Query 010677
Match_columns 504
No_of_seqs 301 out of 2029
Neff 8.2
Searched_HMMs 29240
Date Mon Mar 25 11:55:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010677.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010677hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 3.4E-87 1.2E-91 708.0 40.8 472 33-504 1-478 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 8E-72 2.7E-76 574.0 35.7 361 32-504 1-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 1.3E-71 4.4E-76 573.9 34.9 367 31-504 7-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 2.4E-65 8.2E-70 522.9 35.7 332 66-504 11-342 (351)
5 3k1w_A Renin; protease, altern 100.0 3.2E-65 1.1E-69 520.0 35.5 333 65-504 5-340 (341)
6 3cms_A Chymosin B; hydrolase, 100.0 8.3E-65 2.8E-69 513.1 37.4 321 67-504 3-323 (323)
7 1dpj_A Proteinase A; proteinas 100.0 9.1E-65 3.1E-69 514.2 37.3 326 68-504 3-329 (329)
8 4aa9_A Chymosin; hydrolase, as 100.0 6.3E-65 2.1E-69 513.4 33.5 319 69-504 2-320 (320)
9 1am5_A Pepsin, acid proteinase 100.0 1.7E-64 5.9E-69 511.0 35.3 322 69-504 3-324 (324)
10 1htr_B Gastricsin; aspartyl pr 100.0 1.5E-64 5.1E-69 512.6 34.0 325 69-504 4-329 (329)
11 3qvc_A Histo-aspartic protease 100.0 1.1E-63 3.7E-68 523.9 36.9 323 64-504 123-449 (451)
12 1miq_A Plasmepsin; aspartic pr 100.0 1.4E-63 4.9E-68 513.4 36.2 322 65-504 49-374 (375)
13 2bju_A Plasmepsin II; aspartic 100.0 4.9E-63 1.7E-67 518.3 34.4 322 66-504 126-450 (453)
14 1yg9_A Aspartic protease BLA G 100.0 2.2E-62 7.4E-67 496.8 32.4 319 66-504 5-329 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 4.2E-62 1.4E-66 500.9 32.4 326 66-504 6-355 (361)
16 2apr_A Rhizopuspepsin; hydrola 100.0 1.2E-59 4.1E-64 475.7 38.0 311 74-504 11-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 8.2E-60 2.8E-64 477.7 36.0 313 74-503 11-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 1.2E-59 4E-64 476.6 34.8 310 76-503 13-329 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 2.1E-58 7E-63 469.5 36.8 313 68-504 3-329 (339)
20 2qzx_A Candidapepsin-5; aspart 100.0 3.9E-58 1.3E-62 467.9 37.3 315 67-504 2-331 (342)
21 1ibq_A Aspergillopepsin; aspar 100.0 3.7E-58 1.3E-62 464.8 36.4 309 76-504 12-325 (325)
22 1j71_A Candidapepsin, aspartic 100.0 3.2E-58 1.1E-62 467.1 35.4 309 68-504 3-324 (334)
23 1izd_A Aspartic proteinase; su 100.0 3E-58 1E-62 465.0 34.9 306 76-504 13-323 (323)
24 3pvk_A Candidapepsin-2; hydrol 100.0 9.2E-58 3.1E-62 465.2 35.1 315 68-504 3-331 (342)
25 1bxo_A Protein (penicillopepsi 100.0 3.5E-58 1.2E-62 464.6 31.3 306 76-504 13-323 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 3.6E-57 1.2E-61 460.5 35.3 313 67-504 2-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 7.1E-57 2.4E-61 475.5 27.7 326 71-504 67-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 1.8E-55 6.1E-60 455.2 32.1 322 71-504 6-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 5.5E-55 1.9E-59 454.3 30.5 323 72-504 22-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 1E-54 3.5E-59 451.2 31.6 324 71-504 14-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 2E-53 7E-58 442.4 27.8 324 67-503 9-386 (403)
32 3vla_A EDGP; extracellular, in 100.0 7.3E-53 2.5E-57 438.5 24.4 329 67-503 8-398 (413)
33 1t6e_X Xylanase inhibitor; two 100.0 5.3E-50 1.8E-54 413.7 22.3 323 69-504 4-373 (381)
34 1b5f_A Protein (cardosin A); h 100.0 3.2E-49 1.1E-53 382.0 25.5 238 67-308 2-239 (239)
35 1lya_B Cathepsin D; lysosomal 100.0 2.4E-45 8.1E-50 355.4 27.0 241 159-504 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 5.4E-24 1.8E-28 175.2 10.9 93 68-160 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 3.1E-21 1.1E-25 155.8 9.8 87 417-504 1-87 (87)
38 3rfi_A Asp; PSI, saposin, hydr 99.5 7.9E-15 2.7E-19 122.5 2.5 106 307-413 3-108 (108)
39 3bqp_A Proactivator polypeptid 96.5 0.0019 6.4E-08 49.9 3.7 40 375-414 2-41 (80)
40 2qyp_A Proactivator polypeptid 96.4 0.0023 7.9E-08 50.9 3.8 42 374-415 4-45 (91)
41 4ddj_A Saposin-A, protein A; s 96.4 0.003 1E-07 49.3 4.3 41 375-415 3-43 (83)
42 2gtg_A Proactivator polypeptid 95.3 0.016 5.3E-07 45.1 4.1 41 374-414 3-43 (83)
43 2i1a_A DNA damage-inducible pr 94.7 0.05 1.7E-06 47.1 6.4 92 76-192 23-116 (148)
44 1l9l_A Granulysin; saposin fol 94.7 0.022 7.4E-07 43.3 3.3 38 376-414 2-39 (74)
45 1n69_A Saposin B; lipid bindin 94.6 0.032 1.1E-06 43.1 4.3 40 375-414 3-43 (81)
46 1nkl_A NK-lysin; saposin fold, 94.5 0.024 8.2E-07 43.5 3.2 39 376-414 2-40 (78)
47 1of9_A Pore-forming peptide am 94.3 0.022 7.7E-07 43.6 2.7 40 375-415 2-41 (77)
48 2i1a_A DNA damage-inducible pr 91.8 0.41 1.4E-05 41.2 7.3 26 476-501 109-134 (148)
49 2qyp_A Proactivator polypeptid 91.6 0.035 1.2E-06 43.9 0.1 39 311-349 46-84 (91)
50 3s8i_A Protein DDI1 homolog 1; 91.5 0.24 8.3E-06 42.9 5.4 92 77-192 22-115 (148)
51 2js9_A Saposin-like protein fa 91.0 0.071 2.4E-06 42.9 1.3 51 373-425 19-69 (99)
52 2js9_A Saposin-like protein fa 90.3 0.064 2.2E-06 43.2 0.5 38 310-347 62-99 (99)
53 3s8i_A Protein DDI1 homolog 1; 89.9 0.8 2.7E-05 39.6 7.2 26 476-501 108-133 (148)
54 3bqp_A Proactivator polypeptid 89.8 0.045 1.6E-06 41.9 -0.8 37 311-347 43-79 (80)
55 2gtg_A Proactivator polypeptid 87.4 0.099 3.4E-06 40.4 -0.3 37 311-347 45-81 (83)
56 1nkl_A NK-lysin; saposin fold, 87.1 0.1 3.5E-06 39.9 -0.3 37 311-347 41-77 (78)
57 1of9_A Pore-forming peptide am 85.8 0.11 3.9E-06 39.6 -0.7 36 311-346 42-77 (77)
58 4ddj_A Saposin-A, protein A; s 80.8 0.18 6E-06 38.9 -1.5 36 312-347 46-82 (83)
59 1n69_A Saposin B; lipid bindin 80.7 0.22 7.7E-06 38.2 -0.9 36 311-347 45-80 (81)
60 2hs1_A HIV-1 protease; ultra-h 77.5 2.7 9.4E-05 33.5 4.5 30 81-112 10-39 (99)
61 1l9l_A Granulysin; saposin fol 77.3 0.5 1.7E-05 35.7 0.1 33 311-343 41-73 (74)
62 1fmb_A EIAV protease; hydrolas 74.6 2.9 0.0001 33.6 4.0 28 79-108 8-35 (104)
63 3liy_A Protease; hydrolase, hy 72.3 3.5 0.00012 33.6 3.9 32 81-112 12-46 (116)
64 3ec0_A Protease; HIV-2, inhibi 72.3 4.3 0.00015 32.3 4.4 29 81-111 10-38 (99)
65 3vcm_P Prorenin; aspartic prot 67.6 3.4 0.00012 27.3 2.5 23 31-53 7-29 (43)
66 3s64_A AC-SLP-1, saposin-like 66.5 1.3 4.5E-05 34.4 0.2 50 297-346 37-87 (87)
67 2hah_A Protease, retropepsin; 59.9 7.9 0.00027 31.7 3.8 28 80-110 15-42 (116)
68 1tzs_P Activation peptide from 59.7 4.4 0.00015 24.8 1.8 21 31-51 2-22 (35)
69 3sqf_A Protease; folded monome 58.1 9.7 0.00033 31.1 4.0 30 81-112 11-40 (114)
70 1htr_P Progastricsin (Pro segm 56.6 6 0.00021 25.6 2.1 21 32-52 2-22 (43)
71 3slz_A GAG-Pro-POL polyprotein 51.7 16 0.00056 30.5 4.5 31 78-110 21-51 (132)
72 2rsp_A RSV protease; hydrolase 41.9 23 0.0008 29.2 3.9 25 86-112 27-51 (124)
73 3ka2_A [L-Ala51;Gly51']HIV-1 p 39.6 24 0.00082 31.8 3.9 30 79-110 8-37 (203)
74 1bxo_A Protein (penicillopepsi 36.5 35 0.0012 32.8 4.9 42 245-296 3-44 (323)
75 1lya_A Cathepsin D; lysosomal 35.4 27 0.00091 27.3 3.2 32 257-296 13-44 (97)
76 1ibq_A Aspergillopepsin; aspar 35.0 37 0.0012 32.7 4.8 41 246-296 3-43 (325)
77 1izd_A Aspartic proteinase; su 33.4 42 0.0014 32.3 4.9 41 246-296 4-44 (323)
78 1b5f_A Protein (cardosin A); h 24.2 85 0.0029 28.6 5.1 39 69-109 181-227 (239)
79 1oew_A Endothiapepsin; hydrola 24.0 77 0.0026 30.4 4.9 43 246-296 3-46 (329)
80 1mpp_A Pepsin; hydrolase(acid 23.5 66 0.0023 31.3 4.4 44 245-296 4-49 (361)
81 3c9x_A Trichoderma reesei aspa 22.6 85 0.0029 30.1 4.9 43 246-296 3-46 (329)
82 3aup_A SBG7S, BG, basic 7S glo 22.6 77 0.0026 31.4 4.7 44 66-109 216-276 (403)
83 1fmb_A EIAV protease; hydrolas 22.1 46 0.0016 26.5 2.3 34 259-299 6-39 (104)
84 3ka2_A [L-Ala51;Gly51']HIV-1 p 21.3 95 0.0033 27.9 4.5 30 80-111 113-142 (203)
85 2hah_A Protease, retropepsin; 21.0 54 0.0018 26.7 2.6 30 258-295 11-40 (116)
86 2apr_A Rhizopuspepsin; hydrola 20.5 94 0.0032 29.7 4.7 40 247-296 5-46 (325)
87 2hs1_A HIV-1 protease; ultra-h 20.0 53 0.0018 25.9 2.3 30 259-295 6-35 (99)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=3.4e-87 Score=708.03 Aligned_cols=472 Identities=53% Similarity=1.060 Sum_probs=400.3
Q ss_pred EEEeeeeeccchhhhHHhccccc--c-cc--cccCC-CCCceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeE
Q 010677 33 LRIQLKKRQLGINTINAARLITK--N-EV--HNRFN-HPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWV 106 (504)
Q Consensus 33 ~~ipL~~~~~~~~~~~~~~~~~~--~-~~--~~~~~-~~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV 106 (504)
+||||+|++..++.+++.+..++ . .. +..+. +++...+||.|+.+.+|+++|+||||||+|.|+|||||+++||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV 80 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWV 80 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHHHhhcccccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEE
Confidence 48999999999888887653211 1 10 11122 2446779999999999999999999999999999999999999
Q ss_pred eCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccce
Q 010677 107 PSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDG 186 (504)
Q Consensus 107 ~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dG 186 (504)
++..|..+..|..++.|+|++|+||+..++.|.+.|++|++.|.+++|+|+||+..++++.||++....+..|....+||
T Consensus 81 ~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~~dG 160 (478)
T 1qdm_A 81 PSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDG 160 (478)
T ss_dssp EBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSE
T ss_pred ecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccccccc
Confidence 99999645689999999999999999999999999999999999999999999999999999999987665566677899
Q ss_pred eeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeE
Q 010677 187 ILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDI 266 (504)
Q Consensus 187 IlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i 266 (504)
|||||++..+.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|++.|+|+...++|.|.+++|
T Consensus 161 IlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i 240 (478)
T 1qdm_A 161 ILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDV 240 (478)
T ss_dssp EEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCE
T ss_pred eecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEE
Confidence 99999998877677889999999999999999999988643345899999999999999999999999899999999999
Q ss_pred EEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcce
Q 010677 267 LIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLC 346 (504)
Q Consensus 267 ~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 346 (504)
.|++..+.++..++.+|+||||+++++|.+++++|.+++++.+.+...|+.++++|+..|++.|++.++|.++|.++|+|
T Consensus 241 ~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC 320 (478)
T 1qdm_A 241 LVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLC 320 (478)
T ss_dssp EETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC
T ss_pred EECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcccccc
Confidence 99998876666788999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred eeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCC
Q 010677 347 VYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDI 426 (504)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~ 426 (504)
..+++...+.+++.|+++++...++...+..|.+|||++.|++++|+++.|+++|+++++++|+.++...|.|.+||+.+
T Consensus 321 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~ 400 (478)
T 1qdm_A 321 TFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL 400 (478)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG
T ss_pred ccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc
Confidence 99999888899999999887555555688999999999999999999999999999999999999999999999999988
Q ss_pred CCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 427 ASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 427 ~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
..+|+|+|+|+|++|+|+|++|+++..++....|+++|...+++++.++.||||++|||++|+|||++|+|||||+++
T Consensus 401 ~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 401 GSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp TTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 899999999999999999999999876544568999999888766667899999999999999999999999999986
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=8e-72 Score=573.96 Aligned_cols=361 Identities=39% Similarity=0.743 Sum_probs=318.0
Q ss_pred eEEEeeeeeccchhhhHHhccccc---cccc--c-cC-CCC--CceeEeceecCCceEEEEEEecCCCceEEEEEcCCCC
Q 010677 32 LLRIQLKKRQLGINTINAARLITK---NEVH--N-RF-NHP--KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSS 102 (504)
Q Consensus 32 ~~~ipL~~~~~~~~~~~~~~~~~~---~~~~--~-~~-~~~--~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs 102 (504)
++||||+|.++.|+++++.+.++. .+++ . +. ..+ ....+||.|+.|.+|+++|+||||||+|+|++||||+
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs 80 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHhhhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCC
Confidence 379999999999999888665432 1111 1 11 111 4677999999999999999999999999999999999
Q ss_pred CeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEEEEEEEEEEEECCeeccccEEEEEEeeCCcccccc
Q 010677 103 NLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLAL 182 (504)
Q Consensus 103 ~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~ 182 (504)
++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.|.+++|+|+|++..++++.||++....+..|...
T Consensus 81 ~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~ 159 (370)
T 3psg_A 81 NLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYA 159 (370)
T ss_dssp CEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGC
T ss_pred ccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccC
Confidence 9999999997 678999999999999999999999999999999999999999999999999999999988776667778
Q ss_pred ccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEE
Q 010677 183 QFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIK 262 (504)
Q Consensus 183 ~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~ 262 (504)
.+|||||||++..+.....|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.+.++|.|.
T Consensus 160 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~ 237 (370)
T 3psg_A 160 PFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQIT 237 (370)
T ss_dssp SCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTEEEE
T ss_pred CccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccceeEEE
Confidence 89999999999888777889999999999999999999999862 3489999999999999999999999999999999
Q ss_pred EeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCccccc
Q 010677 263 VGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSD 342 (504)
Q Consensus 263 l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (504)
+++|.|++..+. +..++.+|+||||+++++|.+++++|.+++++..
T Consensus 238 l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--------------------------------- 283 (370)
T 3psg_A 238 LDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE--------------------------------- 283 (370)
T ss_dssp ECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE---------------------------------
T ss_pred EeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc---------------------------------
Confidence 999999998775 6678999999999999999999999999997650
Q ss_pred CcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEc
Q 010677 343 IGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFIN 422 (504)
Q Consensus 343 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 422 (504)
...|.|.+|
T Consensus 284 -----------------------------------------------------------------------~~~g~~~v~ 292 (370)
T 3psg_A 284 -----------------------------------------------------------------------NSDGEMVIS 292 (370)
T ss_dssp -----------------------------------------------------------------------CTTCCEECC
T ss_pred -----------------------------------------------------------------------cCCCcEEEE
Confidence 234679999
Q ss_pred CCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEe
Q 010677 423 CDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAE 502 (504)
Q Consensus 423 C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~ 502 (504)
|+.+..+|+|+|+|+|.+++|++++|+++ . .+.|+++|+..+.+.+.++.||||++|||++|+|||++|+|||||+
T Consensus 293 C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~ 368 (370)
T 3psg_A 293 CSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAP 368 (370)
T ss_dssp GGGGGGCCCEEEEETTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CCCcccCCcEEEEECCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEE
Confidence 99888999999999999999999999998 2 2469999998776544556899999999999999999999999999
Q ss_pred cC
Q 010677 503 AA 504 (504)
Q Consensus 503 ~~ 504 (504)
|+
T Consensus 369 a~ 370 (370)
T 3psg_A 369 VA 370 (370)
T ss_dssp BC
T ss_pred cC
Confidence 86
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.3e-71 Score=573.89 Aligned_cols=367 Identities=37% Similarity=0.756 Sum_probs=298.9
Q ss_pred ceEEEeeeeeccchhhhHHhcc-ccccccc-----ccC-CCCCceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCC
Q 010677 31 GLLRIQLKKRQLGINTINAARL-ITKNEVH-----NRF-NHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSN 103 (504)
Q Consensus 31 ~~~~ipL~~~~~~~~~~~~~~~-~~~~~~~-----~~~-~~~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~ 103 (504)
+++||||+|+++.|+.+++.+. ..+..+. +.. .......+||.|+.+.+|+++|+||||||+|+|+|||||++
T Consensus 7 ~~~~i~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~ 86 (383)
T 2x0b_A 7 TFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSN 86 (383)
T ss_dssp --------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCC
T ss_pred cEEEEEEEECCcHHHHHHHhCchHHHHHHhhccccccccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCC
Confidence 4789999999998887776554 2211110 000 01234569999999999999999999999999999999999
Q ss_pred eeEeCCCCCC-CccccCCCCCCCCCCCceeecCceEEEEecceeEEEEEEEEEEEECCeeccccEEEEEEeeCCcccccc
Q 010677 104 LWVPSSKCLF-SISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLAL 182 (504)
Q Consensus 104 ~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~ 182 (504)
+||+|..|.. ...|..|+.|||++|+||+..++.|.+.|++|++.|.+++|+|+||+..++ +.||++....+..|...
T Consensus 87 lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~~ 165 (383)
T 2x0b_A 87 VWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALPFMLA 165 (383)
T ss_dssp EEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTTC
T ss_pred eEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCcccccC
Confidence 9999999962 357999999999999999999999999999999999999999999999999 99999998766556677
Q ss_pred ccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCCCC--CccEEEECccCCCCcccceeEEecCCccceE
Q 010677 183 QFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSE--VGGEIIFGGFDWRHFRGSHIYVPITEKGYWQ 260 (504)
Q Consensus 183 ~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~--~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~ 260 (504)
.+|||||||++..+.....|++++|++||+|++++||+||++..... .+|+|+|||+|+++|+|+++|+|+.+.++|.
T Consensus 166 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~ 245 (383)
T 2x0b_A 166 EFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQ 245 (383)
T ss_dssp SSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCE
T ss_pred CCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEE
Confidence 88999999999888777889999999999999999999999864321 3799999999999999999999999999999
Q ss_pred EEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCccc
Q 010677 261 IKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVC 340 (504)
Q Consensus 261 v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (504)
|.|++|.|+++.+. +..++.+|+||||+++++|.+++++|.+++++.
T Consensus 246 v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------------- 292 (383)
T 2x0b_A 246 IQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------------- 292 (383)
T ss_dssp EEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------------
T ss_pred EEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------------
Confidence 99999999998753 667899999999999999999999999999765
Q ss_pred ccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceE
Q 010677 341 SDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSF 420 (504)
Q Consensus 341 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 420 (504)
+ ..|.|.
T Consensus 293 ------------------------------------------------------------------------~-~~g~~~ 299 (383)
T 2x0b_A 293 ------------------------------------------------------------------------K-RLFDYV 299 (383)
T ss_dssp ------------------------------------------------------------------------E-CSSCEE
T ss_pred ------------------------------------------------------------------------c-cCCcEE
Confidence 1 245689
Q ss_pred EcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEE
Q 010677 421 INCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGF 500 (504)
Q Consensus 421 ~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGf 500 (504)
++|+.+..+|+|+|+|+|++++|+|++|+++..+.+...|+++|+..+.+++.++.||||++|||++|+|||++|+||||
T Consensus 300 v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGf 379 (383)
T 2x0b_A 300 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGF 379 (383)
T ss_dssp EEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEE
T ss_pred EeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeE
Confidence 99998889999999999999999999999986544456899999988766555679999999999999999999999999
Q ss_pred EecC
Q 010677 501 AEAA 504 (504)
Q Consensus 501 a~~~ 504 (504)
|+++
T Consensus 380 A~a~ 383 (383)
T 2x0b_A 380 ALAR 383 (383)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 9985
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=2.4e-65 Score=522.87 Aligned_cols=332 Identities=42% Similarity=0.832 Sum_probs=293.3
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecce
Q 010677 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (504)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 145 (504)
+...+||.|+.+..|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34558899999999999999999999999999999999999999997 46899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCC
Q 010677 146 QISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQD 225 (504)
Q Consensus 146 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~ 225 (504)
++.|.+++|+|+|++..++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||++.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 99999999999999999999999999877665566678899999999988777778899999999999999999999987
Q ss_pred CCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHh
Q 010677 226 PNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAI 305 (504)
Q Consensus 226 ~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l 305 (504)
......|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|++..+. +..++.+||||||+++++|.+++++|.+++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 4333479999999999999999999999999999999999999998753 567789999999999999999999999998
Q ss_pred ccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHH
Q 010677 306 GAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIV 385 (504)
Q Consensus 306 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (504)
++..
T Consensus 249 ~~~~---------------------------------------------------------------------------- 252 (351)
T 1tzs_A 249 GAAP---------------------------------------------------------------------------- 252 (351)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 7650
Q ss_pred HHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeE
Q 010677 386 FWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFI 465 (504)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~ 465 (504)
.. |.|.++|+.+..+|+|+|+|+|.+++|+|++|+++....+...|+++|+
T Consensus 253 ----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~ 303 (351)
T 1tzs_A 253 ----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQ 303 (351)
T ss_dssp ----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEE
T ss_pred ----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEE
Confidence 11 6688999987889999999999999999999999765433468999998
Q ss_pred eccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 466 ALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 466 ~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
..+.+.+..+.||||++|||++|+|||++++|||||+++
T Consensus 304 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 304 GLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp ECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 876544455789999999999999999999999999975
No 5
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=3.2e-65 Score=520.00 Aligned_cols=333 Identities=40% Similarity=0.820 Sum_probs=298.2
Q ss_pred CCceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCC-CccccCCCCCCCCCCCceeecCceEEEEec
Q 010677 65 PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLF-SISCYLHSRYRARLSRTYTKIGVPCKIHYG 143 (504)
Q Consensus 65 ~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg 143 (504)
++...+||.|+.|.+|+++|.||||||+++|++||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|+
T Consensus 5 ~~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg 84 (341)
T 3k1w_A 5 NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYS 84 (341)
T ss_dssp CBCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEET
T ss_pred CCCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEEC
Confidence 4577899999999999999999999999999999999999999999962 347989999999999999999999999999
Q ss_pred ceeEEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEec
Q 010677 144 SGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLN 223 (504)
Q Consensus 144 ~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~ 223 (504)
+|++.|.+++|+|+|++..+ ++.||++.......+....++||||||++..+.....|++++|++||.|++++||+||.
T Consensus 85 ~gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~ 163 (341)
T 3k1w_A 85 TGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYN 163 (341)
T ss_dssp TEEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEEC
T ss_pred CcEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEe
Confidence 99999999999999999999 99999999876544566778999999999887777889999999999999999999999
Q ss_pred CCC--CCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHH
Q 010677 224 QDP--NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQI 301 (504)
Q Consensus 224 ~~~--~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l 301 (504)
+.. +....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.+++..+. +..+..++|||||+++++|.+++++|
T Consensus 164 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i 242 (341)
T 3k1w_A 164 RDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKL 242 (341)
T ss_dssp CCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred CCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHH
Confidence 864 223489999999999999999999999999999999999999998753 56678999999999999999999999
Q ss_pred HHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhh
Q 010677 302 NHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFC 381 (504)
Q Consensus 302 ~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (504)
.+++++..
T Consensus 243 ~~~~~~~~------------------------------------------------------------------------ 250 (341)
T 3k1w_A 243 MEALGAKK------------------------------------------------------------------------ 250 (341)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99997650
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEE
Q 010677 382 EMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICI 461 (504)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~ 461 (504)
...| |.+||+....+|+|+|+|+|.+++|+|++|+++........|+
T Consensus 251 --------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~ 297 (341)
T 3k1w_A 251 --------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCT 297 (341)
T ss_dssp --------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEE
T ss_pred --------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEE
Confidence 1235 9999998788999999999999999999999986554467899
Q ss_pred EeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 462 SGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 462 ~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
++|+..+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 298 LAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp BSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999876554556789999999999999999999999999985
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=8.3e-65 Score=513.14 Aligned_cols=321 Identities=39% Similarity=0.748 Sum_probs=289.7
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee
Q 010677 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ 146 (504)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~ 146 (504)
...+||.|+.+.+|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999996 468999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCC
Q 010677 147 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDP 226 (504)
Q Consensus 147 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 226 (504)
+.|.+++|+|++++.+++++.||++....+..|....++||||||++..+.....+++++|++||.|.+++||+||.+..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876544555678999999999888777889999999999999999999998863
Q ss_pred CCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhc
Q 010677 227 NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 306 (504)
Q Consensus 227 ~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~ 306 (504)
. .|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 39999999999999999999999999999999999999998764 4567899999999999999999999999987
Q ss_pred cccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHH
Q 010677 307 AEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVF 386 (504)
Q Consensus 307 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (504)
+..
T Consensus 238 ~~~----------------------------------------------------------------------------- 240 (323)
T 3cms_A 238 ATQ----------------------------------------------------------------------------- 240 (323)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 540
Q ss_pred HHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEe
Q 010677 387 WIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIA 466 (504)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~ 466 (504)
...|.|.++|+....+|+|+|+|+|.+++|+|++|+++ ....|+++|+.
T Consensus 241 ---------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~~ 289 (323)
T 3cms_A 241 ---------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQS 289 (323)
T ss_dssp ---------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEE
T ss_pred ---------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEEe
Confidence 12366889999888999999999999999999999998 23589998886
Q ss_pred ccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 467 LDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 467 ~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
.+ .++.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 290 EN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp C-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 53 34689999999999999999999999999986
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=9.1e-65 Score=514.17 Aligned_cols=326 Identities=39% Similarity=0.777 Sum_probs=292.5
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeE
Q 010677 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQI 147 (504)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~ 147 (504)
..+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~ 81 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGSL 81 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEE
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCceE
Confidence 468999999999999999999999999999999999999999997 4569989999999999999999999999999999
Q ss_pred EEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCC
Q 010677 148 SGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPN 227 (504)
Q Consensus 148 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~ 227 (504)
.|.+++|+|+|++.+++++.||++....+..|....++||||||++..+.....+++++|++||+|++++||+||.+...
T Consensus 82 ~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~ 161 (329)
T 1dpj_A 82 EGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSK 161 (329)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGG
T ss_pred EEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCC
Confidence 99999999999999999999999988765345566789999999998876677889999999999999999999987531
Q ss_pred -CCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhc
Q 010677 228 -SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 306 (504)
Q Consensus 228 -~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~ 306 (504)
....|+|+|||+|+++|.|++.|+|+.++++|.|.+++|.|++..+. ..+..+||||||+++++|.+++++|.++++
T Consensus 162 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 162 DTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 22479999999999999999999999999999999999999998764 456889999999999999999999999986
Q ss_pred cccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHH
Q 010677 307 AEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVF 386 (504)
Q Consensus 307 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (504)
+.
T Consensus 240 ~~------------------------------------------------------------------------------ 241 (329)
T 1dpj_A 240 AK------------------------------------------------------------------------------ 241 (329)
T ss_dssp CE------------------------------------------------------------------------------
T ss_pred Cc------------------------------------------------------------------------------
Confidence 54
Q ss_pred HHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEe
Q 010677 387 WIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIA 466 (504)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~ 466 (504)
+...+.|.++|+....+|+|+|+|+|.+++|+|++|+++.. ..|+++|..
T Consensus 242 --------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~~ 291 (329)
T 1dpj_A 242 --------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAITP 291 (329)
T ss_dssp --------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEEE
T ss_pred --------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEEe
Confidence 02346789999987889999999999999999999999753 479999988
Q ss_pred ccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 467 LDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 467 ~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
.+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 292 ~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 292 MDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp CCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 76544456789999999999999999999999999985
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=6.3e-65 Score=513.41 Aligned_cols=319 Identities=41% Similarity=0.767 Sum_probs=285.3
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEE
Q 010677 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQIS 148 (504)
Q Consensus 69 ~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~ 148 (504)
.+||.|+.|.+|+++|+||||||+++|++||||+++||++..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47899999999999999999999999999999999999999997 56899999999999999999999999999999999
Q ss_pred EEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCCC
Q 010677 149 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (504)
Q Consensus 149 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 228 (504)
|.+++|+|+|++.+++++.||++....+..+....++||||||++..+.....+++++|++||.|++++||+||.+.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765566677899999999988877788999999999999999999999985
Q ss_pred CCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccc
Q 010677 229 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 308 (504)
Q Consensus 229 ~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~ 308 (504)
...|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.++++.+. +..+..++|||||+++++|.+++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 456789999999999999999999999998655
Q ss_pred cccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHH
Q 010677 309 GIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWI 388 (504)
Q Consensus 309 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (504)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (320)
T 4aa9_A 237 E------------------------------------------------------------------------------- 237 (320)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEecc
Q 010677 389 QMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALD 468 (504)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~ 468 (504)
...|.|.+||+....+|+|+|+|+|.+++|+|++|+.+ ....|+++|...
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~- 287 (320)
T 4aa9_A 238 -------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGD- 287 (320)
T ss_dssp -------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEE-
T ss_pred -------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcC-
Confidence 12467999999888899999999999999999999976 235899988762
Q ss_pred CCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 469 VPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 469 ~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
..++.||||++|||++|+|||++++|||||+|+
T Consensus 288 ---~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 288 ---NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ---TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 234679999999999999999999999999986
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=1.7e-64 Score=511.04 Aligned_cols=322 Identities=39% Similarity=0.734 Sum_probs=291.1
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEE
Q 010677 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQIS 148 (504)
Q Consensus 69 ~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~ 148 (504)
.+||.|+.+..|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 58999999999999999999999999999999999999999997 46799999999999999999999999999999999
Q ss_pred EEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCCC
Q 010677 149 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (504)
Q Consensus 149 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 228 (504)
|.+++|+|++++..++++.||++....+..+....++||||||++..+.....+++++|++||.|++++||+||++..
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-- 159 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG-- 159 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCC--
Confidence 999999999999999999999999876655666778999999999887767788999999999999999999998863
Q ss_pred CCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccc
Q 010677 229 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 308 (504)
Q Consensus 229 ~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~ 308 (504)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. +.+ ..++|||||+++++|++++++|.+++++.
T Consensus 160 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 160 ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred CCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999988999999999999998753 334 89999999999999999999999988542
Q ss_pred cccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHH
Q 010677 309 GIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWI 388 (504)
Q Consensus 309 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (504)
T Consensus 238 -------------------------------------------------------------------------------- 237 (324)
T 1am5_A 238 -------------------------------------------------------------------------------- 237 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEecc
Q 010677 389 QMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALD 468 (504)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~ 468 (504)
...|.|.++|+....+|+|+|+|+|.+++|+|++|+++. ...|+++|+..+
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~ 288 (324)
T 1am5_A 238 -------------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSG 288 (324)
T ss_dssp -------------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECC
T ss_pred -------------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECc
Confidence 013568899998889999999999999999999999975 358999998876
Q ss_pred CCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 469 VPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 469 ~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 289 ~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 289 VPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp SCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 544455789999999999999999999999999986
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=1.5e-64 Score=512.60 Aligned_cols=325 Identities=39% Similarity=0.801 Sum_probs=292.0
Q ss_pred eEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEE
Q 010677 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQIS 148 (504)
Q Consensus 69 ~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~ 148 (504)
.+||. +.+..|+++|.||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999997 45799999999999999999999999999999999
Q ss_pred EEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCCC
Q 010677 149 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (504)
Q Consensus 149 G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 228 (504)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||.|++++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~- 160 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG- 160 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC-
Confidence 9999999999999999999999987766556667789999999998887778899999999999999999999988632
Q ss_pred CCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccc
Q 010677 229 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 308 (504)
Q Consensus 229 ~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~ 308 (504)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+..+..+..++|||||+++++|++++++|.+++++.
T Consensus 161 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 161 SSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp SEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred CCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 23799999999999999999999999999999999999999987543456789999999999999999999999998765
Q ss_pred cccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHH
Q 010677 309 GIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWI 388 (504)
Q Consensus 309 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (504)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEecc
Q 010677 389 QMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALD 468 (504)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~ 468 (504)
...|.|.++|+.+..+|+|+|+|+|.+++|+|++|+++.. +.|+++|+..+
T Consensus 242 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~ 292 (329)
T 1htr_B 242 -------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTY 292 (329)
T ss_dssp -------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEEC
T ss_pred -------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECC
Confidence 1235688999987889999999999999999999999754 38999998776
Q ss_pred CCCCCCC-eEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 469 VPPPQGP-LWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 469 ~~~~~~~-~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
.+.+.++ .||||++|||++|+|||++++|||||+++
T Consensus 293 ~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 293 LSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 5444456 89999999999999999999999999985
No 11
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.1e-63 Score=523.93 Aligned_cols=323 Identities=32% Similarity=0.583 Sum_probs=289.4
Q ss_pred CCCceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEec
Q 010677 64 HPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYG 143 (504)
Q Consensus 64 ~~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg 143 (504)
.+....+||.|+.|.+|+++|+||||||++.|++||||+++||++..|. +..|..++.|+|++|+||+..++.+.+.|+
T Consensus 123 ~~~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~Yg 201 (451)
T 3qvc_A 123 GSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSK 201 (451)
T ss_dssp ----CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECS
T ss_pred cccCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEEC
Confidence 4467789999999999999999999999999999999999999999996 568999999999999999999999999999
Q ss_pred ceeEEEEEEEEEEEECCeeccccEEEEEEe----eCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEE
Q 010677 144 SGQISGFFSQDNVKIGDMIIKDQEFVEVTK----EGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFS 219 (504)
Q Consensus 144 ~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS 219 (504)
+|++.|.+++|+|++|+..++ +.||++.. ..+ +....++||||||++..+.....|++++|++||.|++++||
T Consensus 202 dGs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS 278 (451)
T 3qvc_A 202 AGTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYS 278 (451)
T ss_dssp SEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEE
T ss_pred CCEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEE
Confidence 999999999999999999999 99999988 544 55567899999999988877788999999999999999999
Q ss_pred EEecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHH
Q 010677 220 LWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVA 299 (504)
Q Consensus 220 l~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~ 299 (504)
+||.+.. ...|+|+|||+|+++|.|+++|+|+.++++|.|.++ |.|++. +..+..+++||||+++++|+++++
T Consensus 279 ~~L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~ 351 (451)
T 3qvc_A 279 IYLPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFN 351 (451)
T ss_dssp EECCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHH
T ss_pred EEEcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHH
Confidence 9999873 248999999999999999999999999999999999 999998 345678999999999999999999
Q ss_pred HHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchh
Q 010677 300 QINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCA 379 (504)
Q Consensus 300 ~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (504)
+|.+++++..
T Consensus 352 ~i~~~i~a~~---------------------------------------------------------------------- 361 (451)
T 3qvc_A 352 QFVESASVFK---------------------------------------------------------------------- 361 (451)
T ss_dssp HHHTTTTCEE----------------------------------------------------------------------
T ss_pred HHHHHcCCee----------------------------------------------------------------------
Confidence 9999887651
Q ss_pred hhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCccee
Q 010677 380 FCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTI 459 (504)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~ 459 (504)
....|.|.+||+ +..+|+|+|+|+|.+++|||++|+++..+.+...
T Consensus 362 ---------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~ 407 (451)
T 3qvc_A 362 ---------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSAL 407 (451)
T ss_dssp ---------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTE
T ss_pred ---------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCe
Confidence 122577999999 7899999999999999999999999876545578
Q ss_pred EEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 460 CISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 460 C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
|+++|+..+.+ ++.||||++|||++|+|||++++|||||+++
T Consensus 408 C~~~i~~~~~~---~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 408 CMLNIVPIDLE---KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECEEECCCS---TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999875421 4689999999999999999999999999985
No 12
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=1.4e-63 Score=513.45 Aligned_cols=322 Identities=33% Similarity=0.660 Sum_probs=288.9
Q ss_pred CCceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecc
Q 010677 65 PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGS 144 (504)
Q Consensus 65 ~~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 144 (504)
+....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++
T Consensus 49 ~~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~ 127 (375)
T 1miq_A 49 SENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGS 127 (375)
T ss_dssp BTTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETT
T ss_pred cCcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCC
Confidence 345668999999999999999999999999999999999999999997 5689999999999999999999999999999
Q ss_pred eeEEEEEEEEEEEECCeeccccEEEEEEe----eCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEE
Q 010677 145 GQISGFFSQDNVKIGDMIIKDQEFVEVTK----EGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSL 220 (504)
Q Consensus 145 g~~~G~~~~D~v~ig~~~~~~~~fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl 220 (504)
|++.|.+++|+|+||+..+++ .||++.. .. .|....++||||||++..+.....+++++|++||.|++++||+
T Consensus 128 Gs~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~ 204 (375)
T 1miq_A 128 GTVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTF 204 (375)
T ss_dssp EEEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEE
T ss_pred CeEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEE
Confidence 999999999999999999999 9999988 43 3555678999999999888777889999999999999999999
Q ss_pred EecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHH
Q 010677 221 WLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQ 300 (504)
Q Consensus 221 ~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~ 300 (504)
||.+.. ...|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|+++.+ .++.+||||||+++++|.+++++
T Consensus 205 ~L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~ 277 (375)
T 1miq_A 205 YLPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNK 277 (375)
T ss_dssp ECCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHH
T ss_pred EecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHH
Confidence 999863 248999999999999999999999999999999999 99999876 45789999999999999999999
Q ss_pred HHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhh
Q 010677 301 INHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAF 380 (504)
Q Consensus 301 l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (504)
|.+++++. +
T Consensus 278 l~~~~~~~---------------------------------------~-------------------------------- 286 (375)
T 1miq_A 278 FFANLNVI---------------------------------------K-------------------------------- 286 (375)
T ss_dssp HHHHHTCE---------------------------------------E--------------------------------
T ss_pred HHHHhCCc---------------------------------------c--------------------------------
Confidence 99999764 0
Q ss_pred hhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeE
Q 010677 381 CEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTIC 460 (504)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C 460 (504)
+...|.|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|
T Consensus 287 --------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C 333 (375)
T 1miq_A 287 --------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLC 333 (375)
T ss_dssp --------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEE
T ss_pred --------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeE
Confidence 1234678999997 7899999999999999999999998654344689
Q ss_pred EEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 461 ISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 461 ~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
+++|+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 334 ~~~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 334 MITMLPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp EESEEECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 9999876531 2689999999999999999999999999985
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4.9e-63 Score=518.33 Aligned_cols=322 Identities=34% Similarity=0.655 Sum_probs=288.2
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecce
Q 010677 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (504)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 145 (504)
....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+..++.|.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 45679999999999999999999999999999999999999999997 56899999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCeeccccEEEEEEeeC--CccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEec
Q 010677 146 QISGFFSQDNVKIGDMIIKDQEFVEVTKEG--LLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLN 223 (504)
Q Consensus 146 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~--~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~ 223 (504)
++.|.+++|+|++|+.+++ +.||++.... +..+....++||||||++..+.....|++++|++||.|++++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 544555678999999999888777889999999999999999999999
Q ss_pred CCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHH
Q 010677 224 QDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINH 303 (504)
Q Consensus 224 ~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~ 303 (504)
+.+ ..+|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|++ .+ + .++.+||||||+++++|++++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999998999999999 99999 33 3 66789999999999999999999988
Q ss_pred HhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhH
Q 010677 304 AIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEM 383 (504)
Q Consensus 304 ~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (504)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 87653
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCC-ceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEE
Q 010677 384 IVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMG-KSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICIS 462 (504)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~ 462 (504)
+...| .|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|++
T Consensus 362 -----------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 362 -----------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp -----------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred -----------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 01235 68999997 789999999999999999999999865434468999
Q ss_pred eeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 463 GFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 463 ~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
+|+..+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 412 ~~~~~~~~---~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 412 NIIGLDFP---VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CEEECCCS---SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99876521 3489999999999999999999999999975
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.2e-62 Score=496.78 Aligned_cols=319 Identities=27% Similarity=0.491 Sum_probs=284.9
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccc--cCCCCCCCCCCCceeecCceEEEEec
Q 010677 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISC--YLHSRYRARLSRTYTKIGVPCKIHYG 143 (504)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C--~~~~~y~~~~SsT~~~~~~~~~i~Yg 143 (504)
....+||.|+.+..|+++|+|| ||++.|++||||+++||++..|. ...| ..++.|+|++| ||+..++.|.+.|+
T Consensus 5 ~~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg 80 (330)
T 1yg9_A 5 VPLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFD 80 (330)
T ss_dssp CCSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETT
T ss_pred eeeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEEC
Confidence 3455789999999999999999 89999999999999999999997 4679 88899999999 99999999999999
Q ss_pred ceeEEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCc-CCCCCcHHHHHHHcCCCCccEEEEEe
Q 010677 144 SGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIA-AGNATPLWYNMVRQGHISQKIFSLWL 222 (504)
Q Consensus 144 ~g~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s-~~~~~~~~~~L~~qg~i~~~~FSl~l 222 (504)
+|++.|.+++|+|++++.+++++.||++... +..|....++||||||++..+ .....+++++|++||.| +++||+||
T Consensus 81 ~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l 158 (330)
T 1yg9_A 81 TGSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHH 158 (330)
T ss_dssp TEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEE
T ss_pred CceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEE
Confidence 9999999999999999999999999999987 444556678999999999887 66778899999999999 99999999
Q ss_pred cCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHH
Q 010677 223 NQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQIN 302 (504)
Q Consensus 223 ~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~ 302 (504)
++..+....|+|+|||+|+++|+|++.|+|+.+.++|.|.+++|.|+++.+. ..+..+||||||+++++|++++++|.
T Consensus 159 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~ 236 (330)
T 1yg9_A 159 ARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPIN 236 (330)
T ss_dssp EECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHH
T ss_pred cCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHH
Confidence 8864333479999999999999999999999999999999999999998764 56789999999999999999999999
Q ss_pred HHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhh
Q 010677 303 HAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCE 382 (504)
Q Consensus 303 ~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (504)
+++++..
T Consensus 237 ~~~~~~~------------------------------------------------------------------------- 243 (330)
T 1yg9_A 237 EAIGCVV------------------------------------------------------------------------- 243 (330)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHhCCcc-------------------------------------------------------------------------
Confidence 9997650
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCC--ce-EEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCccee
Q 010677 383 MIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMG--KS-FINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTI 459 (504)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~-~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~ 459 (504)
...| .| .+||+.+..+|+|+|+|+|++++|+|++|+++. ...
T Consensus 244 -------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~ 288 (330)
T 1yg9_A 244 -------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNL 288 (330)
T ss_dssp -------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTE
T ss_pred -------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCc
Confidence 0124 57 899998778999999999999999999999976 358
Q ss_pred EEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 460 CISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 460 C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
|+++|+.. +.++.||||++|||++|+|||++|+|||||+++
T Consensus 289 C~~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 289 CYSGFQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEESEEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99988864 234689999999999999999999999999985
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=4.2e-62 Score=500.87 Aligned_cols=326 Identities=26% Similarity=0.500 Sum_probs=287.3
Q ss_pred CceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecce
Q 010677 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (504)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 145 (504)
....+||.|+.+..|+++|.||||||++.|++||||+++||+|..|.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 35568999999999999999999999999999999999999999995234799999999999999999999999999999
Q ss_pred eEEEEEEEEEEEECCeeccccEEEEEEeeCC-----ccccccccceeeecccCcCcCCC------CCcHHHHHHHcCCCC
Q 010677 146 QISGFFSQDNVKIGDMIIKDQEFVEVTKEGL-----LPFLALQFDGILGLGFRDIAAGN------ATPLWYNMVRQGHIS 214 (504)
Q Consensus 146 ~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~-----~~~~~~~~dGIlGLg~~~~s~~~------~~~~~~~L~~qg~i~ 214 (504)
++.|.+++|+|+|++.+++++.||++....+ ..+....++||||||++..+... ..+++++|++||.|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998765 34556678999999998776433 788999999999999
Q ss_pred ccEEEEEecCCCCCCCccEEEECccCCCCcccceeEEecCCcc----ceEEEEeeEEEcCeEeeeecCCceEE-EccCcc
Q 010677 215 QKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKG----YWQIKVGDILIENSSTGFCEDGCTAI-LDSGTS 289 (504)
Q Consensus 215 ~~~FSl~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~----~w~v~l~~i~v~~~~~~~~~~~~~ai-vDSGTs 289 (504)
+++||+||.+. ...|.|+|||+|+++|.|++.|+|+.+.. +|.|.+++|.|+++.+. +..+..+| |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999885 23799999999999999999999998765 99999999999998764 34567899 999999
Q ss_pred CcccCHHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCC
Q 010677 290 VLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNG 369 (504)
Q Consensus 290 ~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 369 (504)
+++||.+++++|.+++++..
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~------------------------------------------------------------ 261 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDA------------------------------------------------------------ 261 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTC------------------------------------------------------------
T ss_pred ceeCCHHHHHHHHHHhCCcc------------------------------------------------------------
Confidence 99999999999999997640
Q ss_pred CCCCcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCC-ceEEEEE--C-----CEEE
Q 010677 370 SSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASM-PYVSFTI--G-----NRSF 441 (504)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~-P~l~f~~--~-----g~~~ 441 (504)
+...|.|.++|+.+..+ |+|+|+| + |.++
T Consensus 262 -------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~ 298 (361)
T 1mpp_A 262 -------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDV 298 (361)
T ss_dssp -------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEE
T ss_pred -------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEE
Confidence 11245688999977788 9999999 8 8999
Q ss_pred EeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 442 PLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 442 ~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
+|+|++|+++... +...|+++|+.. .++.||||++|||++|+|||++++|||||+++
T Consensus 299 ~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 299 SVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp EEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 9999999997643 245899888854 23579999999999999999999999999975
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.2e-59 Score=475.73 Aligned_cols=311 Identities=35% Similarity=0.613 Sum_probs=271.8
Q ss_pred ecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee-EEEEEE
Q 010677 74 NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFS 152 (504)
Q Consensus 74 ~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~-~~G~~~ 152 (504)
+..+..|+++|+||||||++.|++||||+++||+|..|..+ |..++.|+|++|+||+..++.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 45688999999999999999999999999999999999833 677889999999999999999999999998 799999
Q ss_pred EEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC-CCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010677 153 QDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA-GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (504)
Q Consensus 153 ~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~-~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 231 (504)
+|+|+|++.+++++.||++....+. |....++||||||++..+. ....+++++|++||+|++++||+||.+.. ....
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCC
Confidence 9999999999999999999887653 5555689999999987764 35778999999999999999999997642 1247
Q ss_pred cEEEECccCCCCcccceeEEecC-CccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccc
Q 010677 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 310 (504)
Q Consensus 232 G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~ 310 (504)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|+|++ .+ +..++.+||||||+++++|+++|+++++++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~-- 241 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGAS-- 241 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCE--
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcc--
Confidence 99999999999999999999997 4789999999999999 33 456789999999999999999999999988654
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHH
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 390 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (504)
+
T Consensus 242 -------------------------------------~------------------------------------------ 242 (325)
T 2apr_A 242 -------------------------------------D------------------------------------------ 242 (325)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010677 391 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 470 (504)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 470 (504)
+. .+.|.++|+. ..+|+|+|+|+|.+++||+++|+++.. ...|++.|+..+
T Consensus 243 ----------------------~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~-- 293 (325)
T 2apr_A 243 ----------------------NG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN-- 293 (325)
T ss_dssp ----------------------CS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES--
T ss_pred ----------------------CC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC--
Confidence 01 1568899985 348999999998899999999998654 368999887543
Q ss_pred CCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 471 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 471 ~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
.+.||||++|||++|+|||++|+|||||+++
T Consensus 294 ---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 ---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4579999999999999999999999999985
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=8.2e-60 Score=477.70 Aligned_cols=313 Identities=26% Similarity=0.438 Sum_probs=270.2
Q ss_pred ecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceee-cCceEEEEeccee-EEEEE
Q 010677 74 NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTK-IGVPCKIHYGSGQ-ISGFF 151 (504)
Q Consensus 74 ~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~-~~~~~~i~Yg~g~-~~G~~ 151 (504)
.+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|+|++|+||+. .++.|.+.|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 346889999999999999999999999999999999997 34567788999999999999 6899999999998 89999
Q ss_pred EEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC---CCCCcHHHHHHHcCCCCccEEEEEecCCCCC
Q 010677 152 SQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNS 228 (504)
Q Consensus 152 ~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~ 228 (504)
++|+|+|++.+++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998765323335779999999987764 3467899999986 8899999999874
Q ss_pred CCccEEEECccCCCCcccceeEEecC-CccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhcc
Q 010677 229 EVGGEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGA 307 (504)
Q Consensus 229 ~~~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~ 307 (504)
..|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|+++.+ +..++.+||||||+++++|++++++|.+++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2799999999999999999999997 5789999999999999865 35678999999999999999999999988743
Q ss_pred ccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHH
Q 010677 308 EGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFW 387 (504)
Q Consensus 308 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (504)
.. +
T Consensus 242 a~--------------------------------------~--------------------------------------- 244 (329)
T 3c9x_A 242 AQ--------------------------------------Y--------------------------------------- 244 (329)
T ss_dssp CE--------------------------------------E---------------------------------------
T ss_pred cE--------------------------------------E---------------------------------------
Confidence 30 0
Q ss_pred HHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEec
Q 010677 388 IQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIAL 467 (504)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~ 467 (504)
+...+.|.+||+ ..+|+|+|+|+|.+++||+++|++...+.+...|+++|+..
T Consensus 245 -------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 297 (329)
T 3c9x_A 245 -------------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSS 297 (329)
T ss_dssp -------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEEC
T ss_pred -------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcC
Confidence 112467889998 47899999999999999999999875433346899988754
Q ss_pred cCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEec
Q 010677 468 DVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEA 503 (504)
Q Consensus 468 ~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~ 503 (504)
+ ..+.||||++|||++|+|||++|+|||||+.
T Consensus 298 ~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 298 S----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp T----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred C----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 2 3468999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=1.2e-59 Score=476.58 Aligned_cols=310 Identities=25% Similarity=0.418 Sum_probs=267.4
Q ss_pred CCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceee-cCceEEEEeccee-EEEEEEE
Q 010677 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTK-IGVPCKIHYGSGQ-ISGFFSQ 153 (504)
Q Consensus 76 ~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~-~~~~~~i~Yg~g~-~~G~~~~ 153 (504)
.+..|+++|.||||||++.|++||||+++||+|..|. ...| .++.|+|++|+||+. .++.|.+.|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5789999999999999999999999999999999997 3456 788999999999999 6899999999998 8999999
Q ss_pred EEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC---CCCCcHHHHHHHcCCCCccEEEEEecCCCCCCC
Q 010677 154 DNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEV 230 (504)
Q Consensus 154 D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~ 230 (504)
|+|+|++..++++.||++....+..+....++||||||++..+. ....+++++|+++ |.+++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998765323335779999999987764 3467899999987 8899999999874 3
Q ss_pred ccEEEECccCCCCcccceeEEecC-CccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhcccc
Q 010677 231 GGEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEG 309 (504)
Q Consensus 231 ~G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~ 309 (504)
.|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|++..+. ..++.+||||||+++++|++++++|.+++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 799999999999999999999997 57899999999999998653 456789999999999999999999998874330
Q ss_pred ccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHH
Q 010677 310 IVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQ 389 (504)
Q Consensus 310 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (504)
+
T Consensus 243 --------------------------------------~----------------------------------------- 243 (329)
T 1oew_A 243 --------------------------------------S----------------------------------------- 243 (329)
T ss_dssp --------------------------------------E-----------------------------------------
T ss_pred --------------------------------------E-----------------------------------------
Confidence 0
Q ss_pred HHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccC
Q 010677 390 MQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDV 469 (504)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~ 469 (504)
+...+.|.++|+ ..+|+|+|+|+|.+++||+++|+++..+.+...|+++|+..+
T Consensus 244 -----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~- 297 (329)
T 1oew_A 244 -----------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA- 297 (329)
T ss_dssp -----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST-
T ss_pred -----------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC-
Confidence 122467889999 478999999999999999999998754333468999887542
Q ss_pred CCCCCCeEEeCHhhhccEEEEEeC-CCCeEEEEec
Q 010677 470 PPPQGPLWVLGDMFLRAYHTVFDF-GNLQIGFAEA 503 (504)
Q Consensus 470 ~~~~~~~~ILG~~fl~~~y~vfD~-~~~~iGfa~~ 503 (504)
..+.||||++|||++|+|||+ +++|||||++
T Consensus 298 ---~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 298 ---GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ---TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ---CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 346899999999999999999 9999999984
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.1e-58 Score=469.45 Aligned_cols=313 Identities=27% Similarity=0.475 Sum_probs=273.4
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC--CCCCccccCCCCCCCCCCCceeecCceEEEEecce
Q 010677 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--CLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG 145 (504)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~--C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 145 (504)
..+||.+. +..|+++|.||||||++.|++||||+++||++.. |.....|..++.|+|++|+||+..++.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 46788876 6799999999999999999999999999999765 76444799999999999999999999999999999
Q ss_pred -eEEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC----------CCCCcHHHHHHHcCCCC
Q 010677 146 -QISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA----------GNATPLWYNMVRQGHIS 214 (504)
Q Consensus 146 -~~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~----------~~~~~~~~~L~~qg~i~ 214 (504)
.+.|.+++|+|+|++..++++.||++..... .+||||||++..+. ....+++++|++||.|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999987653 49999999987653 23556999999999999
Q ss_pred ccEEEEEecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccC
Q 010677 215 QKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGP 294 (504)
Q Consensus 215 ~~~FSl~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP 294 (504)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|.+++..+.. +..++|||||++++||
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998753 24899999999999999999999999989999999999999998753 3679999999999999
Q ss_pred HHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCc
Q 010677 295 TTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINE 374 (504)
Q Consensus 295 ~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (504)
.+++++|.+++++.. +
T Consensus 230 ~~~~~~i~~~~~~~~---------------------------------------~------------------------- 245 (339)
T 3fv3_A 230 SDFAAQLADKAGARL---------------------------------------V------------------------- 245 (339)
T ss_dssp HHHHHHHHHHHTCEE---------------------------------------E-------------------------
T ss_pred HHHHHHHHHHcCCEE---------------------------------------c-------------------------
Confidence 999999999997650 0
Q ss_pred ccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEE-CCEEEEeCcccceEeec
Q 010677 375 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTI-GNRSFPLSPEQYIFKIE 453 (504)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~-~g~~~~l~p~~yi~~~~ 453 (504)
..+...+.|.+||+. ..+|+|+|+| +|.+++|++++|+++..
T Consensus 246 ------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~ 288 (339)
T 3fv3_A 246 ------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNG 288 (339)
T ss_dssp ------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECS
T ss_pred ------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCC
Confidence 000124568899996 5689999999 48999999999998753
Q ss_pred cCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 454 EGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 454 ~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
+ ..|+++|.. .+.||||++|||++|+|||++++|||||+++
T Consensus 289 ~---~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 289 D---GTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp S---SCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C---CeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 2 579998875 2469999999999999999999999999985
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=3.9e-58 Score=467.92 Aligned_cols=315 Identities=28% Similarity=0.458 Sum_probs=271.4
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCC--CCCC------CccccCCCCCCCCCCCceeecCceE
Q 010677 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS--KCLF------SISCYLHSRYRARLSRTYTKIGVPC 138 (504)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~SsT~~~~~~~~ 138 (504)
...+||.| .+..|+++|.||||||++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|
T Consensus 2 ~v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~ 80 (342)
T 2qzx_A 2 PVAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRF 80 (342)
T ss_dssp CEEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEE
T ss_pred ceeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcE
Confidence 34678888 5889999999999999999999999999999976 6752 2468889999999999999999999
Q ss_pred EEEeccee-EEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCC--CCCcHHHHHHHcCCCCc
Q 010677 139 KIHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQ 215 (504)
Q Consensus 139 ~i~Yg~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~ 215 (504)
.+.|++|+ +.|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++.+|++||.|++
T Consensus 81 ~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~ 153 (342)
T 2qzx_A 81 DIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGK 153 (342)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSS
T ss_pred EEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCc
Confidence 99999998 68999999999999999999999998753 4599999999876542 35679999999999999
Q ss_pred cEEEEEecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCH
Q 010677 216 KIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 295 (504)
Q Consensus 216 ~~FSl~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~ 295 (504)
++||+||.+.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+. .+..+||||||+++++|+
T Consensus 154 ~~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~ 228 (342)
T 2qzx_A 154 AAYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTR 228 (342)
T ss_dssp SEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECH
T ss_pred cEEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCH
Confidence 99999998752 3489999999999999999999999988899999999999998774 346799999999999999
Q ss_pred HHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcc
Q 010677 296 TVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINES 375 (504)
Q Consensus 296 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (504)
+++++|.+++++... ++
T Consensus 229 ~~~~~l~~~~~~~~~-------------------------------------~~-------------------------- 245 (342)
T 2qzx_A 229 SIVRNILYAIGAQMK-------------------------------------FD-------------------------- 245 (342)
T ss_dssp HHHHHHHHHHTCEEE-------------------------------------EC--------------------------
T ss_pred HHHHHHHHHhCCeee-------------------------------------ec--------------------------
Confidence 999999999976510 00
Q ss_pred cchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEE-CCEEEEeCcccceEeec-
Q 010677 376 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTI-GNRSFPLSPEQYIFKIE- 453 (504)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~-~g~~~~l~p~~yi~~~~- 453 (504)
+...+.|.+||+. +|+|+|+| +|.+++|++++|+++..
T Consensus 246 -------------------------------------~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~~~~~~~~ 285 (342)
T 2qzx_A 246 -------------------------------------SAGNKVYVADCKT---SGTIDFQFGNNLKISVPVSEFLFQTYY 285 (342)
T ss_dssp -------------------------------------TTSCEEEEECTTC---CCEEEEEETTTEEEEEEGGGGEECCBC
T ss_pred -------------------------------------cCCCcEEEEECCC---CCcEEEEECCCcEEEEcHHHhcccccc
Confidence 0112368899984 89999999 68999999999999743
Q ss_pred --cCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 454 --EGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 454 --~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
......|+++++.. +.||||++|||++|+|||++++|||||+++
T Consensus 286 ~~~~~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 286 TSGKPFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp TTSCBCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 12335799988743 259999999999999999999999999975
No 21
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=3.7e-58 Score=464.83 Aligned_cols=309 Identities=26% Similarity=0.407 Sum_probs=267.9
Q ss_pred CCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee-EEEEEEEE
Q 010677 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFSQD 154 (504)
Q Consensus 76 ~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~-~~G~~~~D 154 (504)
.+..|+++|+|| ||++.|++||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 578999999999 89999999999999999999997 4457788999999999 7778999999999998 89999999
Q ss_pred EEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC---CCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010677 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (504)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 231 (504)
+|+|++..++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765333335779999999987764 3577899999987 8899999999874 37
Q ss_pred cEEEECccCCCCcccceeEEecC-CccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccc
Q 010677 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 310 (504)
Q Consensus 232 G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~ 310 (504)
|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|.|+++.+ +..++.+||||||+++++|++++++|.+++.+..
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~- 238 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ- 238 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB-
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999997 5789999999999999865 3567899999999999999999999998884320
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHH
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 390 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (504)
T Consensus 239 -------------------------------------------------------------------------------- 238 (325)
T 1ibq_A 239 -------------------------------------------------------------------------------- 238 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010677 391 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 470 (504)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 470 (504)
.+...+.|.+||+ ..+|+|+|+|+|++++||+++|++...+.+...|+++|+..+
T Consensus 239 ---------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~-- 293 (325)
T 1ibq_A 239 ---------------------ESYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS-- 293 (325)
T ss_dssp ---------------------CCSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT--
T ss_pred ---------------------EcCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC--
Confidence 0122466889999 478999999999999999999998754323468999887542
Q ss_pred CCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 471 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 471 ~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
..+.||||++|||++|+|||++|+|||||+++
T Consensus 294 --~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 294 --GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp --TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 34689999999999999999999999999986
No 22
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-58 Score=467.10 Aligned_cols=309 Identities=28% Similarity=0.433 Sum_probs=270.2
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCC--CCCC------CccccCCCCCCCCCCCceeecCceEE
Q 010677 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS--KCLF------SISCYLHSRYRARLSRTYTKIGVPCK 139 (504)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~--~C~~------~~~C~~~~~y~~~~SsT~~~~~~~~~ 139 (504)
..+||.+. +..|+++|.||||||++.|++||||+++||++. .|.. ...|..++.|+|++|+||+..++.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 45788886 889999999999999999999999999999976 6752 23798899999999999999999999
Q ss_pred EEeccee-EEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC--CCCCcHHHHHHHcCCCCcc
Q 010677 140 IHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--GNATPLWYNMVRQGHISQK 216 (504)
Q Consensus 140 i~Yg~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~i~~~ 216 (504)
+.|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+. ....+++++|++||.|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999998 68999999999999999999999998753 459999999987654 2456789999999999999
Q ss_pred EEEEEecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 217 IFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 217 ~FSl~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
+||+||.+.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.++++.+. .+..+||||||+++++|.+
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 3489999999999999999999999988999999999999998874 3467999999999999999
Q ss_pred HHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccc
Q 010677 297 VVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINEST 376 (504)
Q Consensus 297 ~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (504)
++++|.+++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999997650
Q ss_pred chhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceE-EcCCCCCCCceEEEEE-CCEEEEeCcccceEeecc
Q 010677 377 LCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSF-INCDDIASMPYVSFTI-GNRSFPLSPEQYIFKIEE 454 (504)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~-~~C~~~~~~P~l~f~~-~g~~~~l~p~~yi~~~~~ 454 (504)
+...+.|. ++|+. +|+|+|+| +|.+++|++++|+++..+
T Consensus 243 ------------------------------------~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~y~~~~~~ 283 (334)
T 1j71_A 243 ------------------------------------DSRNEIYRLPSCDL---SGDAVFNFDQGVKITVPLSELILKDSD 283 (334)
T ss_dssp ------------------------------------ETTTTEEECSSSCC---CSEEEEEESTTCEEEEEGGGGEEECSS
T ss_pred ------------------------------------cCCCceEEEEcCCC---CCceEEEEcCCcEEEECHHHheeecCC
Confidence 01124577 89984 89999999 789999999999998543
Q ss_pred CcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 455 GHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 455 ~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
+ ..|+++++.. +.||||++|||++|+|||++++|||||+++
T Consensus 284 ~--~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 284 S--SICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp S--SCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C--CeeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 2 3599988743 359999999999999999999999999975
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3e-58 Score=465.00 Aligned_cols=306 Identities=27% Similarity=0.405 Sum_probs=266.6
Q ss_pred CCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee-EEEEEEEE
Q 010677 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFSQD 154 (504)
Q Consensus 76 ~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~-~~G~~~~D 154 (504)
.+..|+++|+|| ||+++|++||||+++||+|..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 578999999999 79999999999999999999997 4467788999999999 8778899999999998 89999999
Q ss_pred EEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC---CCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010677 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (504)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 231 (504)
+|+|++.+++++.||++....+..+....++||||||++..+. ....+++++|++| |.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998765333335779999999987765 3577899999987 8899999999874 27
Q ss_pred cEEEECccCCCCcccceeEEecC-CccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccc
Q 010677 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 310 (504)
Q Consensus 232 G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~ 310 (504)
|+|+|||+|+++|.|++.|+|+. ..++|.|.+++|.|++ .+ +..++.+|+||||+++++|++++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~- 238 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS- 238 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE-
T ss_pred CEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE-
Confidence 99999999999999999999997 5789999999999999 44 4677899999999999999999999998874320
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHH
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 390 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (504)
+
T Consensus 239 -------------------------------------~------------------------------------------ 239 (323)
T 1izd_A 239 -------------------------------------Y------------------------------------------ 239 (323)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010677 391 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 470 (504)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 470 (504)
+...|.|.+||+ ..+|+|+|+|+|++++||+++|+++.. +...|+++|+..+
T Consensus 240 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~--~~~~C~~~i~~~~-- 291 (323)
T 1izd_A 240 ----------------------DSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADV--GNGQTFGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEEC--STTEEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecC--CCCeEEEEEEcCC--
Confidence 122467899999 478999999999999999999998753 2468999887642
Q ss_pred CCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 471 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 471 ~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
..+.||||++|||++|+|||++++|||||+++
T Consensus 292 --~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 292 --GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp --TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 34689999999999999999999999999986
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=9.2e-58 Score=465.19 Aligned_cols=315 Identities=29% Similarity=0.456 Sum_probs=269.2
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC--CC------CCccccCCCCCCCCCCCceeecCceEE
Q 010677 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--CL------FSISCYLHSRYRARLSRTYTKIGVPCK 139 (504)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~--C~------~~~~C~~~~~y~~~~SsT~~~~~~~~~ 139 (504)
..+||.+. +..|+++|.||||||++.|++||||+++||++.. |. ....|..++.|+|++|+||+..++.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778774 7899999999999999999999999999999765 73 235798899999999999999999999
Q ss_pred EEeccee-EEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCC-CCCcHHHHHHHcCCCCccE
Q 010677 140 IHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG-NATPLWYNMVRQGHISQKI 217 (504)
Q Consensus 140 i~Yg~g~-~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~-~~~~~~~~L~~qg~i~~~~ 217 (504)
+.|++|+ +.|.+++|+|+|++..++++.||++.... ..+||||||++..+.. ...+++++|++||.|++++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998754 4599999999876543 3567999999999999999
Q ss_pred EEEEecCCCCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHH
Q 010677 218 FSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 297 (504)
Q Consensus 218 FSl~l~~~~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~ 297 (504)
||+||++.. ...|+|+|||+|+++|.|+++|+|+....+|.|.+++|.++++.+.. .+..++|||||++++||.++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23799999999999999999999999988999999999999998753 34789999999999999999
Q ss_pred HHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccc
Q 010677 298 VAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTL 377 (504)
Q Consensus 298 ~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (504)
+++|.+++++...
T Consensus 231 ~~~i~~~~~~~~~------------------------------------------------------------------- 243 (342)
T 3pvk_A 231 ADQIIKAFNGKLT------------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHHHTTCEEE-------------------------------------------------------------------
T ss_pred HHHHHHHcCCeec-------------------------------------------------------------------
Confidence 9999999976610
Q ss_pred hhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEEC-CEEEEeCcccceEeeccC-
Q 010677 378 CAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIG-NRSFPLSPEQYIFKIEEG- 455 (504)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~-g~~~~l~p~~yi~~~~~~- 455 (504)
......+.|.+||+. .|+|+|+|+ |.+++||+++|+++....
T Consensus 244 ---------------------------------~~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~vp~~~~~~~~~~~~ 287 (342)
T 3pvk_A 244 ---------------------------------QDSNGNSFYEVDCNL---SGDVVFNFSKNAKISVPASEFAASLQGDD 287 (342)
T ss_dssp ---------------------------------ECTTSCEEEEECSCC---CSEEEEEESTTCEEEEEGGGGEEC-----
T ss_pred ---------------------------------ccCCCceEEEEecCC---CCceEEEECCCCEEEEcHHHheeeccccC
Confidence 000112358999994 599999997 899999999999974321
Q ss_pred --cceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 456 --HSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 456 --~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
....|++++... +.||||++|||++|+|||++++|||||+++
T Consensus 288 g~~~~~C~~~i~~~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 288 GQPYDKCQLLFDVN-------DANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp -----CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCcCCeeEEEEeeC-------CCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 136799988752 468999999999999999999999999985
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.5e-58 Score=464.57 Aligned_cols=306 Identities=25% Similarity=0.415 Sum_probs=265.2
Q ss_pred CCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee-EEEEEEEE
Q 010677 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ-ISGFFSQD 154 (504)
Q Consensus 76 ~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~-~~G~~~~D 154 (504)
.+..|+++|+|| ||++.|++||||+++||++..|. ...|..++.|+|++|+ ++..++.|.+.|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999997 4457788999999999 8878899999999998 89999999
Q ss_pred EEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC---CCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010677 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 231 (504)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~ 231 (504)
+|+|++.+++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 9999999999999999998765333335779999999987764 2567899999987 8899999999874 27
Q ss_pred cEEEECccCCCCcccceeEEecC-CccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccc
Q 010677 232 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 310 (504)
Q Consensus 232 G~L~fGgid~~~~~g~l~~~pv~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~ 310 (504)
|+|+|||+|+++|+|++.|+|+. +.++|.|.+++|.|++ + +..++.+||||||+++++|++++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~- 237 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ- 237 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCE-
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999996 5789999999999999 2 3456789999999999999999999998884330
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHH
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 390 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (504)
+
T Consensus 238 -------------------------------------~------------------------------------------ 238 (323)
T 1bxo_A 238 -------------------------------------Q------------------------------------------ 238 (323)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010677 391 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 470 (504)
Q Consensus 391 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 470 (504)
+...|.|.+||+ ..+|+|+|+|+|.+++||+++|+++... +...|+++|+..+
T Consensus 239 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~-- 291 (323)
T 1bxo_A 239 ----------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEEEECCC--
Confidence 123467899999 4789999999999999999999987532 3368999887642
Q ss_pred CCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 471 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 471 ~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
..+.||||++|||++|+|||++|+|||||+++
T Consensus 292 --~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 292 --GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp --TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 34689999999999999999999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.6e-57 Score=460.48 Aligned_cols=313 Identities=27% Similarity=0.441 Sum_probs=266.6
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee
Q 010677 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ 146 (504)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~ 146 (504)
...+||.|+ +..|+++|.||||||++.|++||||+++||+|. +.|+|++|++ ..++.|.+.|++|+
T Consensus 2 ~~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~--~~~~~~~i~Yg~Gs 67 (340)
T 1wkr_A 2 AGSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSS--ATSDKVSVTYGSGS 67 (340)
T ss_dssp CEEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCE--EEEEEEEEECSSCE
T ss_pred CccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCcc--ccCceEEEEECCcE
Confidence 356899997 679999999999999999999999999999743 4689988775 45789999999999
Q ss_pred EEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcC--------CCCCcHHHHHHHcCCCCccEE
Q 010677 147 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--------GNATPLWYNMVRQGHISQKIF 218 (504)
Q Consensus 147 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--------~~~~~~~~~L~~qg~i~~~~F 218 (504)
+.|.+++|+|+|++.+++++.||++....+ + ..++||||||++..+. ...++++++|++||+|++++|
T Consensus 68 ~~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~F 143 (340)
T 1wkr_A 68 FSGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLL 143 (340)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEE
T ss_pred EEEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEE
Confidence 999999999999999999999999988654 2 2579999999987764 356789999999999999999
Q ss_pred EEEecCCC-CCCCccEEEECccCCCCcccceeEEecCC----ccceEEEEeeEEEcC-eEeeeecCCceEEEccCccCcc
Q 010677 219 SLWLNQDP-NSEVGGEIIFGGFDWRHFRGSHIYVPITE----KGYWQIKVGDILIEN-SSTGFCEDGCTAILDSGTSVLA 292 (504)
Q Consensus 219 Sl~l~~~~-~~~~~G~L~fGgid~~~~~g~l~~~pv~~----~~~w~v~l~~i~v~~-~~~~~~~~~~~aivDSGTs~i~ 292 (504)
|+||.+.. .....|+|+|||+|+++|.|++.|+|+.. .++|.|. ++|.|++ +.+. .+..+||||||++++
T Consensus 144 S~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~ 219 (340)
T 1wkr_A 144 AVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTL 219 (340)
T ss_dssp EEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEE
T ss_pred EEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCccccc
Confidence 99998742 12347999999999999999999999987 7899999 9999998 7653 236899999999999
Q ss_pred cCHHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCC
Q 010677 293 GPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSI 372 (504)
Q Consensus 293 lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (504)
+|.+++++|.+++++. +
T Consensus 220 lP~~~~~~l~~~~~a~---------------------------------------~------------------------ 236 (340)
T 1wkr_A 220 IASDAFAKYKKATGAV---------------------------------------A------------------------ 236 (340)
T ss_dssp ECHHHHHHHHHHHTCE---------------------------------------E------------------------
T ss_pred CCHHHHHHHHHhhCCE---------------------------------------E------------------------
Confidence 9999999999888765 0
Q ss_pred CcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEee
Q 010677 373 NESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKI 452 (504)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~ 452 (504)
....|.|.+||+....+|+|+|+|+|.+++|+|++|+++.
T Consensus 237 ----------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~ 276 (340)
T 1wkr_A 237 ----------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPR 276 (340)
T ss_dssp ----------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCG
T ss_pred ----------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhcccc
Confidence 1224678999987678999999999999999999999865
Q ss_pred cc-----CcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 453 EE-----GHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 453 ~~-----~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
.. +....|++.|...+.+...++.||||++|||++|+|||++++|||||+++
T Consensus 277 ~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 277 NLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp GGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred ccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 42 12357998888765433334579999999999999999999999999974
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=7.1e-57 Score=475.49 Aligned_cols=326 Identities=27% Similarity=0.448 Sum_probs=263.8
Q ss_pred eceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEEEE
Q 010677 71 YLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGF 150 (504)
Q Consensus 71 ~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~G~ 150 (504)
+|.+..+..|+++|+||||||+|+|+|||||+++||+|..| |..++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 45556678999999999999999999999999999999887 5678899999999999999999999999999999
Q ss_pred EEEEEEEECC-eecc-ccEEEEEEeeCCccccccccceeeecccCcCcCC--CCCcHHHHHHHcCCCCccEEEEEecCCC
Q 010677 151 FSQDNVKIGD-MIIK-DQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQKIFSLWLNQDP 226 (504)
Q Consensus 151 ~~~D~v~ig~-~~~~-~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 226 (504)
+++|+|+|++ ..++ .+.|+++............++||||||++..+.. ...+++++|++|+.|+ ++||+||.+..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 3333 3567877665543223467899999999987754 3788999999999997 99999997631
Q ss_pred C--------CCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeec---CCceEEEccCccCcccCH
Q 010677 227 N--------SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGPT 295 (504)
Q Consensus 227 ~--------~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aivDSGTs~i~lP~ 295 (504)
. ....|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+.. ....+||||||+++++|.
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 0 23479999999999999999999999999999999999999999875422 256899999999999999
Q ss_pred HHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcc
Q 010677 296 TVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINES 375 (504)
Q Consensus 296 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (504)
+++++|.+++++... .+ .+..
T Consensus 301 ~~~~~i~~~i~~~~~----~~----~~~~--------------------------------------------------- 321 (455)
T 3lpj_A 301 KVFEAAVKSIKAASS----TE----KFPD--------------------------------------------------- 321 (455)
T ss_dssp HHHHHHHHHHHHHTT----TS----CCCH---------------------------------------------------
T ss_pred HHHHHHHHHhhhhcc----cc----ccCc---------------------------------------------------
Confidence 999999999976510 00 0000
Q ss_pred cchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCCC-----CceEEEEECCE------EEEeC
Q 010677 376 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIAS-----MPYVSFTIGNR------SFPLS 444 (504)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~-----~P~l~f~~~g~------~~~l~ 444 (504)
.....+.++|..... +|+|+|+|+|. +++|+
T Consensus 322 --------------------------------------~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 363 (455)
T 3lpj_A 322 --------------------------------------GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 363 (455)
T ss_dssp --------------------------------------HHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred --------------------------------------ccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEEC
Confidence 000123568876554 89999999775 59999
Q ss_pred cccceEeeccCc--ceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 445 PEQYIFKIEEGH--STICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 445 p~~yi~~~~~~~--~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
|++|+++..+.. ...|++ |... +..+.||||++|||++|+|||++|+|||||+++
T Consensus 364 ~~~yi~~~~~~~~~~~~C~~-f~~~----~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 364 PQQYLRPVEDVATSQDDCYK-FAIS----QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp HHHHEEEECCTTCCSCEEEE-ECEE----EESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred HHHheEeccCCCCCCceEEE-Eecc----CCCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 999999865432 257996 3211 123579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.8e-55 Score=455.15 Aligned_cols=322 Identities=25% Similarity=0.424 Sum_probs=260.0
Q ss_pred eceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEEEE
Q 010677 71 YLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGF 150 (504)
Q Consensus 71 ~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~G~ 150 (504)
+|.+..+..|+++|+||||||++.|++||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 80 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTGF 80 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEEE
Confidence 577777889999999999999999999999999999999886 34 6789999999999999999999999999999
Q ss_pred EEEEEEEECCee-cc-ccEEEEEEeeCCccccccccceeeecccCcCcC--CCCCcHHHHHHHcCCCCccEEEEEecCC-
Q 010677 151 FSQDNVKIGDMI-IK-DQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--GNATPLWYNMVRQGHISQKIFSLWLNQD- 225 (504)
Q Consensus 151 ~~~D~v~ig~~~-~~-~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~L~~qg~i~~~~FSl~l~~~- 225 (504)
+++|+|+|++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.+ +++||+||++.
T Consensus 81 ~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~~ 159 (383)
T 2ewy_A 81 VGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGAG 159 (383)
T ss_dssp EEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC-
T ss_pred EEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeeccc
Confidence 999999998633 22 245777655443221235679999999988764 4578899999999999 79999999752
Q ss_pred ----CCCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecC---CceEEEccCccCcccCHHHH
Q 010677 226 ----PNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCED---GCTAILDSGTSVLAGPTTVV 298 (504)
Q Consensus 226 ----~~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~---~~~aivDSGTs~i~lP~~~~ 298 (504)
......|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.+... ...+||||||+++++|++++
T Consensus 160 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~ 239 (383)
T 2ewy_A 160 LPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVF 239 (383)
T ss_dssp --------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHH
T ss_pred cccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHH
Confidence 12234899999999999999999999999999999999999999988754222 46899999999999999999
Q ss_pred HHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccch
Q 010677 299 AQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLC 378 (504)
Q Consensus 299 ~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (504)
++|.+++++.... .
T Consensus 240 ~~l~~~i~~~~~~--------~---------------------------------------------------------- 253 (383)
T 2ewy_A 240 DAVVEAVARASLI--------P---------------------------------------------------------- 253 (383)
T ss_dssp HHHHHHHHHTTCS--------S----------------------------------------------------------
T ss_pred HHHHHHHhhhccc--------c----------------------------------------------------------
Confidence 9999999765100 0
Q ss_pred hhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCC---CceEEcCCCCC-----CCceEEEEECC------EEEEeC
Q 010677 379 AFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPM---GKSFINCDDIA-----SMPYVSFTIGN------RSFPLS 444 (504)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~---~~~~~~C~~~~-----~~P~l~f~~~g------~~~~l~ 444 (504)
.... ..+.++|.... .+|+|+|+|+| .+++|+
T Consensus 254 ----------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 299 (383)
T 2ewy_A 254 ----------------------------------EFSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITIL 299 (383)
T ss_dssp ----------------------------------CCCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred ----------------------------------cCccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEC
Confidence 0000 12467786542 58999999976 389999
Q ss_pred cccceEeecc-CcceeEEE-eeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 445 PEQYIFKIEE-GHSTICIS-GFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 445 p~~yi~~~~~-~~~~~C~~-~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
|++|+.+..+ +....|+. ++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 300 ~~~yi~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 300 PQLYIQPMMGAGLNYECYRFGISP------STNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp HHHHEEEECCCTTCSEEEEESEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred hHHheeecccCCCCceeEEEEecC------CCCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 9999997642 22457985 4442 12479999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=5.5e-55 Score=454.30 Aligned_cols=323 Identities=27% Similarity=0.447 Sum_probs=259.7
Q ss_pred ceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEEEEE
Q 010677 72 LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGFF 151 (504)
Q Consensus 72 l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~G~~ 151 (504)
|....+..|+++|+||||||+++|+|||||+++||++..| |..++.|+|++|+||+..++.|.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4444567999999999999999999999999999999887 55688999999999999999999999999999999
Q ss_pred EEEEEEEC-Ceecccc-EEEEEEeeCCccccccccceeeecccCcCcCC--CCCcHHHHHHHcCCCCccEEEEEecCCC-
Q 010677 152 SQDNVKIG-DMIIKDQ-EFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQKIFSLWLNQDP- 226 (504)
Q Consensus 152 ~~D~v~ig-~~~~~~~-~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~~- 226 (504)
++|+|+|+ +..++.+ .|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||.+..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 4555543 46766655443223467899999999987754 3788999999999997 99999997531
Q ss_pred ----C---CCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeec---CCceEEEccCccCcccCHH
Q 010677 227 ----N---SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 227 ----~---~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aivDSGTs~i~lP~~ 296 (504)
. ....|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+.. ....+||||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23479999999999999999999999999999999999999999875422 2568999999999999999
Q ss_pred HHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccc
Q 010677 297 VVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINEST 376 (504)
Q Consensus 297 ~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (504)
++++|.+++++... ..
T Consensus 256 ~~~~i~~~i~~~~~--------~~-------------------------------------------------------- 271 (402)
T 3vf3_A 256 VFEAAVKSIKAASS--------TE-------------------------------------------------------- 271 (402)
T ss_dssp HHHHHHHHHHHHTT--------TS--------------------------------------------------------
T ss_pred HHHHHHHHHhhhcc--------cc--------------------------------------------------------
Confidence 99999999976510 00
Q ss_pred chhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC-CCCceEEcCCCCC-----CCceEEEEECCE------EEEeC
Q 010677 377 LCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN-PMGKSFINCDDIA-----SMPYVSFTIGNR------SFPLS 444 (504)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~-~~~~~~~~C~~~~-----~~P~l~f~~~g~------~~~l~ 444 (504)
..+. ....+.++|.... .+|+|+|+|+|. +++|+
T Consensus 272 ----------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 317 (402)
T 3vf3_A 272 ----------------------------------KFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 317 (402)
T ss_dssp ----------------------------------CCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred ----------------------------------ccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEEC
Confidence 0000 0112356887654 689999999764 59999
Q ss_pred cccceEeeccCc--ceeEEE-eeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 445 PEQYIFKIEEGH--STICIS-GFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 445 p~~yi~~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
|++|+++..+.. ...|++ ++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 318 ~~~yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 318 PQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp HHHHEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred HHHheehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 999999865432 247996 3321 23579999999999999999999999999974
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=1e-54 Score=451.18 Aligned_cols=324 Identities=27% Similarity=0.439 Sum_probs=259.5
Q ss_pred eceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecceeEEEE
Q 010677 71 YLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQISGF 150 (504)
Q Consensus 71 ~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~~~G~ 150 (504)
+|.+..+..|+++|+||||||++.|+|||||+++||++..|. .| ++.|+|++|+||+..++.|.+.|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 455566889999999999999999999999999999999885 33 6889999999999999999999999999999
Q ss_pred EEEEEEEEC-Ceeccc-cEEEEEEeeCCcccc-ccccceeeecccCcCcCC--CCCcHHHHHHHcCCCCccEEEEEecCC
Q 010677 151 FSQDNVKIG-DMIIKD-QEFVEVTKEGLLPFL-ALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQKIFSLWLNQD 225 (504)
Q Consensus 151 ~~~D~v~ig-~~~~~~-~~fg~~~~~~~~~~~-~~~~dGIlGLg~~~~s~~--~~~~~~~~L~~qg~i~~~~FSl~l~~~ 225 (504)
+++|+|+|+ +..++. +.|++.....+. |. ...++||||||++..+.. ...+++++|++|+.|+ ++||+||++.
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~-f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~ 166 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDKF-FINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGA 166 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESC-SCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCC
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCcc-cccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEeccc
Confidence 999999998 555543 567766544332 32 356799999999887643 4778999999999997 8999999863
Q ss_pred CC--------CCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeec---CCceEEEccCccCcccC
Q 010677 226 PN--------SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGP 294 (504)
Q Consensus 226 ~~--------~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aivDSGTs~i~lP 294 (504)
.- ....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.+.. ....+||||||+++++|
T Consensus 167 ~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP 246 (395)
T 2qp8_A 167 GFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLP 246 (395)
T ss_dssp SSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEE
T ss_pred cccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecC
Confidence 10 12479999999999999999999999998999999999999998875322 24679999999999999
Q ss_pred HHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCc
Q 010677 295 TTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINE 374 (504)
Q Consensus 295 ~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (504)
++++++|.+++++.... .++..
T Consensus 247 ~~~~~~l~~~i~~~~~~--------~~~~~-------------------------------------------------- 268 (395)
T 2qp8_A 247 KKVFEAAVKSIKAASST--------EKFPD-------------------------------------------------- 268 (395)
T ss_dssp HHHHHHHHHHHHHHTTT--------SCCCH--------------------------------------------------
T ss_pred HHHHHHHHHHHhhhccc--------ccCCc--------------------------------------------------
Confidence 99999999998764100 00000
Q ss_pred ccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCCC-----CCceEEEEECCE------EEEe
Q 010677 375 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIA-----SMPYVSFTIGNR------SFPL 443 (504)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~-----~~P~l~f~~~g~------~~~l 443 (504)
.....+.++|.... .+|+|+|+|+|. +++|
T Consensus 269 ---------------------------------------~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l 309 (395)
T 2qp8_A 269 ---------------------------------------GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITI 309 (395)
T ss_dssp ---------------------------------------HHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEE
T ss_pred ---------------------------------------cccccccccccccccchHhhCCcEEEEEccCCCCceEEEEE
Confidence 00011245676543 589999999764 7999
Q ss_pred CcccceEeecc--CcceeEE-EeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 444 SPEQYIFKIEE--GHSTICI-SGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 444 ~p~~yi~~~~~--~~~~~C~-~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
+|++|+++..+ .....|+ .++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 310 ~p~~yi~~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 310 LPQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp CHHHHEEEECCTTCCSCEEEEECEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred CHHHhEeecccCCCCCceEEEEEecC------CCCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 99999998653 2335897 45553 12579999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2e-53 Score=442.43 Aligned_cols=324 Identities=18% Similarity=0.237 Sum_probs=255.1
Q ss_pred ceeEece-ecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCC-----------CCCCCccccCCCCC------CCCCC
Q 010677 67 ADVVYLN-NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS-----------KCLFSISCYLHSRY------RARLS 128 (504)
Q Consensus 67 ~~~~~l~-~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~-----------~C~~~~~C~~~~~y------~~~~S 128 (504)
...+||. |+.+.+|+++|.||||||+|.|+|||||+++||+|. .|. +..|..+..| ++.+|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 4568898 788999999999999999999999999999999999 665 4568777778 55554
Q ss_pred CceeecCceEEEEec-ce-eEEEEEEEEEEEECC-----------eeccccEEEEEEeeCCccccccccceeeecccCcC
Q 010677 129 RTYTKIGVPCKIHYG-SG-QISGFFSQDNVKIGD-----------MIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDI 195 (504)
Q Consensus 129 sT~~~~~~~~~i~Yg-~g-~~~G~~~~D~v~ig~-----------~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 195 (504)
+ +....+.|.+.|+ +| .+.|.+++|+|+|++ ..++++.||++.......+....++||||||++.+
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 4556789999997 44 589999999999988 88999999999876432234467899999999865
Q ss_pred cCCCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCccEEEECccCCCCc--c-c-----ceeEEecCCc--cceEEEEee
Q 010677 196 AAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHF--R-G-----SHIYVPITEK--GYWQIKVGD 265 (504)
Q Consensus 196 s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgid~~~~--~-g-----~l~~~pv~~~--~~w~v~l~~ 265 (504)
+ +..+|. ++.+.+++||+||.+.. ...|+|+||| |+++| . | ++.|+|+... ++|.|.|++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 4 455664 45577899999998752 2479999999 99888 5 6 9999999765 899999999
Q ss_pred EEEcCeEe-eeecC--------CceEEEccCccCcccCHHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCC
Q 010677 266 ILIENSST-GFCED--------GCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQP 336 (504)
Q Consensus 266 i~v~~~~~-~~~~~--------~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 336 (504)
|.|+++.+ ..... ...+||||||++++||+++|++|.++|.+.- ..+..
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~----------~~~~~------------ 294 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL----------PKQAQ------------ 294 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS----------CGGGE------------
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh----------ccccc------------
Confidence 99999877 42211 2359999999999999999999999985430 00000
Q ss_pred CcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCC
Q 010677 337 ETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPM 416 (504)
Q Consensus 337 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 416 (504)
..+...
T Consensus 295 --------------------------------------------------------------------------~~~~~~ 300 (403)
T 3aup_A 295 --------------------------------------------------------------------------VKSVAP 300 (403)
T ss_dssp --------------------------------------------------------------------------ECCCTT
T ss_pred --------------------------------------------------------------------------cCCCCC
Confidence 000112
Q ss_pred CceEEcCCCCCCCceEEEEECC---EEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeC
Q 010677 417 GKSFINCDDIASMPYVSFTIGN---RSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDF 493 (504)
Q Consensus 417 ~~~~~~C~~~~~~P~l~f~~~g---~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~ 493 (504)
..|.++|+.+..+|+|+|+|+| .+++|+|++|+++..+ ...|+ +|...+. ...+.||||+.|||++|+|||+
T Consensus 301 ~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~ 375 (403)
T 3aup_A 301 FGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDL 375 (403)
T ss_dssp CSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEET
T ss_pred CCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEEC
Confidence 3467899877789999999987 4999999999997642 36899 7876542 1245899999999999999999
Q ss_pred CCCeEEE-Eec
Q 010677 494 GNLQIGF-AEA 503 (504)
Q Consensus 494 ~~~~iGf-a~~ 503 (504)
+|+|||| |++
T Consensus 376 ~~~rIGf~A~~ 386 (403)
T 3aup_A 376 ARSRVGFSTSS 386 (403)
T ss_dssp TTTEEEEESSC
T ss_pred CCCEEEEeccc
Confidence 9999999 775
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=7.3e-53 Score=438.49 Aligned_cols=329 Identities=18% Similarity=0.218 Sum_probs=252.1
Q ss_pred ceeEecee-cCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC-----------CCCCccccCCCCCCCCC-----CC
Q 010677 67 ADVVYLNN-YLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK-----------CLFSISCYLHSRYRARL-----SR 129 (504)
Q Consensus 67 ~~~~~l~~-~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~-----------C~~~~~C~~~~~y~~~~-----Ss 129 (504)
...+|+.. ..+.+|+++|.||||||+|.|++||||+++||+|.. |. +..|..+..|+++. ++
T Consensus 8 ~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~-s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 8 ALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCR-TSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTT-SHHHHHTTCCEEECCSSCCBT
T ss_pred cEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCC-cccccccccCCCcccccCCCC
Confidence 45566664 357899999999999999999999999999999965 44 45677777887642 34
Q ss_pred ceeecCceEEEEec-ce-eEEEEEEEEEEEEC---------CeeccccEEEEEEeeCCccccccccceeeecccCcCcCC
Q 010677 130 TYTKIGVPCKIHYG-SG-QISGFFSQDNVKIG---------DMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG 198 (504)
Q Consensus 130 T~~~~~~~~~i~Yg-~g-~~~G~~~~D~v~ig---------~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~ 198 (504)
++...+|.|.+.|+ +| ++.|++++|+|+|+ ++.++++.|||+..+.... ....+|||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 56666789999995 65 47999999999997 2678899999998753211 23568999999998765
Q ss_pred CCCcHHHHHHHcCCCCccEEEEEecCCCCCCCccEEEECccCCCC-----cccc-eeEEecCCc--------------cc
Q 010677 199 NATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRH-----FRGS-HIYVPITEK--------------GY 258 (504)
Q Consensus 199 ~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgid~~~-----~~g~-l~~~pv~~~--------------~~ 258 (504)
+..+|.+++.+ +++||+||.+. ...+|+|+|||+|..+ +.|+ ++|+|+... .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 67889999888 89999999884 2347999999998753 7888 999999764 69
Q ss_pred eEEEEeeEEEcCeEeeeec--------CCceEEEccCccCcccCHHHHHHHHHHhccccccccccchhhhhcchhhHhhh
Q 010677 259 WQIKVGDILIENSSTGFCE--------DGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFL 330 (504)
Q Consensus 259 w~v~l~~i~v~~~~~~~~~--------~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~ 330 (504)
|.|+|++|+|+++.+.... +++.+||||||++++||+++|++|.++|.+... ...+
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~--------~~~~-------- 300 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA--------ARNI-------- 300 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHH--------HTTC--------
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhc--------ccCC--------
Confidence 9999999999999876432 357899999999999999999999999865400 0000
Q ss_pred hcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhc
Q 010677 331 ISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCE 410 (504)
Q Consensus 331 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 410 (504)
....+. ... ..|+
T Consensus 301 -~~~~~~---~~~---------------------------------------------------------------~~C~ 313 (413)
T 3vla_A 301 -TRVASV---APF---------------------------------------------------------------GACF 313 (413)
T ss_dssp -CEECCC---TTC---------------------------------------------------------------SCEE
T ss_pred -CcCCCC---CCC---------------------------------------------------------------ccee
Confidence 000000 000 1222
Q ss_pred cCCCCCCceEEcCCC----CCCCceEEEEECC--EEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhh
Q 010677 411 VLPNPMGKSFINCDD----IASMPYVSFTIGN--RSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFL 484 (504)
Q Consensus 411 ~~~~~~~~~~~~C~~----~~~~P~l~f~~~g--~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl 484 (504)
.. +|.. ...+|+|+|+|+| ++|+|+|++|+++..+ ...|+ +|...+. ..++.||||+.||
T Consensus 314 ~~---------~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~~~~~IlGd~fl 379 (413)
T 3vla_A 314 ST---------DNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NLRTSIVIGGHQL 379 (413)
T ss_dssp EC---------TTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SCSSSEEECHHHH
T ss_pred cc---------CCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--CcccceeEehhhh
Confidence 22 1111 1278999999987 8999999999998653 36898 5765542 1246899999999
Q ss_pred ccEEEEEeCCCCeEEEEec
Q 010677 485 RAYHTVFDFGNLQIGFAEA 503 (504)
Q Consensus 485 ~~~y~vfD~~~~~iGfa~~ 503 (504)
|++|+|||++|+|||||++
T Consensus 380 ~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 380 EDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred cCeEEEEECCCCEEEEEEe
Confidence 9999999999999999986
No 33
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=5.3e-50 Score=413.69 Aligned_cols=323 Identities=18% Similarity=0.242 Sum_probs=237.8
Q ss_pred eEece-ecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC--------CCCCccccCCCCCCCCCCCcee-------
Q 010677 69 VVYLN-NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--------CLFSISCYLHSRYRARLSRTYT------- 132 (504)
Q Consensus 69 ~~~l~-~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~--------C~~~~~C~~~~~y~~~~SsT~~------- 132 (504)
.+||. ++.+.+|+++|.|||| |+|||||+++||+|.. |. +..|..+..|++.. .++.
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~-s~~C~~~~~~~~~s-c~~~~~~~~~~ 76 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCS-SPTCLLANAYPAPG-CPAPSCGSDKH 76 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTT-SHHHHHHHSSCCTT-CCCCCC-----
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCC-CchhccccCCCCCC-CCCccCCcCcC
Confidence 46777 7789999999999998 9999999999999954 43 34677667787753 3332
Q ss_pred ecCc-eEEEEecceeE-EEEEEEEEEEECC----eecccc----EEEEEEeeCCccccccccceeeecccCcCcCCCCCc
Q 010677 133 KIGV-PCKIHYGSGQI-SGFFSQDNVKIGD----MIIKDQ----EFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATP 202 (504)
Q Consensus 133 ~~~~-~~~i~Yg~g~~-~G~~~~D~v~ig~----~~~~~~----~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 202 (504)
...| .|.+.|++|+. .|.+++|+|++++ ..++++ .|||+.......+ ...+|||||||++.++
T Consensus 77 ~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------ 149 (381)
T 1t6e_X 77 DKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------ 149 (381)
T ss_dssp -CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------
T ss_pred CCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------
Confidence 1234 58999999985 8999999999984 566665 5699876522222 3577999999997654
Q ss_pred HHHHHHHcCCCCccEEEEEecCCCCCCCccEEEECccCCC--CcccceeEEecCCc---cceEEEEeeEEEcCeEeeeec
Q 010677 203 LWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWR--HFRGSHIYVPITEK---GYWQIKVGDILIENSSTGFCE 277 (504)
Q Consensus 203 ~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGgid~~--~~~g~l~~~pv~~~---~~w~v~l~~i~v~~~~~~~~~ 277 (504)
+..+|.++++ .+++||+||.+. .+|+|+|||+|.. ++.|++.|+|+... .+|.|.|++|+|+++.+....
T Consensus 150 ~~~ql~~~~~-~~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~ 224 (381)
T 1t6e_X 150 LPAQVASAQK-VANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPE 224 (381)
T ss_dssp HHHHHHHHHT-CCSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCT
T ss_pred hHHHHhhhcc-cCceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCH
Confidence 6678988885 479999999875 3799999998765 58999999999753 467799999999998875433
Q ss_pred C---CceEEEccCccCcccCHHHHHHHHHHhccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCccc
Q 010677 278 D---GCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYM 354 (504)
Q Consensus 278 ~---~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 354 (504)
. ++.+||||||++++||+++|++|.+++.+.. .... .++.
T Consensus 225 ~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~---------~~~~-------------------------~~g~--- 267 (381)
T 1t6e_X 225 GALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL---------AAQH-------------------------ANGA--- 267 (381)
T ss_dssp TCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH---------HHC---------------------------------
T ss_pred HHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh---------cccc-------------------------cccc---
Confidence 2 4579999999999999999999999886540 0000 0000
Q ss_pred ccceeeeeecccCCCCCCCcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCCC--------
Q 010677 355 STGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDI-------- 426 (504)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~-------- 426 (504)
... ... ....+..+|...
T Consensus 268 --~~~---------------------------------------------------~~~-~~~~~~~~C~~~~~~~~~~~ 293 (381)
T 1t6e_X 268 --PVA---------------------------------------------------RAV-EAVAPFGVCYDTKTLGNNLG 293 (381)
T ss_dssp ----C---------------------------------------------------CEE-CCCTTCSCEEEGGGCCEETT
T ss_pred --ccc---------------------------------------------------ccC-CCCCCCCccCCCCCCccccc
Confidence 000 000 000011233322
Q ss_pred -CCCceEEEEEC-CEEEEeCcccceEeeccCcceeEEEeeEeccCC---CCCCCeEEeCHhhhccEEEEEeCCCCeEEEE
Q 010677 427 -ASMPYVSFTIG-NRSFPLSPEQYIFKIEEGHSTICISGFIALDVP---PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFA 501 (504)
Q Consensus 427 -~~~P~l~f~~~-g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~---~~~~~~~ILG~~fl~~~y~vfD~~~~~iGfa 501 (504)
..+|+|+|+|+ |++++|++++|+++..+ ...|+ +|...+.+ .+.++.||||+.|||++|+|||++|+|||||
T Consensus 294 ~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riGfA 370 (381)
T 1t6e_X 294 GYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLGFS 370 (381)
T ss_dssp EECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred CCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEEEe
Confidence 26899999997 59999999999997643 36898 57765421 1123589999999999999999999999999
Q ss_pred ecC
Q 010677 502 EAA 504 (504)
Q Consensus 502 ~~~ 504 (504)
+++
T Consensus 371 ~~~ 373 (381)
T 1t6e_X 371 RLP 373 (381)
T ss_dssp ECC
T ss_pred ccc
Confidence 974
No 34
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-49 Score=381.98 Aligned_cols=238 Identities=56% Similarity=1.031 Sum_probs=217.5
Q ss_pred ceeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee
Q 010677 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ 146 (504)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~ 146 (504)
...+||.|+.+.+|+++|.||||||++.|++||||+++||+|..|.....|..++.|+|++|+||+..++.+.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 45689999999999999999999999999999999999999999964557999999999999999999999999999999
Q ss_pred EEEEEEEEEEEECCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCC
Q 010677 147 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDP 226 (504)
Q Consensus 147 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~ 226 (504)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||+|++++||+||.+..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998876544556778999999998765 67889999999999999999998864
Q ss_pred CCCCccEEEECccCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhc
Q 010677 227 NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 306 (504)
Q Consensus 227 ~~~~~G~L~fGgid~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~ 306 (504)
+....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+.++..++.+||||||+++++|.+++++|.++++
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 33458999999999999999999999998899999999999999987666677899999999999999999999999997
Q ss_pred cc
Q 010677 307 AE 308 (504)
Q Consensus 307 ~~ 308 (504)
+.
T Consensus 238 a~ 239 (239)
T 1b5f_A 238 AN 239 (239)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.4e-45 Score=355.43 Aligned_cols=241 Identities=40% Similarity=0.860 Sum_probs=211.0
Q ss_pred CCeeccccEEEEEEeeCCccccccccceeeecccCcCcCCCCCcHHHHHHHcCCCCccEEEEEecCCCCCCCccEEEECc
Q 010677 159 GDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGG 238 (504)
Q Consensus 159 g~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FSl~l~~~~~~~~~G~L~fGg 238 (504)
|+++++++.||+++...+..|....++||||||++..+.....+++++|++||.|++++||+||++.......|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999877655666788999999999887667789999999999999999999999864333479999999
Q ss_pred cCCCCcccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHHHHHHHhccccccccccchh
Q 010677 239 FDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTV 318 (504)
Q Consensus 239 id~~~~~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~~l~~~l~~~~~~~~~c~~~ 318 (504)
+|+++|+|++.|+|+.+.++|.|.+++|+|+++.+. +..++.+++||||+++++|.+++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998752 5677899999999999999999999999987650
Q ss_pred hhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHHHHHHHHhhhhhH
Q 010677 319 VFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTK 398 (504)
Q Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 398 (504)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhhccCCCCCCceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEE
Q 010677 399 EAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWV 478 (504)
Q Consensus 399 ~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~I 478 (504)
...|.|.+||+.+..+|+|+|+|+|++++|+|++|+++..+.+...|+++|+..+.+.+.++.||
T Consensus 151 ---------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 151 ---------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp ---------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred ---------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 11356899999878899999999999999999999998764445689999988765444567899
Q ss_pred eCHhhhccEEEEEeCCCCeEEEEecC
Q 010677 479 LGDMFLRAYHTVFDFGNLQIGFAEAA 504 (504)
Q Consensus 479 LG~~fl~~~y~vfD~~~~~iGfa~~~ 504 (504)
||++|||++|+|||++++|||||+++
T Consensus 216 lG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 216 LGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred echHHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999985
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=5.4e-24 Score=175.17 Aligned_cols=93 Identities=58% Similarity=1.058 Sum_probs=87.1
Q ss_pred eeEeceecCCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCC-CccccCCCCCCCCCCCceeecCceEEEEeccee
Q 010677 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLF-SISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ 146 (504)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~ 146 (504)
..+||.|+.+..|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|+|++|+||+..++.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 4589999999999999999999999999999999999999999962 147998999999999999999999999999999
Q ss_pred EEEEEEEEEEEECC
Q 010677 147 ISGFFSQDNVKIGD 160 (504)
Q Consensus 147 ~~G~~~~D~v~ig~ 160 (504)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.85 E-value=3.1e-21 Score=155.78 Aligned_cols=87 Identities=59% Similarity=1.129 Sum_probs=77.1
Q ss_pred CceEEcCCCCCCCceEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhccEEEEEeCCCC
Q 010677 417 GKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNL 496 (504)
Q Consensus 417 ~~~~~~C~~~~~~P~l~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~fl~~~y~vfD~~~~ 496 (504)
|.|.+||+.++++|+|+|+|+|++++|+|++|+++...++...|+++|+..+.+ +.++.||||++|||++|+|||.+|+
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 568999998889999999999999999999999987554456899999987654 4456899999999999999999999
Q ss_pred eEEEEecC
Q 010677 497 QIGFAEAA 504 (504)
Q Consensus 497 ~iGfa~~~ 504 (504)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999985
No 38
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.48 E-value=7.9e-15 Score=122.50 Aligned_cols=106 Identities=53% Similarity=1.025 Sum_probs=76.2
Q ss_pred cccccccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccchhhhhHHHH
Q 010677 307 AEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVF 386 (504)
Q Consensus 307 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (504)
|.|.++..|+.++++|+..|++.|++.++|..+|.++|+|..++...++.+++.++.+.. ..++..+...|.+|+|++.
T Consensus 3 a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~-~~~~~~~~~~C~~Ce~~V~ 81 (108)
T 3rfi_A 3 AMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERET-EGSSVGEAPLCTACEMAVV 81 (108)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccc-ccccCCCCCcChhHHHHHH
Confidence 445667889999999999999999999999999999999999887767777777776642 1122136788999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHhhhhccCC
Q 010677 387 WIQMQLKQQKTKEAIFKYADKLCEVLP 413 (504)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~c~~~~ 413 (504)
|+++.|+++.|+++|+++++++|..+|
T Consensus 82 ~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 82 WMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999875
No 39
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=96.48 E-value=0.0019 Score=49.93 Aligned_cols=40 Identities=28% Similarity=0.635 Sum_probs=37.6
Q ss_pred ccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010677 375 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 414 (504)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 414 (504)
...|..|++++.|+++.++++.|+++|.++++++|..+|.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 41 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD 41 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCG
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCC
Confidence 4579999999999999999999999999999999999985
No 40
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=96.40 E-value=0.0023 Score=50.91 Aligned_cols=42 Identities=29% Similarity=0.604 Sum_probs=39.0
Q ss_pred cccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCC
Q 010677 374 ESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNP 415 (504)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 415 (504)
+...|..|++++.|+++.++.+.|+++|.++++++|..+|..
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~ 45 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS 45 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC
Confidence 457899999999999999999999999999999999999864
No 41
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=96.39 E-value=0.003 Score=49.31 Aligned_cols=41 Identities=37% Similarity=0.636 Sum_probs=38.1
Q ss_pred ccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCC
Q 010677 375 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNP 415 (504)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 415 (504)
+..|..|++++.|+++.++.+.|+++|.++++++|..+|..
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 45799999999999999999999999999999999999853
No 42
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=95.26 E-value=0.016 Score=45.08 Aligned_cols=41 Identities=29% Similarity=0.615 Sum_probs=37.6
Q ss_pred cccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010677 374 ESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 414 (504)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 414 (504)
++..|..|++++.+++..++.+.++++|.+.+.++|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 45689999999999999999999999999999999998873
No 43
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.74 E-value=0.05 Score=47.07 Aligned_cols=92 Identities=23% Similarity=0.276 Sum_probs=54.1
Q ss_pred CCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEeccee--EEEEEEE
Q 010677 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSGQ--ISGFFSQ 153 (504)
Q Consensus 76 ~~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g~--~~G~~~~ 153 (504)
....+++++.|+. +++++++|||++.+.+...... .++-....+.. +. ....|.|. ..|.+..
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~~----~~------~~a~g~g~~~~~~~~~~ 87 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDKR----FI------GEARGVGTGKIIGRIHQ 87 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBCC----CC-----------------CEEEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccCHHHHH---HcCCCccCCcc----eE------EEEecCCCcccccEEEE
Confidence 4678999999987 8999999999999988533211 22211111111 10 01122222 3566677
Q ss_pred EEEEECCeeccccEEEEEEeeCCccccccccceeeeccc
Q 010677 154 DNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGF 192 (504)
Q Consensus 154 D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~ 192 (504)
+.+.+|+...+ ..|.+.. . +.+||||+.+
T Consensus 88 ~~i~ig~~~~~-~~~~vl~--~-------~~d~iLG~d~ 116 (148)
T 2i1a_A 88 AQVKIETQYIP-CSFTVLD--T-------DIDVLIGLDM 116 (148)
T ss_dssp EEEEETTEEEE-EEEEEEC--S-------SCSEEECHHH
T ss_pred EEEEECCEEec-eeEEEec--C-------CCCeEecHHH
Confidence 89999997754 5554432 1 3589999873
No 44
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=94.66 E-value=0.022 Score=43.34 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=35.6
Q ss_pred cchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010677 376 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 414 (504)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 414 (504)
..|..|++++..++..+ .+.|+++|.+.++++|..+|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 36999999999999999 999999999999999999874
No 45
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=94.64 E-value=0.032 Score=43.12 Aligned_cols=40 Identities=23% Similarity=0.371 Sum_probs=37.5
Q ss_pred ccchhhhhHHHHHHHHHHhhhhhH-HHHHHHHhhhhccCCC
Q 010677 375 STLCAFCEMIVFWIQMQLKQQKTK-EAIFKYADKLCEVLPN 414 (504)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~ 414 (504)
...|..|++++..+++.+..+.|+ ++|.+++.+.|..+|.
T Consensus 3 ~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~ 43 (81)
T 1n69_A 3 GDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 43 (81)
T ss_dssp CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT
T ss_pred CCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc
Confidence 457999999999999999999999 9999999999999984
No 46
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=94.47 E-value=0.024 Score=43.55 Aligned_cols=39 Identities=18% Similarity=0.411 Sum_probs=36.7
Q ss_pred cchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010677 376 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 414 (504)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 414 (504)
..|..|++++..+++-+..+.|+++|.+.+++.|..+|.
T Consensus 2 ~~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 2 YFCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp CHHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred CcchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 369999999999999999999999999999999999874
No 47
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=94.33 E-value=0.022 Score=43.61 Aligned_cols=40 Identities=18% Similarity=0.414 Sum_probs=36.5
Q ss_pred ccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCC
Q 010677 375 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNP 415 (504)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 415 (504)
...|..|++++..+++-+..+ |+++|.++++++|..+|..
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 357999999999999999999 9999999999999998743
No 48
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=91.82 E-value=0.41 Score=41.18 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=23.4
Q ss_pred eEEeCHhhhccEEEEEeCCCCeEEEE
Q 010677 476 LWVLGDMFLRAYHTVFDFGNLQIGFA 501 (504)
Q Consensus 476 ~~ILG~~fl~~~y~vfD~~~~~iGfa 501 (504)
..|||..||+++-...|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 46999999999999999999998773
No 49
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=91.57 E-value=0.035 Score=43.89 Aligned_cols=39 Identities=41% Similarity=0.713 Sum_probs=34.7
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCcceeeC
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYN 349 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 349 (504)
+...|+.++++|+..|++.|.+..+|+.+|..+|+|.-+
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 578899999999999999999999999999999999765
No 50
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.51 E-value=0.24 Score=42.90 Aligned_cols=92 Identities=15% Similarity=0.266 Sum_probs=55.1
Q ss_pred CceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccccCCCCCCCCCCCceeecCceEEEEecce--eEEEEEEEE
Q 010677 77 DAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIGVPCKIHYGSG--QISGFFSQD 154 (504)
Q Consensus 77 ~~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g--~~~G~~~~D 154 (504)
-..|++++.|.. +++++++|||++.+.+...... .|+-...-+. . +. ....+-| ...|.+...
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~-~---~~------~~a~g~G~~~~~g~v~~~ 86 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR-R---WA------GVAKGVGTQRIIGRVHLA 86 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG-G---GC------EECCC---CEEEEEEEEE
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc-c---ee------EEEEcCCccEEEEEEEEE
Confidence 457999999987 9999999999999998643221 2321111000 0 00 0111222 246777778
Q ss_pred EEEECCeeccccEEEEEEeeCCccccccccceeeeccc
Q 010677 155 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGF 192 (504)
Q Consensus 155 ~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~dGIlGLg~ 192 (504)
.+++|+..++ ..|.+.. ....|+||||-+
T Consensus 87 ~I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD~ 115 (148)
T 3s8i_A 87 QIQIEGDFLQ-CSFSILE--------DQPMDMLLGLDM 115 (148)
T ss_dssp EEEETTEEEE-EEEEEET--------TCSSSEEECHHH
T ss_pred EEEECCEEEE-EEEEEeC--------CCCcCeeccHHH
Confidence 9999997653 3443332 123489999873
No 51
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=90.98 E-value=0.071 Score=42.90 Aligned_cols=51 Identities=24% Similarity=0.352 Sum_probs=41.7
Q ss_pred CcccchhhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEcCCC
Q 010677 373 NESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDD 425 (504)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~ 425 (504)
.+...|..|++++..+++-+ +.|+++|.+.+++.|..+|.....+.-.|..
T Consensus 19 ~~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~ 69 (99)
T 2js9_A 19 RSALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDH 69 (99)
T ss_dssp CCSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHT
T ss_pred CCCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 36788999999999999999 8899999999999999988442334445654
No 52
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=90.33 E-value=0.064 Score=43.17 Aligned_cols=38 Identities=24% Similarity=0.416 Sum_probs=35.3
Q ss_pred ccccccchhhhhcchhhHhhhhcCCCCCcccccCccee
Q 010677 310 IVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 347 (504)
Q Consensus 310 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 347 (504)
++...|+.++++|...|.+.|.+...|+.+|..+++|+
T Consensus 62 f~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 62 FGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp THHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 35678999999999999999999999999999999994
No 53
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=89.86 E-value=0.8 Score=39.55 Aligned_cols=26 Identities=19% Similarity=0.149 Sum_probs=23.3
Q ss_pred eEEeCHhhhccEEEEEeCCCCeEEEE
Q 010677 476 LWVLGDMFLRAYHTVFDFGNLQIGFA 501 (504)
Q Consensus 476 ~~ILG~~fl~~~y~vfD~~~~~iGfa 501 (504)
..|||..||+++-.+.|+.++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 46999999999999999999998763
No 54
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=89.79 E-value=0.045 Score=41.89 Aligned_cols=37 Identities=35% Similarity=0.676 Sum_probs=34.8
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCccee
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 347 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 347 (504)
+...|+.++++|+..|++.+.++.+|+.+|..+|+|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 5778999999999999999999999999999999994
No 55
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=87.43 E-value=0.099 Score=40.38 Aligned_cols=37 Identities=43% Similarity=0.783 Sum_probs=34.4
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCccee
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 347 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 347 (504)
+...|+.+++.|...|++.+.++.+|..+|..+|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 4567999999999999999999999999999999994
No 56
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=87.14 E-value=0.1 Score=39.91 Aligned_cols=37 Identities=24% Similarity=0.554 Sum_probs=34.7
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCccee
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 347 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 347 (504)
+...|+.++++|...|.+.|.++..|+.+|.++++|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 4678999999999999999999999999999999994
No 57
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=85.76 E-value=0.11 Score=39.57 Aligned_cols=36 Identities=17% Similarity=0.392 Sum_probs=33.9
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCcce
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLC 346 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 346 (504)
+...|+.++++|...|.+.+.+...|+.+|..+|+|
T Consensus 42 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 42 IATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp THHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 567799999999999999999999999999999988
No 58
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=80.83 E-value=0.18 Score=38.94 Aligned_cols=36 Identities=33% Similarity=0.655 Sum_probs=33.2
Q ss_pred ccccchhhhhcchhhHhhhhcC-CCCCcccccCccee
Q 010677 312 SMQCKTVVFEYGNMIWEFLISG-VQPETVCSDIGLCV 347 (504)
Q Consensus 312 ~~~c~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~c~ 347 (504)
...|+.+++.|+..|.+.+.+. .+|+.+|..+|+|.
T Consensus 46 ~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 46 SASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 5689999999999999999998 59999999999994
No 59
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=80.68 E-value=0.22 Score=38.24 Aligned_cols=36 Identities=22% Similarity=0.695 Sum_probs=31.1
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccCccee
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 347 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 347 (504)
+...|+.++++|+..+.+.+. ..+|+.+|.++|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 567899999999997776555 799999999999994
No 60
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=77.51 E-value=2.7 Score=33.47 Aligned_cols=30 Identities=23% Similarity=0.269 Sum_probs=25.4
Q ss_pred EEEEEecCCCceEEEEEcCCCCCeeEeCCCCC
Q 010677 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCL 112 (504)
Q Consensus 81 ~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~ 112 (504)
++.+.||. |.++.++|||.+++.+...+.+
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~p 39 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEMSLP 39 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCCSSC
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecccCC
Confidence 46789998 9999999999999999765543
No 61
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=77.27 E-value=0.5 Score=35.70 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=30.1
Q ss_pred cccccchhhhhcchhhHhhhhcCCCCCcccccC
Q 010677 311 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDI 343 (504)
Q Consensus 311 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 343 (504)
+...|+.++++|+..|.+.|..+..|..+|.++
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 456799999999999999999999999999775
No 62
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=74.60 E-value=2.9 Score=33.63 Aligned_cols=28 Identities=18% Similarity=0.256 Sum_probs=24.2
Q ss_pred eEEEEEEecCCCceEEEEEcCCCCCeeEeC
Q 010677 79 QYYGEIGIGSPPQSFSVVFDTGSSNLWVPS 108 (504)
Q Consensus 79 ~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~ 108 (504)
.-++.|.||. |.++.++|||..++.+..
T Consensus 8 RP~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 3457799997 999999999999999974
No 63
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=72.30 E-value=3.5 Score=33.63 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=26.4
Q ss_pred EEEEEec---CCCceEEEEEcCCCCCeeEeCCCCC
Q 010677 81 YGEIGIG---SPPQSFSVVFDTGSSNLWVPSSKCL 112 (504)
Q Consensus 81 ~~~i~iG---tP~Q~~~v~vDTGSs~~WV~~~~C~ 112 (504)
.+.|.|| +|+|.++.++|||.+++.+...+++
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 4556666 7789999999999999999876664
No 64
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=72.26 E-value=4.3 Score=32.29 Aligned_cols=29 Identities=24% Similarity=0.239 Sum_probs=24.9
Q ss_pred EEEEEecCCCceEEEEEcCCCCCeeEeCCCC
Q 010677 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 111 (504)
Q Consensus 81 ~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C 111 (504)
++.+.||. |.++.++|||.+++.+...+.
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 56789998 999999999999999975544
No 65
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=67.57 E-value=3.4 Score=27.32 Aligned_cols=23 Identities=17% Similarity=0.094 Sum_probs=19.5
Q ss_pred ceEEEeeeeeccchhhhHHhccc
Q 010677 31 GLLRIQLKKRQLGINTINAARLI 53 (504)
Q Consensus 31 ~~~~ipL~~~~~~~~~~~~~~~~ 53 (504)
+++||||+|.++.++++.+.+..
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~ 29 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVD 29 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCC
T ss_pred ceeEEeeeecccHHHHHHHcCch
Confidence 56899999999999998887643
No 66
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=66.46 E-value=1.3 Score=34.38 Aligned_cols=50 Identities=22% Similarity=0.321 Sum_probs=39.6
Q ss_pred HHHHHHHHh-ccccccccccchhhhhcchhhHhhhhcCCCCCcccccCcce
Q 010677 297 VVAQINHAI-GAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLC 346 (504)
Q Consensus 297 ~~~~l~~~l-~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 346 (504)
.+++.=..+ ++.++....|+.++..|...|.+.|.++..|+++|..++.|
T Consensus 37 ~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 37 EFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 334443333 44555678899999999999999999999999999988766
No 67
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=59.92 E-value=7.9 Score=31.72 Aligned_cols=28 Identities=14% Similarity=0.101 Sum_probs=23.5
Q ss_pred EEEEEEecCCCceEEEEEcCCCCCeeEeCCC
Q 010677 80 YYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (504)
Q Consensus 80 Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~ 110 (504)
=++ |.||. |.++.++|||.+++.+...+
T Consensus 15 P~v-ikI~G--q~~eaLLDTGAD~TVi~~~~ 42 (116)
T 2hah_A 15 EIL-IFVNG--YPIKFLLDTGADITVLNRRD 42 (116)
T ss_dssp EEE-EEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred CEE-EEECC--EEEEEEecCCCCcEEEcccc
Confidence 344 99997 99999999999999997543
No 68
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=59.72 E-value=4.4 Score=24.82 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=16.9
Q ss_pred ceEEEeeeeeccchhhhHHhc
Q 010677 31 GLLRIQLKKRQLGINTINAAR 51 (504)
Q Consensus 31 ~~~~ipL~~~~~~~~~~~~~~ 51 (504)
+++||||++.++.++.+.+.+
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g 22 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARS 22 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcc
Confidence 478999999998887776644
No 69
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=58.15 E-value=9.7 Score=31.06 Aligned_cols=30 Identities=10% Similarity=0.105 Sum_probs=25.5
Q ss_pred EEEEEecCCCceEEEEEcCCCCCeeEeCCCCC
Q 010677 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCL 112 (504)
Q Consensus 81 ~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C~ 112 (504)
.+.+.||. |.++.++|||.+++.+...+.+
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~lp 40 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLEDWP 40 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGGSC
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecccCC
Confidence 56788887 9999999999999999866553
No 70
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=56.60 E-value=6 Score=25.56 Aligned_cols=21 Identities=24% Similarity=0.290 Sum_probs=17.3
Q ss_pred eEEEeeeeeccchhhhHHhcc
Q 010677 32 LLRIQLKKRQLGINTINAARL 52 (504)
Q Consensus 32 ~~~ipL~~~~~~~~~~~~~~~ 52 (504)
++||||+|.++.++.+.+.+.
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~ 22 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGL 22 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTC
T ss_pred eEEEeeeEcchHHHHHHHcCc
Confidence 689999999998888777553
No 71
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=51.71 E-value=16 Score=30.54 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=26.0
Q ss_pred ceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC
Q 010677 78 AQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (504)
Q Consensus 78 ~~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~ 110 (504)
..-++.+.|+. |.++.++|||.+++.+...+
T Consensus 21 ~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 21 PEPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CSSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 35567799998 99999999999999997543
No 72
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=41.92 E-value=23 Score=29.24 Aligned_cols=25 Identities=12% Similarity=0.161 Sum_probs=20.4
Q ss_pred ecCCCceEEEEEcCCCCCeeEeCCCCC
Q 010677 86 IGSPPQSFSVVFDTGSSNLWVPSSKCL 112 (504)
Q Consensus 86 iGtP~Q~~~v~vDTGSs~~WV~~~~C~ 112 (504)
||. |.++.++|||.+++.+...+.+
T Consensus 27 i~g--q~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 27 QRS--VYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp CSE--EEEEEEECTTCSSCEEETTTSC
T ss_pred CCC--EEEEEEecCCCCcEEEecccCC
Confidence 554 7789999999999999876553
No 73
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=39.58 E-value=24 Score=31.85 Aligned_cols=30 Identities=23% Similarity=0.286 Sum_probs=25.1
Q ss_pred eEEEEEEecCCCceEEEEEcCCCCCeeEeCCC
Q 010677 79 QYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (504)
Q Consensus 79 ~Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~ 110 (504)
.-.+.|.||. |.++.++|||.+++.+...+
T Consensus 8 RP~vtv~I~G--q~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 8 RPLVTIRIGG--QLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCeEEEEECC--EEEEEEEecCCCceEEeccc
Confidence 3467899998 99999999999999996543
No 74
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=36.54 E-value=35 Score=32.83 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=30.2
Q ss_pred ccceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 245 RGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 245 ~g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
.|.+...|+.....|.+. |.||.+.+ .+++|||++.+++|..
T Consensus 3 ~g~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 3 SGVATNTPTANDEEYITP---VTIGGTTL-------NLNFDTGSADLWVFST 44 (323)
T ss_dssp CEEEEEEECGGGSCEEEE---EEETTEEE-------EEEEETTCCCEEECBT
T ss_pred CCceeeeecCCCCEEEEE---EEECCEEE-------EEEEeCCCcceEEecC
Confidence 355666677666667654 56774443 4999999999999964
No 75
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=35.40 E-value=27 Score=27.30 Aligned_cols=32 Identities=25% Similarity=0.306 Sum_probs=21.3
Q ss_pred cceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 257 GYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 257 ~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
..|.+ .|.||... ....++||||++.+++|..
T Consensus 13 ~~Y~~---~i~iGTP~-----Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 13 AQYYG---EIGIGTPP-----QCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TEEEE---EEEETTTT-----EEEEEEEETTCCCEEEEBT
T ss_pred CeEEE---EEEECCCC-----eEEEEEEeCCCCceEEeEc
Confidence 34544 36676321 2245999999999999853
No 76
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=34.99 E-value=37 Score=32.69 Aligned_cols=41 Identities=17% Similarity=0.212 Sum_probs=29.5
Q ss_pred cceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 246 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 246 g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
|.+...|+.....|.+. |.||.+.+ .+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKSTL-------HLDFDTGSADLWVFSD 43 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEEE-------EEEEETTCCCEEEECT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEEE-------EEEEeCCCccceEeeC
Confidence 45566676666667654 56774443 4999999999999864
No 77
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=33.39 E-value=42 Score=32.27 Aligned_cols=41 Identities=15% Similarity=0.191 Sum_probs=29.3
Q ss_pred cceeEEecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 246 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 246 g~l~~~pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
|.+...|+.....|.+. |.||.+.+ .+++|||++.+++|..
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q~~-------~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDDTL-------GLDFDTGSADLWVFSS 44 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTEEE-------EEEEETTCCCEEECBT
T ss_pred CceeeeEcCCCCEEEEE---EEECCEEE-------EEEEcCCCcceEEecC
Confidence 55566666666667654 56774443 4999999999999965
No 78
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=24.24 E-value=85 Score=28.57 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=27.2
Q ss_pred eEeceecCCceEEEE---EEecCC-----CceEEEEEcCCCCCeeEeCC
Q 010677 69 VVYLNNYLDAQYYGE---IGIGSP-----PQSFSVVFDTGSSNLWVPSS 109 (504)
Q Consensus 69 ~~~l~~~~~~~Y~~~---i~iGtP-----~Q~~~v~vDTGSs~~WV~~~ 109 (504)
.+|+.. ...|.+. |.||.- .....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 455544 3456554 778862 34578999999999999854
No 79
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=23.98 E-value=77 Score=30.39 Aligned_cols=43 Identities=16% Similarity=0.076 Sum_probs=27.6
Q ss_pred cceeEE-ecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 246 GSHIYV-PITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 246 g~l~~~-pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
|.+.-. |...+..|.+ .|.||... ....+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP~-----Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLDDAYIT---PVQIGTPA-----QTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTTT-----EEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCCCEEEE---EEEECCCC-----eEEEEEECCCCCCeEEecC
Confidence 344445 5555556655 46777321 2235999999999999964
No 80
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=23.53 E-value=66 Score=31.26 Aligned_cols=44 Identities=18% Similarity=0.175 Sum_probs=28.9
Q ss_pred ccceeEEecCC--ccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 245 RGSHIYVPITE--KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 245 ~g~l~~~pv~~--~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
+|.+..+|+.. ...|.+. |.||... ....++||||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP~-----q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTPG-----QDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTTT-----EEEEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCCC-----cEEEEEEcCCCCCeEECCC
Confidence 45666777754 4456554 5677321 1235999999999999864
No 81
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=22.60 E-value=85 Score=30.07 Aligned_cols=43 Identities=16% Similarity=0.078 Sum_probs=27.4
Q ss_pred cceeEE-ecCCccceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHH
Q 010677 246 GSHIYV-PITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 246 g~l~~~-pv~~~~~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
|.+.-. |...+..|.+ .|.||... ....+++|||++.+++|..
T Consensus 3 ~~v~~~~~~~~~~~Y~~---~i~iGTP~-----Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYIT---SVSIGTPA-----QVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTCCCEEE---EEEETTTT-----EEEEEEEETTCCCEEECBT
T ss_pred cceeeecCCCCCCEEEE---EEEECCCC-----eEEEEEEcCCCCCeEEecC
Confidence 344445 4445556654 46777321 2235999999999999964
No 82
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=22.58 E-value=77 Score=31.42 Aligned_cols=44 Identities=18% Similarity=0.180 Sum_probs=28.1
Q ss_pred CceeEeceecCCceEEEE---EEecCC------CceE--------EEEEcCCCCCeeEeCC
Q 010677 66 KADVVYLNNYLDAQYYGE---IGIGSP------PQSF--------SVVFDTGSSNLWVPSS 109 (504)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~---i~iGtP------~Q~~--------~v~vDTGSs~~WV~~~ 109 (504)
....+|+.......|.+. |.||.- +..+ .+++|||++.+.+|..
T Consensus 216 ~l~~~Pl~~~~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~ 276 (403)
T 3aup_A 216 DLAFTPLTITLQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQS 276 (403)
T ss_dssp TEEEEECEECTTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHH
T ss_pred ceeecccccCCCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHH
Confidence 345577765433567764 778861 1112 1899999999999864
No 83
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=22.11 E-value=46 Score=26.52 Aligned_cols=34 Identities=18% Similarity=0.186 Sum_probs=25.6
Q ss_pred eEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCHHHHH
Q 010677 259 WQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVA 299 (504)
Q Consensus 259 w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~~~~~ 299 (504)
|+=.+-.+.|+|+.. .+++|||+-.+.+......
T Consensus 6 ~~RP~v~v~I~Gq~~-------e~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPL-------NVLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEE-------EEEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEE-------EEEeccCCCcEEEccccCc
Confidence 443445588888865 3999999999999976653
No 84
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=21.34 E-value=95 Score=27.87 Aligned_cols=30 Identities=23% Similarity=0.253 Sum_probs=25.1
Q ss_pred EEEEEEecCCCceEEEEEcCCCCCeeEeCCCC
Q 010677 80 YYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 111 (504)
Q Consensus 80 Y~~~i~iGtP~Q~~~v~vDTGSs~~WV~~~~C 111 (504)
=.+.+.||. |.++.++|||.+++.+...+.
T Consensus 113 P~~~iki~G--q~~e~LlDTGAD~TVl~~~~l 142 (203)
T 3ka2_A 113 PLVTIRIGG--QLKEALLDTGADDTVIEELNL 142 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSCCC
T ss_pred CcEEEEECC--EEEeeeecccCCceeeecccC
Confidence 467799998 999999999999999965443
No 85
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=20.99 E-value=54 Score=26.68 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=24.6
Q ss_pred ceEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCH
Q 010677 258 YWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 295 (504)
Q Consensus 258 ~w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~ 295 (504)
.|+=.+- +.|+|+.+. +++|||+-.+.++.
T Consensus 11 l~~rP~v-ikI~Gq~~e-------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------EEecCCCCcEEEcc
Confidence 4666666 999998764 89999999998875
No 86
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=20.46 E-value=94 Score=29.67 Aligned_cols=40 Identities=15% Similarity=0.035 Sum_probs=25.9
Q ss_pred ceeEEecCCccceEEEEeeEEEc--CeEeeeecCCceEEEccCccCcccCHH
Q 010677 247 SHIYVPITEKGYWQIKVGDILIE--NSSTGFCEDGCTAILDSGTSVLAGPTT 296 (504)
Q Consensus 247 ~l~~~pv~~~~~w~v~l~~i~v~--~~~~~~~~~~~~aivDSGTs~i~lP~~ 296 (504)
.+.-.+......|.+. |.|| .+. ..+++|||++.+++|..
T Consensus 5 ~v~~~~~~~~~~Y~~~---i~iGTP~q~-------~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGNDIEYYGQ---VTIGTPGKK-------FNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTTTEEEEE---EEETTTTEE-------EEEEEETTCCCCEEEBT
T ss_pred ceeeeecCCCCEEEEE---EEECCCCeE-------EEEEEcCCCCCEEEccC
Confidence 3333444445556554 5677 343 35999999999999864
No 87
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=20.05 E-value=53 Score=25.90 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=23.1
Q ss_pred eEEEEeeEEEcCeEeeeecCCceEEEccCccCcccCH
Q 010677 259 WQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 295 (504)
Q Consensus 259 w~v~l~~i~v~~~~~~~~~~~~~aivDSGTs~i~lP~ 295 (504)
|+=.+-.+.++|+.+. +++|||+-.+.+..
T Consensus 6 ~~rP~vtvkI~Gq~~e-------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------EEeccCCCcEEEec
Confidence 4444556888888764 99999999998874
Done!