BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010681
(504 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 110/434 (25%), Positives = 197/434 (45%), Gaps = 45/434 (10%)
Query: 57 LHHYMTDLAAKHGTYRLLGPF-RSEVYSSDPANVEYMLKTNFDNYGKGSYNYSILKDLLG 115
L D A K+G + F ++ V + P +V+ L + Y K S Y L+ + G
Sbjct: 12 LQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFG 69
Query: 116 DGIF------TVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDK 169
+ +F + E+W +QR++ FS L F + A +L ++L A+
Sbjct: 70 ERLFGQGLVSECNYERWHKQRRVIDLAFSRSSLVSLMET-FNEKAEQLVEILEAKADGQT 128
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNE---EGTRFSSAFDDASAMTLWRYVDIF 226
+ +QD+ + +D + K AFG+E + G+ + + + AS TL +++
Sbjct: 129 PVSMQDMLTYTAMDILAKAAFGMETSMLLGAQKPLSQAVKLMLEGITASRNTLAKFLP-- 186
Query: 227 WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV- 285
K K+L + ++ I + ++++ + + +E DIL++ L+
Sbjct: 187 GKRKQLREV------RESIRFLRQVGRDWVQRRREALKRGEE-----VPADILTQILKAE 235
Query: 286 ---TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISD 342
D + L D + F IAG +T+A L++ + L + P + ++ EV E G+K D
Sbjct: 236 EGAQDDEGLLDNFVTFFIAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLD 295
Query: 343 FLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCY 402
F E L ++ YL + E+LRLYP ++ ++TL DG V + +
Sbjct: 296 F---------EDLGRLQYLSQVLKESLRLYPPAWGTFRL-LEEETLIDGVRVPGNTPLLF 345
Query: 403 QAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMK 462
Y MGRM + +D F P+R+ G + F + F G R C+G++FA ++K
Sbjct: 346 STYVMGRMD-TYFEDPLTFNPDRF----GPGAPKPRFTYFPFSLGHRSCIGQQFAQMEVK 400
Query: 463 IYSAVLLSCFKFRL 476
+ A LL +FRL
Sbjct: 401 VVMAKLLQRLEFRL 414
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 122 bits (307), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 103/385 (26%), Positives = 175/385 (45%), Gaps = 61/385 (15%)
Query: 111 KDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSD 168
+D GDG+FT + W++ I FS + ++ + A A +L Q E N+D
Sbjct: 79 RDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNAD 136
Query: 169 KILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVDI 225
+ +++ + + TLD+I +CG N RF+S + D +++ R +D
Sbjct: 137 EYIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFIISMIRALDE 183
Query: 226 FWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKED 277
+ N A + ++ I+V++ V KII RK + + D D
Sbjct: 184 VMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD-----------D 232
Query: 278 ILSRFLQVTDPKYLRDI--------ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQ 329
+L++ L DP+ + I+ F+IAG +TT+ LS+ +Y L K+P V +K+ +
Sbjct: 233 LLTQMLNGKDPETGEPLDDGNISYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKVAE 292
Query: 330 EVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP 389
E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EATRVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVLG 342
Query: 390 DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPR 449
+ + KGD V + R K IWGDD EEF+PER+ + + I Q F F G R
Sbjct: 343 GEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQR 398
Query: 450 ICLGKEFAYRQMKIYSAVLLSCFKF 474
C+G++FA + + ++L F F
Sbjct: 399 ACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 120 bits (302), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 175/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P VP + D L
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTVPAFSLYAKEDTVL 344
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 400
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 104/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+GK+FA + + ++L F F
Sbjct: 398 RACIGKQFALHEATLVLGMMLKHFDF 423
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 84 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 141
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 142 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 188
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 189 EAMNKLQRTNPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 237
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 238 DLLTHMLHGKDPETGEPLDDENIRYQIVTFLIAGHETTSGLLSFTLYFLVKNPHVLQKAA 297
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 298 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 347
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 348 GGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 403
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 404 RACIGQQFALHEATLVLGMMLKHFDF 429
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 119 bits (299), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFFGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 398
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 344
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 400
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 119 bits (298), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 119 bits (297), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPPFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 398
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 118 bits (296), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 81 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 138
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 139 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 185
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 186 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 234
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 235 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 294
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 295 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTSPAFSLYAKEDTVL 344
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 345 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 400
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 401 RACIGQQFALHEATLVLGMMLKHFDF 426
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 398
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C G++FA + + ++L F F
Sbjct: 399 RACPGQQFALHEATLVLGMMLKHFDF 424
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 117 bits (294), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F + G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPYGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHENTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C G++FA + + ++L F F
Sbjct: 398 RACEGQQFALHEATLVLGMMLKHFDF 423
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 117 bits (293), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIQGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLICGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIEGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIKGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 117 bits (293), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIHGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 103/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGEFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 117 bits (292), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+I G +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIMGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 174/386 (45%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F + G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPWGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 116 bits (290), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPHGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPAGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 196/447 (43%), Gaps = 65/447 (14%)
Query: 51 LLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVY-SSDPANVEYMLKTNFDNYGKGSYNYS 108
LLN ++ + +A + G ++ P R Y SS E ++ FD S
Sbjct: 20 LLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDK--NLSQALK 77
Query: 109 ILKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAAN 166
++D GDG+ T + W++ I FS + ++ + A A +L Q E N
Sbjct: 78 FVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLN 135
Query: 167 SDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYV 223
+D+ +++ + + TLD+I +CG N RF+S + D ++ R +
Sbjct: 136 ADEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRAL 182
Query: 224 DIFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKK 275
D + N A + ++ I+V++ V KII RK + + D
Sbjct: 183 DEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------- 232
Query: 276 EDILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKI 327
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 233 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA 291
Query: 328 VQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDT 387
+E V S + ++++ Y+ + E LRL+P P + D
Sbjct: 292 AEEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 341
Query: 388 LPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAG 447
L + + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNG 397
Query: 448 PRICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 QRACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 196/447 (43%), Gaps = 65/447 (14%)
Query: 51 LLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVY-SSDPANVEYMLKTNFDNYGKGSYNYS 108
LLN ++ + +A + G ++ P R Y SS E ++ FD S
Sbjct: 19 LLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDK--NLSQALK 76
Query: 109 ILKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAAN 166
++D GDG+ T + W++ I FS + ++ + A A +L Q E N
Sbjct: 77 FVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLN 134
Query: 167 SDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYV 223
+D+ +++ + + TLD+I +CG N RF+S + D ++ R +
Sbjct: 135 ADEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRAL 181
Query: 224 DIFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKK 275
D + N A + ++ I+V++ V KII RK + + D
Sbjct: 182 DEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------- 231
Query: 276 EDILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKI 327
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA 290
Query: 328 VQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDT 387
+E V S + ++++ Y+ + E LRL+P P + D
Sbjct: 291 AEEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 388 LPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAG 447
L + + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNG 396
Query: 448 PRICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 115 bits (289), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 115/447 (25%), Positives = 196/447 (43%), Gaps = 65/447 (14%)
Query: 51 LLNFNRLHHYMTDLAAKHG-TYRLLGPFRSEVY-SSDPANVEYMLKTNFDNYGKGSYNYS 108
LLN ++ + +A + G ++ P R Y SS E ++ FD S
Sbjct: 19 LLNTDKPVQALMKIADELGEIFKFEAPGRVTCYLSSQRLIKEACDESRFDK--NLSQALK 76
Query: 109 ILKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAAN 166
++D GDG+ T + W++ I FS + ++ + A A +L Q E N
Sbjct: 77 FVRDFAGDGLLTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLN 134
Query: 167 SDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYV 223
+D+ +++ + + TLD+I +CG N RF+S + D ++ R +
Sbjct: 135 ADEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRAL 181
Query: 224 DIFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKK 275
D + N A + ++ I+V++ V KII RK + + D
Sbjct: 182 DEAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD---------- 231
Query: 276 EDILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKI 327
D+L+ L DP+ +R I+ F+IAG ++T+ LS+ +Y L K+P V +K
Sbjct: 232 -DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHESTSGLLSFALYFLVKNPHVLQKA 290
Query: 328 VQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDT 387
+E V S + ++++ Y+ + E LRL+P P + D
Sbjct: 291 AEEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTV 340
Query: 388 LPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAG 447
L + + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 341 LGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNG 396
Query: 448 PRICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 397 QRACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 115 bits (288), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 173/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ +IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITELIAGHETTSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 115 bits (287), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 172/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++DL GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDLAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K +WGDD EEF+PER+ + + I Q F F G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQ 398
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 398
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTGPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 172/378 (45%), Gaps = 41/378 (10%)
Query: 114 LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDI 173
+ I + E+W+ R + S F++ L++ + L + L A + K + +
Sbjct: 93 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTL 151
Query: 174 QDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLL 233
+D+F ++D I +FGV +DS+ + ++ + + ++D F+ L
Sbjct: 152 KDVFGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----L 200
Query: 234 NIGSEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL----- 283
+I L +EV++ V+ +RK +M + + E T + D L +
Sbjct: 201 SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 260
Query: 284 -QVTDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
+ K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+
Sbjct: 261 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 320
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K + + + +M YL + ETLRL+P ++C D + +G + KG
Sbjct: 321 KAPPTY---------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKG 370
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFA 457
+V +YA+ R W + E+F PER+ +N P+ +T F +GPR C+G FA
Sbjct: 371 VVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPFGSGPRNCIGMRFA 427
Query: 458 YRQMKIYSAVLLSCFKFR 475
MK+ +L F F+
Sbjct: 428 LMNMKLALIRVLQNFSFK 445
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 172/378 (45%), Gaps = 41/378 (10%)
Query: 114 LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDI 173
+ I + E+W+ R + S F++ L++ + L + L A + K + +
Sbjct: 94 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTL 152
Query: 174 QDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLL 233
+D+F ++D I +FGV +DS+ + ++ + + ++D F+ L
Sbjct: 153 KDVFGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----L 201
Query: 234 NIGSEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL----- 283
+I L +EV++ V+ +RK +M + + E T + D L +
Sbjct: 202 SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 261
Query: 284 -QVTDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
+ K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+
Sbjct: 262 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 321
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K + + + +M YL + ETLRL+P ++C D + +G + KG
Sbjct: 322 KAPPTY---------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKG 371
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFA 457
+V +YA+ R W + E+F PER+ +N P+ +T F +GPR C+G FA
Sbjct: 372 VVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPFGSGPRNCIGMRFA 428
Query: 458 YRQMKIYSAVLLSCFKFR 475
MK+ +L F F+
Sbjct: 429 LMNMKLALIRVLQNFSFK 446
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 114 bits (284), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 172/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLATSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG + T+ LS+ +Y L K+P V +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHEATSGLLSFALYFLVKNPHVLQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 172/378 (45%), Gaps = 41/378 (10%)
Query: 114 LGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDI 173
+ I + E+W+ R + S F++ L++ + L + L A + K + +
Sbjct: 92 MKSAISIAEDEEWKRLRSLLSPTFTSGKLKEMV-PIIAQYGDVLVRNLRREAETGKPVTL 150
Query: 174 QDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLL 233
+D+F ++D I +FGV +DS+ + ++ + + ++D F+ L
Sbjct: 151 KDVFGAYSMDVITSTSFGVNIDSLNNPQD------PFVENTKKLLRFDFLDPFF-----L 199
Query: 234 NIGSEARLKQRIEVIDTFVYK-----IIRKKTDQMHDFQEEYTSMKKEDILSRFL----- 283
+I L +EV++ V+ +RK +M + + E T + D L +
Sbjct: 200 SITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLEDTQKHRVDFLQLMIDSQNS 259
Query: 284 -QVTDPKYLRDIILN-----FVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
+ K L D+ L F+ AG +TT++ LS+ +Y L HP VQ+K+ +E+
Sbjct: 260 KETESHKALSDLELVAQSIIFIFAGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPN 319
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K + + + +M YL + ETLRL+P ++C D + +G + KG
Sbjct: 320 KAPPTY---------DTVLQMEYLDMVVNETLRLFPIAMRLERVCKKDVEI-NGMFIPKG 369
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFA 457
+V +YA+ R W + E+F PER+ +N P+ +T F +GPR C+G FA
Sbjct: 370 VVVMIPSYALHRDPKYW-TEPEKFLPERFSKKNK--DNIDPYIYTPFGSGPRNCIGMRFA 426
Query: 458 YRQMKIYSAVLLSCFKFR 475
MK+ +L F F+
Sbjct: 427 LMNMKLALIRVLQNFSFK 444
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/386 (26%), Positives = 172/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W + I FS + ++ + A A +L Q E N+
Sbjct: 79 VRDFAGDGLFTSWTHEKNWCKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I + G N RF+S + D ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLSGFN---YRFNSFYRDQPHPFITSMVRALD 183
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 184 EAMNKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 232
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+IAG +TT+ LS+ +Y L K+P V +K
Sbjct: 233 DLLTHMLNGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLSFALYFLVKNPHVLQKAA 292
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 293 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 342
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 343 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 398
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 399 RACIGQQFALHEATLVLGMMLKHFDF 424
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 100/386 (25%), Positives = 171/386 (44%), Gaps = 61/386 (15%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+FT + W++ I FS + ++ + A A +L Q E N+
Sbjct: 78 VRDFAGDGLFTSWTHEKNWKKAHNILLPSFSQQAMKGYH-AMMVDIAVQLVQKW-ERLNA 135
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDAS---AMTLWRYVD 224
D+ +++ + + TLD+I +CG N RF+S + D ++ R +D
Sbjct: 136 DEHIEVPEDMTRLTLDTI----------GLCGFN---YRFNSFYRDQPHPFITSMVRALD 182
Query: 225 IFWKIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKE 276
+ N A + ++ I+V++ V KII RK + + D
Sbjct: 183 EAMNKLRRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD----------- 231
Query: 277 DILSRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
D+L+ L DP+ +R I+ F+ AG + T+ LS+ +Y L K+P +K
Sbjct: 232 DLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHELQKAA 291
Query: 329 QEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL 388
+E V S + ++++ Y+ + E LRL+P P + D L
Sbjct: 292 EEAARVL----------VDPVPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYAKEDTVL 341
Query: 389 PDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGP 448
+ + KGD + + R K IWGDD EEF+PER+ + + I Q F F G
Sbjct: 342 GGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPSAIPQH----AFKPFGNGQ 397
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKF 474
R C+G++FA + + ++L F F
Sbjct: 398 RACIGQQFALHEATLVLGMMLKHFDF 423
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 112 bits (281), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 97/383 (25%), Positives = 168/383 (43%), Gaps = 55/383 (14%)
Query: 110 LKDLLGDGIFT--VDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANS 167
++D GDG+ T + W++ R I S + ++ + A A +L Q E NS
Sbjct: 79 VRDFAGDGLATSWTHEKNWKKARNILLPRLSQQAMKGYH-AMMVDIAVQLVQKW-ERLNS 136
Query: 168 DKILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFW 227
D+ +++ + + TLD+I +CG N F ++ R +D
Sbjct: 137 DEHIEVPEDMTRLTLDTI----------GLCGFNYRINSFYRDQPHPFITSMVRALDEVM 186
Query: 228 KIKKLLNIGSEA------RLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDIL 279
+ N A + ++ I+V++ V KII RK + + D D+L
Sbjct: 187 NKLQRANPDDPAYDENKRQFQEDIKVMNDLVDKIIADRKASGEQSD-----------DLL 235
Query: 280 SRFLQVTDPKY--------LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
+ L DP+ +R I+ F+IAG +TT+ L++ +Y L K+P V +K +E
Sbjct: 236 THMLHGKDPETGEPLDDENIRYQIITFLIAGHETTSGLLTFALYFLVKNPHVLQKAAEEA 295
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
V S + ++++ Y+ + E LR++P P + D L
Sbjct: 296 ARVL----------VDPVPSYKQVKQLKYVGMVLNEALRIWPTAPAFSLYAKEDTMLGGE 345
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC 451
+ + KGD + + R K +WGDD EEF+PER+ + + I Q F F G R C
Sbjct: 346 YPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPSAIPQ----HAFKPFGNGQRAC 401
Query: 452 LGKEFAYRQMKIYSAVLLSCFKF 474
+G++FA + + ++L F F
Sbjct: 402 IGQQFALHEATLVLGMMLKHFDF 424
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 93.6 bits (231), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 151/363 (41%), Gaps = 39/363 (10%)
Query: 118 IFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLF 177
IF + E W+ R S L + L +L E N +D+ L
Sbjct: 133 IFNNNPELWKTTRPFFMKALSGPGLVRMVTVCAESLKTHLDRL-EEVTNESGYVDVLTLL 191
Query: 178 MKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKLLNI-- 235
+ LD+ + + LD + + FD A+ + DIF+KI L
Sbjct: 192 RRVMLDTSNTLFLRIPLDE----SAIVVKIQGYFDAWQALLI--KPDIFFKISWLYKKYE 245
Query: 236 GSEARLKQRIEVIDTFVYKII--RKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRD 293
S LK IEV+ + I +K ++ DF E +K L+R + +
Sbjct: 246 KSVKDLKDAIEVLIAEKRRRISTEEKLEECMDFATELILAEKRGDLTR-------ENVNQ 298
Query: 294 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 353
IL +IA DT + +L + ++++ KHP V+E I++E++ G +DI +
Sbjct: 299 CILEMLIAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERDIKI----------D 348
Query: 354 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 413
++K+ + I E++R P V + + DD + DG+ V+KG + M R++F
Sbjct: 349 DIQKLKVMENFIYESMRYQPVVDLVMRKALEDDVI-DGYPVKKGTNIILNIGRMHRLEFF 407
Query: 414 WGDDAEEFKPERWLDENGIFQKESPFK-FTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 472
KP + EN F K P++ F F GPR C GK A MK LL F
Sbjct: 408 P-------KPNEFTLEN--FAKNVPYRYFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRF 458
Query: 473 KFR 475
+
Sbjct: 459 HVK 461
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 127/272 (46%), Gaps = 29/272 (10%)
Query: 227 WKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVT 286
W + L + S R + I YK I+K+ QE K +DIL L T
Sbjct: 191 WLLPGWLPLPSFRRRDRAHREIKDIFYKAIQKRRQS----QE-----KIDDILQTLLDAT 241
Query: 287 --DPKYLRD-----IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKD 339
D + L D +++ ++AG+ T++ T +W + L + +Q+K E K G
Sbjct: 242 YKDGRPLTDDEVAGMLIGLLLAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGEN- 300
Query: 340 ISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDM 399
++ + L+ ++ L I ETLRL P + + +M + T+ G+++ G
Sbjct: 301 -------LPPLTYDQLKDLNLLDRCIKETLRLRPPIMIMMRMARTPQTV-AGYTIPPGHQ 352
Query: 400 VCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYR 459
VC R+K W + + F P+R+L +N ++ F + F AG C+G+ FAY
Sbjct: 353 VCVSPTVNQRLKDSWVERLD-FNPDRYLQDNPASGEK--FAYVPFGAGRHRCIGENFAYV 409
Query: 460 QMKIYSAVLLSCFKFRLRN-VSETVNYRTMIN 490
Q+K + +L ++F L + TVNY TMI+
Sbjct: 410 QIKTIWSTMLRLYEFDLIDGYFPTVNYTTMIH 441
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 107/458 (23%), Positives = 184/458 (40%), Gaps = 56/458 (12%)
Query: 33 SGNKQKKYHPIGGTVFNQLLNFNRLHH----YMTDLAAKHGTYRL-LGPFRSEVYSSDPA 87
G + + P+ G L + RL +M+ L R+ LGP VY+
Sbjct: 16 PGAPELREPPVAGGGVPLLGHGWRLARDPLAFMSQLRDHGDVVRIKLGP--KTVYAVTNP 73
Query: 88 NVEYMLKTNFDNYGKGSYNYSILKDLLG-DGIFTVDGEKWREQRKISSHEFSTKVLRDFS 146
+ L N D + G + L+ LLG +G+ T +G R QR+ F +
Sbjct: 74 ELTGALALNPDYHIAGPL-WESLEGLLGKEGVATANGPLHRRQRRTIQPAFRLDAI---- 128
Query: 147 SAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAFGVELDSVCGS---NEE 203
A+ + A L+E K +D +T +S F+VA V + +E
Sbjct: 129 -PAYGPIMEEEAHALTERWQPGKTVD-------ATSES-FRVAVRVAARCLLRGQYMDER 179
Query: 204 GTRFSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM 263
R A R V + +L + + R + + V +II ++
Sbjct: 180 AERLCVALATVFRGMYRRMVVPLGPLYRL-PLPANRRFNDALADLHLLVDEIIAER---- 234
Query: 264 HDFQEEYTSMKKEDILSRFLQVTD-------PKYLRDIILNFVIAGKDTTAATLSWFIYM 316
+ K +D+L+ L+ D + + D ++ + G +T A+T+ W +
Sbjct: 235 -----RASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQVVAILTPGSETIASTIMWLLQA 289
Query: 317 LCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVP 376
L HP ++I EV+ TG + ++ F E + K+ + I E +RL PAV
Sbjct: 290 LADHPEHADRIRDEVEAVTGGRPVA-F---------EDVRKLRHTGNVIVEAMRLRPAVW 339
Query: 377 VDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKE 436
V + ++ L G+ + G + Y YA+ R + DD EF P+RWL E +
Sbjct: 340 VLTRRAVAESEL-GGYRIPAGADIIYSPYAIQRDPKSY-DDNLEFDPDRWLPERAANVPK 397
Query: 437 SPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKF 474
+ F AG R C F+ Q+ + +A L + ++F
Sbjct: 398 --YAMKPFSAGKRKCPSDHFSMAQLTLITAALATKYRF 433
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/186 (32%), Positives = 91/186 (48%), Gaps = 13/186 (6%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 350
L+D IL + AG +T + LS F +L +H ++E++ QE + L+++ +
Sbjct: 244 LKDQILLLLFAGHETLTSALSSFCLLLGQHSDIRERVRQEQNK----------LQLSQEL 293
Query: 351 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
+ E L+KM YL + E LRL P V + D GF KG +V YQ
Sbjct: 294 TAETLKKMPYLDQVLQEVLRLIPPVGGGFRELIQDCQF-QGFHFPKGWLVSYQISQTHAD 352
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 470
++ D E+F PER+ +G PF F G R CLGKEFA +MK+++ L+
Sbjct: 353 PDLY-PDPEKFDPERF-TPDGSATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQ 410
Query: 471 CFKFRL 476
F + L
Sbjct: 411 QFDWTL 416
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 26/274 (9%)
Query: 207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTD 261
FS + A++ +++ Y W +L G +L + V+ F+ ++I K K
Sbjct: 188 FSENVELAASASVFLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 262 QMHDFQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLC 318
F + Y K D S F + + L + +IAG +TT L W I +
Sbjct: 246 LPQHFVDAYLDEMDQGKNDPSSTFSK----ENLIFSVGELIIAGTETTTNVLRWAILFMA 301
Query: 319 KHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD 378
+P +Q ++ +E+ G G S + KM Y A + E LR VP+
Sbjct: 302 LYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 379 AKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESP 438
S+D + G+S+ KG V Y++ + W D E F PER+LD +G F K+
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGYFAKKE- 410
Query: 439 FKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 472
F G R CLG+ A +M ++ LL F
Sbjct: 411 -ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 117/274 (42%), Gaps = 26/274 (9%)
Query: 207 FSSAFDDASAMTLWRYVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRK-----KTD 261
FS + A++ +++ Y W +L G +L + V+ F+ ++I K K
Sbjct: 188 FSENVELAASASVFLYNAFPWI--GILPFGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQ 245
Query: 262 QMHDFQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLC 318
F + Y K D S F + + L + +IAG +TT L W I +
Sbjct: 246 LPQHFVDAYLDEMDQGKNDPSSTFSK----ENLIFSVGELIIAGTETTTNVLRWAILFMA 301
Query: 319 KHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVD 378
+P +Q ++ +E+ G G S + KM Y A + E LR VP+
Sbjct: 302 LYPNIQGQVQKEIDLIMGPN---------GKPSWDDKCKMPYTEAVLHEVLRFCNIVPLG 352
Query: 379 AKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESP 438
S+D + G+S+ KG V Y++ + W D E F PER+LD +G F K+
Sbjct: 353 IFHATSEDAVVRGYSIPKGTTVITNLYSVHFDEKYW-RDPEVFHPERFLDSSGYFAKKE- 410
Query: 439 FKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 472
F G R CLG+ A +M ++ LL F
Sbjct: 411 -ALVPFSLGRRHCLGEHLARMEMFLFFTALLQRF 443
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 79.3 bits (194), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 85/175 (48%), Gaps = 14/175 (8%)
Query: 289 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAG 348
K L + +A +TTA +L W +Y L ++P Q +++QEV+
Sbjct: 282 KELYAAVTELQLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTP------- 334
Query: 349 CISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 408
E L M YL A + E++RL P+VP + T+ +++ KG ++ +G
Sbjct: 335 --RAEDLRNMPYLKACLKESMRLTPSVPFTTR-TLDKPTVLGEYALPKGTVLTLNTQVLG 391
Query: 409 RMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKI 463
+ + +D+ +F+PERWL + +K +PF F G R+C+G+ A Q+ +
Sbjct: 392 SSEDNF-EDSHKFRPERWLQKE---KKINPFAHLPFGIGKRMCIGRRLAELQLHL 442
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 350
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G + +
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE-------M 325
Query: 351 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
++A M Y A I E R VP+ S D GF + KG + ++ +
Sbjct: 326 GDQA--HMPYTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 470
+ +W + F PE +LD G F K P F F AG R CLG+ A ++ ++ LL
Sbjct: 384 EAVW-EKPFRFHPEHFLDAQGHFVK--PEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 471 CFKF 474
F F
Sbjct: 441 HFSF 444
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 38/372 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQ 460
+ + + + F P +LD NG ++ F F G RICLG+ A +
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTE 426
Query: 461 MKIYSAVLLSCF 472
+ ++ +L F
Sbjct: 427 LFLFFTTILQNF 438
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 38/372 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQ 460
+ + + + F P +LD NG ++ F F G RICLG+ A +
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTE 426
Query: 461 MKIYSAVLLSCF 472
+ ++ +L F
Sbjct: 427 LFLFFTTILQNF 438
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 85/184 (46%), Gaps = 12/184 (6%)
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCI 350
LR ++ + AG TT+ TL+W + ++ HP VQ ++ QE+ + G + +
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPE-------M 325
Query: 351 SEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
++A M Y A I E R VP+ S D GF + KG + ++ +
Sbjct: 326 GDQA--HMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKD 383
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 470
+ +W + F PE +LD G F K P F F AG R CLG+ A ++ ++ LL
Sbjct: 384 EAVW-EKPFRFHPEHFLDAQGHFVK--PEAFLPFSAGRRACLGEPLARMELFLFFTSLLQ 440
Query: 471 CFKF 474
F F
Sbjct: 441 HFSF 444
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 110/246 (44%), Gaps = 30/246 (12%)
Query: 240 RLKQRIEVIDTFVYKIIRKKTDQMHDFQ---------EEYTSMKKEDILSRFLQVTDPKY 290
RLKQ IE D V K +R+ + M Q + + E+ + L+ +
Sbjct: 224 RLKQAIENRDHMVEKQLRRHKESMVAGQWRDMTDYMLQGVGRQRVEEGPGQLLE----GH 279
Query: 291 LRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC- 349
+ +++ I G +TTA+TLSW + L HP +Q ++ +E+ G A C
Sbjct: 280 VHMSVVDLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPG--------ASCS 331
Query: 350 -ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 408
++ + ++ L+A I E LRL P VP+ + + G+ + +G +V
Sbjct: 332 RVTYKDRARLPLLNATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAH 391
Query: 409 RMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVL 468
+ +W + EF+P+R+L+ +P AF G R+CLG+ A ++ + A L
Sbjct: 392 LDETVW-EQPHEFRPDRFLEPGA-----NPSAL-AFGCGARVCLGESLARLELFVVLARL 444
Query: 469 LSCFKF 474
L F
Sbjct: 445 LQAFTL 450
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 38/372 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQ 460
+ + + + F P +LD NG ++ F F G RICLG+ A +
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTE 426
Query: 461 MKIYSAVLLSCF 472
+ ++ +L F
Sbjct: 427 LFLFFTTILQNF 438
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 151/372 (40%), Gaps = 38/372 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQ 460
+ + + + F P +LD NG ++ F F G RICLG+ A +
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICLGEGIARTE 426
Query: 461 MKIYSAVLLSCF 472
+ ++ +L F
Sbjct: 427 LFLFFTTILQNF 438
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/429 (23%), Positives = 176/429 (41%), Gaps = 61/429 (14%)
Query: 81 VYSSDPANVEYMLKTNFDNYGK------GSYNYSILKDLLGDGIFTVDGEKWREQRKISS 134
VY DP +V + K+ N + +Y+ + + G+ W++ R +
Sbjct: 56 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPI---GVLLKKSAAWKKDRVALN 112
Query: 135 HEF----STKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF 190
E +TK A R + L + + +A + + DI D + +SI V F
Sbjct: 113 QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIF 172
Query: 191 GVE---LDSVCGSNEEGTRFSSAFDD---ASAMTLWRYVDIF-------WKIKKLLNIGS 237
G L+ V N E RF A S L D+F WK ++ +
Sbjct: 173 GERQGMLEEVV--NPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAA 226
Query: 238 EARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDII 295
+ + ++ Y +R+K HD++ IL R L + + ++ +
Sbjct: 227 WDVIFSKADIYTQNFYWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANV 277
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEE 353
+ G DTT+ TL W +Y + ++ VQ+ + EV A D++ L++
Sbjct: 278 TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL---- 333
Query: 354 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 413
L A+I ETLRL+P + V + +D + + + +V YA+GR
Sbjct: 334 -------LKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 385
Query: 414 WGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK 473
+ D E F P RWL ++ + + F+ F G R CLG+ A +M I+ +L F+
Sbjct: 386 FF-DPENFDPTRWLSKD---KNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENFR 441
Query: 474 FRLRNVSET 482
++++S+
Sbjct: 442 VEIQHLSDV 450
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 176/431 (40%), Gaps = 65/431 (15%)
Query: 81 VYSSDPANVEYMLKTNFDNYGK------GSYNYSILKDLLGDGIFTVDGEKWREQRKISS 134
VY DP +V + K+ N + +Y+ + + G+ W++ R +
Sbjct: 59 VYVIDPEDVALLFKSEGPNPERFLIPPWVAYHQYYQRPI---GVLLKKSAAWKKDRVALN 115
Query: 135 HEF----STKVLRDFSSAAFRKNAAKLAQLLSEAANSDKILDIQDLFMKSTLDSIFKVAF 190
E +TK A R + L + + +A + + DI D + +SI V F
Sbjct: 116 QEVMAPEATKNFLPLLDAVSRDFVSVLHRRIKKAGSGNYSGDISDDLFRFAFESITNVIF 175
Query: 191 GVE---LDSVCGSNEEGTRFSSAFDD---ASAMTLWRYVDIF-------WKIKKLLNIGS 237
G L+ V N E RF A S L D+F WK ++ +
Sbjct: 176 GERQGMLEEVV--NPEAQRFIDAIYQMFHTSVPMLNLPPDLFRLFRTKTWKD----HVAA 229
Query: 238 EARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKY--LRDII 295
+ + ++ Y +R+K HD++ IL R L + + ++ +
Sbjct: 230 WDVIFSKADIYTQNFYWELRQKGSVHHDYR---------GILYRLLGDSKMSFEDIKANV 280
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA--TGAKDISDFLKVAGCISEE 353
+ G DTT+ TL W +Y + ++ VQ+ + EV A D++ L++
Sbjct: 281 TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEVLAARHQAQGDMATMLQLVPL---- 336
Query: 354 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 413
L A+I ETLRL+P + V + +D + + + +V YA+GR
Sbjct: 337 -------LKASIKETLRLHP-ISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTF 388
Query: 414 WGDDAEEFKPERWL--DENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSC 471
+ D E F P RWL D+N + F+ F G R CLG+ A +M I+ +L
Sbjct: 389 FF-DPENFDPTRWLSKDKNITY-----FRNLGFGWGVRQCLGRRIAELEMTIFLINMLEN 442
Query: 472 FKFRLRNVSET 482
F+ ++++S+
Sbjct: 443 FRVEIQHLSDV 453
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 180/444 (40%), Gaps = 49/444 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ LN I G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC 451
F + KG V ++ R + + ++F P+ +L+E G F+K F F G R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNC 417
Query: 452 LGKEFAYRQMKIYSAVLLSCFKFR 475
G+ A ++ ++ ++ F+ +
Sbjct: 418 FGEGLARMELFLFFTTVMQNFRLK 441
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 75.5 bits (184), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/372 (23%), Positives = 150/372 (40%), Gaps = 38/372 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +GE+WR R+ FS +RDF + + + A+ L E K +
Sbjct: 91 GYGVIFANGERWRALRR-----FSLATMRDFGMGKRSVEERIQEEARCLVEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
LD LF T + I + FG D + R F + ++ +F
Sbjct: 146 LDNTLLFHSITSNIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFS 202
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEY---TSMKKEDILS 280
L G+ ++ + ++ I+TF+ + + K + DF + Y K D S
Sbjct: 203 GFLKYFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPRDFIDVYLLRMEKDKSDPSS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L +L+ AG +TT+ TL + ++ K+P V E++ +E+++ G+
Sbjct: 263 EFHH----QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHR- 317
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ + A KM Y A I E RL +P + DT G+ + K V
Sbjct: 318 ------PPALDDRA--KMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEV 369
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQ 460
+ + + + F P +LD NG ++ F F G RIC G+ A +
Sbjct: 370 -FPVLSSALHDPRYFETPNTFNPGHFLDANGALKRNE--GFMPFSLGKRICAGEGIARTE 426
Query: 461 MKIYSAVLLSCF 472
+ ++ +L F
Sbjct: 427 LFLFFTTILQNF 438
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/346 (25%), Positives = 148/346 (42%), Gaps = 28/346 (8%)
Query: 117 GIFTVDGEKWREQR-KISSHEFSTKVLRDFSS---AAFRKNAAKLAQLLSEAANSDKILD 172
G+F ++G +WR R +++ S K ++ F A R + L + + + A LD
Sbjct: 102 GVFLLNGPEWRFNRLRLNPDVLSPKAVQRFLPMVDAVARDFSQALKKKVLQNARGSLTLD 161
Query: 173 IQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIKKL 232
+Q T+++ FG L V S S F A + V + + + L
Sbjct: 162 VQPSIFHYTIEASNLALFGERLGLVGHSPSSA---SLNFLHALEVMFKSTVQLMFMPRSL 218
Query: 233 LNIGSEARLKQRIEVIDT-FVY--KIIRKKTDQMH-DFQEEYTSMKKEDILSRFLQVTDP 288
S K+ E D F Y I+K ++ + + YT + E +L L +
Sbjct: 219 SRWISPKVWKEHFEAWDCIFQYGDNCIQKIYQELAFNRPQHYTGIVAELLLKAELSL--- 275
Query: 289 KYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAG 348
+ ++ + DTTA L ++ L ++P VQ+ + QE A A IS+
Sbjct: 276 EAIKANSMELTAGSVDTTAFPLLMTLFELARNPDVQQILRQESLAA--AASISEH----- 328
Query: 349 CISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMG 408
++A ++ L AA+ ETLRLYP V + + S D + + + G +V Y++G
Sbjct: 329 --PQKATTELPLLRAALKETLRLYP-VGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLG 385
Query: 409 RMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGK 454
R ++ E + P+RWLD G + F F G R CLG+
Sbjct: 386 RNAALF-PRPERYNPQRWLDIRGSGRN---FHHVPFGFGMRQCLGR 427
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 95/444 (21%), Positives = 180/444 (40%), Gaps = 49/444 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ LN AG +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC 451
F + KG V ++ R + + ++F P+ +L+E G F+K F F G R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNC 417
Query: 452 LGKEFAYRQMKIYSAVLLSCFKFR 475
G+ A ++ ++ ++ F+ +
Sbjct: 418 FGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 179/444 (40%), Gaps = 49/444 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ L I G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC 451
F + KG V ++ R + + ++F P+ +L+E G F+K F F G R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNC 417
Query: 452 LGKEFAYRQMKIYSAVLLSCFKFR 475
G+ A ++ ++ ++ F+ +
Sbjct: 418 FGEGLARMELFLFFTTVMQNFRLK 441
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 63/230 (27%), Positives = 102/230 (44%), Gaps = 22/230 (9%)
Query: 250 TFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAAT 309
TF IR TD + + +E + ++ Q++D K + +I+L+ AG DT
Sbjct: 245 TFEKGHIRDITDSLIEHCQEKQLDENANV-----QLSDEKII-NIVLDLFGAGFDTVTTA 298
Query: 310 LSWFIYMLCKHPAVQEKIVQEVKEATGA---KDISDFLKVAGCISEEALEKMHYLHAAIT 366
+SW + L +P VQ KI +E+ G +SD + Y+ A I
Sbjct: 299 ISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSD------------RSHLPYMEAFIL 346
Query: 367 ETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERW 426
ET R VP + DT GF + KG V + + + +W + +E F PER+
Sbjct: 347 ETFRHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSE-FLPERF 405
Query: 427 LDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRL 476
L +G K K F G R C+G+ A ++ ++ A+LL +F +
Sbjct: 406 LTPDGAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSV 455
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/372 (21%), Positives = 151/372 (40%), Gaps = 38/372 (10%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDK--I 170
G G+ +G +W+ R+ FS +RDF + + + AQ L E K +
Sbjct: 91 GYGVIFANGNRWKVLRR-----FSVTTMRDFGMGKRSVEERIQEEAQCLIEELRKSKGAL 145
Query: 171 LDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
+D LF T + I + FG ++E + + F ++ + +F
Sbjct: 146 MDPTFLFQSITANIICSIVFGKRFHY---QDQEFLKMLNLFYQTFSLISSVFGQLFELFS 202
Query: 231 KLLN--IGSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEYT-SMKKE--DILS 280
L G+ ++ + ++ I+ ++ + K + + D + Y M+KE + S
Sbjct: 203 GFLKHFPGAHRQVYKNLQEINAYIGHSVEKHRETLDPSAPRDLIDTYLLHMEKEKSNAHS 262
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
F + L L+ AG +TT+ TL + ++ K+P V E++ +E+++ G
Sbjct: 263 EFSH----QNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRP 318
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+ A KM Y A I E R +P+ + T G+ + K D
Sbjct: 319 PELHDRA---------KMPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPK-DTE 368
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQ 460
+ + + + + F P+ +LD NG +K F F G RICLG+ A +
Sbjct: 369 VFLILSTALHDPHYFEKPDAFNPDHFLDANGALKKTE--AFIPFSLGKRICLGEGIARAE 426
Query: 461 MKIYSAVLLSCF 472
+ ++ +L F
Sbjct: 427 LFLFFTTILQNF 438
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/183 (26%), Positives = 87/183 (47%), Gaps = 16/183 (8%)
Query: 295 ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEA 354
+ + AG +TT+ TL + + +L K+P ++EK+ +E+ G I + +
Sbjct: 272 VADLFFAGTETTSTTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIP---------AIKD 322
Query: 355 LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC--YQAYAMGRMKF 412
++M Y+ A + E R VP + + DT+ G+ + KG +V + +F
Sbjct: 323 RQEMPYMDAVVHEIQRFITLVPSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEF 382
Query: 413 IWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCF 472
D E+FKPE +L+ENG F+ FK F G R+C G+ A ++ + +L F
Sbjct: 383 ---PDPEKFKPEHFLNENGKFKYSDYFK--PFSTGKRVCAGEGLARMELFLLLCAILQHF 437
Query: 473 KFR 475
+
Sbjct: 438 NLK 440
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 72.4 bits (176), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 94/444 (21%), Positives = 179/444 (40%), Gaps = 49/444 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQCLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ L I G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC 451
F + KG V ++ R + + ++F P+ +L+E G F+K F F G R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNC 417
Query: 452 LGKEFAYRQMKIYSAVLLSCFKFR 475
G+ A ++ ++ ++ F+ +
Sbjct: 418 FGEGLARMELFLFFTTVMQNFRLK 441
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/444 (20%), Positives = 179/444 (40%), Gaps = 49/444 (11%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKG---SYN 106
LN ++++ + ++ ++G LGP R V A E ++ + G+G +++
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86
Query: 107 YSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEA 164
+ + K G G+ +GE+ ++ R+ FS LRDF + + A L +A
Sbjct: 87 W-VFK---GYGVVFSNGERAKQLRR-----FSIATLRDFGVGKRGIEERIQEEAGFLIDA 137
Query: 165 ANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRY 222
+I F ++ + I + FG D R ++ + +
Sbjct: 138 LRGTGGANIDPTFFLSRTVSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQL 197
Query: 223 VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRF 282
++F + K L G + + Q ++ ++ F+ K + Q D + F
Sbjct: 198 YEMFSSVMKHLP-GPQQQAFQLLQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSF 249
Query: 283 L-----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEV 331
L + +P YL++++ L + G +T + TL + +L KHP V+ K+ +E+
Sbjct: 250 LIRMQEEEKNPNTEFYLKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEI 309
Query: 332 KEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDG 391
G F E KM Y+ A I E R +P+ DT
Sbjct: 310 DRVIGKNRQPKF---------EDRAKMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRD 360
Query: 392 FSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRIC 451
F + KG V ++ R + + ++F P+ +L+E G F+K F F G R C
Sbjct: 361 FFLPKGTEVYPMLGSVLRDPSFF-SNPQDFNPQHFLNEKGQFKKSD--AFVPFSIGKRNC 417
Query: 452 LGKEFAYRQMKIYSAVLLSCFKFR 475
G+ A ++ ++ ++ F+ +
Sbjct: 418 FGEGLARMELFLFFTTVMQNFRLK 441
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
AG +TT + + W + L +P V++K+ +E+ + G IS+ ++
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVG-------FSRTPTISDR--NRLLL 334
Query: 361 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 420
L A I E LRL P P+ + D+ F+V KG V +A+ + W ++
Sbjct: 335 LEATIREVLRLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEW-HQPDQ 393
Query: 421 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRL 476
F PER+L+ G + F AGPR C+G+ A +++ + A LL F +
Sbjct: 394 FMPERFLNPAGTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEV 449
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/392 (20%), Positives = 151/392 (38%), Gaps = 76/392 (19%)
Query: 124 EKWREQRKISSHEFSTKVLRDFSSAAFRK----------NAAKLAQLLSEAANSDKILDI 173
E W+ QR+ ++H ++R+F + R A +L LL + LD
Sbjct: 99 EHWKVQRR-AAHS----MMRNFFTRQPRSRQVLEGHVLSEARELVALLVRGSADGAFLDP 153
Query: 174 QDLFMKSTLDSIFKVAFGV-------ELDSVCGSNEEGTRFSSAFDDASAMTLWRY---- 222
+ L + + + + V FG E + NEE R A M +Y
Sbjct: 154 RPLTVVAVANVMSAVCFGCRYSHDDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNP 213
Query: 223 -------------------VDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM 263
+D F + + L G+ R +++D F+ +K
Sbjct: 214 VRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-----DMMDAFILSAEKKAAGDS 268
Query: 264 HDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAV 323
H + E++ P + DI A +DT + L W + + ++P V
Sbjct: 269 HG---GGARLDLENV---------PATITDIF----GASQDTLSTALQWLLLLFTRYPDV 312
Query: 324 QEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCF 383
Q ++ E+ + G + C+ ++ + Y+ A + E +R VPV
Sbjct: 313 QTRVQAELDQVVGRDRLP-------CMGDQ--PNLPYVLAFLYEAMRFSSFVPVTIPHAT 363
Query: 384 SDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTA 443
+ +T G+ + K +V +++ W + E F P R+LD++G+ K+ +
Sbjct: 364 TANTSVLGYHIPKDTVVFVNQWSVNHDPLKW-PNPENFDPARFLDKDGLINKDLTSRVMI 422
Query: 444 FQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 475
F G R C+G+E + Q+ ++ ++L FR
Sbjct: 423 FSVGKRRCIGEELSKMQLFLFISILAHQCDFR 454
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/443 (21%), Positives = 175/443 (39%), Gaps = 47/443 (10%)
Query: 52 LNFNRLHHYMTDLAAKHGTYRL--LGPFRSEVYSSDPANVEYMLKTNFDNYGKGSYNYSI 109
LN ++++ + ++ ++G LGP R V A E ++ + G+G
Sbjct: 27 LNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVDQAEEFSGRGE---QA 83
Query: 110 LKDLL--GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAA 165
D L G G+ +GE+ ++ R+ FS LR F + + A L +A
Sbjct: 84 TFDWLFKGYGVAFSNGERAKQLRR-----FSIATLRGFGVGKRGIEERIQEEAGFLIDAL 138
Query: 166 NSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYV 223
+I F ++ + I + FG D R +A + +
Sbjct: 139 RGTHGANIDPTFFLSRTVSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLY 198
Query: 224 DIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFL 283
++F + K L G + + + ++ ++ F+ K + Q D + FL
Sbjct: 199 EMFSSVMKHLP-GPQQQAFKELQGLEDFIAKKVEHN-------QRTLDPNSPRDFIDSFL 250
Query: 284 -----QVTDPK---YLRDII---LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVK 332
+ +P YL++++ LN AG +T + TL + +L KHP V+ K+ +E+
Sbjct: 251 IRMQEEEKNPNTEFYLKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEID 310
Query: 333 EATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGF 392
G F E KM Y A I E R +P+ + DT F
Sbjct: 311 RVIGKNRQPKF---------EDRAKMPYTEAVIHEIQRFGDMLPMGLAHRVNKDTKFRDF 361
Query: 393 SVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICL 452
+ KG V ++ R + + +F P+ +LD+ G F+K F F G R C
Sbjct: 362 FLPKGTEVFPMLGSVLRDPRFF-SNPRDFNPQHFLDKKGQFKKSD--AFVPFSIGKRYCF 418
Query: 453 GKEFAYRQMKIYSAVLLSCFKFR 475
G+ A ++ ++ ++ F+F+
Sbjct: 419 GEGLARMELFLFFTTIMQNFRFK 441
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 87/418 (20%), Positives = 170/418 (40%), Gaps = 55/418 (13%)
Query: 97 FDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNA 154
F G + I K L GI + +G++W+E R+ FS LR+F +
Sbjct: 76 FSGRGNSPISQRITKGL---GIISSNGKRWKEIRR-----FSLTTLRNFGMGKRSIEDRV 127
Query: 155 AKLAQLLSEAANSDKILDIQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFD 212
+ A L E K F+ + + I V F D ++ F+
Sbjct: 128 QEEAHCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQKRFDY---KDQNFLTLMKRFN 184
Query: 213 DASAMTLWRYVDIFWKIKKLLNI--GSEARLKQRIEVIDTFVYKIIRKK-----TDQMHD 265
+ + ++ + L++ G+ ++ + + + +++ + +++ + D
Sbjct: 185 ENFRILNSPWIQVCNNFPLLIDCFPGTHNKVLKNVALTRSYIREKVKEHQASLDVNNPRD 244
Query: 266 FQEEY---TSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPA 322
F + + +K++ S F + + L + + +AG +TT+ TL + + +L KHP
Sbjct: 245 FIDCFLIKMEQEKDNQKSEF----NIENLVGTVADLFVAGTETTSTTLRYGLLLLLKHPE 300
Query: 323 VQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMC 382
V K+ +E+ G + C+ + + M Y A + E R VP
Sbjct: 301 VTAKVQEEIDHVIGRHR-------SPCMQDRS--HMPYTDAVVHEIQRYSDLVPTGVPHA 351
Query: 383 FSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAE-----EFKPERWLDENGIFQKES 437
+ DT + + KG + M + + DD E F P +LD+NG F+K
Sbjct: 352 VTTDTKFRNYLIPKGTTI------MALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSD 405
Query: 438 PFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR----LRNVSETVNYRTMINL 491
F F AG RIC G+ A ++ ++ +L F + L+N++ T + +++L
Sbjct: 406 --YFMPFSAGKRICAGEGLARMELFLFLTTILQNFNLKSVDDLKNLNTTAVTKGIVSL 461
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 136/336 (40%), Gaps = 65/336 (19%)
Query: 172 DIQDLFMKSTLDSIFKVAFGVELDSVCGS-NEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
DI++ +SI V FG L + + N E +F A +F
Sbjct: 159 DIKEDLFHFAFESITNVMFGERLGMLEETVNPEAQKFIDAV-----------YKMFHTSV 207
Query: 231 KLLNIGSEARLKQRIEVIDTFVYKIIRKKT--------DQMHDFQEEYTSMKKEDILSRF 282
LLN+ E +Y++ R KT D + + E+YT + +D+ +
Sbjct: 208 PLLNVPPE-------------LYRLFRTKTWRDHVAAWDTIFNKAEKYTEIFYQDLRRKT 254
Query: 283 -----------LQVTDPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIV 328
L ++ L D+ I + G +TT+ TL W +Y + + VQE +
Sbjct: 255 EFRNYPGILYCLLKSEKMLLEDVKANITEMLAGGVNTTSMTLQWHLYEMARSLNVQEMLR 314
Query: 329 QEVKEA--TGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDD 386
+EV A DIS L++ L A+I ETLRL+P + SD
Sbjct: 315 EEVLNARRQAEGDISKMLQMVPL-----------LKASIKETLRLHPISVTLQRYPESDL 363
Query: 387 TLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQA 446
L D + + +V YAMGR + ++F P RWL ++ F+ F
Sbjct: 364 VLQD-YLIPAKTLVQVAIYAMGRDPAFFS-SPDKFDPTRWLSKDKDLIH---FRNLGFGW 418
Query: 447 GPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSET 482
G R C+G+ A +M ++ +L FK ++++ +
Sbjct: 419 GVRQCVGRRIAELEMTLFLIHILENFKVEMQHIGDV 454
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/378 (20%), Positives = 159/378 (42%), Gaps = 44/378 (11%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDKILD 172
G GI +G+KW+E R+ FS LR+F + + A+ L E K
Sbjct: 90 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASP 144
Query: 173 IQDLFMK--STLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
F+ + + I + F D +++ ++ + ++ ++
Sbjct: 145 CDPTFILGCAPCNVICSIIFHKRFDY---KDQQFLNLMEKLNENIEILSSPWIQVYNNFP 201
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEYTSMKKEDILSRFL 283
LL+ G+ +L + + + +++ + +++ + M DF + + +++ ++
Sbjct: 202 ALLDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS 261
Query: 284 QVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDF 343
+ T + L + ++ AG +TT+ TL + + +L KHP V K+ +E++ G
Sbjct: 262 EFTI-ESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR---- 316
Query: 344 LKVAGCISEEALEKMHYLHAAITETLR---LYPAVPVDAKMC---FSDDTLPDGFSVRKG 397
+ C+ + + M Y A + E R L P A C F + +P G ++
Sbjct: 317 ---SPCMQDRS--HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI--- 368
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFA 457
++ + +F + E F P +LDE G F+K F F AG RIC+G+ A
Sbjct: 369 -LISLTSVLHDNKEF---PNPEMFDPHHFLDEGGNFKKSK--YFMPFSAGKRICVGEALA 422
Query: 458 YRQMKIYSAVLLSCFKFR 475
++ ++ +L F +
Sbjct: 423 GMELFLFLTSILQNFNLK 440
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 78/178 (43%), Gaps = 17/178 (9%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAK---DISDFLKVAGCISEEALEK 357
AG DT +SW + L P +Q KI +E+ G + +SD +
Sbjct: 293 AGFDTVTTAISWSLMYLVTKPEIQRKIQKELDTVIGRERRPRLSD------------RPQ 340
Query: 358 MHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDD 417
+ YL A I ET R +P + DT +GF + K V + + +W +D
Sbjct: 341 LPYLEAFILETFRHSSFLPFTIPHSTTRDTTLNGFYIPKKCCVFVNQWQVNHDPELW-ED 399
Query: 418 AEEFKPERWLDENGI-FQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKF 474
EF+PER+L +G K K F G R C+G+ A ++ ++ A+LL +F
Sbjct: 400 PSEFRPERFLTADGTAINKPLSEKMMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEF 457
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/233 (23%), Positives = 96/233 (41%), Gaps = 42/233 (18%)
Query: 248 IDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTA 307
ID F+ K+ ++K +Q +F E + D+L AG +TT+
Sbjct: 247 IDCFLIKMEKEKQNQQSEFTIENLVITAADLLG--------------------AGTETTS 286
Query: 308 ATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITE 367
TL + + +L KHP V K+ +E++ G + C+ + M Y A + E
Sbjct: 287 TTLRYALLLLLKHPEVTAKVQEEIERVVGRNR-------SPCMQDRG--HMPYTDAVVHE 337
Query: 368 TLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGD-----DAEEFK 422
R +P + D + + KG + + + + D + E F
Sbjct: 338 VQRYIDLIPTSLPHAVTCDVKFRNYLIPKGTTI------LTSLTSVLHDNKEFPNPEMFD 391
Query: 423 PERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 475
P +LDE G F+K + F F AG RIC+G+ A ++ ++ +L F +
Sbjct: 392 PRHFLDEGGNFKKSN--YFMPFSAGKRICVGEGLARMELFLFLTFILQNFNLK 442
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 77/378 (20%), Positives = 158/378 (41%), Gaps = 44/378 (11%)
Query: 115 GDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSA--AFRKNAAKLAQLLSEAANSDKILD 172
G GI +G+KW+E R+ FS LR+F + + A+ L E K
Sbjct: 92 GFGIVFSNGKKWKEIRR-----FSLMTLRNFGMGKRSIEDRVQEEARCLVEELRKTKASP 146
Query: 173 IQDLFM--KSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKIK 230
F+ + + I + F D +++ ++ + ++ I
Sbjct: 147 CDPTFILGCAPCNVICSIIFHKRFDY---KDQQFLNLMEKLNENIKILSSPWIQICNNFS 203
Query: 231 KLLNI--GSEARLKQRIEVIDTFVYKIIRKKTDQM-----HDFQEEYTSMKKEDILSRFL 283
+++ G+ +L + + + +++ + +++ + M DF + + +++ ++
Sbjct: 204 PIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMDMNNPQDFIDCFLMKMEKEKHNQPS 263
Query: 284 QVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDF 343
+ T + L + ++ AG +TT+ TL + + +L KHP V K+ +E++ G
Sbjct: 264 EFTI-ESLENTAVDLFGAGTETTSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNR---- 318
Query: 344 LKVAGCISEEALEKMHYLHAAITETLR---LYPAVPVDAKMC---FSDDTLPDGFSVRKG 397
+ C+ + + M Y A + E R L P A C F + +P G ++
Sbjct: 319 ---SPCMQDRS--HMPYTDAVVHEVQRYIDLLPTSLPHAVTCDIKFRNYLIPKGTTI--- 370
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFA 457
++ + +F + E F P +LDE G F+K F F AG RIC+G+ A
Sbjct: 371 -LISLTSVLHDNKEF---PNPEMFDPHHFLDEGGNFKKSK--YFMPFSAGKRICVGEALA 424
Query: 458 YRQMKIYSAVLLSCFKFR 475
++ ++ +L F +
Sbjct: 425 GMELFLFLTSILQNFNLK 442
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 458
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 459 RQMKIYSAVLLSCFKFRLRNVSET 482
Q+K +VLL ++F + E+
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES 425
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 458
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 459 RQMKIYSAVLLSCFKFRLRNVSET 482
Q+K +VLL ++F + E+
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES 425
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 458
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 459 RQMKIYSAVLLSCFKFRLRNVSET 482
Q+K +VLL ++F + E+
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES 425
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 111/264 (42%), Gaps = 22/264 (8%)
Query: 222 YVDIFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQM-HDFQEEYTSMKKEDILS 280
YVD + I+ EAR V D +I TD+ D + ++K E
Sbjct: 181 YVDPYLPIESFRR-RDEARNGLVALVADIMNGRIANPPTDKSDRDMLDVLIAVKAETGTP 239
Query: 281 RFLQVTDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDI 340
RF + + ++ + AG T++ T SW + L +H ++ E+ E G
Sbjct: 240 RF----SADEITGMFISMMFAGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGD--- 292
Query: 341 SDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMV 400
+S AL ++ L + ETLRL+P + + ++ + + G + +GD+V
Sbjct: 293 ------GRSVSFHALRQIPQLENVLKETLRLHPPLIILMRVAKGEFEV-QGHRIHEGDLV 345
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFT--AFQAGPRICLGKEFAY 458
R+ + D +F P R+ Q++ ++T F AG C+G FA
Sbjct: 346 AASPAISNRIPEDF-PDPHDFVPARYEQPR---QEDLLNRWTWIPFGAGRHRCVGAAFAI 401
Query: 459 RQMKIYSAVLLSCFKFRLRNVSET 482
Q+K +VLL ++F + E+
Sbjct: 402 MQIKAIFSVLLREYEFEMAQPPES 425
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 82/176 (46%), Gaps = 14/176 (7%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
AG +TT+ TL + + +L KHP V ++ +E++ G + C+ + + +M Y
Sbjct: 276 AGTETTSTTLRYSLLLLLKHPEVAARVQEEIERVIGRHR-------SPCMQDRS--RMPY 326
Query: 361 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG-DMVCYQAYAMGRMKFIWGDDAE 419
A I E R +P + + D + + KG D++ + K + +
Sbjct: 327 TDAVIHEIQRFIDLLPTNLPHAVTRDVRFRNYFIPKGTDIITSLTSVLHDEKAF--PNPK 384
Query: 420 EFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFR 475
F P +LDE+G F+K F F AG R+C+G+ A ++ ++ +L FK +
Sbjct: 385 VFDPGHFLDESGNFKKSD--YFMPFSAGKRMCVGEGLARMELFLFLTSILQNFKLQ 438
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 86/212 (40%), Gaps = 52/212 (24%)
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEAL 355
+ ++AG +T A+ L+W +L P Q+++ + + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------------- 255
Query: 356 EKMHYLHAAITETLRLYPAVPV-----DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
AA E LRLYP + + + +D LP G + + Y R+
Sbjct: 256 -------AAFQEALRLYPPAWILTRRLERPLLLGEDRLPPGTT------LVLSPYVTQRL 302
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 470
F D E F+PER+L+E G ++ F G R+CLG++FA + ++L
Sbjct: 303 HF---PDGEAFRPERFLEERGTPSG----RYFPFGLGQRLCLGRDFAL----LEGPIVLR 351
Query: 471 CF--KFRLRNVSETVNYRTMINLHIDGGLHVR 500
F +FRL + + L +GGL R
Sbjct: 352 AFFRRFRLDPLP-FPRVLAQVTLRPEGGLPAR 382
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 85 DPANVEYMLKTNFDNYGKGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRD 144
DP VE L + K ++ Y L L G G+ T GE W+E RK F K +R
Sbjct: 48 DPEGVEGALLA--EGTTKATFQYRALSRLTGRGLLTDWGESWKEARKALKDPFLPKNVRG 105
Query: 145 FSSA 148
+ A
Sbjct: 106 YREA 109
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEA 354
A + T W ++ + ++P + +EVK E G K + + G C+S+
Sbjct: 268 ASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAE 322
Query: 355 LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL--PDG-FSVRKGDMVCYQAYAMGRMK 411
L + L + I E+LRL A ++ + D TL DG +++RK D++ M
Sbjct: 323 LNDLPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 412 FIWGDDAEEFKPERWLDENGIFQK-------ESPFKFTAFQAGPRICLGKEFAYRQMKIY 464
I+ D FK +R+LDENG + + + + F +G IC G+ FA ++K +
Sbjct: 382 EIYPDPLT-FKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 465 SAVLLSCFKFRL 476
++LS F+ L
Sbjct: 441 LILMLSYFELEL 452
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 90/192 (46%), Gaps = 23/192 (11%)
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVK---EATGAKDISDFLKVAG---CISEEA 354
A + T W ++ + ++P + +EVK E G K + + G C+S+
Sbjct: 268 ASQANTIPATFWSLFQMIRNPEAMKAATEEVKRTLENAGQK-----VSLEGNPICLSQAE 322
Query: 355 LEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTL--PDG-FSVRKGDMVCYQAYAMGRMK 411
L + L + I E+LRL A ++ + D TL DG +++RK D++ M
Sbjct: 323 LNDLPVLDSIIKESLRLSSAS-LNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDP 381
Query: 412 FIWGDDAEEFKPERWLDENGIFQK-------ESPFKFTAFQAGPRICLGKEFAYRQMKIY 464
I+ D FK +R+LDENG + + + + F +G IC G+ FA ++K +
Sbjct: 382 EIYPDPLT-FKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQF 440
Query: 465 SAVLLSCFKFRL 476
++LS F+ L
Sbjct: 441 LILMLSYFELEL 452
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/212 (24%), Positives = 85/212 (40%), Gaps = 52/212 (24%)
Query: 296 LNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEAL 355
+ ++AG +T A+ L+W +L P Q+++ + + A
Sbjct: 216 VTLLVAGHETVASALTWSFLLLSHRPDWQKRVAESEEAAL-------------------- 255
Query: 356 EKMHYLHAAITETLRLYPAVPV-----DAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRM 410
AA E LRLYP + + + +D LP +G + Y R+
Sbjct: 256 -------AAFQEALRLYPPAWILTRRLERPLLLGEDRLP------QGTTLVLSPYVTQRL 302
Query: 411 KFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLS 470
F + E F+PER+L E G ++ F G R+CLG++FA + ++L
Sbjct: 303 YF---PEGEAFQPERFLAERGTPSG----RYFPFGLGQRLCLGRDFAL----LEGPIVLR 351
Query: 471 CF--KFRLRNVSETVNYRTMINLHIDGGLHVR 500
F +FRL + + L +GGL R
Sbjct: 352 AFFRRFRLDPLP-FPRVLAQVTLRPEGGLPAR 382
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 60/123 (48%), Gaps = 20/123 (16%)
Query: 348 GCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGFSVRKGDMV-CYQ 403
G ++ EA+E+M + + E+LR+ P VP AK F+ ++ F V+KG+M+ YQ
Sbjct: 317 GNVTLEAIEQMPLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQ 376
Query: 404 AYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRI---------CLGK 454
+A K D EE+ P+R++ + E+ K+ + GP C GK
Sbjct: 377 PFATKDPKVF--DRPEEYVPDRFVGDG-----EALLKYVWWSNGPETESPTVENKQCAGK 429
Query: 455 EFA 457
+F
Sbjct: 430 DFV 432
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 78/196 (39%), Gaps = 41/196 (20%)
Query: 288 PKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVA 347
P+ LRD +L + AG +TT + ++ L P Q +V++ E T A
Sbjct: 229 PEELRDTLLLMISAGYETTVNVIDQAVHTLLTRPD-QLALVRK-GEVTWAD--------- 277
Query: 348 GCISEEALEKMHYLHAAITETLRLYPAVP-VDAKMCFSDDTLPDGFSVRKGDMVCYQAYA 406
+ ETLR PAV + + +D LPDG ++ +G+ + +YA
Sbjct: 278 ----------------VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPIL-ASYA 320
Query: 407 MGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSA 466
W +DA+ F R + E+ AF G CLG A ++ +
Sbjct: 321 AANRHPDWHEDADTFDATRTVKEH-----------LAFGHGVHFCLGAPLARMEVTLALE 369
Query: 467 VLLSCFK-FRLRNVSE 481
L F RL + +E
Sbjct: 370 SLFGRFPDLRLADPAE 385
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 52/397 (13%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
YS + + G+G+ + + REQ + E + ++F A + K AA
Sbjct: 76 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA-IQHEVRKFM-----AA 129
Query: 166 NSDK-------ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMT 218
N DK + D + + + +F LD+ RF+ +
Sbjct: 130 NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--------RRFAQLLAKMESSL 181
Query: 219 LWRYVDIFWKIKKLLNIGSEARLKQ-RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKED 277
+ +F I L + AR + R E+ II +K ++++ ++ TS
Sbjct: 182 I--PAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN--KDSSTSDLLSG 237
Query: 278 ILSRFLQVTDPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA 334
+LS + P L ++ I+ + AG+ T++ T +W + L HPA K ++ ++
Sbjct: 238 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPA-NVKHLEALR-- 293
Query: 335 TGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSV 394
K+I +F A +++M + E++R P + + + +D + + V
Sbjct: 294 ---KEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVV 347
Query: 395 RKGDMVCYQAYAMGRMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLG 453
KGD++ + D E F +P RW E ++ F F AG C+G
Sbjct: 348 PKGDIIACSP-------LLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIG 397
Query: 454 KEFAYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
++F Q+K A + F+ LR+ +Y TM+
Sbjct: 398 QKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 434
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 52/397 (13%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
YS + + G+G+ + + REQ + E + ++F A + K AA
Sbjct: 77 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA-IQHEVRKFM-----AA 130
Query: 166 NSDK-------ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMT 218
N DK + D + + + +F LD+ RF+ +
Sbjct: 131 NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--------RRFAQLLAKMESSL 182
Query: 219 LWRYVDIFWKIKKLLNIGSEARLKQ-RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKED 277
+ +F I L + AR + R E+ II +K ++++ ++ TS
Sbjct: 183 I--PAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN--KDSSTSDLLSG 238
Query: 278 ILSRFLQVTDPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA 334
+LS + P L ++ I+ + AG+ T++ T +W + L HPA K ++ ++
Sbjct: 239 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPA-NVKHLEALR-- 294
Query: 335 TGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSV 394
K+I +F A +++M + E++R P + + + +D + + V
Sbjct: 295 ---KEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVV 348
Query: 395 RKGDMVCYQAYAMGRMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLG 453
KGD++ + D E F +P RW E ++ F F AG C+G
Sbjct: 349 PKGDIIACSP-------LLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIG 398
Query: 454 KEFAYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
++F Q+K A + F+ LR+ +Y TM+
Sbjct: 399 QKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 435
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/252 (20%), Positives = 94/252 (37%), Gaps = 47/252 (18%)
Query: 249 DTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVIAGKDTTAA 308
D V I ++K + D + + +L + LR ++ ++AG +TT
Sbjct: 208 DYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDY-------ELRTLVATVLVAGYETTNH 260
Query: 309 TLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITET 368
L+ +Y +HP KI + + A A+ E
Sbjct: 261 QLALAMYDFAQHPDQWMKIKENPELAP---------------------------QAVEEV 293
Query: 369 LRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPERWLD 428
LR P +PV A ++D +G + G V A+ R ++ DA+ F
Sbjct: 294 LRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFA-DADRF------- 345
Query: 429 ENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTM 488
+ ++E+P AF GP CLG A ++++ AV + ++ + +R
Sbjct: 346 -DITVKREAP--SIAFGGGPHFCLGTALA--RLELTEAVAALATRLDPPQIAGEITWRHE 400
Query: 489 INLHIDGGLHVR 500
+ + L +R
Sbjct: 401 LGVAGPDALPLR 412
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 52/397 (13%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
YS + + G+G+ + + REQ + E + ++F A + K AA
Sbjct: 76 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA-IQHEVRKFM-----AA 129
Query: 166 NSDK-------ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMT 218
N DK + D + + + +F LD+ RF+ +
Sbjct: 130 NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--------RRFAQLLAKMESSL 181
Query: 219 LWRYVDIFWKIKKLLNIGSEARLKQ-RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKED 277
+ +F I L + AR + R E+ II +K ++++ ++ TS
Sbjct: 182 I--PAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN--KDSSTSDLLSG 237
Query: 278 ILSRFLQVTDPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA 334
+LS + P L ++ I+ + AG+ T++ T +W + L HPA K ++ ++
Sbjct: 238 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPA-NVKHLEALR-- 293
Query: 335 TGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSV 394
K+I +F A +++M + E++R P + + + +D + + V
Sbjct: 294 ---KEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVV 347
Query: 395 RKGDMVCYQAYAMGRMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLG 453
KGD++ + D E F +P RW E ++ F F AG C+G
Sbjct: 348 PKGDIIACSP-------LLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIG 397
Query: 454 KEFAYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
++F Q+K A + F+ LR+ +Y TM+
Sbjct: 398 QKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 434
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 52/397 (13%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
YS + + G+G+ + + REQ + E + ++F A + K AA
Sbjct: 75 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA-IQHEVRKFM-----AA 128
Query: 166 NSDK-------ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMT 218
N DK + D + + + +F LD+ RF+ +
Sbjct: 129 NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--------RRFAQLLAKMESSL 180
Query: 219 LWRYVDIFWKIKKLLNIGSEARLKQ-RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKED 277
+ +F I L + AR + R E+ II +K ++++ ++ TS
Sbjct: 181 I--PAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN--KDSSTSDLLSG 236
Query: 278 ILSRFLQVTDPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA 334
+LS + P L ++ I+ + AG+ T++ T +W + L HPA K ++ ++
Sbjct: 237 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPA-NVKHLEALR-- 292
Query: 335 TGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSV 394
K+I +F A +++M + E++R P + + + +D + + V
Sbjct: 293 ---KEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVV 346
Query: 395 RKGDMVCYQAYAMGRMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLG 453
KGD++ + D E F +P RW E ++ F F AG C+G
Sbjct: 347 PKGDIIACSP-------LLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIG 396
Query: 454 KEFAYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
++F Q+K A + F+ LR+ +Y TM+
Sbjct: 397 QKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 433
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/397 (21%), Positives = 160/397 (40%), Gaps = 52/397 (13%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
YS + + G+G+ + + REQ + E + ++F A + K AA
Sbjct: 89 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPA-IQHEVRKFM-----AA 142
Query: 166 NSDK-------ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMT 218
N DK + D + + + +F LD+ RF+ +
Sbjct: 143 NWDKDEGEINLLEDCSTMIINTACQCLFGEDLRKRLDA--------RRFAQLLAKMESSL 194
Query: 219 LWRYVDIFWKIKKLLNIGSEARLKQ-RIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKED 277
+ +F I L + AR + R E+ II +K ++++ ++ TS
Sbjct: 195 I--PAAVFLPILLKLPLPQSARCHEARTELQKILSEIIIARKEEEVN--KDSSTSDLLSG 250
Query: 278 ILSRFLQVTDPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEA 334
+LS + P L ++ I+ + AG+ T++ T +W + L HPA K ++ ++
Sbjct: 251 LLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPA-NVKHLEALR-- 306
Query: 335 TGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSV 394
K+I +F A +++M + E++R P + + + +D + + V
Sbjct: 307 ---KEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV-GSYVV 360
Query: 395 RKGDMVCYQAYAMGRMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGPRICLG 453
KGD++ + D E F +P RW E ++ F F AG C+G
Sbjct: 361 PKGDIIACSP-------LLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGVHKCIG 410
Query: 454 KEFAYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
++F Q+K A + F+ LR+ +Y TM+
Sbjct: 411 QKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 447
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 74/391 (18%), Positives = 144/391 (36%), Gaps = 70/391 (17%)
Query: 110 LKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAANSDK 169
++D + D + ++DG R R +++H F+ + R + F ++ + QL+ + D
Sbjct: 82 VRDFMVDFLQSLDGADHRRLRGLATHPFTPR--RITAVQPFVRSTVE--QLIDKLPQGD- 136
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDIFWKI 229
D F + G L+ + T + + + L DI K+
Sbjct: 137 -FDFVQHFAHPLPALVMCQLLGFPLE------DYDTVGRLSIETNLGLALSNDQDILVKV 189
Query: 230 KKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPK 289
++ L + D V I ++K + D + + +L +
Sbjct: 190 EQGLG-----------RMFDYLVAAIEKRKVEPGDDLTSDIVRAFHDGVLDDY------- 231
Query: 290 YLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGC 349
LR ++ ++AG +TT L+ +Y +HP KI + + A
Sbjct: 232 ELRTLVATVLVAGYETTNHQLALAMYDFAQHPDQWMKIKENPELAP-------------- 277
Query: 350 ISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGR 409
A+ E LR P +PV A ++D +G + G V A+ R
Sbjct: 278 -------------QAVEEVLRWSPTLPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHR 324
Query: 410 MKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLL 469
++ DA+ F + ++E+P AF GP CLG A ++++ AV
Sbjct: 325 DPRVFA-DADRF--------DITVKREAP--SIAFGGGPHFCLGTALA--RLELTEAVAA 371
Query: 470 SCFKFRLRNVSETVNYRTMINLHIDGGLHVR 500
+ ++ + +R + + L +R
Sbjct: 372 LATRLDPPQIAGEITWRHELGVAGPDALPLR 402
>pdb|3OFU|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|D Chain D, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|E Chain E, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFU|F Chain F, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|B Chain B, Crystal Structure Of Cytochrome P450 Cyp101c1
pdb|3OFT|C Chain C, Crystal Structure Of Cytochrome P450 Cyp101c1
Length = 396
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/224 (21%), Positives = 84/224 (37%), Gaps = 44/224 (19%)
Query: 241 LKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQVTDPKYLRDIILNFVI 300
++Q + D +++ I K+ Q D + ++ + E + R V + R + N +
Sbjct: 179 VEQLKQAADDYLWPFIEKRMAQPGD--DLFSRILSEPVGGRPWTVDE---ARRMCRNLLF 233
Query: 301 AGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHY 360
G DT AA + L +HP Q + E+
Sbjct: 234 GGLDTVAAMIGMVALHLARHPEDQRLL---------------------------RERPDL 266
Query: 361 LHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEE 420
+ AA E +R YP V V D DG ++RKGD+V Y + + + EE
Sbjct: 267 IPAAADELMRRYPTVAVSRNAVADVDA--DGVTIRKGDLV-YLPSVLHNLDPASFEAPEE 323
Query: 421 FKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIY 464
+ +R L +P + T G C+G A ++ ++
Sbjct: 324 VRFDRGL---------APIRHTTMGVGAHRCVGAGLARMEVIVF 358
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 96/222 (43%), Gaps = 29/222 (13%)
Query: 277 DILSRFLQVT----DPKYLRDI---ILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQ 329
D+LS L P L ++ I+ + AG+ T++ T +W + L HPA K ++
Sbjct: 246 DLLSGLLSAVYRDGTPMSLHEVCGMIVAAMFAGQHTSSITTTWSMLHL-MHPA-NVKHLE 303
Query: 330 EVKEATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLP 389
++ K+I +F A +++M + E++R P + + + +D +
Sbjct: 304 ALR-----KEIEEF--PAQLNYNNVMDEMPFAERCARESIRRDPPLLMLMRKVMADVKV- 355
Query: 390 DGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEF-KPERWLDENGIFQKESPFKFTAFQAGP 448
+ V KGD++ + D E F +P RW E ++ F F AG
Sbjct: 356 GSYVVPKGDIIACSP-------LLSHHDEEAFPEPRRWDPER---DEKVEGAFIGFGAGV 405
Query: 449 RICLGKEFAYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
C+G++F Q+K A + F+ LR+ +Y TM+
Sbjct: 406 HKCIGQKFGLLQVKTILATAFRSYDFQLLRDEVPDPDYHTMV 447
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/382 (17%), Positives = 145/382 (37%), Gaps = 90/382 (23%)
Query: 111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-QLLSEAANSDK 169
+++ G+ ++D + R++ F+ + + + R A ++A +L+ + A + +
Sbjct: 96 PEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHELVDQMAATGQ 150
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDI---- 225
D+ +F + + GV ++ TR+S AF + +T +
Sbjct: 151 PADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTAEEMQEAAEQA 206
Query: 226 FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV 285
+ + L++ ++R E D V +++ + Q S+ ++++L
Sbjct: 207 YAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSEQELL------ 245
Query: 286 TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLK 345
D+ + ++AG ++T ++ F+Y+L P ++ ++
Sbjct: 246 -------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQL------------------ 280
Query: 346 VAGCISEEALEKMHYLHAAITETLRLYP-----AVPVDAKMCFSDDTLPDGFSVRKGDMV 400
L++ + +A+ E R P AVP + D TL G ++R G+ V
Sbjct: 281 ---------LDRPELIPSAVEELTRWVPLGVGTAVP---RYAVEDVTL-RGVTIRAGEPV 327
Query: 401 CYQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQ 460
A R D +F D + I +P + F G CLG A +
Sbjct: 328 LASTGAANR-------DQAQFP-----DADRIDVDRTPNQHLGFGHGVHHCLGAPLARVE 375
Query: 461 MKIYSAVLLSCFKFRLRNVSET 482
+++ VLL + ET
Sbjct: 376 LQVALEVLLQRLPGIRLGIPET 397
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 337 AKDISDFLKV-AGCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGF 392
A++I +K G ++ A+EKM + + E LR P V AK ++ F
Sbjct: 322 AEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAF 381
Query: 393 SVRKGDMV-CYQAYAMGRMKFIWGDDAEEFKPERWLDENG------IFQKESPFKFTAFQ 445
V+ G+M+ YQ A K D A+EF PER++ E G + P T
Sbjct: 382 KVKAGEMLYGYQPLATRDPKIF--DRADEFVPERFVGEEGEKLLRHVLWSNGPETETP-T 438
Query: 446 AGPRICLGKEFAYRQMKIY 464
G + C GK+F +++
Sbjct: 439 VGNKQCAGKDFVVLVARLF 457
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 337 AKDISDFLKV-AGCISEEALEKMHYLHAAITETLRLYPAVPVD---AKMCFSDDTLPDGF 392
A++I +K G ++ A+EKM + + E LR P V AK ++ F
Sbjct: 322 AEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIESHDAAF 381
Query: 393 SVRKGDMV-CYQAYAMGRMKFIWGDDAEEFKPERWLDENG------IFQKESPFKFTAFQ 445
V+ G+M+ YQ A K D A+EF PER++ E G + P T
Sbjct: 382 KVKAGEMLYGYQPLATRDPKIF--DRADEFVPERFVGEEGEKLLRHVLWSNGPETETP-T 438
Query: 446 AGPRICLGKEFAYRQMKIY 464
G + C GK+F +++
Sbjct: 439 VGNKQCAGKDFVVLVARLF 457
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 77/398 (19%), Positives = 146/398 (36%), Gaps = 54/398 (13%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
YS + + G+G+ + + REQ + E + ++F+ + ++ + +
Sbjct: 75 YSFMVPVFGEGVAYAAPYPRMREQLNFLAEELTVAKFQNFAPSI----QHEVRKFMKANW 130
Query: 166 NSDK-ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD 224
N D+ ++I D +++ + FG +L + +F+ + + V
Sbjct: 131 NKDEGEINILDDCSAMIINTACQCLFGEDLRK----RLDARQFAQLLAKMESCLIPAAVF 186
Query: 225 IFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQ 284
+ W +K L R R E+ D II ++ + E D+L+ L
Sbjct: 187 LPWILKLPLPQSYRCR-DARAELQDILSEIIIAREKE------EAQKDTNTSDLLAGLLG 239
Query: 285 VTDPKYLR-------DIILNFVIAGKDTTAATLSWFIYMLC-----KHPAVQEKIVQEVK 332
R +I+ + AG+ T+ T +W + L +H A K+ QE+
Sbjct: 240 AVYRDGTRMSQHEVCGMIVAAMFAGQHTSTITTTWSLLHLMDPRNKRHLA---KLHQEID 296
Query: 333 EATGAKDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGF 392
E + + +E+M + E++R P + + +
Sbjct: 297 EFPAQLNYDN-----------VMEEMPFAEQCARESIRRDPPLVMLMRKVLK-------- 337
Query: 393 SVRKGDMVCYQAYAMGRMKFIWGDDAEEFK-PERWLDENGIFQKESPFKFTAFQAGPRIC 451
V+ G V + + + D E F P W E + K F F AG C
Sbjct: 338 PVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPERNM--KLVDGAFCGFGAGVHKC 395
Query: 452 LGKEFAYRQMKIYSAVLLSCFKFRLRNVSETVNYRTMI 489
+G++F Q+K A +L + F L NY TM+
Sbjct: 396 IGEKFGLLQVKTVLATVLRDYDFELLGPLPEPNYHTMV 433
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/378 (17%), Positives = 142/378 (37%), Gaps = 82/378 (21%)
Query: 111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-QLLSEAANSDK 169
+++ G+ ++D + R++ F+ + + + R A ++A +L+ + A + +
Sbjct: 96 PEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHELVDQMAATGQ 150
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDI---- 225
D+ +F + + GV ++ TR+S AF + +T +
Sbjct: 151 PADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTAEEMQEAAEQA 206
Query: 226 FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV 285
+ + L++ ++R E D V +++ + Q S+ ++++L
Sbjct: 207 YAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSEQELL------ 245
Query: 286 TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLK 345
D+ + ++AG ++T ++ F+Y+L P ++ ++
Sbjct: 246 -------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQL------------------ 280
Query: 346 VAGCISEEALEKMHYLHAAITETLRLYP-AVPVDAKMCFSDDTLPDGFSVRKGDMVCYQA 404
L++ + +A+ E R P V A +D G ++R G+ V
Sbjct: 281 ---------LDRPELIPSAVEELTRWVPLGVGTAAPRYAVEDVTLRGVTIRAGEPVLAST 331
Query: 405 YAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIY 464
A R D +F D + I +P + F G CLG A ++++
Sbjct: 332 GAANR-------DQAQFP-----DADRIDVDRTPNQHLGFGHGVHHCLGAPLARVELQVA 379
Query: 465 SAVLLSCFKFRLRNVSET 482
VLL + ET
Sbjct: 380 LEVLLQRLPGIRLGIPET 397
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 46/394 (11%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
Y+I+ + G+G+ + + REQ + E + ++F A ++ + ++E
Sbjct: 80 YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI----QHEVRKFMAENW 135
Query: 166 NSDK-ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD 224
D+ ++++ + +++ + FG +L + F+ + + V
Sbjct: 136 KEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARH----FAQLLSKMESSLIPAAVF 191
Query: 225 IFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQ 284
+ W ++ L + AR ++ + + +II + + +E D+L L+
Sbjct: 192 MPWLLR--LPLPQSARCREARAELQKILGEIIVAR-----EKEEASKDNNTSDLLGGLLK 244
Query: 285 VTDPKYLR-------DIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
R +I+ + AG+ T+ T SW + L HP +K + ++
Sbjct: 245 AVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPK-NKKWLDKLH----- 297
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K+I +F A + +++M + + E++R P + + +M ++ + + V KG
Sbjct: 298 KEIDEF--PAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV-GSYVVPKG 354
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFK-PERWLDENGIFQKESPFKFTAFQAGPRICLGKEF 456
D++ + D E F P W E ++ F F AG C+G++F
Sbjct: 355 DIIACSP-------LLSHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKF 404
Query: 457 AYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
A Q+K A + F+ LR+ +Y TM+
Sbjct: 405 ALLQVKTILATAFREYDFQLLRDEVPDPDYHTMV 438
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 46/394 (11%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
Y+I+ + G+G+ + + REQ + E + ++F A ++ + ++E
Sbjct: 74 YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI----QHEVRKFMAENW 129
Query: 166 NSDK-ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD 224
D+ ++++ + +++ + FG +L + F+ + + V
Sbjct: 130 KEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARH----FAQLLSKMESSLIPAAVF 185
Query: 225 IFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQ 284
+ W ++ L + AR ++ + + +II + + +E D+L L+
Sbjct: 186 MPWLLR--LPLPQSARCREARAELQKILGEIIVAR-----EKEEASKDNNTSDLLGGLLK 238
Query: 285 VTDPKYLR-------DIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
R +I+ + AG+ T+ T SW + L HP +K + ++
Sbjct: 239 AVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPK-NKKWLDKLH----- 291
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K+I +F A + +++M + + E++R P + + +M ++ + + V KG
Sbjct: 292 KEIDEF--PAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV-GSYVVPKG 348
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFK-PERWLDENGIFQKESPFKFTAFQAGPRICLGKEF 456
D++ + D E F P W E ++ F F AG C+G++F
Sbjct: 349 DIIACSP-------LLSHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKF 398
Query: 457 AYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
A Q+K A + F+ LR+ +Y TM+
Sbjct: 399 ALLQVKTILATAFREYDFQLLRDEVPDPDYHTMV 432
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/394 (19%), Positives = 161/394 (40%), Gaps = 46/394 (11%)
Query: 107 YSILKDLLGDGI-FTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLAQLLSEAA 165
Y+I+ + G+G+ + + REQ + E + ++F A ++ + ++E
Sbjct: 89 YTIMTPVFGEGVAYAAPYPRMREQLNFLAEELTIAKFQNFVPAI----QHEVRKFMAENW 144
Query: 166 NSDK-ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVD 224
D+ ++++ + +++ + FG +L + F+ + + V
Sbjct: 145 KEDEGVINLLEDCGAMIINTACQCLFGEDLRKRLNARH----FAQLLSKMESSLIPAAVF 200
Query: 225 IFWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQ 284
+ W ++ L + AR ++ + + +II + + +E D+L L+
Sbjct: 201 MPWLLR--LPLPQSARCREARAELQKILGEIIVAR-----EKEEASKDNNTSDLLGGLLK 253
Query: 285 VTDPKYLR-------DIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGA 337
R +I+ + AG+ T+ T SW + L HP +K + ++
Sbjct: 254 AVYRDGTRMSLHEVCGMIVAAMFAGQHTSTITTSWSMLHL-MHPK-NKKWLDKLH----- 306
Query: 338 KDISDFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKG 397
K+I +F A + +++M + + E++R P + + +M ++ + + V KG
Sbjct: 307 KEIDEF--PAQLNYDNVMDEMPFAERCVRESIRRDPPLLMVMRMVKAEVKV-GSYVVPKG 363
Query: 398 DMVCYQAYAMGRMKFIWGDDAEEFK-PERWLDENGIFQKESPFKFTAFQAGPRICLGKEF 456
D++ + D E F P W E ++ F F AG C+G++F
Sbjct: 364 DIIACSP-------LLSHHDEEAFPNPRLWDPER---DEKVDGAFIGFGAGVHKCIGQKF 413
Query: 457 AYRQMKIYSAVLLSCFKFR-LRNVSETVNYRTMI 489
A Q+K A + F+ LR+ +Y TM+
Sbjct: 414 ALLQVKTILATAFREYDFQLLRDEVPDPDYHTMV 447
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 65/381 (17%), Positives = 143/381 (37%), Gaps = 88/381 (23%)
Query: 111 KDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAAFRKNAAKLA-QLLSEAANSDK 169
+++ G+ ++D + R++ F+ + + + R A ++A +L+ + A + +
Sbjct: 96 PEMVKGGLLSMDPPEHSRLRRLVVKAFTAR-----RAESLRPRAREIAHELVDQMAATGQ 150
Query: 170 ILDIQDLFMKSTLDSIFKVAFGVELDSVCGSNEEGTRFSSAFDDASAMTLWRYVDI---- 225
D+ +F + + GV ++ TR+S AF + +T +
Sbjct: 151 PADLVAMFARQLPVRVICELLGVP----SADHDRFTRWSGAFLSTAEVTAEEMQEAAEQA 206
Query: 226 FWKIKKLLNIGSEARLKQRIEVIDTFVYKIIRKKTDQMHDFQEEYTSMKKEDILSRFLQV 285
+ + L++ ++R E D V +++ + Q S+ ++++L
Sbjct: 207 YAYMGDLID-------RRRKEPTDDLVSALVQARDQQ--------DSLSEQELL------ 245
Query: 286 TDPKYLRDIILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLK 345
D+ + ++AG ++T ++ F+Y+L P ++ ++
Sbjct: 246 -------DLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQL------------------ 280
Query: 346 VAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFS----DDTLPDGFSVRKGDMVC 401
L++ + +A+ E R VP+ F +D G ++R G+ V
Sbjct: 281 ---------LDRPELIPSAVEELTRW---VPLGVGTAFPRYAVEDVTLRGVTIRAGEPVL 328
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
A R D +F D + I +P + F G CLG A ++
Sbjct: 329 ASTGAANR-------DQAQFP-----DADRIDVDRTPNQHLGFGHGVHHCLGAPLARVEL 376
Query: 462 KIYSAVLLSCFKFRLRNVSET 482
++ VLL + ET
Sbjct: 377 QVALEVLLQRLPGIRLGIPET 397
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 77/191 (40%), Gaps = 44/191 (23%)
Query: 294 IILNFVIAGKDTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEE 353
+ILN ++A + TL+ IY L +P + ++D L +
Sbjct: 262 LILNVLLAATEPADKTLALMIYHLLNNP----------------EQMNDVLADRSLVPR- 304
Query: 354 ALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFI 413
AI ETLR P V + + S DT+ G ++K +V A R
Sbjct: 305 ----------AIAETLRYKPPVQLIPRQ-LSQDTVVGGMEIKKDTIVFCMIGAANR---- 349
Query: 414 WGDDAEEF-KPERWLDENGIFQKESPF----KFTAFQAGPRICLGKEFAYRQMKIYSAVL 468
D E F +P+ + +S F + AF +G C+G FA +++I + ++
Sbjct: 350 ---DPEAFEQPDVFNIHREDLGIKSAFSGAARHLAFGSGIHNCVGTAFAKNEIEIVANIV 406
Query: 469 LSCFKFRLRNV 479
L ++RN+
Sbjct: 407 LD----KMRNI 413
>pdb|3NV5|A Chain A, Crystal Structure Of Cytochrome P450 Cyp101d2
pdb|3NV6|A Chain A, Crystal Structure Of Camphor-Bound Cyp101d2
Length = 452
Score = 32.3 bits (72), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 59/155 (38%), Gaps = 43/155 (27%)
Query: 304 DTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHA 363
DT LS+F+ L +HP ++V E++ SD LK L
Sbjct: 293 DTVVNFLSFFMIHLARHP----ELVAELR--------SDPLK---------------LMR 325
Query: 364 AITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKP 423
E R +P V +A+M D G +++GDM+ G DDA P
Sbjct: 326 GAEEMFRRFPVV-SEARMVAKDQEY-KGVFLKRGDMILLPTALHGL------DDAA--NP 375
Query: 424 ERW-LDENGIFQKESPFKFTAFQAGPRICLGKEFA 457
E W LD F + S + F GP C G A
Sbjct: 376 EPWKLD----FSRRS-ISHSTFGGGPHRCAGMHLA 405
>pdb|4DXY|A Chain A, Crystal Structures Of Cyp101d2 Y96a Mutant
Length = 417
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 62/161 (38%), Gaps = 43/161 (26%)
Query: 304 DTTAATLSWFIYMLCKHPAVQEKIVQEVKEATGAKDISDFLKVAGCISEEALEKMHYLHA 363
DT LS+F+ L +HP ++V E++ SD LK L
Sbjct: 258 DTVVNFLSFFMIHLARHP----ELVAELR--------SDPLK---------------LMR 290
Query: 364 AITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKP 423
E R +P V +A+M D G +++GDM+ G DDA P
Sbjct: 291 GAEEMFRRFPVV-SEARMVAKDQEY-KGVFLKRGDMILLPTALHGL------DDAA--NP 340
Query: 424 ERW-LDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKI 463
E W LD F + S + F GP C G A ++ +
Sbjct: 341 EPWKLD----FSRRS-ISHSTFGGGPHRCAGMHLARMEVIV 376
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 42/109 (38%), Gaps = 13/109 (11%)
Query: 365 ITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVCYQAYAMGRMKFIWGDDAEEFKPE 424
+ ETLR Y + ++D+ + ++KGD V + R E
Sbjct: 222 VEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANR-------------DE 268
Query: 425 RWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQMKIYSAVLLSCFK 473
+ DE +F+ AF G +CLG A + I +L+ FK
Sbjct: 269 TFFDEPDLFKIGRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHFK 317
>pdb|3OPB|A Chain A, Crystal Structure Of She4p
pdb|3OPB|B Chain B, Crystal Structure Of She4p
Length = 778
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/108 (19%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 42 PIGGTVFNQLLNFNRLHHYMTDLAAKHGTYRLLGPFRSEVYSSDPANVEYMLKTNFDNYG 101
P +F ++L+ + +H ++ + K T LL + ++ + +V Y+L
Sbjct: 103 PFALNLF-EILSRSSIHVFVGCFSNKDATIALLNELQIRIHYGEDTHVTYLLSIILQLLN 161
Query: 102 KGSYNYSILKDLLGDGIFTVDGEKWREQRKISSHEFSTKVLRDFSSAA 149
K YN+ ++ L+ + I + ++ + I E + +DF A
Sbjct: 162 KFKYNFKEVRFLVKELILRISEDEVKSMMLIIFAELQSSFQKDFDKAV 209
>pdb|2A1N|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
pdb|2A1N|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of D251n
Cytochrome P450cam
Length = 415
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 462 KI 463
+
Sbjct: 369 IV 370
>pdb|1QMQ|A Chain A, Optical Detection Of Cytochrome P450 By Sensitizer-Linked
Substrates
pdb|1GJM|A Chain A, Covalent Attachment Of An Electroactive Sulphydryl Reagent
In The Active Site Of Cytochrome P450cam
pdb|1K2O|A Chain A, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1K2O|B Chain B, Cytochrome P450cam With Bound
Bis(2,2'-Bipyridine)-(5-Methyl-2-2'-
Bipyridine)-C2-Adamantane Ruthenium (Ii)
pdb|1T87|A Chain A, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T87|B Chain B, Crystal Structure Of The Ferrous Co-Bound Cytochrome
P450cam (C334a)
pdb|1T88|A Chain A, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|1T88|B Chain B, Crystal Structure Of The Ferrous Cytochrome P450cam
(C334a)
pdb|3L61|A Chain A, Crystal Structure Of Substrate-Free P450cam At 200 Mm [k+]
pdb|3L62|A Chain A, Crystal Structure Of Substrate-Free P450cam At Low [k+]
pdb|3L63|A Chain A, Crystal Structure Of Camphor-Bound P450cam At Low [k+]
pdb|3OIA|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8gluetg-Bio
pdb|3OL5|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized With
A Tethered Substrate Analog 3oh-Adac1-C8-Dans
pdb|3P6M|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6N|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-C8-Dans
pdb|3P6O|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac1-Etg-Dans
pdb|3P6P|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog Adac1-C6-Bio
pdb|3P6Q|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-Etg-Boc
pdb|3P6R|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3oh-Adac1-Etg-Boc
pdb|3P6S|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6T|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac2-C8-Dans
pdb|3P6U|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C6-Dans
pdb|3P6V|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
3et-Adac1-Etg-Boc
pdb|3P6W|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-Etg-Boc
pdb|3P6X|A Chain A, Crystal Structure Of Cytochrome P450cam Crystallized In
The Presence Of A Tethered Substrate Analog
Adac3-C8-Dans
pdb|4G3R|A Chain A, Crystal Structure Of Nitrosyl Cytochrome P450cam
pdb|4G3R|B Chain B, Crystal Structure Of Nitrosyl Cytochrome P450cam
Length = 414
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 462 KI 463
+
Sbjct: 368 IV 369
>pdb|2H7R|A Chain A, L244a Mutant Of Cytochrome P450cam Complexed With
Imidazole
pdb|2H7S|A Chain A, L244a Mutant Of Cytochrome P450cam
pdb|2H7S|C Chain C, L244a Mutant Of Cytochrome P450cam
Length = 414
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 462 KI 463
+
Sbjct: 368 IV 369
>pdb|2A1M|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
pdb|2A1M|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of Wild-Type
Cytochrome P450cam
Length = 415
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 462 KI 463
+
Sbjct: 369 IV 370
>pdb|2A1O|A Chain A, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
pdb|2A1O|B Chain B, Crystal Structure Of Ferrous Dioxygen Complex Of T252a
Cytochrome P450cam
Length = 415
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 263 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 320
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 321 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 368
Query: 462 KI 463
+
Sbjct: 369 IV 370
>pdb|1J51|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|C Chain C, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1J51|D Chain D, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A) WITH 1,3,5-Trichlorobenzene
pdb|1MPW|A Chain A, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|1MPW|B Chain B, Molecular Recognition In (+)-a-pinene Oxidation By
Cytochrome P450cam
pdb|2FRZ|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
pdb|2FRZ|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FV247LC334A)
Length = 414
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 462 KI 463
+
Sbjct: 368 IV 369
>pdb|2GQX|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GQX|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A) WITH PENTACHLOROBENZENE
pdb|2GR6|A Chain A, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
pdb|2GR6|B Chain B, Crystal Structure Of Cytochrome P450cam Mutant
(F87wY96FL244AV247LC334A)
Length = 405
Score = 29.3 bits (64), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 253 EFLAKSPEHRQELIERPERIPAACEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 310
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 311 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 358
Query: 462 KI 463
+
Sbjct: 359 IV 360
>pdb|4EK1|A Chain A, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
pdb|4EK1|B Chain B, Crystal Structure Of Electron-Spin Labeled Cytochrome
P450cam
Length = 414
Score = 29.3 bits (64), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 14/122 (11%)
Query: 342 DFLKVAGCISEEALEKMHYLHAAITETLRLYPAVPVDAKMCFSDDTLPDGFSVRKGDMVC 401
+FL + +E +E+ + AA E LR + V D ++ SD G ++KGD +
Sbjct: 262 EFLAKSPEHRQELIERPERIPAASEELLRRFSLV-ADGRILTSDYEF-HGVQLKKGDQIL 319
Query: 402 YQAYAMGRMKFIWGDDAEEFKPERWLDENGIFQKESPFKFTAFQAGPRICLGKEFAYRQM 461
+ + G D E +D F ++ T F G +CLG+ A R++
Sbjct: 320 LP-------QMLSGLDERENAAPMHVD----FSRQK-VSHTTFGHGSHLCLGQHLARREI 367
Query: 462 KI 463
+
Sbjct: 368 IV 369
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,325,653
Number of Sequences: 62578
Number of extensions: 595721
Number of successful extensions: 1552
Number of sequences better than 100.0: 131
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1250
Number of HSP's gapped (non-prelim): 151
length of query: 504
length of database: 14,973,337
effective HSP length: 103
effective length of query: 401
effective length of database: 8,527,803
effective search space: 3419649003
effective search space used: 3419649003
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 54 (25.4 bits)