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGL  848 (1025)
T ss_pred             CcEEEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccch
Confidence            999999999999999999876        277788999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCccccc----CCCcccccccccCC
Q 010676          476 AKATKLNDVKSCR----GTAFWMAPEVCSNP  502 (504)
Q Consensus       476 A~~~~~~~~~s~~----GT~~YmAPEVL~g~  502 (504)
                      |+.+-........    --..|||||.|..+
T Consensus       849 ArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~  879 (1025)
T KOG1095|consen  849 ARDIYDKDYYRKHGEAMLPVKWMPPESLKDG  879 (1025)
T ss_pred             hHhhhhchheeccCccccceecCCHHHHhhc
Confidence            9954433322221    23569999999843


No 374
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=99.90  E-value=6.4e-23  Score=204.66  Aligned_cols=172  Identities=28%  Similarity=0.445  Sum_probs=139.4

Q ss_pred             ccccceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCC
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDES  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~  403 (504)
                      ...+.|++.+.||+|+||.||+|.+. ++..||||.+......    .....+..|+.++.... |+||+++++++.+..
T Consensus        12 ~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~   87 (296)
T cd06618          12 ADLNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNK----EENKRILMDLDVVLKSHDCPYIVKCYGYFITDS   87 (296)
T ss_pred             CCcchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCCh----HHHHHHHHHHHHHHhccCCCchHhhheeeecCC
Confidence            34568999999999999999999985 5899999988643221    12344556776666654 999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      .+|++|||+.+ +|.+++..  ..+++..+..++.||+.||.|||+ .||+||||+|+||+++.++.+||+|||++....
T Consensus        88 ~~~~v~e~~~~-~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~  166 (296)
T cd06618          88 DVFICMELMST-CLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLV  166 (296)
T ss_pred             eEEEEeeccCc-CHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhcc
Confidence            99999999865 77776654  348888899999999999999997 699999999999999999999999999987643


Q ss_pred             cCC-cccccCCCcccccccccCC
Q 010676          481 LND-VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       481 ~~~-~~s~~GT~~YmAPEVL~g~  502 (504)
                      ... .....++..|+|||++.+.
T Consensus       167 ~~~~~~~~~~~~~y~aPE~~~~~  189 (296)
T cd06618         167 DSKAKTRSAGCAAYMAPERIDPP  189 (296)
T ss_pred             CCCcccCCCCCccccCHhhcCCC
Confidence            222 2334578899999998754


No 375
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=99.90  E-value=5.6e-23  Score=207.08  Aligned_cols=167  Identities=32%  Similarity=0.542  Sum_probs=139.8

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ..|...+.||+|+||.||+|++ .++..+++|.+......  .......+.+|+.+++.++|+|++++++++.....+|+
T Consensus        15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~--~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l   92 (308)
T cd06634          15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQ--SNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWL   92 (308)
T ss_pred             HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEeccccc--ChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEE
Confidence            3477788999999999999998 57889999988643222  12334567789999999999999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcc
Q 010676          408 FLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVK  485 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~  485 (504)
                      ||||+.+ +|.+++..  ..+++..+..++.|++.||.|||+++++|+||||+|||++.++.++|+|||++......  .
T Consensus        93 v~e~~~~-~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~--~  169 (308)
T cd06634          93 VMEYCLG-SASDLLEVHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA--N  169 (308)
T ss_pred             EEEccCC-CHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCc--c
Confidence            9999974 77766543  34888999999999999999999999999999999999999999999999998764432  2


Q ss_pred             cccCCCccccccccc
Q 010676          486 SCRGTAFWMAPEVCS  500 (504)
Q Consensus       486 s~~GT~~YmAPEVL~  500 (504)
                      ...+++.|+|||++.
T Consensus       170 ~~~~~~~y~aPE~~~  184 (308)
T cd06634         170 XFVGTPYWMAPEVIL  184 (308)
T ss_pred             cccCCccccCHHHHh
Confidence            345899999999874


No 376
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.89  E-value=1.1e-22  Score=197.29  Aligned_cols=152  Identities=19%  Similarity=0.266  Sum_probs=127.3

Q ss_pred             cCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCCCHH
Q 010676          340 GSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLL  418 (504)
Q Consensus       340 G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~ggsL~  418 (504)
                      |.||.||++.+ .++..||+|.+....          .+.+|...+....||||+++++++...+.+|+||||+.+++|.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~~----------~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKSS----------EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecchh----------hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHH
Confidence            88999999998 688999999886421          1223444555567999999999999999999999999999999


Q ss_pred             HHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcccccCCCcccccc
Q 010676          419 NLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPE  497 (504)
Q Consensus       419 ~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~GT~~YmAPE  497 (504)
                      +++.. ..+++..+..++.|++.||.|||++||+||||||+||+++.++.++|+|||++...... .....++..|||||
T Consensus        74 ~~l~~~~~l~~~~~~~~~~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~-~~~~~~~~~y~aPE  152 (237)
T cd05576          74 SHISKFLNIPEECVKRWAAEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDS-CDGEAVENMYCAPE  152 (237)
T ss_pred             HHHHHhcCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccc-cccCCcCccccCCc
Confidence            88754 46899999999999999999999999999999999999999999999999987654432 22344678899999


Q ss_pred             cccCC
Q 010676          498 VCSNP  502 (504)
Q Consensus       498 VL~g~  502 (504)
                      ++.++
T Consensus       153 ~~~~~  157 (237)
T cd05576         153 VGGIS  157 (237)
T ss_pred             ccCCC
Confidence            88654


No 377
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.89  E-value=1e-24  Score=215.37  Aligned_cols=169  Identities=32%  Similarity=0.498  Sum_probs=140.0

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCC-----
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDES-----  403 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~-----  403 (504)
                      +.+..+.||-|.||+||.+++ ++|+.+++|.+...   .......+++-+|+++|..++|.|++..++...-..     
T Consensus        54 Di~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnv---fq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFq  130 (449)
T KOG0664|consen   54 DIQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNV---FQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQ  130 (449)
T ss_pred             cCCCCCcccccceeEEEeccCCCCccchhHhhcchH---HHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHH
Confidence            344557899999999999999 79999999976532   233444567889999999999999999988765432     


Q ss_pred             eEEEEEEeccCCCHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLY-QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll-~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .+|.++|++.. +|..++ ....++.+.++-+++||+.||+|||+.||+||||||.|+|++.|..+||||||+|+....+
T Consensus       131 EiYV~TELmQS-DLHKIIVSPQ~Ls~DHvKVFlYQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d  209 (449)
T KOG0664|consen  131 ELYVLTELMQS-DLHKIIVSPQALTPDHVKVFVYQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQR  209 (449)
T ss_pred             HHHHHHHHHHh-hhhheeccCCCCCcchhhhhHHHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchh
Confidence            36888888865 676655 4456899999999999999999999999999999999999999999999999999986655


Q ss_pred             C---cccccCCCcccccccccCC
Q 010676          483 D---VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~---~~s~~GT~~YmAPEVL~g~  502 (504)
                      .   ++..+-|.+|.|||+|+|.
T Consensus       210 ~~~hMTqEVVTQYYRAPEiLMGa  232 (449)
T KOG0664|consen  210 DRLNMTHEVVTQYYRAPELLMGA  232 (449)
T ss_pred             hhhhhHHHHHHHHhccHHHhhcc
Confidence            4   3445679999999999874


No 378
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.89  E-value=2.3e-24  Score=232.15  Aligned_cols=168  Identities=40%  Similarity=0.627  Sum_probs=148.8

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ...+|.++..+|.|+||.||++++ .++...|+|++++....     .+.-+.+||-+++.++|+|||.|++.+...+.+
T Consensus        13 P~ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~d-----d~~~iqqei~~~~dc~h~nivay~gsylr~dkl   87 (829)
T KOG0576|consen   13 PQDDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGD-----DFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKL   87 (829)
T ss_pred             CccchhheeeecCCcccchhhhcccccCchhhheeeeccCCc-----cccccccceeeeecCCCcChHHHHhhhhhhcCc
Confidence            346789999999999999999999 68999999999864332     234567899999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHh-cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccccc--C
Q 010676          406 YIFLELVTKGSLLNLYQR-YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKL--N  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~--~  482 (504)
                      ||.||||.+|+|.+++.- ..+++.++.+.++..+.||+|||+.|-+|||||-.|||++..|.|||+|||.+-.+..  .
T Consensus        88 wicMEycgggslQdiy~~TgplselqiayvcRetl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~  167 (829)
T KOG0576|consen   88 WICMEYCGGGSLQDIYHVTGPLSELQIAYVCRETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIA  167 (829)
T ss_pred             EEEEEecCCCcccceeeecccchhHHHHHHHhhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhh
Confidence            999999999999998865 4599999999999999999999999999999999999999999999999998765442  3


Q ss_pred             CcccccCCCcccccccc
Q 010676          483 DVKSCRGTAFWMAPEVC  499 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL  499 (504)
                      ..+++.||++||||||-
T Consensus       168 KrksfiGtpywmapEva  184 (829)
T KOG0576|consen  168 KRKSFIGTPYWMAPEVA  184 (829)
T ss_pred             hhhcccCCccccchhHH
Confidence            45677899999999984


No 379
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.88  E-value=9.1e-25  Score=213.88  Aligned_cols=172  Identities=27%  Similarity=0.471  Sum_probs=137.5

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC---
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD---  401 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~---  401 (504)
                      ...+.|....+||+|.||.||+|.. .+|+.||+|++.......  .. -....+|+.+|..++|+|++.++..|.+   
T Consensus        14 ~~~~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKe--Gf-pitalreikiL~~lkHenv~nliEic~tk~T   90 (376)
T KOG0669|consen   14 DEVSKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKE--GF-PITALREIKILQLLKHENVVNLIEICRTKAT   90 (376)
T ss_pred             ecchHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhcccc--CC-cHHHHHHHHHHHHhcchhHHHHHHHHhhccC
Confidence            3445677888999999999999998 567788888653211111  11 1234589999999999999999987643   


Q ss_pred             -----CCeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecC
Q 010676          402 -----ESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG  474 (504)
Q Consensus       402 -----~~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFG  474 (504)
                           ...+|+||.+|+. +|.-++...  +++..+++.++.+++.||.|+|...|+|||+|+.|+||+.+|.+||+|||
T Consensus        91 p~~r~r~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFG  169 (376)
T KOG0669|consen   91 PTNRDRATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFG  169 (376)
T ss_pred             CcccccceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccc
Confidence                 2349999999986 777777654  58899999999999999999999999999999999999999999999999


Q ss_pred             cccccccCC------cccccCCCcccccccccC
Q 010676          475 LAKATKLND------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       475 LA~~~~~~~------~~s~~GT~~YmAPEVL~g  501 (504)
                      +++.+....      .+..+-|.+|++||.+.|
T Consensus       170 lar~fs~~~n~~kprytnrvvTLwYrppEllLG  202 (376)
T KOG0669|consen  170 LARAFSTSKNVVKPRYTNRVVTLWYRPPELLLG  202 (376)
T ss_pred             cccceecccccCCCCcccceeeeecCCHHHhhc
Confidence            997654322      233456999999999876


No 380
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.88  E-value=3.8e-22  Score=216.67  Aligned_cols=174  Identities=25%  Similarity=0.345  Sum_probs=128.7

Q ss_pred             ccceeeeeeecccCceeEEEEEc-----------------cCCceEEEEEEeccccchhhH---------HHHHHHHHHH
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-----------------DDGFFFAVKEVSLLDQGSQAK---------QSISQLEQEI  381 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-----------------~~g~~vAVK~v~~~~~~~~~~---------~~~~~~~~Ei  381 (504)
                      .++|.+.++||+|+||+||+|..                 ..+..||||.+..........         ........|+
T Consensus       144 ~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE~  223 (507)
T PLN03224        144 SDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVEA  223 (507)
T ss_pred             ccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHHH
Confidence            45799999999999999999964                 245689999886432211100         0112233567


Q ss_pred             HHHhhCCCCce-----eEEeeeecC--------CCeEEEEEEeccCCCHHHHHHhc------------------------
Q 010676          382 ALLSRFEHENI-----VQYYGTDKD--------ESKLYIFLELVTKGSLLNLYQRY------------------------  424 (504)
Q Consensus       382 ~iL~~L~HpnI-----V~l~~~~~~--------~~~lyLVmEy~~ggsL~~ll~~~------------------------  424 (504)
                      .++.+++|.++     ++++++|..        ....|+||||+.+++|.+++...                        
T Consensus       224 ~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~~  303 (507)
T PLN03224        224 YMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMPQ  303 (507)
T ss_pred             HHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhccc
Confidence            77777766554     666776643        35689999999999999887532                        


Q ss_pred             -CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-ccc--ccCCCccccccccc
Q 010676          425 -HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-VKS--CRGTAFWMAPEVCS  500 (504)
Q Consensus       425 -~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-~~s--~~GT~~YmAPEVL~  500 (504)
                       .+++..++.++.|++.+|.|||+++|+||||||+|||++.++.+||+|||++....... ...  ..+|+.|+|||++.
T Consensus       304 ~~~~~~~~~~i~~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y~aPE~l~  383 (507)
T PLN03224        304 DKRDINVIKGVMRQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRYSPPEELV  383 (507)
T ss_pred             ccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcceeChhhhc
Confidence             12456678899999999999999999999999999999999999999999986543222 111  23588999999875


Q ss_pred             C
Q 010676          501 N  501 (504)
Q Consensus       501 g  501 (504)
                      .
T Consensus       384 ~  384 (507)
T PLN03224        384 M  384 (507)
T ss_pred             C
Confidence            3


No 381
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.88  E-value=6.9e-22  Score=185.92  Aligned_cols=165  Identities=38%  Similarity=0.651  Sum_probs=144.0

Q ss_pred             eeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      |.+.+.||.|++|.||++... ++..+++|.+......    .....+.+|+..++.++|+|++++++++......++++
T Consensus         1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~----~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~   76 (225)
T smart00221        1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTE----KQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVM   76 (225)
T ss_pred             CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccch----HHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEE
Confidence            567889999999999999985 4889999988643322    23567889999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC---Cc
Q 010676          410 ELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN---DV  484 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~---~~  484 (504)
                      ||+.+++|.+++....  +++..+..++.+++.+|.+||+++++|+||+|.||+++.++.++|+|||++......   ..
T Consensus        77 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~  156 (225)
T smart00221       77 EYCEGGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALL  156 (225)
T ss_pred             eccCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccc
Confidence            9999999999987755  889999999999999999999999999999999999999999999999998765543   22


Q ss_pred             ccccCCCcccccccc
Q 010676          485 KSCRGTAFWMAPEVC  499 (504)
Q Consensus       485 ~s~~GT~~YmAPEVL  499 (504)
                      ....++..|++||++
T Consensus       157 ~~~~~~~~~~~pe~~  171 (225)
T smart00221      157 KTVKGTPFYLAPEVL  171 (225)
T ss_pred             cceeccCCcCCHhHh
Confidence            345688899999987


No 382
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.88  E-value=9.1e-23  Score=195.23  Aligned_cols=168  Identities=27%  Similarity=0.442  Sum_probs=138.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ....+..||+|+||.|-+-+. .+|...|+|.+...-.    .+...++.+|+.+.... .+|++|.+|+.......+||
T Consensus        47 ~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn----~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwI  122 (282)
T KOG0984|consen   47 DLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVN----SQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWI  122 (282)
T ss_pred             hhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcC----hHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEE
Confidence            344456799999999988777 7899999999875433    23345677888877654 69999999999999999999


Q ss_pred             EEEeccCCCHHHHHHh-----cCCChHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEcCCCcEEEEecCccccccc
Q 010676          408 FLELVTKGSLLNLYQR-----YHLRDSQVSAYTRQILLGLKYLHDQ-DVVHRDIKCANILVDANGSVKLADFGLAKATKL  481 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~-----~~l~e~~v~~i~~QIl~gL~yLHs~-gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~  481 (504)
                      .||.|.. +|..++.+     ..+++.-+-+|+..++.||.|||++ .+||||+||+||||+.+|+|||||||++..+..
T Consensus       123 cME~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~d  201 (282)
T KOG0984|consen  123 CMELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVD  201 (282)
T ss_pred             eHHHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehh
Confidence            9999975 77766543     3488888999999999999999975 899999999999999999999999999876655


Q ss_pred             CCccc-ccCCCcccccccccCC
Q 010676          482 NDVKS-CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       482 ~~~~s-~~GT~~YmAPEVL~g~  502 (504)
                      ....+ -.|...|||||.+..+
T Consensus       202 SiAkt~daGCkpYmaPEri~~e  223 (282)
T KOG0984|consen  202 SIAKTMDAGCKPYMAPERINPE  223 (282)
T ss_pred             hhHHHHhcCCCccCChhhcCcc
Confidence            54333 4588899999998754


No 383
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.88  E-value=1.9e-22  Score=222.15  Aligned_cols=165  Identities=24%  Similarity=0.328  Sum_probs=118.7

Q ss_pred             cccceeeeeeecccCceeEEEEEcc-C----CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeee---
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISD-D----GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGT---  398 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~-~----g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~---  398 (504)
                      ..++|++.+.||+|+||.||+|++. +    +..||+|.+.....  .     .....+  .+....+.+++.++..   
T Consensus       130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~--~-----e~~~~e--~l~~~~~~~~~~~~~~~~~  200 (566)
T PLN03225        130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGA--V-----EIWMNE--RVRRACPNSCADFVYGFLE  200 (566)
T ss_pred             ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccch--h-----HHHHHH--HHHhhchhhHHHHHHhhhc
Confidence            3568999999999999999999984 5    78999997643211  0     001111  1111122222222211   


Q ss_pred             ---ecCCCeEEEEEEeccCCCHHHHHHhcCCC---------------------hHHHHHHHHHHHHHHHHHHHCCceecC
Q 010676          399 ---DKDESKLYIFLELVTKGSLLNLYQRYHLR---------------------DSQVSAYTRQILLGLKYLHDQDVVHRD  454 (504)
Q Consensus       399 ---~~~~~~lyLVmEy~~ggsL~~ll~~~~l~---------------------e~~v~~i~~QIl~gL~yLHs~gIIHRD  454 (504)
                         ......+|+||||+.+++|.+++....+.                     ...+..|+.||+.||.|||+++|+|||
T Consensus       201 ~~~~~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH~~gIiHRD  280 (566)
T PLN03225        201 PVSSKKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLHSTGIVHRD  280 (566)
T ss_pred             ccccccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHHHCCEEeCc
Confidence               24567799999999999999988654321                     234567999999999999999999999


Q ss_pred             CCCCcEEEcC-CCcEEEEecCcccccccC---CcccccCCCccccccccc
Q 010676          455 IKCANILVDA-NGSVKLADFGLAKATKLN---DVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       455 LKP~NILLd~-~g~VKL~DFGLA~~~~~~---~~~s~~GT~~YmAPEVL~  500 (504)
                      |||+|||++. ++.+||+|||+++.....   ......+|+.|||||++.
T Consensus       281 LKP~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y~APE~~~  330 (566)
T PLN03225        281 VKPQNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRYAAPEQYI  330 (566)
T ss_pred             CCHHHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCccChHHhh
Confidence            9999999985 689999999999764322   124567899999999653


No 384
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=99.88  E-value=1.9e-22  Score=199.48  Aligned_cols=175  Identities=27%  Similarity=0.417  Sum_probs=142.2

Q ss_pred             ccccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeee
Q 010676          322 GRFKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTD  399 (504)
Q Consensus       322 ~~~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~  399 (504)
                      .++..-+++.+++..||.|+.|.|++++. .+|...|||.+.....    ++..+++...+.+.... .+|+||+.+++|
T Consensus        85 ~r~~~dindl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~N----kee~kRILmDldvv~~s~dcpyIV~c~GyF  160 (391)
T KOG0983|consen   85 QRYQADINDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGN----KEENKRILMDLDVVLKSHDCPYIVQCFGYF  160 (391)
T ss_pred             cccccChHHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCC----HHHHHHHHHhhhHHhhccCCCeeeeeeeEE
Confidence            34555566778888999999999999998 5799999999875443    33446677777766554 489999999999


Q ss_pred             cCCCeEEEEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHH-HCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          400 KDESKLYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLH-DQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       400 ~~~~~lyLVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLH-s~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                      ..+..++|-||.|.. .+..++++  ..+++.-+-++...++.||.||- +++|||||+||+|||+|..|++||||||++
T Consensus       161 i~n~dV~IcMelMs~-C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIs  239 (391)
T KOG0983|consen  161 ITNTDVFICMELMST-CAEKLLKRIKGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGIS  239 (391)
T ss_pred             eeCchHHHHHHHHHH-HHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHHhcceeecccCccceEEccCCCEEeeccccc
Confidence            999999999999854 45566654  34788888889999999999997 468999999999999999999999999998


Q ss_pred             ccccc-CCcccccCCCcccccccccC
Q 010676          477 KATKL-NDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       477 ~~~~~-~~~~s~~GT~~YmAPEVL~g  501 (504)
                      ..+.. .......|.+.|||||-+.-
T Consensus       240 GrlvdSkAhtrsAGC~~YMaPERidp  265 (391)
T KOG0983|consen  240 GRLVDSKAHTRSAGCAAYMAPERIDP  265 (391)
T ss_pred             ceeecccccccccCCccccCccccCC
Confidence            76443 34555679999999998864


No 385
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.88  E-value=1.6e-21  Score=178.62  Aligned_cols=161  Identities=42%  Similarity=0.670  Sum_probs=140.8

Q ss_pred             ecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      ||+|.+|.||++... ++..+++|.+.......    ....+.+|+.+++.++|++|+++++++......+++|||+.++
T Consensus         1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~----~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~   76 (215)
T cd00180           1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSS----LLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGG   76 (215)
T ss_pred             CCcCCceEEEEEEecCCCcEEEEEEeccccchh----HHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCC
Confidence            689999999999985 48999999886433221    3466889999999999999999999999999999999999999


Q ss_pred             CHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-CCcEEEEecCcccccccCC--cccccCC
Q 010676          416 SLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKLND--VKSCRGT  490 (504)
Q Consensus       416 sL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-~g~VKL~DFGLA~~~~~~~--~~s~~GT  490 (504)
                      +|.+++...  .++...+..++.+++.+|.+||++|++|+||+|.||+++. ++.++|+|||++.......  .....++
T Consensus        77 ~l~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  156 (215)
T cd00180          77 SLKDLLKENEGKLSEDEILRILLQILEGLEYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGT  156 (215)
T ss_pred             cHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCC
Confidence            999999876  6899999999999999999999999999999999999998 8999999999987665443  3445588


Q ss_pred             CcccccccccC
Q 010676          491 AFWMAPEVCSN  501 (504)
Q Consensus       491 ~~YmAPEVL~g  501 (504)
                      ..|++||++..
T Consensus       157 ~~~~~pe~~~~  167 (215)
T cd00180         157 PAYMAPEVLLG  167 (215)
T ss_pred             CCccChhHhcc
Confidence            89999998865


No 386
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.88  E-value=5e-22  Score=189.73  Aligned_cols=144  Identities=17%  Similarity=0.162  Sum_probs=110.9

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccchhh---------------------HHHHHHHHHHHHHHhhCCCCce
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQA---------------------KQSISQLEQEIALLSRFEHENI  392 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~---------------------~~~~~~~~~Ei~iL~~L~HpnI  392 (504)
                      ...||+|+||.||+|.+.+|..||+|++.........                     ........+|+.++..+.++++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v   81 (190)
T cd05147           2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI   81 (190)
T ss_pred             CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence            4679999999999999889999999998753221110                     0011233569999999987766


Q ss_pred             eEEeeeecCCCeEEEEEEeccCCCHHHH-HHhcCCChHHHHHHHHHHHHHHHHH-HHCCceecCCCCCcEEEcCCCcEEE
Q 010676          393 VQYYGTDKDESKLYIFLELVTKGSLLNL-YQRYHLRDSQVSAYTRQILLGLKYL-HDQDVVHRDIKCANILVDANGSVKL  470 (504)
Q Consensus       393 V~l~~~~~~~~~lyLVmEy~~ggsL~~l-l~~~~l~e~~v~~i~~QIl~gL~yL-Hs~gIIHRDLKP~NILLd~~g~VKL  470 (504)
                      .....+...  ..||||||++|++|... +....++...+..++.|++.+|.|| |+.||+||||||+|||++ ++.++|
T Consensus        82 ~~p~~~~~~--~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~~qi~~~L~~l~H~~giiHrDlkP~NIli~-~~~v~L  158 (190)
T cd05147          82 PCPEPILLK--SHVLVMEFIGDDGWAAPRLKDAPLSESKARELYLQVIQIMRILYQDCRLVHADLSEYNLLYH-DGKLYI  158 (190)
T ss_pred             CCCcEEEec--CCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEE-CCcEEE
Confidence            433322222  23899999999877654 4556789999999999999999999 799999999999999998 588999


Q ss_pred             EecCcccccc
Q 010676          471 ADFGLAKATK  480 (504)
Q Consensus       471 ~DFGLA~~~~  480 (504)
                      +|||+|....
T Consensus       159 iDFG~a~~~~  168 (190)
T cd05147         159 IDVSQSVEHD  168 (190)
T ss_pred             EEccccccCC
Confidence            9999987543


No 387
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.87  E-value=1.3e-21  Score=185.95  Aligned_cols=145  Identities=18%  Similarity=0.170  Sum_probs=114.2

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccch---------------------hhHHHHHHHHHHHHHHhhCCCCce
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGS---------------------QAKQSISQLEQEIALLSRFEHENI  392 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~---------------------~~~~~~~~~~~Ei~iL~~L~HpnI  392 (504)
                      ...||+|+||.||+|.+.+|..||||++.......                     ........+.+|+..+.++.|+++
T Consensus         2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   81 (190)
T cd05145           2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV   81 (190)
T ss_pred             CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence            57899999999999998889999999987542110                     001112335689999999999887


Q ss_pred             eEEeeeecCCCeEEEEEEeccCCCHH-HHHHhcCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEE
Q 010676          393 VQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKL  470 (504)
Q Consensus       393 V~l~~~~~~~~~lyLVmEy~~ggsL~-~ll~~~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL  470 (504)
                      .....+....  .||||||++|+++. ..+....++...+..++.|++.+|.+||. +||+||||||+|||++ ++.++|
T Consensus        82 ~~p~~~~~~~--~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~~~l~~~l~~lH~~~givHrDlkP~NIll~-~~~~~l  158 (190)
T cd05145          82 PVPEPILLKK--NVLVMEFIGDDGSPAPRLKDVPLEEEEAEELYEQVVEQMRRLYQEAGLVHGDLSEYNILYH-DGKPYI  158 (190)
T ss_pred             CCceEEEecC--CEEEEEEecCCCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCChhhEEEE-CCCEEE
Confidence            4443333222  48999999988554 34566678888999999999999999999 9999999999999998 899999


Q ss_pred             EecCccccccc
Q 010676          471 ADFGLAKATKL  481 (504)
Q Consensus       471 ~DFGLA~~~~~  481 (504)
                      +|||++.....
T Consensus       159 iDFG~a~~~~~  169 (190)
T cd05145         159 IDVSQAVELDH  169 (190)
T ss_pred             EEcccceecCC
Confidence            99999986543


No 388
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=99.87  E-value=1.9e-22  Score=215.56  Aligned_cols=171  Identities=29%  Similarity=0.475  Sum_probs=146.2

Q ss_pred             ccccccceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      |..-..+..+.++||-|.||.||.|.++ -.-.||||.++      ...-.+.+|+.|..+++.++|||+|+|+++|..+
T Consensus       262 WEmeRtdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLK------EDtMeveEFLkEAAvMKeikHpNLVqLLGVCT~E  335 (1157)
T KOG4278|consen  262 WEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK------EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTHE  335 (1157)
T ss_pred             hhccchheeeeeccCCCcccceeeeeeeccceeeehhhhh------hcchhHHHHHHHHHHHHhhcCccHHHHhhhhccC
Confidence            3333345667789999999999999984 45678999765      2233467899999999999999999999999999


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ..+|||+|||..|+|.+|++++.   ++.-.+++++.||..|++||.++++|||||...|.|+.++..|||+||||++..
T Consensus       336 pPFYIiTEfM~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlM  415 (1157)
T KOG4278|consen  336 PPFYIITEFMCYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLM  415 (1157)
T ss_pred             CCeEEEEecccCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhh
Confidence            99999999999999999998765   555667888999999999999999999999999999999999999999999998


Q ss_pred             ccCCcccccC---CCccccccccc
Q 010676          480 KLNDVKSCRG---TAFWMAPEVCS  500 (504)
Q Consensus       480 ~~~~~~s~~G---T~~YmAPEVL~  500 (504)
                      ..+..+...|   .+.|.|||-|.
T Consensus       416 tgDTYTAHAGAKFPIKWTAPEsLA  439 (1157)
T KOG4278|consen  416 TGDTYTAHAGAKFPIKWTAPESLA  439 (1157)
T ss_pred             cCCceecccCccCcccccCccccc
Confidence            8777665555   44599999764


No 389
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=99.87  E-value=7.7e-22  Score=228.23  Aligned_cols=162  Identities=24%  Similarity=0.402  Sum_probs=134.6

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      +...|...+.||+|+||.||+|.. .++..||+|.+......         ...|+.++++++|||||++++++.+.+.+
T Consensus       688 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~---------~~~~~~~l~~l~HpnIv~~~~~~~~~~~~  758 (968)
T PLN00113        688 ILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVNSI---------PSSEIADMGKLQHPNIVKLIGLCRSEKGA  758 (968)
T ss_pred             HHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCccc---------cHHHHHHHhhCCCCCcceEEEEEEcCCCC
Confidence            344567778999999999999998 68899999987532211         12457889999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHH---HCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          406 YIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLH---DQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLH---s~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      |+||||+++|+|.++++.  +++..+..|+.||+.||+|||   ..+|+||||||+||+++.++..++. ||........
T Consensus       759 ~lv~Ey~~~g~L~~~l~~--l~~~~~~~i~~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~  835 (968)
T PLN00113        759 YLIHEYIEGKNLSEVLRN--LSWERRRKIAIGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTD  835 (968)
T ss_pred             EEEEeCCCCCcHHHHHhc--CCHHHHHHHHHHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccC
Confidence            999999999999999864  888999999999999999999   6699999999999999998888775 6665433221


Q ss_pred             CcccccCCCcccccccccCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~  502 (504)
                        ....+|+.|||||++.++
T Consensus       836 --~~~~~t~~y~aPE~~~~~  853 (968)
T PLN00113        836 --TKCFISSAYVAPETRETK  853 (968)
T ss_pred             --CCccccccccCcccccCC
Confidence              233689999999998764


No 390
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=99.86  E-value=8.1e-22  Score=211.09  Aligned_cols=166  Identities=34%  Similarity=0.550  Sum_probs=137.7

Q ss_pred             ceeeeeeecccCceeEEEEEcc---CC--ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD---DG--FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~---~g--~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ...+.++||.|-||.||+|+..   .|  -.||||..+....    ....+.|++|..++++++|||||+++|.|.+. .
T Consensus       390 ~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t----~d~tekflqEa~iMrnfdHphIikLIGv~~e~-P  464 (974)
T KOG4257|consen  390 LITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCT----PDDTEKFLQEASIMRNFDHPHIIKLIGVCVEQ-P  464 (974)
T ss_pred             hccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCC----hhhHHHHHHHHHHHHhCCCcchhheeeeeecc-c
Confidence            3456788999999999999863   23  3678887764322    22246799999999999999999999998754 6


Q ss_pred             EEEEEEeccCCCHHHHHHhcC--CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRYH--LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~~--l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      .|||||+++.|.|..+++.++  ++...+..|++||+.+|.|||++++|||||...|||+.....|||+||||++.+...
T Consensus       465 ~WivmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~  544 (974)
T KOG4257|consen  465 MWIVMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDD  544 (974)
T ss_pred             eeEEEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhcccc
Confidence            999999999999999998764  777888999999999999999999999999999999999999999999999977655


Q ss_pred             C-cccccC--CCccccccccc
Q 010676          483 D-VKSCRG--TAFWMAPEVCS  500 (504)
Q Consensus       483 ~-~~s~~G--T~~YmAPEVL~  500 (504)
                      . .+...|  ...|||||-++
T Consensus       545 ~yYkaS~~kLPIKWmaPESIN  565 (974)
T KOG4257|consen  545 AYYKASRGKLPIKWMAPESIN  565 (974)
T ss_pred             chhhccccccceeecCccccc
Confidence            4 233333  44599999765


No 391
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=99.86  E-value=8.6e-22  Score=201.84  Aligned_cols=167  Identities=25%  Similarity=0.338  Sum_probs=138.6

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC--CC----ceeEEeeee
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE--HE----NIVQYYGTD  399 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~--Hp----nIV~l~~~~  399 (504)
                      +..+|.+...||+|+||.|-++++ ..+..||||+++....      ..+..+-|+++|.++.  .|    -+|.+.+||
T Consensus        87 l~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V~k------YreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF  160 (415)
T KOG0671|consen   87 LTNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNVDK------YREAALIEIEVLQKINESDPNGKFRCVQMRDWF  160 (415)
T ss_pred             cccceehhhhhcCCcccceEEEeecCCCceehHHHHHHHHH------HhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh
Confidence            356899999999999999999998 5689999998864322      2234457899999984  23    378889999


Q ss_pred             cCCCeEEEEEEeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC------------
Q 010676          400 KDESKLYIFLELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA------------  464 (504)
Q Consensus       400 ~~~~~lyLVmEy~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~------------  464 (504)
                      ...++.|||+|.+. -++.+++..++   ++..++..+++|++.+++|||+.+|+|.||||+|||+..            
T Consensus       161 dyrghiCivfellG-~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~  239 (415)
T KOG0671|consen  161 DYRGHICIVFELLG-LSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKK  239 (415)
T ss_pred             hccCceEEEEeccC-hhHHHHhccCCccccchHHHHHHHHHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCc
Confidence            99999999999984 48999998754   888999999999999999999999999999999999932            


Q ss_pred             --------CCcEEEEecCcccccccCCcccccCCCcccccccccC
Q 010676          465 --------NGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       465 --------~g~VKL~DFGLA~~~~~~~~~s~~GT~~YmAPEVL~g  501 (504)
                              +-.|+|+|||.|...... ....+.|..|.||||+.|
T Consensus       240 ~~~~r~~ks~~I~vIDFGsAtf~~e~-hs~iVsTRHYRAPEViLg  283 (415)
T KOG0671|consen  240 VCFIRPLKSTAIKVIDFGSATFDHEH-HSTIVSTRHYRAPEVILG  283 (415)
T ss_pred             cceeccCCCcceEEEecCCcceeccC-cceeeeccccCCchheec
Confidence                    235899999998764433 356779999999999976


No 392
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.86  E-value=4e-21  Score=181.40  Aligned_cols=157  Identities=38%  Similarity=0.630  Sum_probs=136.5

Q ss_pred             CceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCCCHHH
Q 010676          341 SFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLN  419 (504)
Q Consensus       341 ~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~ggsL~~  419 (504)
                      +||.||+|... ++..+++|++........    ...+.+|+.+++.++|+||+++++++......+++|||+.+++|..
T Consensus         1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~----~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~   76 (244)
T smart00220        1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKK----RERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFD   76 (244)
T ss_pred             CceEEEEEEECCCCcEEEEEEecccccccH----HHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHH
Confidence            58999999985 589999998864332211    4678899999999999999999999999999999999999999999


Q ss_pred             HHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC-CcccccCCCcccccc
Q 010676          420 LYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN-DVKSCRGTAFWMAPE  497 (504)
Q Consensus       420 ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~-~~~s~~GT~~YmAPE  497 (504)
                      ++.... ++...+..++.+++.+|.|||+.+|+|+||+|.||+++.++.++|+|||++...... ......++..|++||
T Consensus        77 ~~~~~~~~~~~~~~~~~~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~pE  156 (244)
T smart00220       77 LLKKRGRLSEDEARFYARQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEYMAPE  156 (244)
T ss_pred             HHHhccCCCHHHHHHHHHHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCCCCHH
Confidence            987665 889999999999999999999999999999999999999999999999998765543 344556899999999


Q ss_pred             cccC
Q 010676          498 VCSN  501 (504)
Q Consensus       498 VL~g  501 (504)
                      ++.+
T Consensus       157 ~~~~  160 (244)
T smart00220      157 VLLG  160 (244)
T ss_pred             HHcc
Confidence            8864


No 393
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=99.85  E-value=1.9e-22  Score=198.95  Aligned_cols=167  Identities=29%  Similarity=0.434  Sum_probs=135.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhh-CCCCceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSR-FEHENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~-L~HpnIV~l~~~~~~~~~lyL  407 (504)
                      ..+-+..||.|.||+|++-.. ..|+..|||.+.....    ....+++..|.....+ -+.||||++|++...++..||
T Consensus        65 ~Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~----~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWi  140 (361)
T KOG1006|consen   65 NLQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNI----EKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWI  140 (361)
T ss_pred             hHHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccc----hHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceee
Confidence            445567799999999999876 6899999999875433    2334567777766554 469999999999999999999


Q ss_pred             EEEeccCCCHHHHHH------hcCCChHHHHHHHHHHHHHHHHHH-HCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          408 FLELVTKGSLLNLYQ------RYHLRDSQVSAYTRQILLGLKYLH-DQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       408 VmEy~~ggsL~~ll~------~~~l~e~~v~~i~~QIl~gL~yLH-s~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      -||+|.- +|..+++      +..+++.-+-.|...++.||.||- +.+||||||||+|||++..|.|||||||++..+.
T Consensus       141 CMELMd~-SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv  219 (361)
T KOG1006|consen  141 CMELMDI-SLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV  219 (361)
T ss_pred             eHHHHhh-hHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHH
Confidence            9999975 7776653      345888888899999999999997 4689999999999999999999999999987654


Q ss_pred             cCC-cccccCCCcccccccccC
Q 010676          481 LND-VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~~-~~s~~GT~~YmAPEVL~g  501 (504)
                      ... .+.-.|...|||||-+..
T Consensus       220 ~SiAkT~daGCrpYmAPERi~p  241 (361)
T KOG1006|consen  220 DSIAKTVDAGCRPYMAPERIDP  241 (361)
T ss_pred             HHHHhhhccCCccccChhccCC
Confidence            333 233458999999998763


No 394
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.85  E-value=1.3e-21  Score=206.40  Aligned_cols=168  Identities=25%  Similarity=0.378  Sum_probs=146.5

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCC------CceeEEeeeec
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH------ENIVQYYGTDK  400 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~H------pnIV~l~~~~~  400 (504)
                      -++|.+....|+|-|++|..|.+ ..|..||||++...      ....+.-+.|+.+|++|+.      -|+++|+-+|.
T Consensus       431 D~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnN------E~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~  504 (752)
T KOG0670|consen  431 DSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNN------EVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFK  504 (752)
T ss_pred             cceeEEEeccccceeeeeeeccccCCCCeeEEEEeecc------hHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhh
Confidence            35789999999999999999998 56789999999632      2333445689999999962      48999999999


Q ss_pred             CCCeEEEEEEeccCCCHHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC-CcEEEEecCc
Q 010676          401 DESKLYIFLELVTKGSLLNLYQRYH----LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGL  475 (504)
Q Consensus       401 ~~~~lyLVmEy~~ggsL~~ll~~~~----l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~-g~VKL~DFGL  475 (504)
                      ..+++|||+|.+.. +|..++++++    |....+..|+.|++.||.+|-.+||+|+||||+|||+++. ..+||||||.
T Consensus       505 hknHLClVFE~Lsl-NLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGS  583 (752)
T KOG0670|consen  505 HKNHLCLVFEPLSL-NLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGS  583 (752)
T ss_pred             hcceeEEEehhhhc-hHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcc
Confidence            99999999998864 8999998765    7778999999999999999999999999999999999865 4689999999


Q ss_pred             ccccccCCcccccCCCcccccccccCC
Q 010676          476 AKATKLNDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       476 A~~~~~~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      |.....+..+.+.-+..|.|||++.|.
T Consensus       584 A~~~~eneitPYLVSRFYRaPEIiLG~  610 (752)
T KOG0670|consen  584 ASFASENEITPYLVSRFYRAPEIILGL  610 (752)
T ss_pred             ccccccccccHHHHHHhccCcceeecC
Confidence            998888888888889999999999875


No 395
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=99.85  E-value=2.1e-21  Score=212.18  Aligned_cols=167  Identities=28%  Similarity=0.460  Sum_probs=142.0

Q ss_pred             ceeeeeeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKL  405 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~l  405 (504)
                      ...|.++||.|.||.||+|..+    ....||||.++.-    ..+.....|+.|..|+-+++||||++|.+.......+
T Consensus       630 ~i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~G----ytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~Pv  705 (996)
T KOG0196|consen  630 CVKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAG----YTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPV  705 (996)
T ss_pred             heEEEEEEecccccceecccccCCCCcceeEEEeeeccC----ccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCcee
Confidence            4678899999999999999873    4568999987642    2233346799999999999999999999999999999


Q ss_pred             EEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          406 YIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                      .||+|||++|+|+.+++.+  .|...++..+++.|+.|++||-+.|+|||||...||||+.+-.+|++||||++.+..+.
T Consensus       706 MIiTEyMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~  785 (996)
T KOG0196|consen  706 MIITEYMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDP  785 (996)
T ss_pred             EEEhhhhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCC
Confidence            9999999999999999765  48888899999999999999999999999999999999999999999999999765443


Q ss_pred             ---cccccC--CCccccccccc
Q 010676          484 ---VKSCRG--TAFWMAPEVCS  500 (504)
Q Consensus       484 ---~~s~~G--T~~YmAPEVL~  500 (504)
                         .++.-|  ...|.|||.+.
T Consensus       786 ~~~ytt~GGKIPiRWTAPEAIa  807 (996)
T KOG0196|consen  786 EAAYTTLGGKIPIRWTAPEAIA  807 (996)
T ss_pred             CccccccCCccceeecChhHhh
Confidence               122222  35699999875


No 396
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.85  E-value=1.9e-21  Score=210.44  Aligned_cols=170  Identities=28%  Similarity=0.417  Sum_probs=142.5

Q ss_pred             cccceeeeeeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      -.+...+.++||+|+||+|++|.+.    +...||||++.......    ....|.+|+.++.+|+|+|+++||+...+ 
T Consensus       108 pee~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~----~mddflrEas~M~~L~H~hliRLyGvVl~-  182 (1039)
T KOG0199|consen  108 PEEQIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNA----IMDDFLREASHMLKLQHPHLIRLYGVVLD-  182 (1039)
T ss_pred             cHHHHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccch----hHHHHHHHHHHHHhccCcceeEEeeeecc-
Confidence            3456777899999999999999983    34588999886543322    45679999999999999999999999877 


Q ss_pred             CeEEEEEEeccCCCHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ..+.||||+++.|+|.+.+...   .|-...+..|+.||+.|+.||..+++|||||-..|||+.....|||+||||.+.+
T Consensus       183 qp~mMV~ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaL  262 (1039)
T KOG0199|consen  183 QPAMMVFELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRAL  262 (1039)
T ss_pred             chhhHHhhhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceecc
Confidence            6789999999999999988762   3667788899999999999999999999999999999999999999999999987


Q ss_pred             ccCCcccc-----cCCCcccccccccC
Q 010676          480 KLNDVKSC-----RGTAFWMAPEVCSN  501 (504)
Q Consensus       480 ~~~~~~s~-----~GT~~YmAPEVL~g  501 (504)
                      ..+.-...     .--..|+|||-|..
T Consensus       263 g~ned~Yvm~p~rkvPfAWCaPEsLrh  289 (1039)
T KOG0199|consen  263 GENEDMYVMAPQRKVPFAWCAPESLRH  289 (1039)
T ss_pred             CCCCcceEecCCCcCcccccCHhHhcc
Confidence            66543222     23456999998874


No 397
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.85  E-value=9.3e-22  Score=190.70  Aligned_cols=163  Identities=24%  Similarity=0.435  Sum_probs=138.7

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCC--C
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDE--S  403 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~--~  403 (504)
                      .++|++.+.+|+|-|+.||.|+. .+...++||+++..+        .+.+.+|+.+|..|. ||||+++++...+.  .
T Consensus        37 ~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVk--------kkKIkREikIL~nL~gg~NIi~L~DiV~Dp~Sk  108 (338)
T KOG0668|consen   37 QDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVK--------KKKIKREIKILQNLRGGPNIIKLLDIVKDPESK  108 (338)
T ss_pred             cchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHH--------HHHHHHHHHHHHhccCCCCeeehhhhhcCcccc
Confidence            56899999999999999999997 678889999886432        256789999999998 99999999987665  3


Q ss_pred             eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-CCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-NGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-~g~VKL~DFGLA~~~~~~  482 (504)
                      ..-+|+||+.+.++..++..  ++...+..|+.|++.||.|+|+.||+|||+||.|+||+. ...++|+|+|||.+...+
T Consensus       109 tpaLiFE~v~n~Dfk~ly~t--l~d~dIryY~~elLkALdyCHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~  186 (338)
T KOG0668|consen  109 TPSLIFEYVNNTDFKQLYPT--LTDYDIRYYIYELLKALDYCHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPG  186 (338)
T ss_pred             CchhHhhhhccccHHHHhhh--hchhhHHHHHHHHHHHHhHHHhcCcccccCCcceeeechhhceeeeeecchHhhcCCC
Confidence            47899999999999888764  777889999999999999999999999999999999985 457999999999886655


Q ss_pred             C-cccccCCCccccccccc
Q 010676          483 D-VKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       483 ~-~~s~~GT~~YmAPEVL~  500 (504)
                      . ..-.+.+.+|--||+|-
T Consensus       187 ~eYnVRVASRyfKGPELLV  205 (338)
T KOG0668|consen  187 KEYNVRVASRYFKGPELLV  205 (338)
T ss_pred             ceeeeeeehhhcCCchhee
Confidence            4 33345677888899874


No 398
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.83  E-value=9.8e-21  Score=204.16  Aligned_cols=166  Identities=29%  Similarity=0.378  Sum_probs=138.8

Q ss_pred             ccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEeeeecCCC
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYGTDKDES  403 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~~~~~~~  403 (504)
                      .+...|.+...||.|+|+.|-.+.+ .++..+++|++.....         ...+|+.++... +||||+++.+.+.+..
T Consensus       319 ~~~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~~---------~~~~e~~~~~~~~~h~niv~~~~v~~~~~  389 (612)
T KOG0603|consen  319 PFTESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRAD---------DNQDEIPISLLVRDHPNIVKSHDVYEDGK  389 (612)
T ss_pred             CcchhhccccccCCCCccceeeeeccccccchhheecccccc---------ccccccchhhhhcCCCcceeecceecCCc
Confidence            3566788888899999999999887 6888999998865311         123566555444 6999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEE-cCCCcEEEEecCcccccccC
Q 010676          404 KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILV-DANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILL-d~~g~VKL~DFGLA~~~~~~  482 (504)
                      .+|+|||++.|+.|.+-+.........+..|++||+.++.|||.+|+|||||||+|||+ +..|+++|+|||+++.....
T Consensus       390 ~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~~~lv~Av~~LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~  469 (612)
T KOG0603|consen  390 EIYLVMELLDGGELLRRIRSKPEFCSEASQWAAELVSAVDYLHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS  469 (612)
T ss_pred             eeeeeehhccccHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchh
Confidence            99999999999988877666555547888899999999999999999999999999999 68999999999999876655


Q ss_pred             CcccccCCCcccccccccC
Q 010676          483 DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g  501 (504)
                       ....+-|..|.|||++..
T Consensus       470 -~~tp~~t~~y~APEvl~~  487 (612)
T KOG0603|consen  470 -CDTPALTLQYVAPEVLAI  487 (612)
T ss_pred             -hcccchhhcccChhhhcc
Confidence             334457899999999874


No 399
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.83  E-value=5.7e-21  Score=197.71  Aligned_cols=145  Identities=29%  Similarity=0.461  Sum_probs=127.9

Q ss_pred             ccccccceeeeeeecccCceeEEEEEcc----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeee
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGISD----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGT  398 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~~----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~  398 (504)
                      ++.+...|.+.++||.|+|++||++++.    ...+||+|.+.....       ..++.+|+++|..+. +.||+++.++
T Consensus        31 ~p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~-------p~ri~~El~~L~~~gG~~ni~~~~~~  103 (418)
T KOG1167|consen   31 IPFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSS-------PSRILNELEMLYRLGGSDNIIKLNGC  103 (418)
T ss_pred             hhhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccC-------chHHHHHHHHHHHhccchhhhcchhh
Confidence            4456678999999999999999999873    578999998865433       245789999999886 9999999999


Q ss_pred             ecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEc-CCCcEEEEecCccc
Q 010676          399 DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVD-ANGSVKLADFGLAK  477 (504)
Q Consensus       399 ~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd-~~g~VKL~DFGLA~  477 (504)
                      +..++++.+||||++.....+++..  ++...+..|++.++.||.|+|.+|||||||||.|||.+ ..+...|+|||||.
T Consensus       104 ~rnnd~v~ivlp~~~H~~f~~l~~~--l~~~~i~~Yl~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~  181 (418)
T KOG1167|consen  104 FRNNDQVAIVLPYFEHDRFRDLYRS--LSLAEIRWYLRNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ  181 (418)
T ss_pred             hccCCeeEEEecccCccCHHHHHhc--CCHHHHHHHHHHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHH
Confidence            9999999999999999999999876  55678999999999999999999999999999999998 45789999999996


No 400
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.83  E-value=1.9e-19  Score=171.86  Aligned_cols=167  Identities=38%  Similarity=0.556  Sum_probs=142.6

Q ss_pred             eeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCC-ceeEEeeeecCCCeEEEEE
Q 010676          331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE-NIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp-nIV~l~~~~~~~~~lyLVm  409 (504)
                      |.+.+.||.|+||.||++.+.  ..+++|.+........  .....+.+|+.++..+.|+ +|+++++.+......++++
T Consensus         2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~--~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~   77 (384)
T COG0515           2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKS--KEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVM   77 (384)
T ss_pred             ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccch--hHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEE
Confidence            778899999999999999887  7788888764333221  2356788999999999988 7999999998777889999


Q ss_pred             EeccCCCHHHHHHhc----CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-cEEEEecCcccccccCC-
Q 010676          410 ELVTKGSLLNLYQRY----HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-SVKLADFGLAKATKLND-  483 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~----~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-~VKL~DFGLA~~~~~~~-  483 (504)
                      +++.+++|.+++...    .+.......++.|++.++.|+|..+++||||||+||+++..+ .++++|||+++...... 
T Consensus        78 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~  157 (384)
T COG0515          78 EYVDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGS  157 (384)
T ss_pred             ecCCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCc
Confidence            999999999877765    588999999999999999999999999999999999999988 79999999987544332 


Q ss_pred             -------cccccCCCcccccccccC
Q 010676          484 -------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       484 -------~~s~~GT~~YmAPEVL~g  501 (504)
                             .....||..|+|||++.+
T Consensus       158 ~~~~~~~~~~~~~t~~~~~pe~~~~  182 (384)
T COG0515         158 TSSIPALPSTSVGTPGYMAPEVLLG  182 (384)
T ss_pred             cccccccccccccccccCCHHHhcC
Confidence                   355679999999999876


No 401
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.82  E-value=6.3e-21  Score=191.98  Aligned_cols=168  Identities=26%  Similarity=0.387  Sum_probs=140.8

Q ss_pred             ccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC----
Q 010676          328 ITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE----  402 (504)
Q Consensus       328 ~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~----  402 (504)
                      ..+|.-++.+|.|.- .|..|.+ -.+..||+|.+....   ......++..+|+.++..++|+||++++.+|.-.    
T Consensus        16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf---~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~   91 (369)
T KOG0665|consen   16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPF---QNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLE   91 (369)
T ss_pred             eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCcc---ccCccchhhhhhhhhhhhhcccceeeeeeccCccccHH
Confidence            347888899999988 7777776 578899999775432   2233345677999999999999999999988544    


Q ss_pred             --CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          403 --SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       403 --~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                        ..+|+||||+.. +|...+. ..++-.++..++.|++.|++|||+.||+||||||+||++..++.+||.|||+|+...
T Consensus        92 ~~~e~y~v~e~m~~-nl~~vi~-~elDH~tis~i~yq~~~~ik~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~  169 (369)
T KOG0665|consen   92 EFQEVYLVMELMDA-NLCQVIL-MELDHETISYILYQMLCGIKHLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTED  169 (369)
T ss_pred             HHHhHHHHHHhhhh-HHHHHHH-HhcchHHHHHHHHHHHHHHHHHHhcceeecccCcccceecchhheeeccchhhcccC
Confidence              348999999976 7877766 567888999999999999999999999999999999999999999999999998766


Q ss_pred             cC-CcccccCCCcccccccccC
Q 010676          481 LN-DVKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~-~~~s~~GT~~YmAPEVL~g  501 (504)
                      .. ..+.++.|.+|.|||++.|
T Consensus       170 ~~~~mtpyVvtRyyrapevil~  191 (369)
T KOG0665|consen  170 TDFMMTPYVVTRYYRAPEVILG  191 (369)
T ss_pred             cccccCchhheeeccCchheec
Confidence            66 4667889999999999865


No 402
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.82  E-value=1.5e-20  Score=207.03  Aligned_cols=162  Identities=35%  Similarity=0.544  Sum_probs=130.5

Q ss_pred             eeeeeeecccCcee-EEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEEE
Q 010676          331 WQKGDLLGRGSFGS-VYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       331 y~i~k~LG~G~FG~-VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyLV  408 (504)
                      |.-.+++|.|+-|+ ||+|... |+.||||.+..        .......+||.+|+.-+ |||||++|+.-.+...+||.
T Consensus       511 ~~~~eilG~Gs~Gt~Vf~G~ye-~R~VAVKrll~--------e~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIa  581 (903)
T KOG1027|consen  511 FSPKEILGYGSNGTVVFRGVYE-GREVAVKRLLE--------EFFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIA  581 (903)
T ss_pred             eccHHHcccCCCCcEEEEEeeC-CceehHHHHhh--------HhHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEE
Confidence            44457799999875 7899875 67999996642        22344568999999885 99999999999999999999


Q ss_pred             EEeccCCCHHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC---CC--cEEEEecCcccc
Q 010676          409 LELVTKGSLLNLYQRYH-----LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA---NG--SVKLADFGLAKA  478 (504)
Q Consensus       409 mEy~~ggsL~~ll~~~~-----l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~---~g--~VKL~DFGLA~~  478 (504)
                      +|+|.. +|.+++....     ........++.|++.||+|||+.+||||||||.||||..   ++  .++|+|||+++.
T Consensus       582 lELC~~-sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKk  660 (903)
T KOG1027|consen  582 LELCAC-SLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKK  660 (903)
T ss_pred             ehHhhh-hHHHHHhccccchhhcccccHHHHHHHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccc
Confidence            999976 8999987631     111345678899999999999999999999999999975   34  689999999998


Q ss_pred             cccCC-----cccccCCCcccccccccCC
Q 010676          479 TKLND-----VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       479 ~~~~~-----~~s~~GT~~YmAPEVL~g~  502 (504)
                      +..+.     .....||-+|+|||+|.+.
T Consensus       661 l~~~~sS~~r~s~~sGt~GW~APE~L~~~  689 (903)
T KOG1027|consen  661 LAGGKSSFSRLSGGSGTSGWQAPEQLRED  689 (903)
T ss_pred             cCCCcchhhcccCCCCcccccCHHHHhcc
Confidence            76543     2345699999999998753


No 403
>PRK10345 hypothetical protein; Provisional
Probab=99.82  E-value=1.1e-19  Score=176.74  Aligned_cols=136  Identities=23%  Similarity=0.365  Sum_probs=105.6

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-----CCCceeEEeeeecCCC---eE
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-----EHENIVQYYGTDKDES---KL  405 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-----~HpnIV~l~~~~~~~~---~l  405 (504)
                      .++||+|+||.||. .-.++.. +||++......     ....+.+|+.+++.+     .||||+++++++.++.   .+
T Consensus         7 ~~~LG~G~~~~Vy~-hp~~~~k-~IKv~~~~~~~-----~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v   79 (210)
T PRK10345          7 QSPLGTGRHRKCYA-HPEDAQR-CIKIVYHRGDG-----GDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYV   79 (210)
T ss_pred             cceecCCCceEEEE-CCCCcCe-EEEEEeccccc-----hHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEE
Confidence            46799999999996 2234433 68877543221     235688999999999     5799999999998874   43


Q ss_pred             E-EEEEe--ccCCCHHHHHHhcCCChHHHHHHHHHHHHHH-HHHHHCCceecCCCCCcEEEcCC----CcEEEEe-cCcc
Q 010676          406 Y-IFLEL--VTKGSLLNLYQRYHLRDSQVSAYTRQILLGL-KYLHDQDVVHRDIKCANILVDAN----GSVKLAD-FGLA  476 (504)
Q Consensus       406 y-LVmEy--~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL-~yLHs~gIIHRDLKP~NILLd~~----g~VKL~D-FGLA  476 (504)
                      | +||||  +.+++|.+++++..+.+.  ..++.|++.++ +|||+++|+||||||+|||++.+    +.++|+| ||..
T Consensus        80 ~~~I~e~~G~~~~tL~~~l~~~~~~e~--~~~~~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~~  157 (210)
T PRK10345         80 YDVIADFDGKPSITLTEFAEQCRYEED--VAQLRQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGES  157 (210)
T ss_pred             EEEEecCCCCcchhHHHHHHcccccHh--HHHHHHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCCc
Confidence            4 78999  557999999987766655  46688888888 89999999999999999999743    3799999 5544


Q ss_pred             cc
Q 010676          477 KA  478 (504)
Q Consensus       477 ~~  478 (504)
                      ..
T Consensus       158 ~~  159 (210)
T PRK10345        158 TF  159 (210)
T ss_pred             ce
Confidence            33


No 404
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=99.81  E-value=1e-19  Score=202.07  Aligned_cols=174  Identities=30%  Similarity=0.474  Sum_probs=143.2

Q ss_pred             ccccccceeeeeeecccCceeEEEEEcc--------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeE
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGISD--------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQ  394 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~~--------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~  394 (504)
                      +....++..+.+.||.|.||.|++|...        ....||||.++....    ....+.+..|+++++.+. |+||+.
T Consensus       291 ~e~~~~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~----~~~~~~~~~El~~m~~~g~H~niv~  366 (609)
T KOG0200|consen  291 WEIPRENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENAS----SSEKKDLMSELNVLKELGKHPNIVN  366 (609)
T ss_pred             eeechhhccccceeecccccceEeEEEeecccccccceEEEEEEecccccC----cHHHHHHHHHHHHHHHhcCCcchhh
Confidence            3333445567779999999999999741        256788997653222    234567889999999885 999999


Q ss_pred             EeeeecCCCeEEEEEEeccCCCHHHHHHhcC-----------------CChHHHHHHHHHHHHHHHHHHHCCceecCCCC
Q 010676          395 YYGTDKDESKLYIFLELVTKGSLLNLYQRYH-----------------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKC  457 (504)
Q Consensus       395 l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~-----------------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP  457 (504)
                      +++++.....+++|+||+..|+|..+++..+                 +....+..+++||+.|++||++.++|||||-.
T Consensus       367 llG~~t~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~~~~~vHRDLAa  446 (609)
T KOG0200|consen  367 LLGACTQDGPLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLASVPCVHRDLAA  446 (609)
T ss_pred             heeeeccCCceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHhhCCccchhhhh
Confidence            9999999999999999999999999998877                 88899999999999999999999999999999


Q ss_pred             CcEEEcCCCcEEEEecCcccccccCCccc---ccCCC--cccccccccC
Q 010676          458 ANILVDANGSVKLADFGLAKATKLNDVKS---CRGTA--FWMAPEVCSN  501 (504)
Q Consensus       458 ~NILLd~~g~VKL~DFGLA~~~~~~~~~s---~~GT~--~YmAPEVL~g  501 (504)
                      .||||..+..+||+|||||+.........   ..||.  .|||||.+..
T Consensus       447 RNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~  495 (609)
T KOG0200|consen  447 RNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFD  495 (609)
T ss_pred             hhEEecCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhcc
Confidence            99999999999999999998655443222   22333  3999998876


No 405
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.81  E-value=1e-19  Score=184.20  Aligned_cols=159  Identities=27%  Similarity=0.412  Sum_probs=134.5

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYI  407 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyL  407 (504)
                      .|+++++||+|+||++++|++ -++..||||.-....       ...++..|.+..+.|. .++|..+|.+..+..+-.|
T Consensus        29 hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS-------~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiL  101 (449)
T KOG1165|consen   29 HYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS-------EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNIL  101 (449)
T ss_pred             cceeccccccCcceeeecccccccCceEEEEeccccC-------CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhh
Confidence            699999999999999999998 789999999654322       1245677888887775 7999999999999988899


Q ss_pred             EEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC-----cEEEEecCcccccc
Q 010676          408 FLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG-----SVKLADFGLAKATK  480 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g-----~VKL~DFGLA~~~~  480 (504)
                      |||++ |-+|.+++.-+  .|+.+++..++.|++.-++|+|++.+|+|||||+|+||..-+     .+.|+|||+|+.+.
T Consensus       102 VidLL-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr  180 (449)
T KOG1165|consen  102 VIDLL-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR  180 (449)
T ss_pred             hhhhh-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence            99998 55999998765  499999999999999999999999999999999999997543     58999999998764


Q ss_pred             cCC---------cccccCCCccccc
Q 010676          481 LND---------VKSCRGTAFWMAP  496 (504)
Q Consensus       481 ~~~---------~~s~~GT~~YmAP  496 (504)
                      ...         .++..||..||+-
T Consensus       181 Dp~TkqHIPYrE~KSLsGTARYMSI  205 (449)
T KOG1165|consen  181 DPKTKQHIPYREHKSLSGTARYMSI  205 (449)
T ss_pred             CccccccCccccccccccceeeeEe
Confidence            332         3456799999974


No 406
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.81  E-value=1.7e-20  Score=185.62  Aligned_cols=167  Identities=23%  Similarity=0.376  Sum_probs=137.8

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEee-eecCCC
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYG-TDKDES  403 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~-~~~~~~  403 (504)
                      +.+.|.|.+.||+|.||.+-++.+ .+...+++|.+..      ....+..|.+|+..--.|. |.||+.-|+ .|++.+
T Consensus        22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~------p~tt~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d   95 (378)
T KOG1345|consen   22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPR------PQTTQADFVREFHYSFFLSPHQHIIDTYEVAFQTSD   95 (378)
T ss_pred             hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCc------chhhHHHHHHHhccceeeccchhhhHHHHHHhhcCc
Confidence            456899999999999999999998 5778899997753      2233567888887665554 899998876 588889


Q ss_pred             eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEc--CCCcEEEEecCccccccc
Q 010676          404 KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVD--ANGSVKLADFGLAKATKL  481 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd--~~g~VKL~DFGLA~~~~~  481 (504)
                      .+++++||++.|+|..-+...++.+...+.++.|+++||.|||+++|||||||.+||||-  ...+|||||||+.+....
T Consensus        96 ~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~~ql~SAi~fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~  175 (378)
T KOG1345|consen   96 AYVFVQEFAPRGDLRSNVEAAGIGEANTKKVFAQLLSAIEFMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGT  175 (378)
T ss_pred             eEEEeeccCccchhhhhcCcccccHHHHHHHHHHHHHHHHHhhccchhhcccccceEEEecCCccEEEeeecccccccCc
Confidence            999999999999999999889999999999999999999999999999999999999994  345899999998764332


Q ss_pred             CCcccccCCCccccccccc
Q 010676          482 NDVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       482 ~~~~s~~GT~~YmAPEVL~  500 (504)
                      . ......+..|.+||++.
T Consensus       176 t-V~~~~~~~~y~~pe~~~  193 (378)
T KOG1345|consen  176 T-VKYLEYVNNYHAPELCD  193 (378)
T ss_pred             e-ehhhhhhcccCCcHHHh
Confidence            1 22333567799999765


No 407
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.80  E-value=2e-18  Score=181.56  Aligned_cols=130  Identities=28%  Similarity=0.398  Sum_probs=109.0

Q ss_pred             cceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-----C---CceeEEeeee
Q 010676          329 TYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-----H---ENIVQYYGTD  399 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-----H---pnIV~l~~~~  399 (504)
                      .+|.+.++||.|-|++||+|++ .+.++||+|+++-      .+...+..+.||++|++++     |   .+||+|++.|
T Consensus        78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKS------AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F  151 (590)
T KOG1290|consen   78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKS------AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF  151 (590)
T ss_pred             ceEEEEEeccccccceeEEEeeccCCeEEEEEEEeh------hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc
Confidence            6899999999999999999999 6788999999873      2333455678999999884     2   3699999998


Q ss_pred             cC----CCeEEEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCC
Q 010676          400 KD----ESKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDAN  465 (504)
Q Consensus       400 ~~----~~~lyLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~  465 (504)
                      ..    ..++|||+|++.. +|..++..   .+++...++.|++|||.||.|||. .||||.||||+|||+..+
T Consensus       152 khsGpNG~HVCMVfEvLGd-nLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ecgIIHTDlKPENvLl~~~  224 (590)
T KOG1290|consen  152 KHSGPNGQHVCMVFEVLGD-NLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHRECGIIHTDLKPENVLLCST  224 (590)
T ss_pred             eecCCCCcEEEEEehhhhh-HHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhcCccccCCCcceeeeecc
Confidence            64    5679999999954 66666654   359999999999999999999995 699999999999999544


No 408
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.80  E-value=8.2e-19  Score=179.87  Aligned_cols=166  Identities=28%  Similarity=0.336  Sum_probs=130.7

Q ss_pred             ceeeeeeecccCceeEEEEEccC--CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC----CCceeEEeeee-cCC
Q 010676          330 YWQKGDLLGRGSFGSVYEGISDD--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE----HENIVQYYGTD-KDE  402 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~~--g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~----HpnIV~l~~~~-~~~  402 (504)
                      .|.+.+.||+|+||.||++.+..  ...+|+|..........     ..+..|+.++..+.    ..++..+++.+ ...
T Consensus        19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~-----~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~   93 (322)
T KOG1164|consen   19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKP-----SVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTE   93 (322)
T ss_pred             ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCC-----ccchhHHHHHHHHhhhcCCCCCCEEEEeccCCC
Confidence            89999999999999999999854  35888887764322211     13556777777776    36899999999 578


Q ss_pred             CeEEEEEEeccCCCHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC-----CcEEEEecC
Q 010676          403 SKLYIFLELVTKGSLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-----GSVKLADFG  474 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~-----g~VKL~DFG  474 (504)
                      ..-||||+++ |-+|.++...   ..++..++..++.|++.+|++||+.|+|||||||.|+++...     ..+.|+|||
T Consensus        94 ~~~~iVM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfG  172 (322)
T KOG1164|consen   94 DFNFIVMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFG  172 (322)
T ss_pred             ceeEEEEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecC
Confidence            8899999988 5689998754   358999999999999999999999999999999999999865     369999999


Q ss_pred             cccccc--cCC----------cccccCCCcccccccccC
Q 010676          475 LAKATK--LND----------VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       475 LA~~~~--~~~----------~~s~~GT~~YmAPEVL~g  501 (504)
                      +++...  ...          .....||..|+++.+-.+
T Consensus       173 lar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~  211 (322)
T KOG1164|consen  173 LARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLG  211 (322)
T ss_pred             CCccccccCCCCcccccCCCCccCCCCccccccHHHhCC
Confidence            998321  111          122449999999875443


No 409
>smart00090 RIO RIO-like kinase.
Probab=99.79  E-value=5.1e-19  Score=174.86  Aligned_cols=146  Identities=19%  Similarity=0.173  Sum_probs=113.7

Q ss_pred             ceeeeeeecccCceeEEEEE--ccCCceEEEEEEeccccch-------------------hhHHHHHHHHHHHHHHhhCC
Q 010676          330 YWQKGDLLGRGSFGSVYEGI--SDDGFFFAVKEVSLLDQGS-------------------QAKQSISQLEQEIALLSRFE  388 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~--~~~g~~vAVK~v~~~~~~~-------------------~~~~~~~~~~~Ei~iL~~L~  388 (504)
                      -|.+.+.||+|+||.||+|.  ..+|..||+|++.......                   ........+.+|+.++.++.
T Consensus        29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~  108 (237)
T smart00090       29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY  108 (237)
T ss_pred             hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence            47888999999999999998  4789999999987532110                   00111234678999999997


Q ss_pred             CC--ceeEEeeeecCCCeEEEEEEeccCCCHHHHH-HhcCCChHHHHHHHHHHHHHHHHHHHCC-ceecCCCCCcEEEcC
Q 010676          389 HE--NIVQYYGTDKDESKLYIFLELVTKGSLLNLY-QRYHLRDSQVSAYTRQILLGLKYLHDQD-VVHRDIKCANILVDA  464 (504)
Q Consensus       389 Hp--nIV~l~~~~~~~~~lyLVmEy~~ggsL~~ll-~~~~l~e~~v~~i~~QIl~gL~yLHs~g-IIHRDLKP~NILLd~  464 (504)
                      +.  .+.+++.+    ...|+||||+.|.+|..++ ....+....+..++.||+.+|.+||.+| |+||||||+|||++ 
T Consensus       109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~g~iiH~Dikp~NIli~-  183 (237)
T smart00090      109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELYDDILEEMRKLYKEGELVHGDLSEYNILVH-  183 (237)
T ss_pred             hcCCCCCeeeEe----cCceEEEEEecCCcccccccccCCcchHHHHHHHHHHHHHHHHHHhcCCEEeCCCChhhEEEE-
Confidence            53  34455543    2358999999998887654 3444666677899999999999999999 99999999999999 


Q ss_pred             CCcEEEEecCcccccc
Q 010676          465 NGSVKLADFGLAKATK  480 (504)
Q Consensus       465 ~g~VKL~DFGLA~~~~  480 (504)
                      ++.++|+|||++....
T Consensus       184 ~~~i~LiDFg~a~~~~  199 (237)
T smart00090      184 DGKVVIIDVSQSVELD  199 (237)
T ss_pred             CCCEEEEEChhhhccC
Confidence            8899999999987544


No 410
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.79  E-value=6.7e-19  Score=172.05  Aligned_cols=162  Identities=27%  Similarity=0.331  Sum_probs=132.8

Q ss_pred             cccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCe
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESK  404 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~  404 (504)
                      +.+.|.+++.||.|+||.+|+|+. .+|..||||.-.....       ..++..|..+...|+ ...|..+..++.+..+
T Consensus        13 v~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~-------hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~y   85 (341)
T KOG1163|consen   13 VGGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK-------HPQLLYESKVYRILQGGVGIPHIRHYGTEKDY   85 (341)
T ss_pred             eccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC-------CcchhHHHHHHHHhccCCCCchhhhhcccccc
Confidence            457899999999999999999998 7899999997643222       134667888888887 4688888889999999


Q ss_pred             EEEEEEeccCCCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC---CcEEEEecCccccc
Q 010676          405 LYIFLELVTKGSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN---GSVKLADFGLAKAT  479 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~---g~VKL~DFGLA~~~  479 (504)
                      -.+||+++ |-+|.++++-  ..++..+++.++-|++.-|+|+|.+++|||||||+|+|..-+   ..+.|+||||++.+
T Consensus        86 nvlVMdLL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky  164 (341)
T KOG1163|consen   86 NVLVMDLL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKY  164 (341)
T ss_pred             ceeeeecc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhh
Confidence            99999998 4589988764  458889999999999999999999999999999999999643   56999999999864


Q ss_pred             ccCC---------cccccCCCccccc
Q 010676          480 KLND---------VKSCRGTAFWMAP  496 (504)
Q Consensus       480 ~~~~---------~~s~~GT~~YmAP  496 (504)
                      ....         -....||..|.+-
T Consensus       165 ~d~~t~~HIpyre~r~ltGTaRYASi  190 (341)
T KOG1163|consen  165 RDIRTRQHIPYREDRNLTGTARYASI  190 (341)
T ss_pred             ccccccccCccccCCccceeeeehhh
Confidence            3221         2344688888763


No 411
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.79  E-value=1e-18  Score=166.53  Aligned_cols=139  Identities=21%  Similarity=0.260  Sum_probs=113.9

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccc---hhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEe
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQG---SQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLEL  411 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~---~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy  411 (504)
                      +.||+|++|.||+|.. .|..+++|........   .........+.+|+.++..+.|++|+....++......+++|||
T Consensus         2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~   80 (211)
T PRK14879          2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY   80 (211)
T ss_pred             cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence            5799999999999987 6678889975432211   11122335678899999999999887776666667788999999


Q ss_pred             ccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          412 VTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       412 ~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      ++|++|.+++.....   ....++.+++.+|.+||..|++|+|++|.|||++ ++.++|+|||++..
T Consensus        81 ~~G~~L~~~~~~~~~---~~~~i~~~i~~~l~~lH~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~  143 (211)
T PRK14879         81 IEGEPLKDLINSNGM---EELELSREIGRLVGKLHSAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF  143 (211)
T ss_pred             eCCcCHHHHHHhccH---HHHHHHHHHHHHHHHHHhCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence            999999998865432   7788999999999999999999999999999998 88999999999875


No 412
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.79  E-value=1.2e-18  Score=169.62  Aligned_cols=137  Identities=20%  Similarity=0.148  Sum_probs=106.7

Q ss_pred             eeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEEEEE
Q 010676          332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       332 ~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      .+...|++|+||+||++.. .+..++.+.+........ ......+.+|+++|++|. |++|++++++    +..|++|+
T Consensus         5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~-~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvme   78 (218)
T PRK12274          5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLR-GVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRS   78 (218)
T ss_pred             ccceeecCCCcceEEEeec-CCceeeecccccchhhhh-hHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEe
Confidence            3567899999999998766 677777665543222111 111225789999999996 5889999886    45799999


Q ss_pred             eccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCC-CCCcEEEcCCCcEEEEecCcccccc
Q 010676          411 LVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDI-KCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       411 y~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDL-KP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      |+.|.+|...+...      ...++.|++.+|.+||.+||+|||| ||.|||++.+|.++|+|||+|....
T Consensus        79 yI~G~~L~~~~~~~------~~~~~~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~  143 (218)
T PRK12274         79 YLAGAAMYQRPPRG------DLAYFRAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGN  143 (218)
T ss_pred             eecCccHHhhhhhh------hHHHHHHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecC
Confidence            99999987544221      2457889999999999999999999 7999999999999999999998544


No 413
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=99.78  E-value=1.1e-19  Score=199.50  Aligned_cols=167  Identities=29%  Similarity=0.483  Sum_probs=137.3

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCC----ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDG----FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g----~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ..+..++||+|.||+||+|.+ ..|    ..||+|++.....    .+.-.++..|..++..++|||+++|++++.... 
T Consensus       697 elkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~----~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-  771 (1177)
T KOG1025|consen  697 ELKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTS----PKASIELLDEALRMASLDHPNLLRLLGVCMLST-  771 (1177)
T ss_pred             hhhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCC----chhhHHHHHHHHHHhcCCCchHHHHhhhcccch-
Confidence            456678999999999999987 333    4778887653222    233467889999999999999999999998765 


Q ss_pred             EEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccC
Q 010676          405 LYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLN  482 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~  482 (504)
                      +.||++|+++|.|.++++..  .+.....+.|..||+.|+.|||++.++||||-..||||..-..|||.|||+++.....
T Consensus       772 ~qlvtq~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d  851 (1177)
T KOG1025|consen  772 LQLVTQLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPD  851 (1177)
T ss_pred             HHHHHHhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcc
Confidence            88999999999999998754  4888899999999999999999999999999999999999999999999999987655


Q ss_pred             Cccc----ccCCCcccccccccC
Q 010676          483 DVKS----CRGTAFWMAPEVCSN  501 (504)
Q Consensus       483 ~~~s----~~GT~~YmAPEVL~g  501 (504)
                      ....    ..-.+.|||-|.+..
T Consensus       852 ~~ey~~~~gK~pikwmale~i~~  874 (1177)
T KOG1025|consen  852 EKEYSAPGGKVPIKWMALESIRI  874 (1177)
T ss_pred             cccccccccccCcHHHHHHHhhc
Confidence            4221    123456888887654


No 414
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.78  E-value=2.2e-18  Score=162.99  Aligned_cols=136  Identities=24%  Similarity=0.281  Sum_probs=108.0

Q ss_pred             eecccCceeEEEEEccCCceEEEEEEeccccc---hhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEec
Q 010676          336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQG---SQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       336 ~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~---~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      +||+|+||.||+|.. ++..+++|........   ........++.+|+.++..+.|+++.....++...+..++||||+
T Consensus         1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~   79 (199)
T TIGR03724         1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI   79 (199)
T ss_pred             CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence            489999999999985 5678999975432211   112233466789999999998887555444445566779999999


Q ss_pred             cCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          413 TKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       413 ~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      +|++|.+++.....      .++.|++.+|.+||+.|++|+|++|.|||++ ++.++|+|||++...
T Consensus        80 ~g~~l~~~~~~~~~------~~~~~i~~~l~~lH~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~~  139 (199)
T TIGR03724        80 EGKPLKDVIEEGND------ELLREIGRLVGKLHKAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKYS  139 (199)
T ss_pred             CCccHHHHHhhcHH------HHHHHHHHHHHHHHHCCeecCCCCcceEEEE-CCcEEEEECCCCcCC
Confidence            99999988755322      7899999999999999999999999999999 899999999998753


No 415
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.77  E-value=2.8e-18  Score=169.18  Aligned_cols=142  Identities=14%  Similarity=0.130  Sum_probs=114.4

Q ss_pred             cccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHH------HHHHHHHHhhCCCCceeEEeeeec
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQ------LEQEIALLSRFEHENIVQYYGTDK  400 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~------~~~Ei~iL~~L~HpnIV~l~~~~~  400 (504)
                      +.++|++.++||.|+||.||++.. ++..+|+|++.......  ......      +++|+..+.++.|++|..+.+++.
T Consensus        29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~--~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~  105 (232)
T PRK10359         29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRT--ERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYL  105 (232)
T ss_pred             hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCch--HHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeee
Confidence            346899999999999999999655 57789999886433222  222233      689999999999999999988755


Q ss_pred             CC--------CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          401 DE--------SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       401 ~~--------~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                      ..        ...+|+|||++|.+|.++..   +++    ....+++.+|..||..|++||||||+||+++.+| ++|+|
T Consensus       106 ~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~---~~~----~~~~~i~~~l~~lH~~gi~H~Dikp~Nili~~~g-i~liD  177 (232)
T PRK10359        106 LAERKTLRYAHTYIMLIEYIEGVELNDMPE---ISE----DVKAKIKASIESLHQHGMVSGDPHKGNFIVSKNG-LRIID  177 (232)
T ss_pred             ecccccccccCCeEEEEEEECCccHHHhhh---ccH----HHHHHHHHHHHHHHHcCCccCCCChHHEEEeCCC-EEEEE
Confidence            33        35899999999999987732   222    2466999999999999999999999999999988 99999


Q ss_pred             cCccccc
Q 010676          473 FGLAKAT  479 (504)
Q Consensus       473 FGLA~~~  479 (504)
                      ||.....
T Consensus       178 fg~~~~~  184 (232)
T PRK10359        178 LSGKRCT  184 (232)
T ss_pred             CCCcccc
Confidence            9987654


No 416
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.77  E-value=2.9e-18  Score=163.25  Aligned_cols=143  Identities=20%  Similarity=0.188  Sum_probs=111.1

Q ss_pred             ceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchh-----------------hHHHHHHHHHHHHHHhhCCCC--
Q 010676          330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQ-----------------AKQSISQLEQEIALLSRFEHE--  390 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~-----------------~~~~~~~~~~Ei~iL~~L~Hp--  390 (504)
                      .|.+.+.||+|+||.||++...+|..||||++........                 .......+.+|+.++..+.|.  
T Consensus        16 ~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i   95 (198)
T cd05144          16 VESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEGF   95 (198)
T ss_pred             hhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcCC
Confidence            3778899999999999999988899999998764321100                 001112356789999888777  


Q ss_pred             ceeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEE
Q 010676          391 NIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKL  470 (504)
Q Consensus       391 nIV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL  470 (504)
                      .++..++.    ...++||||++|++|..+...     .....++.+|+.++.++|..||+|+||||.||+|+.++.++|
T Consensus        96 ~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-----~~~~~~~~~i~~~l~~lh~~gi~H~Dl~p~Nill~~~~~~~l  166 (198)
T cd05144          96 PVPKPIDW----NRHAVVMEYIDGVELYRVRVL-----EDPEEVLDEILEEIVKAYKHGIIHGDLSEFNILVDDDEKIYI  166 (198)
T ss_pred             CCCceeec----CCceEEEEEeCCcchhhcccc-----ccHHHHHHHHHHHHHHHHHCCCCcCCCCcccEEEcCCCcEEE
Confidence            44555543    345899999999998765431     345678899999999999999999999999999999999999


Q ss_pred             EecCccccccc
Q 010676          471 ADFGLAKATKL  481 (504)
Q Consensus       471 ~DFGLA~~~~~  481 (504)
                      +|||++.....
T Consensus       167 iDfg~~~~~~~  177 (198)
T cd05144         167 IDWPQMVSTDH  177 (198)
T ss_pred             EECCccccCCC
Confidence            99999865443


No 417
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.76  E-value=5.9e-18  Score=185.19  Aligned_cols=141  Identities=21%  Similarity=0.236  Sum_probs=112.5

Q ss_pred             ceeeeeeecccCceeEEEEEccCCceEEEEEEeccc-cc--hhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLD-QG--SQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLY  406 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~-~~--~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~ly  406 (504)
                      .|...++||+|+||.||++.+.... +++|...... ..  ........++.+|+.++..++|++++..+.++......+
T Consensus       334 ~~~~~~~iG~G~~g~Vy~~~~~~~~-~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~  412 (535)
T PRK09605        334 RKIPDHLIGKGAEADIKKGEYLGRD-AVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEEKT  412 (535)
T ss_pred             ccCccceeccCCcEEEEEEeecCcc-ceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCCCE
Confidence            3456788999999999999875443 3444322111 11  112233466889999999999999988877777777889


Q ss_pred             EEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          407 IFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       407 LVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      +||||+++++|.+++.       ....++.|++.+|.|||++||+||||||+|||+ .++.++|+|||+++..
T Consensus       413 lv~E~~~g~~L~~~l~-------~~~~~~~~i~~~L~~lH~~giiHrDlkp~NILl-~~~~~~liDFGla~~~  477 (535)
T PRK09605        413 IVMEYIGGKDLKDVLE-------GNPELVRKVGEIVAKLHKAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKYS  477 (535)
T ss_pred             EEEEecCCCcHHHHHH-------HHHHHHHHHHHHHHHHHhCCCccCCCChHHEEE-ECCcEEEEeCcccccC
Confidence            9999999999998875       356789999999999999999999999999999 6889999999999764


No 418
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.71  E-value=8.1e-17  Score=150.61  Aligned_cols=142  Identities=23%  Similarity=0.243  Sum_probs=100.0

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHH-------------------HHHHHHHHHHHhhCCCC--ce
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQS-------------------ISQLEQEIALLSRFEHE--NI  392 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~-------------------~~~~~~Ei~iL~~L~Hp--nI  392 (504)
                      ++.||+|+||.||+|.+.++..||||++............                   ......|...+..+.+.  .+
T Consensus         2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~   81 (187)
T cd05119           2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV   81 (187)
T ss_pred             CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence            5679999999999999988999999987643221111100                   01113556666655433  24


Q ss_pred             eEEeeeecCCCeEEEEEEeccCCCHHH-HHHhcCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEE
Q 010676          393 VQYYGTDKDESKLYIFLELVTKGSLLN-LYQRYHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKL  470 (504)
Q Consensus       393 V~l~~~~~~~~~lyLVmEy~~ggsL~~-ll~~~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL  470 (504)
                      .+++++    ...++||||++++.+.. .+...... ..+..++.+++.++.++|. +||+|+||||+|||++ ++.++|
T Consensus        82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~~~-~~~~~~~~~~~~~l~~lh~~~~ivH~Dl~p~Nili~-~~~~~l  155 (187)
T cd05119          82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVRLL-EDPEELYDQILELMRKLYREAGLVHGDLSEYNILVD-DGKVYI  155 (187)
T ss_pred             CceEec----CCCEEEEEEeCCCCccChhhhhhhhc-ccHHHHHHHHHHHHHHHhhccCcCcCCCChhhEEEE-CCcEEE
Confidence            444443    23599999999954321 12211111 5678899999999999999 9999999999999999 999999


Q ss_pred             EecCccccccc
Q 010676          471 ADFGLAKATKL  481 (504)
Q Consensus       471 ~DFGLA~~~~~  481 (504)
                      +|||.+.....
T Consensus       156 iDfg~a~~~~~  166 (187)
T cd05119         156 IDVPQAVEIDH  166 (187)
T ss_pred             EECcccccccC
Confidence            99999875443


No 419
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.68  E-value=3.3e-16  Score=154.93  Aligned_cols=142  Identities=18%  Similarity=0.203  Sum_probs=106.5

Q ss_pred             eeeec-ccCceeEEEEEccCCceEEEEEEecccc--------chhhHHHHHHHHHHHHHHhhCCCCce--eEEeeeecCC
Q 010676          334 GDLLG-RGSFGSVYEGISDDGFFFAVKEVSLLDQ--------GSQAKQSISQLEQEIALLSRFEHENI--VQYYGTDKDE  402 (504)
Q Consensus       334 ~k~LG-~G~FG~VYka~~~~g~~vAVK~v~~~~~--------~~~~~~~~~~~~~Ei~iL~~L~HpnI--V~l~~~~~~~  402 (504)
                      ...|| .||.|+||.+... +..++||.+.....        .........++.+|+.++..+.|++|  +..+++....
T Consensus        36 ~~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~  114 (239)
T PRK01723         36 ARVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVR  114 (239)
T ss_pred             CceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeee
Confidence            34577 7888888888764 67888887743110        00111233567889999999998775  6666654332


Q ss_pred             Ce----EEEEEEeccC-CCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          403 SK----LYIFLELVTK-GSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       403 ~~----lyLVmEy~~g-gsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      ..    .++|||+++| .+|.+++....++..    .+.||+.+|.+||++||+|+||||.|||++.++.++|+|||.+.
T Consensus       115 ~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~----~~~~i~~~l~~lH~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~  190 (239)
T PRK01723        115 HGLFYRADILIERIEGARDLVALLQEAPLSEE----QWQAIGQLIARFHDAGVYHADLNAHNILLDPDGKFWLIDFDRGE  190 (239)
T ss_pred             cCcceeeeEEEEecCCCCCHHHHHhcCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCchhEEEcCCCCEEEEECCCcc
Confidence            22    3599999997 689988877666554    36789999999999999999999999999999999999999987


Q ss_pred             ccc
Q 010676          478 ATK  480 (504)
Q Consensus       478 ~~~  480 (504)
                      ...
T Consensus       191 ~~~  193 (239)
T PRK01723        191 LRT  193 (239)
T ss_pred             cCC
Confidence            643


No 420
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves 
Probab=99.67  E-value=5e-16  Score=136.42  Aligned_cols=132  Identities=20%  Similarity=0.240  Sum_probs=110.4

Q ss_pred             eeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCC--CceeEEeeeecCCCeEEEEEE
Q 010676          333 KGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH--ENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       333 i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pnIV~l~~~~~~~~~lyLVmE  410 (504)
                      +.+.||+|.++.||++...+ ..+++|.+.....       ...+.+|+.++..++|  .++++++.++...+..|++||
T Consensus         2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~-------~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e   73 (155)
T cd05120           2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK-------GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLME   73 (155)
T ss_pred             cceecccccccceEEEEecC-CeEEEEecCCCCc-------hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEE
Confidence            35779999999999999855 6889997653221       3457789999999876  589999998888889999999


Q ss_pred             eccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC---CceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          411 LVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ---DVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       411 y~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~---gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      |+.++.+..+      +......++.+++.+|.+||..   +++|+||+|.|||++..+.++|+|||++..
T Consensus        74 ~~~g~~~~~~------~~~~~~~~~~~~~~~l~~lh~~~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~  138 (155)
T cd05120          74 WIEGETLDEV------SEEEKEDIAEQLAELLAKLHQLPLLVLCHGDLHPGNILVDDGKILGIIDWEYAGY  138 (155)
T ss_pred             ecCCeecccC------CHHHHHHHHHHHHHHHHHHhCCCceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence            9998877654      4456677899999999999985   699999999999999989999999999864


No 421
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.65  E-value=3.5e-16  Score=178.54  Aligned_cols=178  Identities=22%  Similarity=0.252  Sum_probs=133.3

Q ss_pred             CCccccccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeee
Q 010676          320 PNGRFKRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTD  399 (504)
Q Consensus       320 p~~~~~~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~  399 (504)
                      +...+..-...|.|-+.||+|+||.||+|...+|+.||+|+-+......  -..-.+++..++ +.  --+.|..+..++
T Consensus       689 ~~~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE--fYI~~q~~~RLk-~~--~~~~~~~~~~a~  763 (974)
T KOG1166|consen  689 PNTEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE--FYICLQVMERLK-PQ--MLPSIMHISSAH  763 (974)
T ss_pred             ccceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee--eeehHHHHHhhc-hh--hhcchHHHHHHH
Confidence            3333444456799999999999999999999889999999765432211  111112222222 11  134566666666


Q ss_pred             cCCCeEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-------CCcEEEE
Q 010676          400 KDESKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-------NGSVKLA  471 (504)
Q Consensus       400 ~~~~~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-------~g~VKL~  471 (504)
                      .-.+.-+||+||.+.|+|.++++..+ +++..+..+..||+.-|++||..+|||+||||+|+||..       ..-++|+
T Consensus       764 ~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~lI  843 (974)
T KOG1166|consen  764 VFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFSCQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYLI  843 (974)
T ss_pred             ccCCcceeeeeccccccHHHhhccCCCCCchhhhHHHHHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEEE
Confidence            77778899999999999999998654 888899999999999999999999999999999999943       2358999


Q ss_pred             ecCcccccc---cC-CcccccCCCcccccccccCC
Q 010676          472 DFGLAKATK---LN-DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       472 DFGLA~~~~---~~-~~~s~~GT~~YmAPEVL~g~  502 (504)
                      |||-+....   .+ .....++|-.+-.+|++.|+
T Consensus       844 DfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~gr  878 (974)
T KOG1166|consen  844 DFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGR  878 (974)
T ss_pred             ecccceeeeEcCCCcEEeeeeccccchhHHHhcCC
Confidence            999875432   22 34556789999999999886


No 422
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.64  E-value=2.3e-16  Score=174.90  Aligned_cols=171  Identities=27%  Similarity=0.402  Sum_probs=133.7

Q ss_pred             eeeeeecccCceeEEEEEc-cCCceEEEEEEeccc-cchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          332 QKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLD-QGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       332 ~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~-~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      ....++|.|.+|.|+.+.. .....++.|.+.... ...........+..|+.+-..+.|+|++..+....+....+-+|
T Consensus       321 ~~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~m  400 (601)
T KOG0590|consen  321 KPGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSM  400 (601)
T ss_pred             CccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhh
Confidence            3467899999998888766 344445555443110 11222222333777888888999999998888777777777779


Q ss_pred             EeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC-----
Q 010676          410 ELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND-----  483 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~-----  483 (504)
                      |||++ +|..++... .+....+..++.|++.||.|||+.||.|||||++|+++..+|.+||+|||.+.......     
T Consensus       401 E~~~~-Dlf~~~~~~~~~~~~e~~c~fKqL~~Gv~y~h~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~  479 (601)
T KOG0590|consen  401 EYCPY-DLFSLVMSNGKLTPLEADCFFKQLLRGVKYLHSMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIH  479 (601)
T ss_pred             hcccH-HHHHHHhcccccchhhhhHHHHHHHHHHHHHHhcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhh
Confidence            99999 999988876 78999999999999999999999999999999999999999999999999987543222     


Q ss_pred             -cccccCCCcccccccccCCC
Q 010676          484 -VKSCRGTAFWMAPEVCSNPF  503 (504)
Q Consensus       484 -~~s~~GT~~YmAPEVL~g~~  503 (504)
                       ....+|+..|+|||++.+..
T Consensus       480 ~~~g~~gS~pY~apE~~~~~~  500 (601)
T KOG0590|consen  480 ESSGIVGSDPYLAPEVLTGKE  500 (601)
T ss_pred             hhcCcccCCcCcCcccccccc
Confidence             23457999999999998753


No 423
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.63  E-value=1.3e-16  Score=182.17  Aligned_cols=115  Identities=15%  Similarity=0.203  Sum_probs=85.1

Q ss_pred             CCC-CceeEEeeee-------cCCCeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCceecCCC
Q 010676          387 FEH-ENIVQYYGTD-------KDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK  456 (504)
Q Consensus       387 L~H-pnIV~l~~~~-------~~~~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLK  456 (504)
                      ++| .||++++++|       .....++++|||+ +++|.+++...  .+++.+++.|++||+.||.|||++||||||||
T Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH~~gIvHrDlK  107 (793)
T PLN00181         29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAHSQGIVVHNVR  107 (793)
T ss_pred             hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHHhCCeeeccCC
Confidence            344 4777777776       3335678888987 45999999643  48999999999999999999999999999999


Q ss_pred             CCcEEEcCCC-------------------cEEEEecCcccccccC------C------------cccccCCCcccccccc
Q 010676          457 CANILVDANG-------------------SVKLADFGLAKATKLN------D------------VKSCRGTAFWMAPEVC  499 (504)
Q Consensus       457 P~NILLd~~g-------------------~VKL~DFGLA~~~~~~------~------------~~s~~GT~~YmAPEVL  499 (504)
                      |+||||+..|                   .+||+|||+++.....      .            ....+||++|||||++
T Consensus       108 P~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~  187 (793)
T PLN00181        108 PSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTSPEED  187 (793)
T ss_pred             chhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEChhhh
Confidence            9999996544                   4556666665431100      0            0113589999999998


Q ss_pred             cCC
Q 010676          500 SNP  502 (504)
Q Consensus       500 ~g~  502 (504)
                      .+.
T Consensus       188 ~~~  190 (793)
T PLN00181        188 NGS  190 (793)
T ss_pred             ccC
Confidence            764


No 424
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.62  E-value=3.7e-17  Score=176.74  Aligned_cols=162  Identities=27%  Similarity=0.447  Sum_probs=135.7

Q ss_pred             eecccCceeEEEEEc----cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEEEEE
Q 010676          336 LLGRGSFGSVYEGIS----DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       336 ~LG~G~FG~VYka~~----~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyLVmE  410 (504)
                      .+|+|.||.|+++..    ..|..||+|..+........+.   +...|..++..++ ||++|++...|+++..+|++++
T Consensus         1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~---~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld   77 (612)
T KOG0603|consen    1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRT---HTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILD   77 (612)
T ss_pred             CCCcCCCcchHHHHHhccccccchhhhhccccccccccccc---ccccHHHHHhhccCCCceeeeeeeeccccchhHhhh
Confidence            379999999998754    4677899998765444333332   4556788888887 9999999999999999999999


Q ss_pred             eccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcccccC
Q 010676          411 LVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRG  489 (504)
Q Consensus       411 y~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~G  489 (504)
                      |..||.|...+... .+.+..++.+...++-+++++|+.+|+|||+|++||+++.+|++++.|||+.+..-.....  ||
T Consensus        78 ~~rgg~lft~l~~~~~f~~~~~~~~~aelaLald~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~--cg  155 (612)
T KOG0603|consen   78 FLRGGDLFTRLSKEVMFDELDVAFYLAELALALDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIA--CG  155 (612)
T ss_pred             hcccchhhhccccCCchHHHHHHHHHHHHHHHHhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhc--cc
Confidence            99999888766554 4677788889999999999999999999999999999999999999999998865444333  89


Q ss_pred             CCcccccccccCC
Q 010676          490 TAFWMAPEVCSNP  502 (504)
Q Consensus       490 T~~YmAPEVL~g~  502 (504)
                      |..|||||+++|.
T Consensus       156 t~eymApEI~~gh  168 (612)
T KOG0603|consen  156 TYEYRAPEIINGH  168 (612)
T ss_pred             chhhhhhHhhhcc
Confidence            9999999999854


No 425
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.51  E-value=1.7e-14  Score=149.35  Aligned_cols=174  Identities=25%  Similarity=0.379  Sum_probs=128.2

Q ss_pred             ccccceeeeeeecccCceeEEEEEccC------------------------------------CceEEEEEEeccccchh
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGISDD------------------------------------GFFFAVKEVSLLDQGSQ  369 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~~~------------------------------------g~~vAVK~v~~~~~~~~  369 (504)
                      -.+++|++++.||+|.-..||.|...+                                    ....|||.+...+....
T Consensus       154 FtiddyeiG~~igkGC~AaVY~A~~~~dg~~le~~~~t~~~pgf~p~ts~p~e~~q~~~p~~~aFPLAiKmMfN~~~~s~  233 (598)
T KOG4158|consen  154 FTIDDYEIGEFIGKGCNAAVYSARLANDGSDLESSGNTHYGPGFNPVTSIPAEIPQVSKPAQKAFPLAIKMMFNFEHDSG  233 (598)
T ss_pred             cchhhhcccchhhccchhhhhhhhcCCCcccccccCCCCcCCCcCCCcCCcccCCcccCccccccchHHHHhcccccCCc
Confidence            346789999999999999999885321                                    12456776655555555


Q ss_pred             hHHHHHHHHHHHH------HH--------hh--------CCCCceeEEeeeecC--------------------------
Q 010676          370 AKQSISQLEQEIA------LL--------SR--------FEHENIVQYYGTDKD--------------------------  401 (504)
Q Consensus       370 ~~~~~~~~~~Ei~------iL--------~~--------L~HpnIV~l~~~~~~--------------------------  401 (504)
                      ....++.+-+|+.      ++        +.        -+|||||++..+|.+                          
T Consensus       234 ~~~iL~sM~~ElvPa~~~a~~~e~~~~t~R~l~nqtvhLa~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g  313 (598)
T KOG4158|consen  234 DAHILKSMGNELVPAPNAAKLLEGQMGTFRPLPNQTVHLAKHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAG  313 (598)
T ss_pred             hHHHHHHhhhhccCcchhhhhcccccceeeeCCCCCcccCCCCCEEeehhhhhhhhccCCchhhhCcccccceecccccC
Confidence            5555555555521      11        11        259999999887643                          


Q ss_pred             -CCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEc--CCC--cEEEEecCcc
Q 010676          402 -ESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVD--ANG--SVKLADFGLA  476 (504)
Q Consensus       402 -~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd--~~g--~VKL~DFGLA  476 (504)
                       ...+|+||..+.. +|..++.....+......++.|++.|+.|||++||.|||+|.+||||.  .++  .+.|+|||.|
T Consensus       314 ~~~tlylvMkrY~~-tLr~yl~~~~~s~r~~~~~laQlLEav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCc  392 (598)
T KOG4158|consen  314 EPKTLYLVMKRYRQ-TLREYLWTRHRSYRTGRVILAQLLEAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCC  392 (598)
T ss_pred             CCceEEEehhcchh-hHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccchhhcccccceEEEecCCCCcEEEEccccee
Confidence             3458999988865 899999888888888999999999999999999999999999999995  333  5789999987


Q ss_pred             cccccCCc--------ccccCCCccccccccc
Q 010676          477 KATKLNDV--------KSCRGTAFWMAPEVCS  500 (504)
Q Consensus       477 ~~~~~~~~--------~s~~GT~~YmAPEVL~  500 (504)
                      -.-.....        -..-|.-.-||||+..
T Consensus       393 LAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~t  424 (598)
T KOG4158|consen  393 LADDNHGLQLPYESDEVDLGGNAKLMAPEIAT  424 (598)
T ss_pred             eeccccccccccccccccCCCcceecchhhhh
Confidence            54322111        1223788899999976


No 426
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.49  E-value=1.6e-13  Score=147.20  Aligned_cols=145  Identities=20%  Similarity=0.121  Sum_probs=97.0

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhh-----------------------------HHHH------HHHHH
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQA-----------------------------KQSI------SQLEQ  379 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~-----------------------------~~~~------~~~~~  379 (504)
                      +.||.|++|.||+|+..+|+.||||+..........                             .+..      ..+.+
T Consensus       123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~  202 (437)
T TIGR01982       123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR  202 (437)
T ss_pred             cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence            569999999999999999999999987532111000                             0000      12344


Q ss_pred             HHHHHhhC----CCCceeEEeee-ecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHH-HHHHHHHCCceec
Q 010676          380 EIALLSRF----EHENIVQYYGT-DKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILL-GLKYLHDQDVVHR  453 (504)
Q Consensus       380 Ei~iL~~L----~HpnIV~l~~~-~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~-gL~yLHs~gIIHR  453 (504)
                      |...+.++    +|.+-+.+-.. +......+|||||++|++|.++........ ....++.+++. .+..+|..|++|+
T Consensus       203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~-~~~~ia~~~~~~~l~ql~~~g~~H~  281 (437)
T TIGR01982       203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL-DRKALAENLARSFLNQVLRDGFFHA  281 (437)
T ss_pred             HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC-CHHHHHHHHHHHHHHHHHhCCceeC
Confidence            55555444    23222232222 222345699999999999988764321111 23345555555 4678899999999


Q ss_pred             CCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          454 DIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       454 DLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      |+||.||+++.+|.++|+|||++....
T Consensus       282 D~hPgNilv~~~g~i~liDfG~~~~l~  308 (437)
T TIGR01982       282 DLHPGNIFVLKDGKIIALDFGIVGRLS  308 (437)
T ss_pred             CCCcccEEECCCCcEEEEeCCCeeECC
Confidence            999999999999999999999987654


No 427
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=99.47  E-value=4.7e-14  Score=145.73  Aligned_cols=170  Identities=25%  Similarity=0.360  Sum_probs=134.1

Q ss_pred             cceeeeeeecccCceeEEEEEcc------CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC-
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD------DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD-  401 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~------~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~-  401 (504)
                      .++++.-++-+|+||.||.|++.      +.+.+.+|.++.    ....-.+..+.+|--+|..+.|||+..+.+.+.+ 
T Consensus       284 ~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~----~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie~  359 (563)
T KOG1024|consen  284 CRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQ----HASQIQVNLLLQESMLLYGASHPNLLSVLGVSIED  359 (563)
T ss_pred             hheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHh----cccHHHHHHHHHHHHHHhcCcCCCccceeEEEeec
Confidence            35777888999999999999763      334555664432    2223345667888888999999999999987654 


Q ss_pred             CCeEEEEEEeccCCCHHHHHHhcC---------CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          402 ESKLYIFLELVTKGSLLNLYQRYH---------LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       402 ~~~lyLVmEy~~ggsL~~ll~~~~---------l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                      ....+.++.++..|+|..++..++         ++..++..++.|+..|++|||++|+||.||...|.+|++.-+|||+|
T Consensus       360 ~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltD  439 (563)
T KOG1024|consen  360 YATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTD  439 (563)
T ss_pred             cCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHHhcCcccchhhhhcceehhheeEEecc
Confidence            456788889999999999998433         55667788999999999999999999999999999999999999999


Q ss_pred             cCcccccccCCcccc----cCCCcccccccccCC
Q 010676          473 FGLAKATKLNDVKSC----RGTAFWMAPEVCSNP  502 (504)
Q Consensus       473 FGLA~~~~~~~~~s~----~GT~~YmAPEVL~g~  502 (504)
                      =.|++.....+....    -....||+||.+.+.
T Consensus       440 saLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~  473 (563)
T KOG1024|consen  440 SALSRDLFPGDYHCLGDNENRPVKWMSLEALQNS  473 (563)
T ss_pred             chhccccCcccccccCCCCCCcccccCHHHHhhh
Confidence            999987766554322    134569999988754


No 428
>PF14531 Kinase-like:  Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.45  E-value=5.3e-13  Score=135.59  Aligned_cols=167  Identities=25%  Similarity=0.327  Sum_probs=105.9

Q ss_pred             ceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCC---C-------c------e
Q 010676          330 YWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH---E-------N------I  392 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~H---p-------n------I  392 (504)
                      .+..++.||.|+|+.||.+++ .++..+|+|++....  ......++++++|.-....+.+   |       .      +
T Consensus        13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~--~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~   90 (288)
T PF14531_consen   13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPA--DASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDL   90 (288)
T ss_dssp             EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESS--TTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEE
T ss_pred             EEEEccccccCCceEEEEEEEccCCceEEEEEEeccc--ccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEE
Confidence            467789999999999999999 689999999987655  2334446677776644444322   1       1      2


Q ss_pred             eEEee---eecCC---C-----eEEEEEEeccCCCHHHHHHh---c-C----CChHHHHHHHHHHHHHHHHHHHCCceec
Q 010676          393 VQYYG---TDKDE---S-----KLYIFLELVTKGSLLNLYQR---Y-H----LRDSQVSAYTRQILLGLKYLHDQDVVHR  453 (504)
Q Consensus       393 V~l~~---~~~~~---~-----~lyLVmEy~~ggsL~~ll~~---~-~----l~e~~v~~i~~QIl~gL~yLHs~gIIHR  453 (504)
                      +++-+   ++...   .     ..+++|+-+. ++|.+++.-   . .    +.......+..|++..+++||.+||+|+
T Consensus        91 ~~i~~~~~~~~~~~~~~~~~v~n~~~l~P~~~-~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh~~GlVHg  169 (288)
T PF14531_consen   91 LRIPGKPPFFERGPGQSIYWVLNRFLLMPRAQ-GDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLHSYGLVHG  169 (288)
T ss_dssp             EEETTS-SEEEECETTEEEEEESEEEEEE--S-EEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEEES
T ss_pred             EEEcCCCcceecCCCCccceeehhhhccchhh-hcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHhhcceEec
Confidence            22211   11111   1     2366777774 478776532   1 1    1122234566899999999999999999


Q ss_pred             CCCCCcEEEcCCCcEEEEecCcccccccCCcccccCCCccccccccc
Q 010676          454 DIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       454 DLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~GT~~YmAPEVL~  500 (504)
                      ||+|+|||++.+|.++|+||+........... ...+..|.+||+..
T Consensus       170 di~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~-~~~~~~~~PPe~~~  215 (288)
T PF14531_consen  170 DIKPENFLLDQDGGVFLGDFSSLVRAGTRYRC-SEFPVAFTPPELES  215 (288)
T ss_dssp             T-SGGGEEE-TTS-EEE--GGGEEETTEEEEG-GGS-TTTS-HHHHH
T ss_pred             ccceeeEEEcCCCCEEEcChHHHeecCceeec-cCCCcccCChhhhh
Confidence            99999999999999999999876544433222 34567799999753


No 429
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.42  E-value=2e-13  Score=149.51  Aligned_cols=146  Identities=16%  Similarity=0.121  Sum_probs=93.5

Q ss_pred             cccceeeeeeecccCceeEEEEEccC-CceEEEEEEeccccch-----------------------------hhHHHHHH
Q 010676          327 IITYWQKGDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQGS-----------------------------QAKQSISQ  376 (504)
Q Consensus       327 ~~~~y~i~k~LG~G~FG~VYka~~~~-g~~vAVK~v~~~~~~~-----------------------------~~~~~~~~  376 (504)
                      +...|.. +.||.|++|.||+|+..+ |+.||||+........                             ...+....
T Consensus       118 ~F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~  196 (537)
T PRK04750        118 WFDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKT  196 (537)
T ss_pred             HHHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHH
Confidence            3445666 789999999999999976 9999999986321100                             00011122


Q ss_pred             ------HHHHHHHHhhC----CCCceeEEeeee-cCCCeEEEEEEeccCCCHHHH--HHhcCC-----ChHHHHHHHHHH
Q 010676          377 ------LEQEIALLSRF----EHENIVQYYGTD-KDESKLYIFLELVTKGSLLNL--YQRYHL-----RDSQVSAYTRQI  438 (504)
Q Consensus       377 ------~~~Ei~iL~~L----~HpnIV~l~~~~-~~~~~lyLVmEy~~ggsL~~l--l~~~~l-----~e~~v~~i~~QI  438 (504)
                            +.+|...+.++    .+.+.+.+-..+ .-....+|||||+.|+.+.++  +...+.     .+..+..++.|+
T Consensus       197 l~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g~d~~~la~~~v~~~~~Qi  276 (537)
T PRK04750        197 LHDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAGTDMKLLAERGVEVFFTQV  276 (537)
T ss_pred             HHHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence                  23344333333    233323322222 113456899999999999774  333333     333344445554


Q ss_pred             HHHHHHHHHCCceecCCCCCcEEEcCCC----cEEEEecCcccccc
Q 010676          439 LLGLKYLHDQDVVHRDIKCANILVDANG----SVKLADFGLAKATK  480 (504)
Q Consensus       439 l~gL~yLHs~gIIHRDLKP~NILLd~~g----~VKL~DFGLA~~~~  480 (504)
                      +       ..|++|+|+||.||+++.+|    .++++|||++....
T Consensus       277 f-------~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~  315 (537)
T PRK04750        277 F-------RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLN  315 (537)
T ss_pred             H-------hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECC
Confidence            4       58999999999999999888    99999999987554


No 430
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.39  E-value=1.2e-12  Score=120.03  Aligned_cols=128  Identities=20%  Similarity=0.164  Sum_probs=94.4

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCce-eEEeeeecCCCeEEEEEEec
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI-VQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~lyLVmEy~  412 (504)
                      .+.|+.|.++.||++... +..|++|.......      ....+.+|+.++..+.+.++ .+++.++.+  ..++||||+
T Consensus         3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~------~~~~~~~E~~~l~~l~~~~~~P~~~~~~~~--~~~lv~e~i   73 (170)
T cd05151           3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE------LLINRENEAENSKLAAEAGIGPKLYYFDPE--TGVLITEFI   73 (170)
T ss_pred             eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc------cccCHHHHHHHHHHHHHhCCCCceEEEeCC--CCeEEEEec
Confidence            356899999999999865 67899997643211      11235678888888764443 455555432  348999999


Q ss_pred             cCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCc-----eecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          413 TKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDV-----VHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       413 ~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gI-----IHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      +|.++...    .   .....++.+++.+|..||..++     +|+|++|.|||++ ++.++|+|||.+..
T Consensus        74 ~G~~l~~~----~---~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~~  136 (170)
T cd05151          74 EGSELLTE----D---FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAGM  136 (170)
T ss_pred             CCCccccc----c---ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEecccccC
Confidence            99877643    1   1123457899999999999885     9999999999998 77899999999864


No 431
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.38  E-value=5.3e-12  Score=121.92  Aligned_cols=142  Identities=17%  Similarity=0.148  Sum_probs=103.8

Q ss_pred             eeeecccCceeEEEEEccC-------CceEEEEEEeccccc---------------------hhhHHHHHHHHHHHHHHh
Q 010676          334 GDLLGRGSFGSVYEGISDD-------GFFFAVKEVSLLDQG---------------------SQAKQSISQLEQEIALLS  385 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~-------g~~vAVK~v~~~~~~---------------------~~~~~~~~~~~~Ei~iL~  385 (504)
                      ...||.|-=+.||.|...+       +..+|||+.+.....                     ..........++|+..|.
T Consensus         2 ~g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~   81 (197)
T cd05146           2 NGCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLK   81 (197)
T ss_pred             CCccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHH
Confidence            3568999999999998753       579999997542110                     111122223458999999


Q ss_pred             hCCC--CceeEEeeeecCCCeEEEEEEeccCCCHH-HHHHhcCCChHHHHHHHHHHHHHHHHH-HHCCceecCCCCCcEE
Q 010676          386 RFEH--ENIVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYL-HDQDVVHRDIKCANIL  461 (504)
Q Consensus       386 ~L~H--pnIV~l~~~~~~~~~lyLVmEy~~ggsL~-~ll~~~~l~e~~v~~i~~QIl~gL~yL-Hs~gIIHRDLKP~NIL  461 (504)
                      ++..  -++..++++    ..-+|||||+.++.+. ..++...++...+..++.+++.+|..| |+.||||+||++.|||
T Consensus        82 rl~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~~~i~~~l~~l~H~~glVHGDLs~~NIL  157 (197)
T cd05146          82 RMQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAYYQVLSMMKQLYKECNLVHADLSEYNML  157 (197)
T ss_pred             HHHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhccccCHHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEE
Confidence            8863  456666654    4568999999875442 234444456667778889999999998 8999999999999999


Q ss_pred             EcCCCcEEEEecCcccccc
Q 010676          462 VDANGSVKLADFGLAKATK  480 (504)
Q Consensus       462 Ld~~g~VKL~DFGLA~~~~  480 (504)
                      ++ ++.++|+|||.+....
T Consensus       158 ~~-~~~v~iIDF~qav~~~  175 (197)
T cd05146         158 WH-DGKVWFIDVSQSVEPT  175 (197)
T ss_pred             EE-CCcEEEEECCCceeCC
Confidence            96 5789999999886543


No 432
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.36  E-value=1.7e-13  Score=155.26  Aligned_cols=168  Identities=22%  Similarity=0.225  Sum_probs=131.0

Q ss_pred             ceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      +|...+.||.+.|=.|.+|++..|. |+||++...+....-... .+...|++ ...++|||++.+.-+..++...|||-
T Consensus        24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~-~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvR  100 (1431)
T KOG1240|consen   24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPF-KQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVR  100 (1431)
T ss_pred             ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHH-HHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHH
Confidence            6788899999999999999998887 889988765543333332 33334555 66678999999998888888899999


Q ss_pred             EeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc--ccCC---
Q 010676          410 ELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT--KLND---  483 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~--~~~~---  483 (504)
                      +|+.. +|.+.+.... +...+.+.|+.||+.||.-+|+.||+|+|||.+||||+.=..+.|+||.-.+-.  ..++   
T Consensus       101 qyvkh-nLyDRlSTRPFL~~iEKkWiaFQLL~al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPad  179 (1431)
T KOG1240|consen  101 QYVKH-NLYDRLSTRPFLVLIEKKWIAFQLLKALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPAD  179 (1431)
T ss_pred             HHHhh-hhhhhhccchHHHHHHHHHHHHHHHHHHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCccc
Confidence            99976 7777766554 566778899999999999999999999999999999999999999999876532  1111   


Q ss_pred             cccc----cCCCcccccccccC
Q 010676          484 VKSC----RGTAFWMAPEVCSN  501 (504)
Q Consensus       484 ~~s~----~GT~~YmAPEVL~g  501 (504)
                      ...+    ..-.+|.|||-|..
T Consensus       180 f~fFFDTSrRRtCYiAPERFv~  201 (1431)
T KOG1240|consen  180 FTFFFDTSRRRTCYIAPERFVS  201 (1431)
T ss_pred             ceEEEecCCceeeecChHhhhc
Confidence            2212    23346999998764


No 433
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.23  E-value=2.1e-11  Score=112.33  Aligned_cols=77  Identities=31%  Similarity=0.381  Sum_probs=66.6

Q ss_pred             CCHHHHHHh--cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCCcccccCCCc
Q 010676          415 GSLLNLYQR--YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLNDVKSCRGTAF  492 (504)
Q Consensus       415 gsL~~ll~~--~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~~~s~~GT~~  492 (504)
                      |+|.+++..  ..+++.+++.|+.||+.||.|||+++      ||+|||++.++.+|+  ||+++.....   ...||+.
T Consensus         1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~---~~~g~~~   69 (176)
T smart00750        1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELHRQA------KSGNILLTWDGLLKL--DGSVAFKTPE---QSRVDPY   69 (176)
T ss_pred             CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHhcC------CcccEeEcCccceee--ccceEeeccc---cCCCccc
Confidence            688998874  34999999999999999999999998      999999999999999  9998765432   2368999


Q ss_pred             ccccccccCC
Q 010676          493 WMAPEVCSNP  502 (504)
Q Consensus       493 YmAPEVL~g~  502 (504)
                      |||||++.++
T Consensus        70 y~aPE~~~~~   79 (176)
T smart00750       70 FMAPEVIQGQ   79 (176)
T ss_pred             ccChHHhcCC
Confidence            9999999765


No 434
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.22  E-value=6e-11  Score=112.67  Aligned_cols=140  Identities=19%  Similarity=0.193  Sum_probs=100.8

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCC--CceeEEeeeecCC---CeEEEEE
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH--ENIVQYYGTDKDE---SKLYIFL  409 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~H--pnIV~l~~~~~~~---~~lyLVm  409 (504)
                      +.|+.|.++.||++...+|..+++|........    .....+.+|+.++..+.+  .++.+++.+....   +..|+||
T Consensus         4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~----~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~   79 (223)
T cd05154           4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALL----PSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVM   79 (223)
T ss_pred             eecCCCccceEEEEEecCCcceEEEeCCCcccC----cccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEE
Confidence            568999999999998877788999976432211    123457789999998875  3456677776654   3678999


Q ss_pred             EeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH------------------------------------------
Q 010676          410 ELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD------------------------------------------  447 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs------------------------------------------  447 (504)
                      ||++|.+|...+....++......++.+++..|.+||+                                          
T Consensus        80 e~i~G~~l~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  159 (223)
T cd05154          80 ERVDGRVLRDRLLRPELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMER  159 (223)
T ss_pred             EEeCCEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHH
Confidence            99999877654422334555555566666666666652                                          


Q ss_pred             --------------CCceecCCCCCcEEEcC--CCcEEEEecCcccc
Q 010676          448 --------------QDVVHRDIKCANILVDA--NGSVKLADFGLAKA  478 (504)
Q Consensus       448 --------------~gIIHRDLKP~NILLd~--~g~VKL~DFGLA~~  478 (504)
                                    ..++|+|+++.|||++.  ++.+.|+||+.+..
T Consensus       160 ~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~  206 (223)
T cd05154         160 LLRWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL  206 (223)
T ss_pred             HHHHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence                          24699999999999998  66789999998754


No 435
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.20  E-value=1.6e-12  Score=144.45  Aligned_cols=170  Identities=30%  Similarity=0.423  Sum_probs=138.4

Q ss_pred             cceeeeeeecccCceeEEEEEcc--CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeE
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISD--DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKL  405 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~--~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~l  405 (504)
                      ..|.+.+.||+|.|+.|-.....  ....+|+|.+....   .......+...|..+-+.+. |.|++.+++.....+..
T Consensus        20 ~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~---~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~   96 (601)
T KOG0590|consen   20 SQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPP---KSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSY   96 (601)
T ss_pred             ccccccccccccccchhhhhhhcCCCcceeeccCCCCCC---CccchhhhcCccccccccccccccccccCCccCCCccc
Confidence            35777788999999999988773  44566666554432   22233445566888888887 99999999999999999


Q ss_pred             EEEEEeccCCCHHHHH-Hhc--CCChHHHHHHHHHHHHHHHHHH-HCCceecCCCCCcEEEcCCC-cEEEEecCcccccc
Q 010676          406 YIFLELVTKGSLLNLY-QRY--HLRDSQVSAYTRQILLGLKYLH-DQDVVHRDIKCANILVDANG-SVKLADFGLAKATK  480 (504)
Q Consensus       406 yLVmEy~~ggsL~~ll-~~~--~l~e~~v~~i~~QIl~gL~yLH-s~gIIHRDLKP~NILLd~~g-~VKL~DFGLA~~~~  480 (504)
                      +++++|..|+++...+ ...  .++......++.|+..+|.|+| ..++.|+||||+|.+++..+ .+++.|||+|..+.
T Consensus        97 ~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~  176 (601)
T KOG0590|consen   97 LLSLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYR  176 (601)
T ss_pred             ccccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCcccccccCCCCCccchhccCCCcccCCCchhhcccc
Confidence            9999999999998877 433  5777888999999999999999 99999999999999999999 99999999998765


Q ss_pred             c-CC----cccccC-CCcccccccccC
Q 010676          481 L-ND----VKSCRG-TAFWMAPEVCSN  501 (504)
Q Consensus       481 ~-~~----~~s~~G-T~~YmAPEVL~g  501 (504)
                      . +.    ....+| ++.|+|||++.+
T Consensus       177 ~~~g~~~~~~~~~g~s~~y~a~E~~~~  203 (601)
T KOG0590|consen  177 NKNGAERSLKDRCGSSPPYGAPEHLSG  203 (601)
T ss_pred             ccCCcceeeecccCCCCCCCCcccccc
Confidence            4 32    234468 999999999877


No 436
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.20  E-value=1.7e-10  Score=110.15  Aligned_cols=137  Identities=20%  Similarity=0.234  Sum_probs=100.6

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccc---cchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEe
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLD---QGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLEL  411 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~---~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy  411 (504)
                      .++++|.=+.+|.+.+. |..+++|.-....   .....+-...+..+|..++.++.--.|..-+-++.+.+...|+|||
T Consensus         2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~   80 (204)
T COG3642           2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY   80 (204)
T ss_pred             chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence            45789999999998664 3345666432211   1112233345677899999988755555444455566777899999


Q ss_pred             ccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          412 VTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       412 ~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      ++|..|.+++...      ...++..+-.-+.-||..||+|+||.++||++...+ +.++||||+...
T Consensus        81 I~G~~lkd~l~~~------~~~~~r~vG~~vg~lH~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~s  141 (204)
T COG3642          81 IEGELLKDALEEA------RPDLLREVGRLVGKLHKAGIVHGDLTTSNIILSGGR-IYFIDFGLGEFS  141 (204)
T ss_pred             eCChhHHHHHHhc------chHHHHHHHHHHHHHHhcCeecCCCccceEEEeCCc-EEEEECCccccc
Confidence            9999999888765      245777888888889999999999999999996444 999999998754


No 437
>PF01163 RIO1:  RIO1 family;  InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date.   Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=99.13  E-value=5e-10  Score=107.53  Aligned_cols=131  Identities=27%  Similarity=0.284  Sum_probs=88.7

Q ss_pred             eEEEEEccCCceEEEEEEeccc---------------------cchhhHHHHHHHHHHHHHHhhCCCC--ceeEEeeeec
Q 010676          344 SVYEGISDDGFFFAVKEVSLLD---------------------QGSQAKQSISQLEQEIALLSRFEHE--NIVQYYGTDK  400 (504)
Q Consensus       344 ~VYka~~~~g~~vAVK~v~~~~---------------------~~~~~~~~~~~~~~Ei~iL~~L~Hp--nIV~l~~~~~  400 (504)
                      .||.|...+|..+|+|+.....                     .............+|++.|.++..-  ++.+++++. 
T Consensus         1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~-   79 (188)
T PF01163_consen    1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN-   79 (188)
T ss_dssp             EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred             CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence            4899999999999999875421                     1112233345677899999999865  566777553 


Q ss_pred             CCCeEEEEEEecc--CCCHHHHHHhcCCChHHHHHHHHHHHHHHHH-HHHCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          401 DESKLYIFLELVT--KGSLLNLYQRYHLRDSQVSAYTRQILLGLKY-LHDQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       401 ~~~~lyLVmEy~~--ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~y-LHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                         .-+|||||++  |..+..+. ...++......++.+++..+.. +|+.||||+||.+.|||++.+ .+.|+|||.+.
T Consensus        80 ---~~~ivME~I~~~G~~~~~l~-~~~~~~~~~~~~~~~il~~~~~~~~~~givHGDLs~~NIlv~~~-~~~iIDf~qav  154 (188)
T PF01163_consen   80 ---RNVIVMEYIGEDGVPLPRLK-DVDLSPEEPKELLEEILEEIIKMLHKAGIVHGDLSEYNILVDDG-KVYIIDFGQAV  154 (188)
T ss_dssp             ---TTEEEEE--EETTEEGGCHH-HCGGGGSTHHHHHHHHHHHHHHHHHCTTEEESS-STTSEEEETT-CEEE--GTTEE
T ss_pred             ---CCEEEEEecCCCccchhhHH-hccccchhHHHHHHHHHHHHHHHHHhcCceecCCChhhEEeecc-eEEEEecCcce
Confidence               2479999999  65554433 3333355667788888886655 579999999999999999877 99999999886


Q ss_pred             ccc
Q 010676          478 ATK  480 (504)
Q Consensus       478 ~~~  480 (504)
                      ...
T Consensus       155 ~~~  157 (188)
T PF01163_consen  155 DSS  157 (188)
T ss_dssp             ETT
T ss_pred             ecC
Confidence            544


No 438
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.09  E-value=5.3e-11  Score=135.27  Aligned_cols=135  Identities=29%  Similarity=0.423  Sum_probs=94.0

Q ss_pred             ccccceeeeeeecccCceeEEEEEcc-CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe
Q 010676          326 RIITYWQKGDLLGRGSFGSVYEGISD-DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK  404 (504)
Q Consensus       326 ~~~~~y~i~k~LG~G~FG~VYka~~~-~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~  404 (504)
                      ....+|..+++|..|.||.||.+.++ +.+.+|+|+-+.   ..        +.+  ++|.....|++|           
T Consensus        80 p~e~df~~IklisngAygavylvrh~~trqrfa~kiNkq---~l--------ilR--nilt~a~npfvv-----------  135 (1205)
T KOG0606|consen   80 PSESDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQ---NL--------ILR--NILTFAGNPFVV-----------  135 (1205)
T ss_pred             CCccccceeEeeccCCCCceeeeeccccccchhhccccc---ch--------hhh--ccccccCCccee-----------
Confidence            34468899999999999999999884 566778753221   00        000  033333455544           


Q ss_pred             EEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccccCC
Q 010676          405 LYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATKLND  483 (504)
Q Consensus       405 lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~  483 (504)
                                |+-..+++..+ ++.        +++.+++|||+.||+|||+||+|++|..-|++|++|||+.+......
T Consensus       136 ----------gDc~tllk~~g~lPv--------dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~  197 (1205)
T KOG0606|consen  136 ----------GDCATLLKNIGPLPV--------DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSL  197 (1205)
T ss_pred             ----------chhhhhcccCCCCcc--------hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhc
Confidence                      34444444322 322        23789999999999999999999999999999999999987532111


Q ss_pred             -----------------cccccCCCcccccccccCC
Q 010676          484 -----------------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       484 -----------------~~s~~GT~~YmAPEVL~g~  502 (504)
                                       -+..|||+.|.||||+.-+
T Consensus       198 atnl~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrq  233 (1205)
T KOG0606|consen  198 ATNLKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQ  233 (1205)
T ss_pred             cchhhhcchHHHHHHhhhccccCCccccChhhhhhh
Confidence                             1235799999999998744


No 439
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.06  E-value=1.9e-09  Score=103.00  Aligned_cols=146  Identities=23%  Similarity=0.275  Sum_probs=104.1

Q ss_pred             eeeeecccCceeEEEEEccCCceEEEEEEeccc---cchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          333 KGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLD---QGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       333 i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~---~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      .+.+|-+|.-+.|+++.+. |+.+.||.-....   .....+-...+..+|.++|.++.--.|.--.-+|.+...-+|+|
T Consensus        11 ~l~likQGAEArv~~~~~~-Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M   89 (229)
T KOG3087|consen   11 SLELIKQGAEARVPRGSFS-GEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM   89 (229)
T ss_pred             cceeeeccceeeEeeeccC-CceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence            5678899999999999775 6666777532211   11223344567789999999886545444434455555668899


Q ss_pred             EeccCC-CHHHHHHhc---CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC---cEEEEecCccccc
Q 010676          410 ELVTKG-SLLNLYQRY---HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG---SVKLADFGLAKAT  479 (504)
Q Consensus       410 Ey~~gg-sL~~ll~~~---~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g---~VKL~DFGLA~~~  479 (504)
                      ||++|. ++.+++...   ...+.....++++|-..|.-||.++|||+||..+||++..+|   .+.|+|||++...
T Consensus        90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s  166 (229)
T KOG3087|consen   90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVS  166 (229)
T ss_pred             EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhcc
Confidence            999883 566666432   233334478899999999999999999999999999997655   3589999997643


No 440
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.05  E-value=7e-11  Score=117.88  Aligned_cols=164  Identities=18%  Similarity=0.288  Sum_probs=124.8

Q ss_pred             ceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEE
Q 010676          330 YWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       330 ~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      ...+.-+|.+...|..|+|++.. ..++.|++.......   ..-..|..|+-.|+.+.||||+.+++.|.....+.++.
T Consensus       191 ~lnl~tkl~e~hsgelwrgrwqg-ndivakil~vr~~t~---risrdfneefp~lrifshpnilpvlgacnsppnlv~is  266 (448)
T KOG0195|consen  191 SLNLITKLAESHSGELWRGRWQG-NDIVAKILNVREVTA---RISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIIS  266 (448)
T ss_pred             hhhhhhhhccCCCcccccccccC-cchhhhhhhhhhcch---hhcchhhhhCcceeeecCCchhhhhhhccCCCCceEee
Confidence            44455668888899999999864 445557665433221   12245778999999999999999999999999999999


Q ss_pred             EeccCCCHHHHHHhcC---CChHHHHHHHHHHHHHHHHHHHCC--ceecCCCCCcEEEcCCCcEEEE--ecCcccccccC
Q 010676          410 ELVTKGSLLNLYQRYH---LRDSQVSAYTRQILLGLKYLHDQD--VVHRDIKCANILVDANGSVKLA--DFGLAKATKLN  482 (504)
Q Consensus       410 Ey~~ggsL~~ll~~~~---l~e~~v~~i~~QIl~gL~yLHs~g--IIHRDLKP~NILLd~~g~VKL~--DFGLA~~~~~~  482 (504)
                      .|++.|+|+.++....   .+..++.+++..|+.|+.|||+..  |.---|....++||++-+.+|.  |--++-.   .
T Consensus       267 q~mp~gslynvlhe~t~vvvd~sqav~faldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfq---e  343 (448)
T KOG0195|consen  267 QYMPFGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQ---E  343 (448)
T ss_pred             eeccchHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeee---c
Confidence            9999999999998754   677889999999999999999875  4445788999999998877664  3222111   1


Q ss_pred             CcccccCCCcccccccccCC
Q 010676          483 DVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       483 ~~~s~~GT~~YmAPEVL~g~  502 (504)
                      .  ...-.|.||+||.|+.+
T Consensus       344 ~--gr~y~pawmspealqrk  361 (448)
T KOG0195|consen  344 V--GRAYSPAWMSPEALQRK  361 (448)
T ss_pred             c--ccccCcccCCHHHHhcC
Confidence            1  11246889999998765


No 441
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.00  E-value=1.8e-10  Score=123.34  Aligned_cols=97  Identities=28%  Similarity=0.457  Sum_probs=82.0

Q ss_pred             CeEEEEEEeccCCCHHHHHHhcC----CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYH----LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~----l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      .++||.|++|...+|.+++.+..    .+....+.++.|+..+++|   ++.+|+|+||.||++..+..+||.||||...
T Consensus       329 ~~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y---k~~ihrdlkp~nif~~~d~q~kIgDFgl~ts  405 (516)
T KOG1033|consen  329 VYLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY---KGLIHRDLKPSNIFFSDDDQLKIGDFGLVTS  405 (516)
T ss_pred             cchhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh---ccchhhhccccccccccchhhhhhhhhheee
Confidence            35899999999999999997543    4556788899999999999   9999999999999999999999999999765


Q ss_pred             cccCC--------cccccCCCcccccccccCC
Q 010676          479 TKLND--------VKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       479 ~~~~~--------~~s~~GT~~YmAPEVL~g~  502 (504)
                      .....        ++..+||.+||+||.|.|.
T Consensus       406 ~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~  437 (516)
T KOG1033|consen  406 QDKDETVAPAAASHTQQVGTLLYMSPEQIRGQ  437 (516)
T ss_pred             cccCCcccchhhhhhhcccccccCCHHHHhhh
Confidence            43322        3445699999999998864


No 442
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.96  E-value=1.1e-08  Score=103.29  Aligned_cols=141  Identities=12%  Similarity=0.074  Sum_probs=93.3

Q ss_pred             ecccCceeEEEEEccCCceEEEEEEeccccchhhHH------HHHHHHHHHHHHhhCCCCce--eEEeeeecC-----CC
Q 010676          337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQ------SISQLEQEIALLSRFEHENI--VQYYGTDKD-----ES  403 (504)
Q Consensus       337 LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~------~~~~~~~Ei~iL~~L~HpnI--V~l~~~~~~-----~~  403 (504)
                      +-.-....|+++.. +|+.|.||...........+.      ....+.+|+..+..|..-+|  +.++.++..     ..
T Consensus        30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~  108 (268)
T PRK15123         30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR  108 (268)
T ss_pred             EecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence            33333344555533 566788886532111000000      01136688888877743222  233333322     23


Q ss_pred             eEEEEEEeccCC-CHHHHHHh---cCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcC-------CCcEEEEe
Q 010676          404 KLYIFLELVTKG-SLLNLYQR---YHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDA-------NGSVKLAD  472 (504)
Q Consensus       404 ~lyLVmEy~~gg-sL~~ll~~---~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~-------~g~VKL~D  472 (504)
                      .-+||||++++. +|.+++..   ..........++.+++..+.-||..||+|+|+++.||||+.       ++.+.|+|
T Consensus       109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~~LID  188 (268)
T PRK15123        109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMHAAGINHRDCYICHFLLHLPFPGREEDLKLSVID  188 (268)
T ss_pred             eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHHHCcCccCCCChhhEEEeccccCCCCCceEEEEE
Confidence            578999999986 79888864   23555677789999999999999999999999999999975       46899999


Q ss_pred             cCcccc
Q 010676          473 FGLAKA  478 (504)
Q Consensus       473 FGLA~~  478 (504)
                      |+.+..
T Consensus       189 l~r~~~  194 (268)
T PRK15123        189 LHRAQI  194 (268)
T ss_pred             CCcccc
Confidence            998753


No 443
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.90  E-value=8.5e-09  Score=103.70  Aligned_cols=141  Identities=25%  Similarity=0.257  Sum_probs=107.7

Q ss_pred             eeeeeeecccCceeEEEEEccCCceEEEEEEecc-----------------ccchhhHHHHHHHHHHHHHHhhCCCC--c
Q 010676          331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLL-----------------DQGSQAKQSISQLEQEIALLSRFEHE--N  391 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~-----------------~~~~~~~~~~~~~~~Ei~iL~~L~Hp--n  391 (504)
                      +.++..||-|-=+.||.|.+..|..++||.-..-                 ....+........++|+..|.+|...  .
T Consensus        93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~  172 (304)
T COG0478          93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK  172 (304)
T ss_pred             HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence            5678899999999999999999999999963221                 11122233344567899999998755  6


Q ss_pred             eeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEE
Q 010676          392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLA  471 (504)
Q Consensus       392 IV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~  471 (504)
                      +.+.+++    +...+||||++|-.|...-    ++......++..|+.-+..+-..||||+|+.+-|||++.+|.+.++
T Consensus       173 VP~P~~~----nRHaVvMe~ieG~eL~~~r----~~~en~~~il~~il~~~~~~~~~GiVHGDlSefNIlV~~dg~~~vI  244 (304)
T COG0478         173 VPKPIAW----NRHAVVMEYIEGVELYRLR----LDVENPDEILDKILEEVRKAYRRGIVHGDLSEFNILVTEDGDIVVI  244 (304)
T ss_pred             CCCcccc----ccceeeeehcccceeeccc----CcccCHHHHHHHHHHHHHHHHHcCccccCCchheEEEecCCCEEEE
Confidence            7777654    5678999999996665432    2345566677778877777779999999999999999999999999


Q ss_pred             ecCccccc
Q 010676          472 DFGLAKAT  479 (504)
Q Consensus       472 DFGLA~~~  479 (504)
                      ||--+...
T Consensus       245 DwPQ~v~~  252 (304)
T COG0478         245 DWPQAVPI  252 (304)
T ss_pred             eCcccccC
Confidence            99876543


No 444
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.89  E-value=9.6e-10  Score=119.17  Aligned_cols=169  Identities=27%  Similarity=0.321  Sum_probs=131.8

Q ss_pred             ceeeeeeecc--cCceeEEEEEc---cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCC
Q 010676          330 YWQKGDLLGR--GSFGSVYEGIS---DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDES  403 (504)
Q Consensus       330 ~y~i~k~LG~--G~FG~VYka~~---~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~  403 (504)
                      .|.+.+.+|.  |.+|.||.+..   .++..+|+|.-+.......   .-..-.+|+...++++ |+|.++.+..+...+
T Consensus       115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~---~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~  191 (524)
T KOG0601|consen  115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPL---DSKRKLREFLSHHKIDSHENPVRDSPAWEGSG  191 (524)
T ss_pred             hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCcc---ccccccchhhcccccCccccccccCcccccCC
Confidence            4566777999  99999999876   5788899986432221111   1112236676677775 999999999999999


Q ss_pred             eEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHH----HHHHHHHCCceecCCCCCcEEEcCC-CcEEEEecCcc
Q 010676          404 KLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILL----GLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLA  476 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~----gL~yLHs~gIIHRDLKP~NILLd~~-g~VKL~DFGLA  476 (504)
                      .+|+-+|++. .+|..+....  .+.+..++.++.+...    ||.++|..+|+|-|+||.||++..+ ...+++|||+.
T Consensus       192 ~lfiqtE~~~-~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v  270 (524)
T KOG0601|consen  192 ILFIQTELCG-ESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLV  270 (524)
T ss_pred             cceeeecccc-chhHHhhhcccccCCchhhhhHHhhhhhcccccccccCCCcccccccchhheecccccceeecCCccee
Confidence            9999999997 5777766542  3788889999999999    9999999999999999999999999 88999999998


Q ss_pred             cccccCCccc-------ccCCCcccccccccCC
Q 010676          477 KATKLNDVKS-------CRGTAFWMAPEVCSNP  502 (504)
Q Consensus       477 ~~~~~~~~~s-------~~GT~~YmAPEVL~g~  502 (504)
                      ..+.......       ..|...|++||++++-
T Consensus       271 ~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l  303 (524)
T KOG0601|consen  271 SKISDGNFSSVFKVSKRPEGDCIYAAKELLNGL  303 (524)
T ss_pred             EEccCCccccceeeeecCCCCceEeChhhhccc
Confidence            8766554221       1367779999998864


No 445
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=98.87  E-value=2e-09  Score=116.24  Aligned_cols=119  Identities=29%  Similarity=0.548  Sum_probs=98.6

Q ss_pred             HhhCCCCceeEEeeeecCCCeEEEEEEeccCCCHHHHHHhc--CCChHHHHHHHHHHHHHHHHHHHCCc-eecCCCCCcE
Q 010676          384 LSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRY--HLRDSQVSAYTRQILLGLKYLHDQDV-VHRDIKCANI  460 (504)
Q Consensus       384 L~~L~HpnIV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~--~l~e~~v~~i~~QIl~gL~yLHs~gI-IHRDLKP~NI  460 (504)
                      |+.+.|.|+.++++.+.....+++|.+||..|+|.+++...  .+++.-...+++.|+.||.|||...| .|+.|+..|.
T Consensus         1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~s~i~~hg~l~s~nC   80 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHNSPIGYHGALKSSNC   80 (484)
T ss_pred             CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhcCcceeeeeeccccc
Confidence            45688999999999999999999999999999999998764  36666677788999999999998776 9999999999


Q ss_pred             EEcCCCcEEEEecCccccccc----CCcccccCCCcccccccccCC
Q 010676          461 LVDANGSVKLADFGLAKATKL----NDVKSCRGTAFWMAPEVCSNP  502 (504)
Q Consensus       461 LLd~~g~VKL~DFGLA~~~~~----~~~~s~~GT~~YmAPEVL~g~  502 (504)
                      +++....+||.|||+......    .......-...|.|||++.+.
T Consensus        81 lvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~  126 (484)
T KOG1023|consen   81 LVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGA  126 (484)
T ss_pred             eeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhccc
Confidence            999999999999999765532    111122234569999999863


No 446
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=98.82  E-value=2.2e-08  Score=110.21  Aligned_cols=119  Identities=24%  Similarity=0.350  Sum_probs=98.4

Q ss_pred             cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcCCChHH
Q 010676          351 DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQ  430 (504)
Q Consensus       351 ~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~  430 (504)
                      .++.++.|..++....     .......+-++.|+.++||||++|++.++....+|||+|-+.  -|..++++.+  ...
T Consensus        35 ~~~~~vsVF~~~~~~~-----~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~--~~~  105 (690)
T KOG1243|consen   35 ADGGPVSVFVYKRSNG-----EVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG--KEE  105 (690)
T ss_pred             ccCCceEEEEEeCCCc-----hhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH--HHH
Confidence            5677888887764332     223445677888999999999999999999999999999985  4666776543  667


Q ss_pred             HHHHHHHHHHHHHHHH-HCCceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          431 VSAYTRQILLGLKYLH-DQDVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       431 v~~i~~QIl~gL~yLH-s~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      +..-+.||+.||.||| +.+++|++|.-+.|+|+..|..||++|-++..
T Consensus       106 v~~Gl~qIl~AL~FL~~d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~  154 (690)
T KOG1243|consen  106 VCLGLFQILAALSFLNDDCNLVHGNVCKDSVFVNESGEWKLGGLELVSK  154 (690)
T ss_pred             HHHHHHHHHHHHHHHhccCCeeeccEeeeeEEEcCCCcEEEeeeEEEec
Confidence            7788999999999997 67899999999999999999999999988753


No 447
>PF06293 Kdo:  Lipopolysaccharide kinase (Kdo/WaaP) family;  InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []:   Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins)   Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane
Probab=98.81  E-value=2.9e-08  Score=95.98  Aligned_cols=106  Identities=24%  Similarity=0.296  Sum_probs=80.5

Q ss_pred             HHHHHHHHHHhhCCCCc--eeEEeeeecCC----CeEEEEEEeccCC-CHHHHHHh-cCCChHHHHHHHHHHHHHHHHHH
Q 010676          375 SQLEQEIALLSRFEHEN--IVQYYGTDKDE----SKLYIFLELVTKG-SLLNLYQR-YHLRDSQVSAYTRQILLGLKYLH  446 (504)
Q Consensus       375 ~~~~~Ei~iL~~L~Hpn--IV~l~~~~~~~----~~lyLVmEy~~gg-sL~~ll~~-~~l~e~~v~~i~~QIl~gL~yLH  446 (504)
                      .+..+|+..+..|..-.  .+..+.+....    ...+||||++++. +|.+++.. ...+......++.++...+.-||
T Consensus        56 ~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r~~~~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll~~l~~~i~~lH  135 (206)
T PF06293_consen   56 SRAKREWRNLQRLREAGIPTPEPVAYGERRKGGGYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELLRALARLIAKLH  135 (206)
T ss_pred             hHHHHHHHHHHHHHHcCCCCCcEEEEEEEcCCCceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHHHHHHHHHHHHH
Confidence            45667877776664322  33334443331    3458999999885 78888876 23566677889999999999999


Q ss_pred             HCCceecCCCCCcEEEcCCC---cEEEEecCcccccc
Q 010676          447 DQDVVHRDIKCANILVDANG---SVKLADFGLAKATK  480 (504)
Q Consensus       447 s~gIIHRDLKP~NILLd~~g---~VKL~DFGLA~~~~  480 (504)
                      .+||+|+|+++.|||++.++   .+.|+||+-++...
T Consensus       136 ~~gi~H~Dl~~~NILv~~~~~~~~~~lIDld~~~~~~  172 (206)
T PF06293_consen  136 DAGIYHGDLNPSNILVDPDDGQYRFYLIDLDRMRFRP  172 (206)
T ss_pred             HCcCCCCCCCcccEEEeCCCCceeEEEEcchhceeCC
Confidence            99999999999999999887   89999999876543


No 448
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=98.80  E-value=6.1e-09  Score=113.02  Aligned_cols=152  Identities=25%  Similarity=0.200  Sum_probs=120.0

Q ss_pred             ccccccceeeeeeecccCceeEEEEEc--cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeec
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGIS--DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDK  400 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~--~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~  400 (504)
                      ......+|..+..||.|.|+.||....  .++..|++|.+.......  ...+. -..|+.+...+. |.++++++..|.
T Consensus       260 ~s~~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~--~~di~-sl~ev~l~~~l~~~~~~~g~~~~W~  336 (524)
T KOG0601|consen  260 TSCKLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATF--ASDIF-SLGEVILEAILGSHLPSVGKNSSWS  336 (524)
T ss_pred             ceeecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccch--Hhhhc-chhhhhHhhHhhcccccCCCCCCcc
Confidence            445667899999999999999998764  578899999765433222  11122 235666666654 999999999998


Q ss_pred             CCCeEEEEEEeccCCCHHHHHH-hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCC-CcEEEEecCcccc
Q 010676          401 DESKLYIFLELVTKGSLLNLYQ-RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDAN-GSVKLADFGLAKA  478 (504)
Q Consensus       401 ~~~~lyLVmEy~~ggsL~~ll~-~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~-g~VKL~DFGLA~~  478 (504)
                      ...+.|+-.|||.++++..... ...+.+...+.+..|++.++.++|+..++|+|+||+||++..+ +..++.|||....
T Consensus       337 ~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~~q~~~~l~~i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~  416 (524)
T KOG0601|consen  337 QLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLTAQILTALNVIHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTR  416 (524)
T ss_pred             ccccccCchhhhcCcchhhhhHHHHhcCcchhhhhHHHHHhccccccchhhhcccccccceeeccchhhhhccccccccc
Confidence            8899999999999988765442 2347778889999999999999999999999999999999886 7789999998754


No 449
>PRK09902 hypothetical protein; Provisional
Probab=98.62  E-value=2.8e-07  Score=90.16  Aligned_cols=141  Identities=16%  Similarity=0.153  Sum_probs=98.0

Q ss_pred             ecccCceeEEEEEccCCceEEEEEEeccccchhh-HHHHHHHHHHHHHHhhCCCCc--eeEEeeeecC----CCeEEEEE
Q 010676          337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQA-KQSISQLEQEIALLSRFEHEN--IVQYYGTDKD----ESKLYIFL  409 (504)
Q Consensus       337 LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~-~~~~~~~~~Ei~iL~~L~Hpn--IV~l~~~~~~----~~~lyLVm  409 (504)
                      -|+||-+.|+....... .|-+|.-......... ......|.+|+..|..|..-+  +.+.......    .-.-+||+
T Consensus        26 ~~rgG~SgV~r~~~~g~-~~ylKrq~nhl~~s~r~P~g~ptf~rE~~~L~~L~~~GvPVP~pvf~~~~k~~~~~rA~LVT  104 (216)
T PRK09902         26 YRRNGMSGVQCVERNGK-KLYVKRMTHHLFHSVRYPFGRPTIVREVAVIKELERAGVIVPKIVFGEAVKIEGEWRALLVT  104 (216)
T ss_pred             cCCCCcceEEEEEeCCc-EEEEEeccCcccccccCCCCchHHHHHHHHHHHHHHcCCCCCccceeeeeccCCceEEEEEE
Confidence            36788899998655433 5777754311111100 113356889999988875322  4444422111    23468999


Q ss_pred             EeccC-CCHHHHHHhcCC---ChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCc--EEEEecCcccc
Q 010676          410 ELVTK-GSLLNLYQRYHL---RDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGS--VKLADFGLAKA  478 (504)
Q Consensus       410 Ey~~g-gsL~~ll~~~~l---~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~--VKL~DFGLA~~  478 (504)
                      |-+.+ -+|.+++....+   +......++.++...|.-||..|+.|+|+.+.|||++.+|.  |+++||--++.
T Consensus       105 e~L~g~~~L~~~l~~~~~~~~~~~~k~~il~~va~~ia~LH~~Gv~Hgdly~khIll~~~g~~~v~lIDlEk~r~  179 (216)
T PRK09902        105 EDMAGFISIADWYAQHAVSPYSDEVRQAMLKAVALAFKKMHSVNRQHGCCYVRHIYVKTEGKAEAGFLDLEKSRR  179 (216)
T ss_pred             EeCCCCccHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHCCCcCCCCCHhheeecCCCCeeEEEEEhhccch
Confidence            97764 488888876544   56666789999999999999999999999999999987777  99999986653


No 450
>COG0661 AarF Predicted unusual protein kinase [General function prediction only]
Probab=98.61  E-value=1.1e-07  Score=104.24  Aligned_cols=144  Identities=17%  Similarity=0.203  Sum_probs=91.7

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEecccc----------------------c---hh----hHHHHHH------HHH
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQ----------------------G---SQ----AKQSISQ------LEQ  379 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~----------------------~---~~----~~~~~~~------~~~  379 (504)
                      +.|+.++-|.||+|+..+|+.||||+....-.                      .   ..    ..+..+.      +.+
T Consensus       131 ~PiAsASIaQVH~A~L~sG~~VAVKVqrPgi~~~i~~DL~il~~~a~~~~~~~~~~~~l~~~~vv~e~~~~l~~ElDy~~  210 (517)
T COG0661         131 EPIASASIAQVHRAVLKSGEEVAVKVQRPGIRERIEADLKLLRRLARLIKRLPPGGRRLDLVEVVDEFEKRLREELDYRR  210 (517)
T ss_pred             CchhhhhHhhheeEEecCCCEEEEEecCCChHHHHHHHHHHHHHHHHHHHHcCCccccCChHHHHHHHHHHHHHHhCHHH
Confidence            56899999999999999999999998542110                      0   00    0011111      233


Q ss_pred             HHHHHhhCC-----CCceeEEeeeecCCCeEEEEEEeccCCCHHHH--HHhcCCChHHHHHHHHHHHHHHHHHHHCCcee
Q 010676          380 EIALLSRFE-----HENIVQYYGTDKDESKLYIFLELVTKGSLLNL--YQRYHLRDSQVSAYTRQILLGLKYLHDQDVVH  452 (504)
Q Consensus       380 Ei~iL~~L~-----HpnIV~l~~~~~~~~~lyLVmEy~~ggsL~~l--l~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIH  452 (504)
                      |...+.++.     .++|.--.=++.-...-.|+|||++|..+.++  ++..+++...+.....+++-  ..+-..|++|
T Consensus       211 EA~n~~~~~~nf~~~~~v~VP~V~we~t~~~VLtmE~i~Gi~i~d~~~l~~~g~d~k~ia~~~~~~f~--~q~~~dgffH  288 (517)
T COG0661         211 EAANAERFRENFKDDPDVYVPKVYWEYTTRRVLTMEWIDGIKISDIAALKSAGIDRKELAELLVRAFL--RQLLRDGFFH  288 (517)
T ss_pred             HHHHHHHHHHHcCCCCCeEeceeehhccCCcEEEEEeeCCEecccHHHHHhcCCCHHHHHHHHHHHHH--HHHHhcCccc
Confidence            444443332     23322111122333456899999999988876  55666775444333332222  2233479999


Q ss_pred             cCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          453 RDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       453 RDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      .|.+|.||+++.+|++.+.|||+...+.
T Consensus       289 aDpHpGNi~v~~~g~i~~lDfGi~g~l~  316 (517)
T COG0661         289 ADPHPGNILVRSDGRIVLLDFGIVGRLD  316 (517)
T ss_pred             cCCCccceEEecCCcEEEEcCcceecCC
Confidence            9999999999999999999999976554


No 451
>COG1718 RIO1 Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms / Cell division and chromosome partitioning]
Probab=98.61  E-value=4.4e-07  Score=90.56  Aligned_cols=140  Identities=19%  Similarity=0.197  Sum_probs=98.6

Q ss_pred             eecccCceeEEEEEccCCceEEEEEEeccccch-------------------hhHHHHHHHHHHHHHHhhCC--CCceeE
Q 010676          336 LLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGS-------------------QAKQSISQLEQEIALLSRFE--HENIVQ  394 (504)
Q Consensus       336 ~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~-------------------~~~~~~~~~~~Ei~iL~~L~--HpnIV~  394 (504)
                      .|..|--+.||+|...++..+|+|+++......                   .........+.|+..|.++.  +=.+.+
T Consensus        55 ~istGKEA~Vy~a~~~~~~~~avKiyr~~t~~fk~~~~Yi~gd~Rf~~~~~~rr~lv~~W~~kEf~NL~R~~eAGVrvP~  134 (268)
T COG1718          55 CISTGKEANVYLAETGDGRYVAVKIYRTSTSEFKRIRRYIQGDPRFRNSRSNRRKLVFAWARKEFRNLKRAYEAGVRVPE  134 (268)
T ss_pred             eecCCcceEEEeeccCCCceEEEEEEehhhhhhhhHHHHHhcChhhhcCCCCHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence            567777789999999899999999986532211                   11122233456787777764  333444


Q ss_pred             EeeeecCCCeEEEEEEeccCCCH-HHHHHhcCCChHHHHHHHHHHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEe
Q 010676          395 YYGTDKDESKLYIFLELVTKGSL-LNLYQRYHLRDSQVSAYTRQILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       395 l~~~~~~~~~lyLVmEy~~ggsL-~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                      -+.+..    -.|||||+....+ .-.|+.-.+....+..+..+++..+.-|-. .++||+||+.-|||+. ++.+.|||
T Consensus       135 Pi~~~~----nVLvMEfIg~~g~pAP~LkDv~~e~~e~~~~~~~~v~~~~~l~~~a~LVHgDLSEyNiL~~-~~~p~iID  209 (268)
T COG1718         135 PIAFRN----NVLVMEFIGDDGLPAPRLKDVPLELEEAEGLYEDVVEYMRRLYKEAGLVHGDLSEYNILVH-DGEPYIID  209 (268)
T ss_pred             ceeecC----CeEEEEeccCCCCCCCCcccCCcCchhHHHHHHHHHHHHHHHHHhcCcccccchhhheEEE-CCeEEEEE
Confidence            444432    3799999976421 112333334444678888999999998877 8999999999999998 99999999


Q ss_pred             cCcccccc
Q 010676          473 FGLAKATK  480 (504)
Q Consensus       473 FGLA~~~~  480 (504)
                      ||-|....
T Consensus       210 ~~QaV~~~  217 (268)
T COG1718         210 VSQAVTID  217 (268)
T ss_pred             CccccccC
Confidence            99887554


No 452
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.53  E-value=6.5e-07  Score=96.54  Aligned_cols=135  Identities=16%  Similarity=0.258  Sum_probs=105.3

Q ss_pred             eeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecC----CCeEEEEEEeccCC-C
Q 010676          343 GSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKD----ESKLYIFLELVTKG-S  416 (504)
Q Consensus       343 G~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~----~~~lyLVmEy~~gg-s  416 (504)
                      .+.|+++. .+|..|++|++.........     ....-+++++++.|.|||.+.++|.+    +..+++|++|.++. +
T Consensus       290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~n-----k~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~T  364 (655)
T KOG3741|consen  290 ITTYKATSNVDGNAYVLKRLHGDRDQSTN-----KDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPT  364 (655)
T ss_pred             ceeEeeeeccCCceeeeeeeccccccCcc-----cchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCch
Confidence            57899987 79999999988432222211     12345788999999999999988863    45699999999864 6


Q ss_pred             HHHHHH----------------hcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          417 LLNLYQ----------------RYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       417 L~~ll~----------------~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      |.+++-                ..+.++..++.|+.|+..||.++|+.|+..+-|.+.+||++.+.+++|...|+...+.
T Consensus       365 L~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~  444 (655)
T KOG3741|consen  365 LYDLYFANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIHSSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQ  444 (655)
T ss_pred             HHHHHccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHhcCceeecccHhHeEeeCcceEEEecccceeeec
Confidence            766542                1236778899999999999999999999999999999999988889998877765554


Q ss_pred             cC
Q 010676          481 LN  482 (504)
Q Consensus       481 ~~  482 (504)
                      .+
T Consensus       445 ~d  446 (655)
T KOG3741|consen  445 ED  446 (655)
T ss_pred             CC
Confidence            43


No 453
>KOG1235 consensus Predicted unusual protein kinase [General function prediction only]
Probab=98.44  E-value=1.3e-06  Score=95.91  Aligned_cols=142  Identities=16%  Similarity=0.125  Sum_probs=92.4

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccch--------------------------hhHHHHHH------HHHHHH
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGS--------------------------QAKQSISQ------LEQEIA  382 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~--------------------------~~~~~~~~------~~~Ei~  382 (504)
                      +.||.-+.|.||+|+..+|..||||+-+..-...                          ...+..+.      |.+|.+
T Consensus       167 ~piaaASlaQVhrA~L~~G~~VaVKVQ~P~l~~~~~~Dl~~~~~~~~~l~k~~p~~~~~~lvdE~~~~L~~ELDF~~EA~  246 (538)
T KOG1235|consen  167 EPIAAASLAQVHRARLKNGEDVAVKVQHPGLEKLIMLDLRNLRLLAKVLQKFFPDFDLVWLVDEIAKSLPQELDFTKEAK  246 (538)
T ss_pred             chhhhcchhheEEEEecCCCEEEEEecCcChHHHHHHHHHHHHHHHHHHHHhCcCCchhhHHHHHHhhhHhhcchHHHHH
Confidence            4589999999999999999999999853211100                          00011111      223332


Q ss_pred             HH----hhCCCCc------eeEEeeeecCCCeEEEEEEeccCCCHHH--HHHhcCCChHHHHHHHHHHHHHHHHHHHCCc
Q 010676          383 LL----SRFEHEN------IVQYYGTDKDESKLYIFLELVTKGSLLN--LYQRYHLRDSQVSAYTRQILLGLKYLHDQDV  450 (504)
Q Consensus       383 iL----~~L~Hpn------IV~l~~~~~~~~~lyLVmEy~~ggsL~~--ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gI  450 (504)
                      ..    +.+.|-+      |.++|..+.  ..-.|+||||+|..+.+  .+.+.+++...+...+.++..-+-  =..|+
T Consensus       247 Nae~~~~~f~~~~~~~~V~VP~Vy~~~s--t~RVLtME~~~G~~i~Dl~~i~~~gi~~~~i~~~l~~~~~~qI--f~~Gf  322 (538)
T KOG1235|consen  247 NAERFRENFKDFSLLTYVLVPKVYWDLS--TKRVLTMEYVDGIKINDLDAIDKRGISPHDILNKLVEAYLEQI--FKTGF  322 (538)
T ss_pred             hHHHHHHHHHhcccccceeCCeehhhcC--cceEEEEEecCCccCCCHHHHHHcCCCHHHHHHHHHHHHHHHH--HhcCC
Confidence            22    2233444      455554443  34689999999986654  567778887765554444443332  24689


Q ss_pred             eecCCCCCcEEEcC----CCcEEEEecCcccccc
Q 010676          451 VHRDIKCANILVDA----NGSVKLADFGLAKATK  480 (504)
Q Consensus       451 IHRDLKP~NILLd~----~g~VKL~DFGLA~~~~  480 (504)
                      +|+|-+|.||++..    ++.+.|.|||+...+.
T Consensus       323 fHaDPHPGNilv~~~~~~~~~ivllDhGl~~~is  356 (538)
T KOG1235|consen  323 FHADPHPGNILVRPNPEGDEEIVLLDHGLYAVIS  356 (538)
T ss_pred             ccCCCCCCcEEEecCCCCCccEEEEccccccccc
Confidence            99999999999984    5689999999987554


No 454
>PF06176 WaaY:  Lipopolysaccharide core biosynthesis protein (WaaY);  InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY). The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process
Probab=98.39  E-value=4.5e-06  Score=82.27  Aligned_cols=139  Identities=17%  Similarity=0.203  Sum_probs=85.0

Q ss_pred             cceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHH------HHHHHHHHhhCCCC---ceeEEe---
Q 010676          329 TYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQ------LEQEIALLSRFEHE---NIVQYY---  396 (504)
Q Consensus       329 ~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~------~~~Ei~iL~~L~Hp---nIV~l~---  396 (504)
                      .+|.+.+++-.....-|.+.. .+|..+.+|.......  ........      ..+++..+..++..   .+..++   
T Consensus        31 ~~~~~~kv~k~~~r~~ValIe-i~~~kyIlK~pr~~~~--r~er~~~sf~kg~~~~~l~~~~~~i~~~g~~~~~~~yl~~  107 (229)
T PF06176_consen   31 NNYKIIKVFKNTKRNYVALIE-IDGKKYILKEPREENR--RPERRFKSFFKGSEYSRLINNTDKIRNEGFTEPADPYLAA  107 (229)
T ss_pred             CCceEEEeecCCCccEEEEEE-ECCcEEEEeccchhhh--hHHHHHHHHhccHHHHHHHHHHHHHHHcCccccccceeee
Confidence            456667777666655555543 4567888887643221  11111221      22344444333221   222221   


Q ss_pred             --eeecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecC
Q 010676          397 --GTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFG  474 (504)
Q Consensus       397 --~~~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFG  474 (504)
                        -.+.-....+|+|||++|..|.++..   +.+    .+...|...|.-||+.|++|+|++|.|++++.++ ++++||+
T Consensus       108 ekk~~~~~~~~~ll~EYIeG~~l~d~~~---i~e----~~~~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~-i~iID~~  179 (229)
T PF06176_consen  108 EKKIFRYTSSYVLLMEYIEGVELNDIED---IDE----DLAEKIVEAIKQLHKHGFYHGDPHPGNFLVSNNG-IRIIDTQ  179 (229)
T ss_pred             eeeeccceeEEEEEEEEecCeecccchh---cCH----HHHHHHHHHHHHHHHcCCccCCCCcCcEEEECCc-EEEEECc
Confidence              22333345679999999987766532   222    2445677889999999999999999999998544 9999998


Q ss_pred             cccc
Q 010676          475 LAKA  478 (504)
Q Consensus       475 LA~~  478 (504)
                      ..+.
T Consensus       180 ~k~~  183 (229)
T PF06176_consen  180 GKRM  183 (229)
T ss_pred             cccc
Confidence            7543


No 455
>PF01636 APH:  Phosphotransferase enzyme family This family is part of the larger protein kinase superfamily.;  InterPro: IPR002575 This entry consists of bacterial antibiotic resistance proteins, which confer resistance to various aminoglycosides they include:- aminoglycoside 3'-phosphotransferase or kanamycin kinase / neomycin-kanamycin phosphotransferase and streptomycin 3''-kinase or streptomycin 3''-phosphotransferase. The aminoglycoside phosphotransferases inactivate aminoglycoside antibiotics via phosphorylation []. The proteins are found in a range of taxonomic groups.; PDB: 2PPQ_A 2Q83_B 3TDV_B 3TDW_A 3I0O_A 3I0Q_A 3I1A_B 3Q2M_A 3HAV_C 2PUI_B ....
Probab=98.37  E-value=4.4e-06  Score=79.32  Aligned_cols=137  Identities=21%  Similarity=0.267  Sum_probs=79.4

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCC--ceeEEeeee---cCCCeEEEE
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE--NIVQYYGTD---KDESKLYIF  408 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp--nIV~l~~~~---~~~~~lyLV  408 (504)
                      ++.|+.|..+.||++...+ ..+++|.....       .....+.+|..+++.+...  .+.+++.+.   ......+++
T Consensus         2 i~~l~~G~~n~~~~v~~~~-~~~vlK~~~~~-------~~~~~~~~e~~~~~~l~~~~~pvP~~~~~~~~~~~~~~~~~~   73 (239)
T PF01636_consen    2 IRPLSGGFSNRVYRVTTDD-GRYVLKFYRPP-------DAAERLRREAAVLRQLAEHGIPVPRVLAFDTSDEFNGFPYLL   73 (239)
T ss_dssp             EEEEEESSSSEEEEEEETT-SEEEEEEESSH-------HHHHHHHHHHHHHHHHHHTTSBS--EEEEEEETEETSEEEEE
T ss_pred             CccCCCCCeeeEEEEEECC-cEEEEEEeCCC-------CCHHHHHHHHHHHHHHHhcCCCCceEEeecccccccccceEE
Confidence            4679999999999999877 58888976421       2335566788777776522  345565533   233457999


Q ss_pred             EEeccCCCHHH----------------HHH---hc--C---CChHH---------HHHH------------HHHHHH-HH
Q 010676          409 LELVTKGSLLN----------------LYQ---RY--H---LRDSQ---------VSAY------------TRQILL-GL  442 (504)
Q Consensus       409 mEy~~ggsL~~----------------ll~---~~--~---l~e~~---------v~~i------------~~QIl~-gL  442 (504)
                      |++++|..+..                .+.   ..  .   +....         ....            ...+.. .+
T Consensus        74 ~~~i~g~~~~~~~~~~~~~~~~~~~~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  153 (239)
T PF01636_consen   74 MEYIPGRPLDDELSPEQRPELLRQLGRALAQLHQVPPPFSPFADWPEWRLEFLRQLESWTARLRASELFDDLEELEERLL  153 (239)
T ss_dssp             EEEESSEEHHHTSTHHHHHHHHHHHHHHHHHHHHSHTTCCCHTHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred             EEEeccccccccccccccccccccchhhhhhcccccccccccccccccccccccccccccccccchhhhhhhHHHHHHHH
Confidence            99999987766                111   11  0   00000         0000            011122 23


Q ss_pred             HHHH-------HCCceecCCCCCcEEEc-CCCcEEEEecCcccc
Q 010676          443 KYLH-------DQDVVHRDIKCANILVD-ANGSVKLADFGLAKA  478 (504)
Q Consensus       443 ~yLH-------s~gIIHRDLKP~NILLd-~~g~VKL~DFGLA~~  478 (504)
                      ..++       ...++|+|+.+.|||++ .++.+.|+||+.+..
T Consensus       154 ~~~~~~~~~~~~~~~~HgD~~~~Nil~~~~~~~i~iID~e~a~~  197 (239)
T PF01636_consen  154 QELEALLPKPLPPVLIHGDLHPGNILVDPSDGRIGIIDFEDAGW  197 (239)
T ss_dssp             HHHHHHHHCCSCEEEE-SS-SGGGEEEESSTTEEEE--GTT-EE
T ss_pred             HHHHhhhccCCCcEEEEeccccccceeeeccceeEEEecccceE
Confidence            3333       23599999999999999 667778999998753


No 456
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.37  E-value=3.4e-07  Score=94.04  Aligned_cols=93  Identities=27%  Similarity=0.492  Sum_probs=78.9

Q ss_pred             HHHHHHhhCCCCceeEEeeeecCC-----CeEEEEEEeccCCCHHHHHHhc-----CCChHHHHHHHHHHHHHHHHHHHC
Q 010676          379 QEIALLSRFEHENIVQYYGTDKDE-----SKLYIFLELVTKGSLLNLYQRY-----HLRDSQVSAYTRQILLGLKYLHDQ  448 (504)
Q Consensus       379 ~Ei~iL~~L~HpnIV~l~~~~~~~-----~~lyLVmEy~~ggsL~~ll~~~-----~l~e~~v~~i~~QIl~gL~yLHs~  448 (504)
                      .-+..|-++-|-|||+++.|+.+.     ....+++||+..|+|.+++++.     .+......+|+.||++||.|||+.
T Consensus       116 ~vFdnllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~  195 (458)
T KOG1266|consen  116 AVFDNLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC  195 (458)
T ss_pred             HHHHHHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc
Confidence            345556667799999999887554     3478999999999999998754     377788899999999999999987


Q ss_pred             C--ceecCCCCCcEEEcCCCcEEEE
Q 010676          449 D--VVHRDIKCANILVDANGSVKLA  471 (504)
Q Consensus       449 g--IIHRDLKP~NILLd~~g~VKL~  471 (504)
                      .  |+|+++.++.|++..+|-+||.
T Consensus       196 ~PpiihgnlTc~tifiq~ngLIkig  220 (458)
T KOG1266|consen  196 DPPIIHGNLTCDTIFIQHNGLIKIG  220 (458)
T ss_pred             CCccccCCcchhheeecCCceEEec
Confidence            4  9999999999999999998875


No 457
>TIGR02172 Fb_sc_TIGR02172 Fibrobacter succinogenes paralogous family TIGR02172. This model describes a paralogous family of five proteins, likely to be enzymes, in the rumen bacterium Fibrobacter succinogenes S85. Members show homology to proteins described by PFAM model pfam01636, a phosphotransferase enzyme family associated with resistance to aminoglycoside antibiotics. However, members of this family score below the current trusted and noise cutoffs for pfam01636.
Probab=98.29  E-value=7.4e-06  Score=80.67  Aligned_cols=133  Identities=12%  Similarity=0.123  Sum_probs=81.0

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCc--eeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN--IVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn--IV~l~~~~~~~~~lyLVmEy~  412 (504)
                      .+||+|..+.||+.   .+..+++|......       ....+.+|.+++..+..-.  +.+.+.+....+.+++|||++
T Consensus         7 ~~i~~G~t~~~y~~---~~~~~VlR~~~~~~-------~~~~i~~E~~~l~~l~~~glpvP~~~~~~~~~~~~glv~e~i   76 (226)
T TIGR02172         7 TQTGEGGNGESYTH---KTGKWMLKLYNPGF-------DKETIKREFDASRKVFSLGIPTPHPFDLVEDGGRLGLIYELI   76 (226)
T ss_pred             eeecCCCCcceeEe---cCCCEEEEeCCCCC-------CHHHHHHHHHHHHHHHHcCCCCCceEEEEecCCeeeeeeeec
Confidence            46899999999984   24467788664211       1133578888888876333  466777777777789999999


Q ss_pred             cCCC-HHHHH---------------------Hhc---CCChHH-HHHHHHH----------HHHH-HHHHHH----CCce
Q 010676          413 TKGS-LLNLY---------------------QRY---HLRDSQ-VSAYTRQ----------ILLG-LKYLHD----QDVV  451 (504)
Q Consensus       413 ~ggs-L~~ll---------------------~~~---~l~e~~-v~~i~~Q----------Il~g-L~yLHs----~gII  451 (504)
                      +|.. +...+                     ..-   ...... ...+..+          +... ..+|..    ..++
T Consensus        77 ~G~~~~~~~~~~~~~~~~~l~~~la~~l~~lH~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~~~l~~~~~~~~~~  156 (226)
T TIGR02172        77 VGKRSFSRIISDNPSRLEEIAKIFAEMAKKLHSTKCDTSTFQSYKEKIRKFIEEKDFVPKDYKEKARAFIKEVPDTSTCL  156 (226)
T ss_pred             CCccchhhhhcCCHHHHHHHHHHHHHHHHHHhCCCCCCCcHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHhCCCCCceE
Confidence            9963 21111                     000   001000 0111111          1111 122221    2478


Q ss_pred             ecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          452 HRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       452 HRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      |+|++|.||+++.++ +.|+||+.+..
T Consensus       157 HgD~~~~Nii~~~~~-~~iIDwe~a~~  182 (226)
T TIGR02172       157 HGDFQIGNLITSGKG-TYWIDLGDFGY  182 (226)
T ss_pred             ecCCCCCcEEEcCCC-cEEEechhcCc
Confidence            999999999999888 99999998753


No 458
>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH). The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio
Probab=98.28  E-value=7.2e-06  Score=80.39  Aligned_cols=132  Identities=18%  Similarity=0.149  Sum_probs=79.9

Q ss_pred             ecccCc-eeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCceeEEeeeecCCCeEEEEEEeccC
Q 010676          337 LGRGSF-GSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENIVQYYGTDKDESKLYIFLELVTK  414 (504)
Q Consensus       337 LG~G~F-G~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnIV~l~~~~~~~~~lyLVmEy~~g  414 (504)
                      |-.|.. ..||+.... +..+.+|+.....        ...+.+|+.+++.+. +--+.++++++...+..++||++++|
T Consensus         6 ~~~g~~~~~v~~~~~~-~~~~~vk~~~~~~--------~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G   76 (244)
T cd05150           6 VTEGQSGATVYRLDGK-NPGLYLKIAPSGP--------TYELEREAERLRWLAGKLPVPEVIDYGSDDGRAWLLTSAVPG   76 (244)
T ss_pred             cCCCCCcCeEEEEcCC-CCcEEEEecCCCc--------ccchHHHHHHHHHHHhcCCCCeEEEEEecCCccEEEEEeeCC
Confidence            444555 788998764 4677888654221        124567888777764 34466777777766778999999999


Q ss_pred             CCHHHHH----------------Hhc-CCCh-----H-HHHHHHHH-----------------------HHHHHHHHH--
Q 010676          415 GSLLNLY----------------QRY-HLRD-----S-QVSAYTRQ-----------------------ILLGLKYLH--  446 (504)
Q Consensus       415 gsL~~ll----------------~~~-~l~e-----~-~v~~i~~Q-----------------------Il~gL~yLH--  446 (504)
                      ..|....                ..- .++.     . .......+                       +...+..|-  
T Consensus        77 ~~l~~~~~~~~~~~~~~~l~~~l~~lH~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  156 (244)
T cd05150          77 VPAAALWEELEPERLVDALAEALRRLHALPVADCPFDRRLDRRLAEARARVENGLVDEDDFDDERRGWSAEELYAELEAT  156 (244)
T ss_pred             ccHhHhhcccCHHHHHHHHHHHHHHHhcCCcccCCcchhHHHHHHHHHHHHhcCCcChhhCcHhhcCCCHHHHHHHHHhh
Confidence            8775431                000 0100     0 00000000                       111112221  


Q ss_pred             -----HCCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          447 -----DQDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       447 -----s~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                           ...++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       157 ~~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDwe~a~  192 (244)
T cd05150         157 RPAEEDLVVTHGDACLPNIIVDPGKFSGFIDLGRLG  192 (244)
T ss_pred             CCCcCceEEECCCCCCccEEEeCCcEEEEEEccccc
Confidence                 1248999999999999988778899999875


No 459
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=98.21  E-value=3.6e-07  Score=104.71  Aligned_cols=151  Identities=17%  Similarity=0.181  Sum_probs=116.4

Q ss_pred             ccccccceeeeeeecccCceeEEEEEc-cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCC
Q 010676          324 FKRIITYWQKGDLLGRGSFGSVYEGIS-DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDE  402 (504)
Q Consensus       324 ~~~~~~~y~i~k~LG~G~FG~VYka~~-~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~  402 (504)
                      |+.-.+.+.+.+.+-+|.|+.++.+.- ..|...+.|...+...  .....++....+-.++....+|.++.....+...
T Consensus       799 yrsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~--i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~r  876 (1205)
T KOG0606|consen  799 YRSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPK--IRTNDYESIRSKSNILITPRSPAVVRSFPSFPCR  876 (1205)
T ss_pred             ccCCCccceecccccCCCCcccccCCccccccccchhhhccchh--hccccccccCCccCccccCCCCceecccCCCCCC
Confidence            566678899999999999999998876 4565566665432211  1111223333444455555678888887777778


Q ss_pred             CeEEEEEEeccCCCHHHHHHhcC-CChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          403 SKLYIFLELVTKGSLLNLYQRYH-LRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       403 ~~lyLVmEy~~ggsL~~ll~~~~-l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                      ..++++++|+.+++|...++.-+ .+.+-...+...++.+++|||...++|+|++|.|+|+..+|+.++.|||+.
T Consensus       877 sP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i~~~vqs~e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~  951 (1205)
T KOG0606|consen  877 SPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPILERVQSLESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTL  951 (1205)
T ss_pred             CCcchhhHHhccCCchhhhhcCCCcccccccchhHHHHhhhhccccchhhcccccccchhhcccCCcccCccccc
Confidence            88999999999999999888766 666667778889999999999999999999999999999999999999843


No 460
>PF10707 YrbL-PhoP_reg:  PhoP regulatory network protein YrbL;  InterPro: IPR019647  This entry represents proteins that are activated by the protein PhoP. PhoP controls the expression of a large number of genes that mediate adaptation to low Mg2+ environments and/or virulence in several bacterial species. YbrL is proposed to be acting in a loop activity with PhoP and PrmA analogous to the multi-component loop in Salmonella sp., where the PhoP-dependent PmrD protein activates the regulatory protein PmrA, and the activated PmrA then represses transcription from the PmrD promoter which harbours binding sites for both the PhoP and PmrA proteins. Expression of YrbL is induced in low Mg2+ in a PhoP-dependent fashion and repressed by Fe3+ in a PmrA-dependent manner []. 
Probab=98.12  E-value=4.7e-05  Score=73.92  Aligned_cols=137  Identities=21%  Similarity=0.322  Sum_probs=94.6

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccch-----------hhHHHHHHHHHHHHHHhhCC------CCceeEEee
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGS-----------QAKQSISQLEQEIALLSRFE------HENIVQYYG  397 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~-----------~~~~~~~~~~~Ei~iL~~L~------HpnIV~l~~  397 (504)
                      .+||+|+.-.||.-  .+....+||+........           .......+..+|+.....+.      +.+|.+++|
T Consensus         7 ~~i~~G~~R~cy~H--P~dp~~cIKV~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~E~~~y~~l~~~~~~~~~~i~r~~G   84 (199)
T PF10707_consen    7 DLIAQGGERDCYQH--PDDPNLCIKVMRPDRGERRRPFKRWLKRLRPKSRYRQNRRELRYYKQLSLRRGVDWSHIPRFYG   84 (199)
T ss_pred             cccccCCCceEEEC--CCCCCeEEEEEccccccccccchhHHHhhcccchhHHHHHHHHHHHHHhhccCCcccccccEeE
Confidence            56999999999964  445566788775433000           00111234455555554444      789999999


Q ss_pred             eecCCCeEEEEEEeccCC------CHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCC----c
Q 010676          398 TDKDESKLYIFLELVTKG------SLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANG----S  467 (504)
Q Consensus       398 ~~~~~~~lyLVmEy~~gg------sL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g----~  467 (504)
                      +.+++-.+-+|+|.+...      +|.+++....++. .+.   ..+-.-..||-.++|+.+||+|.||++..+.    .
T Consensus        85 ~veT~~G~Glv~e~I~d~dG~~s~TL~~~l~~~~~~~-~~~---~~L~~f~~~l~~~~Iv~~dl~~~NIv~~~~~~~~~~  160 (199)
T PF10707_consen   85 FVETNLGLGLVVELIRDADGNISPTLEDYLKEGGLTE-ELR---QALDEFKRYLLDHHIVIRDLNPHNIVVQRRDSGEFR  160 (199)
T ss_pred             EEecCCceEEEEEEEECCCCCcCccHHHHHHcCCccH-HHH---HHHHHHHHHHHHcCCeecCCCcccEEEEecCCCceE
Confidence            999999999999988532      6888988877776 333   3344445678889999999999999996432    5


Q ss_pred             EEEEe-cCccc
Q 010676          468 VKLAD-FGLAK  477 (504)
Q Consensus       468 VKL~D-FGLA~  477 (504)
                      +.|+| ||-..
T Consensus       161 lvlIDG~G~~~  171 (199)
T PF10707_consen  161 LVLIDGLGEKE  171 (199)
T ss_pred             EEEEeCCCCcc
Confidence            77887 66543


No 461
>COG2112 Predicted Ser/Thr protein kinase [Signal transduction mechanisms]
Probab=97.96  E-value=3.3e-05  Score=73.82  Aligned_cols=129  Identities=20%  Similarity=0.188  Sum_probs=89.8

Q ss_pred             eeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCce-eEEeeeecCCCeEEEEEE
Q 010676          332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI-VQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       332 ~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~lyLVmE  410 (504)
                      +..+.|++|++|.||++.+..+ .+|+|+-....       ....++.|.++|..++-.++ .++|.+..+    ++.||
T Consensus        25 ~v~~~L~KG~~s~Vyl~~~~~~-~~a~Kvrr~ds-------~r~~l~kEakiLeil~g~~~~p~vy~yg~~----~i~me   92 (201)
T COG2112          25 RVEKELAKGTTSVVYLGEWRGG-EVALKVRRRDS-------PRRNLEKEAKILEILAGEGVTPEVYFYGED----FIRME   92 (201)
T ss_pred             hhhhhhhcccccEEEEeeccCc-eEEEEEecCCc-------chhhHHHHHHHHHHhhhcCCCceEEEechh----hhhhh
Confidence            4567899999999999988644 78888654221       23567889999998886554 455655443    45599


Q ss_pred             eccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCC-CCcEEEcCCCcEEEEecCcccc
Q 010676          411 LVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIK-CANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       411 y~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLK-P~NILLd~~g~VKL~DFGLA~~  478 (504)
                      |+.|-.|.......  ...+    ...++..---|-..||-|..|. |..++|..++.+.|+||.-|+.
T Consensus        93 ~i~G~~L~~~~~~~--~rk~----l~~vlE~a~~LD~~GI~H~El~~~~k~vlv~~~~~~iIDFd~At~  155 (201)
T COG2112          93 YIDGRPLGKLEIGG--DRKH----LLRVLEKAYKLDRLGIEHGELSRPWKNVLVNDRDVYIIDFDSATF  155 (201)
T ss_pred             hhcCcchhhhhhcc--cHHH----HHHHHHHHHHHHHhccchhhhcCCceeEEecCCcEEEEEccchhh
Confidence            99998887765432  2222    3344444444667899999997 5555555666999999998874


No 462
>PF12260 PIP49_C:  Protein-kinase domain of FAM69;  InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C). Proteins in this uncharacterised family are described as transmembrane proteins.
Probab=97.95  E-value=2.8e-05  Score=74.67  Aligned_cols=95  Identities=25%  Similarity=0.213  Sum_probs=78.7

Q ss_pred             HHHHHHhhCCC-CceeEEeeeecCCCeEEEEEEeccCCCHHH----HHHhcCCChHHHHHHHHHHHHHHHHHHH---CCc
Q 010676          379 QEIALLSRFEH-ENIVQYYGTDKDESKLYIFLELVTKGSLLN----LYQRYHLRDSQVSAYTRQILLGLKYLHD---QDV  450 (504)
Q Consensus       379 ~Ei~iL~~L~H-pnIV~l~~~~~~~~~lyLVmEy~~ggsL~~----ll~~~~l~e~~v~~i~~QIl~gL~yLHs---~gI  450 (504)
                      .|..+++.+++ +++++++|+|..    ++|+||+..+++..    +.+-...++..+..|+.+++..+.+|+.   ..+
T Consensus         8 ~E~lll~~l~~~~~~pk~lG~CG~----~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA~~lL~~l~~l~~~~~~~~   83 (188)
T PF12260_consen    8 NEPLLLQLLQGSEPFPKLLGSCGR----FYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIALQLLELLEELDHGPLGFF   83 (188)
T ss_pred             cHHHHHHHcCCCCCCCCeeeECCC----EEEEEeecCccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCCCcE
Confidence            58888888885 699999999843    67999999776642    2222346889999999999999999987   347


Q ss_pred             eecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          451 VHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       451 IHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      .-+|++++||.|+.+|++|++|...+.
T Consensus        84 ~lcDv~~~nfgv~~~~~lk~iDld~v~  110 (188)
T PF12260_consen   84 YLCDVSPDNFGVNDDGRLKLIDLDDVF  110 (188)
T ss_pred             EEeecchHHeEEeCCCcEEEEechhcc
Confidence            789999999999999999999998764


No 463
>PLN02876 acyl-CoA dehydrogenase
Probab=97.93  E-value=8.4e-05  Score=86.15  Aligned_cols=79  Identities=15%  Similarity=0.204  Sum_probs=53.8

Q ss_pred             eeeecccCceeEEEEEccCC---ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCC-CCce--eEEeeeecCC---Ce
Q 010676          334 GDLLGRGSFGSVYEGISDDG---FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFE-HENI--VQYYGTDKDE---SK  404 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g---~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~-HpnI--V~l~~~~~~~---~~  404 (504)
                      .+.|+.|.+..+|+....++   ..+++|+.......    .....+.+|+.+|+.+. |.+|  .+++.++.+.   +.
T Consensus        43 v~~l~gG~sn~ty~l~~~~~~~~~~~VLR~~p~~~~~----~~~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d~~v~G~  118 (822)
T PLN02876         43 VSQFGHGQSNPTFLLEVGNGGSVKRYVLRKKPPGKLL----QSAHAVEREYQVLRALGEHTDVPVPKVYCLCTDASVIGT  118 (822)
T ss_pred             EEEeCCCCcCceEEEEECCCCcceeEEEEeCCCCccC----ccHHHHHHHHHHHHHHhhcCCCCCCcEEEEecCCCcCCC
Confidence            46689999999999876543   35666654321110    11235779999999885 6654  7777776654   46


Q ss_pred             EEEEEEeccCCC
Q 010676          405 LYIFLELVTKGS  416 (504)
Q Consensus       405 lyLVmEy~~ggs  416 (504)
                      .|+||||++|..
T Consensus       119 ~flVME~v~G~~  130 (822)
T PLN02876        119 AFYIMEYLEGRI  130 (822)
T ss_pred             ceEEEEecCCcc
Confidence            789999999864


No 464
>cd05155 APH_ChoK_like_1 Uncharacterized bacterial proteins with similarity to Aminoglycoside 3'-phosphotransferase (APH) and Choline kinase (ChoK) family members. The APH/ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates, such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides, and macrolides leads to their inactivation and to bacterial antibiotic resista
Probab=97.93  E-value=5.6e-05  Score=74.04  Aligned_cols=72  Identities=13%  Similarity=0.135  Sum_probs=43.3

Q ss_pred             eeecccCce-eEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCC---ceeEEeeeecCC---CeEEE
Q 010676          335 DLLGRGSFG-SVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE---NIVQYYGTDKDE---SKLYI  407 (504)
Q Consensus       335 k~LG~G~FG-~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp---nIV~l~~~~~~~---~~lyL  407 (504)
                      +.|+.|+.. .||+.    +..+++|....   .    .....+.+|..+|..+...   -+.+++......   ...|+
T Consensus         3 ~~~~~gG~~n~vy~~----~~~~VlR~~~~---~----~~~~~~~~E~~~l~~L~~~~~v~vP~~~~~~~~~~~~~~~~~   71 (235)
T cd05155           3 EPVDSGGTDNATFRL----GDDMSVRLPSA---A----GYAGQVRKEQRWLPRLAPHLPLPVPEPLGKGEPGEGYPWPWS   71 (235)
T ss_pred             eeccCCCcccceEEc----CCceEEEcCCc---c----chHHHHHHHHHHHHHHhccCCCCCCceeecCCCccCCCcceE
Confidence            467877776 48976    23466675331   1    1123577888888777521   344445444332   23588


Q ss_pred             EEEeccCCCH
Q 010676          408 FLELVTKGSL  417 (504)
Q Consensus       408 VmEy~~ggsL  417 (504)
                      +|++++|.++
T Consensus        72 l~~~i~G~~l   81 (235)
T cd05155          72 VYRWLEGETA   81 (235)
T ss_pred             EEEeecCCCC
Confidence            9999998765


No 465
>KOG2268 consensus Serine/threonine protein kinase [Signal transduction mechanisms; General function prediction only]
Probab=97.92  E-value=7.8e-06  Score=84.57  Aligned_cols=138  Identities=17%  Similarity=0.218  Sum_probs=98.7

Q ss_pred             eeeeeeecccCceeEEEEEccCCceEEEEEEec-----------------cccchhhHHHHHHHHHHHHHHhhCC-CCc-
Q 010676          331 WQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSL-----------------LDQGSQAKQSISQLEQEIALLSRFE-HEN-  391 (504)
Q Consensus       331 y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~-----------------~~~~~~~~~~~~~~~~Ei~iL~~L~-Hpn-  391 (504)
                      +.++++||-|--+-||.+-+..|+.+++|.-.+                 .....+..-......+|+..|+.|. |-+ 
T Consensus        94 ~svGnqIGVGKESDIY~v~d~~G~~~~lK~HRLGRtSFR~Vk~kRDY~r~r~~~sWlyLSRlaa~kEfafmkaL~e~gfp  173 (465)
T KOG2268|consen   94 ESVGNQIGVGKESDIYVVADEEGNPLILKLHRLGRTSFRNVKNKRDYLRKRKSGSWLYLSRLAATKEFAFMKALYERGFP  173 (465)
T ss_pred             hhhccccccccccceEEEecCCCCchhHHHHhhhhhhHHHhhhhhhhHhcCCccchhhhHHHHHHHHHHHHHHHHHcCCC
Confidence            567899999999999999999999999996322                 1111222222333457888888775 332 


Q ss_pred             eeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEE
Q 010676          392 IVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLA  471 (504)
Q Consensus       392 IV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~  471 (504)
                      +.+.++    .+..++|||++.|..|.++-+   +  ..+..+...+..-|.-|..+|+||+|..-=||||+.++.+++|
T Consensus       174 VPkpiD----~~RH~Vvmelv~g~Pl~~v~~---v--~d~~~ly~~lm~~Iv~la~~GlIHgDFNEFNimv~dd~~i~vI  244 (465)
T KOG2268|consen  174 VPKPID----HNRHCVVMELVDGYPLRQVRH---V--EDPPTLYDDLMGLIVRLANHGLIHGDFNEFNIMVKDDDKIVVI  244 (465)
T ss_pred             CCCccc----ccceeeHHHhhcccceeeeee---c--CChHHHHHHHHHHHHHHHHcCceecccchheeEEecCCCEEEe
Confidence            344444    356799999999977765432   1  1233455566666778899999999999999999999999999


Q ss_pred             ecCccc
Q 010676          472 DFGLAK  477 (504)
Q Consensus       472 DFGLA~  477 (504)
                      ||--+.
T Consensus       245 DFPQmv  250 (465)
T KOG2268|consen  245 DFPQMV  250 (465)
T ss_pred             echHhh
Confidence            997654


No 466
>PF13095 FTA2:  Kinetochore Sim4 complex subunit FTA2
Probab=97.89  E-value=0.0003  Score=68.66  Aligned_cols=131  Identities=26%  Similarity=0.296  Sum_probs=90.5

Q ss_pred             ccceeeeeeecccCc-eeEEEEEccCCceEEEEEEeccc---c-------chhh------HHHHHHHHHHHHHHhhCC--
Q 010676          328 ITYWQKGDLLGRGSF-GSVYEGISDDGFFFAVKEVSLLD---Q-------GSQA------KQSISQLEQEIALLSRFE--  388 (504)
Q Consensus       328 ~~~y~i~k~LG~G~F-G~VYka~~~~g~~vAVK~v~~~~---~-------~~~~------~~~~~~~~~Ei~iL~~L~--  388 (504)
                      ...++.++.||.|.- |.||++... |..||+|.+....   .       ....      .....-|..|.+...+|+  
T Consensus        36 ~~~I~flefLg~g~~~~~V~kv~I~-g~~YALKlf~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~PF~~ECRAfgRLke~  114 (207)
T PF13095_consen   36 GDDIEFLEFLGHGSHDGYVFKVEID-GRIYALKLFRFWDYTEPDYTRERFAGHETSLSTPAHYADPFNCECRAFGRLKEA  114 (207)
T ss_pred             CCcEeeeeecCCCCceeEEEEEEEC-CeEEEEEEeeccccCCCccccccccccccccchhhhhcChHHHHHHhhHHHHhc
Confidence            368999999999999 999999764 6699999932210   0       0000      022335667777766664  


Q ss_pred             -CCce--eEEeeeecCC------------------CeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH
Q 010676          389 -HENI--VQYYGTDKDE------------------SKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD  447 (504)
Q Consensus       389 -HpnI--V~l~~~~~~~------------------~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs  447 (504)
                       +.++  |++++|..-.                  ...-||.||++...        .+.    ..-+.+|++-|..+|+
T Consensus       115 ~~e~~~Avkc~Gyl~L~~~~q~~~~~~~~~~~~~~~~~aIVKD~v~~~~--------~~~----~~~~~~~~~dl~~~~k  182 (207)
T PF13095_consen  115 GREGLWAVKCHGYLLLTEDQQFEQLRQRGSDHRPLPIRAIVKDFVPDDP--------PLQ----IRDIPQMLRDLKILHK  182 (207)
T ss_pred             cccCceEEEeeEEEEEchHHHHHHhhcccccCCCCccEEEEEeecCCcc--------ccc----hhHHHHHHHHHHHHHH
Confidence             5566  8888875211                  12457888877643        122    2235678888889999


Q ss_pred             CCceecCCCCCcEEEcCCCcEEEEecCcc
Q 010676          448 QDVVHRDIKCANILVDANGSVKLADFGLA  476 (504)
Q Consensus       448 ~gIIHRDLKP~NILLd~~g~VKL~DFGLA  476 (504)
                      .||+-+|+++.|..     ..+|+|||.+
T Consensus       183 ~gI~~~Dv~~~ny~-----~G~lvDfs~~  206 (207)
T PF13095_consen  183 LGIVPRDVKPRNYR-----GGKLVDFSSS  206 (207)
T ss_pred             CCeeeccCcccccc-----CCEEEecccC
Confidence            99999999999986     3589999864


No 467
>KOG2270 consensus Serine/threonine protein kinase involved in cell cycle control [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning]
Probab=97.84  E-value=0.00012  Score=76.94  Aligned_cols=144  Identities=18%  Similarity=0.188  Sum_probs=99.1

Q ss_pred             eeeeecccCceeEEEEEccCCceEEEEEEecccc---------------------chhhHHHHHHHHHHHHHHhhCCCCc
Q 010676          333 KGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQ---------------------GSQAKQSISQLEQEIALLSRFEHEN  391 (504)
Q Consensus       333 i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~---------------------~~~~~~~~~~~~~Ei~iL~~L~Hpn  391 (504)
                      +-.+|..|--+.||.|...+|..+|||+++....                     ....+-..-..+.|++.|++|..-.
T Consensus       148 inGCiSTGKEANVYHat~~dG~~~AIKIYKTSILvFKDRdRYV~GEfRFRhgyck~NPRKMVk~WAEKE~RNLkRl~~aG  227 (520)
T KOG2270|consen  148 INGCISTGKEANVYHATEEDGSEFAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKHNPRKMVKTWAEKEMRNLKRLNNAG  227 (520)
T ss_pred             cccccccCccceeEeeecCCCceEEEEEEeeeEEEEechhhhccceeeeecccccCCcHHHHHHHHHHHHHHHHHHHhcC
Confidence            4456788888899999999999999999764211                     0111111233467888888876444


Q ss_pred             eeEEeeeecCCCeEEEEEEeccCCCHH-HHHHhcCCChHHHHHHHHHHHHHHHHH-HHCCceecCCCCCcEEEcCCCcEE
Q 010676          392 IVQYYGTDKDESKLYIFLELVTKGSLL-NLYQRYHLRDSQVSAYTRQILLGLKYL-HDQDVVHRDIKCANILVDANGSVK  469 (504)
Q Consensus       392 IV~l~~~~~~~~~lyLVmEy~~ggsL~-~ll~~~~l~e~~v~~i~~QIl~gL~yL-Hs~gIIHRDLKP~NILLd~~g~VK  469 (504)
                      |..---+..  ....|||+|+...... -.++...++...+..+-.|++.-+.-| |.+++||.||.--|+|+ .+|.+.
T Consensus       228 IP~PePIlL--k~hVLVM~FlGrdgw~aPkLKd~~ls~~ka~~~Y~~~v~~MR~lY~~c~LVHADLSEfN~Ly-hdG~ly  304 (520)
T KOG2270|consen  228 IPCPEPILL--KNHVLVMEFLGRDGWAAPKLKDASLSTSKARELYQQCVRIMRRLYQKCRLVHADLSEFNLLY-HDGKLY  304 (520)
T ss_pred             CCCCCceee--ecceEeeeeccCCCCcCcccccccCChHHHHHHHHHHHHHHHHHHHHhceeccchhhhhheE-ECCEEE
Confidence            322111111  2347999999754332 245555677777777878888877776 57899999999999999 688999


Q ss_pred             EEecCccccc
Q 010676          470 LADFGLAKAT  479 (504)
Q Consensus       470 L~DFGLA~~~  479 (504)
                      |||.+-+...
T Consensus       305 iIDVSQSVE~  314 (520)
T KOG2270|consen  305 IIDVSQSVEH  314 (520)
T ss_pred             EEEccccccC
Confidence            9999976543


No 468
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=97.69  E-value=1.1e-05  Score=89.07  Aligned_cols=162  Identities=24%  Similarity=0.222  Sum_probs=117.1

Q ss_pred             cccccceeeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCc-eeEEeeeecCCC
Q 010676          325 KRIITYWQKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQYYGTDKDES  403 (504)
Q Consensus       325 ~~~~~~y~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn-IV~l~~~~~~~~  403 (504)
                      +...+.|...+-+++|+++.+|+.+....+....+.+...          ....-++++|.+++||| .+.+++-+..++
T Consensus       238 kDk~kws~~fh~fvK~altknpKkRptaeklL~h~fvs~~----------l~~rl~~eLLdK~n~P~~~v~~~~d~~~E~  307 (829)
T KOG0576|consen  238 KDKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQHPFVSQT----------LSRRLAIELLDKVNNPNPVVRYLEDYDGED  307 (829)
T ss_pred             cCCccchHHHHHHHHHHhcCCCccCCChhhheeceeeccc----------hhhHHHHHHHHHccCCCCcccccccCCccc
Confidence            3445566777789999999999998755555555555321          23345789999999999 778888888889


Q ss_pred             eEEEEEEeccCC-CHHHHH--HhcCCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCcccccc
Q 010676          404 KLYIFLELVTKG-SLLNLY--QRYHLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGLAKATK  480 (504)
Q Consensus       404 ~lyLVmEy~~gg-sL~~ll--~~~~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~  480 (504)
                      ..+++|+++.++ +....+  ....+...+...+.+.-..+|++||+.-=+|+|    ||+.. ++.+++.||+....+.
T Consensus       308 ~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~r~et~~l~~l~~~~~~~~d----~~l~s-~~~~~~~~~~v~~~L~  382 (829)
T KOG0576|consen  308 YLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPLRKETRPLAELHSSYKVHRD----NILGS-EEEVKLLDFAVPPQLT  382 (829)
T ss_pred             ccchhhhhhcCCccccccCChhhHhhhhhhhhhhhhhhcccccccccccccCcc----ccccc-ccccccccccCCcccC
Confidence            999999999887 222111  112244445566677788899999988778998    77764 4789999999876554


Q ss_pred             cCC-cccccCCCcccccccccC
Q 010676          481 LND-VKSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       481 ~~~-~~s~~GT~~YmAPEVL~g  501 (504)
                      ... .....+|+.+||||+..+
T Consensus       383 ~~~~~~t~~~~~~~~~pev~~~  404 (829)
T KOG0576|consen  383 RTMKPRTAIGTPEPLAPEVIQE  404 (829)
T ss_pred             cccccccCCCCCCCCCchhhcc
Confidence            432 345569999999997654


No 469
>cd05157 ETNK_euk Ethanolamine kinase (ETNK) in eukaryotes. ETNK is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major phospholipid, phosphatidylethanolamine (PtdEtn). Unlike ChoK, ETNK shows specific activity for its substrate, and displays negligible activity towards N-methylated derivatives of Etn. The Drosophila ETNK is implicated in development and neuronal function. Mammals contain two ETNK proteins, ETNK1 and ETNK2. ETNK1 selectively increases Etn uptake and phosphorylation, as well as PtdEtn synthesis. ETNK2 is found primarily in the liver and reproductive tissues. It plays a critical role in regulating placental hemostasis to support late embryo
Probab=97.58  E-value=0.00067  Score=65.91  Aligned_cols=74  Identities=12%  Similarity=0.067  Sum_probs=46.8

Q ss_pred             eeeecccCceeEEEEEccC--CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCC-CceeEEeeeecCCCeEEEEEE
Q 010676          334 GDLLGRGSFGSVYEGISDD--GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH-ENIVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~--g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~H-pnIV~l~~~~~~~~~lyLVmE  410 (504)
                      ++.|..|-...+|++...+  +..|++|+.......      .....+|+.++..+.. ...++++..+..    .++||
T Consensus         3 i~~l~gG~tN~~~~v~~~~~~~~~~vlR~~~~~~~~------~~d~~~E~~~~~~l~~~gl~P~v~~~~~~----~~l~e   72 (235)
T cd05157           3 FKRFTGGITNKLVKVSNKEDNQDAVLVRVYGNKTEL------IIDRERELRIHKLLSKHGLAPKLYATFQN----GLIYE   72 (235)
T ss_pred             EEEcCCcccceEEEEEcCCCCCCeEEEEEccCCccc------eecHHHHHHHHHHHHhCCCCCeEEEEeCC----cEEEE
Confidence            3567778888999998764  678888865421111      1123467878877743 334555554432    47999


Q ss_pred             eccCCCH
Q 010676          411 LVTKGSL  417 (504)
Q Consensus       411 y~~ggsL  417 (504)
                      |++|..+
T Consensus        73 ~i~G~~l   79 (235)
T cd05157          73 FIPGRTL   79 (235)
T ss_pred             eeCCCcC
Confidence            9998765


No 470
>PRK10593 hypothetical protein; Provisional
Probab=97.49  E-value=0.0013  Score=67.39  Aligned_cols=76  Identities=13%  Similarity=0.109  Sum_probs=52.6

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCC---CceeEEeeeecC---CCeEEE
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEH---ENIVQYYGTDKD---ESKLYI  407 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~H---pnIV~l~~~~~~---~~~lyL  407 (504)
                      .+.||.|..+.||.....+++ +.+|..+...       ....+..|...|+.+..   -.++++++++..   .+..||
T Consensus        19 ~~~i~~G~~~~vy~~~~~~~~-~~~k~~~~~~-------~~~~~~~Ea~~L~~L~~~~~vpVP~V~~~~~~~~~~g~~~L   90 (297)
T PRK10593         19 VECISEQPYAALWALYDSQGN-PMPLMARSFS-------TPGVAQQEAWKLSMLARSGTVRMPTVYGVMTHEQSPGPDVL   90 (297)
T ss_pred             eeecCCccceeEEEEEcCCCC-EEEEEecccc-------cchHHHHHHHHHHHHccCCCCCcCcEEEEeccCCcCCCeEE
Confidence            467999999999998776664 5667543210       11356788888877752   357777776643   466899


Q ss_pred             EEEeccCCCH
Q 010676          408 FLELVTKGSL  417 (504)
Q Consensus       408 VmEy~~ggsL  417 (504)
                      |||+++|.++
T Consensus        91 VmE~i~G~~~  100 (297)
T PRK10593         91 LLERLRGVSV  100 (297)
T ss_pred             EEeccCCEec
Confidence            9999998654


No 471
>PRK09550 mtnK methylthioribose kinase; Reviewed
Probab=97.48  E-value=0.0017  Score=69.57  Aligned_cols=80  Identities=15%  Similarity=0.167  Sum_probs=52.5

Q ss_pred             eeecccCceeEEEEEccCC-ceEEEEEEecccc--chhhHHHHHHHHHHHHHHhhCC---CCceeEEeeeecCCCeEEEE
Q 010676          335 DLLGRGSFGSVYEGISDDG-FFFAVKEVSLLDQ--GSQAKQSISQLEQEIALLSRFE---HENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g-~~vAVK~v~~~~~--~~~~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~lyLV  408 (504)
                      +.||.|.+..||++...+| +.++||.......  .........+...|...|..+.   ..++++++.+..  ...++|
T Consensus        32 ~elggGn~N~VyrV~~~~g~~svIVKqa~p~~r~~g~~wpl~~eR~~~Eae~L~~l~~~~p~~VPkV~~~D~--~~~~lV  109 (401)
T PRK09550         32 REIGDGNLNLVFRVSDTEGGKSVIVKQALPYVRVVGESWPLTLDRARIEAEALKIQAKYVPDLVPKVYHYDE--ELAVTV  109 (401)
T ss_pred             eEcCCCceEEEEEEEeCCCCeEEEEEecCcccccccccccccHHHHHHHHHHHHHHHhhCCCCCCeEEEECC--CCCEEE
Confidence            5689999999999999776 5899997431111  0100122345556777776653   346777877744  457899


Q ss_pred             EEeccCCC
Q 010676          409 LELVTKGS  416 (504)
Q Consensus       409 mEy~~ggs  416 (504)
                      |||+++..
T Consensus       110 ME~L~~~~  117 (401)
T PRK09550        110 MEDLSDHK  117 (401)
T ss_pred             EecCCCcc
Confidence            99998753


No 472
>TIGR00938 thrB_alt homoserine kinase, Neisseria type. Homoserine kinase is required in the biosynthesis of threonine from aspartate.The member of this family from Pseudomonas aeruginosa was shown by direct assay and complementation to act specifically as a homoserine kinase.
Probab=97.39  E-value=0.0016  Score=66.45  Aligned_cols=137  Identities=18%  Similarity=0.159  Sum_probs=77.5

Q ss_pred             eeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCC--ceeEEeeee------cCCCe
Q 010676          333 KGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE--NIVQYYGTD------KDESK  404 (504)
Q Consensus       333 i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp--nIV~l~~~~------~~~~~  404 (504)
                      ..+.|+.|....+|+....+| .+++|+......       ...+..|+.++..|...  .+++++...      ...+.
T Consensus        26 ~i~~~~~G~~n~~y~v~t~~~-~~vLK~~~~~~~-------~~~i~~e~~~l~~L~~~g~pvp~~i~t~~g~~~~~~~g~   97 (307)
T TIGR00938        26 SLKGIAEGVENSNYLLTTDVG-RYILTLYEKRVK-------AEELPFFLALTTHLAARGLPVPKPVKSRDGRQLSTLAGK   97 (307)
T ss_pred             eccccCCccccceEEEEeCCC-cEEEEEecCCCC-------HHHHHHHHHHHHHHHHCCCCCCccccCCCCCeehhcCCe
Confidence            356677787789999876555 567786643110       12233455555555321  234443321      22456


Q ss_pred             EEEEEEeccCCCHH-----H------HH---Hh--cCCC--------hHH---H--H----------HHHHHHHHHHHHH
Q 010676          405 LYIFLELVTKGSLL-----N------LY---QR--YHLR--------DSQ---V--S----------AYTRQILLGLKYL  445 (504)
Q Consensus       405 lyLVmEy~~ggsL~-----~------ll---~~--~~l~--------e~~---v--~----------~i~~QIl~gL~yL  445 (504)
                      .|++|+|++|..+.     .      .+   ..  .++.        ...   .  .          .....+...++++
T Consensus        98 ~~~l~e~i~G~~~~~~~~~~~~~~G~~LA~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~l~~~~~~~l~~~~~~l  177 (307)
T TIGR00938        98 PACLVEFLQGLSVGRPTAMHCRPVGEVLAWMHLAGAHFPENRKNSLRLEAWHILAEKCFEAAPQLEAHMGAELDKELDYL  177 (307)
T ss_pred             EEEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHhhhccCCCCCCCCCChHHHHHHHHhhhhcccccCHHHHHHHHHHHHHH
Confidence            78999999985431     1      11   10  0110        000   0  0          0011122345555


Q ss_pred             HH-------CCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          446 HD-------QDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       446 Hs-------~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      ..       .+++|+|+++.||+++.++.+.|+||+.+.
T Consensus       178 ~~~~~~~~~~~l~HgD~~~~Nvl~~~~~~~~vIDfd~~~  216 (307)
T TIGR00938       178 DKFWPRDLPRGVIHADLFPDNVLFDGDSVKGVIDFYFAC  216 (307)
T ss_pred             HhhhhhcCCCccCCCCCCcCcEEEECCceEEEeeccccc
Confidence            32       579999999999999988877899999874


No 473
>TIGR02721 ycfN_thiK thiamine kinase. Members of this family are the ycfN gene product of Escherichia coli, now identified as the salvage enzyme thiamine kinase (thiK), and additional proteobacterial homologs taken to be orthologs with equivalent function.
Probab=97.36  E-value=0.00079  Score=66.70  Aligned_cols=131  Identities=18%  Similarity=0.239  Sum_probs=73.2

Q ss_pred             ecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCce-eEEeeeecCCCeEEEEEEeccCC
Q 010676          337 LGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI-VQYYGTDKDESKLYIFLELVTKG  415 (504)
Q Consensus       337 LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~lyLVmEy~~gg  415 (504)
                      +..|-...+|+.. .++..+++|.........    . ....+|..+++.+..-.+ .+++..+.    -++||||++|.
T Consensus         4 ~~~G~tn~~y~~~-~~~~~~vlR~~~~~~~~~----~-~~r~~E~~~l~~l~~~g~~P~~i~~~~----~~~v~e~i~G~   73 (256)
T TIGR02721         4 LSGGLTNRSWRIE-HPGISFVWRPQSPVCKAL----G-VDRQREYQILQALSALGLAPKPILVNE----HWLLVEWLEGE   73 (256)
T ss_pred             CCCcCcCCeEEEE-eCCccEEEeeCCcccccc----c-CcHHHHHHHHHHHHhcCCCCceEEEeC----CEEEEEeccCc
Confidence            4567778899886 456677788543211100    0 123577888877753322 34444432    26899999986


Q ss_pred             CHHH--------------HHHh---cC-----CCh-HHHHHHHHHH---------HHHHHHHHH--------CCceecCC
Q 010676          416 SLLN--------------LYQR---YH-----LRD-SQVSAYTRQI---------LLGLKYLHD--------QDVVHRDI  455 (504)
Q Consensus       416 sL~~--------------ll~~---~~-----l~e-~~v~~i~~QI---------l~gL~yLHs--------~gIIHRDL  455 (504)
                      .+..              .+.+   ..     +.. ..+..+..++         ...+..+-.        ..++|+|+
T Consensus        74 ~~~~~~~~~~~~~~~la~~l~~lH~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~H~Dl  153 (256)
T TIGR02721        74 VITLDQFVALDLLLELAALLHQLHSQPRFGYPLSLKARIAHYWLQIDPARRTPEWLRLYKQFRSAPEPAPLPLAPLHMDV  153 (256)
T ss_pred             ccccccccCchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHHhcccccCChHHHHHHHHHHhccCCCCCCCeeecCCC
Confidence            5431              1111   11     111 1122222222         111222221        24899999


Q ss_pred             CCCcEEEcCCCcEEEEecCcccc
Q 010676          456 KCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       456 KP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      .|.|||++.++ +.|+||..|..
T Consensus       154 ~~~Nil~~~~~-~~lIDwE~a~~  175 (256)
T TIGR02721       154 HAYNLVVTPQG-LKLIDWEYASD  175 (256)
T ss_pred             CcCcEEEeCCC-CEEEeccccCc
Confidence            99999999877 78999998753


No 474
>PRK05231 homoserine kinase; Provisional
Probab=97.21  E-value=0.0078  Score=61.44  Aligned_cols=30  Identities=27%  Similarity=0.411  Sum_probs=25.9

Q ss_pred             CCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          448 QDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       448 ~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      .++||+|+++.|||++.+...-|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~~~~~~iIDf~~~~  216 (319)
T PRK05231        187 RGVIHADLFRDNVLFEGDRLSGFIDFYFAC  216 (319)
T ss_pred             cccCCCCCCCCcEEEECCceEEEEeccccc
Confidence            379999999999999866556899999875


No 475
>cd05153 HomoserineK_II Homoserine Kinase, type II. Homoserine kinase is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of unusual homoserine kinases, from a subset of bacteria, which have a PK fold. These proteins do not bear any similarity to the GHMP family homoserine kinases present in most bacteria and eukaryotes. Homoserine kinase catalyzes the transfer of the gamma-phosphoryl group from ATP to L-homoserine producing L-homoserine phosphate, an intermediate in the production of the amino acids threonine, methionine, and isoleucine.
Probab=97.18  E-value=0.0037  Score=62.95  Aligned_cols=135  Identities=15%  Similarity=0.120  Sum_probs=78.3

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCC--ceeEEeee------ecCCCeE
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHE--NIVQYYGT------DKDESKL  405 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hp--nIV~l~~~------~~~~~~l  405 (504)
                      .+.|..|....+|+....+ ..+++|+...  .   .   ...+..|+.++..+.+.  .+++++..      ....+..
T Consensus        19 i~~i~~G~~n~~y~v~~~~-~~~vLr~~~~--~---~---~~~~~~e~~~l~~L~~~g~~vp~~i~~~~g~~~~~~~~~~   89 (296)
T cd05153          19 FEGISAGIENTNYFVTTDS-GRYVLTLFEK--V---S---AEELPFFLALLDHLAERGLPVPRPIADRDGEYLSELAGKP   89 (296)
T ss_pred             eecccCccccceEEEEeCC-CcEEEEEcCC--C---C---hHhccHHHHHHHHHHHCCCCCCccccCCCCcEeeeeCCce
Confidence            5567878778999986544 4688887642  1   1   12355666666666422  24444432      1234567


Q ss_pred             EEEEEeccCCCHHH----H-------H---Hh--cCCCh--------HHHHH------------HHHHHHHHHHHHHH--
Q 010676          406 YIFLELVTKGSLLN----L-------Y---QR--YHLRD--------SQVSA------------YTRQILLGLKYLHD--  447 (504)
Q Consensus       406 yLVmEy~~ggsL~~----l-------l---~~--~~l~e--------~~v~~------------i~~QIl~gL~yLHs--  447 (504)
                      +++++|++|..+..    .       +   ..  ..+..        .....            ....+...+.++..  
T Consensus        90 ~~l~~~i~G~~~~~~~~~~~~~lg~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~  169 (296)
T cd05153          90 AALVEFLAGEHLTRPTAAHCRQIGEALARLHLAAQSFPGERNNLRGLAWIRELGKDLLPLLSAEDRALLADELARQDAFD  169 (296)
T ss_pred             EEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCccCCCcCCcHHHHHHHHHhccccCHHHHHHHHHHHHHHHhhh
Confidence            89999999875421    1       1   00  00100        00000            01112233444443  


Q ss_pred             -----CCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          448 -----QDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       448 -----~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                           .+++|+|+.|.|||++.++.+.|+||+.+.
T Consensus       170 ~~~~~~~l~HgD~~~~Nil~~~~~~~~iIDfe~a~  204 (296)
T cd05153         170 PSDLPRGVIHADLFRDNVLFDGDELSGVIDFYFAC  204 (296)
T ss_pred             hhcCCCcCCccCcCcccEEEeCCceEEEeehhhhc
Confidence                 469999999999999987777899999865


No 476
>cd05156 ChoK_euk Choline Kinase (ChoK) in eukaryotes. The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC) and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. ChoK plays an important role in cell signaling pathways and the regulation of cell growth. Along with PCho, it is involved in malignant transformation through Ras oncogenes in various human cancer
Probab=97.14  E-value=0.0028  Score=64.14  Aligned_cols=73  Identities=16%  Similarity=0.166  Sum_probs=44.5

Q ss_pred             eeecccCceeEEEEEccC-------CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCc-eeEEeeeecCCCeEE
Q 010676          335 DLLGRGSFGSVYEGISDD-------GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQYYGTDKDESKLY  406 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~-------g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn-IV~l~~~~~~~~~ly  406 (504)
                      +.|..|-...||+....+       +..|++|+.......      .....+|+.++..+...+ ..++++++..    .
T Consensus         4 ~~l~gGltN~~y~v~~~~~~~~~~~~~~~vlRi~~~~~~~------~~~r~~E~~~~~~l~~~g~~P~~~~~~~~----~   73 (302)
T cd05156           4 SKISGGLTNAVYKVSLPDEDALSDEPRKVLLRVYGQSVEL------LIDRERELVVFARLSERNLGPKLYGIFPN----G   73 (302)
T ss_pred             EEecCcccceeEEEEcCCcccccCCCCeEEEEEecCCCcc------eechHHHHHHHHHHHhCCCCCceEEEeCC----C
Confidence            446666667899887654       578888876432111      123457777777765322 3455555532    3


Q ss_pred             EEEEeccCCCH
Q 010676          407 IFLELVTKGSL  417 (504)
Q Consensus       407 LVmEy~~ggsL  417 (504)
                      +|++|++|..+
T Consensus        74 ~v~e~i~G~~l   84 (302)
T cd05156          74 RIEEFIPSRTL   84 (302)
T ss_pred             chhheeCCCcC
Confidence            58999988765


No 477
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=96.95  E-value=0.0049  Score=65.99  Aligned_cols=159  Identities=18%  Similarity=0.154  Sum_probs=102.1

Q ss_pred             eeeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC-CCCceeEEee------eecCCC-
Q 010676          332 QKGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF-EHENIVQYYG------TDKDES-  403 (504)
Q Consensus       332 ~i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L-~HpnIV~l~~------~~~~~~-  403 (504)
                      ..++.||+|+-+.+|-.-.- + ..+-|++.........        +-+..|... .||-+-.-+.      +..... 
T Consensus        14 ~~gr~LgqGgea~ly~l~e~-~-d~VAKIYh~Pppa~~a--------qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~   83 (637)
T COG4248          14 PPGRPLGQGGEADLYTLGEV-R-DQVAKIYHAPPPAAQA--------QKVAELAATPDAPLLNYRVAWPQATLHGGRRGK   83 (637)
T ss_pred             CCCccccCCccceeeecchh-h-chhheeecCCCchHHH--------HHHHHhccCCCCcchhhhhcccHHHhhCCCccc
Confidence            34678999999999965331 1 1234655433222111        122334333 3554332111      122222 


Q ss_pred             eEEEEEEeccCC-CHHHHHHh------c-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEecCc
Q 010676          404 KLYIFLELVTKG-SLLNLYQR------Y-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLADFGL  475 (504)
Q Consensus       404 ~lyLVmEy~~gg-sL~~ll~~------~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~DFGL  475 (504)
                      .+-++|..+.+. -...++..      + .+.+.-+++.++.++.+..-||..|.+-+|+.++|||+..++.|.|+|-..
T Consensus        84 ~iGflmP~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDs  163 (637)
T COG4248          84 VIGFLMPKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDS  163 (637)
T ss_pred             eeEEecccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccc
Confidence            267888888765 23344421      1 267788899999999999999999999999999999999999999998654


Q ss_pred             cccccc-CCcccccCCCccccccccc
Q 010676          476 AKATKL-NDVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       476 A~~~~~-~~~~s~~GT~~YmAPEVL~  500 (504)
                      ...... ......+|...|.+||.=.
T Consensus       164 fqi~~ng~~~~cpVg~~eftPPElQ~  189 (637)
T COG4248         164 FQINANGTLHLCPVGVSEFTPPELQT  189 (637)
T ss_pred             eeeccCCceEecccCccccCCHHHhc
Confidence            333222 2244556999999999755


No 478
>cd05152 MPH2' Macrolide 2'-Phosphotransferase (MPH2'). MPH2' is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). MPH2' catalyzes the transfer of the gamma-phosphoryl group from ATP to the 2'-hydroxyl of macrolide antibiotics such as erythromycin, clarithromycin, and azithromycin, among others. Macrolides penetrate the bacterial cell and bind to ribosomes, where it interrupts protein elongation, leading ultimately to the demise of the bacterium. Phosphorylation of macrolides leads to their inactivation. Based on substrate specificity and amino acid sequence, MPH2' is divided into types I and II, encoded by mphA and mphB genes, respectively. MPH2'I inactivates 14-membered ring macrolides while MPH2'II inactivates both 14- and 16-membered ring macrolides. Enzymatic inactivation of macrolides has been reported 
Probab=96.89  E-value=0.0069  Score=61.50  Aligned_cols=30  Identities=33%  Similarity=0.495  Sum_probs=25.2

Q ss_pred             CceecCCCCCcEEEcCCCc-EEEEecCcccc
Q 010676          449 DVVHRDIKCANILVDANGS-VKLADFGLAKA  478 (504)
Q Consensus       449 gIIHRDLKP~NILLd~~g~-VKL~DFGLA~~  478 (504)
                      .++|+|+++.|||++.++. .-|+||+.+..
T Consensus       186 ~lvHGD~~~~Nilv~~~~~~~gviDWe~a~i  216 (276)
T cd05152         186 VLVHGDLHPGHILIDEDARVTGLIDWTEAKV  216 (276)
T ss_pred             eeEeCCCCCCcEEEeCCCCEEEEECcHhccc
Confidence            4899999999999987565 46999998764


No 479
>TIGR01767 MTRK 5-methylthioribose kinase. This enzyme is involved in the methionine salvage pathway in certain bacteria.
Probab=96.54  E-value=0.012  Score=62.34  Aligned_cols=78  Identities=15%  Similarity=0.157  Sum_probs=47.0

Q ss_pred             eecccCceeEEEEEccCC-ceEEEEEEecccc--chhhHHHHHHHHHHHHHHhhCC--CC-ceeEEeeeecCCCeEEEEE
Q 010676          336 LLGRGSFGSVYEGISDDG-FFFAVKEVSLLDQ--GSQAKQSISQLEQEIALLSRFE--HE-NIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       336 ~LG~G~FG~VYka~~~~g-~~vAVK~v~~~~~--~~~~~~~~~~~~~Ei~iL~~L~--Hp-nIV~l~~~~~~~~~lyLVm  409 (504)
                      .||-|....||++.+.+| ..++||.-.....  .........+..-|...|+...  .| .++++|.+  +.....+||
T Consensus         2 EigdGnlN~VfrV~~~~g~~svIVKQAlp~vRv~g~~wpl~~~R~~~E~~~L~~~~~~~P~~vP~vy~~--D~e~~~~vM   79 (370)
T TIGR01767         2 EVGDGNLNLVFHVYDQEGDRAAIVKQALPYVRVVGESWPLTLDRARIESSALIRQGEHVPHLVPRIFHF--DTEMAVTVM   79 (370)
T ss_pred             cCCCCceEEEEEEEcCCCCeeEEEEEcCHHHhhcCCCCCCCccHHHHHHHHHHHhhccCccccCeEEEE--ccccceehH
Confidence            478999999999998654 5799997432111  1111222334445666665543  34 45566654  334457899


Q ss_pred             EeccCC
Q 010676          410 ELVTKG  415 (504)
Q Consensus       410 Ey~~gg  415 (504)
                      |+++..
T Consensus        80 EdL~~~   85 (370)
T TIGR01767        80 EDLSHH   85 (370)
T ss_pred             hhCccc
Confidence            999654


No 480
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=96.52  E-value=0.0011  Score=74.14  Aligned_cols=65  Identities=31%  Similarity=0.411  Sum_probs=50.6

Q ss_pred             HHHHHHHHHHH-CCceecCCCCCcEEEcCCCcEEEEecCcccccccCC------c-----ccccCCCcccccccccC
Q 010676          437 QILLGLKYLHD-QDVVHRDIKCANILVDANGSVKLADFGLAKATKLND------V-----KSCRGTAFWMAPEVCSN  501 (504)
Q Consensus       437 QIl~gL~yLHs-~gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~~------~-----~s~~GT~~YmAPEVL~g  501 (504)
                      ++..||.|+|. .++||+.|.|++|.++.+|.+||+.|+++.......      .     -...-...|.|||++.+
T Consensus       107 ~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~~  183 (700)
T KOG2137|consen  107 NVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLLG  183 (700)
T ss_pred             cccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhcc
Confidence            34489999996 479999999999999999999999999976543311      1     11235677999999865


No 481
>TIGR02906 spore_CotS spore coat protein, CotS family. Members of this family include the spore coat proteins CotS and YtaA from Bacillus subtilis and, from other endospore-forming bacteria, homologs that are more closely related to these two than to the spore coat proteins YutH and YsxE. The CotS family is more broadly distributed than YutH or YsxE, but still is not universal among spore-formers.
Probab=96.46  E-value=0.058  Score=54.47  Aligned_cols=29  Identities=28%  Similarity=0.468  Sum_probs=25.5

Q ss_pred             CCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          448 QDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       448 ~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      .+++|+|+++.|||++. +.+.|+||+.+.
T Consensus       187 ~~liHgD~~~~Nil~~~-~~i~lIDfd~~~  215 (313)
T TIGR02906       187 RGFCHQDYAYHNILLKD-NEVYVIDFDYCT  215 (313)
T ss_pred             CceEcCCCCcccEEEeC-CcEEEEECcccc
Confidence            47899999999999987 678999999764


No 482
>TIGR02904 spore_ysxE spore coat protein YsxE. Members of this family are homologs of the Bacillus subtilis spore coat protein CotS. Members of this family, designated YsxE, are found only in the family Bacillaceae, from among the endospore-forming members of the Firmicutes branch of the Bacteria. As a rule, the ysxE gene is found immediately downstream of spoVID, a gene necessary for spore coat assembly. The protein has been shown to be part of the spore coat.
Probab=96.42  E-value=0.039  Score=56.47  Aligned_cols=30  Identities=20%  Similarity=0.249  Sum_probs=27.5

Q ss_pred             CceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          449 DVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       449 gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      +++|+|+.+.|||++.++.+.|+||..+..
T Consensus       197 ~lcHgD~~~~Nvl~~~~~~~~iIDfd~~~~  226 (309)
T TIGR02904       197 VLVHGKLSLSHFLYDETRGGYFINFEKASF  226 (309)
T ss_pred             eeeCCCCcHHhEEEcCCCCEEEEEhhhccc
Confidence            699999999999999999999999998753


No 483
>PLN02756 S-methyl-5-thioribose kinase
Probab=96.28  E-value=0.061  Score=57.95  Aligned_cols=78  Identities=17%  Similarity=0.169  Sum_probs=48.0

Q ss_pred             eeeecccCceeEEEEEccCCceEEEEEEecccc--chhhHHHHHHHHHHHHHHhhCC---CCceeEEeeeecCCCeEEEE
Q 010676          334 GDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQ--GSQAKQSISQLEQEIALLSRFE---HENIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~--~~~~~~~~~~~~~Ei~iL~~L~---HpnIV~l~~~~~~~~~lyLV  408 (504)
                      .+.||.|....||+..+. +..++||.-.....  .........+-..|...|+.+.   ..+++++|.++.+  ..+++
T Consensus        37 ~~eiggGn~N~VyrV~~~-~~svVVKqa~p~~r~vga~wpl~~~R~~~Ea~aL~~~~~~~p~~VPkVy~~ded--~~vlv  113 (418)
T PLN02756         37 IKEVGDGNLNFVYIVVSS-SGSFVIKQALPYIRCIGESWPMTKERAYFEATALREHGRLCPDHVPEVYHFDRT--MALIG  113 (418)
T ss_pred             EEEcCCCceeeEEEEEcC-CccEEEEeCCccccCCCccccCCccHHHHHHHHHHHhhhcCCCCCCeEEEECCC--CCEEE
Confidence            466899999999998875 45688886531111  0000011223334455555443   3578888888774  45788


Q ss_pred             EEeccC
Q 010676          409 LELVTK  414 (504)
Q Consensus       409 mEy~~g  414 (504)
                      ||++++
T Consensus       114 ME~L~~  119 (418)
T PLN02756        114 MRYLEP  119 (418)
T ss_pred             EeecCC
Confidence            999977


No 484
>PLN02421 phosphotransferase, alcohol group as acceptor/kinase
Probab=96.19  E-value=0.028  Score=58.41  Aligned_cols=29  Identities=21%  Similarity=0.503  Sum_probs=25.2

Q ss_pred             ceecCCCCCcEEEcC-CCcEEEEecCcccc
Q 010676          450 VVHRDIKCANILVDA-NGSVKLADFGLAKA  478 (504)
Q Consensus       450 IIHRDLKP~NILLd~-~g~VKL~DFGLA~~  478 (504)
                      ++|.|+.+.|||++. ++.++|+||..|..
T Consensus       184 ~CHnDl~~~NiL~~~~~~~l~lID~EYag~  213 (330)
T PLN02421        184 FAHNDLLSGNLMLNEDEGKLYFIDFEYGSY  213 (330)
T ss_pred             EEECCCCcccEEEeCCCCcEEEEcccccCC
Confidence            789999999999975 57899999998753


No 485
>PLN02236 choline kinase
Probab=96.17  E-value=0.049  Score=57.02  Aligned_cols=135  Identities=13%  Similarity=0.118  Sum_probs=75.8

Q ss_pred             eeeecccCceeEEEEEcc-----CCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCce-eEEeeeecCCCeEEE
Q 010676          334 GDLLGRGSFGSVYEGISD-----DGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENI-VQYYGTDKDESKLYI  407 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~-----~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnI-V~l~~~~~~~~~lyL  407 (504)
                      ...|-.|-.-.+|++...     .+..|++|+......     ..+ .-.+|+.+++.+..-++ .++++.+...    .
T Consensus        41 i~~l~gGlTN~~y~v~~~~~~~~~~~~~v~Ri~g~~t~-----~~i-dR~~E~~~~~~l~~~gl~P~~~~~~~~g----~  110 (344)
T PLN02236         41 VIPLKGAMTNEVFQIKWPTKEGNLGRKVLVRIYGEGVE-----LFF-DRDDEIRTFECMSRHGQGPRLLGRFPNG----R  110 (344)
T ss_pred             EEEcCCcccceeEEEEeCCCCCCCCCeEEEEEccCCCC-----eee-chHHHHHHHHHHHHcCCCCceEEEECCc----e
Confidence            344555777889988642     236788886643211     111 12567777777753333 3556665432    5


Q ss_pred             EEEeccCCCHHH--------------HHHh---cCC-------ChHHHHHHHHHH-----------------HHHHHHH-
Q 010676          408 FLELVTKGSLLN--------------LYQR---YHL-------RDSQVSAYTRQI-----------------LLGLKYL-  445 (504)
Q Consensus       408 VmEy~~ggsL~~--------------ll~~---~~l-------~e~~v~~i~~QI-----------------l~gL~yL-  445 (504)
                      |++|+++.+|..              .+.+   ..+       ...++..+..++                 ...+..| 
T Consensus       111 v~efi~g~~l~~~~l~~~~~~~~ia~~L~~lH~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~L~  190 (344)
T PLN02236        111 VEEFIHARTLSAADLRDPEISALIAAKLREFHSLDMPGPKNVLLWDRLRNWLKEAKNLCSPEEAKEFRLDSLEDEINLLE  190 (344)
T ss_pred             EEEeeCCCCCCHHHcCChHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhhcCcchhhhcCHHHHHHHHHHHH
Confidence            799998766531              1111   011       112233332221                 1111112 


Q ss_pred             ---H----HCCceecCCCCCcEEEcC-CCcEEEEecCcccc
Q 010676          446 ---H----DQDVVHRDIKCANILVDA-NGSVKLADFGLAKA  478 (504)
Q Consensus       446 ---H----s~gIIHRDLKP~NILLd~-~g~VKL~DFGLA~~  478 (504)
                         .    ...++|+|+++.|||++. ++.++|+||..+..
T Consensus       191 ~~~~~~~~~~~~cH~Dl~~~Nil~~~~~~~~~lID~Eya~~  231 (344)
T PLN02236        191 KELSGDDQEIGFCHNDLQYGNIMIDEETRAITIIDYEYASY  231 (344)
T ss_pred             HHhcccCCCceEEeCCCCcCcEEEeCCCCcEEEEeehhccc
Confidence               1    225899999999999986 47899999998754


No 486
>PRK12396 5-methylribose kinase; Reviewed
Probab=95.88  E-value=0.027  Score=60.42  Aligned_cols=80  Identities=16%  Similarity=0.156  Sum_probs=49.8

Q ss_pred             eeeecccCceeEEEEEccC-CceEEEEEEecccc-chhhHHHHHHHHHHHHHHhhCC--CC-ceeEEeeeecCCCeEEEE
Q 010676          334 GDLLGRGSFGSVYEGISDD-GFFFAVKEVSLLDQ-GSQAKQSISQLEQEIALLSRFE--HE-NIVQYYGTDKDESKLYIF  408 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~-g~~vAVK~v~~~~~-~~~~~~~~~~~~~Ei~iL~~L~--Hp-nIV~l~~~~~~~~~lyLV  408 (504)
                      .+.||-|.-.-||++.+.+ +..++||.-..... .....-...+..-|...|+...  .| +++++|.+  +.....+|
T Consensus        34 ~~eigdGnlN~VfrV~~~~~~~svIVKQAlp~vRv~~swpL~~~R~~~E~~aL~~~~~~~P~~VP~vy~~--D~e~~~~v  111 (409)
T PRK12396         34 CKEIGDGNLNYVFRVWDEQKNISVIVKQAGDTARISDEFKLSTNRIRIESDVLQLEEELAPGLVPKVYLF--DSVMNCCV  111 (409)
T ss_pred             eeEcCCCceEEEEEEeeCCCCceEEEEeccHhhccCCCCCCChHHHHHHHHHHHHHHhhCCCcCCeEEEE--CcHHhhHH
Confidence            4568999999999999743 56789987432111 1111233445556667776553  34 56666655  34456789


Q ss_pred             EEeccCC
Q 010676          409 LELVTKG  415 (504)
Q Consensus       409 mEy~~gg  415 (504)
                      ||+++..
T Consensus       112 MEdL~~~  118 (409)
T PRK12396        112 MEDLSDH  118 (409)
T ss_pred             HHhCccc
Confidence            9998653


No 487
>PRK06148 hypothetical protein; Provisional
Probab=95.74  E-value=0.089  Score=62.81  Aligned_cols=31  Identities=45%  Similarity=0.622  Sum_probs=26.1

Q ss_pred             CCceecCCCCCcEEEcCCC--cEE-EEecCcccc
Q 010676          448 QDVVHRDIKCANILVDANG--SVK-LADFGLAKA  478 (504)
Q Consensus       448 ~gIIHRDLKP~NILLd~~g--~VK-L~DFGLA~~  478 (504)
                      +++||.|+.+.|||++.++  .+. |+|||.+..
T Consensus       203 ~~vIHgDln~~NiLv~~~~~~~isGiIDFgDa~~  236 (1013)
T PRK06148        203 AQVIHNDANDYNILVDADDGERISGLIDFGDAVH  236 (1013)
T ss_pred             cceECCCCCcccEEEcCCCCcceEEEEECccccc
Confidence            4799999999999998775  565 999998753


No 488
>COG3173 Predicted aminoglycoside phosphotransferase [General function prediction only]
Probab=95.72  E-value=0.11  Score=54.30  Aligned_cols=30  Identities=27%  Similarity=0.457  Sum_probs=27.2

Q ss_pred             CceecCCCCCcEEEcCCCcEEEEecCcccc
Q 010676          449 DVVHRDIKCANILVDANGSVKLADFGLAKA  478 (504)
Q Consensus       449 gIIHRDLKP~NILLd~~g~VKL~DFGLA~~  478 (504)
                      .++|+|+++.||+|+.++-+-|+||+++..
T Consensus       199 ~lvHGD~~~gNlii~~~~~~gVlDwe~~~l  228 (321)
T COG3173         199 VLVHGDYRPGNLIIDPGRPTGVLDWELATL  228 (321)
T ss_pred             eeeeCCcccCCEEEeCCCeeEEEecccccc
Confidence            489999999999999988899999998764


No 489
>PF03881 Fructosamin_kin:  Fructosamine kinase;  InterPro: IPR016477 Ketosamines derive from a non-enzymatic reaction between a sugar and a protein []. Ketosamine-3-kinases (KT3K), of which fructosamine-3-kinase (FN3K) is the best-known example, catalyse the phosphorylation of the ketosamine moiety of glycated proteins. The instability of a phosphorylated ketosamine leads to its degradation, and KT3K is thus thought to be involved in protein repair []. The function of the prokaryotic members of this group has not been established. However, several lines of evidence indicate that they may function as fructosamine-3-kinases (FN3K). First, they are similar to characterised FN3K from mouse and human. Second, the Escherichia coli members are found in close proximity on the genome to fructose-6-phosphate kinase (PfkB). Last, FN3K activity has been found in a Anacystis montana (Gloeocapsa montana Kutzing 1843) [], indicating such activity-directly demonstrated in eukaryotes-is nonetheless not confined to eukaryotes. This family includes eukaryotic fructosamine-3-kinase enzymes [] which may initiate a process leading to the deglycation of fructoselysine and of glycated proteins and in the phosphorylation of 1-deoxy-1-morpholinofructose, fructoselysine, fructoseglycine, fructose and glycated lysozyme. The family also includes bacterial members that have not been characterised but probably have a similar or identical function. For additional information please see [].; PDB: 3JR1_B 3F7W_A.
Probab=95.56  E-value=0.11  Score=53.34  Aligned_cols=74  Identities=18%  Similarity=0.184  Sum_probs=44.4

Q ss_pred             eeeeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC---CCCceeEEeeeecCCCeEEEEE
Q 010676          333 KGDLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---EHENIVQYYGTDKDESKLYIFL  409 (504)
Q Consensus       333 i~k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~~~~lyLVm  409 (504)
                      ..+.|+.|....+|+.. .++..+.||.-....        ...|..|..-|+.|   ..-.+++++.+....+.-||||
T Consensus        21 ~~~~v~GG~i~~a~~~~-~~~~~~FvK~~~~~~--------~~~f~~Ea~gL~~L~~~~~~~vP~vi~~G~~~~~~fLll   91 (288)
T PF03881_consen   21 SIEPVSGGDINEAYRLD-TDGGSYFVKVNSESG--------RDMFEGEAEGLKALAEANPIRVPKVIAWGEYDDDAFLLL   91 (288)
T ss_dssp             EEEEE--SSSSEEEEEE-TTS-EEEEEEEEGGG--------CCHHHHHHHHHHHHCHTTTSBS--EEEEEE-SSCCEEEE
T ss_pred             eeEecCCCChhheEEEE-CCCccEEEEecChhh--------HHHHHHHHHHHHHHHhcCCCCCCeEEEEEeecCCceEEE
Confidence            35668889999999987 567788888665211        12355666666666   3456788888887777779999


Q ss_pred             EeccCC
Q 010676          410 ELVTKG  415 (504)
Q Consensus       410 Ey~~gg  415 (504)
                      ||++.+
T Consensus        92 e~l~~~   97 (288)
T PF03881_consen   92 EFLEMG   97 (288)
T ss_dssp             E-----
T ss_pred             EeecCC
Confidence            999876


No 490
>COG5072 ALK1 Serine/threonine kinase of the haspin family [Cell division and chromosome partitioning]
Probab=95.47  E-value=0.039  Score=58.55  Aligned_cols=74  Identities=23%  Similarity=0.353  Sum_probs=55.3

Q ss_pred             CCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHC-CceecCCCCCcEEEcCCCcEEEEecCccccc
Q 010676          401 DESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHDQ-DVVHRDIKCANILVDANGSVKLADFGLAKAT  479 (504)
Q Consensus       401 ~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs~-gIIHRDLKP~NILLd~~g~VKL~DFGLA~~~  479 (504)
                      +..+.|++|++- |+.|..+   ..-..+++..++++.+..+.-+.++ .+-|||+.-.||||+ +|+|.|+||-+++..
T Consensus       297 e~~y~yl~~kdh-gt~is~i---k~~~~~e~lsff~s~~sil~~lekkf~fehrnlt~~niLId-~GnvtLIDfklsRl~  371 (488)
T COG5072         297 ETLYLYLHFKDH-GTPISII---KADRSEEELSFFWSCISILDILEKKFPFEHRNLTLDNILID-EGNVTLIDFKLSRLS  371 (488)
T ss_pred             CceEEEEEEecC-Cceeeee---ecccHHHHHHHHHHHHHHHhhhhhcCCcccccccccceeee-cCceEEEEeeeeecc
Confidence            345577778765 3333221   2245677888999888877766654 588999999999999 999999999999853


No 491
>PF02958 EcKinase:  Ecdysteroid kinase;  InterPro: IPR004119 This family includes proteins of unknown function. All known members of this group are proteins from drosophila and Caenorhabditis elegans.
Probab=95.35  E-value=0.057  Score=54.41  Aligned_cols=29  Identities=41%  Similarity=0.578  Sum_probs=24.9

Q ss_pred             ceecCCCCCcEEEcCC--C---cEEEEecCcccc
Q 010676          450 VVHRDIKCANILVDAN--G---SVKLADFGLAKA  478 (504)
Q Consensus       450 IIHRDLKP~NILLd~~--g---~VKL~DFGLA~~  478 (504)
                      |+|+|++..|||+..+  |   .++++||-+++.
T Consensus       217 l~HGD~w~nNilf~~~~~g~~~~~~liDfQ~~~~  250 (294)
T PF02958_consen  217 LCHGDFWTNNILFKYDDDGKPIDVVLIDFQLARY  250 (294)
T ss_pred             EEcCccCHHhEeEccccccccccceeeccccccC
Confidence            8999999999999765  3   589999998764


No 492
>PRK11768 serine/threonine protein kinase; Provisional
Probab=95.17  E-value=0.5  Score=48.99  Aligned_cols=28  Identities=25%  Similarity=0.253  Sum_probs=24.0

Q ss_pred             CCceecCCCCCcEEEcCCCcEEEEecCccc
Q 010676          448 QDVVHRDIKCANILVDANGSVKLADFGLAK  477 (504)
Q Consensus       448 ~gIIHRDLKP~NILLd~~g~VKL~DFGLA~  477 (504)
                      .++||+|+.+.|||++ + .+.|+||+.+.
T Consensus       196 ~~liHgD~h~~NvL~~-d-~~~iIDFDd~~  223 (325)
T PRK11768        196 LLRLHGDCHPGNILWR-D-GPHFVDLDDAR  223 (325)
T ss_pred             ccceecCCCchhcccc-C-CcEEEeCCCCC
Confidence            3689999999999995 4 57899999875


No 493
>PTZ00384 choline kinase; Provisional
Probab=94.44  E-value=0.28  Score=52.31  Aligned_cols=79  Identities=15%  Similarity=0.203  Sum_probs=43.7

Q ss_pred             eeeecccCceeEEEEEccCC--ceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCc-eeEEeeeecCCCeEEEEEE
Q 010676          334 GDLLGRGSFGSVYEGISDDG--FFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHEN-IVQYYGTDKDESKLYIFLE  410 (504)
Q Consensus       334 ~k~LG~G~FG~VYka~~~~g--~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~Hpn-IV~l~~~~~~~~~lyLVmE  410 (504)
                      .+.|..|-...+|++...++  ..+.+|.+.....+.. ....-.-.+|+.+++.+...+ -.++++.+..    +++.|
T Consensus        55 i~~l~gGLTN~l~~v~~~~~~~~~~~~k~Vl~R~~g~~-~~l~IdR~~E~~i~~~Ls~~glgP~l~~~f~~----g~l~e  129 (383)
T PTZ00384         55 IKKMNNGITNQVYQATLVDGDKDRYPIKSVCIKKSSTY-NSLVIDNDLQYNIAKLLGDNNFGPKIIGRFGD----FTIQE  129 (383)
T ss_pred             EEEeCCcccceEEEEEecCCCCCccccceEEEEeccCC-CceEeccHHHHHHHHHHHhCCCCCeEEEecCC----EEEEE
Confidence            44565588889999875332  2332232111110111 111112346888888886544 4556666643    69999


Q ss_pred             eccCCCH
Q 010676          411 LVTKGSL  417 (504)
Q Consensus       411 y~~ggsL  417 (504)
                      |++|..|
T Consensus       130 fIeGr~l  136 (383)
T PTZ00384        130 WVEGNTM  136 (383)
T ss_pred             EeccccC
Confidence            9998765


No 494
>COG3001 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.19  E-value=0.27  Score=49.48  Aligned_cols=68  Identities=21%  Similarity=0.256  Sum_probs=44.6

Q ss_pred             eeEEEEEc--cCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC---CCCceeEEeeeecCCCeEEEEEEeccCCCH
Q 010676          343 GSVYEGIS--DDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF---EHENIVQYYGTDKDESKLYIFLELVTKGSL  417 (504)
Q Consensus       343 G~VYka~~--~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L---~HpnIV~l~~~~~~~~~lyLVmEy~~ggsL  417 (504)
                      |.|..|..  .....|-+|+-.        ......|..|+.-|..|   +.-.+.+++.+....++.|+||||++-+.+
T Consensus        27 G~inea~~v~dg~~~~FvK~n~--------~~~~~~f~AEa~gL~~la~s~ti~VP~vi~~G~~~~~sylVle~L~~~~~   98 (286)
T COG3001          27 GDINEAWRLRDGTDPFFVKCNQ--------REQLSMFTAEADGLELLARSNTITVPKVIAVGASRDHSYLVLEYLPTGPL   98 (286)
T ss_pred             ccccceeEeecCCcceEEEecc--------hhhHHHHHHHHHHHHHHHhcCCccccceEEecCCCCeeEEEEeeccCCCC
Confidence            44444433  234566677322        33345566776666555   345688899999999999999999988655


Q ss_pred             H
Q 010676          418 L  418 (504)
Q Consensus       418 ~  418 (504)
                      .
T Consensus        99 d   99 (286)
T COG3001          99 D   99 (286)
T ss_pred             C
Confidence            3


No 495
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=94.10  E-value=0.34  Score=57.83  Aligned_cols=163  Identities=21%  Similarity=0.234  Sum_probs=103.4

Q ss_pred             ecccCceeEEEEEccC-----CceEEEEEEeccccchhhHHHHHHHHHHHHHHhhCCCCceeEEeeeecCCCe----EEE
Q 010676          337 LGRGSFGSVYEGISDD-----GFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRFEHENIVQYYGTDKDESK----LYI  407 (504)
Q Consensus       337 LG~G~FG~VYka~~~~-----g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~----lyL  407 (504)
                      |..-++|++|...+..     -..+-++.  ........+..+...+-|+..+.++.|+|++.++.|......    +.+
T Consensus       186 ls~~~~~~l~l~k~~~~~qs~~~~~~~s~--~~~~~~~~k~~i~~~E~e~~~l~k~~~~n~~~~~~~~le~~~~g~~~~v  263 (1351)
T KOG1035|consen  186 LSHLTQGTLLLVKWVEQAQSLSEPIEISH--DYESTPCGKKEIQTTEIELESLSKIAHDNLGGYFVYGLERLFRGIVLDV  263 (1351)
T ss_pred             eccccCceEEEEehhhhHHhhcCcccccC--cccCccchHHHHHHHHHHHHHHHhhccccccceeEEeehhhcchHHHHH
Confidence            6666778888776521     11111110  011112234445666778888999999999999988655433    234


Q ss_pred             EEEeccCCCHHHHHHhc-CCChHHHHHHHHHHHHHHHHHHHCCceecCCCCC---cEEEcCCCcEEEE--ecCccccccc
Q 010676          408 FLELVTKGSLLNLYQRY-HLRDSQVSAYTRQILLGLKYLHDQDVVHRDIKCA---NILVDANGSVKLA--DFGLAKATKL  481 (504)
Q Consensus       408 VmEy~~ggsL~~ll~~~-~l~e~~v~~i~~QIl~gL~yLHs~gIIHRDLKP~---NILLd~~g~VKL~--DFGLA~~~~~  481 (504)
                      ..+++...++..++..- .++...++.+..+++.||.|+|+..+.|.-|...   +..++..+.+.+.  ||+..+....
T Consensus       264 ~~~~~s~~~~~~~~q~v~~i~~~~~r~~~~~~~~GL~~~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d  343 (1351)
T KOG1035|consen  264 LQEICSKVELRSLLQSVGSIPLETLRILHQKLLEGLAYLHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPD  343 (1351)
T ss_pred             HHhhcCccchHHHHhhccccCHHHHHHHHHHHhhhHHHHHHhccceeEEecccccccccCccceeecchhhhcccccCCC
Confidence            44777777887777654 4778888899999999999999996666655554   4455566677776  8887765544


Q ss_pred             CCcc-cccCCCcccccccccC
Q 010676          482 NDVK-SCRGTAFWMAPEVCSN  501 (504)
Q Consensus       482 ~~~~-s~~GT~~YmAPEVL~g  501 (504)
                      .... ...-+..|.++|.+..
T Consensus       344 ~~~~~~~~~~~~~~~~e~~~~  364 (1351)
T KOG1035|consen  344 NEKSFSDLLAEIRNADEDLKE  364 (1351)
T ss_pred             cccchhhcCcccccccccccc
Confidence            3322 1223444666666543


No 496
>PF07387 Seadorna_VP7:  Seadornavirus VP7;  InterPro: IPR009973 This family consists of several Seadornavirus specific VP7 proteins of around 305 residues in length. The function of this family is unknown.
Probab=93.58  E-value=0.34  Score=48.61  Aligned_cols=84  Identities=23%  Similarity=0.265  Sum_probs=57.7

Q ss_pred             HHHHHHHHHhhCCCCceeEEeeeecCCCeEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHH--CCceec
Q 010676          376 QLEQEIALLSRFEHENIVQYYGTDKDESKLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYLHD--QDVVHR  453 (504)
Q Consensus       376 ~~~~Ei~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yLHs--~gIIHR  453 (504)
                      -+.++..+++++.  .|+++..-  ....+-+++|+|-.-..            ....++..=+..|.-+|+  .+.+|+
T Consensus       104 ~y~nky~v~Armh--GilrL~ND--n~~~yGvIlE~Cy~~~i------------~~~N~i~agi~~L~~fH~~~~~~lHG  167 (308)
T PF07387_consen  104 LYFNKYRVFARMH--GILRLKND--NNYKYGVILERCYKIKI------------NFSNFITAGIKDLMDFHSENQHCLHG  167 (308)
T ss_pred             hhhhhhhHHHHhh--heeEeecC--CCceeEEEEeeccCccc------------chhHHHHHhHHHHHHhhccCCCeecC
Confidence            3467788888753  67777632  44457789998853211            011222222556777884  469999


Q ss_pred             CCCCCcEEEcCCCcEEEEecCc
Q 010676          454 DIKCANILVDANGSVKLADFGL  475 (504)
Q Consensus       454 DLKP~NILLd~~g~VKL~DFGL  475 (504)
                      |-.|+|||-|..|.+||.|=+.
T Consensus       168 D~np~NiM~D~~G~lKlVDP~~  189 (308)
T PF07387_consen  168 DCNPDNIMCDKFGYLKLVDPVC  189 (308)
T ss_pred             CCChhheeecCCCCEEecChhh
Confidence            9999999999999999999764


No 497
>KOG1826 consensus Ras GTPase activating protein RasGAP/neurofibromin [Defense mechanisms]
Probab=93.25  E-value=0.026  Score=68.49  Aligned_cols=124  Identities=18%  Similarity=0.067  Sum_probs=87.3

Q ss_pred             HHHHHHHHhhCCCCceeEEeeeec--CCCeEEEEEEeccCCCHHHHHHhcC-----CChHHHHHHHHHHHHHHHHHHHCC
Q 010676          377 LEQEIALLSRFEHENIVQYYGTDK--DESKLYIFLELVTKGSLLNLYQRYH-----LRDSQVSAYTRQILLGLKYLHDQD  449 (504)
Q Consensus       377 ~~~Ei~iL~~L~HpnIV~l~~~~~--~~~~lyLVmEy~~ggsL~~ll~~~~-----l~e~~v~~i~~QIl~gL~yLHs~g  449 (504)
                      +..|...++...|+++...+.-..  +....|.+++|+.+|.+.+.+-++.     +...-+.....+.+....-+|.+.
T Consensus      1276 ll~e~de~~~~~h~~~~~~p~rI~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~kvsvl~~~~~ls~t 1355 (2724)
T KOG1826|consen 1276 LLSERDELREAKHYLTEVDPLRIPPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRHKVSVLNRNVILSLT 1355 (2724)
T ss_pred             hhhhhhhhhhhhceeeecccccCCCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHHHHHHhccchhhhcc
Confidence            344555666678999888766432  3345789999999999999875432     333444444445466666666532


Q ss_pred             -----ceecCCCCCcEEEcCCCcEEEEecCcccccccC--CcccccCCCccccccccc
Q 010676          450 -----VVHRDIKCANILVDANGSVKLADFGLAKATKLN--DVKSCRGTAFWMAPEVCS  500 (504)
Q Consensus       450 -----IIHRDLKP~NILLd~~g~VKL~DFGLA~~~~~~--~~~s~~GT~~YmAPEVL~  500 (504)
                           .+|++||+-|.+|..+..+|+.++|+.+.....  ..+...+++.|+.|++.+
T Consensus      1356 nlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~v~qli~N 1413 (2724)
T KOG1826|consen 1356 NLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIYVLQLIKN 1413 (2724)
T ss_pred             cCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHHHHHHHHH
Confidence                 689999999999999999999999999832211  234556888899988754


No 498
>KOG1236 consensus Predicted unusual protein kinase [General function prediction only]
Probab=91.34  E-value=0.59  Score=50.60  Aligned_cols=60  Identities=17%  Similarity=0.166  Sum_probs=46.2

Q ss_pred             eEEEEEEeccCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHH-HHCCceecCCCCCcEEEc
Q 010676          404 KLYIFLELVTKGSLLNLYQRYHLRDSQVSAYTRQILLGLKYL-HDQDVVHRDIKCANILVD  463 (504)
Q Consensus       404 ~lyLVmEy~~ggsL~~ll~~~~l~e~~v~~i~~QIl~gL~yL-Hs~gIIHRDLKP~NILLd  463 (504)
                      ...|+=+|..|-++..+++....++.....++.-.+++|--+ --.|++|.|++|.||++.
T Consensus       319 ~~vl~E~~~~Gl~v~~~v~~~~~pe~l~kkva~lg~~AllkMl~vDNFvHaDlHPGNVlir  379 (565)
T KOG1236|consen  319 DLVLVETYERGLSVLRFVKWKSQPEALVKKVAKLGVNALLKMLIVDNFVHADLHPGNVLIR  379 (565)
T ss_pred             cceeeeeccccccHHhhhhcccChHHHHHHHHHHHHHHHHHHHHhhcceecccCCCcEEEE
Confidence            346677888998999999888777766667766666665443 346899999999999995


No 499
>PHA00451 protein kinase
Probab=91.09  E-value=0.34  Score=49.28  Aligned_cols=125  Identities=14%  Similarity=0.189  Sum_probs=71.4

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHHHHHhhC--CCCceeEEeeeecCCCeEEEEEEec
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEIALLSRF--EHENIVQYYGTDKDESKLYIFLELV  412 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei~iL~~L--~HpnIV~l~~~~~~~~~lyLVmEy~  412 (504)
                      ++||.|-|+..|.-..-.|+  +||+-.+.   .........       +.++  ..+.|..+|.+-....++.+|++++
T Consensus        71 ~~LGNGHFSAAy~H~lLPgr--VIKVGFKK---EDSGAAYtA-------FCRM~QGR~GIPnVY~VaRHaGCYTVVLD~L  138 (362)
T PHA00451         71 NLLGNGHFSAAYSHELLPGR--VIKVGFKK---EDSGAAYTA-------FCRMHQGRAGIPNVYHVARHAGCYTVVLDYL  138 (362)
T ss_pred             HHhcCcchhhHhhcccCCCe--eEEecccc---ccccHHHHH-------HHHHhcCCCCCccHHHHHHhcCceEEehhhc
Confidence            56999999999986554443  34432211   111222222       2233  2688899998888888999999987


Q ss_pred             cCC-----CHH-------HHHHhcCCChHHHHH---HHHHHHHHHHHHHHCCceecCCCCCcEEEcCCCcEEEEe
Q 010676          413 TKG-----SLL-------NLYQRYHLRDSQVSA---YTRQILLGLKYLHDQDVVHRDIKCANILVDANGSVKLAD  472 (504)
Q Consensus       413 ~gg-----sL~-------~ll~~~~l~e~~v~~---i~~QIl~gL~yLHs~gIIHRDLKP~NILLd~~g~VKL~D  472 (504)
                      ...     +..       .++.....+...-..   =|.+.+.-|.-+ =.||.--|.+..|||++.+|...|+|
T Consensus       139 ~~C~r~~nd~h~~ya~~a~~~~e~~~d~~~~~~~~~~FIETCk~IRkF-F~GIASFDmHSGNiMf~~~g~p~ITD  212 (362)
T PHA00451        139 NPCYRESNDVHHHYAAAAYIIIECCSDAAEEYPGSQEFIETCKMIRKF-FYGIASFDMHSGNIMFDQDGVPYITD  212 (362)
T ss_pred             cccccccchHHHHHHHHHHHHHhccCCHHhccCCchhHHHHHHHHHHH-HhhhhcccccCCceeeCCCCCeEecC
Confidence            532     111       122222111111110   111222211111 13777889999999999999999998


No 500
>PF04655 APH_6_hur:  Aminoglycoside/hydroxyurea antibiotic resistance kinase;  InterPro: IPR006748 The aminoglycosides are a large group of biologically active bacterial secondary metabolites, best known for their antibiotic properties []. Aminoglycoside phosphotransferases achieve inactivation of these enzymes by phosphorylation, utilising ATP. Likewise, hydroxyurea is inactivated by phosphorylation of the hydroxy group in the hydroxylamine moiety.; GO: 0016773 phosphotransferase activity, alcohol group as acceptor, 0006468 protein phosphorylation, 0019748 secondary metabolic process
Probab=91.07  E-value=0.89  Score=45.90  Aligned_cols=75  Identities=23%  Similarity=0.171  Sum_probs=52.3

Q ss_pred             eeecccCceeEEEEEccCCceEEEEEEeccccchhhHHHHHHHHHHH---HHHhhCCCCceeEEeeeecCCCeEEEEEEe
Q 010676          335 DLLGRGSFGSVYEGISDDGFFFAVKEVSLLDQGSQAKQSISQLEQEI---ALLSRFEHENIVQYYGTDKDESKLYIFLEL  411 (504)
Q Consensus       335 k~LG~G~FG~VYka~~~~g~~vAVK~v~~~~~~~~~~~~~~~~~~Ei---~iL~~L~HpnIV~l~~~~~~~~~lyLVmEy  411 (504)
                      ..+..|..+.|+.++..+|...++|+......          +..|.   ..|+..+-...|++++....  .-.|+||.
T Consensus         8 ~~~~~g~~s~V~pv~~~dG~~avLKl~~p~~~----------~~~E~~g~~~L~~w~G~GaVrll~~d~~--~~AlLLEr   75 (253)
T PF04655_consen    8 GPPAHGSSSLVVPVRRADGTPAVLKLAPPHAE----------AEHEARGEAALRWWNGRGAVRLLAADPE--RGALLLER   75 (253)
T ss_pred             CCCCCCcceEEEEEEcCCCCeEEEEecCCccc----------chhhhhHHhHhheeCCCCceeeeccccc--cchhhhhh
Confidence            44667899999999999999999997753221          11232   45777777788999987533  45788898


Q ss_pred             c-cCCCHHHHH
Q 010676          412 V-TKGSLLNLY  421 (504)
Q Consensus       412 ~-~ggsL~~ll  421 (504)
                      + ++.+|.++.
T Consensus        76 l~~g~~L~~~~   86 (253)
T PF04655_consen   76 LDPGRSLASLP   86 (253)
T ss_pred             ccCCCchhhcc
Confidence            8 445665443


Done!