Your job contains 1 sequence.
>010683
MKLQHYYYHYYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSL
EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP
VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI
IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV
PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP
ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI
VLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYA
SILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLVRLERFYRNMLAGV
KDKLMKRRIQEIVNECLHSSTIGK
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 010683
(504 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2144291 - symbol:AT5G11580 "AT5G11580" species... 1041 8.1e-140 2
TAIR|locus:2163986 - symbol:UVR8 "UVB-RESISTANCE 8" speci... 219 1.7e-19 2
UNIPROTKB|E2RDC2 - symbol:HERC2 "Uncharacterized protein"... 208 6.3e-18 2
RGD|1307989 - symbol:Herc2 "HECT and RLD domain containin... 207 1.2e-17 2
UNIPROTKB|F1M560 - symbol:Herc2 "Protein Herc2" species:1... 207 1.2e-17 2
UNIPROTKB|G3MX12 - symbol:HERC2 "Uncharacterized protein"... 209 1.3e-17 2
UNIPROTKB|E1B782 - symbol:HERC2 "Uncharacterized protein"... 209 1.3e-17 2
UNIPROTKB|O95714 - symbol:HERC2 "E3 ubiquitin-protein lig... 207 1.7e-17 2
UNIPROTKB|D4ACN3 - symbol:Herc2 "Protein Herc2" species:1... 207 2.1e-17 2
MGI|MGI:103234 - symbol:Herc2 "hect (homologous to the E6... 207 2.1e-17 2
UNIPROTKB|F1N1N9 - symbol:HERC5 "Uncharacterized protein"... 243 4.3e-17 1
ZFIN|ZDB-GENE-030131-7951 - symbol:rcbtb1 "regulator of c... 233 1.8e-16 1
UNIPROTKB|E1BW48 - symbol:HERC2 "Uncharacterized protein"... 226 2.5e-16 2
UNIPROTKB|E1C8K2 - symbol:HERC2 "Uncharacterized protein"... 226 2.5e-16 2
TAIR|locus:2146142 - symbol:AT5G16040 "AT5G16040" species... 169 5.4e-16 2
TAIR|locus:2076532 - symbol:AT3G02300 "AT3G02300" species... 227 6.2e-16 1
FB|FBgn0031107 - symbol:HERC2 "HECT and RLD domain contai... 208 7.0e-16 2
ZFIN|ZDB-GENE-070718-6 - symbol:herc2 "hect domain and RL... 223 2.1e-15 2
TAIR|locus:2205794 - symbol:AT1G27060 species:3702 "Arabi... 160 3.6e-14 2
ZFIN|ZDB-GENE-090311-7 - symbol:si:ch211-281g13.5 "si:ch2... 180 4.0e-14 2
UNIPROTKB|Q9UII4 - symbol:HERC5 "E3 ISG15--protein ligase... 216 4.4e-14 1
UNIPROTKB|Q8IVU3 - symbol:HERC6 "Probable E3 ubiquitin-pr... 168 5.0e-14 2
UNIPROTKB|F1NBC5 - symbol:HERC3 "Uncharacterized protein"... 169 5.9e-14 2
UNIPROTKB|P18754 - symbol:RCC1 "Regulator of chromosome c... 208 6.2e-14 1
UNIPROTKB|F1NCH3 - symbol:HERC4 "Uncharacterized protein"... 216 6.9e-14 2
RGD|1306366 - symbol:Herc1 "HECT and RLD domain containin... 219 9.5e-14 2
UNIPROTKB|E1C4H7 - symbol:HERC1 "Uncharacterized protein"... 220 1.3e-13 2
RGD|1310971 - symbol:Herc4 "HECT and RLD domain containin... 213 1.5e-13 2
UNIPROTKB|F1MNS0 - symbol:HERC1 "Uncharacterized protein"... 220 1.7e-13 2
UNIPROTKB|F1S098 - symbol:HERC1 "Uncharacterized protein"... 220 1.7e-13 2
UNIPROTKB|Q15751 - symbol:HERC1 "Probable E3 ubiquitin-pr... 221 1.7e-13 2
UNIPROTKB|E2QYQ5 - symbol:HERC1 "Uncharacterized protein"... 209 1.7e-13 2
UNIPROTKB|E1BRZ2 - symbol:NEK8 "Uncharacterized protein" ... 207 2.3e-13 1
ZFIN|ZDB-GENE-070615-14 - symbol:zgc:163136 "zgc:163136" ... 194 2.7e-13 2
MGI|MGI:1914595 - symbol:Herc4 "hect domain and RLD 4" sp... 210 3.3e-13 2
UNIPROTKB|E1C514 - symbol:HERC3 "Uncharacterized protein"... 169 3.4e-13 2
TAIR|locus:2009739 - symbol:AT1G65920 species:3702 "Arabi... 208 3.7e-13 2
TAIR|locus:504956339 - symbol:RUG1 "AT5G08710" species:37... 201 4.1e-13 1
UNIPROTKB|E1BAV2 - symbol:HERC4 "Uncharacterized protein"... 208 4.3e-13 2
TAIR|locus:505006603 - symbol:AT5G12350 "AT5G12350" speci... 207 4.5e-13 1
TAIR|locus:2076889 - symbol:AT3G02510 "AT3G02510" species... 170 4.6e-13 2
UNIPROTKB|Q74AS9 - symbol:GSU2272 "ATS1 domain repeat lip... 198 7.3e-13 1
TIGR_CMR|GSU_2272 - symbol:GSU_2272 "lipoprotein, putativ... 198 7.3e-13 1
UNIPROTKB|I3LT85 - symbol:RCC1 "Uncharacterized protein" ... 198 8.2e-13 1
UNIPROTKB|E2RFW5 - symbol:HERC4 "Uncharacterized protein"... 209 8.4e-13 2
UNIPROTKB|E2RFV1 - symbol:HERC4 "Uncharacterized protein"... 209 8.6e-13 2
UNIPROTKB|Q5GLZ8 - symbol:HERC4 "Probable E3 ubiquitin-pr... 207 8.9e-13 2
RGD|1307803 - symbol:Herc3 "HECT and RLD domain containin... 162 1.3e-12 2
UNIPROTKB|Q74DR4 - symbol:GSU1251 "ATS1 domain repeat pro... 206 1.3e-12 1
TIGR_CMR|GSU_1251 - symbol:GSU_1251 "BNR repeat domain pr... 206 1.3e-12 1
UNIPROTKB|A7Z018 - symbol:RCC1 "Uncharacterized protein" ... 195 1.8e-12 1
UNIPROTKB|E2RMB0 - symbol:HERC3 "Uncharacterized protein"... 163 2.4e-12 2
TAIR|locus:2099986 - symbol:AT3G55580 species:3702 "Arabi... 194 3.3e-12 1
ZFIN|ZDB-GENE-090311-16 - symbol:si:ch211-281g13.4 "si:ch... 198 3.9e-12 1
UNIPROTKB|F1RW66 - symbol:HERC3 "Uncharacterized protein"... 162 3.9e-12 2
TAIR|locus:2092190 - symbol:AT3G26100 species:3702 "Arabi... 194 4.0e-12 1
UNIPROTKB|Q15034 - symbol:HERC3 "Probable E3 ubiquitin-pr... 159 5.0e-12 2
UNIPROTKB|A2VDP7 - symbol:HERC3 "HERC3 protein" species:9... 158 5.0e-12 2
ZFIN|ZDB-GENE-040426-2213 - symbol:rcc2 "regulator of chr... 191 7.4e-12 1
UNIPROTKB|E1B827 - symbol:NEK8 "Uncharacterized protein" ... 190 1.8e-11 1
UNIPROTKB|P23800 - symbol:RCC1 "Regulator of chromosome c... 186 1.8e-11 1
TAIR|locus:2035423 - symbol:AT1G19880 species:3702 "Arabi... 188 1.9e-11 1
SGD|S000003065 - symbol:SRM1 "Nucleotide exchange factor ... 165 1.9e-11 2
TAIR|locus:2086253 - symbol:AT3G23270 "AT3G23270" species... 190 3.1e-11 1
UNIPROTKB|F1NUG6 - symbol:Gga.50841 "Uncharacterized prot... 142 3.2e-11 3
UNIPROTKB|Q92834 - symbol:RPGR "X-linked retinitis pigmen... 159 4.1e-11 3
ZFIN|ZDB-GENE-090311-56 - symbol:si:ch73-190m4.1 "si:ch73... 188 4.9e-11 1
ZFIN|ZDB-GENE-081015-2 - symbol:rpgrb "retinitis pigmento... 173 6.1e-11 3
UNIPROTKB|F1PB99 - symbol:HERC5 "Uncharacterized protein"... 187 6.5e-11 1
RGD|1592835 - symbol:Rcc1 "regulator of chromosome conden... 181 6.6e-11 1
UNIPROTKB|E1BVG2 - symbol:RCBTB1 "Uncharacterized protein... 169 7.4e-11 2
UNIPROTKB|E2QZC2 - symbol:NEK8 "Uncharacterized protein" ... 184 8.1e-11 1
UNIPROTKB|F1RNC5 - symbol:NEK8 "Uncharacterized protein" ... 183 1.0e-10 1
MGI|MGI:1913989 - symbol:Rcc1 "regulator of chromosome co... 179 1.1e-10 1
DICTYBASE|DDB_G0269934 - symbol:DDB_G0269934 "Ras GTPase ... 187 1.5e-10 1
UNIPROTKB|Q86SG6 - symbol:NEK8 "Serine/threonine-protein ... 181 1.7e-10 1
UNIPROTKB|F1N7C1 - symbol:HERC6 "Uncharacterized protein"... 180 3.7e-10 1
DICTYBASE|DDB_G0282633 - symbol:DDB_G0282633 "putative gu... 178 5.4e-10 1
DICTYBASE|DDB_G0278255 - symbol:DDB_G0278255 "regulator o... 174 6.0e-10 1
RGD|1561739 - symbol:Herc6 "HECT and RLD domain containin... 178 6.3e-10 1
TAIR|locus:2079147 - symbol:AT3G47660 "AT3G47660" species... 174 7.2e-10 2
TAIR|locus:2159295 - symbol:RUG3 "RCC1/UVR8/GEF-like 3" s... 172 7.5e-10 1
MGI|MGI:1919784 - symbol:Rcc2 "regulator of chromosome co... 172 1.0e-09 1
UNIPROTKB|Q9P258 - symbol:RCC2 "Protein RCC2" species:960... 172 1.0e-09 1
UNIPROTKB|F1LPM8 - symbol:Herc6 "Protein Herc6" species:1... 176 1.0e-09 1
POMBASE|SPBC557.03c - symbol:pim1 "Ran GDP/GTP exchange f... 171 1.4e-09 1
TAIR|locus:2165770 - symbol:AT5G42140 "AT5G42140" species... 175 1.4e-09 1
MGI|MGI:1917200 - symbol:Rcbtb2 "regulator of chromosome ... 163 1.5e-09 2
MGI|MGI:2444156 - symbol:Rccd1 "RCC1 domain containing 1"... 125 2.0e-09 2
ZFIN|ZDB-GENE-070912-423 - symbol:rpgra "retinitis pigmen... 176 2.6e-09 2
MGI|MGI:1890646 - symbol:Nek8 "NIMA (never in mitosis gen... 170 2.7e-09 1
UNIPROTKB|J9NWD8 - symbol:HERC1 "Uncharacterized protein"... 193 2.8e-09 2
ZFIN|ZDB-GENE-080929-1 - symbol:als2b "amyotrophic latera... 123 2.8e-09 2
RGD|1308467 - symbol:Rcbtb1 "regulator of chromosome cond... 168 2.9e-09 1
ZFIN|ZDB-GENE-090313-139 - symbol:herc3 "hect domain and ... 170 3.4e-09 2
MGI|MGI:1918580 - symbol:Rcbtb1 "regulator of chromosome ... 167 3.7e-09 1
UNIPROTKB|G3V2I3 - symbol:RCCD1 "RCC1 domain-containing p... 119 4.5e-09 2
UNIPROTKB|A6NED2 - symbol:RCCD1 "RCC1 domain-containing p... 119 4.6e-09 2
UNIPROTKB|I3LCV3 - symbol:RCBTB1 "Uncharacterized protein... 166 5.3e-09 1
MGI|MGI:1914388 - symbol:Herc6 "hect domain and RLD 6" sp... 169 5.8e-09 1
WARNING: Descriptions of 82 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2144291 [details] [associations]
symbol:AT5G11580 "AT5G11580" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 HSSP:P18754 EMBL:AY058861 EMBL:AY079040
IPI:IPI00537184 RefSeq:NP_568250.1 UniGene:At.5137 UniGene:At.75215
ProteinModelPortal:Q93Z10 SMR:Q93Z10 PRIDE:Q93Z10
EnsemblPlants:AT5G11580.1 GeneID:831030 KEGG:ath:AT5G11580
TAIR:At5g11580 InParanoid:Q93Z10 OMA:WTFGLGD PhylomeDB:Q93Z10
ProtClustDB:CLSN2689608 Genevestigator:Q93Z10 Uniprot:Q93Z10
Length = 553
Score = 1041 (371.5 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 204/359 (56%), Positives = 247/359 (68%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF G NSL PC+I+ S +DS + +K+C+VKAG MMSLAIDN G
Sbjct: 103 GQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGG 162
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
LWMWGN P DS + S S P P+ DFHG TV+KVACG EHVVALV G+ +K
Sbjct: 163 LWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDN 222
Query: 153 --DL-VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
D+ V YSWG N++GQLGLGD ESR RP+ +ETFNQ S VY++ CG+ HTALLT+RK
Sbjct: 223 SYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRK 282
Query: 210 R-PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
P S+CWTFG GENGQLGH + +S+ +PE V +LP++ YLVSVDCGLFHTSVVSS
Sbjct: 283 ETPKG--PSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSS 340
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G VWSWGME+GLGLCP+ + T EAGD P ISG +F+DPVQV+CGAAHTVL
Sbjct: 341 EGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSS---RFRDPVQVSCGAAHTVL 397
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTG--GLDDEIK 385
V D GYKLWSWGRGR+GVLGTG D + P +V WP + K++ + G +EIK
Sbjct: 398 VVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWPNELKPEKEEVPDDGKSASTEEIK 456
Score = 348 (127.6 bits), Expect = 8.1e-140, Sum P(2) = 8.1e-140
Identities = 68/111 (61%), Positives = 88/111 (79%)
Query: 390 EGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFD 449
E E D+ S++ EE+K L+SKL VMERYASILHGSIFGKPF E+DIP SL+ G+FD
Sbjct: 439 EKEEVPDDGKSASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIPYSLRVSGYFD 498
Query: 450 ITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSS 500
+ KEW MLESAD+S+L+RL+ FY +M+ VKDK+++RRIQEI+ +CL SS
Sbjct: 499 MGKEWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMKDCLQSS 549
Score = 162 (62.1 bits), Expect = 2.3e-43, Sum P(2) = 2.3e-43
Identities = 99/357 (27%), Positives = 143/357 (40%)
Query: 23 CYTSLNCCMDGQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGG 81
C S M G+LG S+ LVP ++E F P+ E D I+I V AG
Sbjct: 36 CVYSWGRGMFGRLGTGKESDELVPVLVE-F-----PNQAEGDR-------IRIVGVAAGA 82
Query: 82 MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVA------C 134
SLA+ + G++W WG + + GF +S P + + F T
Sbjct: 83 YHSLAVSDDGSVWCWGY----NIYGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREV 138
Query: 135 GSEHVVALVSAGETYK-GEDLV--CYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPW 190
GS+ V V AG D V + WG N Q D R S I
Sbjct: 139 GSDLKVCTVKAGSMMSLAIDNVGGLWMWG-NVPPQDSEPDPRLSFTSIPIPFPILDFHGR 197
Query: 191 AVYEVTCGSFHTALLT-----HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V +V CG H L H+ D+ S+ +++G +GQLG G +S P+ V+
Sbjct: 198 TVLKVACGDEHVVALVGPGDIHKDNSYDV--SVLYSWGNNHHGQLGLGDGESRARPQTVE 255
Query: 246 ELPQYVYLVSVD--CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN-EAGDAISPIL 302
Q L D CG HT++++ + KG +C N + G +
Sbjct: 256 TFNQKSGLTVYDIACGAHHTALLTYRKET-----PKGPSICWTFGFGENGQLGHRSNK-- 308
Query: 303 ISGNGPHG----PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
S + P P+ V V CG HT +V+ +GY +WSWG R LG ++F
Sbjct: 309 -SSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSEGY-VWSWGMERG--LGLCPDVNF 361
Score = 120 (47.3 bits), Expect = 6.0e-39, Sum P(2) = 6.0e-39
Identities = 41/130 (31%), Positives = 63/130 (48%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-GNGPHGP 311
++S+ G HT ++ G V+SWG +G+ L + D + P+L+ N G
Sbjct: 18 IISLAAGEAHTIALTGDGCVYSWG--RGMF----GRLGTGKESDELVPVLVEFPNQAEGD 71
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG-TGKTIDFFAPAIVLWPPLTE-E 369
+ + V VA GA H++ V+DDG +W WG G LG G+ + AP ++ L E E
Sbjct: 72 RIRI-VGVAAGAYHSLAVSDDG-SVWCWGYNIYGQLGFDGE--NSLAPCLI--KNLFERE 125
Query: 370 FKQDELNTGG 379
LN G
Sbjct: 126 TSSSSLNDSG 135
Score = 84 (34.6 bits), Expect = 3.6e-35, Sum P(2) = 3.6e-35
Identities = 39/136 (28%), Positives = 59/136 (43%)
Query: 60 LEDDSKT---NHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSST-EGGFSLVSS 115
+ED S T + KI S+ AG ++A+ G ++ WG T + LV
Sbjct: 1 MEDKSPTLLISEDLSRKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPV 60
Query: 116 FTPSPVWDFHGHTV--VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P G + V VA G+ H +A+ G + C WG N GQLG D E
Sbjct: 61 LVEFPN-QAEGDRIRIVGVAAGAYHSLAVSDDGSVW------C--WGYNIYGQLGF-DGE 110
Query: 174 SRLRPKIIET-FNQDS 188
+ L P +I+ F +++
Sbjct: 111 NSLAPCLIKNLFERET 126
>TAIR|locus:2163986 [details] [associations]
symbol:UVR8 "UVB-RESISTANCE 8" species:3702 "Arabidopsis
thaliana" [GO:0005737 "cytoplasm" evidence=ISM] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=ISS]
[GO:0009411 "response to UV" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0010224 "response to UV-B"
evidence=IEP;IGI] [GO:0000785 "chromatin" evidence=IDA] [GO:0009649
"entrainment of circadian clock" evidence=IMP] [GO:0006007 "glucose
catabolic process" evidence=RCA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005829 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009649 GO:GO:0000785 EMBL:AB007646
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0010224 eggNOG:COG5184 UniGene:At.49214
EMBL:AF130441 EMBL:AY125497 EMBL:BT000600 IPI:IPI00521473
PIR:T50662 RefSeq:NP_201191.1 PDB:4D9S PDB:4DNU PDB:4DNV PDB:4DNW
PDBsum:4D9S PDBsum:4DNU PDBsum:4DNV PDBsum:4DNW
ProteinModelPortal:Q9FN03 SMR:Q9FN03 DIP:DIP-59667N STRING:Q9FN03
PRIDE:Q9FN03 EnsemblPlants:AT5G63860.1 GeneID:836506
KEGG:ath:AT5G63860 TAIR:At5g63860 HOGENOM:HOG000240817
InParanoid:Q9FN03 OMA:GTLWCWG PhylomeDB:Q9FN03
ProtClustDB:CLSN2686209 Genevestigator:Q9FN03 Uniprot:Q9FN03
Length = 440
Score = 219 (82.2 bits), Expect = 4.1e-15, P = 4.1e-15
Identities = 69/208 (33%), Positives = 95/208 (45%)
Query: 73 KICSVKAGGMMSLAIDNAGA-LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+I SV G ++A +G ++ WG D G + FTP P+ HG + +
Sbjct: 68 QIVSVTCGADHTVAYSQSGMEVYSWG---WGDFGRLGHGNSSDLFTPLPIKALHGIRIKQ 124
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H +A+ GE SWG N NGQLGLGD E L P+ I+ F
Sbjct: 125 IACGDSHCLAVTMEGEVQ--------SWGRNQNGQLGLGDTEDSLVPQKIQAFEGIR--- 173
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ V G+ HTA +T D+ W G G G LG G LVPE+V
Sbjct: 174 IKMVAAGAEHTAAVTE---DGDLYG---W--GWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ V CG HT VS +G ++++G K
Sbjct: 226 -MSMVACGWRHTISVSYSGALYTYGWSK 252
Score = 198 (74.8 bits), Expect = 9.3e-13, P = 9.3e-13
Identities = 61/172 (35%), Positives = 89/172 (51%)
Query: 189 PWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P V ++ G+ H+ ALL+ D++ S W G GE+GQLGHG + P Q+ L
Sbjct: 14 PRKVLIISAGASHSVALLS-----GDIVCS--W--GRGEDGQLGHGDAEDRPSPTQLSAL 64
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ +VSV CG HT S +G +V+SWG G L + D +P+ I
Sbjct: 65 DGH-QIVSVTCGADHTVAYSQSGMEVYSWGWGD-FG-----RLGHGNSSDLFTPLPIKAL 117
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
HG + + Q+ACG +H + VT +G ++ SWGR ++G LG G T D P
Sbjct: 118 --HGIRIK---QIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGDTEDSLVP 163
Score = 186 (70.5 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 46/142 (32%), Positives = 75/142 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G + GQLGHG + L+P +++ L ++ + G HT ++S G ++ WG K
Sbjct: 246 YTYGWSKYGQLGHGDLEDHLIPHKLEALSNS-FISQISGGWRHTMALTSDGKLYGWGWNK 304
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G + N D SP+ + P Q VQV+CG HT+ VT+ +++W
Sbjct: 305 -FG---QVGVGNNL--DQCSPVQV-----RFPDDQKVVQVSCGWRHTLAVTERN-NVFAW 352
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
GRG +G LG G+++D P I+
Sbjct: 353 GRGTNGQLGIGESVDRNFPKII 374
Score = 171 (65.3 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 46/139 (33%), Positives = 66/139 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + P +K L + + + CG H V+ G+V SWG +
Sbjct: 90 YSWGWGDFGRLGHGNSSDLFTPLPIKAL-HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ 148
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
N L + D++ P I G + + VA GA HT VT+DG L+ W
Sbjct: 149 ------NGQLGLGDTEDSLVPQKIQAF--EGIRIK---MVAAGAEHTAAVTEDG-DLYGW 196
Query: 340 GRGRSGVLGTGKTIDFFAP 358
G GR G LG G D P
Sbjct: 197 GWGRYGNLGLGDRTDRLVP 215
Score = 167 (63.8 bits), Expect = 2.6e-09, P = 2.6e-09
Identities = 71/244 (29%), Positives = 102/244 (41%)
Query: 72 IKICSVKAGGMMSLAIDNAGAL--WMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHG 126
I+I V AG + A+ G L W WG N L D + LV P V G
Sbjct: 172 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDR----LV----PERVTSTGG 223
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+ VACG H +++ +Y G L Y W + GQLG GD E L P +E +
Sbjct: 224 EKMSMVACGWRHTISV-----SYSGA-LYTYGW--SKYGQLGHGDLEDHLIPHKLEALSN 275
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ +++ G HT LT + + +G + GQ+G G P QV+
Sbjct: 276 SF---ISQISGGWRHTMALTS--------DGKLYGWGWNKFGQVGVGNNLDQCSPVQVR- 323
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG- 305
P +V V CG HT V+ +V++WG L S+ RN I + + G
Sbjct: 324 FPDDQKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFP-KIIEALSVDGA 382
Query: 306 NGPH 309
+G H
Sbjct: 383 SGQH 386
Score = 135 (52.6 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 42/121 (34%), Positives = 58/121 (47%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD-VWSWGMEKGLGLCPNASLTRNEAGDA 297
+ ++V P+ V ++S G H SV +GD V SWG +G + L +A D
Sbjct: 5 MAADEVTAPPRKVLIISA--GASH-SVALLSGDIVCSWG--RG----EDGQLGHGDAEDR 55
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
SP +S H V V CGA HTV + G +++SWG G G LG G + D F
Sbjct: 56 PSPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFT 110
Query: 358 P 358
P
Sbjct: 111 P 111
Score = 129 (50.5 bits), Expect = 4.7e-13, Sum P(2) = 4.7e-13
Identities = 43/143 (30%), Positives = 64/143 (44%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G G G LG G LVPE+V + V CG HT VS +G ++++G K
Sbjct: 196 WGWGRYGNLGLGDRTDRLVPERVTSTGGEK-MSMVACGWRHTISVSYSGALYTYGWSK-- 252
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
L + D + P + F Q++ G HT+ +T DG KL+ WG
Sbjct: 253 ----YGQLGHGDLEDHLIPHKLEALSN---SFIS--QISGGWRHTMALTSDG-KLYGWGW 302
Query: 342 GRSGVLGTGKTIDFFAPAIVLWP 364
+ G +G G +D +P V +P
Sbjct: 303 NKFGQVGVGNNLDQCSPVQVRFP 325
Score = 120 (47.3 bits), Expect = 1.7e-19, Sum P(2) = 1.7e-19
Identities = 37/156 (23%), Positives = 63/156 (40%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWGR---GEDGQLGHGDAEDRPSPTQLSALDGHQIV 70
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 71 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
+ ++ CG H +T + GLG+
Sbjct: 122 -IKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGD 156
>UNIPROTKB|E2RDC2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0032183 "SUMO binding" evidence=IEA]
[GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208 CTD:8924
KO:K10595 OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706
EMBL:AAEX03002160 EMBL:AAEX03002161 EMBL:AAEX03002162
RefSeq:XP_536160.2 ProteinModelPortal:E2RDC2
Ensembl:ENSCAFT00000015697 GeneID:479005 KEGG:cfa:479005
Uniprot:E2RDC2
Length = 4837
Score = 208 (78.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 62/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 4098
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 4099 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4147
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4148 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4199
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4200 -LGVVKVECGSQFSVALTKSGAVYTWG 4225
Score = 200 (75.5 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3107
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3108 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3158
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3206
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3207 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 195 (73.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 169 (64.5 bits), Expect = 7.5e-10, Sum P(2) = 7.5e-10
Identities = 65/208 (31%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3145 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3201
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3202 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3250
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ AG V++WG + G N + T N P L
Sbjct: 3251 VVEGL-RGKKIVHVAVGALHCLAVTDAGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3303
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3304 VQGL--EGQKI---TRVACGSSHSVAWT 3326
Score = 166 (63.5 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 46/137 (33%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4060 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4118
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H V VACG+ A T+ +TDD
Sbjct: 4119 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDVACGSGDAQTLCLTDDD 4167
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4168 -TVWSWGDGDYGKLGRG 4183
Score = 157 (60.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 61/210 (29%), Positives = 82/210 (39%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + V
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VKV CGS+ +AL G+ Y SWG +N +LG G E PK++E
Sbjct: 661 VKVRCGSQFSIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK- 711
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP- 248
V +V GS H LT E W G N Q H T PE LP
Sbjct: 712 --VIDVAAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPG 758
Query: 249 -QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++V + CG + SS + WS G+
Sbjct: 759 LDTKHIVGIACGPAQSFAWSSCSE-WSIGL 787
Score = 156 (60.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 575
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 576 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 624
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 625 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 152 (58.6 bits), Expect = 6.3e-18, Sum P(2) = 6.3e-18
Identities = 39/133 (29%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y +WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDAGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 152 (58.6 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 273
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 331
SWG + G L R + +P LI K QD V+V CG+ ++ +T
Sbjct: 629 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTK 675
Query: 332 DGYKLWSWGRGRSGVLGTG 350
DG +++SWG+G + LG G
Sbjct: 676 DG-QVYSWGKGDNQRLGHG 693
Score = 148 (57.2 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4013 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4071
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4072 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4117
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG + D P +V
Sbjct: 4118 WGKGRYGRLGHSDSEDQLKPKLV 4140
Score = 147 (56.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K N + I+ KA G+ S A +++WG L D GG PS
Sbjct: 2934 EEDEKGNSGSLIR---KKAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2986
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 2987 SETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---GEATNGRLGLGLSSGTVPIPR 3038
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3039 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 3088 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 144 (55.7 bits), Expect = 4.3e-17, Sum P(2) = 4.3e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3154 VIQVACGS 3161
Score = 144 (55.7 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4183 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 4239
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y +WG N+ GQLG G +
Sbjct: 4240 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNA 4291
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 4292 IQRPRLVAALQGKK---VNRVACGSAHT 4316
Score = 136 (52.9 bits), Expect = 9.4e-15, Sum P(2) = 9.4e-15
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4170 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4226
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4227 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4276
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 4277 GDNDEGQLGDGTTNAIQRPRLV 4298
Score = 136 (52.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3231 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDAG-Q 3278
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3279 VYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 125 (49.1 bits), Expect = 4.0e-15, Sum P(2) = 4.0e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3158 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3208
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3209 CQIECGAQFSLALT 3222
Score = 112 (44.5 bits), Expect = 9.0e-14, Sum P(2) = 9.0e-14
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 661
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 101 (40.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ +AG ++ WG+ D +G + + P+ V G + +V
Sbjct: 3259 KIVHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3315
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3316 ACGSSHSVA 3324
Score = 97 (39.2 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4279
Query: 280 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4280 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4317
Score = 94 (38.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4222 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4270
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4271 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4322
Score = 86 (35.3 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 28/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + + V+ G S+A+ G ++ WG D+ G +
Sbjct: 641 GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEH 697
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 698 VRYPKLLEGLQGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 82 (33.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3209
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3210 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 3259
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3260 -IVHVAVGALHCLAVT 3274
Score = 71 (30.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3990 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4046
Query: 375 LNTGG 379
+N+GG
Sbjct: 4047 VNSGG 4051
Score = 44 (20.5 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +G+ S +I F Q S W
Sbjct: 2657 YKWGSVTHQSVGIVKAFSANGKDVIVDFPQQSHW 2690
Score = 40 (19.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 300 PILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 341
PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3836 PIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3878
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2966 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Score = 38 (18.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S+VP
Sbjct: 3736 VTCLLDFRLNLTSNRSIVP 3754
>RGD|1307989 [details] [associations]
symbol:Herc2 "HECT and RLD domain containing E3 ubiquitin
protein ligase 2" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=ISO;IBA] [GO:0005634
"nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0005743 "mitochondrial inner membrane"
evidence=ISO] [GO:0006281 "DNA repair" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0007283
"spermatogenesis" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016567 "protein ubiquitination" evidence=ISO]
[GO:0020037 "heme binding" evidence=IEA] [GO:0031625 "ubiquitin
protein ligase binding" evidence=ISO] [GO:0032183 "SUMO binding"
evidence=ISO] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
GO:GO:0042787 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00476523 Ensembl:ENSRNOT00000019318
UCSC:RGD:1307989 ArrayExpress:F1M716 Uniprot:F1M716
Length = 3607
Score = 207 (77.9 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 61/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 2813 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 2869
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 2870 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 2918
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 2919 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 2970
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 2971 -LGVVKVECGSQFSVALTKSGAVYTWG 2996
Score = 200 (75.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 1859 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 1915
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 1916 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 1966
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 2014
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2015 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Score = 166 (63.5 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 1953 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 2009
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 2010 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 2058
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 2059 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 2111
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 2112 VQGL--EGQKI---TRVACGSSHSVAWT 2134
Score = 164 (62.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 2831 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 2889
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 2890 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 2938
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 2939 -TVWSWGDGDYGKLGRG 2954
Score = 149 (57.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2072
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 2073 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2121
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 2122 RVACGSSHSVAWT 2134
Score = 148 (57.2 bits), Expect = 6.2e-16, Sum P(2) = 6.2e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 2784 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2842
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 2843 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 2888
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG + D P +V
Sbjct: 2889 WGKGRYGRLGHSDSEDQLKPKLV 2911
Score = 144 (55.7 bits), Expect = 3.8e-17, Sum P(2) = 3.8e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 1856 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 1912
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 1913 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 1961
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 1962 VIQVACGS 1969
Score = 144 (55.7 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 2954 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 3010
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y +WG N+ GQLG G +
Sbjct: 3011 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNA 3062
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 3063 IQRPRLVAALQGKK---VNRVACGSAHT 3087
Score = 138 (53.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 1980 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2038
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 2039 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 2086
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 2087 VYAWGDNDHGQQGNGTTTVNRKPTLV 2112
Score = 136 (52.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 2941 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 2997
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 2998 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 3047
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 3048 GDNDEGQLGDGTTNAIQRPRLV 3069
Score = 136 (52.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 61/227 (26%), Positives = 104/227 (45%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K + + I+ K G+ S A +++WG L D GG PS
Sbjct: 1742 EEDDKGSTGSLIR---KKTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 1794
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 1795 SETLSALNVVQVAGGSKSLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPR 1846
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 1847 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 1895
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 1896 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 1941
Score = 125 (49.1 bits), Expect = 3.6e-15, Sum P(2) = 3.6e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 1909 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 1965
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 1966 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 2016
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 2017 CQIECGAQFSLALT 2030
Score = 98 (39.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 2067 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 2123
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 2124 ACGSSHSVA 2132
Score = 97 (39.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 2993 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 3050
Query: 280 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 3051 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 3088
Score = 94 (38.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 2993 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 3041
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 3042 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 3093
Score = 82 (33.9 bits), Expect = 1.0e-10, Sum P(2) = 1.0e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 1961 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 2017
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 2018 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 2067
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 2068 -IVHVAVGALHCLAVT 2082
Score = 71 (30.1 bits), Expect = 8.6e-10, Sum P(2) = 8.6e-10
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 2761 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 2817
Query: 375 LNTGG 379
+N+GG
Sbjct: 2818 VNSGG 2822
Score = 47 (21.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +GL S II F Q S W
Sbjct: 1465 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 1498
Score = 43 (20.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 321
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 2577 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 2629
Query: 322 GAA-HTVLVTDDGYKLWSWGR 341
T+ + +K W+W R
Sbjct: 2630 DLELDTLPCCAETHK-WAWFR 2649
Score = 38 (18.4 bits), Expect = 8.1e-11, Sum P(2) = 8.1e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S+VP
Sbjct: 2507 VTCLLDFRLNLTSNRSIVP 2525
>UNIPROTKB|F1M560 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872
GO:GO:0008270 GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.10.120.10
SUPFAM:SSF55856 InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 InterPro:IPR006624
SMART:SM00706 IPI:IPI00779702 Ensembl:ENSRNOT00000055965
ArrayExpress:F1M560 Uniprot:F1M560
Length = 3643
Score = 207 (77.9 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 61/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 2849 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 2905
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 2906 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 2954
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 2955 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 3006
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 3007 -LGVVKVECGSQFSVALTKSGAVYTWG 3032
Score = 200 (75.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 1859 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 1915
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 1916 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 1966
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 1967 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 2014
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2015 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2060
Score = 166 (63.5 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 1953 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 2009
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 2010 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 2058
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 2059 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 2111
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 2112 VQGL--EGQKI---TRVACGSSHSVAWT 2134
Score = 164 (62.8 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 2867 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 2925
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 2926 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 2974
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 2975 -TVWSWGDGDYGKLGRG 2990
Score = 149 (57.5 bits), Expect = 1.2e-17, Sum P(2) = 1.2e-17
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2072
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 2073 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2121
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 2122 RVACGSSHSVAWT 2134
Score = 148 (57.2 bits), Expect = 6.3e-16, Sum P(2) = 6.3e-16
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 2820 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 2878
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 2879 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 2924
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG + D P +V
Sbjct: 2925 WGKGRYGRLGHSDSEDQLKPKLV 2947
Score = 144 (55.7 bits), Expect = 3.9e-17, Sum P(2) = 3.9e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 1856 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 1912
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 1913 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 1961
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 1962 VIQVACGS 1969
Score = 144 (55.7 bits), Expect = 0.00047, Sum P(2) = 0.00047
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 2990 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 3046
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y +WG N+ GQLG G +
Sbjct: 3047 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNA 3098
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 3099 IQRPRLVAALQGKK---VNRVACGSAHT 3123
Score = 138 (53.6 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 1980 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 2038
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 2039 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 2086
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 2087 VYAWGDNDHGQQGNGTTTVNRKPTLV 2112
Score = 136 (52.9 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 2977 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 3033
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 3034 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 3083
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 3084 GDNDEGQLGDGTTNAIQRPRLV 3105
Score = 136 (52.9 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 61/227 (26%), Positives = 104/227 (45%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K + + I+ K G+ S A +++WG L D GG PS
Sbjct: 1742 EEDDKGSTGSLIR---KKTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 1794
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 1795 SETLSALNVVQVAGGSKSLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPR 1846
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 1847 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 1895
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 1896 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 1941
Score = 125 (49.1 bits), Expect = 3.7e-15, Sum P(2) = 3.7e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 1909 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 1965
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 1966 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 2016
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 2017 CQIECGAQFSLALT 2030
Score = 98 (39.6 bits), Expect = 2.3e-12, Sum P(2) = 2.3e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 2067 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 2123
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 2124 ACGSSHSVA 2132
Score = 97 (39.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 3029 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 3086
Query: 280 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 3087 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 3124
Score = 94 (38.1 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 3029 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 3077
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 3078 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 3129
Score = 82 (33.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 1961 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 2017
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 2018 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 2067
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 2068 -IVHVAVGALHCLAVT 2082
Score = 71 (30.1 bits), Expect = 8.7e-10, Sum P(2) = 8.7e-10
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 2797 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 2853
Query: 375 LNTGG 379
+N+GG
Sbjct: 2854 VNSGG 2858
Score = 47 (21.6 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +GL S II F Q S W
Sbjct: 1465 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 1498
Score = 43 (20.2 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 321
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 2613 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 2665
Query: 322 GAA-HTVLVTDDGYKLWSWGR 341
T+ + +K W+W R
Sbjct: 2666 DLELDTLPCCAETHK-WAWFR 2685
Score = 38 (18.4 bits), Expect = 8.2e-11, Sum P(2) = 8.2e-11
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S+VP
Sbjct: 2543 VTCLLDFRLNLTSNRSIVP 2561
>UNIPROTKB|G3MX12 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0020037 "heme binding" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0046872 GO:GO:0008270
GO:GO:0020037 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:DAAA02003804 EMBL:DAAA02003805 Ensembl:ENSBTAT00000063010
Uniprot:G3MX12
Length = 4757
Score = 209 (78.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 62/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 3962 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGTEVVD 4018
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 4019 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4067
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4068 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4119
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4120 -LGVVKVECGSQFSVALTKSGAVYTWG 4145
Score = 200 (75.5 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 2971 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3027
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3028 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3078
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3079 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3126
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3127 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3172
Score = 195 (73.7 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 392 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 443
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 444 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 495
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 496 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 541
Score = 169 (64.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 65/208 (31%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3065 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3121
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3122 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3170
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ AG V++WG + G N + T N P L
Sbjct: 3171 VVEGL-RGKKIVHVAVGALHCLAVTDAGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3223
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3224 VQGL--EGQKI---TRVACGSSHSVAWT 3246
Score = 163 (62.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + +V V G H++ V++AGD+++W
Sbjct: 3980 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHSACVTAAGDLYTW 4038
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H V VACG+ A T+ +TDD
Sbjct: 4039 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDVACGSGDAQTLCLTDDD 4087
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4088 -TVWSWGDGDYGKLGRG 4103
Score = 158 (60.7 bits), Expect = 6.5e-06, Sum P(2) = 6.5e-06
Identities = 62/210 (29%), Positives = 82/210 (39%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + V
Sbjct: 514 LKVIDVACGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDV 570
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VKV CGS+ VAL G+ Y SWG +N +LG G E PK++E
Sbjct: 571 VKVRCGSQFSVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK- 621
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP- 248
V +V GS H LT E W G N Q H T PE LP
Sbjct: 622 --VIDVAAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPG 668
Query: 249 -QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++V + CG + SS + WS G+
Sbjct: 669 LDTKHIVGIACGPAQSFAWSSCSE-WSIGL 697
Score = 157 (60.3 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 59/208 (28%), Positives = 91/208 (43%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G ++++ P E P + G T
Sbjct: 3878 YGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TA 3925
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ + G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+
Sbjct: 3926 DGKLYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVY 3984
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWG + + L P +I + + V VA G AH+ VT G
Sbjct: 3985 SWGEAE------DGKLGHGNRSPCDRPRVIESL-----RGTEVVDVAAGGAHSACVTAAG 4033
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG + D P +V
Sbjct: 4034 -DLYTWGKGRYGRLGHSDSEDQLKPKLV 4060
Score = 156 (60.0 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 428 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 485
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 486 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 534
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 535 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 562
Score = 153 (58.9 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 273
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 480 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 538
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 331
SWG + G L R + +P LI K QD V+V CG+ +V +T
Sbjct: 539 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTK 585
Query: 332 DGYKLWSWGRGRSGVLGTG 350
DG +++SWG+G + LG G
Sbjct: 586 DG-QVYSWGKGDNQRLGHG 603
Score = 152 (58.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 39/133 (29%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3128 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3184
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y +WG N++GQ G G +P +++ +
Sbjct: 3185 VGALHCLAVTDAGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3233
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3234 RVACGSSHSVAWT 3246
Score = 148 (57.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K N + I+ KA G+ S A +++WG L D GG PS
Sbjct: 2854 EEDEKGNSGSLIR---KKAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2906
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 2907 SETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---GEATNGRLGLGISSGTVPIPR 2958
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 2959 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3007
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 3008 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3053
Score = 144 (55.7 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2968 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3024
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3025 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3073
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3074 VIQVACGS 3081
Score = 136 (52.9 bits), Expect = 6.7e-14, Sum P(2) = 6.7e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3092 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3150
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3151 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDAG-Q 3198
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3199 VYAWGDNDHGQQGNGTTTVNRKPTLV 3224
Score = 135 (52.6 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 52/177 (29%), Positives = 82/177 (46%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D +SWG + G+LG G + P I++ + V +V CGS + LT
Sbjct: 4085 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGVVKVECGSQFSVALTK---- 4137
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+T+G G+ +LGHG+ P QV+ L Q ++++ G H S G+
Sbjct: 4138 ----SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCSEDGE 4192
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4193 VYTWG-DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4237
Score = 132 (51.5 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4090 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4146
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V ++DG ++++W
Sbjct: 4147 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCSEDG-EVYTW 4196
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 4197 GDNDEGQLGDGTTNAIQRPRLV 4218
Score = 125 (49.1 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3021 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3077
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3078 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3128
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3129 CQIECGAQFSLALT 3142
Score = 113 (44.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 464 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 520
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 521 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 571
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 572 KVRCGSQFSVALT 584
Score = 101 (40.6 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ +AG ++ WG+ D +G + + P+ V G + +V
Sbjct: 3179 KIVHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3235
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3236 ACGSSHSVA 3244
Score = 90 (36.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H + +
Sbjct: 4142 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCSE--------D 4190
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4191 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4242
Score = 85 (35.0 bits), Expect = 1.1e-14, Sum P(2) = 1.1e-14
Identities = 28/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + + V+ G S+A+ G ++ WG D+ G +
Sbjct: 551 GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK---GDNQRLGHGTEEH 607
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 608 VRYPKLLEGLQGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 651
Score = 82 (33.9 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3073 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3129
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3130 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 3179
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3180 -IVHVAVGALHCLAVT 3194
Score = 44 (20.5 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 24/81 (29%), Positives = 36/81 (44%)
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 321
T +S +G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3726 TRALSFSGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3778
Query: 322 GAA-HTVLVTDDGYKLWSWGR 341
T+ + +K W+W R
Sbjct: 3779 DLELDTLPCCAETHK-WAWFR 3798
Score = 43 (20.2 bits), Expect = 5.8e-10, Sum P(3) = 5.8e-10
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +G+ S +I F Q S W
Sbjct: 2577 YKWGSVTHQSVGVVKAFSANGKDVIVDFPQQSHW 2610
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2886 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2935
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S++P
Sbjct: 3656 VTCLLDFRLNLASNRSIIP 3674
>UNIPROTKB|E1B782 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0032183 "SUMO binding" evidence=IEA] [GO:0031625
"ubiquitin protein ligase binding" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0020037 "heme
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005743
GO:GO:0046872 GO:GO:0008270 GO:GO:0006281 GO:GO:0007283
GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 GeneTree:ENSGT00700000104208
OMA:QLAFTRD InterPro:IPR006624 SMART:SM00706 EMBL:DAAA02003804
EMBL:DAAA02003805 IPI:IPI00713038 Ensembl:ENSBTAT00000018496
Uniprot:E1B782
Length = 4847
Score = 209 (78.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 62/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 4052 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGTEVVD 4108
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 4109 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4157
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4158 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4209
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4210 -LGVVKVECGSQFSVALTKSGAVYTWG 4235
Score = 200 (75.5 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3061 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3117
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3118 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3168
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3169 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3216
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3217 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3262
Score = 195 (73.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 169 (64.5 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 65/208 (31%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3155 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3211
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3212 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3260
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ AG V++WG + G N + T N P L
Sbjct: 3261 VVEGL-RGKKIVHVAVGALHCLAVTDAGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3313
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3314 VQGL--EGQKI---TRVACGSSHSVAWT 3336
Score = 163 (62.4 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 46/137 (33%), Positives = 71/137 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + +V V G H++ V++AGD+++W
Sbjct: 4070 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHSACVTAAGDLYTW 4128
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H V VACG+ A T+ +TDD
Sbjct: 4129 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDVACGSGDAQTLCLTDDD 4177
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4178 -TVWSWGDGDYGKLGRG 4193
Score = 158 (60.7 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 62/210 (29%), Positives = 82/210 (39%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + V
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VKV CGS+ VAL G+ Y SWG +N +LG G E PK++E
Sbjct: 661 VKVRCGSQFSVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK- 711
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP- 248
V +V GS H LT E W G N Q H T PE LP
Sbjct: 712 --VIDVAAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPG 758
Query: 249 -QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++V + CG + SS + WS G+
Sbjct: 759 LDTKHIVGIACGPAQSFAWSSCSE-WSIGL 787
Score = 157 (60.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 59/208 (28%), Positives = 91/208 (43%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G ++++ P E P + G T
Sbjct: 3968 YGWGHNHRGQLG-GIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TA 4015
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ + G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+
Sbjct: 4016 DGKLYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVY 4074
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWG + + L P +I + + V VA G AH+ VT G
Sbjct: 4075 SWGEAE------DGKLGHGNRSPCDRPRVIESL-----RGTEVVDVAAGGAHSACVTAAG 4123
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG + D P +V
Sbjct: 4124 -DLYTWGKGRYGRLGHSDSEDQLKPKLV 4150
Score = 156 (60.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 575
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 576 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 624
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 625 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 153 (58.9 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 47/139 (33%), Positives = 71/139 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 273
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 331
SWG + G L R + +P LI K QD V+V CG+ +V +T
Sbjct: 629 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTK 675
Query: 332 DGYKLWSWGRGRSGVLGTG 350
DG +++SWG+G + LG G
Sbjct: 676 DG-QVYSWGKGDNQRLGHG 693
Score = 152 (58.6 bits), Expect = 1.3e-17, Sum P(2) = 1.3e-17
Identities = 39/133 (29%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3218 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3274
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y +WG N++GQ G G +P +++ +
Sbjct: 3275 VGALHCLAVTDAGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3323
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3324 RVACGSSHSVAWT 3336
Score = 148 (57.2 bits), Expect = 7.8e-05, Sum P(2) = 7.8e-05
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K N + I+ KA G+ S A +++WG L D GG PS
Sbjct: 2944 EEDEKGNSGSLIR---KKAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2996
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 2997 SETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---GEATNGRLGLGISSGTVPIPR 3048
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3049 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3097
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 3098 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3143
Score = 144 (55.7 bits), Expect = 9.1e-17, Sum P(2) = 9.1e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3058 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3114
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3115 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3163
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3164 VIQVACGS 3171
Score = 136 (52.9 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3182 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3240
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3241 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDAG-Q 3288
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3289 VYAWGDNDHGQQGNGTTTVNRKPTLV 3314
Score = 135 (52.6 bits), Expect = 2.7e-09, Sum P(2) = 2.7e-09
Identities = 52/177 (29%), Positives = 82/177 (46%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D +SWG + G+LG G + P I++ + V +V CGS + LT
Sbjct: 4175 DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLGVVKVECGSQFSVALTK---- 4227
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+T+G G+ +LGHG+ P QV+ L Q ++++ G H S G+
Sbjct: 4228 ----SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCSEDGE 4282
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4283 VYTWG-DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4327
Score = 132 (51.5 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 40/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4180 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4236
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V ++DG ++++W
Sbjct: 4237 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCSEDG-EVYTW 4286
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 4287 GDNDEGQLGDGTTNAIQRPRLV 4308
Score = 125 (49.1 bits), Expect = 8.6e-15, Sum P(2) = 8.6e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3111 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3167
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3168 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3218
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3219 CQIECGAQFSLALT 3232
Score = 113 (44.8 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 661
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 662 KVRCGSQFSVALT 674
Score = 101 (40.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ +AG ++ WG+ D +G + + P+ V G + +V
Sbjct: 3269 KIVHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3325
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3326 ACGSSHSVA 3334
Score = 90 (36.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 31/113 (27%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H + +
Sbjct: 4232 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCSE--------D 4280
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4281 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4332
Score = 85 (35.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 28/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + + V+ G S+A+ G ++ WG D+ G +
Sbjct: 641 GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVYSWGK---GDNQRLGHGTEEH 697
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 698 VRYPKLLEGLQGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 82 (33.9 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3163 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3219
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3220 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 3269
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3270 -IVHVAVGALHCLAVT 3284
Score = 44 (20.5 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 24/81 (29%), Positives = 36/81 (44%)
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 321
T +S +G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3816 TRALSFSGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3868
Query: 322 GAA-HTVLVTDDGYKLWSWGR 341
T+ + +K W+W R
Sbjct: 3869 DLELDTLPCCAETHK-WAWFR 3888
Score = 43 (20.2 bits), Expect = 6.1e-10, Sum P(3) = 6.1e-10
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +G+ S +I F Q S W
Sbjct: 2667 YKWGSVTHQSVGVVKAFSANGKDVIVDFPQQSHW 2700
Score = 39 (18.8 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2976 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3025
Score = 37 (18.1 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S++P
Sbjct: 3746 VTCLLDFRLNLASNRSIIP 3764
>UNIPROTKB|O95714 [details] [associations]
symbol:HERC2 "E3 ubiquitin-protein ligase HERC2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0020037 "heme binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0006886 "intracellular protein transport"
evidence=NAS] [GO:0006281 "DNA repair" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IDA] [GO:0016567
"protein ubiquitination" evidence=IDA] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IPI] [GO:0032183 "SUMO binding"
evidence=IDA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_6900 GO:GO:0006886 GO:GO:0005814 PROSITE:PS00678
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005085 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
Pfam:PF03256 PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183
Gene3D:2.30.30.30 InterPro:IPR021097 InterPro:IPR014722
Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021 CTD:8924 KO:K10595
OMA:QLAFTRD EMBL:AF071172 EMBL:AC091304 EMBL:AC126332 EMBL:AC135329
EMBL:AF224243 EMBL:AF224242 EMBL:AF224245 EMBL:AF224244
EMBL:AF224249 EMBL:AF224246 EMBL:AF224247 EMBL:AF224248
EMBL:AF224251 EMBL:AF224250 EMBL:AF224255 EMBL:AF224254
EMBL:AF224252 EMBL:AF224253 EMBL:AF224257 EMBL:AF224256
EMBL:AF225401 EMBL:AF225400 EMBL:AF225404 EMBL:AF225402
EMBL:AF225403 EMBL:AF225407 EMBL:AF225405 EMBL:AF225406
EMBL:AF225409 EMBL:AF225408 IPI:IPI00005826 RefSeq:NP_004658.3
UniGene:Hs.434890 UniGene:Hs.610412 UniGene:Hs.741019 PDB:2KEO
PDB:3KCI PDBsum:2KEO PDBsum:3KCI ProteinModelPortal:O95714
SMR:O95714 DIP:DIP-37632N IntAct:O95714 STRING:O95714
PhosphoSite:O95714 PaxDb:O95714 PRIDE:O95714
Ensembl:ENST00000261609 GeneID:8924 KEGG:hsa:8924 UCSC:uc001zbj.3
GeneCards:GC15M028356 H-InvDB:HIX0012044 H-InvDB:HIX0017540
H-InvDB:HIX0038121 H-InvDB:HIX0038320 H-InvDB:HIX0038830
H-InvDB:HIX0173226 H-InvDB:HIX0173299 H-InvDB:HIX0194348
HGNC:HGNC:4868 HPA:CAB017188 MIM:227220 MIM:605837
neXtProt:NX_O95714 PharmGKB:PA29243 HOVERGEN:HBG081598
InParanoid:O95714 OrthoDB:EOG41C6V9 PhylomeDB:O95714
EvolutionaryTrace:O95714 GenomeRNAi:8924 NextBio:33552
ArrayExpress:O95714 Bgee:O95714 Genevestigator:O95714
GermOnline:ENSG00000128731 InterPro:IPR006624 SMART:SM00706
Uniprot:O95714
Length = 4834
Score = 207 (77.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 61/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4196
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4197 -LGVVKVECGSQFSVALTKSGAVYTWG 4222
Score = 200 (75.5 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3050 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3106
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3107 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3157
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3158 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3205
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 195 (73.7 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 53/167 (31%), Positives = 81/167 (48%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
HG+++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 630
Score = 166 (63.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3144 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3200
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3201 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3249
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 3250 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3302
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3303 VQGL--EGQKI---TRVACGSSHSVAWT 3325
Score = 165 (63.1 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 45/137 (32%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4057 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4115
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H V +ACG+ A T+ +TDD
Sbjct: 4116 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----VDIACGSGDAQTLCLTDDD 4164
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4165 -TVWSWGDGDYGKLGRG 4180
Score = 157 (60.3 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 61/210 (29%), Positives = 82/210 (39%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + V
Sbjct: 603 LKVIDVACGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDV 659
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VKV CGS+ +AL G+ Y SWG +N +LG G E PK++E
Sbjct: 660 VKVRCGSQFSIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK- 710
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP- 248
V +V GS H LT E W G N Q H T PE LP
Sbjct: 711 --VIDVAAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPG 757
Query: 249 -QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++V + CG + SS + WS G+
Sbjct: 758 LDTKHIVGIACGPAQSFAWSSCSE-WSIGL 786
Score = 156 (60.0 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 574
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 575 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 623
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 624 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 152 (58.6 bits), Expect = 9.4e-05, Sum P(2) = 9.4e-05
Identities = 46/139 (33%), Positives = 71/139 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 273
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 569 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 627
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 331
SWG + G L R + +P LI K QD V+V CG+ ++ +T
Sbjct: 628 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTK 674
Query: 332 DGYKLWSWGRGRSGVLGTG 350
DG +++SWG+G + LG G
Sbjct: 675 DG-QVYSWGKGDNQRLGHG 692
Score = 149 (57.5 bits), Expect = 1.7e-17, Sum P(2) = 1.7e-17
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 148 (57.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4010 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4068
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4069 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4114
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG + D P +V
Sbjct: 4115 WGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 148 (57.2 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 63/227 (27%), Positives = 105/227 (46%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K N + I+ KA G+ S A +++WG L D GG PS
Sbjct: 2933 EEDEKGNSGSLIR---KKAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2985
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 2986 SETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---GEATNGRLGLGISSGTVPIPR 3037
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3038 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3086
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 3087 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3132
Score = 144 (55.7 bits), Expect = 5.5e-17, Sum P(2) = 5.5e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3153 VIQVACGS 3160
Score = 144 (55.7 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4180 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 4236
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y +WG N+ GQLG G +
Sbjct: 4237 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNA 4288
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 4289 IQRPRLVAALQGKK---VNRVACGSAHT 4313
Score = 138 (53.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3171 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3229
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3230 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 3277
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3278 VYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 136 (52.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4167 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4223
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4224 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4273
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 4274 GDNDEGQLGDGTTNAIQRPRLV 4295
Score = 125 (49.1 bits), Expect = 5.2e-15, Sum P(2) = 5.2e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3100 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3156
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3157 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3207
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3208 CQIECGAQFSLALT 3221
Score = 112 (44.5 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 553 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 609
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 610 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VV 660
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 661 KVRCGSQFSIALT 673
Score = 98 (39.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3258 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3314
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3315 ACGSSHSVA 3323
Score = 97 (39.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4276
Query: 280 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4277 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4314
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4219 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4267
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4268 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4319
Score = 86 (35.3 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 28/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + + V+ G S+A+ G ++ WG D+ G +
Sbjct: 640 GGSDGCKTPKLIEKLQDLDVVKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEH 696
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 697 VRYPKLLEGLQGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 740
Score = 82 (33.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3208
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3209 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 3258
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3259 -IVHVAVGALHCLAVT 3273
Score = 71 (30.1 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3987 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4043
Query: 375 LNTGG 379
+N+GG
Sbjct: 4044 VNSGG 4048
Score = 46 (21.3 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+D A Y ++ G+ T T++KR D L + + + EN Q+G
Sbjct: 2530 EDVDDAAYSMSTGAVVTESQTYKKRA-DFLSNDDYAVYVRENIQVG 2574
Score = 44 (20.5 bits), Expect = 2.3e-10, Sum P(3) = 2.3e-10
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +G+ S II F Q S W
Sbjct: 2656 YKWGSVTHQSVGVVKAFSANGKDIIVDFPQQSHW 2689
Score = 43 (20.2 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 321
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3803 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3855
Query: 322 GAA-HTVLVTDDGYKLWSWGR 341
T+ + +K W+W R
Sbjct: 3856 DLELDTLPCCAETHK-WAWFR 3875
Score = 39 (18.8 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2965 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3014
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S+VP
Sbjct: 3733 VTCLLDFRLNLASNRSIVP 3751
>UNIPROTKB|D4ACN3 [details] [associations]
symbol:Herc2 "Protein Herc2" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
RGD:1307989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005743 GO:GO:0046872 GO:GO:0008270 GO:GO:0006281
GO:GO:0007283 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 IPI:IPI00764717 Ensembl:ENSRNOT00000019245
ArrayExpress:D4ACN3 Uniprot:D4ACN3
Length = 4779
Score = 207 (77.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 61/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 3984 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 4040
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 4041 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4089
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4090 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4141
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4142 -LGVVKVECGSQFSVALTKSGAVYTWG 4167
Score = 200 (75.5 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 2994 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3050
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3051 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3101
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3102 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3149
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3150 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3195
Score = 194 (73.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 53/164 (32%), Positives = 80/164 (48%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 430 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTVPL 481
Query: 176 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 482 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 533
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 534 SEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 576
Score = 166 (63.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3088 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3144
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3145 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3193
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 3194 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3246
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3247 VQGL--EGQKI---TRVACGSSHSVAWT 3269
Score = 164 (62.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4002 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4060
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 4061 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 4109
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4110 -TVWSWGDGDYGKLGRG 4125
Score = 159 (61.0 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 62/220 (28%), Positives = 86/220 (39%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + V
Sbjct: 549 LKVIDVACGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDV 605
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+KV CGS+ +AL G+ Y SWG +N +LG G E PK++E
Sbjct: 606 IKVRCGSQFSIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK- 656
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP- 248
V +V GS H LT E W G N Q H T PE LP
Sbjct: 657 --VIDVAAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPG 703
Query: 249 -QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCP 285
++V + CG + SS + WS G+ + +CP
Sbjct: 704 LDTKHIVGIACGPAQSFAWSSCSE-WSIGLRVPFVVDICP 742
Score = 156 (60.0 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 463 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 520
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 521 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 569
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 570 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 597
Score = 151 (58.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 273
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 515 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 573
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 331
SWG + G L R + +P LI K QD ++V CG+ ++ +T
Sbjct: 574 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTK 620
Query: 332 DGYKLWSWGRGRSGVLGTG 350
DG +++SWG+G + LG G
Sbjct: 621 DG-QVYSWGKGDNQRLGHG 638
Score = 149 (57.5 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3207
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3208 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3256
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3257 RVACGSSHSVAWT 3269
Score = 148 (57.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 3955 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4013
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4014 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4059
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG + D P +V
Sbjct: 4060 WGKGRYGRLGHSDSEDQLKPKLV 4082
Score = 144 (55.7 bits), Expect = 6.9e-17, Sum P(2) = 6.9e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2991 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3047
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3048 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3096
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3097 VIQVACGS 3104
Score = 144 (55.7 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4125 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 4181
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y +WG N+ GQLG G +
Sbjct: 4182 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNA 4233
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 4234 IQRPRLVAALQGKK---VNRVACGSAHT 4258
Score = 138 (53.6 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3115 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3173
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3174 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 3221
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3222 VYAWGDNDHGQQGNGTTTVNRKPTLV 3247
Score = 136 (52.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4112 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4168
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4169 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4218
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 4219 GDNDEGQLGDGTTNAIQRPRLV 4240
Score = 136 (52.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 61/227 (26%), Positives = 104/227 (45%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K + + I+ K G+ S A +++WG L D GG PS
Sbjct: 2877 EEDDKGSTGSLIR---KKTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2929
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 2930 SETLSALNVVQVAGGSKSLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPR 2981
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 2982 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3030
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 3031 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3076
Score = 125 (49.1 bits), Expect = 6.5e-15, Sum P(2) = 6.5e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3044 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3100
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3101 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3151
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3152 CQIECGAQFSLALT 3165
Score = 112 (44.5 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 499 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 555
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 556 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VI 606
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 607 KVRCGSQFSIALT 619
Score = 98 (39.6 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3202 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3258
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3259 ACGSSHSVA 3267
Score = 97 (39.2 bits), Expect = 2.1e-10, Sum P(2) = 2.1e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4164 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4221
Query: 280 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4222 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4259
Score = 94 (38.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4164 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4212
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4213 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4264
Score = 86 (35.3 bits), Expect = 8.9e-15, Sum P(2) = 8.9e-15
Identities = 28/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + + V+ G S+A+ G ++ WG D+ G +
Sbjct: 586 GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEH 642
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 643 VRYPKLLEGLQGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 686
Score = 82 (33.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3096 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3152
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3153 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 3202
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3203 -IVHVAVGALHCLAVT 3217
Score = 71 (30.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3932 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 3988
Query: 375 LNTGG 379
+N+GG
Sbjct: 3989 VNSGG 3993
Score = 55 (24.4 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
VQVA G+ VT +G K++S G +G LG G
Sbjct: 2939 VQVAGGSKSLFAVTVEG-KVYSCGEATNGRLGLG 2971
Score = 47 (21.6 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +GL S II F Q S W
Sbjct: 2600 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 2633
Score = 43 (20.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 24/81 (29%), Positives = 35/81 (43%)
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQDPVQVAC 321
T +S G + + KGL P A + E D PI+ G H P F+ V +AC
Sbjct: 3748 TRALSFTGSALA-ALVKGL---PEALQRQFEYED---PIVRGGKQLLHSPFFKVLVALAC 3800
Query: 322 GAA-HTVLVTDDGYKLWSWGR 341
T+ + +K W+W R
Sbjct: 3801 DLELDTLPCCAETHK-WAWFR 3820
Score = 39 (18.8 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2909 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 2958
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S+VP
Sbjct: 3678 VTCLLDFRLNLTSNRSIVP 3696
>MGI|MGI:103234 [details] [associations]
symbol:Herc2 "hect (homologous to the E6-AP (UBE3A) carboxyl
terminus) domain and RCC1 (CHC1)-like domain (RLD) 2" species:10090
"Mus musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;IBA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005743 "mitochondrial inner membrane"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006281
"DNA repair" evidence=ISO] [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016874
"ligase activity" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
evidence=ISO] [GO:0032183 "SUMO binding" evidence=ISO] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS00191 PROSITE:PS01357 PROSITE:PS50082
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS50294
PROSITE:PS51416 SMART:SM00119 SMART:SM00291 UniPathway:UPA00143
MGI:MGI:103234 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005814 PROSITE:PS00678 GO:GO:0005743 GO:GO:0046872
GO:GO:0008270 GO:GO:0006281 GO:GO:0007283 GO:GO:0020037
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 GO:GO:0042787 GO:GO:0032183 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00700000104208 CTD:8924 KO:K10595
OMA:QLAFTRD HOVERGEN:HBG081598 OrthoDB:EOG41C6V9 InterPro:IPR006624
SMART:SM00706 EMBL:AF061529 EMBL:AF071173 EMBL:AC102121
EMBL:AC102150 EMBL:AK141515 EMBL:AK148361 EMBL:AK161826
EMBL:AK162270 EMBL:AK162708 EMBL:AK220338 EMBL:BC044667
EMBL:BC054829 IPI:IPI00309574 IPI:IPI00314989 RefSeq:NP_034548.2
UniGene:Mm.20929 ProteinModelPortal:Q4U2R1 SMR:Q4U2R1 STRING:Q4U2R1
PhosphoSite:Q4U2R1 PaxDb:Q4U2R1 PRIDE:Q4U2R1
Ensembl:ENSMUST00000076226 Ensembl:ENSMUST00000164095 GeneID:15204
KEGG:mmu:15204 UCSC:uc009hdv.1 InParanoid:Q4U2R1 ChiTaRS:HERC2
NextBio:287753 Bgee:Q4U2R1 Genevestigator:Q4U2R1
GermOnline:ENSMUSG00000030451 Uniprot:Q4U2R1
Length = 4836
Score = 207 (77.9 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 61/207 (29%), Positives = 96/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 4097
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG DL Y+WG G+LG D E +L+PK++E
Sbjct: 4098 VAAGGAHSACVTAAG------DL--YTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4146
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4147 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4198
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4199 -LGVVKVECGSQFSVALTKSGAVYTWG 4224
Score = 200 (75.5 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 70/227 (30%), Positives = 105/227 (46%)
Query: 140 VALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ S G T D +SWG ++G+LG R + +P++IE + ++ C
Sbjct: 3051 VAVHSGGRHATALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIAC 3107
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A LT +T+GLGE G+LGHG + L P+ VK L + ++ V
Sbjct: 3108 GSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVA 3158
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQ 314
CG T ++ G V+SWG + G L R + P I NG Q
Sbjct: 3159 CGSRDAQTLALTDEGLVFSWG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------Q 3206
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3207 GVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 194 (73.4 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 53/164 (32%), Positives = 80/164 (48%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 485 PQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTVPL 536
Query: 176 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 537 EEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 588
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
++ +P V L + + ++ V CG T V+ G VWSWG
Sbjct: 589 SEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 631
Score = 166 (63.5 bits), Expect = 1.6e-09, Sum P(2) = 1.6e-09
Identities = 64/208 (30%), Positives = 94/208 (45%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3145 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3201
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHG+ P+
Sbjct: 3202 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQ 3250
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ +G V++WG + G N + T N P L
Sbjct: 3251 VVEGL-RGKKIVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3303
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3304 VQGL--EGQKI---TRVACGSSHSVAWT 3326
Score = 164 (62.8 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 44/137 (32%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V V G H++ V++AGD+++W
Sbjct: 4059 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTW 4117
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L +++ D + P L+ H + +ACG+ A T+ +TDD
Sbjct: 4118 G--KGR----YGRLGHSDSEDQLKPKLVEALQGHRV-----IDIACGSGDAQTLCLTDDD 4166
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4167 -TVWSWGDGDYGKLGRG 4182
Score = 156 (60.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 60/210 (28%), Positives = 82/210 (39%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + V
Sbjct: 604 LKVIDVACGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDV 660
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+KV CGS+ +AL G+ Y SWG +N +LG G E PK++E
Sbjct: 661 IKVRCGSQFSIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK- 711
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP- 248
V +V GS H LT E W G N Q H T PE LP
Sbjct: 712 --VIDVAAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPG 758
Query: 249 -QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++V + CG + SS + WS G+
Sbjct: 759 LDSKHIVGIACGPAQSFAWSSCSE-WSIGL 787
Score = 156 (60.0 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 45/149 (30%), Positives = 80/149 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 575
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG +G L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 576 WG--RG----NYGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 624
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 625 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 151 (58.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 45/139 (32%), Positives = 71/139 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVW 273
E +T+G G G+LGHG+++ +P V L + + ++ V CG T V+ G VW
Sbjct: 570 EGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVW 628
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTD 331
SWG + G L R + +P LI K QD ++V CG+ ++ +T
Sbjct: 629 SWG-DGDYG-----KLGRGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTK 675
Query: 332 DGYKLWSWGRGRSGVLGTG 350
DG +++SWG+G + LG G
Sbjct: 676 DG-QVYSWGKGDNQRLGHG 693
Score = 149 (57.5 bits), Expect = 2.1e-17, Sum P(2) = 2.1e-17
Identities = 38/133 (28%), Positives = 59/133 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 148 (57.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 48/143 (33%), Positives = 72/143 (50%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4012 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4070
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V VA G AH+ VT G L++
Sbjct: 4071 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYT 4116
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG + D P +V
Sbjct: 4117 WGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 144 (55.7 bits), Expect = 7.0e-17, Sum P(2) = 7.0e-17
Identities = 39/128 (30%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3154 VIQVACGS 3161
Score = 144 (55.7 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 43/148 (29%), Positives = 61/148 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4182 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 4238
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y +WG N+ GQLG G +
Sbjct: 4239 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNA 4290
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 4291 IQRPRLVAALQGKK---VNRVACGSAHT 4315
Score = 138 (53.6 bits), Expect = 4.3e-14, Sum P(2) = 4.3e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3172 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3230
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3231 G--KG----DYFRLGHGSDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDSG-Q 3278
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3279 VYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 136 (52.9 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 41/142 (28%), Positives = 67/142 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4169 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTWG--K 4225
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L P + G G K + +A G+ H V T+DG ++++W
Sbjct: 4226 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-EVYTW 4275
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P +V
Sbjct: 4276 GDNDEGQLGDGTTNAIQRPRLV 4297
Score = 136 (52.9 bits), Expect = 2.5e-06, Sum P(2) = 2.5e-06
Identities = 61/227 (26%), Positives = 104/227 (45%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K + + I+ K G+ S A +++WG L D GG PS
Sbjct: 2934 EEDDKGSTGSLIR---KKTPGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2986
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y C G NG+LGLG + P+
Sbjct: 2987 SETLSALNVVQVAGGSKSLFAVTVEGKVYS-----C---GEATNGRLGLGMSSGTVPIPR 3038
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3039 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LG 282
P ++ L + + + CG H++ ++S+G++++WG+ E G LG
Sbjct: 3088 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGEYGRLG 3133
Score = 125 (49.1 bits), Expect = 6.6e-15, Sum P(2) = 6.6e-15
Identities = 41/134 (30%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3101 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3158 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3208
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3209 CQIECGAQFSLALT 3222
Score = 112 (44.5 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 42/133 (31%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ VA
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDEAIPMLVAGLKGLKVIDVA 610
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD V
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--VI 661
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 98 (39.6 bits), Expect = 4.2e-12, Sum P(2) = 4.2e-12
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3259 KIVHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3315
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3316 ACGSSHSVA 3324
Score = 97 (39.2 bits), Expect = 2.2e-10, Sum P(2) = 2.2e-10
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4278
Query: 280 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4279 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKVN---RVACGSAHTL 4316
Score = 94 (38.1 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4221 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4269
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4270 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVACGSAHTLAWSTS 4321
Score = 86 (35.3 bits), Expect = 9.1e-15, Sum P(2) = 9.1e-15
Identities = 28/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + + V+ G S+A+ G ++ WG D+ G +
Sbjct: 641 GGSDGCKTPKLIEKLQDLDVIKVRCGSQFSIALTKDGQVYSWGK---GDNQRLGHGTEEH 697
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 698 VRYPKLLEGLQGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 82 (33.9 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3209
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3210 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGSDVHVRKPQVVEGLRGKK-- 3259
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3260 -IVHVAVGALHCLAVT 3274
Score = 71 (30.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3989 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4045
Query: 375 LNTGG 379
+N+GG
Sbjct: 4046 VNSGG 4050
Score = 55 (24.4 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
VQVA G+ VT +G K++S G +G LG G
Sbjct: 2996 VQVAGGSKSLFAVTVEG-KVYSCGEATNGRLGLG 3028
Score = 47 (21.6 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 12/34 (35%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +GL S II F Q S W
Sbjct: 2657 YKWGSVTHQSVGLVKAFSANGKDIIVDFPQQSHW 2690
Score = 40 (19.1 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 300 PILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 341
PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3835 PIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3877
Score = 39 (18.8 bits), Expect = 3.0e-09, Sum P(2) = 3.0e-09
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2966 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3015
Score = 38 (18.4 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 6/19 (31%), Positives = 12/19 (63%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L + + S+VP
Sbjct: 3735 VTCLLDFRLNLTSNRSIVP 3753
>UNIPROTKB|F1N1N9 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050688 "regulation of defense response to virus"
evidence=IEA] [GO:0042296 "ISG15 ligase activity" evidence=IEA]
[GO:0032020 "ISG15-protein conjugation" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050688 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT GO:GO:0042296
GO:GO:0032020 EMBL:DAAA02017014 IPI:IPI00907336
Ensembl:ENSBTAT00000052811 Uniprot:F1N1N9
Length = 959
Score = 243 (90.6 bits), Expect = 4.3e-17, P = 4.3e-17
Identities = 77/221 (34%), Positives = 104/221 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG L D G S+ TP V + G +V+++
Sbjct: 150 IIQITCGDYHSLALSKGGELFAWGQ-NL-DGQLGVGRIFASTSTPEIVENLSGVPLVQIS 207
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G Y SWG N+ GQLGLG ++ P IE + V
Sbjct: 208 AGEAHSMALSMSGNVY--------SWGRNDCGQLGLGHTYNKESPSCIEALDDQK---VE 256
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + +TFG G+ GQLGH +TQ+ L P V L +
Sbjct: 257 FLACGGCHTALLTK--------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-RV 307
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ CG HT + VS G V+S+G K G N TRN+
Sbjct: 308 TQIACGRQHTLAYVSDTGKVFSFGSGKE-GQLGNGG-TRNQ 346
Score = 147 (56.8 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 51/171 (29%), Positives = 76/171 (44%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 250
+ ++TCG +H+ L+ E W G +GQLG G S PE V+ L
Sbjct: 150 IIQITCGDYHSLALSKGG------ELFAW--GQNLDGQLGVGRIFASTSTPEIVENLSG- 200
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V LV + G H+ +S +G+V+SWG C L + SP I
Sbjct: 201 VPLVQISAGEAHSMALSMSGNVYSWGRND----CGQLGLGHTYNKE--SPSCIEALDDQK 254
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+F +ACG HT L+T G ++++G G+ G LG T + P +V
Sbjct: 255 VEF-----LACGGCHTALLTKSGL-VFTFGDGKYGQLGHNSTQNELRPRLV 299
Score = 136 (52.9 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 45/140 (32%), Positives = 75/140 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++G + GQLG G T + P ++ L Q V ++ CG HT++++ +G V+++G
Sbjct: 223 YSWGRNDCGQLGLGHTYNKESPSCIEALDDQKVEFLA--CGGCHTALLTKSGLVFTFGDG 280
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
K L N+ T+NE + P L++G G + Q+ACG HT+ D K++S
Sbjct: 281 KYGQLGHNS--TQNE----LRPRLVTGLV--GNRV---TQIACGRQHTLAYVSDTGKVFS 329
Query: 339 WGRGRSGVLGTGKTIDFFAP 358
+G G+ G LG G T + P
Sbjct: 330 FGSGKEGQLGNGGTRNQLIP 349
>ZFIN|ZDB-GENE-030131-7951 [details] [associations]
symbol:rcbtb1 "regulator of chromosome
condensation (RCC1) and BTB (POZ) domain containing protein 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-030131-7951 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
CTD:55213 HOVERGEN:HBG053261 KO:K11494 HSSP:O87916 EMBL:BC045877
IPI:IPI00503126 RefSeq:NP_956285.1 UniGene:Dr.5968
ProteinModelPortal:Q7ZVG0 GeneID:336007 KEGG:dre:336007
InParanoid:Q7ZVG0 NextBio:20811137 ArrayExpress:Q7ZVG0
Uniprot:Q7ZVG0
Length = 531
Score = 233 (87.1 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 69/212 (32%), Positives = 101/212 (47%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED Y+WG N QLG G + P ++ T Q V EV+CGS H+ LTH
Sbjct: 92 EDGELYAWGHNGYSQLGNGTTNQGVSPILVSTNLQGK--RVTEVSCGSHHSLALTHEG-- 147
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
E W G GQ+G G+T + P +V Q +V++ CG + V+ G+
Sbjct: 148 ----EVFAW--GYNNCGQVGSGSTANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVT 330
V+ WG G N L G+ ++P LI+ G F +Q+A G AH++ +T
Sbjct: 202 VYGWGYN-G-----NGQLGLGNNGNQLTPCRLIALQG-----FC-VLQIASGYAHSLALT 249
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
D+G L++WG G LGTG + +P V+
Sbjct: 250 DEGL-LYAWGANTYGQLGTGNKSNQLSPVQVM 280
Score = 147 (56.8 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 45/156 (28%), Positives = 73/156 (46%)
Query: 131 KVA-CGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFN 185
KV+ C V+ ++ G+T ++ Y WG N NGQLGLG+ ++L P ++I
Sbjct: 173 KVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNGNQLTPCRLIAL-- 230
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ V ++ G H+ LT E + + +G GQLG G + L P QV
Sbjct: 231 --QGFCVLQIASGYAHSLALTD--------EGLLYAWGANTYGQLGTGNKSNQLSPVQVM 280
Query: 246 ELPQYVYLVSVDCGLFHTSVVSS-AGDVWSWGMEKG 280
+ + ++ C HTS + +G V+ WG +G
Sbjct: 281 TEKERIVEIAA-CHSTHTSAAKTQSGQVYMWGQCRG 315
Score = 129 (50.5 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 44/160 (27%), Positives = 71/160 (44%)
Query: 73 KICSVKAG-GMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
K+ S+ G G L + G L+ WG+ L + +T G S + T + G
Sbjct: 75 KLISLSYGSGPHVLLVTEDGELYAWGHNGYSQLGNGTTNQGVSPILVST-----NLQGKR 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +V+CGS H +AL T++GE ++WG NN GQ+G G ++ P+ + Q+
Sbjct: 130 VTEVSCGSHHSLAL-----THEGE---VFAWGYNNCGQVGSGSTANQPTPRKVSNCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
+ + CG + +T + GLG NG
Sbjct: 182 --VIVNIACGQTSSMAVTDNGEVYGWGYNGNGQLGLGNNG 219
Score = 119 (46.9 bits), Expect = 0.00069, P = 0.00068
Identities = 36/131 (27%), Positives = 62/131 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I ++ G S+A+ + G ++ WG + G + + TP + G V+++A
Sbjct: 183 IVNIACGQTSSMAVTDNGEVYGWG---YNGNGQLGLGNNGNQLTPCRLIALQGFCVLQIA 239
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL G + Y+WGAN GQLG G++ ++L P + T + +
Sbjct: 240 SGYAHSLALTDEG--------LLYAWGANTYGQLGTGNKSNQLSPVQVMTEKE----RIV 287
Query: 194 EVT-CGSFHTA 203
E+ C S HT+
Sbjct: 288 EIAACHSTHTS 298
Score = 88 (36.0 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 44/189 (23%), Positives = 78/189 (41%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G NGQLG G + L P ++ L + L + G H+ ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRLIALQGFCVL-QIASGYAHSLALTDEGLLYAWGANT-- 261
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 340
L + +SP+ + + + V++A C + HT +++ WG
Sbjct: 262 ----YGQLGTGNKSNQLSPVQVM------TEKERIVEIAACHSTHTSAAKTQSGQVYMWG 311
Query: 341 --RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 391
RG++ VL T FA V+W L+ E D+ T + +K K+ +
Sbjct: 312 QCRGQAIVLPHLTHFASTDDVFACFATPSVMWRMLSME--HDDFLT--VAQSLK-KEFDN 366
Query: 392 AEERDEKLS 400
E D + S
Sbjct: 367 PETSDLEFS 375
>UNIPROTKB|E1BW48 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0020037
"heme binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005743 "mitochondrial inner membrane" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0031625 "ubiquitin protein
ligase binding" evidence=IEA] [GO:0032183 "SUMO binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005743 GO:GO:0046872 GO:GO:0008270
GO:GO:0006281 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.10.120.10 SUPFAM:SSF55856
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256
PROSITE:PS51284 SUPFAM:SSF46934 Gene3D:2.30.30.30
InterPro:IPR021097 InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 OMA:QLAFTRD EMBL:AADN02017653
IPI:IPI00571031 Ensembl:ENSGALT00000027018 ArrayExpress:E1BW48
Uniprot:E1BW48
Length = 4841
Score = 226 (84.6 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 73/240 (30%), Positives = 115/240 (47%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDTVPL 536
Query: 176 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
PK+I + + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 588
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
++ +P V L + + ++ V CG T V+ G VWSWG + G L R
Sbjct: 589 SEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KLGRG 641
Query: 293 EAGDAISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P LI K QD V+V CG+ ++ +T DG ++++WG+G + LG G
Sbjct: 642 GSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRLGHG 693
Score = 214 (80.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 60/207 (28%), Positives = 98/207 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 4100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AG DL ++WG G+LG GD E +L+PK++E +
Sbjct: 4101 IAAGGAHSACITAAG------DL--FTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4149
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4150 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTD 4201
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4202 -LGVVKVECGSQFSVALTKSGAVYTWG 4227
Score = 196 (74.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 63/208 (30%), Positives = 98/208 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG ++G+LG R + +P++IE + ++ CGS H+A +T
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAAITS--------S 3121
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWS 274
+T+GLGE G+LGHG + L P+ VK L + ++ V CG T ++ G V+S
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVACGSRDAQTLALTDEGLVFS 3180
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDG 333
WG + G L R + P I NG Q Q+ CGA ++ +T G
Sbjct: 3181 WG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------QGVCQIECGAQFSLALTKSG 3228
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+W+WG+G LG G + P +V
Sbjct: 3229 V-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 170 (64.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 72/257 (28%), Positives = 121/257 (47%)
Query: 101 LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG 160
L D GG PS VV+VA GS+ + A+ G+ Y C G
Sbjct: 2970 LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---G 3021
Query: 161 ANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLES 217
NG+LGLG + P+ I S + V +V G H LT ++
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQITAL---SNYVVKKVAVHSGGRHAMALT--------VDG 3070
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+++G G++G+LGH + + P ++ L + + + CG H++ ++S+G++++WG+
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYTWGL 3129
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
E G LG N + + + + +L+ G + +QVACG+ A T+ +TD+G
Sbjct: 3130 GEYGRLGHGDNTTQLKPK----MVKVLL------GHRV---IQVACGSRDAQTLALTDEG 3176
Query: 334 YKLWSWGRGRSGVLGTG 350
++SWG G G LG G
Sbjct: 3177 L-VFSWGDGDFGKLGRG 3192
Score = 169 (64.5 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3148 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3204
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHGT P+
Sbjct: 3205 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGTDVHVRKPQ 3253
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ G V++WG + G N + T N P L
Sbjct: 3254 VVEGL-RGKKIVHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3306
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3307 VQGL--EGQKI---TRVACGSSHSVAWT 3329
Score = 157 (60.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V + G H++ +++AGD+++W
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L ++ D + P L+ G + D +ACG+ A T+ +TDD
Sbjct: 4121 G--KGR----YGRLGHGDSEDQLKPKLVEAL--QGYRVID---IACGSGDAQTLCLTDDD 4169
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4170 -TVWSWGDGDYGKLGRG 4185
Score = 155 (59.6 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + L ++V + CG +++ +++ G++++WG
Sbjct: 518 FSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
+G L + D P+L++G G K D V+CG+ A T+ VT++G
Sbjct: 578 --RG----NYGRLGHGSSEDQTIPMLVTGL--KGLKVID---VSCGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 151 (58.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 47/143 (32%), Positives = 73/143 (51%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V +A G AH+ +T G L++
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAAGGAHSACITAAG-DLFT 4119
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG G + D P +V
Sbjct: 4120 WGKGRYGRLGHGDSEDQLKPKLV 4142
Score = 146 (56.5 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKIFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAAITSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3157 VIQVACGS 3164
Score = 146 (56.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 45/158 (28%), Positives = 65/158 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4185 GGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 4241
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V G GE Y+WG N+ GQLG G +
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---LGE---VYTWGDNDEGQLGDGTTNA 4295
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
RP+++ + V CGS HT + K N
Sbjct: 4296 IQRPRLVAALQGKK---INRVACGSAHTLAWSTSKPAN 4330
Score = 145 (56.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDTGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 137 (53.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTD-LGVVKVECGSQFSVALTKSGAVYTWG--K 4228
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY-KLWS 338
G L P + G G K + +A G+ H V T+DG ++++
Sbjct: 4229 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDGLGEVYT 4279
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G LG G T P +V
Sbjct: 4280 WGDNDEGQLGDGTTNAIQRPRLV 4302
Score = 136 (52.9 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3233
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3234 G--KG----DYFRLGHGTDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDTG-Q 3281
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3282 VYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 130 (50.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 40/137 (29%), Positives = 57/137 (41%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + +
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDI 660
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VKV CGS+ +AL G+ Y +WG +N +LG G E PK++E
Sbjct: 661 VKVRCGSQFSIALTKDGQVY--------TWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK- 711
Query: 190 WAVYEVTCGSFHTALLT 206
V +V GS H LT
Sbjct: 712 --VIDVAAGSTHCLALT 726
Score = 127 (49.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S AI ++G L+ WG L + G + P V GH V++V
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3160
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3161 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3211
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3212 CQIECGAQFSLALT 3225
Score = 109 (43.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 40/133 (30%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD +
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--IV 661
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 107 (42.7 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
+ WG N+ QLG G + S+++ P ET S V +V GS +T +
Sbjct: 2966 FVWGLNDKDQLG-GLKGSKIKVPSFSETL---SALNVVQVAGGSKSLFAVT--------V 3013
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVW 273
E + G NG+LG G + + +P Q+ L YV V+V G H ++ G ++
Sbjct: 3014 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIF 3073
Query: 274 SWG 276
SWG
Sbjct: 3074 SWG 3076
Score = 99 (39.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 34/113 (30%), Positives = 50/113 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T D L
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE-----DGLG 4275
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4276 EV-YTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVACGSAHTLAWSTS 4326
Score = 97 (39.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3318
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3319 ACGSSHSVA 3327
Score = 88 (36.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS--AGDVWSWGM 277
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGLGEVYTWG- 4281
Query: 278 EKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
+ G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4282 DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKIN---RVACGSAHTL 4321
Score = 86 (35.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + I V+ G S+A+ G ++ WG D+ G +
Sbjct: 641 GGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK---GDNQRLGHGTEEH 697
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 698 VRYPKLLEGLKGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3156 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3212
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3213 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK-- 3262
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3263 -IVHVAVGALHCLAVT 3277
Score = 75 (31.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 39/149 (26%), Positives = 63/149 (42%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ + + +GL + QLG G S + E + +V V G V+ G V++
Sbjct: 2961 IRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
G G LGL ++ +G P I+ + K V V G H + +T D
Sbjct: 3020 CGEATNGRLGL----GIS---SGTVPIPRQITALSNYVVK---KVAVHSGGRHAMALTVD 3069
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K++SWG G G LG ++ P ++
Sbjct: 3070 G-KIFSWGEGDDGKLGHFSRMNCDKPRLI 3097
Score = 71 (30.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3992 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4048
Query: 375 LNTGG 379
+N+GG
Sbjct: 4049 VNSGG 4053
Score = 44 (20.5 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L F+ + S+VP
Sbjct: 3738 VTCLLDFRLNFASNRSIVP 3756
Score = 43 (20.2 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +G+ S +I F Q S W
Sbjct: 2660 YKWGSVTHRSVGVVKAFSANGKDVIVDFPQQSHW 2693
Score = 41 (19.5 bits), Expect = 0.00059, Sum P(3) = 0.00058
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 296 DAISPILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 341
D PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3834 DYEDPIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3880
Score = 39 (18.8 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2969 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 346 VLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 392
+LG + D A+ EE D+ NTG L + K LE A
Sbjct: 2913 ILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRK-KAAGLESA 2958
Score = 37 (18.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 129 VVKVACGSEHVVALVSAGETY 149
VV++AC + + L G Y
Sbjct: 454 VVQIACAEKRFLILSRNGRVY 474
>UNIPROTKB|E1C8K2 [details] [associations]
symbol:HERC2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0020037 "heme binding"
evidence=IEA] Pfam:PF00632 InterPro:IPR000433 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF00569 Pfam:PF06701 PROSITE:PS01357
PROSITE:PS50135 PROSITE:PS50237 PROSITE:PS50255 PROSITE:PS51416
SMART:SM00119 SMART:SM00291 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 EMBL:AADN02017653 IPI:IPI00818548
Ensembl:ENSGALT00000036596 ArrayExpress:E1C8K2 Uniprot:E1C8K2
Length = 4841
Score = 226 (84.6 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 73/240 (30%), Positives = 115/240 (47%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDTVPL 536
Query: 176 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
PK+I + + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 537 EEPKLISALSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGHGS 588
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
++ +P V L + + ++ V CG T V+ G VWSWG + G L R
Sbjct: 589 SEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KLGRG 641
Query: 293 EAGDAISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P LI K QD V+V CG+ ++ +T DG ++++WG+G + LG G
Sbjct: 642 GSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRLGHG 693
Score = 214 (80.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 60/207 (28%), Positives = 98/207 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG D G + P + G VV
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGIEVVD 4100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AG DL ++WG G+LG GD E +L+PK++E +
Sbjct: 4101 IAAGGAHSACITAAG------DL--FTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4149
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4150 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTD 4201
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4202 -LGVVKVECGSQFSVALTKSGAVYTWG 4227
Score = 196 (74.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 63/208 (30%), Positives = 98/208 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG ++G+LG R + +P++IE + ++ CGS H+A +T
Sbjct: 3073 FSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAAITS--------S 3121
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWS 274
+T+GLGE G+LGHG + L P+ VK L + ++ V CG T ++ G V+S
Sbjct: 3122 GELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVACGSRDAQTLALTDEGLVFS 3180
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDG 333
WG + G L R + P I NG Q Q+ CGA ++ +T G
Sbjct: 3181 WG-DGDFG-----KLGRGGSEGCNIPQNIERLNG------QGVCQIECGAQFSLALTKSG 3228
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+W+WG+G LG G + P +V
Sbjct: 3229 V-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 170 (64.9 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 72/257 (28%), Positives = 121/257 (47%)
Query: 101 LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG 160
L D GG PS VV+VA GS+ + A+ G+ Y C G
Sbjct: 2970 LNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY-----AC---G 3021
Query: 161 ANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLES 217
NG+LGLG + P+ I S + V +V G H LT ++
Sbjct: 3022 EATNGRLGLGISSGTVPIPRQITAL---SNYVVKKVAVHSGGRHAMALT--------VDG 3070
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+++G G++G+LGH + + P ++ L + + + CG H++ ++S+G++++WG+
Sbjct: 3071 KIFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYTWGL 3129
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
E G LG N + + + + +L+ G + +QVACG+ A T+ +TD+G
Sbjct: 3130 GEYGRLGHGDNTTQLKPK----MVKVLL------GHRV---IQVACGSRDAQTLALTDEG 3176
Query: 334 YKLWSWGRGRSGVLGTG 350
++SWG G G LG G
Sbjct: 3177 L-VFSWGDGDFGKLGRG 3192
Score = 169 (64.5 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 65/208 (31%), Positives = 93/208 (44%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E LV +SWG + G+LG G E P+ IE
Sbjct: 3148 MVKVLLG--HRVIQVACGSRDAQTLALTDEGLV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3204
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHGT P+
Sbjct: 3205 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGTDVHVRKPQ 3253
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ G V++WG + G N + T N P L
Sbjct: 3254 VVEGL-RGKKIVHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTTVNR-----KPTL 3306
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3307 VQGL--EGQKI---TRVACGSSHSVAWT 3329
Score = 157 (60.3 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 43/137 (31%), Positives = 72/137 (52%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + + +V + G H++ +++AGD+++W
Sbjct: 4062 EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHSACITAAGDLFTW 4120
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L ++ D + P L+ G + D +ACG+ A T+ +TDD
Sbjct: 4121 G--KGR----YGRLGHGDSEDQLKPKLVEAL--QGYRVID---IACGSGDAQTLCLTDDD 4169
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4170 -TVWSWGDGDYGKLGRG 4185
Score = 155 (59.6 bits), Expect = 0.00064, Sum P(3) = 0.00064
Identities = 43/147 (29%), Positives = 78/147 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + L ++V + CG +++ +++ G++++WG
Sbjct: 518 FSWGCGDGGRLGHGDTVPLEEPKLISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
+G L + D P+L++G G K D V+CG+ A T+ VT++G
Sbjct: 578 --RG----NYGRLGHGSSEDQTIPMLVTGL--KGLKVID---VSCGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 151 (58.2 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 47/143 (32%), Positives = 73/143 (51%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEK 279
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E
Sbjct: 4015 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAED 4073
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG + R +++ I + V +A G AH+ +T G L++
Sbjct: 4074 GKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAAGGAHSACITAAG-DLFT 4119
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG G + D P +V
Sbjct: 4120 WGKGRYGRLGHGDSEDQLKPKLV 4142
Score = 146 (56.5 bits), Expect = 2.5e-16, Sum P(2) = 2.5e-16
Identities = 38/128 (29%), Positives = 62/128 (48%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKIFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y +WG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAAITSSGELY--------TWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGS 199
V +V CGS
Sbjct: 3157 VIQVACGS 3164
Score = 146 (56.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 45/158 (28%), Positives = 65/158 (41%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4185 GGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 4241
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V G GE Y+WG N+ GQLG G +
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDG---LGE---VYTWGDNDEGQLGDGTTNA 4295
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
RP+++ + V CGS HT + K N
Sbjct: 4296 IQRPRLVAALQGKK---INRVACGSAHTLAWSTSKPAN 4330
Score = 145 (56.1 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 37/133 (27%), Positives = 58/133 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDTGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 137 (53.3 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 41/143 (28%), Positives = 67/143 (46%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++WG K
Sbjct: 4172 WSWGDGDYGKLGRGGSDGCKVPMKIDSLTD-LGVVKVECGSQFSVALTKSGAVYTWG--K 4228
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY-KLWS 338
G L P + G G K + +A G+ H V T+DG ++++
Sbjct: 4229 G----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDGLGEVYT 4279
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G LG G T P +V
Sbjct: 4280 WGDNDEGQLGDGTTNAIQRPRLV 4302
Score = 136 (52.9 bits), Expect = 4.2e-14, Sum P(2) = 4.2e-14
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E + +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3175 EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3233
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VTD G +
Sbjct: 3234 G--KG----DYFRLGHGTDVHVRKPQVVEGL--RGKKI---VHVAVGALHCLAVTDTG-Q 3281
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3282 VYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 130 (50.8 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 40/137 (29%), Positives = 57/137 (41%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP + +
Sbjct: 604 LKVIDVSCGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLIEKLQDLDI 660
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VKV CGS+ +AL G+ Y +WG +N +LG G E PK++E
Sbjct: 661 VKVRCGSQFSIALTKDGQVY--------TWGKGDNQRLGHGTEEHVRYPKLLEGLKGKK- 711
Query: 190 WAVYEVTCGSFHTALLT 206
V +V GS H LT
Sbjct: 712 --VIDVAAGSTHCLALT 726
Score = 127 (49.8 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 42/134 (31%), Positives = 59/134 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S AI ++G L+ WG L + G + P V GH V++V
Sbjct: 3104 RIRDIACGSSHSAAITSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3160
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E LV +SWG + G+LG G E P+ IE N V
Sbjct: 3161 ACGSRDAQTLALTDE-----GLV-FSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG---V 3211
Query: 193 YEVTCGSFHTALLT 206
++ CG+ + LT
Sbjct: 3212 CQIECGAQFSLALT 3225
Score = 109 (43.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 40/133 (30%), Positives = 55/133 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGR---GNYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L T G+ +SWG + G+LG G + PK+IE QD +
Sbjct: 611 CGSGDAQTLAV---TENGQ---VWSWGDGDYGKLGRGGSDGCKTPKLIEKL-QDLD--IV 661
Query: 194 EVTCGSFHTALLT 206
+V CGS + LT
Sbjct: 662 KVRCGSQFSIALT 674
Score = 107 (42.7 bits), Expect = 6.3e-07, Sum P(3) = 6.3e-07
Identities = 37/123 (30%), Positives = 57/123 (46%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
+ WG N+ QLG G + S+++ P ET S V +V GS +T +
Sbjct: 2966 FVWGLNDKDQLG-GLKGSKIKVPSFSETL---SALNVVQVAGGSKSLFAVT--------V 3013
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVW 273
E + G NG+LG G + + +P Q+ L YV V+V G H ++ G ++
Sbjct: 3014 EGKVYACGEATNGRLGLGISSGTVPIPRQITALSNYVVKKVAVHSGGRHAMALTVDGKIF 3073
Query: 274 SWG 276
SWG
Sbjct: 3074 SWG 3076
Score = 99 (39.9 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 34/113 (30%), Positives = 50/113 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T D L
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE-----DGLG 4275
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4276 EV-YTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVACGSAHTLAWSTS 4326
Score = 97 (39.2 bits), Expect = 3.0e-11, Sum P(2) = 3.0e-11
Identities = 22/69 (31%), Positives = 34/69 (49%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3262 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3318
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3319 ACGSSHSVA 3327
Score = 88 (36.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS--AGDVWSWGM 277
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG
Sbjct: 4224 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGLGEVYTWG- 4281
Query: 278 EKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
+ G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4282 DNDEGQLGDG--TTN----AIQRPRLVAAL--QGKKIN---RVACGSAHTL 4321
Score = 86 (35.3 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 29/112 (25%), Positives = 44/112 (39%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + + I V+ G S+A+ G ++ WG D+ G +
Sbjct: 641 GGSDGCKTPKLIEKLQDLDIVKVRCGSQFSIALTKDGQVYTWGK---GDNQRLGHGTEEH 697
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
P + G V+ VA GS H +AL ED +SWG+N+ Q
Sbjct: 698 VRYPKLLEGLKGKKVIDVAAGSTHCLALT--------EDSEVHSWGSNDQCQ 741
Score = 81 (33.6 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 29/136 (21%), Positives = 56/136 (41%)
Query: 73 KICSVKAGGM--MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ V G +LA+ + G ++ WG+ D G P + +G V
Sbjct: 3156 RVIQVACGSRDAQTLALTDEGLVFSWGD---GDFGKLGRGGSEGCNIPQNIERLNGQGVC 3212
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG++ +AL +G V ++WG + +LG G +P+++E
Sbjct: 3213 QIECGAQFSLALTKSG--------VVWTWGKGDYFRLGHGTDVHVRKPQVVEGLRGKK-- 3262
Query: 191 AVYEVTCGSFHTALLT 206
+ V G+ H +T
Sbjct: 3263 -IVHVAVGALHCLAVT 3277
Score = 75 (31.5 bits), Expect = 4.3e-06, Sum P(2) = 4.3e-06
Identities = 39/149 (26%), Positives = 63/149 (42%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ + + +GL + QLG G S + E + +V V G V+ G V++
Sbjct: 2961 IRTKVFVWGLNDKDQLG-GLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVYA 3019
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
G G LGL ++ +G P I+ + K V V G H + +T D
Sbjct: 3020 CGEATNGRLGL----GIS---SGTVPIPRQITALSNYVVK---KVAVHSGGRHAMALTVD 3069
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K++SWG G G LG ++ P ++
Sbjct: 3070 G-KIFSWGEGDDGKLGHFSRMNCDKPRLI 3097
Score = 71 (30.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 23/65 (35%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F K+
Sbjct: 3992 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIKKVA 4048
Query: 375 LNTGG 379
+N+GG
Sbjct: 4049 VNSGG 4053
Score = 44 (20.5 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L F+ + S+VP
Sbjct: 3738 VTCLLDFRLNFASNRSIVP 3756
Score = 43 (20.2 bits), Expect = 2.1e-09, Sum P(3) = 2.1e-09
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
Y WG+ + +G+ S +I F Q S W
Sbjct: 2660 YKWGSVTHRSVGVVKAFSANGKDVIVDFPQQSHW 2693
Score = 41 (19.5 bits), Expect = 0.00059, Sum P(3) = 0.00058
Identities = 15/48 (31%), Positives = 22/48 (45%)
Query: 296 DAISPILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 341
D PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3834 DYEDPIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3880
Score = 39 (18.8 bits), Expect = 9.9e-13, Sum P(2) = 9.9e-13
Identities = 9/50 (18%), Positives = 24/50 (48%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A + G ++
Sbjct: 2969 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKVY 3018
Score = 38 (18.4 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 15/47 (31%), Positives = 20/47 (42%)
Query: 346 VLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 392
+LG + D A+ EE D+ NTG L + K LE A
Sbjct: 2913 ILGRIRAEDEDLAAVPFLASDNEEEDDDKANTGSLVRK-KAAGLESA 2958
Score = 37 (18.1 bits), Expect = 1.4e-08, Sum P(3) = 1.4e-08
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 129 VVKVACGSEHVVALVSAGETY 149
VV++AC + + L G Y
Sbjct: 454 VVQIACAEKRFLILSRNGRVY 474
>TAIR|locus:2146142 [details] [associations]
symbol:AT5G16040 "AT5G16040" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008536 "Ran GTPase binding" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688 EMBL:AL391145
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.19750
UniGene:At.49027 EMBL:BT028960 IPI:IPI00525887 PIR:T51387
RefSeq:NP_197108.1 HSSP:O87916 ProteinModelPortal:Q9LFS0 SMR:Q9LFS0
PRIDE:Q9LFS0 EnsemblPlants:AT5G16040.1 GeneID:831461
KEGG:ath:AT5G16040 TAIR:At5g16040 InParanoid:Q9LFS0 OMA:TTGHPME
PhylomeDB:Q9LFS0 ProtClustDB:CLSN2686124 Genevestigator:Q9LFS0
Uniprot:Q9LFS0
Length = 396
Score = 169 (64.5 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 53/164 (32%), Positives = 83/164 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
W +G E GQLG G TQ P V+ L LV + G +H++ +++ G+V+ WG E
Sbjct: 218 WAWGNNEYGQLGTGDTQPRSYPIPVQGLDDLT-LVDIAAGGWHSTALTNEGEVYGWGRGE 276
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LG N ++ ++ L++G +D +QV+CG H+V +T DG +++
Sbjct: 277 HGRLGFGDNDKSSKM-LPQKVN--LLAG--------EDIIQVSCGGTHSVALTRDG-RIF 324
Query: 338 SWGRGRSGVLGTGKTIDFFAPAI--VLWPPLTEEFKQ-DELNTG 378
S+GRG G LG G+ + P + PP F DE + G
Sbjct: 325 SFGRGDHGRLGYGRKVTTGQPLELPIHIPPPEGRFNHTDEEDDG 368
Score = 166 (63.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 52/186 (27%), Positives = 87/186 (46%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLGLG E + +++ P+ V V GS ++ + +
Sbjct: 9 AWGSGEDGQLGLGTDEEKELASVVDALE---PFNVRSVVGGSRNSLAICD--------DG 57
Query: 218 MCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ P VK L V +V G +H V G ++WG
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLAN-VKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYK 335
+ G C +++E G + ++ P Q V QVA G H+V++T +GY
Sbjct: 117 GNE-YGQCGEEP-SKDETGRPVRRDIVI---PKRCAQQLTVRQVAAGGTHSVVLTREGY- 170
Query: 336 LWSWGR 341
+W+WG+
Sbjct: 171 VWTWGQ 176
Score = 150 (57.9 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 41/136 (30%), Positives = 61/136 (44%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ G +LA+ G LW WGN T G + S+ P PV T+V +A G
Sbjct: 201 IAVGAFHNLALKEDGTLWAWGNNEYGQLGT--GDTQPRSY-PIPVQGLDDLTLVDIAAGG 257
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE--SRLRPKIIETFNQDSPWAVYE 194
H AL + GE Y WG +G+LG GD + S++ P+ + + + +
Sbjct: 258 WHSTALTNEGEVY--------GWGRGEHGRLGFGDNDKSSKMLPQKVNLLAGED---IIQ 306
Query: 195 VTCGSFHTALLTHRKR 210
V+CG H+ LT R
Sbjct: 307 VSCGGTHSVALTRDGR 322
Score = 148 (57.2 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 62/230 (26%), Positives = 103/230 (44%)
Query: 118 PSPVWDFHGHTV-VKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRE 173
P P D +V V+V G E+V L++ G + ED ++WG N GQLG GD +
Sbjct: 177 PWPPGDIKQISVPVRVQ-GLENV-RLIAVGAFHNLALKEDGTLWAWGNNEYGQLGTGDTQ 234
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P ++ + + ++ G +H+ LT+ E + +G GE+G+LG G
Sbjct: 235 PRSYPIPVQGLDD---LTLVDIAAGGWHSTALTN--------EGEVYGWGRGEHGRLGFG 283
Query: 234 TTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
S ++P++V L ++ V CG H+ ++ G ++S+G L +T
Sbjct: 284 DNDKSSKMLPQKVNLLAGED-IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTT 342
Query: 292 NEAGDAISPILI---SGNGPHGPKFQD----PVQVACGAAHTVLVTDDGY 334
+ + PI I G H + D VACG HT+ + + Y
Sbjct: 343 GQPLEL--PIHIPPPEGRFNHTDEEDDGKWIAKHVACGGRHTLAIVEWKY 390
Score = 103 (41.3 bits), Expect = 5.4e-16, Sum P(2) = 5.4e-16
Identities = 49/177 (27%), Positives = 67/177 (37%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF- 110
L +G + E S + P + SV G SLAI + G L+ WG T G
Sbjct: 18 LGLGTDEEKELASVVDALEPFNVRSVVGGSRNSLAICDDGKLFTWG---WNQRGTLGHPP 74
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG-- 168
+ TPS V +V+ A G H +A+ G Y +WG N GQ G
Sbjct: 75 ETKTESTPSLVKSLANVKIVQAAIGGWHCLAVDDQGRAY--------AWGGNEYGQCGEE 126
Query: 169 -LGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
D R +R I+ V +V G H+ +LT E WT+G
Sbjct: 127 PSKDETGRPVRRDIVIPKRCAQQLTVRQVAAGGTHSVVLTR--------EGYVWTWG 175
Score = 102 (41.0 bits), Expect = 1.9e-08, Sum P(2) = 1.9e-08
Identities = 33/118 (27%), Positives = 53/118 (44%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G + VP +V+ L + V L++V G FH + G +W+WG + L
Sbjct: 181 GDIKQISVPVRVQGL-ENVRLIAV--GAFHNLALKEDGTLWAWGNNE------YGQLGTG 231
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ PI + G V +A G H+ +T++G +++ WGRG G LG G
Sbjct: 232 DTQPRSYPIPVQGLDD-----LTLVDIAAGGWHSTALTNEG-EVYGWGRGEHGRLGFG 283
Score = 86 (35.3 bits), Expect = 8.4e-07, Sum P(2) = 8.4e-07
Identities = 16/34 (47%), Positives = 21/34 (61%)
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+A GA H + + +DG LW+WG G LGTG T
Sbjct: 201 IAVGAFHNLALKEDG-TLWAWGNNEYGQLGTGDT 233
>TAIR|locus:2076532 [details] [associations]
symbol:AT3G02300 "AT3G02300" species:3702 "Arabidopsis
thaliana" [GO:0008150 "biological_process" evidence=ND] [GO:0008536
"Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 IPI:IPI00534317
RefSeq:NP_186879.2 UniGene:At.41157 ProteinModelPortal:F4J609
SMR:F4J609 EnsemblPlants:AT3G02300.1 GeneID:821167
KEGG:ath:AT3G02300 OMA:LKELCEF Uniprot:F4J609
Length = 471
Score = 227 (85.0 bits), Expect = 6.2e-16, P = 6.2e-16
Identities = 82/252 (32%), Positives = 120/252 (47%)
Query: 124 FHGHTVVK-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKII 181
F T ++ V+CG+ HVVAL G + +WG N GQLG G E P++I
Sbjct: 162 FPATTAIRQVSCGTAHVVALSEEG--------LLQAWGYNEQGQLGRGVTCEGLQAPRVI 213
Query: 182 ET---FNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
F ++P V +++CG +HTA L+ D E W GLG GQLGH + Q
Sbjct: 214 NAYAKFLDEAPELVKIMQLSCGEYHTAALS------DAGEVYTW--GLGSMGQLGHVSLQ 265
Query: 237 SA---LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTR 291
S L+P +V L V + V CG HT +S G +++WG + G LGL P +
Sbjct: 266 SGDKELIPRRVVGLDG-VSMKEVACGGVHTCALSLEGALYAWGGGQAGQLGLGPQSGFFF 324
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ + S +L+ N P D VACG +HT++ +G ++ WG G K
Sbjct: 325 SVSNG--SEMLLR-NVPVLVIPTDVRLVACGHSHTLVYMREG-RICGWGYNSYGQAANEK 380
Query: 352 TIDFFAPAIVLW 363
+ + P+ V W
Sbjct: 381 SSYAWYPSPVDW 392
Score = 211 (79.3 bits), Expect = 3.9e-14, P = 3.9e-14
Identities = 80/293 (27%), Positives = 129/293 (44%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ G + A+ + G+L+ WG + G + V P V V V+CG+
Sbjct: 66 ISCGREHTAAVASDGSLFAWG---ANEYGQLGDGTEVGRKHPKKVKQLQSEFVKFVSCGA 122
Query: 137 EHVVALVSAGE---TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE-TFNQDSPWAV 192
A+ E T L + WG N L P++ F + A+
Sbjct: 123 FCTAAIAEPRENDGTLSTSRL--WVWGQNQGSNL----------PRLFSGAFPATT--AI 168
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVK------ 245
+V+CG+ H L+ +L++ W G E GQLG G T L P +
Sbjct: 169 RQVSCGTAHVVALSEE----GLLQA--W--GYNEQGQLGRGVTCEGLQAPRVINAYAKFL 220
Query: 246 -ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA-ISPILI 303
E P+ V ++ + CG +HT+ +S AG+V++WG+ +G + SL ++GD + P +
Sbjct: 221 DEAPELVKIMQLSCGEYHTAALSDAGEVYTWGLGS-MGQLGHVSL---QSGDKELIPRRV 276
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
G K +VACG HT ++ +G L++WG G++G LG G FF
Sbjct: 277 VGLDGVSMK-----EVACGGVHTCALSLEG-ALYAWGGGQAGQLGLGPQSGFF 323
Score = 195 (73.7 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 68/222 (30%), Positives = 100/222 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKII--ETFN----QDSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ G ++E LR PK + E F +S W +++CG HTA +
Sbjct: 23 YVWGYNQSGQTGRNEQEKLLRIPKQLPPELFGCPAGANSRWL--DISCGREHTAAVAS-- 78
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ + +G E GQLG GT P++VK+L Q ++ V CG F T+ ++
Sbjct: 79 ------DGSLFAWGANEYGQLGDGTEVGRKHPKKVKQL-QSEFVKFVSCGAFCTAAIAEP 131
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G L P L SG P + QV+
Sbjct: 132 RENDGTLSTSRLWVWGQNQGSNL----------------PRLFSGAFPATTAIR---QVS 172
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF-APAIV 361
CG AH V ++++G L +WG G LG G T + AP ++
Sbjct: 173 CGTAHVVALSEEGL-LQAWGYNEQGQLGRGVTCEGLQAPRVI 213
>FB|FBgn0031107 [details] [associations]
symbol:HERC2 "HECT and RLD domain containing protein 2
ortholog (H. sapiens)" species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=NAS] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;NAS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0020037 "heme binding" evidence=IEA] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
InterPro:IPR001199 InterPro:IPR009060 InterPro:IPR010606
Pfam:PF00173 Pfam:PF06701 PROSITE:PS50237 PROSITE:PS51416
SMART:SM00119 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0005814 GO:GO:0046872
EMBL:AE014298 GO:GO:0020037 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR015940 PROSITE:PS50030
InterPro:IPR008979 SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939
PROSITE:PS51284 InterPro:IPR000859 SUPFAM:SSF49854 GO:GO:0042787
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00700000104208 EMBL:AY113293 EMBL:AF189221
RefSeq:NP_608388.2 UniGene:Dm.3302 ProteinModelPortal:Q9VR91
SMR:Q9VR91 IntAct:Q9VR91 STRING:Q9VR91 PaxDb:Q9VR91
EnsemblMetazoa:FBtr0301344 GeneID:33035 KEGG:dme:Dmel_CG11734
UCSC:CG11734-RB CTD:8924 FlyBase:FBgn0031107 InParanoid:Q9VR91
KO:K10595 OMA:QLAFTRD OrthoDB:EOG48GTJ3 PhylomeDB:Q9VR91
GenomeRNAi:33035 NextBio:781623 Bgee:Q9VR91 GermOnline:CG11734
Uniprot:Q9VR91
Length = 4912
Score = 208 (78.3 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 56/205 (27%), Positives = 99/205 (48%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG +LA+ G ++ WG + G + + P V +
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGE---GEDGKLGHGNRTTLDKPRLVEALRAKKIRD 3129
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H A+ S GE Y +WG G+LG GD ++L+PK++ +
Sbjct: 3130 VACGSSHSAAISSQGELY--------TWGLGEYGRLGHGDNTTQLKPKLVTAL---AGRR 3178
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L +
Sbjct: 3179 VVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERLSG-I 3231
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+V ++CG + ++ AG+VW+WG
Sbjct: 3232 GVVQIECGAQFSLALTRAGEVWTWG 3256
Score = 189 (71.6 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 52/149 (34%), Positives = 77/149 (51%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V V G +H +AL + GE Y +WG +G+LG G+R S RPK++E N S
Sbjct: 4139 VAVNSGGKHCLALTTEGEVY--------AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMS- 4189
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS H+A +T +L T+G G G+LGHG ++ L P+ V+ L
Sbjct: 4190 --VADIACGSAHSAAIT---ASGHVL-----TWGKGRYGRLGHGDSEDQLRPKLVEALLG 4239
Query: 250 YVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
Y + + CG T ++ +VWSWG
Sbjct: 4240 Y-RAIDIACGSGDAQTLCITDDDNVWSWG 4267
Score = 185 (70.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 60/218 (27%), Positives = 97/218 (44%)
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
SA T G L +WG G+LG GD E +LRPK++E + ++ CGS
Sbjct: 4200 SAAITASGHVL---TWGKGRYGRLGHGDSEDQLRPKLVEAL---LGYRAIDIACGSGDAQ 4253
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L N W++G G+ G+LG G + +P +++ L + +V V+CG +
Sbjct: 4254 TLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-LGVVKVECGSQFS 4306
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ +G V++WG KG L P ++ G K + +A G+
Sbjct: 4307 VALTKSGAVYTWG--KG----DFHRLGHGSVDHVRRPKKVAAL--QGKKI---ISIATGS 4355
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H V +D G ++++WG G LG G P +V
Sbjct: 4356 LHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Score = 168 (64.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 64/216 (29%), Positives = 100/216 (46%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLRPKIIETFNQD-SPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ + TF+Q S + GS +++
Sbjct: 2982 QDLPCTVMVWGLNDKEQLG-GLKGSKVK---VPTFSQTISRLRPIHIAGGSKSLFIVSQ- 3036
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3037 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 3090 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 3136
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 3137 SAAISSQG-ELYTWGLGEYGRLGHGDNTTQLKPKLV 3171
Score = 161 (61.7 bits), Expect = 2.6e-07, P = 2.6e-07
Identities = 53/169 (31%), Positives = 76/169 (44%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4277 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGK---GDFHRLGHGSVDH 4333
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 4334 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 4385
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT-AL----LTHRKRP--NDMLE 216
RP+++ + +VTCGS HT AL L+ R RP N LE
Sbjct: 4386 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRPLPNPPLE 4431
Score = 161 (61.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 57/225 (25%), Positives = 105/225 (46%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++ ++ G++ +WG +
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVYCGCSYSAAITCGGNLLTWG--R 694
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G A L + D P L+ H D V + G AH++ +T +G +++W
Sbjct: 695 GT----YARLGHGNSDDRSLPTLVVALSDH--MVVD-VALGSGDAHSLALTSEGL-VFAW 746
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTE------EFK-----QDELNTGG----LDDEI 384
G G G LG G P +V P + +F + +L T G L ++
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL 806
Query: 385 KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFG 429
+ ++G +L S+++ +++ +SV A G +FG
Sbjct: 807 VERSVQGCSV--PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Score = 152 (58.6 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 41/148 (27%), Positives = 66/148 (44%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G + + + + I + ++ G SLA+ AG +W WG GG V
Sbjct: 3214 GGSEGSDTPHEIERLSGIGVVQIECGAQFSLALTRAGEVWTWGKGDYYRLG-HGGDQHVR 3272
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P P+ G V+ VA G+ H +A+ AG+ Y +WG N++GQ G G+
Sbjct: 3273 K--PQPIGGLRGRRVIHVAVGALHCLAVTDAGQVY--------AWGDNDHGQQGSGNTFV 3322
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+P ++ D+ + V V CGS H+
Sbjct: 3323 NKKPALV--IGLDAVF-VNRVACGSSHS 3347
Score = 150 (57.9 bits), Expect = 1.0e-11, Sum P(2) = 1.0e-11
Identities = 38/128 (29%), Positives = 61/128 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G +V
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGE---GEDGKLGHGNRMSYDRPKLVEHLNGMSVAD 4192
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 4193 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEAL---LGYR 4241
Query: 192 VYEVTCGS 199
++ CGS
Sbjct: 4242 AIDIACGS 4249
Score = 148 (57.2 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 70/274 (25%), Positives = 117/274 (42%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED +SWG + G+LG G E P IE S V ++ CG+ + LT R
Sbjct: 3196 EDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL---SGIGVVQIECGAQFSLALT---RA 3249
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
++ WT+G G+ +LGHG Q P+ + L + ++ V G H V+ AG
Sbjct: 3250 GEV-----WTWGKGDYYRLGHGGDQHVRKPQPIGGL-RGRRVIHVAVGALHCLAVTDAGQ 3303
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V++WG + G + + N+ P L+ G F + +VACG++H++
Sbjct: 3304 VYAWG-DNDHGQQGSGNTFVNK-----KPALVIGLDA---VFVN--RVACGSSHSIAW-- 3350
Query: 332 DGYKLWSWGRGRSGVLGTGKTID-FFAPAIVLWPPLT-EEFKQDE--LNTGGLDDEIKTK 387
G S + G + T D ++ ++ T + KQ+ LN L + +
Sbjct: 3351 -GLPNASSDEEKRGPVPFSSTRDPLGGSSLGIYEAETMQTLKQEAKPLNQSSLSESLA-- 3407
Query: 388 DLEGAEERDEKLSSAMEEMKLLQSKLSVMERYAS 421
LE R L + M +LQ++ ++ S
Sbjct: 3408 -LETPAARQAALGHVLRAMSILQARQLIVAALTS 3440
Score = 147 (56.8 bits), Expect = 7.0e-16, Sum P(2) = 7.0e-16
Identities = 48/143 (33%), Positives = 74/143 (51%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGM-EK 279
G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V++WG E
Sbjct: 4107 GYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVYAWGEGED 4165
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LG S R P L+ +G D +ACG+AH+ +T G+ L +
Sbjct: 4166 GKLGHGNRMSYDR--------PKLVEHL--NGMSVAD---IACGSAHSAAITASGHVL-T 4211
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+GR G LG G + D P +V
Sbjct: 4212 WGKGRYGRLGHGDSEDQLRPKLV 4234
Score = 135 (52.6 bits), Expect = 1.2e-05, Sum P(3) = 1.2e-05
Identities = 57/207 (27%), Positives = 98/207 (47%)
Query: 136 SEHVVALVS--AGETYK----GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
S+H+V V+ +G+ + E LV ++WG + G+LG G+ L+P ++E+ +
Sbjct: 718 SDHMVVDVALGSGDAHSLALTSEGLV-FAWGDGDYGKLGNGNCNGSLQPILVESLPR--- 773
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V GS + L+ + ++ C LG QL + Q VP V L Q
Sbjct: 774 --VQRVFAGSQFSVALSSEGQLYTWGKATC----LGH--QLVERSVQGCSVPRLVSSL-Q 824
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V V + H +SS+G+V+ WG +CP AS++ +PIL+S
Sbjct: 825 HKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP-ASVSSEPL--LRTPILVSL---- 877
Query: 310 GPKFQDPVQ-VACGAAHTVLVTDDGYK 335
P F P +AC +A +++ T ++
Sbjct: 878 -PTF--PASGIACTSAQSLVWTQSSHQ 901
Score = 130 (50.8 bits), Expect = 3.9e-05, Sum P(3) = 3.9e-05
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YSWG + +LG GD +R P I Q +VY CG ++A +T ++L
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY---CGCSYSAAITCG---GNLL- 690
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSW 275
T+G G +LGHG + +P V L ++ + V++ G H+ ++S G V++W
Sbjct: 691 ----TWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 746
Query: 276 GM----EKGLGLCPNASL 289
G + G G C N SL
Sbjct: 747 GDGDYGKLGNGNC-NGSL 763
Score = 109 (43.4 bits), Expect = 6.1e-12, Sum P(2) = 6.1e-12
Identities = 32/112 (28%), Positives = 58/112 (51%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P++V L Q ++S+ G H S +G+V++WG +
Sbjct: 4316 YTWGKGDFHRLGHGSVDHVRRPKKVAAL-QGKKIISIATGSLHCVACSDSGEVYTWG-DN 4373
Query: 280 GLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVT 330
G + ++T + P L++ G H V+V CG+AHT+ ++
Sbjct: 4374 DEGQLGDGTVTAIQR-----PRLVAALQGKH------IVKVTCGSAHTLALS 4414
Score = 104 (41.7 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 37/123 (30%), Positives = 61/123 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4052 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4103
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4104 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Query: 274 SWG 276
+WG
Sbjct: 4159 AWG 4161
Score = 88 (36.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 45/132 (34%), Positives = 58/132 (43%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
SV G S AI G L WG + G S S P+ V H VV VA G
Sbjct: 672 SVYCGCSYSAAITCGGNLLTWGRGTY--ARLGHGNSDDRSL-PTLVVALSDHMVVDVALG 728
Query: 136 S--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
S H +AL S G LV ++WG + G+LG G+ L+P ++E+ + V
Sbjct: 729 SGDAHSLALTSEG-------LV-FAWGDGDYGKLGNGNCNGSLQPILVESLPR-----VQ 775
Query: 194 EVTCGS-FHTAL 204
V GS F AL
Sbjct: 776 RVFAGSQFSVAL 787
Score = 86 (35.3 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 36/139 (25%), Positives = 53/139 (38%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H + + + G S AI +G + WG G P V G+
Sbjct: 4184 HLNGMSVADIACGSAHSAAITASGHVLTWGKGRY---GRLGHGDSEDQLRPKLVEALLGY 4240
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +ACGS L + D V +SWG + G+LG G + P IE+
Sbjct: 4241 RAIDIACGSGDAQTLCITDD-----DNV-WSWGDGDYGKLGRGGSDGCKLPYKIESL--- 4291
Query: 188 SPWAVYEVTCGSFHTALLT 206
+ V +V CGS + LT
Sbjct: 4292 AGLGVVKVECGSQFSVALT 4310
Score = 81 (33.6 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 20/69 (28%), Positives = 34/69 (49%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V G + LA+ +AG ++ WG+ D +G + + P+ V V +V
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGSGNTFVNKKPALVIGLDAVFVNRV 3340
Query: 133 ACGSEHVVA 141
ACGS H +A
Sbjct: 3341 ACGSSHSIA 3349
Score = 80 (33.2 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 27/96 (28%), Positives = 41/96 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP-LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ V AG S+A+ + G L+ WG L E S+ P V +V
Sbjct: 773 RVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQLVER--SVQGCSVPRLVSSLQHKRIVD 830
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
VA H +AL S+GE + WG N++ Q+
Sbjct: 831 VAVSVAHCLALSSSGEVF--------GWGRNDSQQI 858
Score = 76 (31.8 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+A G VT DG KL++ G G G LG G + + P ++ L F K+
Sbjct: 4084 PVQLAGGEQSLFAVTPDG-KLFATGYGSGGRLGVGGSDSWAIPTLL--GSLQHVFVKKVA 4140
Query: 375 LNTGG 379
+N+GG
Sbjct: 4141 VNSGG 4145
Score = 72 (30.4 bits), Expect = 1.4e-07, Sum P(2) = 1.4e-07
Identities = 32/128 (25%), Positives = 50/128 (39%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
G LAID+ + WG + G + P+ + H V V CG +
Sbjct: 625 GRHFLAIDSNHNAYSWGT---GEDHRLGHGDTHARAVPTKIAALEQHCVQSVYCGCSYSA 681
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS- 199
A+ G +L+ +WG +LG G+ + R P ++ S V +V GS
Sbjct: 682 AITCGG------NLL--TWGRGTYARLGHGNSDDRSLPTLVVAL---SDHMVVDVALGSG 730
Query: 200 -FHTALLT 206
H+ LT
Sbjct: 731 DAHSLALT 738
Score = 61 (26.5 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 23/78 (29%), Positives = 33/78 (42%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G SLA+ + G ++ WG+ D G + S P V V +V GS+
Sbjct: 729 SGDAHSLALTSEGLVFAWGD---GDYGKLGNGNCNGSLQPILVESLP--RVQRVFAGSQF 783
Query: 139 VVALVSAGETYKGEDLVC 156
VAL S G+ Y C
Sbjct: 784 SVALSSEGQLYTWGKATC 801
Score = 39 (18.8 bits), Expect = 1.7e-13, Sum P(3) = 1.7e-13
Identities = 7/12 (58%), Positives = 9/12 (75%)
Query: 266 VSSAGDV--WSW 275
+SS GDV W+W
Sbjct: 3906 ISSTGDVHKWAW 3917
Score = 39 (18.8 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/52 (23%), Positives = 21/52 (40%)
Query: 63 DSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
DS T K + + +S A D + W+W P + + S++S
Sbjct: 167 DSDTAIKKLTTQAAAQQAAHLSQATDMVLSGWLWSQPPSQQARLDCQRSMIS 218
>ZFIN|ZDB-GENE-070718-6 [details] [associations]
symbol:herc2 "hect domain and RLD 2" species:7955
"Danio rerio" [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0016567 "protein
ubiquitination" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0020037 "heme binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00632
InterPro:IPR000433 InterPro:IPR000569 InterPro:IPR001199
InterPro:IPR009060 InterPro:IPR010606 Pfam:PF00173 Pfam:PF00569
Pfam:PF06701 PROSITE:PS01357 PROSITE:PS50135 PROSITE:PS50237
PROSITE:PS50255 PROSITE:PS51416 SMART:SM00119 SMART:SM00291
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-070718-6
GO:GO:0046872 GO:GO:0008270 GO:GO:0020037 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.10.120.10 SUPFAM:SSF55856 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR004939 Pfam:PF03256 PROSITE:PS51284
SUPFAM:SSF46934 Gene3D:2.30.30.30 InterPro:IPR021097
InterPro:IPR014722 Pfam:PF11515 SUPFAM:SSF56204
GeneTree:ENSGT00700000104208 InterPro:IPR006624 SMART:SM00706
EMBL:CABZ01006344 EMBL:CABZ01006345 EMBL:CABZ01006346 EMBL:FP085470
IPI:IPI00495163 Ensembl:ENSDART00000110770 Uniprot:E7EYK8
Length = 4832
Score = 223 (83.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 59/205 (28%), Positives = 100/205 (48%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3043 VKKVAVHSGGRHAMALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 3099
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y SWG G+LG GD ++LRPK+++
Sbjct: 3100 IACGSSHSAAITSSGELY--------SWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR--- 3148
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L D E M +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3149 VVQVACGSRDAQTLAL----TD--EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG 3202
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+ ++CG + ++ +G VW+WG
Sbjct: 3203 -VCQIECGAQFSLALTKSGVVWTWG 3226
Score = 218 (81.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 61/207 (29%), Positives = 97/207 (46%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ +V +GG LA+ + G L+ WG D G + P + G VV
Sbjct: 4037 IRKVAVNSGGKHCLALSSEGELYSWGEAE--DGKLGHG-NRSPCDRPRVIESLRGVEVVD 4093
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + ++GE Y +WG G+LG GD E +L+PK++E
Sbjct: 4094 IAAGGAHSACITASGELY--------TWGKGRYGRLGHGDSEDQLKPKLVEALQGHR--- 4142
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + M W++G G+ G+LG G + VP ++ L
Sbjct: 4143 VIDVACGSGDAQTLCLTD--------DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4194
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +V V+CG + ++ +G V++WG
Sbjct: 4195 -LGVVKVECGSQFSVALTKSGAVYTWG 4220
Score = 169 (64.5 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 64/208 (30%), Positives = 93/208 (44%)
Query: 129 VVKVACGSEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+VKV G H V V+ G E +V +SWG + G+LG G E P+ IE
Sbjct: 3140 LVKVLLG--HRVVQVACGSRDAQTLALTDEGMV-FSWGDGDFGKLGRGGSEGCNIPQNIE 3196
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N V ++ CG+ + LT + WT+G G+ +LGHGT P+
Sbjct: 3197 RLNGQG---VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGTDVHVRKPQ 3245
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L + +V V G H V+ G V++WG + G N + T N P L
Sbjct: 3246 MVEGL-RGKKIVHVAVGALHCLAVTETGQVFAWG-DNDHGQQGNGTTTVNR-----KPTL 3298
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ G G K +VACG++H+V T
Sbjct: 3299 VQGL--EGQKI---TRVACGSSHSVAWT 3321
Score = 164 (62.8 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 60/201 (29%), Positives = 102/201 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPND 213
Y+ G NG+LGLG + P+ I S + V +V G H LT
Sbjct: 3010 YACGEATNGRLGLGLSSGTIPIPRQISAL---SNYVVKKVAVHSGGRHAMALT------- 3059
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
++ +++G G++G+LGH + + P ++ L + + + CG H++ ++S+G+++
Sbjct: 3060 -VDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELY 3117
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLV 329
SWG+ E G LG N + R + + +L+ G + VQVACG+ A T+ +
Sbjct: 3118 SWGLGEYGRLGHGDNTTQLRPK----LVKVLL------GHRV---VQVACGSRDAQTLAL 3164
Query: 330 TDDGYKLWSWGRGRSGVLGTG 350
TD+G ++SWG G G LG G
Sbjct: 3165 TDEGM-VFSWGDGDFGKLGRG 3184
Score = 156 (60.0 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 42/137 (30%), Positives = 71/137 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G E+G+LGHG P ++ L + V +V + G H++ ++++G++++W
Sbjct: 4055 EGELYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGVEVVDIAAGGAHSACITASGELYTW 4113
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G KG L ++ D + P L+ H + VACG+ A T+ +TDD
Sbjct: 4114 G--KGR----YGRLGHGDSEDQLKPKLVEALQGHRV-----IDVACGSGDAQTLCLTDDD 4162
Query: 334 YKLWSWGRGRSGVLGTG 350
+WSWG G G LG G
Sbjct: 4163 M-VWSWGDGDYGKLGRG 4178
Score = 154 (59.3 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 48/168 (28%), Positives = 76/168 (45%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
++ P V ++K+A +H +AL GE + SWG + G+LG GD
Sbjct: 470 TTLAPMLVHALTSRKIMKLAAHPDGQHYLALSVNGEVF--------SWGCGDGGRLGHGD 521
Query: 172 RESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
P +I F+ + V + CGS ++A +T + T+G G G+L
Sbjct: 522 TTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAIT--------ADGELHTWGRGNYGRL 573
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG 276
GHG+++ P V L + + ++ V CG T V+ G VWSWG
Sbjct: 574 GHGSSEDQTTPMLVTAL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG 620
Score = 152 (58.6 bits), Expect = 6.4e-14, Sum P(2) = 6.4e-14
Identities = 43/141 (30%), Positives = 71/141 (50%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGMEKG 280
G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+++SWG +
Sbjct: 4008 GYGAGGRLGIGGTESVSTPTLLESI-QHVFIRKVAVNSGGKHCLALSSEGELYSWGEAE- 4065
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+ L P +I + + V +A G AH+ +T G +L++WG
Sbjct: 4066 -----DGKLGHGNRSPCDRPRVIESL-----RGVEVVDIAAGGAHSACITASG-ELYTWG 4114
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
+GR G LG G + D P +V
Sbjct: 4115 KGRYGRLGHGDSEDQLKPKLV 4135
Score = 150 (57.9 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 44/147 (29%), Positives = 75/147 (51%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL---PQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P + P +V + CG +++ +++ G++ +WG
Sbjct: 507 FSWGCGDGGRLGHGDTTYLEEPTMISVFSGRPVGKQVVHIACGSTYSAAITADGELHTWG 566
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
+G L + D +P+L++ G K D VACG+ A T+ VT++G
Sbjct: 567 --RG----NYGRLGHGSSEDQTTPMLVTAL--KGLKVID---VACGSGDAQTLAVTENG- 614
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P +V
Sbjct: 615 QVWSWGDGDYGKLGRGGSDGCKTPKLV 641
Score = 145 (56.1 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 38/120 (31%), Positives = 60/120 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG + G+LG G + PK++E QD + +V CGS + LT +
Sbjct: 617 WSWGDGDYGKLGRGGSDGCKTPKLVEKL-QDLD--IVKVCCGSQFSVALTK--------D 665
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G G+N +LGHGT + P+ + L Q +V + G H ++ G+V SWG
Sbjct: 666 GQVYTWGKGDNQRLGHGTDEHVRYPKLLDSL-QGKRVVDIAVGSTHCLALTEEGEVHSWG 724
Score = 145 (56.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 44/158 (27%), Positives = 64/158 (40%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4178 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 4234
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y +WG N+ GQLG G +
Sbjct: 4235 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNA 4286
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
RP+++ + V CGS HT + K N
Sbjct: 4287 IQRPRLVAALQGKK---INRVACGSAHTLAWSTSKPTN 4321
Score = 142 (55.0 bits), Expect = 7.6e-13, Sum P(2) = 7.6e-13
Identities = 42/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ M W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G V++W
Sbjct: 4161 DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG-LGVVKVECGSQFSVALTKSGAVYTW 4219
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P + G G K + +A G+ H V T+DG +
Sbjct: 4220 G--KG----DYHRLGHGSDDHVRRPRQVQGL--QGKKV---IAIATGSLHCVCCTEDG-E 4267
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G LG G T P +V
Sbjct: 4268 VYTWGDNDEGQLGDGTTNAIQRPRLV 4293
Score = 138 (53.6 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 44/148 (29%), Positives = 67/148 (45%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVW 273
E + G NG+LG G + + +P Q+ L YV V+V G H ++ G V+
Sbjct: 3006 EGKVYACGEATNGRLGLGLSSGTIPIPRQISALSNYVVKKVAVHSGGRHAMALTVDGKVF 3065
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWG +G + L + P LI + +D +ACG++H+ +T G
Sbjct: 3066 SWG--EG----DDGKLGHFSRMNCDKPRLIEALKTK--RIRD---IACGSSHSAAITSSG 3114
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L+SWG G G LG G P +V
Sbjct: 3115 -ELYSWGLGEYGRLGHGDNTTQLRPKLV 3141
Score = 135 (52.6 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 47/145 (32%), Positives = 69/145 (47%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGM 277
+++GLGE G+LGHG + L P+ VK L + +V V CG T ++ G V+SWG
Sbjct: 3117 YSWGLGEYGRLGHGDNTTQLRPKLVKVLLGH-RVVQVACGSRDAQTLALTDEGMVFSWG- 3174
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ G L R + P I NG Q Q+ CGA ++ +T G +
Sbjct: 3175 DGDFG-----KLGRGGSEGCNIPQNIERLNG------QGVCQIECGAQFSLALTKSGV-V 3222
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
W+WG+G LG G + P +V
Sbjct: 3223 WTWGKGDYFRLGHGTDVHVRKPQMV 3247
Score = 135 (52.6 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 41/146 (28%), Positives = 69/146 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E M +++G G+ G+LG G ++ +P+ ++ L + ++CG + ++ +G VW+W
Sbjct: 3167 EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQG-VCQIECGAQFSLALTKSGVVWTW 3225
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G KG L P ++ G G K V VA GA H + VT+ G +
Sbjct: 3226 G--KG----DYFRLGHGTDVHVRKPQMVEGL--RGKKI---VHVAVGALHCLAVTETG-Q 3273
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G G G T P +V
Sbjct: 3274 VFAWGDNDHGQQGNGTTTVNRKPTLV 3299
Score = 128 (50.1 bits), Expect = 2.4e-14, Sum P(2) = 2.4e-14
Identities = 44/152 (28%), Positives = 63/152 (41%)
Query: 72 IKICSVKAGG--MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+K+ V G +LA+ G +W WG+ D G TP V +
Sbjct: 593 LKVIDVACGSGDAQTLAVTENGQVWSWGD---GDYGKLGRGGSDGCKTPKLVEKLQDLDI 649
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VKV CGS+ VAL G+ Y +WG +N +LG G E PK++++
Sbjct: 650 VKVCCGSQFSVALTKDGQVY--------TWGKGDNQRLGHGTDEHVRYPKLLDSLQGKR- 700
Query: 190 WAVYEVTCGSFHTALLT-----HRKRPNDMLE 216
V ++ GS H LT H ND L+
Sbjct: 701 --VVDIAVGSTHCLALTEEGEVHSWGSNDKLQ 730
Score = 98 (39.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 34/109 (31%), Positives = 55/109 (50%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ +LGHG+ P QV+ L Q ++++ G H + G+V++WG +
Sbjct: 4217 YTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWG-DN 4274
Query: 280 GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTV 327
G + T N AI P L++ G K +VACG+AHT+
Sbjct: 4275 DEGQLGDG--TTN----AIQRPRLVAAL--QGKKIN---RVACGSAHTL 4312
Score = 96 (38.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 23/76 (30%), Positives = 35/76 (46%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3254 KIVHVAVGALHCLAVTETGQVFAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3310
Query: 133 ACGSEHVVALVSAGET 148
ACGS H VA + T
Sbjct: 3311 ACGSSHSVAWTTVDVT 3326
Score = 95 (38.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 32/113 (28%), Positives = 48/113 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG + +LG G + RP+ ++ V + GS H T +
Sbjct: 4217 YTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATGSLHCVCCTE--------D 4265
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G + GQLG GTT + P V L Q + V CG HT S++
Sbjct: 4266 GEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVACGSAHTLAWSTS 4317
Score = 68 (29.0 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-KQDE 374
PVQ+ G VT DG KL++ G G G LG G T P ++ + F ++
Sbjct: 3985 PVQLIGGEQTLFAVTADG-KLYATGYGAGGRLGIGGTESVSTPTLL--ESIQHVFIRKVA 4041
Query: 375 LNTGG 379
+N+GG
Sbjct: 4042 VNSGG 4046
Score = 44 (20.5 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 7/19 (36%), Positives = 13/19 (68%)
Query: 27 LNCCMDGQLGFSGSNSLVP 45
+ C +D +L F+ + S+VP
Sbjct: 3731 VTCLLDFRLNFASNRSIVP 3749
Score = 40 (19.1 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 300 PILISGNGP-HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGR 341
PI+ G H P F+ V +AC T+ + +K W+W R
Sbjct: 3831 PIVRGGKQLLHSPFFKVLVALACDLELDTLPCCAETHK-WAWFR 3873
Score = 37 (18.1 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 11/44 (25%), Positives = 18/44 (40%)
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
SL + G + ++SG G P+ D + C + TD
Sbjct: 3556 SLRSGDKGKEVLSAVLSGMGTACPQVADMLLELCVTELEDVATD 3599
Score = 37 (18.1 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 9/50 (18%), Positives = 23/50 (46%)
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
GL+D+ + L+G++ + S + + ++Q +A G ++
Sbjct: 2961 GLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTAEGKVY 3010
>TAIR|locus:2205794 [details] [associations]
symbol:AT1G27060 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 EMBL:BT030023 IPI:IPI00535833 RefSeq:NP_174026.1
UniGene:At.41142 UniGene:At.50938 ProteinModelPortal:A2RVN2
SMR:A2RVN2 DNASU:839595 EnsemblPlants:AT1G27060.1 GeneID:839595
KEGG:ath:AT1G27060 TAIR:At1g27060 HOGENOM:HOG000236375
InParanoid:A2RVN2 OMA:GYIYAWG PhylomeDB:A2RVN2
ProtClustDB:CLSN2682864 Genevestigator:A2RVN2 Uniprot:A2RVN2
Length = 386
Score = 160 (61.4 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 58/191 (30%), Positives = 91/191 (47%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +ACG HV+AL S G+ + +WG ++GQLG GD + PK++ F+ D
Sbjct: 49 SISMLACGGAHVIALTSGGKVF--------TWGRGSSGQLGHGDILNITLPKLVSFFD-D 99
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQLGHGTTQSALVPEQVKE 246
S + + G H+ ++ +S C +T G G GQLGHG T S P +V
Sbjct: 100 S--VITQAAAGWSHSGFVS---------DSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSH 148
Query: 247 LPQ-YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRN----EAG-DAI 298
V +V+ CG+ H+ V+ + V +G K G LG + + N +G +
Sbjct: 149 FNNDSVKMVA--CGMRHSLVLFAGNQVCGFGSGKRGQLGFSSDRIKSVNLPCVVSGLKDV 206
Query: 299 SPILISGNGPH 309
+ IS NG H
Sbjct: 207 EVVRISANGDH 217
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 46/148 (31%), Positives = 69/148 (46%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W++G G +GQLG Q L+P Q+ L + + CG H ++S G V++W
Sbjct: 14 EEQVWSWGAGTDGQLGTTKLQDELLP-QLLSLTSLPSISMLACGGAHVIALTSGGKVFTW 72
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDG 333
G +G + L + + P L+S F D V Q A G +H+ V+D G
Sbjct: 73 G--RG----SSGQLGHGDILNITLPKLVSF-------FDDSVITQAAAGWSHSGFVSDSG 119
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++ G G G LG G T+ PA V
Sbjct: 120 C-IFTCGNGSFGQLGHGDTLSLSTPAKV 146
Score = 129 (50.5 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 38/133 (28%), Positives = 62/133 (46%)
Query: 146 GETY--KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
GET + E+ +SWGA +GQLG + L P+++ + S + + CG H
Sbjct: 5 GETQADEEEEEQVWSWGAGTDGQLGTTKLQDELLPQLLSLTSLPS---ISMLACGGAHVI 61
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
LT + +T+G G +GQLGHG + +P+ V V + G H+
Sbjct: 62 ALTSGGK--------VFTWGRGSSGQLGHGDILNITLPKLVSFFDDSV-ITQAAAGWSHS 112
Query: 264 SVVSSAGDVWSWG 276
VS +G +++ G
Sbjct: 113 GFVSDSGCIFTCG 125
Score = 127 (49.8 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 45/145 (31%), Positives = 69/145 (47%)
Query: 137 EHVVALVSAGETYKG--EDLVC-YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
+ V+ +AG ++ G D C ++ G + GQLG GD S P + FN DS V
Sbjct: 99 DSVITQAAAGWSHSGFVSDSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDS---VK 155
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYV 251
V CG H+ +L + +C FG G+ GQLG + + S +P V L V
Sbjct: 156 MVACGMRHSLVLFAGNQ-------VCG-FGSGKRGQLGFSSDRIKSVNLPCVVSGLKD-V 206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+V + H++ +S+ G +SWG
Sbjct: 207 EVVRISANGDHSAAISADGQFFSWG 231
Score = 96 (38.9 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 40/134 (29%), Positives = 57/134 (42%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKV 132
I + GG +A+ + G ++ WG SS + G + + T P V F + +
Sbjct: 50 ISMLACGGAHVIALTSGGKVFTWGR----GSSGQLGHGDILNITLPKLVSFFDDSVITQA 105
Query: 133 ACGSEHVVALVSAGETYKGEDLVC-YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
A G H VS D C ++ G + GQLG GD S P + FN DS
Sbjct: 106 AAGWSHS-GFVS--------DSGCIFTCGNGSFGQLGHGDTLSLSTPAKVSHFNNDS--- 153
Query: 192 VYEVTCGSFHTALL 205
V V CG H+ +L
Sbjct: 154 VKMVACGMRHSLVL 167
Score = 95 (38.5 bits), Expect = 3.6e-14, Sum P(2) = 3.6e-14
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 376
+Q+A GA H+ VT++G ++ +WG G G LG G T D +P +V + K+ ++
Sbjct: 308 MQIAAGAEHSAAVTENG-EVKTWGWGEHGQLGLGNTNDQTSPELVSLGSIDLRTKEIKVY 366
Query: 377 TG-GLDDEIKTK 387
G G +K K
Sbjct: 367 CGSGFTYAVKRK 378
Score = 77 (32.2 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 29/100 (29%), Positives = 43/100 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I AG S + ++G ++ GN G +S TP+ V F+ +V VA
Sbjct: 102 ITQAAAGWSHSGFVSDSGCIFTCGNGSFGQL---GHGDTLSLSTPAKVSHFNNDSVKMVA 158
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DR 172
CG H + L + + VC +G+ GQLG DR
Sbjct: 159 CGMRHSLVLFAGNQ-------VC-GFGSGKRGQLGFSSDR 190
Score = 69 (29.3 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 37/146 (25%), Positives = 59/146 (40%)
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
SP + EV G H LLT ++ + G N Q Q +++
Sbjct: 248 SPLSFREVAVGWNHALLLT--------VDGEVFKLGSTLNKQPEKQQLQIDSSEALFEKV 299
Query: 248 PQY--VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
P + V ++ + G H++ V+ G+V W WG LGL D SP L+
Sbjct: 300 PDFDGVKVMQIAAGAEHSAAVTENGEVKTWGWGEHGQLGL--------GNTNDQTSPELV 351
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLV 329
S G + ++ ++V CG+ T V
Sbjct: 352 S-LGSIDLRTKE-IKVYCGSGFTYAV 375
>ZFIN|ZDB-GENE-090311-7 [details] [associations]
symbol:si:ch211-281g13.5 "si:ch211-281g13.5"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-7 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00899041
RefSeq:NP_001139103.1 UniGene:Dr.155114 Ensembl:ENSDART00000113315
GeneID:100148091 OMA:TLAWFPS NextBio:20791722 Uniprot:B8A4S7
Length = 992
Score = 180 (68.4 bits), Expect = 3.6e-10, P = 3.6e-10
Identities = 62/216 (28%), Positives = 98/216 (45%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVV 130
++ + G S+A+ N G L++WG ++ + G + T SP + V
Sbjct: 116 QVIQIACGDQHSMALSNDGQLFVWGE----NTHGQLGLRKEQAGTQSPQHLQSLCEIPVA 171
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++ G H L +G V + WG+N+ GQLGLGD + R P I+++
Sbjct: 172 QISAGGNHSFVLSLSG--------VVFGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK-- 221
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
++CG HTA L+ +TFG G GQLGH + + P + EL +
Sbjct: 222 -TVSISCGGEHTATLSKG--------GTVFTFGSGGFGQLGHNSLKDEHHPRLIAEL--W 270
Query: 251 VYLVS-VDCGLFHTSVVSSAGD-VWSWG--MEKGLG 282
VS V CG HT V + ++S+G M+ LG
Sbjct: 271 GSKVSQVTCGRHHTLVFEESSKLIYSFGCGMQGQLG 306
Score = 178 (67.7 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 57/159 (35%), Positives = 75/159 (47%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG G T+ VP VK L VS+ CG HT+ +S G V+++G
Sbjct: 190 FGWGSNSAGQLGLGDTKDRFVPTIVKSLCGKK-TVSISCGGEHTATLSKGGTVFTFG-SG 247
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N D P LI+ G K QV CG HT++ + ++S+
Sbjct: 248 GFG-----QLGHNSLKDEHHPRLIAELW--GSKVS---QVTCGRHHTLVFEESSKLIYSF 297
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 378
G G G LG G+ + P VL P EF ++L TG
Sbjct: 298 GCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLITG 336
Score = 126 (49.4 bits), Expect = 0.00027, P = 0.00027
Identities = 47/179 (26%), Positives = 73/179 (40%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS-FTPSPVWDFHGHTVV 130
I + + AGG S + +G ++ WG+ +S+ + G F P+ V G V
Sbjct: 168 IPVAQISAGGNHSFVLSLSGVVFGWGS----NSAGQLGLGDTKDRFVPTIVKSLCGKKTV 223
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CG EH L S G T +++G+ GQLG + P++I W
Sbjct: 224 SISCGGEHTATL-SKGGTV-------FTFGSGGFGQLGHNSLKDEHHPRLIAEL-----W 270
Query: 191 A--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVPEQVKE 246
V +VTCG HT L + + C G LG Q+ L+P + E
Sbjct: 271 GSKVSQVTCGRHHT--LVFEESSKLIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTE 327
Score = 88 (36.0 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 23/88 (26%), Positives = 47/88 (53%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-P 178
P+ V+++ACG +H +AL + G+ + WG N +GQLGL ++ + P
Sbjct: 108 PLKSLENRQVIQIACGDQHSMALSNDGQLFV--------WGENTHGQLGLRKEQAGTQSP 159
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ +++ + P V +++ G H+ +L+
Sbjct: 160 QHLQSLCE-IP--VAQISAGGNHSFVLS 184
>UNIPROTKB|Q9UII4 [details] [associations]
symbol:HERC5 "E3 ISG15--protein ligase HERC5" species:9606
"Homo sapiens" [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0005737
"cytoplasm" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0032020 "ISG15-protein conjugation" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042296 "ISG15
ligase activity" evidence=IDA] [GO:0050688 "regulation of defense
response to virus" evidence=IDA] [GO:0000079 "regulation of
cyclin-dependent protein serine/threonine kinase activity"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS] [GO:0032480
"negative regulation of type I interferon production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=TAS] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 EMBL:AY337518
EMBL:AB027289 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0048471 Reactome:REACT_6900 GO:GO:0000079
GO:GO:0045087 GO:GO:0019221 GO:GO:0051607 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
GO:GO:0032480 GO:GO:0050688 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 EMBL:AC083829 EMBL:BC140716
IPI:IPI00008821 RefSeq:NP_057407.2 UniGene:Hs.26663
ProteinModelPortal:Q9UII4 SMR:Q9UII4 DIP:DIP-44200N IntAct:Q9UII4
STRING:Q9UII4 PhosphoSite:Q9UII4 DMDM:296434523 PaxDb:Q9UII4
PRIDE:Q9UII4 Ensembl:ENST00000264350 GeneID:51191 KEGG:hsa:51191
UCSC:uc003hrt.3 CTD:51191 GeneCards:GC04P089378 H-InvDB:HIX0200636
HGNC:HGNC:24368 HPA:HPA043929 MIM:608242 neXtProt:NX_Q9UII4
PharmGKB:PA134973940 InParanoid:Q9UII4 OMA:KDWITNT
OrthoDB:EOG4N30N6 PhylomeDB:Q9UII4 GenomeRNAi:51191 NextBio:54182
ArrayExpress:Q9UII4 Bgee:Q9UII4 CleanEx:HS_HERC5
Genevestigator:Q9UII4 GermOnline:ENSG00000138646 GO:GO:0042296
GO:GO:0032020 Uniprot:Q9UII4
Length = 1024
Score = 216 (81.1 bits), Expect = 4.4e-14, P = 4.4e-14
Identities = 62/158 (39%), Positives = 85/158 (53%)
Query: 140 VALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
+A +SAGE + + YSWG N GQLGLG ES+ P +IE + V V
Sbjct: 193 LAQISAGEAHSMALSMSGNIYSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---VEFVA 249
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y + +
Sbjct: 250 CGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-RVTQI 300
Query: 257 DCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
CG +HT + VS G V+S+G K G N TR++
Sbjct: 301 ACGRWHTLAYVSDLGKVFSFGSGKD-GQLGNGG-TRDQ 336
Score = 175 (66.7 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 53/171 (30%), Positives = 81/171 (47%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 250
+ ++TCG +H+ L+ E W G +GQLG G S P+ V+ L
Sbjct: 140 IIQITCGDYHSLALSKGG------ELFAW--GQNLHGQLGVGRKFPSTTTPQIVEHLAG- 190
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V L + G H+ +S +G+++SWG + C L E+ D P LI G
Sbjct: 191 VPLAQISAGEAHSMALSMSGNIYSWGKNE----CGQLGLGHTESKD--DPSLIEGLDNQK 244
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+F VACG +H+ L+T DG L+++G G+ G LG T + P +V
Sbjct: 245 VEF-----VACGGSHSALLTQDGL-LFTFGAGKHGQLGHNSTQNELRPCLV 289
Score = 158 (60.7 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 47/134 (35%), Positives = 61/134 (45%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG L G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQ-NL-HGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G Y SWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNIY--------SWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 193 YEVTCGSFHTALLT 206
V CG H+ALLT
Sbjct: 246 EFVACGGSHSALLT 259
Score = 140 (54.3 bits), Expect = 8.5e-06, P = 8.5e-06
Identities = 49/167 (29%), Positives = 85/167 (50%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE + +WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGELF--------AWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
Q V V+ CG H+++++ G ++++G K L N+ T+NE
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGKHGQLGHNS--TQNE 283
Score = 133 (51.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 46/140 (32%), Positives = 74/140 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++G E GQLG G T+S P ++ L Q V V+ CG H+++++ G ++++G
Sbjct: 213 YSWGKNECGQLGLGHTESKDDPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFTFGAG 270
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
K L N+ T+NE + P L++ G + Q+ACG HT+ D K++S
Sbjct: 271 KHGQLGHNS--TQNE----LRPCLVAELV--GYRV---TQIACGRWHTLAYVSDLGKVFS 319
Query: 339 WGRGRSGVLGTGKTIDFFAP 358
+G G+ G LG G T D P
Sbjct: 320 FGSGKDGQLGNGGTRDQLMP 339
Score = 121 (47.7 bits), Expect = 0.00097, P = 0.00097
Identities = 32/109 (29%), Positives = 58/109 (53%)
Query: 140 VALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
V V+ G ++ +D + +++GA +GQLG ++ LRP ++ + V ++
Sbjct: 245 VEFVACGGSHSALLTQDGLLFTFGAGKHGQLGHNSTQNELRPCLVAEL---VGYRVTQIA 301
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
CG +HT +D+ ++FG G++GQLG+G T+ L+P VK
Sbjct: 302 CGRWHTLAYV-----SDL--GKVFSFGSGKDGQLGNGGTRDQLMPLPVK 343
>UNIPROTKB|Q8IVU3 [details] [associations]
symbol:HERC6 "Probable E3 ubiquitin-protein ligase HERC6"
species:9606 "Homo sapiens" [GO:0005829 "cytosol" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HOVERGEN:HBG050878 HSSP:Q9UEP9 EMBL:AF336798
EMBL:AY653201 EMBL:AK000644 EMBL:AK092403 EMBL:AK295832
EMBL:BC035775 EMBL:BC042047 EMBL:AL833664 EMBL:BX647121
IPI:IPI00168048 IPI:IPI00455627 IPI:IPI00554785
RefSeq:NP_001158608.1 RefSeq:NP_060382.3 UniGene:Hs.529317
ProteinModelPortal:Q8IVU3 SMR:Q8IVU3 IntAct:Q8IVU3 STRING:Q8IVU3
PhosphoSite:Q8IVU3 DMDM:74750679 PaxDb:Q8IVU3 PRIDE:Q8IVU3
Ensembl:ENST00000264346 Ensembl:ENST00000273960
Ensembl:ENST00000380265 GeneID:55008 KEGG:hsa:55008 UCSC:uc011cdi.2
UCSC:uc011cdj.2 CTD:55008 GeneCards:GC04P089299 HGNC:HGNC:26072
HPA:HPA035846 MIM:609249 neXtProt:NX_Q8IVU3 PharmGKB:PA134894313
InParanoid:Q8IVU3 OMA:HIFAGTY GenomeRNAi:55008 NextBio:58353
ArrayExpress:Q8IVU3 Bgee:Q8IVU3 Genevestigator:Q8IVU3
Uniprot:Q8IVU3
Length = 1022
Score = 168 (64.2 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 65/218 (29%), Positives = 100/218 (45%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V G SLA+ + G ++ WG G F +S FTP + + +++V+CG
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG-AGSEGQLGIGEFKEIS-FTPKKIMTLNDIKIIQVSCGH 137
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWAVYEV 195
H +AL +D +SWG N++GQLGLG S+ P+ + + + P A +V
Sbjct: 138 YHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA--QV 186
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVKELPQ 249
G H+ L S+C T FG G N GQL G + P V L
Sbjct: 187 AAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKN 235
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCP 285
+ +V + CG HT+V++ G V+++G + LG P
Sbjct: 236 -LGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSP 272
Score = 158 (60.7 bits), Expect = 9.3e-08, P = 9.3e-08
Identities = 51/170 (30%), Positives = 77/170 (45%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G S +P V G + +VA G H AL G ++ WG+N+ GQL
Sbjct: 163 GKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLCGTSF--------GWGSNSAGQLA 214
Query: 169 LGDRESRLRP-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
L R ++ K + + VY ++CG HTA+LT + +TFG +
Sbjct: 215 LSGRNVPVQSNKPLSVGALKNLGVVY-ISCGDAHTAVLTQ--------DGKVFTFGDNRS 265
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
GQLG+ T P+ V+ + V +DCG +HT + V + G V S+G
Sbjct: 266 GQLGYSPTPEKRGPQLVERIDGLVS--QIDCGSYHTLAYVHTTGQVVSFG 313
Score = 148 (57.2 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 48/171 (28%), Positives = 81/171 (47%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 250
+ +V+CG +H+ L+ +S +++G +GQLG G S P++V+ L +
Sbjct: 130 IIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EG 180
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ L V G H+ +S G + WG L + RN + P+ + G
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPVQSNKPLSVGALKNLG 237
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V ++CG AHT ++T DG K++++G RSG LG T + P +V
Sbjct: 238 V-----VYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEKRGPQLV 282
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 56/200 (28%), Positives = 84/200 (42%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
S G N+ GQLG R R ++ E V V+CG H+ + H+ R
Sbjct: 46 SCGDNSRGQLG---RRGAQRGELPEPIQALETLIVDLVSCGKEHSLAVCHKGRV------ 96
Query: 218 MCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W G G GQLG G + + P+++ L + ++ V CG +H+ +S V+SWG
Sbjct: 97 FAW--GAGSEGQLGIGEFKEISFTPKKIMTLND-IKIIQVSCGHYHSLALSKDSQVFSWG 153
Query: 277 MEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
G LGL E SP + G QVA G AH+ ++ G
Sbjct: 154 KNSHGQLGL-------GKEFPSQASPQRV--RSLEGIPL---AQVAAGGAHSFALSLCGT 201
Query: 335 KLWSWGRGRSGVLG-TGKTI 353
+ WG +G L +G+ +
Sbjct: 202 S-FGWGSNSAGQLALSGRNV 220
Score = 132 (51.5 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 37/136 (27%), Positives = 57/136 (41%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ G + WG+ + G V S P V VV
Sbjct: 181 IPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKNLGVVY 240
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CG H L G+ + ++G N +GQLG + P+++E +
Sbjct: 241 ISCGDAHTAVLTQDGKVF--------TFGDNRSGQLGYSPTPEKRGPQLVERIDG----L 288
Query: 192 VYEVTCGSFHTALLTH 207
V ++ CGS+HT H
Sbjct: 289 VSQIDCGSYHTLAYVH 304
Score = 119 (46.9 bits), Expect = 5.0e-14, Sum P(2) = 5.0e-14
Identities = 30/90 (33%), Positives = 47/90 (52%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ +KG ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVC-----HKGR---VFAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
PK I T N + +V+CG +H+ L+
Sbjct: 118 TPKKIMTLNDIK---IIQVSCGHYHSLALS 144
Score = 77 (32.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 38/136 (27%), Positives = 59/136 (43%)
Query: 217 SMCWT-FGLGEN--GQL---GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
S+C T FG G N GQL G + P V L + +V + CG HT+V++ G
Sbjct: 197 SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVGALKN-LGVVYISCGDAHTAVLTQDG 255
Query: 271 DVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
V+++G + LG P + + I L+S Q+ CG+ HT+
Sbjct: 256 KVFTFGDNRSGQLGYSPTPEKRGPQLVERIDG-LVS-------------QIDCGSYHTLA 301
Query: 329 VTDDGYKLWSWGRGRS 344
++ S+G G S
Sbjct: 302 YVHTTGQVVSFGHGPS 317
>UNIPROTKB|F1NBC5 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AADN02016126 EMBL:AADN02016127
EMBL:AADN02016128 EMBL:AADN02016129 IPI:IPI00572483
Ensembl:ENSGALT00000016878 ArrayExpress:F1NBC5 Uniprot:F1NBC5
Length = 1050
Score = 169 (64.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 67/217 (30%), Positives = 96/217 (44%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED Y+ G N GQLG S+ P I Q + V CG H+ L+
Sbjct: 51 EDGEVYTCGLNTKGQLGHESEGSKPEP-IGALAGQH----IVHVACGESHSVALS----- 100
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
D + W G G +GQLG T + A+ VP +K+L Q L + CG +H +++ G
Sbjct: 101 -DQGQVFSW--GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTIL-QISCGNWHCLALAADG 156
Query: 271 DVWSWGMEK----GLGL-CPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
++WG GLG CP+ AS R ++ D I P+ QVA G A
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PL---------------AQVAAGGA 200
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H+ ++ G ++ WG+ SG LG D +P V
Sbjct: 201 HSFALSLSG-AVFGWGKNSSGQLGLSDERDRESPCHV 236
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N++GQLGL D R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 276 G 276
G
Sbjct: 320 G 320
Score = 139 (54.0 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 43/140 (30%), Positives = 68/140 (48%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHG 126
H +K V GG S+ + G ++ C L +T+G S + P P+ G
Sbjct: 32 HDRNVK--EVACGGNHSVFLLEDGEVY---TCGL---NTKGQLGHESEGSKPEPIGALAG 83
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFN 185
+V VACG H VAL G+ + SWGA ++GQLGL E + P++I+ N
Sbjct: 84 QHIVHVACGESHSVALSDQGQVF--------SWGAGSDGQLGLTTIEDAVTVPRLIKKLN 135
Query: 186 QDSPWAVYEVTCGSFHTALL 205
Q + + +++CG++H L
Sbjct: 136 QQT---ILQISCGNWHCLAL 152
Score = 128 (50.1 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G+N GQLG + P VK L +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK-VVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G C L + D ++P + G + Q+ACG HT+ ++++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLEL--MGSEVS---QIACGRHHTLAFVPSSGMIYAF 319
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G G LGTG T + P+ V
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPV 341
Score = 126 (49.4 bits), Expect = 0.00029, P = 0.00029
Identities = 40/124 (32%), Positives = 58/124 (46%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
++C WG ++ GQ G+G + P+ + F D V EV CG H+ L
Sbjct: 1 MLC--WGYSSFGQPGIGSNLQVIIPEPQVYGFIHDRN--VKEVACGGNHSVFLLE----- 51
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ +T GL GQLGH + S PE + L ++V V CG H+ +S G V
Sbjct: 52 ---DGEVYTCGLNTKGQLGHESEGSK--PEPIGALAGQ-HIVHVACGESHSVALSDQGQV 105
Query: 273 WSWG 276
+SWG
Sbjct: 106 FSWG 109
Score = 122 (48.0 bits), Expect = 0.00078, P = 0.00078
Identities = 42/134 (31%), Positives = 62/134 (46%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPE-QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQ G G+ ++PE QV + V CG H+ + G+V++ G
Sbjct: 2 LCW--GYSSFGQPGIGSNLQVIIPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVYTCG 59
Query: 277 ME-KGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
+ KG L G PI ++G Q V VACG +H+V ++D G
Sbjct: 60 LNTKG-------QLGHESEGSKPEPIGALAG--------QHIVHVACGESHSVALSDQG- 103
Query: 335 KLWSWGRGRSGVLG 348
+++SWG G G LG
Sbjct: 104 QVFSWGAGSDGQLG 117
Score = 112 (44.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
I V G S+A+ + G ++ WG S + G + + P + + T+++
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWG----AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 190
++CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ + P
Sbjct: 142 ISCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GIPL 192
Query: 191 AVYEVTCGSFHTALLT 206
A +V G H+ L+
Sbjct: 193 A--QVAAGGAHSFALS 206
>UNIPROTKB|P18754 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0007067 "mitosis" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0007088
"regulation of mitosis" evidence=IDA] [GO:0000082 "G1/S transition
of mitotic cell cycle" evidence=IMP] [GO:0007090 "regulation of S
phase of mitotic cell cycle" evidence=IMP] [GO:0042393 "histone
binding" evidence=IDA] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000794 "condensed nuclear chromosome" evidence=IDA]
[GO:0007052 "mitotic spindle organization" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0031492 "nucleosomal DNA binding" evidence=IDA]
[GO:0051225 "spindle assembly" evidence=IMP] [GO:0007059
"chromosome segregation" evidence=IMP] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0016032 "viral reproduction" evidence=TAS]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Reactome:REACT_116125 GO:GO:0007088 GO:GO:0007059
GO:GO:0005654 GO:GO:0016032 GO:GO:0051301 GO:GO:0007067
GO:GO:0007052 GO:GO:0051225 GO:GO:0000082 GO:GO:0031965
GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0000794 GO:GO:0042393 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 PDB:1I2M PDBsum:1I2M KO:K11493
EMBL:X12654 EMBL:X06130 EMBL:D00591 EMBL:AF498924 EMBL:BC007300
EMBL:BC010067 EMBL:BC036903 EMBL:BC069198 EMBL:S75708
IPI:IPI00001661 IPI:IPI00747309 PIR:A26691 RefSeq:NP_001041659.1
RefSeq:NP_001041660.1 RefSeq:NP_001041664.1 RefSeq:NP_001260.1
UniGene:Hs.469723 PDB:1A12 PDBsum:1A12 ProteinModelPortal:P18754
SMR:P18754 DIP:DIP-35416N IntAct:P18754 MINT:MINT-240062
STRING:P18754 PhosphoSite:P18754 DMDM:132170 PaxDb:P18754
PRIDE:P18754 DNASU:1104 Ensembl:ENST00000373831
Ensembl:ENST00000373832 Ensembl:ENST00000373833
Ensembl:ENST00000398958 GeneID:1104 KEGG:hsa:1104 UCSC:uc001bqa.2
UCSC:uc001bqf.2 CTD:1104 GeneCards:GC01P028834 HGNC:HGNC:1913
HPA:CAB015413 HPA:HPA027573 HPA:HPA027574 MIM:179710
neXtProt:NX_P18754 PharmGKB:PA26449 HOGENOM:HOG000234341
HOVERGEN:HBG017712 OMA:RETTEEG PhylomeDB:P18754
EvolutionaryTrace:P18754 GenomeRNAi:1104 NextBio:4572
ArrayExpress:P18754 Bgee:P18754 CleanEx:HS_RCC1
Genevestigator:P18754 GermOnline:ENSG00000180198 Uniprot:P18754
Length = 421
Score = 208 (78.3 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 99/355 (27%), Positives = 151/355 (42%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ + G +++WG+ D++ G
Sbjct: 99 LGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS--FRDNN--GVIG 154
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG--------- 160
L+ S PV VVKVA G++H+V L + G+ Y L C G
Sbjct: 155 LLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELF 211
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESM 218
AN G+ GL E L PK + ++ S V + CG++ T ++H E
Sbjct: 212 ANRGGRQGL---ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGH 260
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM 277
+ FGL QLG T+S +P+ + V G HT + S G +S G
Sbjct: 261 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E G LGL A + P LIS + VACGA+ VT DG +
Sbjct: 321 AEYGRLGLGEGAE-------EKSIPTLIS-------RLPAVSSVACGASVGYAVTKDG-R 365
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
+++WG G + LGTG+ D ++P ++ L +++GG + KD E
Sbjct: 366 VFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLS-VSSGGQHTVLLVKDKE 419
Score = 121 (47.7 bits), Expect = 0.00029, P = 0.00029
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 76/295 (25%), Positives = 116/295 (39%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHT 128
P + +AGGM ++ + +G ++ +G C D G + V S P V +
Sbjct: 66 PEDVVQAEAGGMHTVCLSKSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EK 120
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQ 186
VV+V+ G H AL G + WG+ +NNG +GL E + +
Sbjct: 121 VVQVSAGDSHTAALTDDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQL 170
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQL-----GHGTTQSALV 240
D P V +V G+ H +LT D+ C G LG +L G + LV
Sbjct: 171 DVP--VVKVASGNDHLVMLT---ADGDLYTLGCGEQGQLGRVPELFANRGGRQGLERLLV 225
Query: 241 PEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
P+ V + +V CG + T +S G V+ G GL L
Sbjct: 226 PKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY------GFGLSNYHQLGTPGTES 279
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P ++ + + K V + G HTV + +G K +S GR G LG G+
Sbjct: 280 CFIPQNLT-SFKNSTKSW--VGFSGGQHHTVCMDSEG-KAYSLGRAEYGRLGLGE 330
>UNIPROTKB|F1NCH3 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:KLVIQPT EMBL:AADN02028016 IPI:IPI00586918
Ensembl:ENSGALT00000006135 ArrayExpress:F1NCH3 Uniprot:F1NCH3
Length = 1048
Score = 216 (81.1 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 66/213 (30%), Positives = 102/213 (47%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G N+ GQLG ++R RP+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKARKRPEHVGALDAQN---IVAVSCGEAHTLAL------ 99
Query: 212 NDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
ND + W GL +GQLG GT + VP +K L + + +V V CG +H+ +S
Sbjct: 100 NDKGQVYAW--GLATDGQLGLPGTEECIRVPRNIKSLSE-IQIVQVACGYYHSLALSKGS 156
Query: 271 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
+V+SWG K G LGL + + I +L G F Q+A G AH+ +
Sbjct: 157 EVFSWGQNKYGQLGL--GYEYKKQNSPHVIKSLL-------GIPF---AQIAAGGAHSFV 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDDNDRYVPTLL 236
Score = 180 (68.4 bits), Expect = 6.3e-10, Sum P(2) = 6.3e-10
Identities = 51/151 (33%), Positives = 71/151 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLGL D R P ++++ V + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK---VVHICCGEDHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
+TFG G GQLGH +T + P +V EL + + + CG HT+ V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFVPSSGRIYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGTTSNRKSPFTVKGN 344
Score = 131 (51.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 43/134 (32%), Positives = 63/134 (47%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
++C WG + GQLGLG D E L P+ + F + +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR---IRDVGCGLRHTVFVLD---- 51
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +T G + GQLGH + PE V L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGHEKARKR--PEHVGALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 272 VWSWGM--EKGLGL 283
V++WG+ + LGL
Sbjct: 105 VYAWGLATDGQLGL 118
Score = 124 (48.7 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 45/152 (29%), Positives = 67/152 (44%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDDNDRYVPTLLKSL-RTQKVVHICCGEDHTAALTKEGGVFTFGAG- 269
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N I+P + G Q+ CG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSLV---TQITCGRQHTTAFVPSSGRIYSF 319
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEE 369
G G +G LGTG T + +P V W P + +
Sbjct: 320 GLGGNGQLGTGTTSNRKSPFTVKGNWLPYSTQ 351
Score = 123 (48.4 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 46/175 (26%), Positives = 67/175 (38%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ C I P +++ S+ I+I V G SLA+
Sbjct: 113 DGQLGLPGTEE---C-------IRVPRNIKSLSE------IQIVQVACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G+ +P + G ++A G H L +G
Sbjct: 157 EVFSWGQNKYGQLGL--GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ WG N GQLGL D R P ++++ V + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK---VVHICCGEDHTAALT 258
Score = 118 (46.6 bits), Expect = 1.7e-11, Sum P(3) = 1.7e-11
Identities = 38/134 (28%), Positives = 64/134 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I +V G +LA+++ G ++ WG G + P + +V+VA
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGLATDGQLGLPGTEECIR--VPRNIKSLSEIQIVQVA 143
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAV 192
CG H +AL KG ++ +SWG N GQLGLG + + + P +I++ P+A
Sbjct: 144 CGYYHSLALS------KGSEV--FSWGQNKYGQLGLGYEYKKQNSPHVIKSL-LGIPFA- 193
Query: 193 YEVTCGSFHTALLT 206
++ G H+ +LT
Sbjct: 194 -QIAAGGAHSFVLT 206
Score = 106 (42.4 bits), Expect = 2.8e-10, Sum P(3) = 2.8e-10
Identities = 27/90 (30%), Positives = 44/90 (48%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V +V V+CG H +AL G+ Y +WG +GQLGL E +R
Sbjct: 75 PEHVGALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLATDGQLGLPGTEECIR 126
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLT 206
P+ I++ ++ + +V CG +H+ L+
Sbjct: 127 VPRNIKSLSEIQ---IVQVACGYYHSLALS 153
Score = 82 (33.9 bits), Expect = 7.2e-08, Sum P(3) = 7.2e-08
Identities = 30/113 (26%), Positives = 43/113 (38%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F + V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
C G N+ GQLG ++R RP+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKARKRPEHVGALDAQN---IVAVSCGEAHTLALNDK 102
Score = 46 (21.3 bits), Expect = 6.9e-14, Sum P(2) = 6.9e-14
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 406 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISL 442
+KL ++ L V+E + S+L +F K +D+ + L
Sbjct: 534 LKLEKAPLKVLENWWSVLEPPLFLKIVELYKDVVVHL 570
>RGD|1306366 [details] [associations]
symbol:Herc1 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 1" species:10116 "Rattus norvegicus"
[GO:0010507 "negative regulation of autophagy" evidence=ISO]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISO] [GO:0031175 "neuron projection development"
evidence=ISO] [GO:0050885 "neuromuscular process controlling
balance" evidence=ISO] RGD:1306366 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OrthoDB:EOG40GCPW
GeneTree:ENSGT00700000104312 IPI:IPI00765979
Ensembl:ENSRNOT00000049300 UCSC:RGD:1306366 Uniprot:D3Z9N9
Length = 1203
Score = 219 (82.2 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 139 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 184 (69.8 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 147
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 148 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 204
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 153 (58.9 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 76 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 131 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 276
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 43 (20.2 bits), Expect = 9.5e-14, Sum P(2) = 9.5e-14
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 414 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 472
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 473 YRNMLAGVKDKLMKRRIQEIVNECL 497
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
>UNIPROTKB|E1C4H7 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00632 InterPro:IPR017986
InterPro:IPR000569 InterPro:IPR001680 InterPro:IPR003877
InterPro:IPR015880 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 SMART:SM00355 INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0008270 GO:GO:0016567 GO:GO:0005622
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:AADN02040444
EMBL:AADN02040445 EMBL:AADN02040446 IPI:IPI00593079
Ensembl:ENSGALT00000005344 Uniprot:E1C4H7
Length = 4863
Score = 220 (82.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 139 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4133
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4134 EE---VVQMSCGFKHSAVVT--------ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4182
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 276
L Y + V CGL HT VS+ G VW++G
Sbjct: 4183 LEGY-QIGQVACGLNHTVAVSTDGSMVWAFG 4212
Score = 184 (69.8 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 147
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 148 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 204
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 161 (61.7 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 55/207 (26%), Positives = 98/207 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTVAVS-----TD--G 4205
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCG-IGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 277 M--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
++ +GL P RN P+L G +D +A GA HT+ ++ G
Sbjct: 4265 QVSDRLIGL-PEGR-ARNHNRPQQVPVL------SGVFIED---IAVGAEHTLALSSTG- 4312
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WG G LG G T P ++
Sbjct: 4313 DVYAWGSNSEGQLGLGHTNHVREPTLI 4339
Score = 153 (58.9 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 76 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 131 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 276
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 151 (58.2 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV++ G ++++G +
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTADGKLFTFGNGD 4162
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL ++ E A+ I QVACG HTV V+ DG +W
Sbjct: 4163 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTVAVSTDGSMVW 4209
Query: 338 SWGRGRSGVLGTGKT 352
++G G G LG G +
Sbjct: 4210 AFGDGDYGKLGLGNS 4224
Score = 126 (49.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLT 206
V EV+CGS HT L+
Sbjct: 563 -----VGEVSCGSSHTIALS 577
Score = 107 (42.7 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+C AG SLA+ + G ++ WG C + G S ++ P + + +V +
Sbjct: 618 KVC---AGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWA 191
+ G H +AL E Y +WG N+ GQ G G+ + +PK + + S
Sbjct: 671 SIGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGVS--- 719
Query: 192 VYEVTCGSFHTALLTHRKRPNDML 215
+ +++ G+ H+ T R ++
Sbjct: 720 IQQISAGTSHSLAWTALPRDRQVV 743
Score = 104 (41.7 bits), Expect = 2.5e-11, Sum P(2) = 2.5e-11
Identities = 41/159 (25%), Positives = 65/159 (40%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGG 109
F +G DS + T K + V G ++A+ G +W +G D+ G
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGH 596
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ P + G + KV GS+ +AL S G+ Y +WG LG
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGC 646
Query: 170 GDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
G E+ LRPK+IE + + +++ G H L+H
Sbjct: 647 GSSEATALRPKLIEEL---AATRIVDISIGDSHCLALSH 682
Score = 87 (35.7 bits), Expect = 6.8e-07, Sum P(2) = 6.8e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 210 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3987 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPVAA---PSFSQAQQVVCGQNCTFVI 4042
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 325
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4043 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4093
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ +T+ G +++SWG G G LG G +
Sbjct: 4094 SMALTESG-EVFSWGDGDYGKLGHGNS 4119
Score = 56 (24.8 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 14/72 (19%), Positives = 30/72 (41%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A +I + G LA+ + ++ WGN + ++ P V G ++
Sbjct: 663 AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGVSI 720
Query: 130 VKVACGSEHVVA 141
+++ G+ H +A
Sbjct: 721 QQISAGTSHSLA 732
Score = 41 (19.5 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 474 RNMLAGVKDKLMKRRIQEIVNECL 497
RN+L + D + IQE+V E L
Sbjct: 823 RNLLFRLMDSSVPDEIQEVVIETL 846
Score = 38 (18.4 bits), Expect = 5.7e-12, Sum P(2) = 5.7e-12
Identities = 17/74 (22%), Positives = 31/74 (41%)
Query: 381 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 439
+ E+K + +E+ DE L +++ ++E + HGS GK + A +
Sbjct: 2010 EQEMKLQKQGESEDEDENLPIQEVSFDPEKAQCCIVENGQILTHGS-GGKGYGLASTGVT 2068
Query: 440 ISLKDMGFFDITKE 453
F+ I KE
Sbjct: 2069 SGCYQWKFY-IVKE 2081
Score = 38 (18.4 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 33 GQLGFSGSNSLVPCVIEQF 51
GQL +G N +VP F
Sbjct: 4008 GQLAEAGRNVMVPVAAPSF 4026
>RGD|1310971 [details] [associations]
symbol:Herc4 "HECT and RLD domain containing E3 ubiquitin
protein ligase 4" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA;IBA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA;ISO;ISS]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0042787
"protein ubiquitination involved in ubiquitin-dependent protein
catabolic process" evidence=IBA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143 RGD:1310971
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 GeneTree:ENSGT00660000095216
HOGENOM:HOG000208452 HOVERGEN:HBG050878 HSSP:Q9UEP9 CTD:26091
KO:K10615 OMA:KLVIQPT OrthoDB:EOG44XJG1 EMBL:BC087104
IPI:IPI00360837 RefSeq:NP_001012074.1 UniGene:Rn.18143
ProteinModelPortal:Q5PQN1 PhosphoSite:Q5PQN1 PRIDE:Q5PQN1
Ensembl:ENSRNOT00000051367 GeneID:309758 KEGG:rno:309758
UCSC:RGD:1310971 InParanoid:Q5PQN1 NextBio:661276
ArrayExpress:Q5PQN1 Genevestigator:Q5PQN1 Uniprot:Q5PQN1
Length = 1057
Score = 213 (80.0 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 68/215 (31%), Positives = 102/215 (47%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 212 NDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLQGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 271 DVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
+V+ WG K GLG+ E SP LI G F +QVA G AH+
Sbjct: 157 EVFCWGQNKYGQLGLGI---------ECQKQTSPQLIKSL--LGIPF---MQVAAGGAHS 202
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++T G ++ WGR + G LG D + P ++
Sbjct: 203 FVLTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 189 (71.6 bits), Expect = 6.6e-11, Sum P(2) = 6.6e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 166 (63.5 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 61/213 (28%), Positives = 96/213 (45%)
Query: 150 KGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
K ++ C WG N GQLGLG + + + P++I++ P+ +V G H+ +LT
Sbjct: 154 KASEVFC--WGQNKYGQLGLGIECQKQTSPQLIKSL-LGIPFM--QVAAGGAHSFVLT-- 206
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
L + +G + GQLG VP +K L +V + CG HT+ ++
Sbjct: 207 ------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK-IVYICCGEDHTAALTK 259
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G V+++G G G L N I+P + G Q+ACG HT
Sbjct: 260 EGGVFTFGAG-GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSA 308
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++S+G G +G LGTG T + +P V
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 144 (55.7 bits), Expect = 5.0e-06, Sum P(2) = 5.0e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLD---- 51
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 272 VWSWGMEKG--LGL 283
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 133 (51.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 50/175 (28%), Positives = 68/175 (38%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS C I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE---C-------IRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ WG N GQLGL D R P ++++ VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALT 258
Score = 46 (21.3 bits), Expect = 1.5e-13, Sum P(2) = 1.5e-13
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 406 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 465
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 466 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 494
L LE +R N G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNERTGQLIQYDKFYIHEVQELID 626
>UNIPROTKB|F1MNS0 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
OMA:HHYQDGI GeneTree:ENSGT00700000104312 EMBL:DAAA02028744
EMBL:DAAA02028745 EMBL:DAAA02028746 IPI:IPI00924381
Ensembl:ENSBTAT00000061038 ArrayExpress:F1MNS0 Uniprot:F1MNS0
Length = 4857
Score = 220 (82.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 139 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4077 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4128
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4129 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4177
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 276
L Y + V CGL HT VS+ G VW++G
Sbjct: 4178 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4207
Score = 184 (69.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 147
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDTPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 148 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 204
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 172 (65.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4151 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4200
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4201 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4259
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 4260 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 4307
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G LG G T P +V
Sbjct: 4308 YAWGSNSEGQLGLGHTNHVREPTLV 4332
Score = 153 (58.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 76 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 131 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 276
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 150 (57.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4099 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4157
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4158 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4204
Query: 338 SWGRGRSGVLGTGKT 352
++G G G LG G +
Sbjct: 4205 AFGDGDYGKLGLGNS 4219
Score = 126 (49.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLT 206
V EV+CGS HT L+
Sbjct: 563 -----VGEVSCGSSHTIALS 577
Score = 107 (42.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+C AG SLA+ + G ++ WG C + G S ++ P + + +V +
Sbjct: 618 KVC---AGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWA 191
+ G H +AL E Y +WG N+ GQ G G+ + +PK + + A
Sbjct: 671 SIGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---A 719
Query: 192 VYEVTCGSFHTALLTHRKRPNDML 215
+ +++ G+ H+ T R ++
Sbjct: 720 IQQISAGTSHSLAWTALPRDRQVV 743
Score = 104 (41.7 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 41/159 (25%), Positives = 65/159 (40%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGG 109
F +G DS + T K + V G ++A+ G +W +G D+ G
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGH 596
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ P + G + KV GS+ +AL S G+ Y +WG LG
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGC 646
Query: 170 GDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
G E+ LRPK+IE + + +++ G H L+H
Sbjct: 647 GSSEATALRPKLIEEL---AATRIVDISIGDSHCLALSH 682
Score = 88 (36.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 210 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3982 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4037
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 325
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4038 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4088
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ +T+ G +++SWG G G LG G +
Sbjct: 4089 SMALTESG-EVFSWGDGDYGKLGHGNS 4114
Score = 55 (24.4 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 14/72 (19%), Positives = 29/72 (40%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A +I + G LA+ + ++ WGN + ++ P V G +
Sbjct: 663 AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGIAI 720
Query: 130 VKVACGSEHVVA 141
+++ G+ H +A
Sbjct: 721 QQISAGTSHSLA 732
Score = 43 (20.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 414 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 472
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 473 YRNMLAGVKDKLMKRRIQEIVNECL 497
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 42 (19.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 381 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 439
+ EIK + EE DE L +++ ++E + HGS GK + A +
Sbjct: 2007 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCIVENGQILTHGS-GGKGYGLASTGVT 2065
Query: 440 ISLKDMGFFDITKE 453
F+ I KE
Sbjct: 2066 SGCYQWKFY-IVKE 2078
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 33 GQLGFSGSNSLVPCVIEQF 51
GQL +G N +VP F
Sbjct: 4003 GQLAEAGRNVMVPAAAPSF 4021
>UNIPROTKB|F1S098 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0016567
GO:GO:0005622 InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 SUPFAM:SSF56204
CTD:8925 KO:K10594 OMA:HHYQDGI GeneTree:ENSGT00700000104312
EMBL:CU550694 EMBL:CU582937 RefSeq:XP_001927286.4 UniGene:Ssc.96208
UniGene:Ssc.97542 Ensembl:ENSSSCT00000005038 GeneID:100153537
KEGG:ssc:100153537 Uniprot:F1S098
Length = 4859
Score = 220 (82.5 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 67/217 (30%), Positives = 106/217 (48%)
Query: 139 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---ISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4080 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4131
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4132 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4180
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 276
L Y + V CGL HT VS+ G VW++G
Sbjct: 4181 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4210
Score = 184 (69.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 147
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 148 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 204
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 172 (65.6 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4154 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4203
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4204 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4262
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 4263 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 4310
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G LG G T P +V
Sbjct: 4311 YAWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 153 (58.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 76 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 131 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 276
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 150 (57.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4102 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4160
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4161 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4207
Query: 338 SWGRGRSGVLGTGKT 352
++G G G LG G +
Sbjct: 4208 AFGDGDYGKLGLGNS 4222
Score = 126 (49.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLT 206
V EV+CGS HT L+
Sbjct: 563 -----VGEVSCGSSHTIALS 577
Score = 107 (42.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
Identities = 35/144 (24%), Positives = 64/144 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+C AG SLA+ + G ++ WG C + G S ++ P + + +V +
Sbjct: 618 KVC---AGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDI 670
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWA 191
+ G H +AL E Y +WG N+ GQ G G+ + +PK + + A
Sbjct: 671 SIGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---A 719
Query: 192 VYEVTCGSFHTALLTHRKRPNDML 215
+ +++ G+ H+ T R ++
Sbjct: 720 IQQISAGTSHSLAWTALPRDRQVV 743
Score = 104 (41.7 bits), Expect = 3.3e-11, Sum P(2) = 3.3e-11
Identities = 41/159 (25%), Positives = 65/159 (40%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGG 109
F +G DS + T K + V G ++A+ G +W +G D+ G
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGH 596
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ P + G + KV GS+ +AL S G+ Y +WG LG
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGC 646
Query: 170 GDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
G E+ LRPK+IE + + +++ G H L+H
Sbjct: 647 GSSEATALRPKLIEEL---AATRIVDISIGDSHCLALSH 682
Score = 88 (36.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 210 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3985 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4040
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 325
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4041 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4091
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ +T+ G +++SWG G G LG G +
Sbjct: 4092 SMALTESG-EVFSWGDGDYGKLGHGNS 4117
Score = 55 (24.4 bits), Expect = 8.7e-11, Sum P(2) = 8.7e-11
Identities = 14/72 (19%), Positives = 29/72 (40%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A +I + G LA+ + ++ WGN + ++ P V G +
Sbjct: 663 AATRIVDISIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGIAI 720
Query: 130 VKVACGSEHVVA 141
+++ G+ H +A
Sbjct: 721 QQISAGTSHSLA 732
Score = 43 (20.2 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 414 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 472
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 473 YRNMLAGVKDKLMKRRIQEIVNECL 497
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 42 (19.8 bits), Expect = 2.2e-12, Sum P(2) = 2.2e-12
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 381 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 439
+ EIK + EE DE L +++ ++E + HGS GK + A +
Sbjct: 2008 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCIVENGQILTHGS-GGKGYGLASTGVT 2066
Query: 440 ISLKDMGFFDITKE 453
F+ I KE
Sbjct: 2067 SGCYQWKFY-IVKE 2079
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 33 GQLGFSGSNSLVPCVIEQF 51
GQL +G N +VP F
Sbjct: 4006 GQLAEAGRNVMVPAAAPSF 4024
>UNIPROTKB|Q15751 [details] [associations]
symbol:HERC1 "Probable E3 ubiquitin-protein ligase HERC1"
species:9606 "Homo sapiens" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005086 "ARF
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005737 "cytoplasm" evidence=TAS] Pfam:PF00632
InterPro:IPR017986 InterPro:IPR000569 InterPro:IPR001680
InterPro:IPR003877 InterPro:IPR015943 Pfam:PF00400 Pfam:PF00622
PROSITE:PS50082 PROSITE:PS50237 PROSITE:PS50294 SMART:SM00119
SMART:SM00320 UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005794 GO:GO:0016020 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0006810
InterPro:IPR008985 SUPFAM:SSF49899 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR001870
InterPro:IPR018355 SMART:SM00449 PROSITE:PS50188 GO:GO:0005086
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:U50078 EMBL:AC073167
EMBL:AC118274 EMBL:BC040929 IPI:IPI00022479 PIR:S71752
RefSeq:NP_003913.3 UniGene:Hs.210385 HSSP:Q922Y1
ProteinModelPortal:Q15751 SMR:Q15751 IntAct:Q15751 STRING:Q15751
PhosphoSite:Q15751 DMDM:296434522 PaxDb:Q15751 PRIDE:Q15751
Ensembl:ENST00000443617 GeneID:8925 KEGG:hsa:8925 UCSC:uc002amp.3
CTD:8925 GeneCards:GC15M063900 HGNC:HGNC:4867 HPA:HPA049749
MIM:605109 neXtProt:NX_Q15751 PharmGKB:PA29242 HOGENOM:HOG000168589
HOVERGEN:HBG053919 InParanoid:Q15751 KO:K10594 OMA:HHYQDGI
OrthoDB:EOG40GCPW GenomeRNAi:8925 NextBio:33556 ArrayExpress:Q15751
Bgee:Q15751 CleanEx:HS_HERC1 Genevestigator:Q15751 Uniprot:Q15751
Length = 4861
Score = 221 (82.9 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 68/217 (31%), Positives = 106/217 (48%)
Query: 139 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
+CGS HT L+ R W+FG G+NG+LGHG T P+ ++ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNGKLGHGDTNRVYKPKVIEAL-QGMFIRK 618
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V G + ++S G V++WG LG C ++ T A+ P LI + D
Sbjct: 619 VCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIVD 669
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V+ G +H + ++ D ++++WG G G G +
Sbjct: 670 ---VSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 193 (73.0 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4082 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4133
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4134 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4182
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 276
L Y + V CGL HT VS+ G VW++G
Sbjct: 4183 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4212
Score = 184 (69.8 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 73/277 (26%), Positives = 121/277 (43%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV-----KVA----CGSEHVVALVSAGE- 147
C PDS G +VS VW + H +V K+ S + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKLAPSFSDAQTIEAGQY 413
Query: 148 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 204
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ DG +WS+G G +G LG G T + P ++
Sbjct: 572 HTIALSKDGRTVWSFGGGDNGKLGHGDTNRVYKPKVI 608
Score = 172 (65.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 56/205 (27%), Positives = 98/205 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4156 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4205
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
SM W FG G+ G+LG G + + P+++ L + + V CG + ++ G V+++G
Sbjct: 4206 SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4264
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
++ +GL P RN P+L G +D VA GA HT+ + +G +
Sbjct: 4265 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGAEHTLALASNG-DV 4312
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G LG G T P +V
Sbjct: 4313 YAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 153 (58.9 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 60/210 (28%), Positives = 99/210 (47%)
Query: 76 SVKAGGMMSLAIDNAGAL-----WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+++AG + I G++ +G L DS+ + S + T P H ++
Sbjct: 407 TIEAGQYCTFVISTDGSVRACGKGSYGRLGLGDSNNQ---STLKKLTFEP----H-RSIK 458
Query: 131 KVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
KV+ GS+ H +A + GE + SWG + G+LG G+ ++ PK+I+ Q
Sbjct: 459 KVSSSKGSDGHTLAFTTEGEVF--------SWGDGDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V+ G H+A +T + +T+G G+ G+LGHG + S +P VK++
Sbjct: 511 K--VVVCVSAGYRHSAAVTE--------DGELYTWGEGDFGRLGHGDSNSRNIPTLVKDI 560
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWG 276
+ V CG HT +S G VWS+G
Sbjct: 561 SN---VGEVSCGSSHTIALSKDGRTVWSFG 587
Score = 150 (57.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4104 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4162
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4163 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4209
Query: 338 SWGRGRSGVLGTGKT 352
++G G G LG G +
Sbjct: 4210 AFGDGDYGKLGLGNS 4224
Score = 126 (49.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLT 206
V EV+CGS HT L+
Sbjct: 563 -----VGEVSCGSSHTIALS 577
Score = 108 (43.1 bits), Expect = 1.3e-11, Sum P(2) = 1.3e-11
Identities = 36/144 (25%), Positives = 64/144 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+C AG SLA+ + G ++ WG C + G S ++ P + + +V V
Sbjct: 618 KVC---AGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDV 670
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWA 191
+ G H +AL E Y +WG N+ GQ G G+ + +PK + + A
Sbjct: 671 SIGDSHCLALSHDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---A 719
Query: 192 VYEVTCGSFHTALLTHRKRPNDML 215
+ +++ G+ H+ T R ++
Sbjct: 720 IQQISAGTSHSLAWTALPRDRQVV 743
Score = 105 (42.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 42/159 (26%), Positives = 65/159 (40%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGG 109
F +G DS + T K + V G ++A+ G +W +G D+ G
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGG---GDNGKLGH 596
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ P + G + KV GS+ +AL S G+ Y +WG LG
Sbjct: 597 GDTNRVYKPKVIEALQGMFIRKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGC 646
Query: 170 GDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
G E+ LRPK+IE + + +V+ G H L+H
Sbjct: 647 GSSEATALRPKLIEEL---AATRIVDVSIGDSHCLALSH 682
Score = 88 (36.0 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 210 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3987 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4042
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 325
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4043 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4093
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ +T+ G +++SWG G G LG G +
Sbjct: 4094 SMALTESG-EVFSWGDGDYGKLGHGNS 4119
Score = 56 (24.8 bits), Expect = 6.9e-11, Sum P(2) = 6.9e-11
Identities = 15/72 (20%), Positives = 29/72 (40%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A +I V G LA+ + ++ WGN + ++ P V G +
Sbjct: 663 AATRIVDVSIGDSHCLALSHDNEVYAWGNNSMGQCGQGNSTGPITK--PKKVSGLDGIAI 720
Query: 130 VKVACGSEHVVA 141
+++ G+ H +A
Sbjct: 721 QQISAGTSHSLA 732
Score = 44 (20.5 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 414 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 472
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 763 SFLERYCDKINSEIPPLPFPSSREHHSFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 821
Query: 473 YRNMLAGVKDKLMKRRIQEIVNECL 497
RN+L + D + IQE+V E L
Sbjct: 822 LRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 40 (19.1 bits), Expect = 2.8e-12, Sum P(2) = 2.8e-12
Identities = 19/74 (25%), Positives = 30/74 (40%)
Query: 381 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 439
+ EIK + EE DE L +++ ++E + HGS GK + A +
Sbjct: 2010 EQEIKLQKQGELEEEDENLPIQEVSFDPEKAQCCLVENGQILTHGS-GGKGYGLASTGVT 2068
Query: 440 ISLKDMGFFDITKE 453
F+ I KE
Sbjct: 2069 SGCYQWKFY-IVKE 2081
Score = 39 (18.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 33 GQLGFSGSNSLVPCVIEQF 51
GQL +G N +VP F
Sbjct: 4008 GQLAEAGRNVMVPAAAPSF 4026
Score = 38 (18.4 bits), Expect = 4.5e-12, Sum P(2) = 4.5e-12
Identities = 8/45 (17%), Positives = 25/45 (55%)
Query: 374 ELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE-MKLLQSKLSVME 417
++ TG D++K++ ++ +E S +++ + ++S+ + E
Sbjct: 2439 DMRTGLTSDDVKSQSTTSSKSENEIASFSLDPTLPSVESQHQITE 2483
>UNIPROTKB|E2QYQ5 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 OMA:HHYQDGI
GeneTree:ENSGT00700000104312 EMBL:AAEX03016202
Ensembl:ENSCAFT00000026962 Uniprot:E2QYQ5
Length = 4863
Score = 209 (78.6 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 69/218 (31%), Positives = 104/218 (47%)
Query: 139 VVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
VV VSAG + ED Y+WG + G+LG GD SR P +++ + V EV
Sbjct: 512 VVVCVSAGYRHSAAVTEDGELYTWGEGDFGRLGHGDSNSRNIPTLVKDISN-----VGEV 566
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGEN-GQLGHGTTQSALVPEQVKELPQYVYLV 254
+CGS HT L+ R W+FG G+N G+LGHG T P+ V+ L Q +++
Sbjct: 567 SCGSSHTIALSKDGRT-------VWSFGGGDNVGKLGHGDTNRVYKPKVVEAL-QGMFIR 618
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
V G + ++S G V++WG LG C ++ T A+ P LI +
Sbjct: 619 KVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEELA--ATRIV 669
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
D ++ G +H L D ++++WG G G G +
Sbjct: 670 D---ISIGDSHVWLFVMDN-EVYAWGNNSMGQCGQGNS 703
Score = 193 (73.0 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4083 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4134
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4135 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4183
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 276
L Y + V CGL HT VS+ G VW++G
Sbjct: 4184 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 4213
Score = 176 (67.0 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 74/278 (26%), Positives = 123/278 (44%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVVKVACGS--EHVVAL-------VSAGE- 147
C PDS G +VS VW + H +V+ + +AL + AG+
Sbjct: 354 CASPDSIQTGDAPIVSETCEVYVWGSNSSHQLVEGTQEKILQPKMALSFSDAQTIEAGQY 413
Query: 148 -TYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTAL 204
T+ D + G + G+LGLGD ++ K + TF + GS HT
Sbjct: 414 CTFVISTDGSVRACGKGSYGRLGLGDSNNQSTLKKL-TFEPHRSIKKVSSSKGSDGHTLA 472
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
T E +++G G+ G+LGHG + + P+ ++ Q +V V G H++
Sbjct: 473 FT--------TEGEVFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSA 524
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
V+ G++++WG E G L ++ P L+ G +V+CG++
Sbjct: 525 AVTEDGELYTWG-EGDFG-----RLGHGDSNSRNIPTLVKDISNVG-------EVSCGSS 571
Query: 325 HTVLVTDDGYKLWSWGRGRS-GVLGTGKTIDFFAPAIV 361
HT+ ++ DG +WS+G G + G LG G T + P +V
Sbjct: 572 HTIALSKDGRTVWSFGGGDNVGKLGHGDTNRVYKPKVV 609
Score = 172 (65.6 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 4157 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 4206
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 4207 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 4265
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 4266 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 4313
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G LG G T P +V
Sbjct: 4314 YAWGSNSEGQLGLGHTNHVREPTLV 4338
Score = 150 (57.9 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 4105 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 4163
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 4164 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 4210
Query: 338 SWGRGRSGVLGTGKT 352
++G G G LG G +
Sbjct: 4211 AFGDGDYGKLGLGNS 4225
Score = 126 (49.4 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 42/140 (30%), Positives = 61/140 (43%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y +WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGELY--------TWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLT 206
V EV+CGS HT L+
Sbjct: 563 -----VGEVSCGSSHTIALS 577
Score = 105 (42.0 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 35/144 (24%), Positives = 63/144 (43%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+C AG SLA+ + G ++ WG C + G S ++ P + + +V +
Sbjct: 619 KVC---AGSQSSLALTSTGQVYAWG-C---GACLGCGSSEATALRPKLIEELAATRIVDI 671
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWA 191
+ G HV V E Y +WG N+ GQ G G+ + +PK + + A
Sbjct: 672 SIGDSHVWLFVMDNEVY--------AWGNNSMGQCGQGNSTGPITKPKKVSGLDGI---A 720
Query: 192 VYEVTCGSFHTALLTHRKRPNDML 215
+ +++ G+ H+ T R ++
Sbjct: 721 IQQISAGTSHSLAWTALPRDRQVV 744
Score = 95 (38.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 41/156 (26%), Positives = 63/156 (40%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG-ALWMWGNCPLPDSSTEGG 109
F +G DS + T K + V G ++A+ G +W +G G
Sbjct: 540 FGRLGHGDSNSRNIPTLVKDISNVGEVSCGSSHTIALSKDGRTVWSFGGGDNVGKLGHGD 599
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ V + P V G + KV GS+ +AL S G+ Y +WG LG
Sbjct: 600 TNRV--YKPKVVEALQGMFIRKVCAGSQSSLALTSTGQVY--------AWGCG--ACLGC 647
Query: 170 GDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
G E+ LRPK+IE + + +++ G H L
Sbjct: 648 GSSEATALRPKLIEEL---AATRIVDISIGDSHVWL 680
Score = 88 (36.0 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 42/147 (28%), Positives = 65/147 (44%)
Query: 210 RPNDM-LESMC--WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
RP D L C + +G G +GQL ++ +VP P + V CG T V+
Sbjct: 3988 RPEDWHLGGKCDVYLWGAGRHGQLAEAG-RNVMVPAAA---PSFSQAQQVICGQNCTFVI 4043
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA-AH 325
+ G V + G E G L + + D +IS G V +CG+ H
Sbjct: 4044 QANGTVLACG-EGSYG-----RLGQGNSDDLHVLTVISAL--QGFVVTQLV-TSCGSDGH 4094
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ +T+ G +++SWG G G LG G +
Sbjct: 4095 SMALTESG-EVFSWGDGDYGKLGHGNS 4120
Score = 43 (20.2 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 21/85 (24%), Positives = 37/85 (43%)
Query: 414 SVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLV-RLERF 472
S +ERY ++ I PF + ++ LK + ++ L + ++ R
Sbjct: 764 SFLERYCDKINSEIPPLPFPSSREHHNFLK-LCLKLLSNHLALALAGGVATSILGRQAGP 822
Query: 473 YRNMLAGVKDKLMKRRIQEIVNECL 497
RN+L + D + IQE+V E L
Sbjct: 823 LRNLLFRLMDSTVPDEIQEVVIETL 847
Score = 42 (19.8 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
Identities = 19/74 (25%), Positives = 31/74 (41%)
Query: 381 DDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFA-AEQDIP 439
+ EIK++ EE DE L +++ ++E + HGS GK + A +
Sbjct: 2011 EQEIKSQKQGELEEEDENLPIQEVSFDPEKAQCCLVENGQILTHGS-GGKGYGLASTGVT 2069
Query: 440 ISLKDMGFFDITKE 453
F+ I KE
Sbjct: 2070 SGCYQWKFY-IVKE 2082
Score = 39 (18.8 bits), Expect = 3.9e-09, Sum P(2) = 3.9e-09
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 33 GQLGFSGSNSLVPCVIEQF 51
GQL +G N +VP F
Sbjct: 4009 GQLAEAGRNVMVPAAAPSF 4027
>UNIPROTKB|E1BRZ2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS50012 GeneTree:ENSGT00700000104137 OMA:EREVFAW
EMBL:AADN02025864 IPI:IPI00574044 ProteinModelPortal:E1BRZ2
Ensembl:ENSGALT00000006340 Uniprot:E1BRZ2
Length = 689
Score = 207 (77.9 bits), Expect = 2.3e-13, P = 2.3e-13
Identities = 79/300 (26%), Positives = 127/300 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDF----H 125
++ V AG + +G L MW P T GG SL P V F
Sbjct: 339 EVVQVSAGRTQKAGVTKSGRLIMW---EAPPMGTAGGPSLPGATEQLQPQFVSRFLEGQS 395
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T+ V+CG L G + ++G+ +NG LG G+ +PKI+E
Sbjct: 396 GVTIKHVSCGDLFTACLTDRG--------IIMTFGSGSNGCLGHGNFTDVSQPKIVEAL- 446
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ + +V CG+ H +++ + E W G G+NG+LG GT + P+QV
Sbjct: 447 --LGYEMVQVACGASHVLAVSNER------EVFAW--GRGDNGRLGLGTLECHNSPQQVA 496
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILI 303
P++ V CG+ + V++ + + G + LGL +S D + +
Sbjct: 497 VPPEHE-AQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATV 555
Query: 304 SGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
P Q+PV A G AH+ VT G + +++G + G LGT + P +V+
Sbjct: 556 FTCAQSAPLNQEPVVCADIGTAHSAAVTASG-QCYTFGSNQHGQLGTNSCRNSRVPHLVV 614
Score = 134 (52.2 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 57/216 (26%), Positives = 92/216 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V G LA+ N ++ WG D+ G +L +P V H +V
Sbjct: 450 EMVQVACGASHVLAVSNEREVFAWGR---GDNGRLGLGTLECHNSPQQVAVPPEHEAQRV 506
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---------ESRLRPKIIET 183
CG + + L T + L C G+N +LGL DR E ++ + T
Sbjct: 507 ICGIDSSMVL-----TVNNQILAC---GSNRCNKLGL-DRISSAEEPSPEDQVEEATVFT 557
Query: 184 FNQDSPWAVYEVTC---GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
Q +P V C G+ H+A +T C+TFG ++GQLG + +++ V
Sbjct: 558 CAQSAPLNQEPVVCADIGTAHSAAVT--------ASGQCYTFGSNQHGQLGTNSCRNSRV 609
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
P V L + + + V CG T + + G+V +WG
Sbjct: 610 PHLVVGL-RAMKVTVVACGDAFTVAIGADGEVCTWG 644
Score = 124 (48.7 bits), Expect = 0.00028, P = 0.00028
Identities = 53/226 (23%), Positives = 89/226 (39%)
Query: 129 VVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V+ G E V A + ++WG +NG+LGLG E P+ + +
Sbjct: 442 IVEALLGYEMVQVACGASHVLAVSNEREVFAWGRGDNGRLGLGTLECHNSPQQVAVPPEH 501
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V CG + +LT + + C GL + + + V
Sbjct: 502 E---AQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTC 558
Query: 248 PQYVYL-----VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
Q L V D G H++ V+++G +++G + + L N ++ P L
Sbjct: 559 AQSAPLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQ------HGQLGTNSCRNSRVPHL 612
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ G + VACG A TV + DG ++ +WG+G G LG
Sbjct: 613 VVGL-----RAMKVTVVACGDAFTVAIGADG-EVCTWGKGARGRLG 652
Score = 123 (48.4 bits), Expect = 0.00036, P = 0.00036
Identities = 52/225 (23%), Positives = 92/225 (40%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ G F+ VS P V G+ +V+
Sbjct: 397 VTIKHVSCGDLFTACLTDRGIIMTFGSGS-NGCLGHGNFTDVSQ--PKIVEALLGYEMVQ 453
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ HV+A+ + E + +WG +NG+LGLG E P+ + +
Sbjct: 454 VACGASHVLAVSNEREVF--------AWGRGDNGRLGLGTLECHNSPQQVAVPPEHE--- 502
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V CG + +LT + + C GL + + + V Q
Sbjct: 503 AQRVICGIDSSMVLTVNNQILACGSNRCNKLGLDRISSAEEPSPEDQVEEATVFTCAQSA 562
Query: 252 YL-----VSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNA 287
L V D G H++ V+++G +++G + G C N+
Sbjct: 563 PLNQEPVVCADIGTAHSAAVTASGQCYTFGSNQHGQLGTNSCRNS 607
>ZFIN|ZDB-GENE-070615-14 [details] [associations]
symbol:zgc:163136 "zgc:163136" species:7955 "Danio
rerio" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006464
"cellular protein modification process" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-070615-14 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00852092
Ensembl:ENSDART00000113072 OMA:CELECKL Bgee:F1Q5I9 Uniprot:F1Q5I9
Length = 997
Score = 194 (73.4 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 63/214 (29%), Positives = 96/214 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ + G S+A+ N G L++WG L + +P + G V ++
Sbjct: 117 QVIQIACGDQHSMALTNDGQLFVWGENALGQLGLRK--EQAGTQSPQHLQSLCGIPVAQI 174
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H L +G V + WG+N+ GQLGLGD R P I+++ +
Sbjct: 175 SAGGNHSFVLSLSG--------VVFGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK---T 223
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++CG HTA L+ +TFG G GQLGH + + P V EL +
Sbjct: 224 VSISCGGEHTATLSKG--------GTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL--WGS 273
Query: 253 LVS-VDCGLFHTSVVS-SAGDVWSWG--MEKGLG 282
VS V CG HT V S+ ++S+G M+ LG
Sbjct: 274 KVSQVTCGRHHTLVFEDSSNQIYSFGCGMQGQLG 307
Score = 178 (67.7 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 55/159 (34%), Positives = 74/159 (46%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG G T +P VK L VS+ CG HT+ +S G V+++G
Sbjct: 191 FGWGSNSAGQLGLGDTTDRFIPTIVKSLSGKK-TVSISCGGEHTATLSKGGTVFTFG-SG 248
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N D P L++ G K QV CG HT++ D +++S+
Sbjct: 249 GFG-----QLGHNSLKDEHHPRLVAELW--GSKVS---QVTCGRHHTLVFEDSSNQIYSF 298
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 378
G G G LG G+ + P VL P EF ++L G
Sbjct: 299 GCGMQGQLGNGEQVKQSVPLPVLLPTECTEFTMEKLIAG 337
Score = 138 (53.6 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 59/221 (26%), Positives = 89/221 (40%)
Query: 32 DGQLGFSGSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
DGQL G N+L + EQ T +P L+ I + + AGG S +
Sbjct: 134 DGQLFVWGENALGQLGLRKEQAGT-QSPQHLQS------LCGIPVAQISAGGNHSFVLSL 186
Query: 90 AGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+G ++ WG+ +S+ + G F P+ V G V ++CG EH L S G T
Sbjct: 187 SGVVFGWGS----NSAGQLGLGDTTDRFIPTIVKSLSGKKTVSISCGGEHTATL-SKGGT 241
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA--VYEVTCGSFHTALLT 206
+++G+ GQLG + P+++ W V +VTCG HT L
Sbjct: 242 V-------FTFGSGGFGQLGHNSLKDEHHPRLVAEL-----WGSKVSQVTCGRHHT--LV 287
Query: 207 HRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVPEQVKE 246
N + C G LG Q+ L+P + E
Sbjct: 288 FEDSSNQIYSFGCGMQGQLGNGEQVKQSVPLPVLLPTECTE 328
Score = 80 (33.2 bits), Expect = 2.7e-13, Sum P(2) = 2.7e-13
Identities = 23/88 (26%), Positives = 45/88 (51%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-P 178
P+ V+++ACG +H +AL + G+ + WG N GQLGL ++ + P
Sbjct: 109 PLKGLENRQVIQIACGDQHSMALTNDGQLFV--------WGENALGQLGLRKEQAGTQSP 160
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ +++ P V +++ G H+ +L+
Sbjct: 161 QHLQSLC-GIP--VAQISAGGNHSFVLS 185
>MGI|MGI:1914595 [details] [associations]
symbol:Herc4 "hect domain and RLD 4" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA;TAS] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0016567 "protein ubiquitination" evidence=TAS] [GO:0016874
"ligase activity" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 MGI:MGI:1914595 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0030154
GO:GO:0007283 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOVERGEN:HBG050878 HSSP:Q9UEP9
CTD:26091 KO:K10615 EMBL:AK009436 EMBL:AK143111 EMBL:AK145735
EMBL:AK147723 EMBL:BC026855 EMBL:BC043082 EMBL:BC047157
EMBL:BC060033 IPI:IPI00453903 IPI:IPI00554980 IPI:IPI00828240
RefSeq:NP_080377.2 RefSeq:NP_084390.1 UniGene:Mm.234437
UniGene:Mm.422789 UniGene:Mm.441725 UniGene:Mm.487274
ProteinModelPortal:Q6PAV2 SMR:Q6PAV2 STRING:Q6PAV2
PhosphoSite:Q6PAV2 PaxDb:Q6PAV2 PRIDE:Q6PAV2
Ensembl:ENSMUST00000020258 GeneID:67345 KEGG:mmu:67345
UCSC:uc007fka.2 UCSC:uc007fkc.2 UCSC:uc007fkd.2 InParanoid:Q6PAV2
OMA:KLVIQPT OrthoDB:EOG44XJG1 NextBio:324318 Bgee:Q6PAV2
CleanEx:MM_HERC4 Genevestigator:Q6PAV2 Uniprot:Q6PAV2
Length = 1057
Score = 210 (79.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 66/213 (30%), Positives = 101/213 (47%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G N+ GQLG +SR +P+ + + + + V CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVACGEAHTLAL------ 99
Query: 212 NDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLQGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 271 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
+V+ WG K G LGL + + I +L G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLL-------GIPF---MQVAAGGAHSFV 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 190 (71.9 bits), Expect = 5.1e-11, Sum P(2) = 5.1e-11
Identities = 54/151 (35%), Positives = 72/151 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
+TFG G GQLGH +T + P +V EL + + V CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSGRIYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 171 (65.3 bits), Expect = 6.1e-09, Sum P(2) = 6.1e-09
Identities = 63/213 (29%), Positives = 96/213 (45%)
Query: 150 KGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
K ++ C WG N GQLGLG D + + P++I++ P+ +V G H+ +LT
Sbjct: 154 KASEVFC--WGQNKYGQLGLGIDCQKQTSPQLIKSL-LGIPFM--QVAAGGAHSFVLT-- 206
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
L + +G + GQLG VP +K L +V + CG HT+ ++
Sbjct: 207 ------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK-IVYICCGEDHTAALTK 259
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G V+++G G G L N I+P + G QVACG HT
Sbjct: 260 EGGVFTFGAG-GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQVACGRQHTSA 308
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++S+G G +G LGTG T + +P V
Sbjct: 309 FVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 142 (55.0 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLD---- 51
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVACGEAHTLALNDKGQ 104
Query: 272 VWSWGMEKG--LGL 283
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 133 (51.9 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 50/175 (28%), Positives = 68/175 (38%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS C I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE---C-------IRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ WG N GQLGL D R P ++++ VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALT 258
Score = 123 (48.4 bits), Expect = 0.00087, Sum P(2) = 0.00087
Identities = 39/134 (29%), Positives = 63/134 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I +V G +LA+++ G ++ WG +G + P + +V+VA
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQGSEECIR--VPRNIKSLSDIQIVQVA 143
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAV 192
CG H +AL A E + C WG N GQLGLG D + + P++I++ P+
Sbjct: 144 CGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCQKQTSPQLIKSL-LGIPFM- 193
Query: 193 YEVTCGSFHTALLT 206
+V G H+ +LT
Sbjct: 194 -QVAAGGAHSFVLT 206
Score = 46 (21.3 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 406 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 465
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 466 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 494
L LE +R N G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNEKTGQLIQYDKFYIHEVQELID 626
>UNIPROTKB|E1C514 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:SPAVDFR EMBL:AADN02016126
EMBL:AADN02016127 EMBL:AADN02016128 EMBL:AADN02016129
IPI:IPI00576498 Ensembl:ENSGALT00000016877 ArrayExpress:E1C514
Uniprot:E1C514
Length = 1050
Score = 169 (64.5 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 66/217 (30%), Positives = 96/217 (44%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED Y+ G N GQLG S+ P + T + V CG H+ L+
Sbjct: 51 EDGEVYTCGLNTKGQLGHESEGSK--PAWVGTLAGQH---IVHVACGESHSVALS----- 100
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
D + W G G +GQLG T + A+ VP +K+L Q L + CG +H +++ G
Sbjct: 101 -DQGQVFSW--GAGSDGQLGLTTIEDAVTVPRLIKKLNQQTIL-QISCGNWHCLALAADG 156
Query: 271 DVWSWGMEK----GLGL-CPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
++WG GLG CP+ AS R ++ D I P+ QVA G A
Sbjct: 157 QFFTWGQNSYGQLGLGKECPSQASPQRVKSLDGI-PL---------------AQVAAGGA 200
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H+ ++ G ++ WG+ SG LG D +P V
Sbjct: 201 HSFALSLSG-AVFGWGKNSSGQLGLSDERDRESPCHV 236
Score = 157 (60.3 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 41/121 (33%), Positives = 61/121 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N++GQLGL D R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVSQIACGRHHTLAFVPSSGMIYAF 319
Query: 276 G 276
G
Sbjct: 320 G 320
Score = 132 (51.5 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 43/141 (30%), Positives = 67/141 (47%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW--DFH 125
H +K V GG S+ + G ++ C L +T+G S + P W
Sbjct: 32 HDRNVK--EVACGGNHSVFLLEDGEVY---TCGL---NTKGQLGHESEGS-KPAWVGTLA 82
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETF 184
G +V VACG H VAL G+ + SWGA ++GQLGL E + P++I+
Sbjct: 83 GQHIVHVACGESHSVALSDQGQVF--------SWGAGSDGQLGLTTIEDAVTVPRLIKKL 134
Query: 185 NQDSPWAVYEVTCGSFHTALL 205
NQ + + +++CG++H L
Sbjct: 135 NQQT---ILQISCGNWHCLAL 152
Score = 128 (50.1 bits), Expect = 3.4e-13, Sum P(2) = 3.4e-13
Identities = 43/142 (30%), Positives = 67/142 (47%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G+N GQLG + P VK L +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGKNSSGQLGLSDERDRESPCHVKLLRSQK-VVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G C L + D ++P + G + Q+ACG HT+ ++++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLEL--MGSEVS---QIACGRHHTLAFVPSSGMIYAF 319
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G G LGTG T + P+ V
Sbjct: 320 GCGTRGQLGTGHTCNVKCPSPV 341
Score = 112 (44.5 bits), Expect = 4.2e-11, Sum P(2) = 4.2e-11
Identities = 35/136 (25%), Positives = 66/136 (48%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
I V G S+A+ + G ++ WG S + G + + P + + T+++
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWG----AGSDGQLGLTTIEDAVTVPRLIKKLNQQTILQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 190
++CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ + P
Sbjct: 142 ISCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GIPL 192
Query: 191 AVYEVTCGSFHTALLT 206
A +V G H+ L+
Sbjct: 193 A--QVAAGGAHSFALS 206
Score = 91 (37.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 31/91 (34%), Positives = 39/91 (42%)
Query: 118 PSP-VWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P V+ F H V +VACG H V L+ GE Y C G N GQLG S+
Sbjct: 23 PEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVY-----TC---GLNTKGQLGHESEGSK 74
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
P + T + V CG H+ L+
Sbjct: 75 --PAWVGTLAGQH---IVHVACGESHSVALS 100
>TAIR|locus:2009739 [details] [associations]
symbol:AT1G65920 species:3702 "Arabidopsis thaliana"
[GO:0005543 "phospholipid binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005773 "vacuole" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000306
InterPro:IPR001849 Pfam:PF01363 SMART:SM00064 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872 EMBL:AC009513
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184 InterPro:IPR013591
Pfam:PF08381 PROSITE:PS51514 HSSP:Q15075 HOGENOM:HOG000240974
IPI:IPI00526779 PIR:E96683 RefSeq:NP_176767.1 UniGene:At.35824
ProteinModelPortal:Q9SRZ7 SMR:Q9SRZ7 PaxDb:Q9SRZ7 PRIDE:Q9SRZ7
EnsemblPlants:AT1G65920.1 GeneID:842904 KEGG:ath:AT1G65920
TAIR:At1g65920 InParanoid:Q9SRZ7 OMA:AQADSWF PhylomeDB:Q9SRZ7
ProtClustDB:CLSN2679687 Genevestigator:Q9SRZ7 Uniprot:Q9SRZ7
Length = 1006
Score = 208 (78.3 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 70/226 (30%), Positives = 108/226 (47%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSST--EGGFSLVSSFTPSPVWDFHGH-- 127
+ + SV + A+ +G L++WG D T + G S F + D G
Sbjct: 344 VAVRSVACSDHQTCAVTESGELYLWGI----DGGTIEQSG----SQFLTRKISDVLGGSL 395
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
TV+ VACG+ H + S+G+ + ++G+ G LG G ES +PK +E+ +
Sbjct: 396 TVLSVACGAWHTAIVTSSGQLF--------TYGSGTFGVLGHGSLESVTKPKEVESLRR- 446
Query: 188 SPWAVYEVTCGSFHTALLTH----RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
V V+CG +HTA + RK N +T+G G+ G+LGH ++ LVP
Sbjct: 447 --MKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKRKLVPTC 504
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME-KG-LGLCPNA 287
V EL + + + V CG T +S +G V++ G G LG CP A
Sbjct: 505 VTELIDHDF-IKVSCGWTLTVALSISGTVYTMGSSIHGQLG-CPRA 548
Score = 207 (77.9 bits), Expect = 4.8e-13, Sum P(2) = 4.8e-13
Identities = 66/211 (31%), Positives = 105/211 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH----RKRPN 212
+++G+ G LG G ES +PK +E+ + V V+CG +HTA + RK N
Sbjct: 417 FTYGSGTFGVLGHGSLESVTKPKEVESLRR---MKVISVSCGPWHTAAIVETANDRKFYN 473
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+T+G G+ G+LGH ++ LVP V EL + + + V CG T +S +G V
Sbjct: 474 AKSCGKLFTWGDGDKGRLGHADSKRKLVPTCVTELIDHDF-IKVSCGWTLTVALSISGTV 532
Query: 273 WSWGME-KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
++ G G LG CP A +++ +L GN Q +A G+ H ++T
Sbjct: 533 YTMGSSIHGQLG-CPRAK------DKSVNVVL--GNLTR----QFVKDIASGSHHVAVLT 579
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +++WG+G +G LG G D +P +V
Sbjct: 580 SFG-NVYTWGKGMNGQLGLGDVRDRNSPVLV 609
Score = 138 (53.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 46/136 (33%), Positives = 69/136 (50%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E CW G G +G+LG P++V+ L V + SV C T V+ +G+++ W
Sbjct: 312 EVFCW--GNGNSGKLGLKVNIDIDHPKRVESLED-VAVRSVACSDHQTCAVTESGELYLW 368
Query: 276 GMEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
G++ G + + LTR IS +L G+ + VACGA HT +VT G
Sbjct: 369 GIDGGTIEQSGSQFLTRK-----ISDVL-GGS-------LTVLSVACGAWHTAIVTSSG- 414
Query: 335 KLWSWGRGRSGVLGTG 350
+L+++G G GVLG G
Sbjct: 415 QLFTYGSGTFGVLGHG 430
Score = 47 (21.6 bits), Expect = 3.7e-13, Sum P(2) = 3.7e-13
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 387 KDLEGAEERDEKLSSAMEEMKLLQSKL 413
K E A+E EK +A E +K L SKL
Sbjct: 832 KTWEVAKEEAEKSKAAKEIIKALASKL 858
Score = 40 (19.1 bits), Expect = 2.0e-12, Sum P(2) = 2.0e-12
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 449 DITKEWENMLESADRSKLVR 468
++ K WE E A++SK +
Sbjct: 829 ELDKTWEVAKEEAEKSKAAK 848
>TAIR|locus:504956339 [details] [associations]
symbol:RUG1 "AT5G08710" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
EMBL:BT005498 EMBL:AK118882 IPI:IPI00533904 RefSeq:NP_680156.2
UniGene:At.45869 ProteinModelPortal:Q8GWF2 SMR:Q8GWF2 PRIDE:Q8GWF2
EnsemblPlants:AT5G08710.1 GeneID:830771 KEGG:ath:AT5G08710
TAIR:At5g08710 HOGENOM:HOG000006005 InParanoid:Q8GWF2 OMA:HSACIDE
PhylomeDB:Q8GWF2 ProtClustDB:CLSN2690903 Genevestigator:Q8GWF2
Uniprot:Q8GWF2
Length = 434
Score = 201 (75.8 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 82/302 (27%), Positives = 126/302 (41%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVV 130
I + AG S AI G L+MWG +SS + G ++ P+ V HG T+
Sbjct: 136 ILHISAGYYHSAAITVDGELYMWGK----NSSGQLGLGKKAARVVRVPTKVEALHGITIQ 191
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA GSEH VA+ GE SWG +G+LG G + S I+ + ++ +P
Sbjct: 192 SVALGSEHSVAVTDGGEVL--------SWGGGGSGRLGHGHQSSLFG--ILRSNSEFTPR 241
Query: 191 AVYEVTCGSFHT---ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ E+ G T A L H ++ + FG ++G G ++A P + E+
Sbjct: 242 LIKELE-GIKVTNVAAGLLHSACTDE--NGSAFMFGEKSINKMGFGGVRNATTPSIISEV 298
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL----- 302
P Y V CG +HT VV+ G++++WG + L +++ + P L
Sbjct: 299 P---YAEEVACGGYHTCVVTRGGELYTWGSNENGCLGTDSTYVSHSPVRVEGPFLESTVS 355
Query: 303 -ISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
+S H D G +H D G G LG G +D+ PA
Sbjct: 356 QVSCGWKHTAAISDNNVFTWGWGGSHGTFSVD--------GHSSGGQLGHGSDVDYARPA 407
Query: 360 IV 361
+V
Sbjct: 408 MV 409
Score = 193 (73.0 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 75/260 (28%), Positives = 117/260 (45%)
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLV---CYSWGANNNGQLGLGDRESRLRPKII 181
H ++V+ G + + +SAG + V Y WG N++GQLGLG + +R+ ++
Sbjct: 122 HAMDPLEVS-GLDKDILHISAGYYHSAAITVDGELYMWGKNSSGQLGLGKKAARV-VRVP 179
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-------- 233
+ V GS H+ +T D E + W G G +G+LGHG
Sbjct: 180 TKVEALHGITIQSVALGSEHSVAVT------DGGEVLSW--GGGGSGRLGHGHQSSLFGI 231
Query: 234 -TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
+ S P +KEL + + + +V GL H++ G + +G EK + + RN
Sbjct: 232 LRSNSEFTPRLIKEL-EGIKVTNVAAGLLHSACTDENGSAFMFG-EKSINKMGFGGV-RN 288
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
A +P +IS P+ +VACG HT +VT G +L++WG +G LGT T
Sbjct: 289 ----ATTPSIIS-EVPYAE------EVACGGYHTCVVTRGG-ELYTWGSNENGCLGTDST 336
Query: 353 IDFFAPAIVLWPPLTEEFKQ 372
+P V P L Q
Sbjct: 337 YVSHSPVRVEGPFLESTVSQ 356
Score = 171 (65.3 bits), Expect = 9.2e-10, P = 9.2e-10
Identities = 88/322 (27%), Positives = 128/322 (39%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIG--APDSLEDDSKTNHKAPIKICSVKAGG 81
Y S +DG+L G NS L +G A + +K I I SV G
Sbjct: 144 YHSAAITVDGELYMWGKNS------SGQLGLGKKAARVVRVPTKVEALHGITIQSVALGS 197
Query: 82 MMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLV---SSFTPSPVWDFHGHTVVKVACG 135
S+A+ + G + WG + L F ++ S FTP + + G V VA G
Sbjct: 198 EHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEGIKVTNVAAG 257
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H SA G + +G + ++G G + P II + P+A EV
Sbjct: 258 LLH-----SACTDENGS---AFMFGEKSINKMGFGGVRNATTPSIIS----EVPYAE-EV 304
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CG +HT ++T R ++ +T+G ENG LG +T + P +V E P VS
Sbjct: 305 ACGGYHTCVVT---RGGEL-----YTWGSNENGCLGTDSTYVSHSPVRV-EGPFLESTVS 355
Query: 256 -VDCGLFHTSVVSSAGD-VWSWGMEKGL----GLCPNASLTRNEAGDAISPILISGNGPH 309
V CG HT+ +S W WG G G L D P ++
Sbjct: 356 QVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARPAMVD----L 411
Query: 310 GPKFQDPVQVACGAAHTVLVTD 331
G + V ++CG HT V +
Sbjct: 412 GKNVR-AVHISCGFNHTAAVLE 432
Score = 142 (55.0 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 39/133 (29%), Positives = 66/133 (49%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG+ + G+LGLG+ +S+ P + + S + V CG HT LT +R
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHS---ITAVACGGAHTLFLTETRR-------- 102
Query: 219 CWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+ GL + GQLG +S A+ P +V L + + +S G +H++ ++ G+++ WG
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISA--GYYHSAAITVDGELYMWGK 160
Query: 278 EKG--LGLCPNAS 288
LGL A+
Sbjct: 161 NSSGQLGLGKKAA 173
>UNIPROTKB|E1BAV2 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0007283 GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:DAAA02061808 EMBL:DAAA02061809 EMBL:DAAA02061810
IPI:IPI00839181 RefSeq:NP_001070362.2 UniGene:Bt.15687
Ensembl:ENSBTAT00000018639 GeneID:533336 KEGG:bta:533336
NextBio:20876005 ArrayExpress:E1BAV2 Uniprot:E1BAV2
Length = 1057
Score = 208 (78.3 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 68/213 (31%), Positives = 105/213 (49%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 212 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 271 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
+V+ WG K G LGL + + +A SP LI G F +Q+A G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGLGIDC---KKQA----SPQLIKSL--LGIPF---MQIAAGGAHSFV 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 188 (71.2 bits), Expect = 6.7e-11, Sum P(2) = 6.7e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVY-ICCGEDHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 143 (55.4 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLD---- 51
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 272 VWSWGMEKG--LGL 283
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 130 (50.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 39/153 (25%), Positives = 60/153 (39%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+G+ + + + I+I V G SLA+ A ++ WG G
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCK 176
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+P + G +++A G H L +G + WG N GQLGL D
Sbjct: 177 KQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDEN 228
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
R P ++++ VY + CG HTA LT
Sbjct: 229 DRYVPNLLKSLRTQK--IVY-ICCGEDHTAALT 258
Score = 126 (49.4 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 47/156 (30%), Positives = 68/156 (43%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N I+P + G Q+ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSAFVPSSGRIYSF 319
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEEFKQD 373
G G +G LGTG T + +P V W P + D
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPD 355
Score = 121 (47.7 bits), Expect = 4.3e-12, Sum P(3) = 4.3e-12
Identities = 42/138 (30%), Positives = 67/138 (48%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG DS +G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + C WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P+ ++ G H+ +LT
Sbjct: 191 PFM--QIAAGGAHSFVLT 206
Score = 109 (43.4 bits), Expect = 7.0e-11, Sum P(3) = 7.0e-11
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLLGSEECIR 126
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 2.9e-08, Sum P(3) = 2.9e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 47 (21.6 bits), Expect = 4.3e-13, Sum P(2) = 4.3e-13
Identities = 21/93 (22%), Positives = 43/93 (46%)
Query: 406 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 465
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 466 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 494
L LE +R N +G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNEKSGQIIQYDKFYIHEVQELID 626
>TAIR|locus:505006603 [details] [associations]
symbol:AT5G12350 "AT5G12350" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009630 "gravitropism" evidence=RCA]
[GO:0009887 "organ morphogenesis" evidence=RCA] [GO:0009888 "tissue
development" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0010638 "positive regulation of
organelle organization" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0042546 "cell wall
biogenesis" evidence=RCA] [GO:0044036 "cell wall macromolecule
metabolic process" evidence=RCA] [GO:0045492 "xylan biosynthetic
process" evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 SMART:SM00064
SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886
GO:GO:0005938 EMBL:CP002688 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 IPI:IPI00540281 RefSeq:NP_568268.3 UniGene:At.22310
UniGene:At.51056 ProteinModelPortal:F4K0X5 SMR:F4K0X5
EnsemblPlants:AT5G12350.1 GeneID:831110 KEGG:ath:AT5G12350
OMA:NTNGHPR Uniprot:F4K0X5
Length = 1075
Score = 207 (77.9 bits), Expect = 4.5e-13, P = 4.5e-13
Identities = 69/225 (30%), Positives = 106/225 (47%)
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
T +GE +SWG + G+LG G + +PK+I+ N + + V CG FH+ +T
Sbjct: 324 TKQGES---FSWGEESEGRLGHGVDSNIQQPKLIDALNTTN---IELVACGEFHSCAVT- 376
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
L +T+G G+ G LGHG S VP++V L + +++ S+ CG +HT+VV+
Sbjct: 377 -------LSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACGPYHTAVVT 429
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
SAG ++++G + G+ + GD S + I K V+ ACG HT
Sbjct: 430 SAGQLFTFG-DGTFGVLGH--------GDKKS-VFIPRE-VDSLKGLRTVRAACGVWHTA 478
Query: 328 LVTD-----------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V + KL++WG G G LG G P V
Sbjct: 479 AVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCV 523
Score = 179 (68.1 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 71/288 (24%), Positives = 114/288 (39%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + S+ G + + +AG L+ +G+ G S F P V G V+
Sbjct: 413 IHVSSIACGPYHTAVVTSAGQLFTFGDGTF---GVLGHGDKKSVFIPREVDSLKGLRTVR 469
Query: 132 VACGSEHVVALVSA--GETYKGE--DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
ACG H A+V G + ++WG + G+LG G++E +L P + +
Sbjct: 470 AACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEP 529
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +V CG T LT +T G GQLG+ P +V+
Sbjct: 530 N---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGNSHADGK-TPNRVEGK 577
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + CG +H +V++S +V++WG KG N L + D SP L+
Sbjct: 578 LHKSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDVDDRNSPTLVESL- 630
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
K + +ACG T V W+ G +S G + F
Sbjct: 631 ----KDKQVKSIACGTNFTAAVC---IHRWASGMDQSMCSGCRQPFSF 671
Score = 178 (67.7 bits), Expect = 6.6e-10, P = 6.6e-10
Identities = 56/209 (26%), Positives = 98/209 (46%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPN 212
+++G G LG GD++S P+ +++ CG +HTA ++ +
Sbjct: 435 FTFGDGTFGVLGHGDKKSVFIPREVDSLKG---LRTVRAACGVWHTAAVVEVMVGSSSSS 491
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ +T+G G+ G+LGHG + LVP V L + + V CG T ++++G V
Sbjct: 492 NCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPNFC-QVACGHSLTVALTTSGHV 550
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
++ G P N D +P + G H F + ++ACGA H ++T
Sbjct: 551 YTMGS-------PVYGQLGNSHADGKTPNRVEGK-LH-KSFVE--EIACGAYHVAVLTSR 599
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++++WG+G +G LG G D +P +V
Sbjct: 600 T-EVYTWGKGSNGRLGHGDVDDRNSPTLV 627
Score = 169 (64.5 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 56/205 (27%), Positives = 92/205 (44%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G S A+ +G L+ WG D G + VS + P V + G V +ACG
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGK---GDFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 421
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ + ++G G LG GD++S P+ +++
Sbjct: 422 PYHTAVVTSAGQLF--------TFGDGTFGVLGHGDKKSVFIPREVDSLKG---LRTVRA 470
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V L +
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+ V CG T ++++G V++ G
Sbjct: 531 FC-QVACGHSLTVALTTSGHVYTMG 554
>TAIR|locus:2076889 [details] [associations]
symbol:AT3G02510 "AT3G02510" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0005886 "plasma membrane"
evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
[GO:0008536 "Ran GTPase binding" evidence=ISS] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002686 GenomeReviews:BA000014_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.20016
UniGene:At.41128 EMBL:AK227929 IPI:IPI00539921 RefSeq:NP_186900.3
UniGene:At.70614 ProteinModelPortal:Q0WSJ9 SMR:Q0WSJ9 PRIDE:Q0WSJ9
EnsemblPlants:AT3G02510.1 GeneID:821100 KEGG:ath:AT3G02510
TAIR:At3g02510 OMA:NGGVQCW PhylomeDB:Q0WSJ9 Genevestigator:Q2V3Z2
Uniprot:Q0WSJ9
Length = 393
Score = 170 (64.9 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 50/185 (27%), Positives = 88/185 (47%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLG+G E + ++E P++V V GS ++ + +
Sbjct: 9 AWGSGEDGQLGIGTNEEKEWACVVEALE---PYSVRSVVSGSRNSLAICD--------DG 57
Query: 218 MCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ +P +VK L V + G +H V G ++WG
Sbjct: 58 TMFTWGWNQRGTLGHQPETKTENIPSRVKALAN-VKITQAAIGGWHCLAVDDQGRAYAWG 116
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ G C L ++E G + ++ PK QVA G H+V++T +G+ +
Sbjct: 117 GNE-YGQCGEEPL-KDEMGRPVRRDIVIPKRC-APKLTVR-QVAAGGTHSVVLTREGH-V 171
Query: 337 WSWGR 341
W+WG+
Sbjct: 172 WTWGQ 176
Score = 165 (63.1 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 48/159 (30%), Positives = 75/159 (47%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ G +LA++ G L WGN T G + +S P PV T+V +A G
Sbjct: 201 IAVGAFHNLALEEDGRLLAWGNNEYGQLGT--GDTQPTSH-PVPVQGLDDLTLVDIAAGG 257
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE--SRLRPKIIETFNQDSPWAVYE 194
H AL GE Y WG +G+LGLGD + S++ P+ + ++ + +
Sbjct: 258 WHSTALTDKGEVY--------GWGRGEHGRLGLGDNDKSSKMVPQKVNLLAEED---IIQ 306
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
V+CG H+ LT R ++FG G++G+LG+G
Sbjct: 307 VSCGGTHSVALTRDGR--------IFSFGRGDHGRLGYG 337
Score = 156 (60.0 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 51/165 (30%), Positives = 77/165 (46%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+ W G E GQLG G TQ P V+ L LV + G +H++ ++ G+V+ WG
Sbjct: 218 LAW--GNNEYGQLGTGDTQPTSHPVPVQGLDDLT-LVDIAAGGWHSTALTDKGEVYGWGR 274
Query: 278 -EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
E G L N+ + P ++ +D +QV+CG H+V +T DG ++
Sbjct: 275 GEHG-----RLGLGDNDKSSKMVPQKVNLLAE-----EDIIQVSCGGTHSVALTRDG-RI 323
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAI--VLWPPLTEEFKQ-DELNTG 378
+S+GRG G LG G+ + P + PP F DE G
Sbjct: 324 FSFGRGDHGRLGYGRKVTTGQPLELPIKIPPPEGSFNHTDEEEEG 368
Score = 142 (55.0 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 61/227 (26%), Positives = 102/227 (44%)
Query: 118 PSPVWDFHGHTV-VKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRE 173
P P D +V V+V G E+V L++ G + ED +WG N GQLG GD +
Sbjct: 177 PWPPGDIKQISVPVRVQ-GLENV-RLIAVGAFHNLALEEDGRLLAWGNNEYGQLGTGDTQ 234
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ + + ++ G +H+ LT D E W G GE+G+LG G
Sbjct: 235 PTSHPVPVQGLDD---LTLVDIAAGGWHSTALT------DKGEVYGW--GRGEHGRLGLG 283
Query: 234 TTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
S +VP++V L + ++ V CG H+ ++ G ++S+G L +T
Sbjct: 284 DNDKSSKMVPQKVNLLAEED-IIQVSCGGTHSVALTRDGRIFSFGRGDHGRLGYGRKVTT 342
Query: 292 NEAGDAISPILI---SGNGPHGPKFQD----PVQVACGAAHTVLVTD 331
+ + PI I G+ H + ++ +ACG HT+ + +
Sbjct: 343 GQPLEL--PIKIPPPEGSFNHTDEEEEGKWSAKSIACGGRHTLAIVE 387
Score = 89 (36.4 bits), Expect = 4.6e-13, Sum P(2) = 4.6e-13
Identities = 47/177 (26%), Positives = 65/177 (36%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L IG + E P + SV +G SLAI + G ++ WG T G
Sbjct: 18 LGIGTNEEKEWACVVEALEPYSVRSVVSGSRNSLAICDDGTMFTWG---WNQRGTLGHQP 74
Query: 112 LVSSFT-PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG-- 168
+ PS V + + A G H +A+ G Y +WG N GQ G
Sbjct: 75 ETKTENIPSRVKALANVKITQAAIGGWHCLAVDDQGRAY--------AWGGNEYGQCGEE 126
Query: 169 -LGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
L D R +R I+ V +V G H+ +LT E WT+G
Sbjct: 127 PLKDEMGRPVRRDIVIPKRCAPKLTVRQVAAGGTHSVVLTR--------EGHVWTWG 175
Score = 76 (31.8 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+A GA H + + +DG +L +WG G LGTG T
Sbjct: 201 IAVGAFHNLALEEDG-RLLAWGNNEYGQLGTGDT 233
Score = 60 (26.2 bits), Expect = 4.6e-10, Sum P(2) = 4.6e-10
Identities = 24/78 (30%), Positives = 33/78 (42%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP + + V AGG S+ + G +W WG P P G +S P V
Sbjct: 147 APKLTVRQVAAGGTHSVVLTREGHVWTWGQ-PWPP----GDIKQIS--VPVRVQGLEN-- 197
Query: 129 VVKVACGSEHVVALVSAG 146
V +A G+ H +AL G
Sbjct: 198 VRLIAVGAFHNLALEEDG 215
>UNIPROTKB|Q74AS9 [details] [associations]
symbol:GSU2272 "ATS1 domain repeat lipoprotein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 198 (74.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 83/290 (28%), Positives = 125/290 (43%)
Query: 25 TSLNCCMDGQLGFSGSNSLV-PC-----VIEQFLTI---GAPDS--LEDDSKTNHKAPIK 73
T L+ C DG L +S S S+ P V + T+ G +S L D + T+ P +
Sbjct: 17 TLLSACADGDLPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKR 76
Query: 74 I--------CSVKAGGMMSLAI---DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW 122
+ G +LAI DN + WG+ + ++ +S TP +
Sbjct: 77 LRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPA-TVPTSSTPVKIG 135
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES--RLRPKI 180
F G V +VA G H +AL AG T ++WG+N+ GQL L S R P+
Sbjct: 136 GFGG-AVQQVAAGGLHSMAL--AGGTV-------WAWGSNSAGQLALNPISSATRFAPRQ 185
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
+ET P A + G H+ T E+ W G +GQLG+GTT S +
Sbjct: 186 VETAKL--PIAPTAIVAGGSHSIAYTST-------EAYAW--GNNASGQLGNGTTLSNHM 234
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
P++V +LP + + + G H + S G +W+WG G N + T
Sbjct: 235 PQKV-QLPSSITIRKISAGGSHNLALDSTGAIWAWG-SNAYGQLGNGTTT 282
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 64/210 (30%), Positives = 97/210 (46%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N +GQLG G S P+ ++ S + +++ G H L D
Sbjct: 214 YAWGNNASGQLGNGTTLSNHMPQKVQL---PSSITIRKISAGGSHNLAL-------DSTG 263
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSW 275
++ W +G GQLG+GTT + P Q+ LP V + V G H+ V+S V++W
Sbjct: 264 AI-WAWGSNAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTW 321
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC-GAAHTVLVTDDGY 334
G LGL L+ GD +SP + + + P F D +V G+ T++ +
Sbjct: 322 GFNT-LGL-----LSVGTTGDQLSPAQVR-DASNVP-FTDVERVVLLGSFFTIVKKNGSG 373
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+W+WG G LG G T + AP V P
Sbjct: 374 GMWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 56/185 (30%), Positives = 82/185 (44%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-NC--PLPDSSTEGGFSLVSSFTPSPV 121
K + I I + AGG +LA+D+ GA+W WG N L + +T + V P+ V
Sbjct: 237 KVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGV 296
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
F + V G H VA+ S + Y+WG N G L +G +L P +
Sbjct: 297 TGF-----IDVFAGPSHSVAVAS--------NFTVYTWGFNTLGLLSVGTTGDQLSPAQV 343
Query: 182 ETFNQDSPWAVYE--VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ + P+ E V GSF T + +K + + W +G GQLG GTT +
Sbjct: 344 RDAS-NVPFTDVERVVLLGSFFTIV---KKNGSGGM----WAWGYNGYGQLGDGTTSNRT 395
Query: 240 VPEQV 244
P QV
Sbjct: 396 APVQV 400
>TIGR_CMR|GSU_2272 [details] [associations]
symbol:GSU_2272 "lipoprotein, putative" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 RefSeq:NP_953321.1
ProteinModelPortal:Q74AS9 GeneID:2686981 KEGG:gsu:GSU2272
PATRIC:22027399 HOGENOM:HOG000020996 OMA:TGTALAW
BioCyc:GSUL243231:GH27-2248-MONOMER Uniprot:Q74AS9
Length = 403
Score = 198 (74.8 bits), Expect = 7.3e-13, P = 7.3e-13
Identities = 83/290 (28%), Positives = 125/290 (43%)
Query: 25 TSLNCCMDGQLGFSGSNSLV-PC-----VIEQFLTI---GAPDS--LEDDSKTNHKAPIK 73
T L+ C DG L +S S S+ P V + T+ G +S L D + T+ P +
Sbjct: 17 TLLSACADGDLPYSDSTSISSPAYSHSAVFQNMTTLAVWGNNESGQLGDGTTTSAATPKR 76
Query: 74 I--------CSVKAGGMMSLAI---DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW 122
+ G +LAI DN + WG+ + ++ +S TP +
Sbjct: 77 LRLGFATYSSGFATGASHTLAIARFDNVSGVRAWGSNSAGQIGRDPA-TVPTSSTPVKIG 135
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES--RLRPKI 180
F G V +VA G H +AL AG T ++WG+N+ GQL L S R P+
Sbjct: 136 GFGG-AVQQVAAGGLHSMAL--AGGTV-------WAWGSNSAGQLALNPISSATRFAPRQ 185
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
+ET P A + G H+ T E+ W G +GQLG+GTT S +
Sbjct: 186 VETAKL--PIAPTAIVAGGSHSIAYTST-------EAYAW--GNNASGQLGNGTTLSNHM 234
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
P++V +LP + + + G H + S G +W+WG G N + T
Sbjct: 235 PQKV-QLPSSITIRKISAGGSHNLALDSTGAIWAWG-SNAYGQLGNGTTT 282
Score = 187 (70.9 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 64/210 (30%), Positives = 97/210 (46%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N +GQLG G S P+ ++ S + +++ G H L D
Sbjct: 214 YAWGNNASGQLGNGTTLSNHMPQKVQL---PSSITIRKISAGGSHNLAL-------DSTG 263
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSW 275
++ W +G GQLG+GTT + P Q+ LP V + V G H+ V+S V++W
Sbjct: 264 AI-WAWGSNAYGQLGNGTTTNQSTPVQLT-LPAGVTGFIDVFAGPSHSVAVASNFTVYTW 321
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC-GAAHTVLVTDDGY 334
G LGL L+ GD +SP + + + P F D +V G+ T++ +
Sbjct: 322 GFNT-LGL-----LSVGTTGDQLSPAQVR-DASNVP-FTDVERVVLLGSFFTIVKKNGSG 373
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+W+WG G LG G T + AP V P
Sbjct: 374 GMWAWGYNGYGQLGDGTTSNRTAPVQVALP 403
Score = 158 (60.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 56/185 (30%), Positives = 82/185 (44%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-NC--PLPDSSTEGGFSLVSSFTPSPV 121
K + I I + AGG +LA+D+ GA+W WG N L + +T + V P+ V
Sbjct: 237 KVQLPSSITIRKISAGGSHNLALDSTGAIWAWGSNAYGQLGNGTTTNQSTPVQLTLPAGV 296
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
F + V G H VA+ S + Y+WG N G L +G +L P +
Sbjct: 297 TGF-----IDVFAGPSHSVAVAS--------NFTVYTWGFNTLGLLSVGTTGDQLSPAQV 343
Query: 182 ETFNQDSPWAVYE--VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ + P+ E V GSF T + +K + + W +G GQLG GTT +
Sbjct: 344 RDAS-NVPFTDVERVVLLGSFFTIV---KKNGSGGM----WAWGYNGYGQLGDGTTSNRT 395
Query: 240 VPEQV 244
P QV
Sbjct: 396 APVQV 400
>UNIPROTKB|I3LT85 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051225 "spindle assembly" evidence=IEA] [GO:0042393
"histone binding" evidence=IEA] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0031492 "nucleosomal DNA binding" evidence=IEA]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0000794 "condensed
nuclear chromosome" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0007088 GO:GO:0007059 GO:GO:0007052 GO:GO:0051225
GO:GO:0000082 GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 OMA:GTESCFV EMBL:FP565629 RefSeq:XP_003482053.1
Ensembl:ENSSSCT00000028011 GeneID:100621543 KEGG:ssc:100621543
Uniprot:I3LT85
Length = 421
Score = 198 (74.8 bits), Expect = 8.2e-13, P = 8.2e-13
Identities = 99/352 (28%), Positives = 147/352 (41%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ G +++WG+ D++ G
Sbjct: 99 LGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIG 154
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETY---KGEDLVCY---SWGANN 163
L+ S PV VVKVA G++H+V L + GE Y GE AN
Sbjct: 155 LLEPMKKSMVPVQVQLSMPVVKVASGNDHLVMLTADGELYTLGSGEQGQLGRVPELFANR 214
Query: 164 NGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWT 221
G+ GL E L PK + ++ S V + CG++ T ++ E +
Sbjct: 215 GGRQGL---ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISS--------EGHVYG 263
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EK 279
FGL QLG T+S VP+ + V G HT + S G +S G E
Sbjct: 264 FGLSNYHQLGTPGTESCFVPQNLTSFKNSTKSWVRFSGGQHHTVCMDSEGRAYSLGRAEY 323
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LGL A + P LIS + VACGA+ VT DG ++++
Sbjct: 324 GRLGLGEGAE-------EKSVPTLIS-------RLPAVSSVACGASVGYAVTKDG-RVFA 368
Query: 339 WGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
WG G + LGTG+ D ++P + L +++GG + KD E
Sbjct: 369 WGMGTNYQLGTGQEEDAWSPVEMTGKQLENRMVLS-VSSGGQHTVLLVKDKE 419
>UNIPROTKB|E2RFW5 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 EMBL:AAEX03002773
GeneID:479225 KEGG:cfa:479225 RefSeq:XP_536367.2
Ensembl:ENSCAFT00000021404 Uniprot:E2RFW5
Length = 1049
Score = 209 (78.6 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 69/213 (32%), Positives = 105/213 (49%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 212 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 271 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
+V+ WG K G LGL + + +A SP LI G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGLGIDC---KKQA----SPQLIKSL--LGIPF---MQVAAGGAHSFV 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 188 (71.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVY-ICCGEDHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 143 (55.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLD---- 51
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 272 VWSWGMEKG--LGL 283
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 131 (51.2 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 40/153 (26%), Positives = 60/153 (39%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+G+ + + + I+I V G SLA+ A ++ WG G
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCK 176
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+P + G ++VA G H L +G + WG N GQLGL D
Sbjct: 177 KQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDEN 228
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
R P ++++ VY + CG HTA LT
Sbjct: 229 DRYVPNLLKSLRTQK--IVY-ICCGEDHTAALT 258
Score = 126 (49.4 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 47/156 (30%), Positives = 68/156 (43%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N I+P + G Q+ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSAFVPSSGRIYSF 319
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEEFKQD 373
G G +G LGTG T + +P V W P + D
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPD 355
Score = 122 (48.0 bits), Expect = 8.4e-12, Sum P(3) = 8.4e-12
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG DS +G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + C WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P+ +V G H+ +LT
Sbjct: 191 PFM--QVAAGGAHSFVLT 206
Score = 109 (43.4 bits), Expect = 1.7e-10, Sum P(3) = 1.7e-10
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLLGSEECIR 126
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 7.1e-08, Sum P(3) = 7.1e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 43 (20.2 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 20/93 (21%), Positives = 42/93 (45%)
Query: 406 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 465
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 466 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 494
L LE ++ N G ++ DK +QE+++
Sbjct: 594 LKVLEILHKVNEKTGQIIQYDKFYIHEVQELID 626
>UNIPROTKB|E2RFV1 [details] [associations]
symbol:HERC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:26091 KO:K10615 OMA:KLVIQPT
EMBL:AAEX03002773 RefSeq:XP_849808.1 Ensembl:ENSCAFT00000021413
GeneID:479225 KEGG:cfa:479225 NextBio:20854436 Uniprot:E2RFV1
Length = 1057
Score = 209 (78.6 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 69/213 (32%), Positives = 105/213 (49%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 212 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 271 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
+V+ WG K G LGL + + +A SP LI G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGLGIDC---KKQA----SPQLIKSL--LGIPF---MQVAAGGAHSFV 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 188 (71.2 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK--IVY-ICCGEDHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSGRIYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 143 (55.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLD---- 51
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 272 VWSWGMEKG--LGL 283
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 131 (51.2 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 40/153 (26%), Positives = 60/153 (39%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+G+ + + + I+I V G SLA+ A ++ WG G
Sbjct: 119 LGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCK 176
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+P + G ++VA G H L +G + WG N GQLGL D
Sbjct: 177 KQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDEN 228
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
R P ++++ VY + CG HTA LT
Sbjct: 229 DRYVPNLLKSLRTQK--IVY-ICCGEDHTAALT 258
Score = 126 (49.4 bits), Expect = 8.6e-12, Sum P(3) = 8.6e-12
Identities = 47/156 (30%), Positives = 68/156 (43%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG VP +K L + +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSL-RTQKIVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N I+P + G Q+ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TQIACGRQHTSAFVPSSGRIYSF 319
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL--WPPLTEEFKQD 373
G G +G LGTG T + +P V W P + D
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWFPYNGQCPPD 355
Score = 122 (48.0 bits), Expect = 8.6e-12, Sum P(3) = 8.6e-12
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG DS +G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + C WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P+ +V G H+ +LT
Sbjct: 191 PFM--QVAAGGAHSFVLT 206
Score = 109 (43.4 bits), Expect = 1.8e-10, Sum P(3) = 1.8e-10
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLLGSEECIR 126
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 7.3e-08, Sum P(3) = 7.3e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 43 (20.2 bits), Expect = 8.6e-13, Sum P(2) = 8.6e-13
Identities = 20/93 (21%), Positives = 42/93 (45%)
Query: 406 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 465
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 466 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 494
L LE ++ N G ++ DK +QE+++
Sbjct: 594 LKVLEILHKVNEKTGQIIQYDKFYIHEVQELID 626
>UNIPROTKB|Q5GLZ8 [details] [associations]
symbol:HERC4 "Probable E3 ubiquitin-protein ligase HERC4"
species:9606 "Homo sapiens" [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0007283
"spermatogenesis" evidence=ISS] Pfam:PF00632 InterPro:IPR000569
PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0030154 GO:GO:0007283 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 HOGENOM:HOG000208452
HOVERGEN:HBG050878 EMBL:AY221963 EMBL:AY650032 EMBL:AY650033
EMBL:AY650034 EMBL:AB046813 EMBL:AL356741 EMBL:AC024258
EMBL:AL133551 EMBL:BC039600 IPI:IPI00333067 IPI:IPI00552050
IPI:IPI00604497 IPI:IPI00827523 IPI:IPI00827948 IPI:IPI00827992
RefSeq:NP_056416.2 RefSeq:NP_071362.1 UniGene:Hs.51891 HSSP:Q9UEP9
ProteinModelPortal:Q5GLZ8 SMR:Q5GLZ8 IntAct:Q5GLZ8 STRING:Q5GLZ8
PhosphoSite:Q5GLZ8 DMDM:74707832 PaxDb:Q5GLZ8 PRIDE:Q5GLZ8
DNASU:26091 Ensembl:ENST00000277817 Ensembl:ENST00000373700
Ensembl:ENST00000395187 Ensembl:ENST00000395198
Ensembl:ENST00000412272 Ensembl:ENST00000473533
Ensembl:ENST00000492996 GeneID:26091 KEGG:hsa:26091 UCSC:uc001jng.4
UCSC:uc001jnh.4 UCSC:uc001jnk.3 UCSC:uc009xpr.3 CTD:26091
GeneCards:GC10M069681 HGNC:HGNC:24521 HPA:HPA045453 MIM:609248
neXtProt:NX_Q5GLZ8 PharmGKB:PA134949021 InParanoid:Q5GLZ8 KO:K10615
ChiTaRS:HERC4 GenomeRNAi:26091 NextBio:48027 ArrayExpress:Q5GLZ8
Bgee:Q5GLZ8 CleanEx:HS_HERC4 Genevestigator:Q5GLZ8 Uniprot:Q5GLZ8
Length = 1057
Score = 207 (77.9 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 65/213 (30%), Positives = 102/213 (47%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L
Sbjct: 51 DDGTVYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------ 99
Query: 212 NDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
ND + W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A
Sbjct: 100 NDKGQVYAW--GLDSDGQLGLVGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKAS 156
Query: 271 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
+V+ WG K G LGL + + + +L G F +QVA G AH+ +
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLL-------GIPF---MQVAAGGAHSFV 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T G ++ WGR + G LG D + P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 189 (71.6 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 53/151 (35%), Positives = 72/151 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLGL D R P ++++ VY + CG HTA LT E
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK--IVY-ICCGEDHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
+TFG G GQLGH +T + P +V EL + + + CG HTS V S+G ++S+
Sbjct: 261 GGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSGRIYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G LG N L + SP + GN
Sbjct: 320 G----LG--GNGQLGTGSTSNRKSPFTVKGN 344
Score = 142 (55.0 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 46/134 (34%), Positives = 65/134 (48%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
++C WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 1 MLC--WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFVLD---- 51
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +T G + GQLGH +S PEQV L +V+V CG HT ++ G
Sbjct: 52 ----DGTVYTCGCNDLGQLGH--EKSRKKPEQVVALDAQ-NIVAVSCGEAHTLALNDKGQ 104
Query: 272 VWSWGMEKG--LGL 283
V++WG++ LGL
Sbjct: 105 VYAWGLDSDGQLGL 118
Score = 129 (50.5 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 40/153 (26%), Positives = 60/153 (39%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+G+ + + + I+I V G SLA+ A ++ WG G
Sbjct: 119 VGSEECIRVPRNIKSLSDIQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GTDCK 176
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+P + G ++VA G H L +G + WG N GQLGL D
Sbjct: 177 KQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDEN 228
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
R P ++++ VY + CG HTA LT
Sbjct: 229 DRYVPNLLKSLRSQK--IVY-ICCGEDHTAALT 258
Score = 123 (48.4 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 43/138 (31%), Positives = 67/138 (48%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG DS +G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWGL----DS--DGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + C WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF------C--WGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P+ +V G H+ +LT
Sbjct: 191 PFM--QVAAGGAHSFVLT 206
Score = 123 (48.4 bits), Expect = 9.0e-12, Sum P(3) = 9.0e-12
Identities = 45/148 (30%), Positives = 65/148 (43%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG VP +K L +V + CG HT+ ++ G V+++G
Sbjct: 212 FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK-IVYICCGEDHTAALTKEGGVFTFGAG- 269
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N I+P + G ++ACG HT +++S+
Sbjct: 270 GYG-----QLGHNSTSHEINPRKVFEL--MGSIV---TEIACGRQHTSAFVPSSGRIYSF 319
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL--WPP 365
G G +G LGTG T + +P V W P
Sbjct: 320 GLGGNGQLGTGSTSNRKSPFTVKGNWYP 347
Score = 110 (43.8 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 31/104 (29%), Positives = 48/104 (46%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V +V V+CG H +AL G+ Y +WG +++GQLGL E +R
Sbjct: 75 PEQVVALDAQNIVAVSCGEAHTLALNDKGQVY--------AWGLDSDGQLGLVGSEECIR 126
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
P+ I++ S + +V CG +H+ L+ E CW
Sbjct: 127 VPRNIKSL---SDIQIVQVACGYYHSLALSKAS------EVFCW 161
Score = 83 (34.3 bits), Expect = 9.6e-08, Sum P(3) = 9.6e-08
Identities = 31/113 (27%), Positives = 43/113 (38%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G Y
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVY-----T 57
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
C G N+ GQLG +SR +P+ + + + + V+CG HT L +
Sbjct: 58 C---GCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLALNDK 102
Score = 45 (20.9 bits), Expect = 8.9e-13, Sum P(2) = 8.9e-13
Identities = 21/93 (22%), Positives = 42/93 (45%)
Query: 406 MKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK 465
+ L ++ L V+E + S+L +F K +++ + L + I + S +
Sbjct: 534 VNLEKAPLKVLENWWSVLEPPLFLKIVELFKEVVVHLLKLYKIGIPPSERRIFNSFLHTA 593
Query: 466 LVRLERFYR-NMLAG--VK-DKLMKRRIQEIVN 494
L LE +R N G ++ DK +QE+++
Sbjct: 594 LKVLEILHRVNEKMGQIIQYDKFYIHEVQELID 626
>RGD|1307803 [details] [associations]
symbol:Herc3 "HECT and RLD domain containing E3 ubiquitin
protein ligase 3" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0005737 "cytoplasm" evidence=ISO;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 RGD:1307803
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 EMBL:CH474011 IPI:IPI00568958 UniGene:Rn.203362
Ensembl:ENSRNOT00000009694 UCSC:RGD:1307803 Uniprot:D3ZYI2
Length = 909
Score = 162 (62.1 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 46/129 (35%), Positives = 66/129 (51%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG NN GQLGL D + R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT ++V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSVNDEVNPRRVLEL-MGSEVTQIACGRQHTLALVPSSGLIYAF 319
Query: 276 GM-EKG-LG 282
G KG LG
Sbjct: 320 GCGAKGQLG 328
Score = 157 (60.3 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 63/213 (29%), Positives = 92/213 (43%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED Y+ G N GQLG +RE +P+ I + V CG H+ L+ R
Sbjct: 51 EDGEVYTCGVNTKGQLG-HEREGN-KPEQIGALADQH---IIHVACGESHSLALSDR--- 102
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+++G G +GQLG TT+ S VP +++L Q L V CG +H +++ G
Sbjct: 103 -----GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTIL-QVSCGNWHCLALAADG 156
Query: 271 DVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
++WG G LGL E SP + G QVA G AH+
Sbjct: 157 QFFTWGKNSHGQLGL-------GKEFPSQTSPQRV--RSLEGIPL---AQVAAGGAHSFA 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ G ++ WG +G LG D +P V
Sbjct: 205 LSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 131 (51.2 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 43/143 (30%), Positives = 69/143 (48%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 280 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C L + D ++P ++ G + Q+ACG HT+ + +++
Sbjct: 269 --GSC--GQLGHDSVNDEVNPRRVLELMG------SEVTQIACGRQHTLALVPSSGLIYA 318
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G G LGTG T + P+ V
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 87 (35.7 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 27/81 (33%), Positives = 37/81 (45%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY-----TC---GVNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 188 SPWAVYEVTCGSFHTALLTHR 208
+ V CG H+ L+ R
Sbjct: 85 H---IIHVACGESHSLALSDR 102
>UNIPROTKB|Q74DR4 [details] [associations]
symbol:GSU1251 "ATS1 domain repeat protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 92/349 (26%), Positives = 141/349 (40%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNH-KAPIKICSVKAGGMMSLAIDNA 90
DG L G NS I + P + + TN A +V GG SL +
Sbjct: 467 DGTLWAWGDNSSGQLGIGSTVAASTPQQI---TVTNPASAGNDWTAVAGGGAHSLGLKAD 523
Query: 91 GALWMWGNCP---LPDSS-TEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
G LW WG+ L D + T + V T +P +F + V VA G +AL + G
Sbjct: 524 GTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNP-GNFDRNWVA-VAAGGVFSLALQADG 581
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
++WG +N L LG + L P N + AV +F+++ +
Sbjct: 582 --------TIWTWG--DNSLLQLGTDPAMLTPATQR--NVPAQLAVASPPSTAFNSSWVA 629
Query: 207 HRKRPNDML----ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+ L + W +G GQLG+G T + P QV Y VS+ G H
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPY-VSLAAGTSH 688
Query: 263 TSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
+ S G +W+WG + G G P + N + +++ N P D +
Sbjct: 689 SLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSN-PVSAA-DDWLV 746
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
G +H+ + +G LW+WG+ SG LG G T + P +L P ++
Sbjct: 747 ATAGGSHSAALKSNG-TLWTWGQNTSGQLGNGTTTEADIPTALLEPRIS 794
Score = 196 (74.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 84/293 (28%), Positives = 119/293 (40%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V+ GG SL + + G LW WG S G + S P PV G+ A G+
Sbjct: 403 VEPGGAFSLGLRSNGTLWAWGGNA---SGQLGDGTTTPSAIPVPVVGGAGNWRT-TATGT 458
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP---WAVY 193
H VA+ + G ++WG N++GQLG+G + P+ I N S W
Sbjct: 459 AHSVAVRADG--------TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTA- 509
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVPEQVKELPQYVY 252
V G H+ L K + TFG LG+ + TT +V +
Sbjct: 510 -VAGGGAHSLGL---KADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV 565
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V+ G+F ++ + G +W+WG LG P A LT A P ++ P
Sbjct: 566 AVAAG-GVFSLALQAD-GTIWTWGDNSLLQLGTDP-AMLT--PATQRNVPAQLAVASPPS 620
Query: 311 PKFQDP-VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
F V +A G H + + DG LW+WG G LG G T F P V+
Sbjct: 621 TAFNSSWVAIAAGQDHGLSLQADG-TLWAWGANSVGQLGNGVTTATFTPVQVI 672
Score = 155 (59.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 57/194 (29%), Positives = 79/194 (40%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLG G + P ++ S W E G+F L R N L
Sbjct: 369 FGWGGNGAGQLGNGTFGAVTAPTVLSA--GASAWLGVEPG-GAFSLGL-----RSNGTL- 419
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W +G +GQLG GTT + +P V + + G H+ V + G +W+WG
Sbjct: 420 ---WAWGGNASGQLGDGTTTPSAIPVPV--VGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ G + A I ++ G D VA G AH++ + DG L
Sbjct: 475 -DNSSG---QLGIGSTVAASTPQQITVTNPASAG---NDWTAVAGGGAHSLGLKADG-TL 526
Query: 337 WSWGRGRSGVLGTG 350
WSWG G LG G
Sbjct: 527 WSWGDNTFGQLGDG 540
Score = 134 (52.2 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 46/148 (31%), Positives = 63/148 (42%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W G + GQLG GT + P QV + +V G H+ + + G +W+WG
Sbjct: 54 WAAGSNQFGQLGDGTGINRTSPVQVPGTWK-----TVAAGTTHSLGIKADGSLWAWGSNL 108
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G + A + SPI I G G D V V+ G + + DG LWSW
Sbjct: 109 -FGQLGQPLVNGQLATNKFSPIRI-GTG------NDWVAVSAGELTSFGLKGDG-TLWSW 159
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
G G LG G T+ P V+ PL+
Sbjct: 160 GNNLFGELGDGTTVSRPQPVQVVADPLS 187
Score = 126 (49.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
W++G G+LG GTT S P QV P V+V G H + + G +W+WG
Sbjct: 157 WSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG-- 214
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
A+LT + G + IL + +D ++ G H+V + DG LWS
Sbjct: 215 --------ANLT-GQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADG-SLWS 264
Query: 339 WGRGRSGVLGTG 350
WG+ G LG G
Sbjct: 265 WGQNLFGELGNG 276
Score = 126 (49.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
W +G GQLG G T P +K + ++ G H+ + + G +WSWG
Sbjct: 211 WAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW-TAISAGEMHSVALKADGSLWSWGQNL 269
Query: 278 --EKGLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
E G G+ P A++T +P + G G D V +A GA HTV + +G
Sbjct: 270 FGELGNGVALPGANVT--------TPTRV-GTG------SDWVAIAAGALHTVALHRNG- 313
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+ +WG G +G G + P +++ P
Sbjct: 314 TVSAWGNNAQGAVGDGTVANRSTPTLIVAP 343
Score = 125 (49.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 52/179 (29%), Positives = 70/179 (39%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAID 88
LG SL F +G P + TN +PI+I +V AG + S +
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQP-LVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLK 151
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTP-SPVWD-FHGHTVVKVACGSEHVVALVSAG 146
G LW WGN + G + VS P V D V VA G EH +AL + G
Sbjct: 152 GDGTLWSWGNNLFGEL---GDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADG 208
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
++WGAN GQLG G P ++ D W ++ G H+ L
Sbjct: 209 --------TLWAWGANLTGQLGTGGTGILPNPTPLK-IGTDRDWTA--ISAGEMHSVAL 256
Score = 122 (48.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 52/227 (22%), Positives = 87/227 (38%)
Query: 140 VALVSAGETYKG--EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ + GE D ++WGAN GQLG G P ++ D W ++
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLK-IGTDRDWTA--ISA 248
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT---QSALVPEQVKELPQYVYLV 254
G H+ L + W++G G+LG+G + P +V +V
Sbjct: 249 GEMHSVALK--------ADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV--- 297
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
++ G HT + G V +WG + R+ ++P+ + N
Sbjct: 298 AIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNN-------- 349
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V +A G + V +G ++ WG +G LG G AP ++
Sbjct: 350 --VAIAAGTGVSFSVLANG-TVFGWGGNGAGQLGNGTFGAVTAPTVL 393
Score = 110 (43.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 39/133 (29%), Positives = 53/133 (39%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
+V AGG +LA+ G LW WG L GG ++ + TP + T + + G
Sbjct: 193 AVAAGGEHALALQADGTLWAWG-ANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI--SAG 249
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H VAL + G + SWG N G+LG G S W +
Sbjct: 250 EMHSVALKADGSLW--------SWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVA--I 299
Query: 196 TCGSFHTALLTHR 208
G+ HT L HR
Sbjct: 300 AAGALHTVAL-HR 311
Score = 94 (38.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 60 LEDDSKTNHKAPIKIC----SVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSL 112
L D + N +P+++ +V AG SL I G+LW WG+ L G +
Sbjct: 64 LGDGTGINRTSPVQVPGTWKTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLA- 122
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ F+P + G+ V V+ G L S G KG+ + +SWG N G+LG G
Sbjct: 123 TNKFSPIRIGT--GNDWVAVSAGE-----LTSFG--LKGDGTL-WSWGNNLFGELGDGTT 172
Query: 173 ESRLRP 178
SR +P
Sbjct: 173 VSRPQP 178
Score = 89 (36.4 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 37/141 (26%), Positives = 57/141 (40%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G G +G GT + P + V V++ G + V + G V+ WG G
Sbjct: 318 WGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWG-GNGA 376
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G N + G +P ++S G +P G A ++ + +G LW+WG
Sbjct: 377 GQLGNGTF-----GAVTAPTVLSA-GASAWLGVEP-----GGAFSLGLRSNG-TLWAWGG 424
Query: 342 GRSGVLGTGKTIDFFAPAIVL 362
SG LG G T P V+
Sbjct: 425 NASGQLGDGTTTPSAIPVPVV 445
Score = 60 (26.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 24/92 (26%), Positives = 35/92 (38%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V AGG L + + G LW G+ G + S W VA G+
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWK-------TVAAGT 89
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
H + + + G + +WG+N GQLG
Sbjct: 90 THSLGIKADGSLW--------AWGSNLFGQLG 113
>TIGR_CMR|GSU_1251 [details] [associations]
symbol:GSU_1251 "BNR repeat domain protein" species:243231
"Geobacter sulfurreducens PCA" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE017180
GenomeReviews:AE017180_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Gene3D:2.60.40.360 InterPro:IPR008962 InterPro:IPR011040
SUPFAM:SSF50939 RefSeq:NP_952304.1 ProteinModelPortal:Q74DR4
GeneID:2688149 KEGG:gsu:GSU1251 PATRIC:22025273
HOGENOM:HOG000144307 OMA:QADGTLW
BioCyc:GSUL243231:GH27-1279-MONOMER Uniprot:Q74DR4
Length = 2082
Score = 206 (77.6 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 92/349 (26%), Positives = 141/349 (40%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNH-KAPIKICSVKAGGMMSLAIDNA 90
DG L G NS I + P + + TN A +V GG SL +
Sbjct: 467 DGTLWAWGDNSSGQLGIGSTVAASTPQQI---TVTNPASAGNDWTAVAGGGAHSLGLKAD 523
Query: 91 GALWMWGNCP---LPDSS-TEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
G LW WG+ L D + T + V T +P +F + V VA G +AL + G
Sbjct: 524 GTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNP-GNFDRNWVA-VAAGGVFSLALQADG 581
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
++WG +N L LG + L P N + AV +F+++ +
Sbjct: 582 --------TIWTWG--DNSLLQLGTDPAMLTPATQR--NVPAQLAVASPPSTAFNSSWVA 629
Query: 207 HRKRPNDML----ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+ L + W +G GQLG+G T + P QV Y VS+ G H
Sbjct: 630 IAAGQDHGLSLQADGTLWAWGANSVGQLGNGVTTATFTPVQVINAEGVPY-VSLAAGTSH 688
Query: 263 TSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
+ S G +W+WG + G G P + N + +++ N P D +
Sbjct: 689 SLAGRSDGTLWAWGNNTSGQLGTGPHPGDADPLNPQPHTVPARILTSN-PVSAA-DDWLV 746
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
G +H+ + +G LW+WG+ SG LG G T + P +L P ++
Sbjct: 747 ATAGGSHSAALKSNG-TLWTWGQNTSGQLGNGTTTEADIPTALLEPRIS 794
Score = 196 (74.1 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 84/293 (28%), Positives = 119/293 (40%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V+ GG SL + + G LW WG S G + S P PV G+ A G+
Sbjct: 403 VEPGGAFSLGLRSNGTLWAWGGNA---SGQLGDGTTTPSAIPVPVVGGAGNWRT-TATGT 458
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP---WAVY 193
H VA+ + G ++WG N++GQLG+G + P+ I N S W
Sbjct: 459 AHSVAVRADG--------TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWTA- 509
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVPEQVKELPQYVY 252
V G H+ L K + TFG LG+ + TT +V +
Sbjct: 510 -VAGGGAHSLGL---KADGTLWSWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNFDRNWV 565
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V+ G+F ++ + G +W+WG LG P A LT A P ++ P
Sbjct: 566 AVAAG-GVFSLALQAD-GTIWTWGDNSLLQLGTDP-AMLT--PATQRNVPAQLAVASPPS 620
Query: 311 PKFQDP-VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
F V +A G H + + DG LW+WG G LG G T F P V+
Sbjct: 621 TAFNSSWVAIAAGQDHGLSLQADG-TLWAWGANSVGQLGNGVTTATFTPVQVI 672
Score = 155 (59.6 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 57/194 (29%), Positives = 79/194 (40%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N GQLG G + P ++ S W E G+F L R N L
Sbjct: 369 FGWGGNGAGQLGNGTFGAVTAPTVLSA--GASAWLGVEPG-GAFSLGL-----RSNGTL- 419
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W +G +GQLG GTT + +P V + + G H+ V + G +W+WG
Sbjct: 420 ---WAWGGNASGQLGDGTTTPSAIPVPV--VGGAGNWRTTATGTAHSVAVRADGTLWAWG 474
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ G + A I ++ G D VA G AH++ + DG L
Sbjct: 475 -DNSSG---QLGIGSTVAASTPQQITVTNPASAG---NDWTAVAGGGAHSLGLKADG-TL 526
Query: 337 WSWGRGRSGVLGTG 350
WSWG G LG G
Sbjct: 527 WSWGDNTFGQLGDG 540
Score = 134 (52.2 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 46/148 (31%), Positives = 63/148 (42%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W G + GQLG GT + P QV + +V G H+ + + G +W+WG
Sbjct: 54 WAAGSNQFGQLGDGTGINRTSPVQVPGTWK-----TVAAGTTHSLGIKADGSLWAWGSNL 108
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G + A + SPI I G G D V V+ G + + DG LWSW
Sbjct: 109 -FGQLGQPLVNGQLATNKFSPIRI-GTG------NDWVAVSAGELTSFGLKGDG-TLWSW 159
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
G G LG G T+ P V+ PL+
Sbjct: 160 GNNLFGELGDGTTVSRPQPVQVVADPLS 187
Score = 126 (49.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 42/132 (31%), Positives = 60/132 (45%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
W++G G+LG GTT S P QV P V+V G H + + G +W+WG
Sbjct: 157 WSWGNNLFGELGDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADGTLWAWG-- 214
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
A+LT + G + IL + +D ++ G H+V + DG LWS
Sbjct: 215 --------ANLT-GQLGTGGTGILPNPTPLKIGTDRDWTAISAGEMHSVALKADG-SLWS 264
Query: 339 WGRGRSGVLGTG 350
WG+ G LG G
Sbjct: 265 WGQNLFGELGNG 276
Score = 126 (49.4 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 42/150 (28%), Positives = 66/150 (44%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
W +G GQLG G T P +K + ++ G H+ + + G +WSWG
Sbjct: 211 WAWGANLTGQLGTGGTGILPNPTPLKIGTDRDW-TAISAGEMHSVALKADGSLWSWGQNL 269
Query: 278 --EKGLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
E G G+ P A++T +P + G G D V +A GA HTV + +G
Sbjct: 270 FGELGNGVALPGANVT--------TPTRV-GTG------SDWVAIAAGALHTVALHRNG- 313
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+ +WG G +G G + P +++ P
Sbjct: 314 TVSAWGNNAQGAVGDGTVANRSTPTLIVAP 343
Score = 125 (49.1 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 52/179 (29%), Positives = 70/179 (39%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAID 88
LG SL F +G P + TN +PI+I +V AG + S +
Sbjct: 93 LGIKADGSLWAWGSNLFGQLGQP-LVNGQLATNKFSPIRIGTGNDWVAVSAGELTSFGLK 151
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTP-SPVWD-FHGHTVVKVACGSEHVVALVSAG 146
G LW WGN + G + VS P V D V VA G EH +AL + G
Sbjct: 152 GDGTLWSWGNNLFGEL---GDGTTVSRPQPVQVVADPLSNGRYVAVAAGGEHALALQADG 208
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
++WGAN GQLG G P ++ D W ++ G H+ L
Sbjct: 209 --------TLWAWGANLTGQLGTGGTGILPNPTPLK-IGTDRDWTA--ISAGEMHSVAL 256
Score = 122 (48.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 52/227 (22%), Positives = 87/227 (38%)
Query: 140 VALVSAGETYKG--EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ + GE D ++WGAN GQLG G P ++ D W ++
Sbjct: 192 VAVAAGGEHALALQADGTLWAWGANLTGQLGTGGTGILPNPTPLK-IGTDRDWTA--ISA 248
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT---QSALVPEQVKELPQYVYLV 254
G H+ L + W++G G+LG+G + P +V +V
Sbjct: 249 GEMHSVALK--------ADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSDWV--- 297
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
++ G HT + G V +WG + R+ ++P+ + N
Sbjct: 298 AIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNN-------- 349
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V +A G + V +G ++ WG +G LG G AP ++
Sbjct: 350 --VAIAAGTGVSFSVLANG-TVFGWGGNGAGQLGNGTFGAVTAPTVL 393
Score = 110 (43.8 bits), Expect = 3.7e-06, Sum P(2) = 3.7e-06
Identities = 39/133 (29%), Positives = 53/133 (39%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
+V AGG +LA+ G LW WG L GG ++ + TP + T + + G
Sbjct: 193 AVAAGGEHALALQADGTLWAWG-ANLTGQLGTGGTGILPNPTPLKIGTDRDWTAI--SAG 249
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H VAL + G + SWG N G+LG G S W +
Sbjct: 250 EMHSVALKADGSLW--------SWGQNLFGELGNGVALPGANVTTPTRVGTGSDWVA--I 299
Query: 196 TCGSFHTALLTHR 208
G+ HT L HR
Sbjct: 300 AAGALHTVAL-HR 311
Score = 94 (38.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 39/126 (30%), Positives = 58/126 (46%)
Query: 60 LEDDSKTNHKAPIKIC----SVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSL 112
L D + N +P+++ +V AG SL I G+LW WG+ L G +
Sbjct: 64 LGDGTGINRTSPVQVPGTWKTVAAGTTHSLGIKADGSLWAWGSNLFGQLGQPLVNGQLA- 122
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ F+P + G+ V V+ G L S G KG+ + +SWG N G+LG G
Sbjct: 123 TNKFSPIRIGT--GNDWVAVSAGE-----LTSFG--LKGDGTL-WSWGNNLFGELGDGTT 172
Query: 173 ESRLRP 178
SR +P
Sbjct: 173 VSRPQP 178
Score = 89 (36.4 bits), Expect = 9.4e-08, Sum P(2) = 9.4e-08
Identities = 37/141 (26%), Positives = 57/141 (40%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G G +G GT + P + V V++ G + V + G V+ WG G
Sbjct: 318 WGNNAQGAVGDGTVANRSTPTLIVAPVTLVNNVAIAAGTGVSFSVLANGTVFGWG-GNGA 376
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G N + G +P ++S G +P G A ++ + +G LW+WG
Sbjct: 377 GQLGNGTF-----GAVTAPTVLSA-GASAWLGVEP-----GGAFSLGLRSNG-TLWAWGG 424
Query: 342 GRSGVLGTGKTIDFFAPAIVL 362
SG LG G T P V+
Sbjct: 425 NASGQLGDGTTTPSAIPVPVV 445
Score = 60 (26.2 bits), Expect = 5.5e-08, Sum P(2) = 5.5e-08
Identities = 24/92 (26%), Positives = 35/92 (38%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V AGG L + + G LW G+ G + S W VA G+
Sbjct: 37 VAAGGNHVLTLRSDGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWK-------TVAAGT 89
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
H + + + G + +WG+N GQLG
Sbjct: 90 THSLGIKADGSLW--------AWGSNLFGQLG 113
>UNIPROTKB|A7Z018 [details] [associations]
symbol:RCC1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0000794 "condensed nuclear chromosome" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0042393 "histone binding"
evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
[GO:0031492 "nucleosomal DNA binding" evidence=IEA] [GO:0007090
"regulation of S phase of mitotic cell cycle" evidence=IEA]
[GO:0007088 "regulation of mitosis" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0007052
GO:GO:0051225 GO:GO:0000082 GO:GO:0031965 GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0000794
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0007090 GO:GO:0031492
GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
EMBL:DAAA02006335 EMBL:BC153215 IPI:IPI00868581
RefSeq:NP_001098878.1 UniGene:Bt.54942 SMR:A7Z018 STRING:A7Z018
Ensembl:ENSBTAT00000032060 GeneID:534142 KEGG:bta:534142
InParanoid:A7Z018 OMA:GTESCFV NextBio:20876286 Uniprot:A7Z018
Length = 422
Score = 195 (73.7 bits), Expect = 1.8e-12, P = 1.8e-12
Identities = 98/352 (27%), Positives = 146/352 (41%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ G +++WG+ D++ G
Sbjct: 99 LGRDTSVEGSEMVPGKVDLQEKVIQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIG 154
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETY---KGEDLVCY---SWGANN 163
L+ S PV VVKVA G++H+V L G+ Y GE AN
Sbjct: 155 LLEPMKKSMVPVQVQLSVPVVKVASGNDHLVMLTVDGDLYTLGSGEQGQLGRVPELFANR 214
Query: 164 NGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWT 221
G+ GL E L PK + ++ S V + CG++ T ++ E +
Sbjct: 215 GGRQGL---ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISS--------EGHVYG 263
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EK 279
FGL QLG T+S VP+ + V G HT + S G +S G E
Sbjct: 264 FGLSNYHQLGTQGTESCFVPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEY 323
Query: 280 G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G LGL A + P LI P+ VACGA+ VT DG ++++
Sbjct: 324 GRLGLGEGAE-------EKSVPTLI-------PRLPTVSSVACGASVGYAVTKDG-RVFA 368
Query: 339 WGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
WG G + LGTG+ D ++P + L +++GG + KD E
Sbjct: 369 WGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLT-VSSGGQHTVLLVKDKE 419
>UNIPROTKB|E2RMB0 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:AAEX03016754 EMBL:AAEX03016753 RefSeq:XP_535653.3
Ensembl:ENSCAFT00000015540 GeneID:478475 KEGG:cfa:478475
Uniprot:E2RMB0
Length = 1050
Score = 163 (62.4 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 47/129 (36%), Positives = 65/129 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG NN GQLGL D E R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 276 GM-EKG-LG 282
G KG LG
Sbjct: 320 GCGAKGQLG 328
Score = 159 (61.0 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 69/236 (29%), Positives = 101/236 (42%)
Query: 134 CG--SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I
Sbjct: 28 CGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN-KPEQIGALADQH 85
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 247
+ V CG H+ L+ R +++G G +GQLG TT+ S VP +++L
Sbjct: 86 ---IVHVACGESHSLALSDR--------GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 305
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGL-------GKEYPSQASPQRV-- 184
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCHV 236
Score = 129 (50.5 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 280 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G G LGTG T + P+ V
Sbjct: 319 FGCGAKGQLGTGHTCNVKCPSPV 341
Score = 123 (48.4 bits), Expect = 2.4e-12, Sum P(2) = 2.4e-12
Identities = 38/138 (27%), Positives = 70/138 (50%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG + S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEYPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 87 (35.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY-----TC---GLNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 188 SPWAVYEVTCGSFHTALLTHR 208
+ V CG H+ L+ R
Sbjct: 85 H---IVHVACGESHSLALSDR 102
>TAIR|locus:2099986 [details] [associations]
symbol:AT3G55580 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] INTERPRO:IPR000408 Pfam:PF00415
EMBL:CP002686 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AL132975
HSSP:P18754 IPI:IPI00521720 PIR:T47697 RefSeq:NP_191117.1
UniGene:At.35013 ProteinModelPortal:Q9M2S1 SMR:Q9M2S1 PRIDE:Q9M2S1
EnsemblPlants:AT3G55580.1 GeneID:824723 KEGG:ath:AT3G55580
TAIR:At3g55580 InParanoid:Q9M2S1 OMA:HPIPCIE PhylomeDB:Q9M2S1
ProtClustDB:CLSN2685056 Genevestigator:Q9M2S1 Uniprot:Q9M2S1
Length = 488
Score = 194 (73.4 bits), Expect = 3.3e-12, P = 3.3e-12
Identities = 75/250 (30%), Positives = 114/250 (45%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE---SRLRP-KII 181
G +V VA G H +AL G+ + WG GQLGLG R S P I
Sbjct: 233 GVRIVSVAAGGRHTLALSDIGQVW--------GWGYGGEGQLGLGSRVRLVSSPHPIPCI 284
Query: 182 E--TFNQDSPWAVYE---VTCG----SFHTALLTHRKRPNDMLES-MCWTFGLGENGQLG 231
E ++ + + V V CG S+ + + + ++ TFG G GQ G
Sbjct: 285 EPSSYGKATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLYGQCG 344
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G+T L P V L + + V GL+HT+ SS GDV+++G + G T
Sbjct: 345 QGSTDDELSPTCVSSLLG-IRIEEVAAGLWHTTCASSDGDVYAFGGNQ-FGQLG----TG 398
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ + + +L + N + + ++CGA HT ++TD+G +++ WG + G LG G
Sbjct: 399 CDQAETLPKLLEAPNLEN----VNVKTISCGARHTAVITDEG-RVFCWGWNKYGQLGIGD 453
Query: 352 TIDFFAPAIV 361
ID APA V
Sbjct: 454 VIDRNAPAEV 463
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 81/283 (28%), Positives = 121/283 (42%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHG 126
AP ++I SV AGG +LA+ + G +W WG LVSS P P + +G
Sbjct: 231 APGVRIVSVAAGGRHTLALSDIGQVWGWGYGGEGQLGLGSRVRLVSSPHPIPCIEPSSYG 290
Query: 127 HTVVK-------VACGSE--HVVALVSAGETYKG--ED---LVCYSWGANNNGQLGLGDR 172
V CG V ++ G + D L+ + WG GQ G G
Sbjct: 291 KATSSGVNMSSVVQCGRVLGSYVKKIACGGRHSAVITDTGALLTFGWGLY--GQCGQGST 348
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ L P + + + EV G +HT T D+ + FG + GQLG
Sbjct: 349 DDELSPTCVSSL---LGIRIEEVAAGLWHT---TCASSDGDV-----YAFGGNQFGQLGT 397
Query: 233 GTTQSALVPEQVKELP--QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNAS 288
G Q+ +P+ + E P + V + ++ CG HT+V++ G V+ WG K G LG+
Sbjct: 398 GCDQAETLPKLL-EAPNLENVNVKTISCGARHTAVITDEGRVFCWGWNKYGQLGI----- 451
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLV 329
GD +I N P + +D P +ACG HT+L+
Sbjct: 452 ------GD-----VIDRNAPAEVRIKDCFPKNIACGWWHTLLL 483
>ZFIN|ZDB-GENE-090311-16 [details] [associations]
symbol:si:ch211-281g13.4 "si:ch211-281g13.4"
species:7955 "Danio rerio" [GO:0006464 "cellular protein
modification process" evidence=IEA] [GO:0004842 "ubiquitin-protein
ligase activity" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-090311-16 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
eggNOG:COG5021 HOGENOM:HOG000208452 HOVERGEN:HBG050878
GeneTree:ENSGT00700000104312 EMBL:BX321880 IPI:IPI00923765
RefSeq:NP_001139174.1 UniGene:Dr.150552 Ensembl:ENSDART00000138510
GeneID:794323 NextBio:20931808 Uniprot:B8A4S5
Length = 985
Score = 198 (74.8 bits), Expect = 3.9e-12, P = 3.9e-12
Identities = 65/214 (30%), Positives = 97/214 (45%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ + G S+A+ N G L++WG +L+ S P + G V ++
Sbjct: 119 KVIQIACGDQHSVALSNDGQLFVWGENAHGQLGLRKEQALIQS--PQHLQSLCGIPVAQI 176
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H L +G V + WG+N+ GQLGLGD R P I+++ +
Sbjct: 177 SAGGNHSFVLSLSG--------VVFGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK---T 225
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++CG HTA L+ +TFG G GQLGH + + P V EL +
Sbjct: 226 VSISCGGEHTATLSKG--------GTVFTFGSGGFGQLGHNSLKDEHHPRLVAEL--WGS 275
Query: 253 LVS-VDCGLFHTSV-VSSAGDVWSWG--MEKGLG 282
VS V CG HT V V+ ++S+G M+ LG
Sbjct: 276 KVSQVTCGRHHTLVLVALTNRIYSFGCGMQGQLG 309
Score = 158 (60.7 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 54/160 (33%), Positives = 74/160 (46%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG G T VP VK L VS+ CG HT+ +S G V+++G
Sbjct: 193 FGWGSNSAGQLGLGDTTDRFVPTIVKSLSGKK-TVSISCGGEHTATLSKGGTVFTFG-SG 250
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N D P L++ G K QV CG HT+++ +++S+
Sbjct: 251 GFG-----QLGHNSLKDEHHPRLVAELW--GSKVS---QVTCGRHHTLVLVALTNRIYSF 300
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTE-EFKQDELNTG 378
G G G LG G+ + P VL P EF +++ G
Sbjct: 301 GCGMQGQLGNGEQVKQSVPLPVLLPTDCNCEFTMEKIIAG 340
Score = 133 (51.9 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 58/216 (26%), Positives = 88/216 (40%)
Query: 32 DGQLGFSGSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
DGQL G N+ + EQ L I +P L+ I + + AGG S +
Sbjct: 136 DGQLFVWGENAHGQLGLRKEQAL-IQSPQHLQS------LCGIPVAQISAGGNHSFVLSL 188
Query: 90 AGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+G ++ WG+ +S+ + G F P+ V G V ++CG EH L S G T
Sbjct: 189 SGVVFGWGS----NSAGQLGLGDTTDRFVPTIVKSLSGKKTVSISCGGEHTATL-SKGGT 243
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA--VYEVTCGSFHTALLT 206
+++G+ GQLG + P+++ W V +VTCG HT +L
Sbjct: 244 V-------FTFGSGGFGQLGHNSLKDEHHPRLVAEL-----WGSKVSQVTCGRHHTLVLV 291
Query: 207 HRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVP 241
N + C G LG Q+ L+P
Sbjct: 292 --ALTNRIYSFGCGMQGQLGNGEQVKQSVPLPVLLP 325
Score = 40 (19.1 bits), Expect = 5.4e-07, Sum P(2) = 5.4e-07
Identities = 14/56 (25%), Positives = 22/56 (39%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDL-VCYSW-GANNNG--QLGLGDRES 174
D + + CG + V L G+ + VC G +N Q+ GD+ S
Sbjct: 75 DLKREKIRSIVCGEDGAVLLADGGKVLLMDKYTVCRPLKGLDNTKVIQIACGDQHS 130
>UNIPROTKB|F1RW66 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 CTD:8916 KO:K10614 OMA:SPAVDFR
EMBL:FP015981 EMBL:CU915521 RefSeq:XP_003129374.3 UniGene:Ssc.42366
Ensembl:ENSSSCT00000010082 GeneID:100517903 KEGG:ssc:100517903
Uniprot:F1RW66
Length = 1050
Score = 162 (62.1 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 43/121 (35%), Positives = 61/121 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG NN GQLGL D E R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLLRAQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 276 G 276
G
Sbjct: 320 G 320
Score = 161 (61.7 bits), Expect = 4.6e-08, P = 4.6e-08
Identities = 69/236 (29%), Positives = 102/236 (43%)
Query: 134 CG--SEHVVALVSAG---ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I +
Sbjct: 28 CGFISDRSVKEVACGGDHSVFLLEDGEVYTCGLNTKGQLG-HEREGN-KPEQIGALADEH 85
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 247
+ V CG H+ L+ R +++G G +GQLG TT+ S VP +++L
Sbjct: 86 ---IVHVACGESHSLALSDR--------GQLFSWGAGSDGQLGLMTTEESVAVPRLIQKL 134
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 305
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGL-------GKEFPSQASPQRV-- 184
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCHV 236
Score = 128 (50.1 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEEDRESPCHVKLL-RAQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 280 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G G LGTG T + P+ V
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 3.9e-12, Sum P(2) = 3.9e-12
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEESVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 91 (37.1 bits), Expect = 6.2e-09, Sum P(2) = 6.2e-09
Identities = 28/81 (34%), Positives = 39/81 (48%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG +H V L+ GE Y C G N GQLG +RE +P+ I +
Sbjct: 35 SVKEVACGGDHSVFLLEDGEVY-----TC---GLNTKGQLG-HEREGN-KPEQIGALADE 84
Query: 188 SPWAVYEVTCGSFHTALLTHR 208
+ V CG H+ L+ R
Sbjct: 85 H---IVHVACGESHSLALSDR 102
>TAIR|locus:2092190 [details] [associations]
symbol:AT3G26100 species:3702 "Arabidopsis thaliana"
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686
EMBL:AB023041 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 HSSP:P18754
EMBL:AK230272 IPI:IPI00540426 RefSeq:NP_974362.1 UniGene:At.25510
UniGene:At.69016 ProteinModelPortal:Q9LU80 SMR:Q9LU80 STRING:Q9LU80
PRIDE:Q9LU80 EnsemblPlants:AT3G26100.2 GeneID:822208
KEGG:ath:AT3G26100 TAIR:At3g26100 HOGENOM:HOG000070923
InParanoid:Q9LU80 OMA:LACQPNG PhylomeDB:Q9LU80
ProtClustDB:CLSN2688790 Genevestigator:Q9LU80 Uniprot:Q9LU80
Length = 532
Score = 194 (73.4 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 81/288 (28%), Positives = 126/288 (43%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWM--WGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHT 128
I + G + + G ++ WGN TE + P P+
Sbjct: 249 IFVVQAAIGNYFTAVLSREGKVYTFSWGNDGRLGHQTEA-----ADVEPRPLLGPLENVP 303
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV++A G +++AL + + YS G G+LG G R P++IE F Q
Sbjct: 304 VVQIAAGYCYLLALAC-----QPNGMSVYSVGCGLGGKLGHGSRTDEKYPRVIEQF-QIL 357
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V G++H A++ R +C T+G G G LGHG + VP+ V+ L
Sbjct: 358 NLQPRVVAAGAWHAAVVGQDGR-------VC-TWGWGRYGCLGHGNEECESVPKVVEGL- 408
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGN 306
+V V V G + T VVS GDV+S+G + LG P+ N + +SP +++
Sbjct: 409 SHVKAVHVATGDYTTFVVSDDGDVYSFGCGESASLGHHPSFDEQGNRHANVLSPTVVTSL 468
Query: 307 GPHGPKFQDPVQVACGA-----AHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ VQ++ AHT +T+ G KL+++G G G LGT
Sbjct: 469 KQVNERM---VQISLTNSIYWNAHTFALTESG-KLFAFGAGDQGQLGT 512
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 57/215 (26%), Positives = 93/215 (43%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++I AG ++ I + G ++ G ++ GG TP V VV+
Sbjct: 195 VRIIQAAAGAARTMLISDDGKVYACGKESFGEAEY-GGQGTKPVTTPQLVTSLKNIFVVQ 253
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
A G+ L G+ Y +SWG N+G+LG + + P+ + ++ P
Sbjct: 254 AAIGNYFTAVLSREGKVYT------FSWG--NDGRLGHQTEAADVEPRPLLGPLENVP-- 303
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ G + LL +PN M S+ ++ G G G+LGHG+ P +++ Q +
Sbjct: 304 VVQIAAG--YCYLLALACQPNGM--SV-YSVGCGLGGKLGHGSRTDEKYPRVIEQF-QIL 357
Query: 252 YLVS--VDCGLFHTSVVSSAGDV--WSWGMEKGLG 282
L V G +H +VV G V W WG LG
Sbjct: 358 NLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG 392
Score = 120 (47.3 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 56/187 (29%), Positives = 82/187 (43%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ G + LL +PN M ++ G G G+LGHG+ P +++ Q +
Sbjct: 304 VVQIAAG--YCYLLALACQPNGM---SVYSVGCGLGGKLGHGSRTDEKYPRVIEQF-QIL 357
Query: 252 YLVS--VDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
L V G +H +VV G V W WG LG NE +++ P ++ G
Sbjct: 358 NLQPRVVAAGAWHAAVVGQDGRVCTWGWGRYGCLG-------HGNEECESV-PKVVEGLS 409
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP--AIVLWPP 365
H V VA G T +V+DDG ++S+G G S LG + D A VL P
Sbjct: 410 -H----VKAVHVATGDYTTFVVSDDG-DVYSFGCGESASLGHHPSFDEQGNRHANVLSPT 463
Query: 366 LTEEFKQ 372
+ KQ
Sbjct: 464 VVTSLKQ 470
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 27/129 (20%), Positives = 54/129 (41%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
AG S+A+ + G ++ +G +S G PV G +++ A G+
Sbjct: 150 AGPGHSVAVTSKGEVYTFG---YNNSGQLGHGHTEDEARIQPVRSLQGVRIIQAAAGAAR 206
Query: 139 VVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
+ + G+ Y G++ S+G G G G + P+++ + V +
Sbjct: 207 TMLISDDGKVYACGKE----SFGEAEYG--GQGTKPVTT-PQLVTSLKNIF---VVQAAI 256
Query: 198 GSFHTALLT 206
G++ TA+L+
Sbjct: 257 GNYFTAVLS 265
>UNIPROTKB|Q15034 [details] [associations]
symbol:HERC3 "Probable E3 ubiquitin-protein ligase HERC3"
species:9606 "Homo sapiens" [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IEA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] [GO:0005634
"nucleus" evidence=IBA] [GO:0042787 "protein ubiquitination
involved in ubiquitin-dependent protein catabolic process"
evidence=IBA] [GO:0005737 "cytoplasm" evidence=IDA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016023 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:CH471057 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787
SUPFAM:SSF56204 eggNOG:COG5021 EMBL:D25215 EMBL:AK289990
IPI:IPI00014216 RefSeq:NP_001258531.1 RefSeq:NP_055421.1
UniGene:Hs.35804 ProteinModelPortal:Q15034 SMR:Q15034 IntAct:Q15034
MINT:MINT-158126 STRING:Q15034 PhosphoSite:Q15034 DMDM:2495699
PaxDb:Q15034 PRIDE:Q15034 DNASU:8916 Ensembl:ENST00000264345
Ensembl:ENST00000402738 GeneID:8916 KEGG:hsa:8916 UCSC:uc003hrw.1
CTD:8916 GeneCards:GC04P089444 HGNC:HGNC:4876 HPA:HPA039170
MIM:605200 neXtProt:NX_Q15034 PharmGKB:PA29251 HOGENOM:HOG000208452
HOVERGEN:HBG050878 InParanoid:Q15034 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS PhylomeDB:Q15034 ChiTaRS:HERC3 GenomeRNAi:8916
NextBio:33540 ArrayExpress:Q15034 Bgee:Q15034 CleanEx:HS_HERC3
Genevestigator:Q15034 Uniprot:Q15034
Length = 1050
Score = 159 (61.0 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 69/236 (29%), Positives = 101/236 (42%)
Query: 134 CG--SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I
Sbjct: 28 CGFISDRSVKEVACGGNHSVFLLEDGEVYTCGLNTKGQLG-HEREGN-KPEQIGALADQH 85
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 247
+ V CG H+ L+ R +++G G +GQLG TT+ S VP +++L
Sbjct: 86 ---IIHVACGESHSLALSDR--------GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKL 134
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 305
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGL-------GKEFPSQASPQRV-- 184
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 158 (60.7 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG NN GQLGL D + R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 276 G 276
G
Sbjct: 320 G 320
Score = 127 (49.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 280 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G G LGTG T + P+ V
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 38/138 (27%), Positives = 69/138 (50%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLT 206
P A +V G H+ L+
Sbjct: 191 PLA--QVAAGGAHSFALS 206
Score = 87 (35.7 bits), Expect = 2.0e-08, Sum P(2) = 2.0e-08
Identities = 28/81 (34%), Positives = 37/81 (45%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY-----TC---GLNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 188 SPWAVYEVTCGSFHTALLTHR 208
+ V CG H+ L+ R
Sbjct: 85 H---IIHVACGESHSLALSDR 102
>UNIPROTKB|A2VDP7 [details] [associations]
symbol:HERC3 "HERC3 protein" species:9913 "Bos taurus"
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] [GO:0004842
"ubiquitin-protein ligase activity" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 CTD:8916
HOGENOM:HOG000208452 HOVERGEN:HBG050878 KO:K10614 OMA:SPAVDFR
OrthoDB:EOG4RBQHS EMBL:DAAA02017014 EMBL:BC133341 IPI:IPI00710875
RefSeq:NP_001077132.1 UniGene:Bt.85959 Ensembl:ENSBTAT00000013357
GeneID:510924 KEGG:bta:510924 InParanoid:A2VDP7 NextBio:20869685
Uniprot:A2VDP7
Length = 1050
Score = 158 (60.7 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 42/121 (34%), Positives = 61/121 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG NN GQLGL D + R P ++ VY ++CG HTA+LT
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 261 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 319
Query: 276 G 276
G
Sbjct: 320 G 320
Score = 149 (57.5 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 68/236 (28%), Positives = 98/236 (41%)
Query: 134 CG--SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
CG S+ V V+ G + ED Y+ G N GQLG +RE +P+ I
Sbjct: 28 CGFISDRSVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLG-HEREGN-KPEQIGALADQH 85
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 247
+ V CG H+ L+ D + W G G +GQLG T + S VP +++L
Sbjct: 86 ---IVHVACGESHSLALS------DQGQLFSW--GAGSDGQLGLMTIEDSVAVPRLIQKL 134
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISG 305
Q L V CG +H +++ G ++WG G LGL E SP +
Sbjct: 135 NQQTIL-QVSCGNWHCLALAADGQFFTWGRNSHGQLGL-------GKEFPSQASPQRV-- 184
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G QV G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 185 RSLEGIPL---AQVVAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 127 (49.8 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 43/143 (30%), Positives = 68/143 (47%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG + P VK L + +V + CG HT+V++ +G V+++G
Sbjct: 212 FGWGMNNAGQLGLSDEKDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSGGVFTFGA-- 268
Query: 280 GLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C L + D ++P ++ G + Q+ACG HT+ +++
Sbjct: 269 --GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAFVPSSGLIYA 318
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G G LGTG T + P+ V
Sbjct: 319 FGCGARGQLGTGHTCNVKCPSPV 341
Score = 122 (48.0 bits), Expect = 5.0e-12, Sum P(2) = 5.0e-12
Identities = 39/136 (28%), Positives = 66/136 (48%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHTVVK 131
I V G SLA+ + G L+ WG S + G + S P + + T+++
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWG----AGSDGQLGLMTIEDSVAVPRLIQKLNQQTILQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 190
V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + + P
Sbjct: 142 VSCGNWHCLALAADGQFF--------TWGRNSHGQLGLGKEFPSQASPQRVRSL-EGIPL 192
Query: 191 AVYEVTCGSFHTALLT 206
A +V G H+ L+
Sbjct: 193 A--QVVAGGAHSFALS 206
Score = 84 (34.6 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 27/79 (34%), Positives = 36/79 (45%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y C G N GQLG +RE +P+ I
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY-----TC---GVNTKGQLG-HEREGN-KPEQIGALADQ 84
Query: 188 SPWAVYEVTCGSFHTALLT 206
+ V CG H+ L+
Sbjct: 85 H---IVHVACGESHSLALS 100
>ZFIN|ZDB-GENE-040426-2213 [details] [associations]
symbol:rcc2 "regulator of chromosome condensation
2" species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051301 "cell division" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-040426-2213 GO:GO:0005730 GO:GO:0051301 GO:GO:0007067
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC066628
IPI:IPI00486648 RefSeq:NP_998341.1 UniGene:Dr.828
ProteinModelPortal:Q6NYE2 STRING:Q6NYE2 PRIDE:Q6NYE2
Ensembl:ENSDART00000010647 GeneID:406455 KEGG:dre:406455 CTD:55920
HOGENOM:HOG000232061 HOVERGEN:HBG080538 InParanoid:Q6NYE2
OMA:FGENKLG OrthoDB:EOG4DNF4B NextBio:20818048 ArrayExpress:Q6NYE2
Bgee:Q6NYE2 Uniprot:Q6NYE2
Length = 495
Score = 191 (72.3 bits), Expect = 7.4e-12, P = 7.4e-12
Identities = 76/246 (30%), Positives = 111/246 (45%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V+V+C A S T +G+ +SWG N+ GQLG GD + PK+IE ++
Sbjct: 121 VQVSCVVSGPCAAHSLIITTEGK---LWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE-- 175
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELP 248
+ CG HT LT +TFG + GQLG G T + L P ++
Sbjct: 176 -VIVAAACGRNHTLALTEN--------GTVYTFGENKLGQLGQGNQTDAVLSPATIQYNG 226
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNAS-LTRNEAGDAISPILISG 305
Q + V V CG + +V G+++S+G E G LG + + R + + ++
Sbjct: 227 QPI--VKVACGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRR 284
Query: 306 NGPHGPKFQD----PV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
K +D PV VACGA HT LV D +++SWG G G LG + D
Sbjct: 285 VAIFIEKTKDGQVLPVPNVVARDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKDE 343
Query: 356 FAPAIV 361
P +V
Sbjct: 344 MVPRLV 349
Score = 129 (50.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 72/293 (24%), Positives = 119/293 (40%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G +LA+ G ++ +G L V S P+ + ++G +VKVA
Sbjct: 177 IVAAACGRNHTLALTENGTVYTFGENKLGQLGQGNQTDAVLS--PATI-QYNGQPIVKVA 233
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ-LGLGDR---ESRLRPKIIETF---NQ 186
CG+E + + G Y G N++G+ + R + L P+ + F +
Sbjct: 234 CGAEFSMIVDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTK 293
Query: 187 DS-----PWAVY-EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
D P V +V CG+ HT +L +KR +++G G G+LGH + +V
Sbjct: 294 DGQVLPVPNVVARDVACGANHTLVLDSQKR--------VFSWGFGGYGRLGHAEQKDEMV 345
Query: 241 PEQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
P VK + P + CG + +S G ++ WG+ N S A+
Sbjct: 346 PRLVKLFDFPGRG-ATQIYCGYQCSFALSEMGGLFFWGVT-------NTSRESTMYPKAV 397
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS-GVLGTG 350
+ G K + +ACG + ++ DD SWG + G LG G
Sbjct: 398 QDLC-------GWKIRS---LACGKSSIIVAADDS--TISWGPSPTFGELGYG 438
>UNIPROTKB|E1B827 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072372 "primary cilium" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 OMA:EREVFAW EMBL:DAAA02048605
EMBL:DAAA02048606 IPI:IPI00700790 Ensembl:ENSBTAT00000020643
Uniprot:E1B827
Length = 698
Score = 190 (71.9 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 80/285 (28%), Positives = 131/285 (45%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ GG + +S P+ V G+ +V+
Sbjct: 397 VTIKHVACGDLFTACLTDRGIIMTFGSGS-NGCLGHGGLNDISQ--PTIVEALLGYEMVQ 453
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF-NQDSPW 190
VACG+ HV+AL + E + +WG + G+LGLG RES P+ + Q++
Sbjct: 454 VACGASHVLALSTERELF--------AWGRGDGGRLGLGTRESHSCPQQVPMPPGQEAQR 505
Query: 191 AVYEVTCGSFHT----ALLTHRKRPNDM-LESMCWTFGLGENGQLGHGTTQSAL--VPEQ 243
+ + T AL R N + L+ + LGE L H + AL P
Sbjct: 506 VICGIDSSVILTVPGQALACGSNRFNKLGLDHL----SLGEEPAL-HQQVEEALNFTPLG 560
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
L Q L+SVD G H++ V+++GD +++G + + L N + +P +
Sbjct: 561 SAPLDQEP-LLSVDLGTAHSAAVTASGDCYTFGSNQ------HGQLGTNARRVSRAPCQV 613
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
G G K VACG A TV + +G +++SWG+G G LG
Sbjct: 614 QGL--QGIKI---AMVACGDAFTVAIGAEG-EVYSWGKGARGRLG 652
Score = 173 (66.0 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 81/289 (28%), Positives = 119/289 (41%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDF----H 125
++ V AG + +G L +W PL GG L V P V F
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGALLPGAVEQQQPQFVSRFLEGQS 395
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 396 GVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGGLNDISQPTIVEAL- 446
Query: 186 QDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +V CG+ H AL T R E W G G+ G+LG GT +S P+QV
Sbjct: 447 --LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDGGRLGLGTRESHSCPQQV 495
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEA-GDAISPI 301
+P V CG+ + +++ G + G + LGL + SL A +
Sbjct: 496 P-MPPGQEAQRVICGIDSSVILTVPGQALACGSNRFNKLGL-DHLSLGEEPALHQQVEEA 553
Query: 302 LISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
L P Q+P+ V G AH+ VT G +++G + G LGT
Sbjct: 554 LNFTPLGSAPLDQEPLLSVDLGTAHSAAVTASG-DCYTFGSNQHGQLGT 601
>UNIPROTKB|P23800 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:10036 "Mesocricetus auratus" [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0007059
"chromosome segregation" evidence=ISS] [GO:0031492 "nucleosomal DNA
binding" evidence=ISS] [GO:0051225 "spindle assembly" evidence=ISS]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0007059 GO:GO:0051301 GO:GO:0007067 GO:GO:0051225
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0031492 HOVERGEN:HBG017712 EMBL:M33579 PIR:A34726
ProteinModelPortal:P23800 SMR:P23800 Uniprot:P23800
Length = 421
Score = 186 (70.5 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 97/355 (27%), Positives = 147/355 (41%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ G +++WG+ D++ G
Sbjct: 99 LGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIG 154
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG--------- 160
L+ S PV VVKVA G++H+V L + G+ Y L C G
Sbjct: 155 LLEPMKKSMVPVQVQLDMPVVKVASGNDHLVMLTTDGDLYT---LGCGEQGQLGRVPELF 211
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESM 218
AN G+ GL E L PK + ++ S V + CG++ T ++ E
Sbjct: 212 ANRGGRQGL---ERLLVPKCVLLKSRGSRGRVRFQDAFCGAYLTFAISR--------EGH 260
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM 277
+ FGL QLG T S +P+ + V G HT + S G +S G
Sbjct: 261 VYGFGLSNYHQLGTPGTASCFIPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYSLGR 320
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E G LGL A + P LIS + VACGA+ V+ DG +
Sbjct: 321 AEYGRLGLGEGAE-------EKSIPTLIS-------RLPVVSSVACGASVGYAVSKDG-R 365
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
+++WG G + LGTG+ D ++P + L +++GG + KD E
Sbjct: 366 VFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLT-VSSGGQHTVLLVKDKE 419
Score = 118 (46.6 bits), Expect = 0.00062, P = 0.00062
Identities = 41/146 (28%), Positives = 71/146 (48%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 25 VSHRSHKTE--PGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
++ +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLNQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +T+DG +++ WG R +GV+G
Sbjct: 130 HTAALTEDG-RVFLWGSFRDNNGVIG 154
>TAIR|locus:2035423 [details] [associations]
symbol:AT1G19880 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 OMA:FGENKLG
IPI:IPI00543359 RefSeq:NP_173417.2 UniGene:At.16200
ProteinModelPortal:F4HQZ1 SMR:F4HQZ1 PRIDE:F4HQZ1
EnsemblPlants:AT1G19880.1 GeneID:838576 KEGG:ath:AT1G19880
Uniprot:F4HQZ1
Length = 538
Score = 188 (71.2 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 73/241 (30%), Positives = 110/241 (45%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V C S H VAL G CY+WG N GQLG GD R RP ++ ++
Sbjct: 61 VATGCASFHCVALDVEGR--------CYTWGRNEKGQLGHGDMIQRDRPTVVSGLSKHK- 111
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE--L 247
+ + G HT +++ D +S+ FG + GQLG G+ ++ V +V+ L
Sbjct: 112 --IVKAAAGRNHTVVVS------DDGQSL--GFGWNKYGQLGLGSAKNGFVSVEVESTPL 161
Query: 248 PQYVY--LVSVDCGLFHTSVVSSA--GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
P V + +V CG T +SS + + G+ + G + T NE S + +
Sbjct: 162 PCVVSDEVTNVACGADFTVWLSSTEGASILTAGLPQ-YGQLGHG--TDNEFNMKDSSVRL 218
Query: 304 SGNGPHGPKF------QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+ PK + V+VACG HTV V +GY +++WG G G LG + D +A
Sbjct: 219 AYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGY-VYTWGFGGYGRLGHREQKDEWA 277
Query: 358 P 358
P
Sbjct: 278 P 278
Score = 146 (56.5 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 73/287 (25%), Positives = 117/287 (40%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ + +A+D G + WG + G ++ P+ V H +VK
Sbjct: 58 IRFVATGCASFHCVALDVEGRCYTWGR---NEKGQLGHGDMIQRDRPTVVSGLSKHKIVK 114
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
A G H V + G++ G + W N GQLGLG ++ +E + P
Sbjct: 115 AAAGRNHTVVVSDDGQSL-G-----FGW--NKYGQLGLGSAKNGFVS--VEVESTPLPCV 164
Query: 192 VY-EVT---CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-------SALV 240
V EVT CG+ T L+ + + + T GL + GQLGHGT S +
Sbjct: 165 VSDEVTNVACGADFTVWLSSTEGASIL------TAGLPQYGQLGHGTDNEFNMKDSSVRL 218
Query: 241 PEQVKELPQYVY------LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ + P+ + +V V CG HT V G V++WG G G L E
Sbjct: 219 AYEAQPRPKAIASLAGETIVKVACGTNHTVAVDKNGYVYTWGFG-GYG-----RLGHREQ 272
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
D +P I + + + ++ G+A++ T G +L+ WG+
Sbjct: 273 KDEWAPRRIDVFQRNNVLPPNAI-LSAGSANSAC-TAGGGQLYMWGK 317
Score = 103 (41.3 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 44/178 (24%), Positives = 77/178 (43%)
Query: 33 GQLGF-SGSNSLVPCVIEQF-LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
GQLG S N V +E L D + + + + + S + +++ +
Sbjct: 140 GQLGLGSAKNGFVSVEVESTPLPCVVSDEVTNVA-CGADFTVWLSSTEGASILTAGLPQY 198
Query: 91 GALWMW--GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
G L + DSS + + P + G T+VKVACG+ H VA+ G
Sbjct: 199 GQLGHGTDNEFNMKDSSVRLAYE--AQPRPKAIASLAGETIVKVACGTNHTVAVDKNG-- 254
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS---PWAVYEVTCGSFHTA 203
Y Y+WG G+LG +++ P+ I+ F +++ P A+ ++ GS ++A
Sbjct: 255 Y------VYTWGFGGYGRLGHREQKDEWAPRRIDVFQRNNVLPPNAI--LSAGSANSA 304
Score = 78 (32.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 17/59 (28%), Positives = 35/59 (59%)
Query: 216 ESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+S C ++G + G+LG+G +S+ P++V L + ++++ V CG H+ V+ D+
Sbjct: 354 DSSCISWGHAQYGELGYGPNGQKSSAAPKKVDML-EGMHVMGVACGFCHSMVIVDRTDI 411
>SGD|S000003065 [details] [associations]
symbol:SRM1 "Nucleotide exchange factor for Gsp1p"
species:4932 "Saccharomyces cerevisiae" [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0007067 "mitosis" evidence=IEA] [GO:0019236
"response to pheromone" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0004871 "signal transducer activity" evidence=IMP] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=ISM] [GO:0000054
"ribosomal subunit export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=IMP] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
SGD:S000003065 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016021
GO:GO:0051301 GO:GO:0007067 EMBL:BK006941 GO:GO:0000790
GO:GO:0004871 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0019236 GO:GO:0000054
GeneTree:ENSGT00700000104160 GO:GO:0006407 OMA:PFEAIWA
HOGENOM:HOG000170207 OrthoDB:EOG466ZVF EMBL:M27013 EMBL:Z72619
PIR:A32320 RefSeq:NP_011418.1 PDB:3OF7 PDBsum:3OF7
ProteinModelPortal:P21827 SMR:P21827 DIP:DIP-2315N IntAct:P21827
MINT:MINT-561451 STRING:P21827 PaxDb:P21827 PeptideAtlas:P21827
EnsemblFungi:YGL097W GeneID:852782 KEGG:sce:YGL097W CYGD:YGL097w
EvolutionaryTrace:P21827 NextBio:972265 Genevestigator:P21827
GermOnline:YGL097W Uniprot:P21827
Length = 482
Score = 165 (63.1 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 84/340 (24%), Positives = 140/340 (41%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFTPSPVWDFHGHTV 129
K+ + A MS A+ + G ++ WG + GF + TP V F + +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTFRCNEGIL--GFYQDKIKIQKTPWKVPTFSKYNI 223
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V++A G +H++ L G + ++WG QLG E R R K ++
Sbjct: 224 VQLAPGKDHILFLDEEG--------MVFAWGNGQQNQLGRKVME-RFRLKTLDPRPFGLR 274
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVK-E 246
Y + G H LT + N ++ W GL + GQ G ALV + +
Sbjct: 275 HVKY-IASGENHCFALT---KDNKLVS---W--GLNQFGQCGVSEDVEDGALVTKPKRLA 325
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPIL 302
LP V + S+ G H+ ++S GD++S G E G+ T + +
Sbjct: 326 LPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVP 385
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ + PKF+ VA G+ H+V V +G +SWG G + +G G D +
Sbjct: 386 LPTKLNNVPKFKS---VAAGSHHSVAVAQNGIA-YSWGFGETYAVGLGPFEDDTEVPTRI 441
Query: 363 WPPLTEEFKQDELNTGG---LDDEIKTKDLEGAEERDEKL 399
T++ + GG + +K D E AE+R +++
Sbjct: 442 KNTATQDHNIILVGCGGQFSVSGGVKLSD-EDAEKRADEM 480
Score = 67 (28.6 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG 97
KI S GGM +LA+D +W WG
Sbjct: 85 KIISFAVGGMHTLALDEESNVWSWG 109
>TAIR|locus:2086253 [details] [associations]
symbol:AT3G23270 "AT3G23270" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISM] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] InterPro:IPR000306 InterPro:IPR001849
InterPro:IPR024774 Pfam:PF01363 Pfam:PF12814 PROSITE:PS50003
SMART:SM00064 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005938 EMBL:CP002686 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0032065 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
IPI:IPI00516271 RefSeq:NP_188968.1 UniGene:At.53452
ProteinModelPortal:F4J2Y2 SMR:F4J2Y2 PRIDE:F4J2Y2
EnsemblPlants:AT3G23270.1 GeneID:821906 KEGG:ath:AT3G23270
OMA:PKFRAFR ArrayExpress:F4J2Y2 Uniprot:F4J2Y2
Length = 1045
Score = 190 (71.9 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 60/207 (28%), Positives = 101/207 (48%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH--RKRPNDM 214
+++G G LG G+RES PK +++ N +V C +HTA + + M
Sbjct: 380 FTFGDGAFGVLGHGNRESVSYPKEVQSLNG---LKTVKVACSIWHTAAIVEVMGQTATSM 436
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+T+G G+ +LGHG ++ L+P V L Y + + CG T ++++G V++
Sbjct: 437 SSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH-KIACGHTFTVALTTSGHVFT 495
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
G G + L N D P L+ G +F + ++ACGA H ++T
Sbjct: 496 MG-----GTA-HGQLG-NSISDGKLPCLVQDRLV-G-EFVE--EIACGAHHVAVLTSRS- 543
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++++WG+G +G LG G T D P +V
Sbjct: 544 EVFTWGKGANGRLGHGDTEDKRTPTLV 570
Score = 165 (63.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 74/299 (24%), Positives = 129/299 (43%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS--LVSSFTPSPVWDFHGHTVVKV- 132
S +GG I++ G +++WG +G S V + +P + V+ V
Sbjct: 196 SCSSGGSGPDDIESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPR-PLESNVVLDVH 254
Query: 133 -ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VALV T +GE ++WG G+LG G + RPK++E +
Sbjct: 255 QIVCGVRHVALV----TRQGE---VFTWGEEVGGRLGHGIQVDISRPKLVEFLALTN--- 304
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ V CG +HT +++ D+ W G+ G LGHG+ S +P++V + +
Sbjct: 305 IDFVACGEYHTCVVS---TSGDLFS---WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGL 358
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++SV CG +H+++ ++ G ++++G + G+ + N + + S NG
Sbjct: 359 QVLSVACGTWHSALATANGKLFTFG-DGAFGVLGHG----NRESVSYPKEVQSLNG---- 409
Query: 312 KFQDPVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V+VAC HT + + KL++WG G LG G + P V
Sbjct: 410 --LKTVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCV 466
Score = 125 (49.1 bits), Expect = 0.00037, P = 0.00037
Identities = 42/147 (28%), Positives = 66/147 (44%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
WT G+ +G + T ++ ++ + E + + + CG+ H ++V+ G+V++WG E
Sbjct: 220 WTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCGVRHVALVTRQGEVFTWGEEV 279
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L D P L+ F VACG HT +V+ G L+SW
Sbjct: 280 G------GRLGHGIQVDISRPKLVEFLALTNIDF-----VACGEYHTCVVSTSG-DLFSW 327
Query: 340 GRG--RSGVLGTGKTIDFFAPAIVLWP 364
G G G+LG G I + P V P
Sbjct: 328 GDGIHNVGLLGHGSDISHWIPKRVSGP 354
Score = 121 (47.7 bits), Expect = 0.00099, P = 0.00099
Identities = 38/144 (26%), Positives = 64/144 (44%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
+ G ++A+ +G ++ G + + G S+ P V D G V ++ACG
Sbjct: 477 IACGHTFTVALTTSGHVFTMGGT----AHGQLGNSISDGKLPCLVQDRLVGEFVEEIACG 532
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ HV L S E + +WG NG+LG GD E + P ++E V +
Sbjct: 533 AHHVAVLTSRSEVF--------TWGKGANGRLGHGDTEDKRTPTLVEALRDRH---VKSL 581
Query: 196 TCGSFHTALLTHRKRPNDMLESMC 219
+CGS T+ + K + +S+C
Sbjct: 582 SCGSNFTSSICIHKWVSGADQSIC 605
>UNIPROTKB|F1NUG6 [details] [associations]
symbol:Gga.50841 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005929
"cilium" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
GO:GO:0005929 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104160 EMBL:AADN02011054 IPI:IPI00586770
Ensembl:ENSGALT00000026211 OMA:ENGLMFT Uniprot:F1NUG6
Length = 720
Score = 142 (55.0 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 57/215 (26%), Positives = 91/215 (42%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVA 133
+ G + + G L+M+G S+ G L S T P+ V
Sbjct: 42 ISCGDEHTAVVTGNGKLYMFG------SNDWGQLGLGSKNTVRKPTCVKALKPEKTKLAV 95
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF-NQDSPWAV 192
CG H + G Y G N+ GQLGLGD E R +I F NQ +
Sbjct: 96 CGRNHTLVYTEKGNVYAA--------GGNSEGQLGLGDTEERTTFHLISFFTNQHK---I 144
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ GS+ +A +T + + +G GQ+G VP QV ++ + V
Sbjct: 145 KQLAAGSYTSAAVTE--------DGQLFVWGDNSEGQIGLADKTCVSVPCQV-DVGKPVS 195
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP 285
S+ CG +H++ ++ G+++++G E G LGL P
Sbjct: 196 --SISCGYYHSAFITGDGELYTFGEPENGKLGLLP 228
Score = 141 (54.7 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 51/160 (31%), Positives = 79/160 (49%)
Query: 128 TVVKVACGSE--HVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRE---SRLRPK 179
T V V C + V+ +S G + D Y++G NG+LGL + SR+
Sbjct: 180 TCVSVPCQVDVGKPVSSISCGYYHSAFITGDGELYTFGEPENGKLGLLPEQLKNSRVPQP 239
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SA 238
++ + V +V CG HT +LT E+ +TFGLG+ GQLGHGT
Sbjct: 240 VLGIMEK-----VNKVACGGEHTVVLT---------ETGVYTFGLGQYGQLGHGTLLFKT 285
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSA--GDVWSWG 276
VP+ VK L + + +V CG HT+V++ G ++++G
Sbjct: 286 SVPKSVKHLRSHK-IHNVTCGESHTAVIADTENGLMFTFG 324
Score = 120 (47.3 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 39/137 (28%), Positives = 69/137 (50%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ + +G GQ+G VP QV ++ + V S+ CG +H++ ++ G+++++
Sbjct: 160 DGQLFVWGDNSEGQIGLADKTCVSVPCQV-DVGKPVS--SISCGYYHSAFITGDGELYTF 216
Query: 276 GM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G E G LGL P L + + I+ N +VACG HTV++T+ G
Sbjct: 217 GEPENGKLGLLPE-QLKNSRVPQPVLGIMEKVN-----------KVACGGEHTVVLTETG 264
Query: 334 YKLWSWGRGRSGVLGTG 350
++++G G+ G LG G
Sbjct: 265 --VYTFGLGQYGQLGHG 279
Score = 108 (43.1 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 32/112 (28%), Positives = 49/112 (43%)
Query: 100 PLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVC 156
P+P+S F S+F PS W F V ++CG EH + G+ Y
Sbjct: 9 PVPESGAVFTFGK-SNFAENIPSKFW-FKNDKPVHISCGDEHTAVVTGNGKLYM------ 60
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+G+N+ GQLGLG + + +P ++ P CG HT + T +
Sbjct: 61 --FGSNDWGQLGLGSKNTVRKPTCVKALK---PEKTKLAVCGRNHTLVYTEK 107
Score = 106 (42.4 bits), Expect = 1.0e-09, Sum P(3) = 1.0e-09
Identities = 45/151 (29%), Positives = 74/151 (49%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKE--LPQYVYLV-----SVDCGLFHTSVVSSAGDV 272
+TFG ENG+LG L+PEQ+K +PQ V + V CG HT V++ G V
Sbjct: 214 YTFGEPENGKLG-------LLPEQLKNSRVPQPVLGIMEKVNKVACGGEHTVVLTETG-V 265
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD- 331
+++G+ + L L + ++ + H K + V CG +HT ++ D
Sbjct: 266 YTFGLGQYGQLGHGTLLFKTSVPKSVKHLR-----SH--KIHN---VTCGESHTAVIADT 315
Query: 332 DGYKLWSWGRGRSGVLGTGKT--IDFFAPAI 360
+ ++++G GR G LG G+ + F PA+
Sbjct: 316 ENGLMFTFGDGRHGKLGLGEENFANQFDPAL 346
Score = 94 (38.1 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 33/115 (28%), Positives = 50/115 (43%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y++G GQLG G + PK ++ ++ VTCG HTA++ D
Sbjct: 266 YTFGLGQYGQLGHGTLLFKTSVPKSVKHLRSHK---IHNVTCGESHTAVIA------DTE 316
Query: 216 ESMCWTFGLGENGQLGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ +TFG G +G+LG G A P + L+ V CG H V ++
Sbjct: 317 NGLMFTFGDGRHGKLGLGEENFANQFDPALCSNFLSFTVLL-VACGGCHMLVFAT 370
Score = 86 (35.3 bits), Expect = 3.2e-06, Sum P(3) = 3.2e-06
Identities = 39/125 (31%), Positives = 49/125 (39%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
YTS DGQL G NS + + P + D K P+ S+ G
Sbjct: 152 YTSAAVTEDGQLFVWGDNSEGQIGLADKTCVSVPCQV-DVGK-----PVS--SISCGYYH 203
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
S I G L+ +G P++ G L +S P PV V KVACG EH V
Sbjct: 204 SAFITGDGELYTFGE---PENGKLGLLPEQLKNSRVPQPVLGIM-EKVNKVACGGEHTVV 259
Query: 142 LVSAG 146
L G
Sbjct: 260 LTETG 264
Score = 52 (23.4 bits), Expect = 3.2e-11, Sum P(3) = 3.2e-11
Identities = 15/52 (28%), Positives = 30/52 (57%)
Query: 368 EEFKQDELNTGGLDD------EIKTKDLEGAEERDEKLSSAMEEMKLLQSKL 413
EE + +E+ GG ++ E + +D EG EER+E+ ++ +++ +KL
Sbjct: 634 EEEEVEEVEEGGNEEDEDEGQEEEEEDREG-EEREEEEEKTKDKRRIVNNKL 684
Score = 51 (23.0 bits), Expect = 4.0e-11, Sum P(3) = 4.0e-11
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 365 PLTEEFKQDELNTGGL---DDEIKTKDLEGAEERDEKLSSAMEEMKL 408
P+ ++ K++E GG D+E + K+ E EE +E A EE +L
Sbjct: 525 PVQKQKKEEE--EGGNEEEDEEEEDKEEEEGEEMEEDEGKAEEEQEL 569
Score = 49 (22.3 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 405
E+ +Q+E GG ++E + EG E DE EE
Sbjct: 621 EKREQEEEEEGGEEEEEVEEVEEGGNEEDEDEGQEEEE 658
Score = 49 (22.3 bits), Expect = 6.3e-11, Sum P(3) = 6.3e-11
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 368 EEFKQDELNTGGLDDE---IKTKDLEGAEERDEKLSSAMEE 405
+E + +E N G+++E I+ +++EGA+E E+ A EE
Sbjct: 567 QELELEEENEEGVEEEEEEIEEEEVEGADE--EEGEGAEEE 605
Score = 42 (19.8 bits), Expect = 3.2e-10, Sum P(3) = 3.2e-10
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMK 407
EE ++DE G ++E ++LE EE +E + EE++
Sbjct: 554 EEMEEDE---GKAEEE---QELELEEENEEGVEEEEEEIE 587
Score = 41 (19.5 bits), Expect = 4.1e-10, Sum P(3) = 4.1e-10
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDE 397
EE +++E G + + ++ EG EE +E
Sbjct: 608 EESQKEEKEEGEEEKREQEEEEEGGEEEEE 637
>UNIPROTKB|Q92834 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9606 "Homo sapiens" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0050896 "response to stimulus" evidence=IEA] [GO:0035085
"cilium axoneme" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007601 "visual perception" evidence=IMP] [GO:0001750
"photoreceptor outer segment" evidence=IDA] [GO:0005813
"centrosome" evidence=IDA] [GO:0042384 "cilium assembly"
evidence=IMP] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0036064 "cilium basal body" evidence=ISS] [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0006886 "intracellular protein
transport" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0006886 GO:GO:0007601
Orphanet:1872 Orphanet:791 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 GO:GO:0042384
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:CH471141 GO:GO:0042073 GO:GO:0001750 eggNOG:COG5184
Orphanet:244 GO:GO:0036064 Orphanet:49382 GO:GO:0036126
EMBL:AL606748 CTD:6103 HOVERGEN:HBG026899 EMBL:U57629 EMBL:X97668
EMBL:AJ238395 EMBL:AJ318463 EMBL:BC031624 EMBL:AF286471
EMBL:BK005711 IPI:IPI00023757 IPI:IPI00215806 IPI:IPI00215807
IPI:IPI00215808 IPI:IPI00382445 IPI:IPI00397031 RefSeq:NP_000319.1
RefSeq:NP_001030025.1 UniGene:Hs.61438 ProteinModelPortal:Q92834
SMR:Q92834 STRING:Q92834 PhosphoSite:Q92834 DMDM:23503098
PaxDb:Q92834 PRIDE:Q92834 DNASU:6103 Ensembl:ENST00000309513
Ensembl:ENST00000318842 Ensembl:ENST00000338898
Ensembl:ENST00000339363 Ensembl:ENST00000342811
Ensembl:ENST00000378505 Ensembl:ENST00000474584
Ensembl:ENST00000482855 GeneID:6103 KEGG:hsa:6103 UCSC:uc004deb.3
GeneCards:GC0XM038128 HGNC:HGNC:10295 HPA:HPA001593 MIM:300029
MIM:300455 MIM:300834 MIM:304020 MIM:312610 neXtProt:NX_Q92834
Orphanet:247522 PharmGKB:PA34656 OMA:NNVLPHY PhylomeDB:Q92834
ChiTaRS:RPGR GenomeRNAi:6103 NextBio:23741 ArrayExpress:Q92834
Bgee:Q92834 CleanEx:HS_RPGR Genevestigator:Q92834
GermOnline:ENSG00000156313 Uniprot:Q92834
Length = 1020
Score = 159 (61.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 64/227 (28%), Positives = 97/227 (42%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ G S + L+M+G+ G S +S P+ V V ACG
Sbjct: 40 LSCGDEHSAVVTGNNKLYMFGSNNWGQLGL-GSKSAISK--PTCVKALKPEKVKLAACGR 96
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H + G Y + G NN GQLGLGD E R +I F + + +++
Sbjct: 97 NHTLVSTEGGNVY--------ATGGNNEGQLGLGDTEERNTFHVISFFTSEHK--IKQLS 146
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
GS +A LT R W G GQ+G + VP+QV + + V +S
Sbjct: 147 AGSNTSAALTEDGR------LFMW--GDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWIS- 196
Query: 257 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPI 301
CG +H++ V++ G+++ +G E G LGL PN L + +S I
Sbjct: 197 -CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLLGNHRTPQLVSEI 241
Score = 136 (52.9 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 46/133 (34%), Positives = 76/133 (57%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
F G+N GQ+G + VP+QV + + V +S CG +H++ V++ G+++ +G E
Sbjct: 162 FMWGDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPE 218
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL PN L G+ +P L+S P + +QVACG HTV++T++ ++
Sbjct: 219 NGKLGL-PNQLL-----GNHRTPQLVS----EIP--EKVIQVACGGEHTVVLTENA--VY 264
Query: 338 SWGRGRSGVLGTG 350
++G G+ G LG G
Sbjct: 265 TFGLGQFGQLGLG 277
Score = 134 (52.2 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 49/150 (32%), Positives = 77/150 (51%)
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
SA T GE Y +G NG+LGL ++ + P+++ + P V +V CG H
Sbjct: 202 SAFVTTDGE---LYVFGEPENGKLGLPNQLLGNHRTPQLVS----EIPEKVIQVACGGEH 254
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVKELPQYVYLVSVD 257
T +LT E+ +TFGLG+ GQLG GT T V E +++ Q + +S
Sbjct: 255 TVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD--QTISYIS-- 301
Query: 258 CGLFHTSVVSSAGDVWSWGMEK----GLGL 283
CG HT++++ G ++++G + GLGL
Sbjct: 302 CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
Score = 114 (45.2 bits), Expect = 9.7e-09, Sum P(3) = 9.7e-09
Identities = 44/135 (32%), Positives = 66/135 (48%)
Query: 220 WTFGLGENGQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+ FG ENG+LG + + P+ V E+P+ V + V CG HT VV + V+++G+
Sbjct: 212 YVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV--IQVACGGEHT-VVLTENAVYTFGL 268
Query: 278 EK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
+ G LGL L I I + Q ++CG HT L+TD G
Sbjct: 269 GQFGQLGL--GTFLFETSEPKVIENI----------RDQTISYISCGENHTALITDIGL- 315
Query: 336 LWSWGRGRSGVLGTG 350
++++G GR G LG G
Sbjct: 316 MYTFGDGRHGKLGLG 330
Score = 112 (44.5 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 44/137 (32%), Positives = 64/137 (46%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVTI--GKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H SA T GE Y +G NG+LGL ++ + P+++ + P
Sbjct: 195 ISCGYYH-----SAFVTTDGE---LYVFGEPENGKLGLPNQLLGNHRTPQLVS----EIP 242
Query: 190 WAVYEVTCGSFHTALLT 206
V +V CG HT +LT
Sbjct: 243 EKVIQVACGGEHTVVLT 259
Score = 103 (41.3 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 34/108 (31%), Positives = 50/108 (46%)
Query: 101 LPDSSTEGGF--SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYS 158
+PDS F S + P W F V ++CG EH A+V+ G + + Y
Sbjct: 8 MPDSGAVFTFGKSKFAENNPGKFW-FKNDVPVHLSCGDEHS-AVVT------GNNKL-YM 58
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+G+NN GQLGLG + + +P ++ P V CG HT + T
Sbjct: 59 FGSNNWGQLGLGSKSAISKPTCVKALK---PEKVKLAACGRNHTLVST 103
Score = 87 (35.7 bits), Expect = 6.4e-07, Sum P(3) = 6.4e-07
Identities = 39/123 (31%), Positives = 61/123 (49%)
Query: 214 MLESMCWTFGLGENGQLGHGT----TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ E+ +TFGLG+ GQLG GT T V E +++ Q + +S CG HT++++
Sbjct: 258 LTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD--QTISYIS--CGENHTALITDI 313
Query: 270 GDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G ++++G + GLGL N I P L S + +F + VACG H
Sbjct: 314 GLMYTFGDGRHGKLGLGL-------ENFTNHFI-PTLCS----NFLRFIVKL-VACGGCH 360
Query: 326 TVL 328
V+
Sbjct: 361 MVV 363
Score = 44 (20.5 bits), Expect = 4.1e-11, Sum P(3) = 4.1e-11
Identities = 28/110 (25%), Positives = 49/110 (44%)
Query: 369 EFKQDELNTGGLDDEI-KTKDLEGAEERDEKLSSAMEEMK--LLQSKLSVMERYASILHG 425
E D+L D E KT++L+ E+ DE++++ E K + SV Y S G
Sbjct: 829 EILSDDLTDKAEDHEFSKTEELK-LEDVDEEINAENVESKKKTVGDDESVPTGYHSKTEG 887
Query: 426 SIFGKPFAAEQDIP----ISLKDMGFFDITKEWEN-MLESADRSKLVRLE 470
+ ++ + I +L++ + + + ML+ AD S L LE
Sbjct: 888 AERTNDDSSAETIEKKEKANLEERAICEYNENPKGYMLDDADSSSLEILE 937
>ZFIN|ZDB-GENE-090311-56 [details] [associations]
symbol:si:ch73-190m4.1 "si:ch73-190m4.1"
species:7955 "Danio rerio" [GO:0004842 "ubiquitin-protein ligase
activity" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090311-56
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:CR788312 EMBL:CU467858 IPI:IPI00933554 RefSeq:XP_688463.5
UniGene:Dr.113692 UniGene:Dr.113776 Ensembl:ENSDART00000111114
GeneID:559981 KEGG:dre:559981 NextBio:20883233 Uniprot:F1RDE7
Length = 992
Score = 188 (71.2 bits), Expect = 4.9e-11, P = 4.9e-11
Identities = 66/217 (30%), Positives = 98/217 (45%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVV 130
++ + G S+A+ N G L++WG L G + T SP + G V
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENALGQL----GLRKEQAGTQSPRHLQSLCGIPVA 174
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++ G H L +G V + WG N+ GQLGLGD R P ++ + +
Sbjct: 175 QISAGGNHSFVLSLSG--------VVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKK-- 224
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++CG HTA L +TFG G GQLGH + + P V EL +
Sbjct: 225 -IVSISCGGEHTAALAKG--------GTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL--W 273
Query: 251 VYLVS-VDCGLFHTSVVSSAGD--VWSWG--MEKGLG 282
VS V CG HT +VS+A ++S+G M+ LG
Sbjct: 274 GSKVSQVTCGRNHT-LVSTASPKLIYSFGCGMQGQLG 309
Score = 148 (57.2 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 52/160 (32%), Positives = 73/160 (45%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G N GQLG G T VP V L + +VS+ CG HT+ ++ G V+++G
Sbjct: 193 FGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKK-IVSISCGGEHTAALAKGGTVFTFG-SG 250
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G G L N D P L++ G K QV CG HT++ T ++S+
Sbjct: 251 GFG-----QLGHNSFKDEHHPRLVAELW--GSKVS---QVTCGRNHTLVSTASPKLIYSF 300
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPP-LTEEFKQDELNTG 378
G G G LG G+ + P V P +E+ +L G
Sbjct: 301 GCGMQGQLGNGEQVKQSVPLPVDQPTEYNDEYTIQKLVAG 340
Score = 122 (48.0 bits), Expect = 0.00073, P = 0.00073
Identities = 36/138 (26%), Positives = 59/138 (42%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + + AGG S + +G ++ WG +S+ + G F P+ V +V
Sbjct: 171 IPVAQISAGGNHSFVLSLSGVVFGWGG----NSAGQLGLGDTTDRFVPTVVNSLKRKKIV 226
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CG EH AL G + ++G+ GQLG + P+++ W
Sbjct: 227 SISCGGEHTAALAKGGTVF--------TFGSGGFGQLGHNSFKDEHHPRLVAEL-----W 273
Query: 191 A--VYEVTCGSFHTALLT 206
V +VTCG HT + T
Sbjct: 274 GSKVSQVTCGRNHTLVST 291
Score = 88 (36.0 bits), Expect = 7.6e-11, Sum P(2) = 7.6e-11
Identities = 28/103 (27%), Positives = 52/103 (50%)
Query: 107 EGGFSLV--SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNN 164
+GG L+ S SP+ V+++ACG +H +AL + G+ + WG N
Sbjct: 96 DGGKVLIMDKSTECSPLKGLENRQVIQIACGDQHSMALTNDGQLFV--------WGENAL 147
Query: 165 GQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLT 206
GQLGL ++ + P+ +++ P V +++ G H+ +L+
Sbjct: 148 GQLGLRKEQAGTQSPRHLQSLC-GIP--VAQISAGGNHSFVLS 187
>ZFIN|ZDB-GENE-081015-2 [details] [associations]
symbol:rpgrb "retinitis pigmentosa GTPase regulator
b" species:7955 "Danio rerio" [GO:0060287 "epithelial cilium
movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0060271 "cilium morphogenesis" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0007018
"microtubule-based movement" evidence=IMP] INTERPRO:IPR000408
Pfam:PF00415 ZFIN:ZDB-GENE-081015-2 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0010842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0060271 GO:GO:0060287
GeneTree:ENSGT00700000104160 EMBL:CR450831 IPI:IPI00798788
RefSeq:XP_685964.5 UniGene:Dr.100975 Ensembl:ENSDART00000088624
GeneID:557752 KEGG:dre:557752 CTD:557752 NextBio:20882140
Bgee:F1QM29 Uniprot:F1QM29
Length = 1413
Score = 173 (66.0 bits), Expect = 9.4e-09, Sum P(2) = 9.4e-09
Identities = 63/202 (31%), Positives = 94/202 (46%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVV 140
+L +N G L+M+G S+ G L + T P+ V V ACG H +
Sbjct: 49 ALVTEN-GKLFMFG------SNNWGQLGLGTKTTVNKPTCVKALKSERVKLTACGRTHTL 101
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
S G Y C G NN GQLGLGD R ++E FN+ P + + GS
Sbjct: 102 VFTSRGNLY-----AC---GGNNEGQLGLGDCNDRTSFHLVEFFNKQGP--IKMLAAGSN 151
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
+A LT R + +G GQ+G G +AL P++V + + V+ VS CG
Sbjct: 152 TSAALTQDGR--------LYMWGDNSEGQIGLGKESNALTPQEVS-VGKRVFWVS--CGY 200
Query: 261 FHTSVVSSAGDVWSWGMEKGLG 282
+H++ V+ G ++++G EK G
Sbjct: 201 YHSAFVTVDGALYTFG-EKDSG 221
Score = 137 (53.3 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 44/139 (31%), Positives = 69/139 (49%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
++ +TFG ++G+LG T + A VP+QV ++P V V V CG HT V + +V
Sbjct: 208 VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPDRV--VQVACGGGHT-VALTENEV 264
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
+S+G+ + G + + + G H ACG HT L+TD+
Sbjct: 265 YSFGLGQ-FGQLGHGTFIFESRLPRVVEHFRKGRVKHA---------ACGENHTALITDN 314
Query: 333 GYKLWSWGRGRSGVLGTGK 351
G L+++G GR G LG G+
Sbjct: 315 GL-LYTFGDGRHGKLGLGE 332
Score = 134 (52.2 bits), Expect = 1.3e-10, Sum P(3) = 1.3e-10
Identities = 47/155 (30%), Positives = 81/155 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-ME 278
+ +G GQ+G G +AL P++V + + V+ VS CG +H++ V+ G ++++G +
Sbjct: 163 YMWGDNSEGQIGLGKESNALTPQEVS-VGKRVFWVS--CGYYHSAFVTVDGALYTFGEKD 219
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL L ++ ++ I P VQVACG HTV +T++ +++
Sbjct: 220 SGKLGLSTE-KLANHKVPQQVTDI---------P--DRVVQVACGGGHTVALTEN--EVY 265
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 372
S+G G+ G LG G I F + P + E F++
Sbjct: 266 SFGLGQFGQLGHGTFI--FESRL---PRVVEHFRK 295
Score = 131 (51.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 41/126 (32%), Positives = 65/126 (51%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D Y++G ++G+LGL E K+ + D P V +V CG HT LT
Sbjct: 209 DGALYTFGEKDSGKLGLST-EKLANHKVPQQVT-DIPDRVVQVACGGGHTVALT------ 260
Query: 213 DMLESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
E+ ++FGLG+ GQLGHGT +S L P V+ + + CG HT++++ G
Sbjct: 261 ---ENEVYSFGLGQFGQLGHGTFIFESRL-PRVVEHFRKG-RVKHAACGENHTALITDNG 315
Query: 271 DVWSWG 276
++++G
Sbjct: 316 LLYTFG 321
Score = 104 (41.7 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 31/100 (31%), Positives = 47/100 (47%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G S + PS W ++++CG EH ALV T G+ + +G+NN GQLG
Sbjct: 19 GKSKFADNAPSKFW-LKNDVPLRISCGDEHT-ALV----TENGK---LFMFGSNNWGQLG 69
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
LG + + +P ++ + V CG HT + T R
Sbjct: 70 LGTKTTVNKPTCVKALKSER---VKLTACGRTHTLVFTSR 106
Score = 45 (20.9 bits), Expect = 6.1e-11, Sum P(3) = 6.1e-11
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 405
+E + DE T D+E + + E EE + K+ EE
Sbjct: 1258 QEDESDE-ETSDKDEEEEESENEEEEEEESKVEEEEEE 1294
Score = 44 (20.5 bits), Expect = 7.7e-11, Sum P(3) = 7.7e-11
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEGAEERDE 397
T E +E + D+E + EG EE E
Sbjct: 1225 TSEEDDEEQESSSEDEEKSESEAEGEEEESE 1255
Score = 42 (19.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 12/39 (30%), Positives = 19/39 (48%)
Query: 372 QDELNTGGLDDEI--KTKDLEGAEERDEKLSSAMEEMKL 408
++E + G +DE +T D + EE E EE K+
Sbjct: 1250 EEEESEGDQEDESDEETSDKDEEEEESENEEEEEEESKV 1288
Score = 42 (19.8 bits), Expect = 1.2e-10, Sum P(3) = 1.2e-10
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEE---RDEKLSSAMEE 405
EE Q+E G D+E + ++ E E+ + EK SS +++
Sbjct: 1325 EEDTQEEEQENGDDEEEEEEEEEEKEKTKTKREKASSRLQK 1365
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 371 KQDELNTGGLDDEIKTKDLEGAEERDEK 398
+ D+ + G DD+ KD EE +E+
Sbjct: 976 ENDDDSEGDEDDDTMIKDSSEEEESEEE 1003
Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(3) = 1.6e-10
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 369 EFKQDEL--NTGGLDDEIKTKDLEGAEERDEKLSSAMEE 405
E ++DE NT DDE + E EE+ E + EE
Sbjct: 1215 EAEEDETGENTSEEDDEEQESSSED-EEKSESEAEGEEE 1252
Score = 40 (19.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGA------EERDEKLSSAME 404
EE D N D+E + K+ + A EE +EK S+++
Sbjct: 1048 EEKSSDSSNASSEDEEEEEKNGDSAKASSEDEEEEEKSGSSVK 1090
Score = 40 (19.1 bits), Expect = 2.0e-10, Sum P(3) = 2.0e-10
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSK 412
EE +E + G +++ +T+D+E ++ + + EE++ SK
Sbjct: 926 EEESDEEESEGSVNERDETEDVEESDGLGNRRDKS-EEVEDSDSK 969
Score = 39 (18.8 bits), Expect = 2.5e-10, Sum P(3) = 2.5e-10
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 405
EE K T L+ E + + + EE+ E +S +E
Sbjct: 1128 EEQKSKSEATDDLESEEEEDNEDNEEEKSETSASTEDE 1165
>UNIPROTKB|F1PB99 [details] [associations]
symbol:HERC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:KDWITNT EMBL:AAEX03016753
EMBL:AAEX03016752 Ensembl:ENSCAFT00000015560 Uniprot:F1PB99
Length = 1025
Score = 187 (70.9 bits), Expect = 6.5e-11, P = 6.5e-11
Identities = 51/125 (40%), Positives = 66/125 (52%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YSWG N+ GQLGLG P +IE + V + CG HTALLT +
Sbjct: 212 YSWGRNDLGQLGLGHTNGEDFPSLIEALDNQK---VEFLACGGSHTALLTK--------D 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL-FHT-SVVSSAGDVWS 274
+ +TFG G+ GQLGH +TQ+ L P V EL + V CG +HT + VS G V+S
Sbjct: 261 GLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN-RVTQVACGSRWHTLAYVSDLGKVFS 319
Query: 275 WGMEK 279
+G K
Sbjct: 320 FGSGK 324
Score = 161 (61.7 bits), Expect = 4.4e-08, P = 4.4e-08
Identities = 50/171 (29%), Positives = 81/171 (47%)
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
++ ++TCG +H+ L+ + E W G +GQLG G +++ Q+ E
Sbjct: 136 SIIQITCGDYHSLALSKGQGG----ELFAW--GQNLHGQLGVGRLFTSIPTPQLVEHLSG 189
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V LV + G H+ +S +G+++SWG LG L D P LI
Sbjct: 190 VPLVQISAGKAHSMALSMSGNIYSWG-RNDLG---QLGLGHTNGEDF--PSLIEALDNQK 243
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+F +ACG +HT L+T DG ++++G G+ G LG T + P +V
Sbjct: 244 VEF-----LACGGSHTALLTKDGL-VFTFGAGKYGQLGHNSTQNELRPRLV 288
Score = 133 (51.9 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 47/168 (27%), Positives = 89/168 (52%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 186
+++++ CG H +AL S G+ G +L ++WG N +GQLG+G + + P+++E +
Sbjct: 136 SIIQITCGDYHSLAL-SKGQ---GGEL--FAWGQNLHGQLGVGRLFTSIPTPQLVEHLS- 188
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
P + +++ G H+ L+ + +++G + GQLG G T P ++
Sbjct: 189 GVP--LVQISAGKAHSMALS--------MSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA 238
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
L Q V ++ CG HT++++ G V+++G K L N+ T+NE
Sbjct: 239 LDNQKVEFLA--CGGSHTALLTKDGLVFTFGAGKYGQLGHNS--TQNE 282
Score = 130 (50.8 bits), Expect = 0.00010, P = 0.00010
Identities = 49/154 (31%), Positives = 79/154 (51%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++G + GQLG G T P ++ L Q V ++ CG HT++++ G V+++G
Sbjct: 212 YSWGRNDLGQLGLGHTNGEDFPSLIEALDNQKVEFLA--CGGSHTALLTKDGLVFTFGAG 269
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA-HTVLVTDDGYKLW 337
K L N+ T+NE + P L++ G + QVACG+ HT+ D K++
Sbjct: 270 KYGQLGHNS--TQNE----LRPRLVTELA--GNRV---TQVACGSRWHTLAYVSDLGKVF 318
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
S+G G+ G LG G T + P + + P EE K
Sbjct: 319 SFGSGKEGQLGNGGTHNQLIP-LPMKLPSNEELK 351
>RGD|1592835 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10116 "Rattus norvegicus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007052 "mitotic spindle
organization" evidence=ISO] [GO:0007059 "chromosome segregation"
evidence=ISO] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0031965 "nuclear membrane" evidence=ISO] [GO:0042393 "histone
binding" evidence=ISO] [GO:0050790 "regulation of catalytic
activity" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] RGD:1592835
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:CH473968 KO:K11493 CTD:1104
HOVERGEN:HBG017712 EMBL:BC160834 IPI:IPI00896784
RefSeq:NP_001121661.1 UniGene:Rn.217123 SMR:B1H227 GeneID:682908
KEGG:rno:682908 NextBio:724000 Genevestigator:B1H227 Uniprot:B1H227
Length = 421
Score = 181 (68.8 bits), Expect = 6.6e-11, P = 6.6e-11
Identities = 95/353 (26%), Positives = 148/353 (41%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ G +++WG+ D++ G
Sbjct: 99 LGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIG 154
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG--------- 160
L+ S PV VVKVA G++H+V L + G+ Y L C G
Sbjct: 155 LLEPMKKSMVPVQVQLDTQVVKVASGNDHLVMLTTDGDLYT---LGCGEQGQLGRVPELF 211
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESM 218
AN G+ GL E L P+ + ++ + V + CG++ T ++ E
Sbjct: 212 ANRGGRQGL---ERLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISR--------EGH 260
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM 277
+ FGL QLG T S +P+ + V G HT + S G +S G
Sbjct: 261 VYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E G LGL A + P LIS + VACGA+ V+ DG +
Sbjct: 321 AEYGRLGLGEGAE-------EKSIPTLIS-------RLPVVSSVACGASVGYAVSKDG-R 365
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKD 388
+++WG G + LGTG+ D ++P + L E + +++GG + KD
Sbjct: 366 VFAWGMGTNYQLGTGQEDDAWSPVEMTGKQL-ENREVLTVSSGGQHTVLLVKD 417
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 25 VSHRSHNTE--PGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +T+DG +++ WG R +GV+G
Sbjct: 130 HTAALTEDG-RVFLWGSFRDNNGVIG 154
>UNIPROTKB|E1BVG2 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 OMA:NCSNCLG EMBL:AADN02005390
IPI:IPI00590638 Ensembl:ENSGALT00000027473 Uniprot:E1BVG2
Length = 531
Score = 169 (64.5 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 43/143 (30%), Positives = 71/143 (49%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +G GQ+G G+T + P +V Q +V + CG + V + G+V+ WG
Sbjct: 150 YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYN- 208
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G N L G+ ++P ++ HG +Q+ACG AHT+ +TD+G L++W
Sbjct: 209 --G---NGQLGLGNNGNQLTPCRVAAL--HGVCI---LQIACGYAHTLALTDEGL-LYAW 257
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL 362
G G LGTG + +P ++
Sbjct: 258 GANTYGQLGTGNKSNQLSPLQIM 280
Score = 151 (58.2 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 39/125 (31%), Positives = 59/125 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++L P + + + ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPCRVAALHGV---CILQIACGYAHTLALTD--------E 251
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ + +G GQLG G + L P Q+ + V ++ C HTS + +G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKSNQLSPLQIMMEKERVVEIAA-CHSAHTSAAKTQSGQVYMW 310
Query: 276 GMEKG 280
G +G
Sbjct: 311 GQCRG 315
Score = 146 (56.5 bits), Expect = 7.6e-07, P = 7.6e-07
Identities = 63/224 (28%), Positives = 96/224 (42%)
Query: 144 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-H 201
SA E Y + + +G N + LG GD +S + PK +E + ++ GS H
Sbjct: 30 SANEAIYTTHNDEVFVFGLNCSNCLGTGDSQSTIVPKKLEALCGKK---ISSLSYGSGPH 86
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
L T E W G NG QLG+G T + P QV ++ V CG
Sbjct: 87 VLLCTEDG------EVYAW----GHNGYSQLGNGATNQGVTPVQVCTNLLLKKVIEVACG 136
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP--V 317
H+ +S GD+++WG G + S T N+ +P +S QD V
Sbjct: 137 SHHSMALSFDGDLYAWGYNN-CGQVGSGS-TANQP----TPRRVSNC------LQDKMVV 184
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ACG ++ V ++G +++ WG +G LG G + P V
Sbjct: 185 GIACGQTSSMAVVNNG-EVYGWGYNGNGQLGLGNNGNQLTPCRV 227
Score = 136 (52.9 bits), Expect = 9.5e-06, P = 9.5e-06
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S+A+ N G ++ WG + G + + TP V HG ++++A
Sbjct: 183 VVGIACGQTSSMAVVNNGEVYGWG---YNGNGQLGLGNNGNQLTPCRVAALHGVCILQIA 239
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H +AL G + Y+WGAN GQLG G++ ++L P I + V
Sbjct: 240 CGYAHTLALTDEG--------LLYAWGANTYGQLGTGNKSNQLSPLQIMMEKE----RVV 287
Query: 194 EVT-CGSFHTA 203
E+ C S HT+
Sbjct: 288 EIAACHSAHTS 298
Score = 116 (45.9 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 50/187 (26%), Positives = 82/187 (43%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G NGQLG G + L P +V L V ++ + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPCRVAAL-HGVCILQIACGYAHTLALTDEGLLYAWGANT-- 261
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 340
L + +SP+ I + + V++A C +AHT +++ WG
Sbjct: 262 ----YGQLGTGNKSNQLSPLQIM------MEKERVVEIAACHSAHTSAAKTQSGQVYMWG 311
Query: 341 --RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 391
RG+S VL T FA V+W L+ E Q++ T + + +K K+ +
Sbjct: 312 QCRGQSVVLPHLTHFACTDDVFACFATPAVMWRLLSVE--QEDFLT--VAESLK-KEFDS 366
Query: 392 AEERDEK 398
E D K
Sbjct: 367 PETADLK 373
Score = 115 (45.5 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 46/158 (29%), Positives = 68/158 (43%)
Query: 73 KICSVKAG-GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVV 130
KI S+ G G L G ++ WG+ S G + TP V + V+
Sbjct: 75 KISSLSYGSGPHVLLCTEDGEVYAWGH---NGYSQLGNGATNQGVTPVQVCTNLLLKKVI 131
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACGS H +AL ++ G DL Y+WG NN GQ+G G ++ P+ + QD
Sbjct: 132 EVACGSHHSMAL-----SFDG-DL--YAWGYNNCGQVGSGSTANQPTPRRVSNCLQDK-- 181
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
V + CG + + + + GLG NG
Sbjct: 182 MVVGIACGQTSSMAVVNNGEVYGWGYNGNGQLGLGNNG 219
>UNIPROTKB|E2QZC2 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
Ensembl:ENSCAFT00000029828 Uniprot:E2QZC2
Length = 701
Score = 184 (69.8 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 76/283 (26%), Positives = 124/283 (43%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ + G SL P+ V G+ +V+
Sbjct: 400 VTIKHVACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQ 456
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ HV+AL + E + +WG + G+LGLG RES P+ + +
Sbjct: 457 VACGASHVLALSTERELF--------AWGRGDGGRLGLGTRESHSCPQQV---SMPPGQE 505
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--- 248
V CG + +LT R + GL + LG + V E + P
Sbjct: 506 AQRVVCGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEPAPNQQVEEALSFTPLGS 564
Query: 249 ---QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L+SVD G H++ V+++GD +++G + + L N + +P + G
Sbjct: 565 APFDREPLLSVDLGTAHSAAVTASGDCYTFGSNQ------HGQLGTNARRVSRAPCQVQG 618
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
K VACG A TV V +G +++SWG+G G LG
Sbjct: 619 L--QNIKI---AMVACGDAFTVAVGAEG-EVYSWGKGARGRLG 655
Score = 172 (65.6 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 82/290 (28%), Positives = 121/290 (41%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDF----H 125
++ V AG + +G L +W PL GG L V P V F
Sbjct: 342 EVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGALLPGAVEQQQPQFVSRFLEGQS 398
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 399 GVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGSLNDISQPTIVEAL- 449
Query: 186 QDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +V CG+ H AL T R E W G G+ G+LG GT +S P+QV
Sbjct: 450 --LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDGGRLGLGTRESHSCPQQV 498
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPIL 302
+P V CG+ + +++ G + G + LGL SL A +
Sbjct: 499 S-MPPGQEAQRVVCGIDSSMILTVPGRALACGSNRFNKLGL-DRLSLGEEPAPNQQVEEA 556
Query: 303 ISGNGPHG--PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+S P G P ++P+ V G AH+ VT G +++G + G LGT
Sbjct: 557 LSFT-PLGSAPFDREPLLSVDLGTAHSAAVTASG-DCYTFGSNQHGQLGT 604
>UNIPROTKB|F1RNC5 [details] [associations]
symbol:NEK8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104137
EMBL:FP016171 Ensembl:ENSSSCT00000019338 OMA:EPASHQQ Uniprot:F1RNC5
Length = 700
Score = 183 (69.5 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 78/285 (27%), Positives = 125/285 (43%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ + G SL P+ V G+ +V+
Sbjct: 399 VTIKHVACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQ 455
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ HV+AL + E + +WG + G+LGLG RES P+++
Sbjct: 456 VACGASHVLALSTERELF--------AWGRGDGGRLGLGTRESHCCPQLVP---MPPGQE 504
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALVPEQVKELP- 248
V CG + +LT P L F LG + LG V E V P
Sbjct: 505 AQRVVCGIDSSMILTV---PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPL 561
Query: 249 -----QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
L+SVD G H+ +++++GD +++G + + L N + +P +
Sbjct: 562 GSAPLDQEPLLSVDLGPAHSLLLTASGDCYTFGSNQ------HGQLGTNARRVSRAPCRV 615
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
G G K VACG A TV + +G +++SWG+G G LG
Sbjct: 616 QGL--QGIKIST---VACGDAFTVAIGAEG-EVFSWGKGARGRLG 654
Score = 177 (67.4 bits), Expect = 4.7e-10, P = 4.7e-10
Identities = 82/290 (28%), Positives = 123/290 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSP--VWDF----H 125
++ V AG + +G L +W PL GG L + P P V F
Sbjct: 341 EVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGALLPGAIEQPQPQFVSRFLEGQS 397
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 398 GVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGSLNDISQPTIVEAL- 448
Query: 186 QDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +V CG+ H AL T R E W G G+ G+LG GT +S P+ V
Sbjct: 449 --LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDGGRLGLGTRESHCCPQLV 497
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPIL 302
+P V CG+ + +++ G + G + LGL P SL A
Sbjct: 498 P-MPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGLDP-LSLGEEPAPHQQVEEA 555
Query: 303 ISGNGPHG--PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
++ P G P Q+P+ V G AH++L+T G +++G + G LGT
Sbjct: 556 VTFT-PLGSAPLDQEPLLSVDLGPAHSLLLTASG-DCYTFGSNQHGQLGT 603
>MGI|MGI:1913989 [details] [associations]
symbol:Rcc1 "regulator of chromosome condensation 1"
species:10090 "Mus musculus" [GO:0000082 "G1/S transition of
mitotic cell cycle" evidence=ISO] [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0000794 "condensed nuclear chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=ISO;IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007052
"mitotic spindle organization" evidence=ISO] [GO:0007059
"chromosome segregation" evidence=ISO] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007088 "regulation of mitosis" evidence=ISO]
[GO:0007090 "regulation of S phase of mitotic cell cycle"
evidence=ISO] [GO:0031492 "nucleosomal DNA binding" evidence=ISO]
[GO:0042393 "histone binding" evidence=ISO] [GO:0050790 "regulation
of catalytic activity" evidence=IDA] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
MGI:MGI:1913989 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0007088 GO:GO:0007059 GO:GO:0051301
GO:GO:0007067 GO:GO:0007052 GO:GO:0051225 GO:GO:0000082
GO:GO:0031965 GO:GO:0000790 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0000794 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0007090 GO:GO:0031492 GeneTree:ENSGT00700000104160 KO:K11493
CTD:1104 HOGENOM:HOG000234341 HOVERGEN:HBG017712 EMBL:AK150153
EMBL:BC019807 IPI:IPI00626402 RefSeq:NP_598639.1 UniGene:Mm.255045
ProteinModelPortal:Q8VE37 SMR:Q8VE37 MINT:MINT-2568412
STRING:Q8VE37 PhosphoSite:Q8VE37 PaxDb:Q8VE37 PRIDE:Q8VE37
Ensembl:ENSMUST00000084250 Ensembl:ENSMUST00000105951 GeneID:100088
KEGG:mmu:100088 OrthoDB:EOG4320Z9 ChiTaRS:RCC1 NextBio:354253
Bgee:Q8VE37 CleanEx:MM_RCC1 Genevestigator:Q8VE37
GermOnline:ENSMUSG00000028896 Uniprot:Q8VE37
Length = 421
Score = 179 (68.1 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 94/353 (26%), Positives = 146/353 (41%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ G +++WG+ D++ G
Sbjct: 99 LGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTEDGRVFLWGS--FRDNN--GVIG 154
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG--------- 160
L+ S PV VVKVA G++H+V L + G+ Y L C G
Sbjct: 155 LLEPMKKSMVPVQVQLDAPVVKVASGNDHLVMLTNDGDLYT---LGCGEQGQLGRVPELF 211
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESM 218
AN G+ GLG L P+ + ++ + V + CG++ T ++ E
Sbjct: 212 ANRGGRQGLG---RLLVPRCVLLKSRGTRGRVRFQDAFCGAYFTFAISR--------EGH 260
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM 277
+ FGL QLG T S +P+ + V G HT + S G +S G
Sbjct: 261 VYGFGLSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 320
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E G LGL A + P LIS + VACGA+ V+ DG +
Sbjct: 321 AEYGRLGLGEGAE-------EKSIPTLIS-------RLPVVSSVACGASVGYAVSKDG-R 365
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKD 388
+++WG G + LGTG+ D ++P + L +++GG + KD
Sbjct: 366 VFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVLT-VSSGGQHTVLLVKD 417
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 77/292 (26%), Positives = 116/292 (39%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHTVVK 131
+ +AGGM ++ + +G ++ +G C D G + V S P V + VV+
Sbjct: 69 VVQAEAGGMHTVCLSQSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EKVVQ 123
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQDSP 189
V+ G H AL G + WG+ +NNG +GL E + + D+P
Sbjct: 124 VSAGDSHTAALTEDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQLDAP 173
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQL--GHGTTQSA---LVPEQ 243
V +V G+ H +LT+ D+ C G LG +L G Q LVP
Sbjct: 174 --VVKVASGNDHLVMLTN---DGDLYTLGCGEQGQLGRVPELFANRGGRQGLGRLLVPRC 228
Query: 244 V----KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
V + V CG + T +S G V+ G GL L G
Sbjct: 229 VLLKSRGTRGRVRFQDAFCGAYFTFAISREGHVY------GFGLSNYHQLGTPGTGSCFI 282
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P ++ + + K V + G HTV + +G K +S GR G LG G+
Sbjct: 283 PQNLT-SFKNSTKSW--VGFSGGQHHTVCMDSEG-KAYSLGRAEYGRLGLGE 330
Score = 120 (47.3 bits), Expect = 0.00037, P = 0.00037
Identities = 42/146 (28%), Positives = 71/146 (48%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 25 VSHRSHNTE--PGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +T+DG +++ WG R +GV+G
Sbjct: 130 HTAALTEDG-RVFLWGSFRDNNGVIG 154
>DICTYBASE|DDB_G0269934 [details] [associations]
symbol:DDB_G0269934 "Ras GTPase activation
domain-containing protein" species:44689 "Dictyostelium discoideum"
[GO:0051056 "regulation of small GTPase mediated signal
transduction" evidence=IEA] [GO:0043547 "positive regulation of
GTPase activity" evidence=IEA] [GO:0035023 "regulation of Rho
protein signal transduction" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005096 "GTPase activator activity" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001936
InterPro:IPR008936 Pfam:PF00616 Pfam:PF00621 PROSITE:PS50010
PROSITE:PS50018 SMART:SM00323 dictyBase:DDB_G0269934
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0007165 EMBL:AAFI02000005
GO:GO:0005096 GO:GO:0043547 SUPFAM:SSF48350 GO:GO:0005622
GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 Gene3D:1.10.506.10 eggNOG:COG5261
RefSeq:XP_646416.1 ProteinModelPortal:Q55CR5
EnsemblProtists:DDB0233497 GeneID:8617373 KEGG:ddi:DDB_G0269934
InParanoid:Q55CR5 OMA:SHTEYEN Uniprot:Q55CR5
Length = 2044
Score = 187 (70.9 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 60/192 (31%), Positives = 95/192 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YSWGA+ GQLGLGD P + + + V ++ GS H A+LT K ++L
Sbjct: 878 YSWGASEYGQLGLGDVTQHSSPMQVSALEK---YNVLQIASGSTHCAVLTTSK---EVL- 930
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
FG G +G + S +P V L +Y+++ + CG + T+ ++ GDV++WG
Sbjct: 931 ----VFGNG--AAMGAASVVS--LPTLVPSL-KYLHIDRLCCGHYSTAAITECGDVYTWG 981
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ LG N++ T SP LI + Q Q++CG HT +TD G ++
Sbjct: 982 TGQELGHGGNSTET--------SPKLIEAL-----RNQSIRQISCGGRHTAFLTDSG-RI 1027
Query: 337 WSWGRGRSGVLG 348
++ G+ G LG
Sbjct: 1028 FTCGKDSFGQLG 1039
Score = 171 (65.3 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 71/256 (27%), Positives = 120/256 (46%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLV----SSFTPSPVWDFHGHTVVKVACGSEHV 139
++ +D + L WG+ S+ + GF + S TP + +F+ + ++ GS +
Sbjct: 706 AIHLDTSRGLMTWGSA----SNCKLGFKVTAKDQSQPTPERLPNFNIPDICSISSGSYYS 761
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQ---LGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
L G+ Y + GA LG+ E +L P +E+ + V V+
Sbjct: 762 SVLTENGDVY------LWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD-----VVSVS 810
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G H A + R N E + W G+GENGQLGHG T + + P+ ++ L + ++ V
Sbjct: 811 IGFCHGAAV----RANG--ELLTW--GVGENGQLGHGDTNNQIEPKIIQSLTSF-WITQV 861
Query: 257 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
CG HT ++ G V+SWG E G LGL +T++ SP+ +S K+
Sbjct: 862 QCGEKHTICLTKNGKVYSWGASEYGQLGL---GDVTQHS-----SPMQVSAL----EKY- 908
Query: 315 DPVQVACGAAHTVLVT 330
+ +Q+A G+ H ++T
Sbjct: 909 NVLQIASGSTHCAVLT 924
Score = 144 (55.7 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 56/200 (28%), Positives = 81/200 (40%)
Query: 67 NHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPL--PDSSTEGGFSLVSSFTPSPVWDF 124
N P ICS+ +G S + G +++WG + P G + P +
Sbjct: 745 NFNIP-DICSISSGSYYSSVLTENGDVYLWGRGAVKTPAVPILGIPQIEDQLLPFKLESL 803
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
VV V+ G H A+ + GE +WG NGQLG GD +++ PKII++
Sbjct: 804 SD--VVSVSIGFCHGAAVRANGELL--------TWGVGENGQLGHGDTNNQIEPKIIQSL 853
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
S W + +V CG HT LT + S GLG+ Q SAL V
Sbjct: 854 T--SFW-ITQVQCGEKHTICLTKNGKVYSWGASEYGQLGLGDVTQHSSPMQVSALEKYNV 910
Query: 245 KELPQYVYLVSVDCGLFHTS 264
++ S C + TS
Sbjct: 911 LQIASG----STHCAVLTTS 926
>UNIPROTKB|Q86SG6 [details] [associations]
symbol:NEK8 "Serine/threonine-protein kinase Nek8"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0072372 "primary cilium" evidence=ISS]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0005856
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
EMBL:CH471159 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 KO:K08857 Orphanet:655 EMBL:AC010761 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 EMBL:AY242354 EMBL:AY267371
EMBL:BC112240 EMBL:BC113705 EMBL:AL833909 IPI:IPI00328397
RefSeq:NP_835464.1 UniGene:Hs.448468 ProteinModelPortal:Q86SG6
SMR:Q86SG6 IntAct:Q86SG6 STRING:Q86SG6 PhosphoSite:Q86SG6
DMDM:34098463 PaxDb:Q86SG6 PRIDE:Q86SG6 DNASU:284086
Ensembl:ENST00000268766 GeneID:284086 KEGG:hsa:284086
UCSC:uc002hcp.3 GeneCards:GC17P027055 HGNC:HGNC:13387 HPA:HPA040661
HPA:HPA040679 MIM:609799 MIM:613824 neXtProt:NX_Q86SG6
PharmGKB:PA38361 InParanoid:Q86SG6 OMA:EREVFAW OrthoDB:EOG4PZJ65
GenomeRNAi:284086 NextBio:94527 ArrayExpress:Q86SG6 Bgee:Q86SG6
CleanEx:HS_NEK8 Genevestigator:Q86SG6 GermOnline:ENSG00000160602
Uniprot:Q86SG6
Length = 692
Score = 181 (68.8 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 84/306 (27%), Positives = 129/306 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF-------- 124
++ V AG + +G L +W PL GG SL+ P F
Sbjct: 333 EVVQVAAGRTQKAGVTRSGRLILWEAPPLG----AGGGSLLPGAVEQPQPQFISRFLEGQ 388
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 389 SGVTIKHVACGDFFTACLTDRG--------IIMTFGSGSNGCLGHGSLTDISQPTIVEAL 440
Query: 185 NQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
+ + +V CG+ H AL T R E W G G++G+LG GT +S P+Q
Sbjct: 441 ---LGYEMVQVACGASHVLALSTER-------ELFAW--GRGDSGRLGLGTRESHSCPQQ 488
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASL-----TRNEAGD 296
V +P V CG+ + +++ G + G + LGL + SL + +
Sbjct: 489 VP-MPPGQEAQRVVCGIDSSMILTVPGQALACGSNRFNKLGL-DHLSLGEEPVPHQQVEE 546
Query: 297 AISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
A+S L+ G+ P Q+P+ + G AH+ VT G +++G + G LGT
Sbjct: 547 ALSFTLL-GSAPLD---QEPLLSIDLGTAHSAAVTASG-DCYTFGSNQHGQLGTNTRRGS 601
Query: 356 FAPAIV 361
AP V
Sbjct: 602 RAPCKV 607
Score = 149 (57.5 bits), Expect = 5.3e-07, P = 5.3e-07
Identities = 63/238 (26%), Positives = 102/238 (42%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
D T+V+ G E V A + ++WG ++G+LGLG RES P+ +
Sbjct: 430 DISQPTIVEALLGYEMVQVACGASHVLALSTERELFAWGRGDSGRLGLGTRESHSCPQQV 489
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
V CG + +LT P L C + + G L H + VP
Sbjct: 490 P---MPPGQEAQRVVCGIDSSMILTV---PGQALA--CGSNRFNKLG-LDHLSLGEEPVP 540
Query: 242 -EQVKELPQYVYL----------VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
+QV+E + L +S+D G H++ V+++GD +++G + + L
Sbjct: 541 HQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAVTASGDCYTFGSNQ------HGQLG 594
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
N + +P + G G K VACG A TV + + +++SWG+G G LG
Sbjct: 595 TNTRRGSRAPCKVQGL--EGIKM---AMVACGDAFTVAIGAES-EVYSWGKGARGRLG 646
Score = 146 (56.5 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 68/250 (27%), Positives = 109/250 (43%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALW 94
LG +G SL+P +EQ LE S + I V G + + + G +
Sbjct: 361 LG-AGGGSLLPGAVEQPQPQFISRFLEGQSG------VTIKHVACGDFFTACLTDRGIIM 413
Query: 95 MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDL 154
+G+ + G SL P+ V G+ +V+VACG+ HV+AL + E +
Sbjct: 414 TFGS---GSNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTERELF----- 465
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+WG ++G+LGLG RES P+ + V CG + +LT P
Sbjct: 466 ---AWGRGDSGRLGLGTRESHSCPQQVP---MPPGQEAQRVVCGIDSSMILTV---PGQA 516
Query: 215 LESMCWTFG-LG-ENGQLG-----HGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVV 266
L F LG ++ LG H + AL + P L+S+D G H++ V
Sbjct: 517 LACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAV 576
Query: 267 SSAGDVWSWG 276
+++GD +++G
Sbjct: 577 TASGDCYTFG 586
Score = 127 (49.8 bits), Expect = 0.00013, P = 0.00013
Identities = 55/212 (25%), Positives = 88/212 (41%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V G LA+ L+ WG DS G + S P V G +V
Sbjct: 444 EMVQVACGASHVLALSTERELFAWGR---GDSGRLGLGTRESHSCPQQVPMPPGQEAQRV 500
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNG--QLGLGDR---ESRLRPKIIETFNQD 187
CG + + L T G+ L C S N G L LG+ ++ + T
Sbjct: 501 VCGIDSSMIL-----TVPGQALACGSNRFNKLGLDHLSLGEEPVPHQQVEEALSFTLLGS 555
Query: 188 SPW---AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+P + + G+ H+A +T D C+TFG ++GQLG T + + P +V
Sbjct: 556 APLDQEPLLSIDLGTAHSAAVT---ASGD-----CYTFGSNQHGQLGTNTRRGSRAPCKV 607
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ L + + + V CG T + + +V+SWG
Sbjct: 608 QGL-EGIKMAMVACGDAFTVAIGAESEVYSWG 638
>UNIPROTKB|F1N7C1 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
OMA:HIFAGTY EMBL:DAAA02017014 IPI:IPI00825680 UniGene:Bt.42179
Ensembl:ENSBTAT00000027362 NextBio:20874614 Uniprot:F1N7C1
Length = 1016
Score = 180 (68.4 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 66/223 (29%), Positives = 95/223 (42%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A IKI V G S+A+ G ++ WG G S +P V G +
Sbjct: 126 AGIKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGL--GKEFPSQASPQRVRSLEGIPL 183
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES---RLRPKIIETFNQ 186
+VA G H AL +G ++ WG+N+ GQL L + R +P I
Sbjct: 184 AQVAAGGHHSFALSLSGTSF--------GWGSNSAGQLALSGNNAPVQRYKPVSIGALKT 235
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V ++CG HTA+LT + +TFG GQLGH T P+ V+
Sbjct: 236 ---LGVVSISCGYKHTAVLTQ--------DGKVFTFGDNSYGQLGHDPTAEKRGPQLVER 284
Query: 247 LPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNAS 288
+ V +DCG HT + + + G V S+G +G G C + S
Sbjct: 285 IEGLVS--QIDCGSDHTLAYIYTTGQVVSFG--RGPG-CASRS 322
Score = 164 (62.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 56/207 (27%), Positives = 94/207 (45%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + V G SLA+ + G ++ WG G F ++F P + G +++
Sbjct: 75 LNVALVSCGKEHSLAVCHKGRVFAWGAASEGQLGI-GEFK-ETTFIPKKIKTLAGIKIIQ 132
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 190
VACG H VAL G+ + SWG N++GQLGLG S+ P+ + + + P
Sbjct: 133 VACGHYHSVALSEDGQVF--------SWGTNSHGQLGLGKEFPSQASPQRVRSL-EGIPL 183
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCW-TFGLGENGQLGHGTTQSALVPEQVKELPQ 249
A +V G H+ L+ S W + G+ G+ P + L +
Sbjct: 184 A--QVAAGGHHSFALSLSGT------SFGWGSNSAGQLALSGNNAPVQRYKPVSIGAL-K 234
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ +VS+ CG HT+V++ G V+++G
Sbjct: 235 TLGVVSISCGYKHTAVLTQDGKVFTFG 261
Score = 135 (52.6 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 54/191 (28%), Positives = 86/191 (45%)
Query: 134 CGSEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGL-----GDRESRLRPKIIETFN 185
C + + ++GE + D S G N+ GQLG G++ R+ P + ET N
Sbjct: 19 CAGGNTLLQAASGEHHSLLLLSDGTVQSCGDNSRGQLGRKGTPRGEQPERI-PAL-ETLN 76
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQV 244
V V+CG H+ + H+ R W G GQLG G ++ +P+++
Sbjct: 77 ------VALVSCGKEHSLAVCHKGRV------FAW--GAASEGQLGIGEFKETTFIPKKI 122
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL-CPN-ASLTRNEAGDAI 298
K L + ++ V CG +H+ +S G V+SWG GLG P+ AS R + + I
Sbjct: 123 KTLAG-IKIIQVACGHYHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 299 SPILISGNGPH 309
++ G H
Sbjct: 182 PLAQVAAGGHH 192
Score = 134 (52.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 46/172 (26%), Positives = 78/172 (45%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 250
+ +V CG +H+ L+ + +++G +GQLG G S P++V+ L +
Sbjct: 130 IIQVACGHYHSVALSE--------DGQVFSWGTNSHGQLGLGKEFPSQASPQRVRSL-EG 180
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPH 309
+ L V G H+ +S +G + WG L +L+ N A P+ I
Sbjct: 181 IPLAQVAAGGHHSFALSLSGTSFGWGSNSAGQL----ALSGNNAPVQRYKPVSIGALKTL 236
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G V ++CG HT ++T DG K++++G G LG T + P +V
Sbjct: 237 GV-----VSISCGYKHTAVLTQDG-KVFTFGDNSYGQLGHDPTAEKRGPQLV 282
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 44/131 (33%), Positives = 62/131 (47%)
Query: 225 GEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKG 280
G+N GQLG T PE++ L + + + V CG H+ V G V++WG E
Sbjct: 48 GDNSRGQLGRKGTPRGEQPERIPAL-ETLNVALVSCGKEHSLAVCHKGRVFAWGAASEGQ 106
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
LG+ T P I G K +QVACG H+V +++DG +++SWG
Sbjct: 107 LGIGEFKETT-------FIPKKIKTLA--GIKI---IQVACGHYHSVALSEDG-QVFSWG 153
Query: 341 RGRSGVLGTGK 351
G LG GK
Sbjct: 154 TNSHGQLGLGK 164
Score = 122 (48.0 bits), Expect = 0.00075, P = 0.00075
Identities = 44/180 (24%), Positives = 76/180 (42%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVI-EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGM 82
Y S+ DGQ+ G+NS + ++F + +P + I + V AGG
Sbjct: 138 YHSVALSEDGQVFSWGTNSHGQLGLGKEFPSQASPQ------RVRSLEGIPLAQVAAGGH 191
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
S A+ +G + WG+ + G + V + P + VV ++CG +H L
Sbjct: 192 HSFALSLSGTSFGWGSNSAGQLALSGNNAPVQRYKPVSIGALKTLGVVSISCGYKHTAVL 251
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ + ++G N+ GQLG + P+++E V ++ CGS HT
Sbjct: 252 TQDGKVF--------TFGDNSYGQLGHDPTAEKRGPQLVERIEG----LVSQIDCGSDHT 299
Score = 71 (30.1 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 28/90 (31%), Positives = 43/90 (47%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-----GDRESRLRPKI 180
G+T+++ A G H + L+S G C G N+ GQLG G++ R+ P +
Sbjct: 22 GNTLLQAASGEHHSLLLLSDGTVQS-----C---GDNSRGQLGRKGTPRGEQPERI-PAL 72
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
ET N V V+CG H+ + H+ R
Sbjct: 73 -ETLN------VALVSCGKEHSLAVCHKGR 95
>DICTYBASE|DDB_G0282633 [details] [associations]
symbol:DDB_G0282633 "putative guanine nucleotide
exchange factor (GEF)" species:44689 "Dictyostelium discoideum"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 dictyBase:DDB_G0282633
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
RefSeq:XP_640165.2 ProteinModelPortal:Q54S74
EnsemblProtists:DDB0234270 GeneID:8623703 KEGG:ddi:DDB_G0282633
OMA:RLAYLCN ProtClustDB:CLSZ2501699 Uniprot:Q54S74
Length = 919
Score = 178 (67.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 73/297 (24%), Positives = 130/297 (43%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK- 131
+I S+ G SLA+D+ G ++ WGN FS+V + T V + G +
Sbjct: 247 RIKSIACGTHHSLAMDDLGQVYSWGNGASGRLGLGNDFSIVPTPTLISVINRFGSNEIAT 306
Query: 132 -VACGSEHVVALVSAGETYKGEDLVCYSWGANN-NGQLGLGDRESRLRPKIIETFNQDSP 189
+A G ++ + L S G+ Y + Y G +G LG ++ P I++
Sbjct: 307 AIAAGCDNSMILGSNGDVYSFGSNLHYKLGYKECDGALGFQSTPKKI-PSILQ------- 358
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVK--- 245
+ + C S+H+ L L+ +T G NG+LG ++ S+ PE+V
Sbjct: 359 --MKSIACASWHSVFLD--------LKGRVYTCGSSTNGRLGRAISSYSSFYPERVSITN 408
Query: 246 -----ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAI 298
LPQ + + CG T+V+S +G ++SWG+ + LGL ++ +
Sbjct: 409 SKTNGTLPQEEVIKQIACGTNFTTVLSESGSLYSWGVNTKSQLGLINLVGISEYYS---- 464
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
P L++ P+ A G H V ++D G +++ +G + G G+ ++F
Sbjct: 465 QPKLVTALNPYTIH-----SFAVGDQHVVALSDQG-EVFCYGDNSTLQCGFGEVLNF 515
Score = 158 (60.7 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 66/284 (23%), Positives = 126/284 (44%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
API+ + G +L + + GA++ G C + + ++ P+ + + +
Sbjct: 195 APIQ---TEFGQNYNLILTDTGAVYSSGLCSYGKTGHKKKRDVL---IPTQILELSNKRI 248
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ-D 187
+ACG+ H +A+ G+ Y SWG +G+LGLG+ S + P +I N+
Sbjct: 249 KSIACGTHHSLAMDDLGQVY--------SWGNGASGRLGLGNDFSIVPTPTLISVINRFG 300
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV-KE 246
S + G ++ +L D+ ++FG + +LG+ AL + K+
Sbjct: 301 SNEIATAIAAGCDNSMILGSN---GDV-----YSFGSNLHYKLGYKECDGALGFQSTPKK 352
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+P + + S+ C +H+ + G V++ G L S + + +S I+ +
Sbjct: 353 IPSILQMKSIACASWHSVFLDLKGRVYTCGSSTNGRLGRAISSYSSFYPERVS---ITNS 409
Query: 307 GPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+G Q+ V Q+ACG T ++++ G L+SWG LG
Sbjct: 410 KTNGTLPQEEVIKQIACGTNFTTVLSESG-SLYSWGVNTKSQLG 452
>DICTYBASE|DDB_G0278255 [details] [associations]
symbol:DDB_G0278255 "regulator of chromosome
condensation (RCC1) domain-containing protein" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] dictyBase:DDB_G0278255 INTERPRO:IPR000408
Pfam:PF00415 EMBL:AAFI02000023 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 RefSeq:XP_642243.1
ProteinModelPortal:Q54YF9 PRIDE:Q54YF9 EnsemblProtists:DDB0235387
GeneID:8621452 KEGG:ddi:DDB_G0278255 InParanoid:Q54YF9 OMA:DIACGGY
Uniprot:Q54YF9
Length = 514
Score = 174 (66.3 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 72/256 (28%), Positives = 112/256 (43%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWMWGNCPLPDS 104
L IG +DD+ N++ KI S+ +G SL + ++ WG
Sbjct: 149 LGIGRSIDDDDDNNNNNEKVYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWGR---NHK 205
Query: 105 STEGGFSLV---SSFTPSPVWDFHGHTVVKVACGSEHVVA---LVSAGETYK---GEDLV 155
+ GG V SS SP D + +KV ++ + + +G + G D
Sbjct: 206 NQLGGRERVKDKSSSPSSPSEDEYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLGNDGS 265
Query: 156 CYSWGANNNGQLGLG----DRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKR 210
YSWG G LG G D+E+ PK I TF ++ + ++ CG +H+ LT
Sbjct: 266 LYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLT---- 321
Query: 211 PNDMLESMCWTFGLGENGQLGHGT--TQSALVPEQVKELPQYVY---LVSVDCGLFHTSV 265
ND + +TFG GE GQLGHG T + +P+++K + S+ G S
Sbjct: 322 -ND---NEIYTFGYGEFGQLGHGENDTLNHYIPKRIKSTGDNAAGNKIKSIFAGDHANSF 377
Query: 266 -VSSAGDVWSWGMEKG 280
+++ G V+SWG G
Sbjct: 378 YITTDGSVYSWGWNDG 393
Score = 128 (50.1 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 51/212 (24%), Positives = 89/212 (41%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPD-SSTEGGFSLVSSFTPSPVWDF----HGH 127
KICS G +L + N G+L+ WGN G + +TP + F +
Sbjct: 249 KICS---GSDHNLLLGNDGSLYSWGNGYFGALGHGVGSNDKENIYTPKKITTFTLNNNES 305
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES--RLRPKIIETFN 185
+V +ACG H + L + E Y ++G GQLG G+ ++ PK I++
Sbjct: 306 RIVDIACGGYHSMFLTNDNEIY--------TFGYGEFGQLGHGENDTLNHYIPKRIKSTG 357
Query: 186 QDSPW-AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
++ + + G H + +++G + G LGHGT ++ P+++
Sbjct: 358 DNAAGNKIKSIFAGD-------HANSFYITTDGSVYSWGWNDGGSLGHGTNENHYSPKKI 410
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ L + S G HT S D++ +G
Sbjct: 411 QSLSNIKKITS---GFKHTLAQSINNDIYVFG 439
Score = 119 (46.9 bits), Expect = 0.00065, P = 0.00065
Identities = 62/255 (24%), Positives = 110/255 (43%)
Query: 129 VVKVACGSEHVVALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDR------------ES 174
V K+ +++++++VS E +D Y WG N+ QLG +R E
Sbjct: 168 VYKIEKFNDNIISIVSGYEHSLVVTKDDGIYGWGRNHKNQLGGRERVKDKSSSPSSPSED 227
Query: 175 RLRPKIIETFNQDSP-WAVYEVTC-GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
K I+ + P + ++ C GS H LL ND +++G G G LGH
Sbjct: 228 EYYSKPIKVLKETDPIFKDFKKICSGSDHNLLLG-----ND---GSLYSWGNGYFGALGH 279
Query: 233 GT----TQSALVPEQVKELP---QYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGL 283
G ++ P+++ +V + CG +H+ +++ +++++G E G LG
Sbjct: 280 GVGSNDKENIYTPKKITTFTLNNNESRIVDIACGGYHSMFLTNDNEIYTFGYGEFGQLGH 339
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
N +L I +G+ G K + A A++ +T DG ++SWG
Sbjct: 340 GENDTLNHYIP----KRIKSTGDNAAGNKIKSIF--AGDHANSFYITTDG-SVYSWGWND 392
Query: 344 SGVLGTGKTIDFFAP 358
G LG G + ++P
Sbjct: 393 GGSLGHGTNENHYSP 407
>RGD|1561739 [details] [associations]
symbol:Herc6 "HECT and RLD domain containing E3 ubiquitin
protein ligase family member 6" species:10116 "Rattus norvegicus"
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
HOGENOM:HOG000208452 HOVERGEN:HBG050878 OrthoDB:EOG4N30N6
IPI:IPI00553869 EMBL:BC085921 UniGene:Rn.107120
ProteinModelPortal:Q5U2P8 PhosphoSite:Q5U2P8 UCSC:RGD:1561739
InParanoid:Q5U2P8 ArrayExpress:Q5U2P8 Genevestigator:Q5U2P8
Uniprot:Q5U2P8
Length = 1034
Score = 178 (67.7 bits), Expect = 6.3e-10, P = 6.3e-10
Identities = 60/198 (30%), Positives = 94/198 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YS G N+ GQLG +S RP+ I+ S + V+CG H+ + H+ R
Sbjct: 50 YSCGDNSRGQLGQKSPQSTKRPEPIQAL---STVHIDLVSCGKEHSVAVCHQGR------ 100
Query: 217 SMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+T+G G GQLG G ++ + +P ++ L + ++ V CG +H+ +S G V+SW
Sbjct: 101 --VFTWGAGSEGQLGIGESKEISFMPTKINSLAG-IKIIQVSCGHYHSLALSEDGQVFSW 157
Query: 276 GMEK----GLG--LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G + GLG LC AS + ++ + I P+ QVA G H+ +
Sbjct: 158 GSNRQGQLGLGNNLCSQASPQKVKSLEGI-PL---------------AQVAAGGTHSFAL 201
Query: 330 TDDGYKLWSWGRGRSGVL 347
+ G + WG RSG L
Sbjct: 202 SLMGTS-FGWGNNRSGQL 218
Score = 164 (62.8 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 60/227 (26%), Positives = 104/227 (45%)
Query: 56 APDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFS 111
+P S + + + I V G S+A+ + G ++ WG + +EG G S
Sbjct: 64 SPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG------AGSEGQLGIGES 117
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
SF P+ + G +++V+CG H +AL G+ + SWG+N GQLGLG+
Sbjct: 118 KEISFMPTKINSLAGIKIIQVSCGHYHSLALSEDGQVF--------SWGSNRQGQLGLGN 169
Query: 172 RE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL-GENGQ 229
S+ P+ +++ + P A +V G H+ L+ M S W G+
Sbjct: 170 NLCSQASPQKVKSL-EGIPLA--QVAAGGTHSFALSL------MGTSFGWGNNRSGQLAL 220
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
G+ + P + L + + +V + CG HTSV++ G V+++G
Sbjct: 221 SGNSAKEQIYKPHSIGAL-KTLNVVYISCGYEHTSVLTEDGQVFTFG 266
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 44/136 (32%), Positives = 69/136 (50%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
+ G+N GQLG + QS PE ++ L V++ V CG H+ V G V++WG
Sbjct: 50 YSCGDNSRGQLGQKSPQSTKRPEPIQALST-VHIDLVSCGKEHSVAVCHQGRVFTWGAGS 108
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
E LG+ + ++ P I N G K +QV+CG H++ +++DG +++
Sbjct: 109 EGQLGIGESKEIS-------FMPTKI--NSLAGIKI---IQVSCGHYHSLALSEDG-QVF 155
Query: 338 SWGRGRSGVLGTGKTI 353
SWG R G LG G +
Sbjct: 156 SWGSNRQGQLGLGNNL 171
Score = 124 (48.7 bits), Expect = 0.00046, P = 0.00046
Identities = 47/179 (26%), Positives = 70/179 (39%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
Y SL DGQ+ GSN + L S K I + V AGG
Sbjct: 143 YHSLALSEDGQVFSWGSNRQGQLGLGNNLC-----SQASPQKVKSLEGIPLAQVAAGGTH 197
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S A+ G + WGN + G + + P + VV ++CG EH L
Sbjct: 198 SFALSLMGTSFGWGNNRSGQLALSGNSAKEQIYKPHSIGALKTLNVVYISCGYEHTSVLT 257
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ + ++G +++ QL R R P++IE V ++ CGS+HT
Sbjct: 258 EDGQVF--------TFGGSSSEQLQHSPRSGRGGPQLIEGIGGH----VSQIECGSYHT 304
>TAIR|locus:2079147 [details] [associations]
symbol:AT3G47660 "AT3G47660" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0008536
"Ran GTPase binding" evidence=ISS] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR000306 Pfam:PF01363 SMART:SM00064
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0046872 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 IPI:IPI00548806 RefSeq:NP_190350.4 UniGene:At.48747
UniGene:At.66547 ProteinModelPortal:F4JCN3 SMR:F4JCN3 PRIDE:F4JCN3
EnsemblPlants:AT3G47660.1 GeneID:823920 KEGG:ath:AT3G47660
OMA:CLSHEIS ArrayExpress:F4JCN3 Uniprot:F4JCN3
Length = 954
Score = 174 (66.3 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 85/316 (26%), Positives = 135/316 (42%)
Query: 57 PDSLEDDSKTNHKAP------IKICSVKAGGMMSLAIDNAGAL---WMWGNCPLPDSSTE 107
P+++E+ TNH +P I S + ++ +L ++WG + D
Sbjct: 214 PETIEN-RPTNHSSPGVDTSKYSISSAVSSSSQGSTFEDLKSLCDVFVWGES-IGDGLLG 271
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVK--VACGSEHVVALVSAGETYK---GEDLVCYSWGAN 162
GG S + S + D V+K VA ++ + S G Y + YSWG
Sbjct: 272 GGMHKSGS-SSSLMTDSFLPKVLKSHVALDAQSI----SCGTNYAVLVTKQGQMYSWGEE 326
Query: 163 NNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTF 222
+ G+LG G PK+I+ FN + V CG FHT +T D+ W
Sbjct: 327 SGGRLGHGVCSYVPHPKLIDEFNGST---VELADCGEFHTCAVT---ASGDLY---AWGD 377
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
G G LG G+ S P ++ + +Y+ ++ CG +HT+ V+S G ++++G + G
Sbjct: 378 GDHNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWHTAFVTSEGKLFTFG-DGTFG 436
Query: 283 LCPNASLTRNEAGDAISP-ILISGNGPHGPKFQDPVQVACGAAHTVLV-------TDDGY 334
+ GD IS I +G + ++ ACG H+ V T G
Sbjct: 437 ALGH--------GDRISTNIPREVEALNGCR---TIKAACGVWHSAAVVSVFGEATSSG- 484
Query: 335 KLWSWGRGRSGVLGTG 350
KL++WG G G LG G
Sbjct: 485 KLFTWGDGDDGRLGHG 500
Score = 152 (58.6 bits), Expect = 3.8e-07, P = 3.8e-07
Identities = 56/187 (29%), Positives = 86/187 (45%)
Query: 157 YSWGA--NNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
Y+WG +N G LGLG S +P + Q V ++CG +HTA +T
Sbjct: 373 YAWGDGDHNAGLLGLGSGASHWKP--VRILGQMEGIYVKAISCGPWHTAFVTS------- 423
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS-VVSSAGDVW 273
E +TFG G G LGHG S +P +V+ L + CG++H++ VVS G+
Sbjct: 424 -EGKLFTFGDGTFGALGHGDRISTNIPREVEAL-NGCRTIKAACGVWHSAAVVSVFGEAT 481
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
S G G + L + + P ++ FQ QVACG + TV ++ G
Sbjct: 482 SSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDT--TSFQ---QVACGQSITVALSMSG 536
Query: 334 YKLWSWG 340
++++ G
Sbjct: 537 -QVYAMG 542
Score = 150 (57.9 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 53/198 (26%), Positives = 87/198 (43%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVKVACGSEH 138
G + A+ +G L+ WG+ ++ G S S + P + G V ++CG H
Sbjct: 359 GEFHTCAVTASGDLYAWGDGD-HNAGLLGLGSGASHWKPVRILGQMEGIYVKAISCGPWH 417
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+ S G+ + ++G G LG GDR S P+ +E N + CG
Sbjct: 418 TAFVTSEGKLF--------TFGDGTFGALGHGDRISTNIPREVEALNG---CRTIKAACG 466
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
+H+A + +T+G G++G+LGHG + L+P V EL + V C
Sbjct: 467 VWHSAAVVS-VFGEATSSGKLFTWGDGDDGRLGHGDIECRLIPSCVTELDTTSFQ-QVAC 524
Query: 259 GLFHTSVVSSAGDVWSWG 276
G T +S +G V++ G
Sbjct: 525 GQSITVALSMSGQVYAMG 542
Score = 76 (31.8 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 23/73 (31%), Positives = 37/73 (50%)
Query: 290 TRNEAGDAI-SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
T + + D + +P I G G F +VACG H + V + ++++WG+G +G LG
Sbjct: 543 TADPSHDIVRAPSCIEGG--LGKSFVQ--EVACGFHH-IAVLNSKAEVYTWGKGSNGQLG 597
Query: 349 TGKTIDFFAPAIV 361
G T P +V
Sbjct: 598 HGDTEYRCMPTLV 610
Score = 66 (28.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ V CG H +V++S +V++WG KG N L + P L+
Sbjct: 565 FVQEVACGFHHIAVLNSKAEVYTWG--KG----SNGQLGHGDTEYRCMPTLVKAL----- 613
Query: 312 KFQDPVQVACGAAHTVLV 329
K + +V CG+ +T +
Sbjct: 614 KGKQVRKVVCGSNYTATI 631
>TAIR|locus:2159295 [details] [associations]
symbol:RUG3 "RCC1/UVR8/GEF-like 3" species:3702
"Arabidopsis thaliana" [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0008380 "RNA splicing"
evidence=IMP] [GO:0032981 "mitochondrial respiratory chain complex
I assembly" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 EMBL:CP002688 GO:GO:0008380 EMBL:AB015472
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0032981
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 UniGene:At.29139
UniGene:At.50545 HSSP:P18754 IPI:IPI00532631 RefSeq:NP_200895.2
ProteinModelPortal:Q9FJG9 SMR:Q9FJG9 PRIDE:Q9FJG9
EnsemblPlants:AT5G60870.1 GeneID:836208 KEGG:ath:AT5G60870
TAIR:At5g60870 HOGENOM:HOG000030010 InParanoid:Q9FJG9 OMA:ISCGLFH
PhylomeDB:Q9FJG9 ProtClustDB:CLSN2681113 Genevestigator:Q9FJG9
Uniprot:Q9FJG9
Length = 445
Score = 172 (65.6 bits), Expect = 7.5e-10, P = 7.5e-10
Identities = 72/250 (28%), Positives = 109/250 (43%)
Query: 109 GFSLVSS-FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
GF +S F P+ F H++ +A G H VAL T++G+ ++WG G L
Sbjct: 133 GFGQENSVFVPNLNPLFEEHSIRCIALGGLHSVAL-----THQGD---VFTWGYGGFGAL 184
Query: 168 GLGDRESRLRPKIIETFNQDSPW--AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
G L P+ ++ DS W + + HTA +T E W G
Sbjct: 185 GHKVYTRELVPRRVD----DS-WDCKISAIATSGTHTAAITESG------ELYMWGREEG 233
Query: 226 ENGQLGHGTTQSA------LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ G+LG G + VP +VK L V + SV CG F T ++ G +W+WG
Sbjct: 234 D-GRLGLGPGRGPNEGGGLSVPSKVKALT--VPVASVSCGGFFTMALTKEGQLWNWGANS 290
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
N L R + P+ + G + Q+ACG H++ +T++G K+ SW
Sbjct: 291 ------NYELGRGDNLGGWEPMPVPSL--EGVRI---TQIACGGYHSLALTEEG-KVLSW 338
Query: 340 GRGRSGVLGT 349
G G G LG+
Sbjct: 339 GHGGHGQLGS 348
Score = 159 (61.0 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 54/189 (28%), Positives = 83/189 (43%)
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
+ G H+ LTH+ D+ +T+G G G LGH LVP +V +
Sbjct: 157 IALGGLHSVALTHQ---GDV-----FTWGYGGFGALGHKVYTRELVPRRVDDSWDCKISA 208
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKG---LGLCPNASLTRNEAGDAISPILISGNGPHGP 311
G HT+ ++ +G+++ WG E+G LGL P NE G P +
Sbjct: 209 IATSGT-HTAAITESGELYMWGREEGDGRLGLGPGRG--PNEGGGLSVPSKVKA------ 259
Query: 312 KFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
PV V+CG T+ +T +G +LW+WG + LG G + + P V P E
Sbjct: 260 -LTVPVASVSCGGFFTMALTKEG-QLWNWGANSNYELGRGDNLGGWEPMPV---PSLEGV 314
Query: 371 KQDELNTGG 379
+ ++ GG
Sbjct: 315 RITQIACGG 323
Score = 147 (56.8 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 55/210 (26%), Positives = 88/210 (41%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIET--FNQDSPWAV------YEVTCGSFHTALL 205
L +SWG +GQLG G E R+ P + F D +++ + SF +
Sbjct: 48 LQLFSWGRGASGQLGGGIEEIRMYPSPVANLLFRSDQSFSLAQTPGRIDADSSSFRIGIS 107
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
++ W +G G+ G+LG G S VP + L + + + G H+
Sbjct: 108 CGLFHSGLTIDGDLWIWGKGDGGRLGFGQENSVFVPN-LNPLFEEHSIRCIALGGLHSVA 166
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
++ GDV++WG G G + TR + P + + K +A H
Sbjct: 167 LTHQGDVFTWGYG-GFGALGHKVYTRE-----LVPRRVDDSWDC--KIS---AIATSGTH 215
Query: 326 TVLVTDDGYKLWSWGR----GRSGVLGTGK 351
T +T+ G +L+ WGR GR G LG G+
Sbjct: 216 TAAITESG-ELYMWGREEGDGRLG-LGPGR 243
Score = 136 (52.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 50/194 (25%), Positives = 83/194 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN---------CPLPDSSTEGGFSLVSSFTPSPVWD 123
KI ++ G + AI +G L+MWG P + GG S+ S V
Sbjct: 205 KISAIATSGTHTAAITESGELYMWGREEGDGRLGLGPGRGPNEGGGLSVPSKVKALTV-- 262
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
V V+CG +AL G+ + +WGAN+N +LG GD P + +
Sbjct: 263 ----PVASVSCGGFFTMALTKEGQLW--------NWGANSNYELGRGDNLGGWEPMPVPS 310
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
+ ++ CG +H+ LT + + W G G +GQLG + ++ VP +
Sbjct: 311 LEGVR---ITQIACGGYHSLALTEEGKV------LSW--GHGGHGQLGSSSLRNQKVPTE 359
Query: 244 VKELP--QYVYLVS 255
++ L + V++ S
Sbjct: 360 IEALADKKIVFIAS 373
Score = 132 (51.5 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 34/112 (30%), Positives = 51/112 (45%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTE-GGFSLVSSFTPSPVWDFHGHTVV 130
+ + SV GG ++A+ G LW WG +S+ E G + + P PV G +
Sbjct: 262 VPVASVSCGGFFTMALTKEGQLWNWG----ANSNYELGRGDNLGGWEPMPVPSLEGVRIT 317
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
++ACG H +AL G+ SWG +GQLG ++ P IE
Sbjct: 318 QIACGGYHSLALTEEGKVL--------SWGHGGHGQLGSSSLRNQKVPTEIE 361
Score = 125 (49.1 bits), Expect = 0.00012, P = 0.00012
Identities = 37/133 (27%), Positives = 56/133 (42%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W +G N +LG G P V L + V + + CG +H+ ++ G V SW
Sbjct: 280 EGQLWNWGANSNYELGRGDNLGGWEPMPVPSL-EGVRITQIACGGYHSLALTEEGKVLSW 338
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G G ++SL + I + K V +A G + + +TD G +
Sbjct: 339 G-HGGHGQLGSSSLRNQKVPTEIEALA-------DKKI---VFIASGGSSSAAITDGG-E 386
Query: 336 LWSWGRGRSGVLG 348
LW WG + LG
Sbjct: 387 LWMWGNAKDFQLG 399
>MGI|MGI:1919784 [details] [associations]
symbol:Rcc2 "regulator of chromosome condensation 2"
species:10090 "Mus musculus" [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0051301 "cell division"
evidence=IEA] MGI:MGI:1919784 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0000775 GO:GO:0005730 GO:GO:0051301
GO:GO:0007067 GO:GO:0005819 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0005874 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 EMBL:AL954710 eggNOG:COG5184
GeneTree:ENSGT00700000104160 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AK076040
EMBL:BC086666 EMBL:AK129370 IPI:IPI00222509 RefSeq:NP_776292.1
UniGene:Mm.253 ProteinModelPortal:Q8BK67 SMR:Q8BK67 STRING:Q8BK67
PhosphoSite:Q8BK67 PaxDb:Q8BK67 PRIDE:Q8BK67
Ensembl:ENSMUST00000038893 Ensembl:ENSMUST00000071169 GeneID:108911
KEGG:mmu:108911 UCSC:uc008vna.2 InParanoid:A2AWQ3 ChiTaRS:RCC2
NextBio:361459 Bgee:Q8BK67 CleanEx:MM_RCC2 Genevestigator:Q8BK67
GermOnline:ENSMUSG00000040945 Uniprot:Q8BK67
Length = 520
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 74/247 (29%), Positives = 111/247 (44%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
TVV +C + H + + + G+ + SWG N GQLG GD + P++IE + +
Sbjct: 150 TVVSGSCAA-HSLLITTEGKLW--------SWGRNEKGQLGHGDTKRVEAPRLIEALSHE 200
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
A+ CG HT LT + FG + GQLG G Q+ VP + +
Sbjct: 201 ---AIVLAACGRNHTLALTDT--------GSVFAFGENKMGQLGLGN-QTDAVPSPAQIM 248
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPN----ASLTRNEAGDAISP- 300
+ + CG + ++ G+++S+G E G LG + A R E + P
Sbjct: 249 YNGQPITKMACGAEFSMLMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 308
Query: 301 ---ILI--SGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
I I + +G P V+ VACGA HT LV D +++SWG G G LG + D
Sbjct: 309 RVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKD 367
Query: 355 FFAPAIV 361
P +V
Sbjct: 368 EMVPRLV 374
>UNIPROTKB|Q9P258 [details] [associations]
symbol:RCC2 "Protein RCC2" species:9606 "Homo sapiens"
[GO:0005874 "microtubule" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005819
"spindle" evidence=IEA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 Reactome:REACT_115566 Reactome:REACT_21300
GO:GO:0000775 GO:GO:0005730 GO:GO:0051301 GO:GO:0005819
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005874
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0000236 CTD:55920 HOGENOM:HOG000232061
HOVERGEN:HBG080538 OMA:FGENKLG OrthoDB:EOG4DNF4B EMBL:AJ421269
EMBL:AB040903 EMBL:BC004933 EMBL:BC042141 EMBL:BC053908
EMBL:AL359612 IPI:IPI00465044 PIR:T50630 RefSeq:NP_001129676.1
RefSeq:NP_061185.1 UniGene:Hs.380857 ProteinModelPortal:Q9P258
SMR:Q9P258 IntAct:Q9P258 STRING:Q9P258 PhosphoSite:Q9P258
DMDM:71152033 SWISS-2DPAGE:Q9P258 PaxDb:Q9P258 PeptideAtlas:Q9P258
PRIDE:Q9P258 Ensembl:ENST00000375433 Ensembl:ENST00000375436
GeneID:55920 KEGG:hsa:55920 UCSC:uc001bal.3 GeneCards:GC01M017733
HGNC:HGNC:30297 MIM:609587 neXtProt:NX_Q9P258 PharmGKB:PA142671091
InParanoid:Q9P258 GenomeRNAi:55920 NextBio:61323 Bgee:Q9P258
CleanEx:HS_RCC2 Genevestigator:Q9P258 GermOnline:ENSG00000179051
Uniprot:Q9P258
Length = 522
Score = 172 (65.6 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 73/247 (29%), Positives = 110/247 (44%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
TVV +C + H + + + G+ + SWG N GQLG GD + P++IE + +
Sbjct: 152 TVVSGSCAA-HSLLITTEGKLW--------SWGRNEKGQLGHGDTKRVEAPRLIEGLSHE 202
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ CG HT LT + FG + GQLG G Q+ VP + +
Sbjct: 203 ---VIVSAACGRNHTLALTET--------GSVFAFGENKMGQLGLGN-QTDAVPSPAQIM 250
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPN----ASLTRNEAGDAISP- 300
+ + CG + ++ G+++S+G E G LG + A R E + P
Sbjct: 251 YNGQPITKMACGAEFSMIMDCKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPR 310
Query: 301 ---ILI--SGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
I I + +G P V+ VACGA HT LV D +++SWG G G LG + D
Sbjct: 311 RVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKD 369
Query: 355 FFAPAIV 361
P +V
Sbjct: 370 EMVPRLV 376
>UNIPROTKB|F1LPM8 [details] [associations]
symbol:Herc6 "Protein Herc6" species:10116 "Rattus
norvegicus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
RGD:1561739 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0016567 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
EMBL:AC126722 IPI:IPI00553869 Ensembl:ENSRNOT00000058626
ArrayExpress:F1LPM8 Uniprot:F1LPM8
Length = 1036
Score = 176 (67.0 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 56/191 (29%), Positives = 89/191 (46%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G ++K A G H + L S Y C G N+ GQLG +S RP+ E
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVYS-----C---GDNSRGQLGQKSPQSTKRPE--EPIQ 76
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV 244
S + V+CG H+ + H+ R +T+G G GQLG G ++ + +P ++
Sbjct: 77 ALSTVHIDLVSCGKEHSVAVCHQGR--------VFTWGAGSEGQLGIGESKEISFMPTKI 128
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAI 298
L + ++ V CG +H+ +S G V+SWG + GLG LC AS + ++ + I
Sbjct: 129 NSLAG-IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI 187
Query: 299 SPILISGNGPH 309
++ G H
Sbjct: 188 PLAQVAAGGTH 198
Score = 165 (63.1 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 71/247 (28%), Positives = 113/247 (45%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPSPVWDFHGH 127
+ I V G S+A+ + G ++ WG + +EG G S SF P+ + G
Sbjct: 81 VHIDLVSCGKEHSVAVCHQGRVFTWG------AGSEGQLGIGESKEISFMPTKINSLAGI 134
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQ 186
+++V+CG H +AL G+ + SWG+N GQLGLG+ S+ P+ +++ +
Sbjct: 135 KIIQVSCGHYHSLALSEDGQVF--------SWGSNRQGQLGLGNNLCSQASPQKVKSL-E 185
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSA---LVPE 242
P A +V G H+ L+ M S W G +GQL G + A P
Sbjct: 186 GIPLA--QVAAGGTHSFALSL------MGTSFGW--GNNRSGQLALSGNSAKAEQIYKPH 235
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+ L + + +V + CG HTSV++ G V+++G L + R+ G P L
Sbjct: 236 SIGAL-KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQHSP---RSGRG---GPQL 288
Query: 303 ISGNGPH 309
I G G H
Sbjct: 289 IEGIGGH 295
Score = 145 (56.1 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 43/136 (31%), Positives = 68/136 (50%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
+ G+N GQLG + QS PE+ + V++ V CG H+ V G V++WG
Sbjct: 50 YSCGDNSRGQLGQKSPQSTKRPEEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWGAGS 109
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
E LG+ + ++ P I N G K +QV+CG H++ +++DG +++
Sbjct: 110 EGQLGIGESKEIS-------FMPTKI--NSLAGIKI---IQVSCGHYHSLALSEDG-QVF 156
Query: 338 SWGRGRSGVLGTGKTI 353
SWG R G LG G +
Sbjct: 157 SWGSNRQGQLGLGNNL 172
Score = 128 (50.1 bits), Expect = 0.00017, P = 0.00017
Identities = 44/147 (29%), Positives = 64/147 (43%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD 123
+K N A IKI V G SLA+ G ++ WG+ G +L S +P V
Sbjct: 126 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGL--GNNLCSQASPQKVKS 183
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL----RPK 179
G + +VA G H AL G ++ WG N +GQL L ++ +P
Sbjct: 184 LEGIPLAQVAAGGTHSFALSLMGTSF--------GWGNNRSGQLALSGNSAKAEQIYKPH 235
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLT 206
I + VY ++CG HT++LT
Sbjct: 236 SIGALKTLN--VVY-ISCGYEHTSVLT 259
Score = 122 (48.0 bits), Expect = 0.00077, P = 0.00077
Identities = 39/129 (30%), Positives = 60/129 (46%)
Query: 220 WTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+T+G G GQLG G ++ + +P ++ L + ++ V CG +H+ +S G V+SWG
Sbjct: 103 FTWGAGSEGQLGIGESKEISFMPTKINSLAG-IKIIQVSCGHYHSLALSEDGQVFSWGSN 161
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L L N A SP + G QVA G H+ ++ G +
Sbjct: 162 RQGQL----GLGNNLCSQA-SPQKVKSL--EGIPL---AQVAAGGTHSFALSLMGTS-FG 210
Query: 339 WGRGRSGVL 347
WG RSG L
Sbjct: 211 WGNNRSGQL 219
>POMBASE|SPBC557.03c [details] [associations]
symbol:pim1 "Ran GDP/GTP exchange factor" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005087 "Ran guanyl-nucleotide exchange factor
activity" evidence=IGI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006406 "mRNA export from nucleus" evidence=IMP] [GO:0006407
"rRNA export from nucleus" evidence=ISO] [GO:0007093 "mitotic cell
cycle checkpoint" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IC] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IMP] [GO:0030071 "regulation of
mitotic metaphase/anaphase transition" evidence=IMP] [GO:0031291
"Ran protein signal transduction" evidence=IGI] [GO:0032888
"regulation of mitotic spindle elongation" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=IMP] [GO:0060623 "regulation of chromosome
condensation" evidence=IGI] [GO:1901673 "regulation of spindle
assembly involved in mitosis" evidence=IMP] PomBase:SPBC557.03c
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0051301 GO:GO:0030071
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000790
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0006406
GO:GO:0090307 GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0007093 eggNOG:COG5184
GO:GO:0060623 GO:GO:0042992 GO:GO:0006407 GO:GO:0031291 EMBL:M73528
PIR:B40039 PIR:T50368 RefSeq:NP_596026.1 ProteinModelPortal:P28745
STRING:P28745 EnsemblFungi:SPBC557.03c.1 GeneID:2541059
KEGG:spo:SPBC557.03c HOGENOM:HOG000170207 OMA:KGIVYAW
OrthoDB:EOG466ZVF NextBio:20802173 Uniprot:P28745
Length = 539
Score = 171 (65.3 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 77/308 (25%), Positives = 129/308 (41%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ V ++ AI + G + WG D G+S T P + +
Sbjct: 174 LRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVL--GYSDSQKRTAEPT-QMRLPEICQ 230
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR----LRPKIIETFNQD 187
+A G++H++AL + G+ Y +WG QLG E R L P+ + N
Sbjct: 231 LATGTDHIIALTTTGKVY--------TWGNGQQFQLGRRMLERRRLQGLTPQPLALKN-- 280
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG---HGTTQSALV--PE 242
+ V GS+H+ + ++ R + +GL Q G + A++ P
Sbjct: 281 ----IISVGAGSYHSFAIDNKGR--------VYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNA---SLTRNEAGDA 297
V L Y + S+ G HT + G V +WG + LG+ NA ++ ++E G+
Sbjct: 329 LVDALEGY-NVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNN 387
Query: 298 I---SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI- 353
+P +I G + +QV CG H + VT DG K++SWG + +G G
Sbjct: 388 YYLSTPTIIPG-------LTNVIQVVCGTHHNLAVTSDG-KVYSWGSAENYEVGQGDNDE 439
Query: 354 DFFAPAIV 361
D P +V
Sbjct: 440 DVAVPTLV 447
>TAIR|locus:2165770 [details] [associations]
symbol:AT5G42140 "AT5G42140" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005576
"extracellular region" evidence=ISM] [GO:0008270 "zinc ion binding"
evidence=ISS] [GO:0008536 "Ran GTPase binding" evidence=ISS]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007165 "signal
transduction" evidence=ISS] [GO:0035091 "phosphatidylinositol
binding" evidence=ISS] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002688
GenomeReviews:BA000015_GR Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0046872 EMBL:AB017067 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 InterPro:IPR013591 Pfam:PF08381 PROSITE:PS51514
HSSP:Q15075 ProtClustDB:CLSN2686442 IPI:IPI00533393
RefSeq:NP_199029.1 UniGene:At.28039 ProteinModelPortal:Q9FHX1
SMR:Q9FHX1 PRIDE:Q9FHX1 EnsemblPlants:AT5G42140.1 GeneID:834219
KEGG:ath:AT5G42140 TAIR:At5g42140 HOGENOM:HOG000240974
InParanoid:Q9FHX1 OMA:RNEVFTW PhylomeDB:Q9FHX1
Genevestigator:Q9FHX1 Uniprot:Q9FHX1
Length = 1073
Score = 175 (66.7 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 61/235 (25%), Positives = 98/235 (41%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++I SV G + I + G L+ +G+ G + F P V G +
Sbjct: 379 LQIASVSCGPWHTALITSTGQLFTFGDGTF---GVLGHGDKETVFYPREVESLSGLRTIA 435
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V T+ + ++WG + +LG GD+E RL+P + +
Sbjct: 436 VACGVWHAAAIVEVIVTHSSSSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHT 495
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG T LT +T G GQLG+ L P V++
Sbjct: 496 ---FHRVACGHSLTVGLT--------TSGKVYTMGSTVYGQLGNPNADGKL-PCLVEDKL 543
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
+ + CG +H +V++S +V++WG KG N L + D +P L+
Sbjct: 544 TKDCVEEIACGAYHVAVLTSRNEVFTWG--KGA----NGRLGHGDVEDRKAPTLV 592
Score = 173 (66.0 bits), Expect = 2.3e-09, P = 2.3e-09
Identities = 63/213 (29%), Positives = 102/213 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA-----LLTHRKRP 211
+++G G LG GD+E+ P+ +E+ S V CG +H A ++TH
Sbjct: 401 FTFGDGTFGVLGHGDKETVFYPREVESL---SGLRTIAVACGVWHAAAIVEVIVTHSS-- 455
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +T+G G+ +LGHG + L P V L + + V CG T ++++G
Sbjct: 456 SSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTCVSALIDHTFH-RVACGHSLTVGLTTSGK 514
Query: 272 VWSWGMEK-G-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVL 328
V++ G G LG PNA D P L+ +D V+ +ACGA H +
Sbjct: 515 VYTMGSTVYGQLGN-PNA--------DGKLPCLVEDK-----LTKDCVEEIACGAYHVAV 560
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T ++++WG+G +G LG G D AP +V
Sbjct: 561 LTSRN-EVFTWGKGANGRLGHGDVEDRKAPTLV 592
Score = 165 (63.1 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 57/204 (27%), Positives = 92/204 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG + G+LG G + P++IE+ S + V CG FHT +T E
Sbjct: 294 FTWGEASGGRLGHGMGKDVTGPQLIESLAATS---IDFVACGEFHTCAVTMTG------E 344
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W G G LGHGT S +P+++ + + + SV CG +HT++++S G ++++G
Sbjct: 345 IYTWGDGTHNAGLLGHGTDVSHWIPKRISGPLEGLQIASVSCGPWHTALITSTGQLFTFG 404
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT-----VLVTD 331
+ G+ L + P + G + + VACG H V+VT
Sbjct: 405 -DGTFGV-----LGHGDKETVFYPREVESLS--GLR---TIAVACGVWHAAAIVEVIVTH 453
Query: 332 DGY-----KLWSWGRGRSGVLGTG 350
KL++WG G LG G
Sbjct: 454 SSSSVSSGKLFTWGDGDKSRLGHG 477
Score = 156 (60.0 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 54/213 (25%), Positives = 94/213 (44%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT 128
A I V G + A+ G ++ WG+ ++ G + VS + P + G
Sbjct: 322 AATSIDFVACGEFHTCAVTMTGEIYTWGD-GTHNAGLLGHGTDVSHWIPKRISGPLEGLQ 380
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ V+CG H + S G+ + ++G G LG GD+E+ P+ +E+ S
Sbjct: 381 IASVSCGPWHTALITSTGQLF--------TFGDGTFGVLGHGDKETVFYPREVESL---S 429
Query: 189 PWAVYEVTCGSFHTA-----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
V CG +H A ++TH + + +T+G G+ +LGHG + L P
Sbjct: 430 GLRTIAVACGVWHAAAIVEVIVTHSS--SSVSSGKLFTWGDGDKSRLGHGDKEPRLKPTC 487
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
V L + + V CG T ++++G V++ G
Sbjct: 488 VSALIDHTFH-RVACGHSLTVGLTTSGKVYTMG 519
Score = 151 (58.2 bits), Expect = 5.7e-07, P = 5.7e-07
Identities = 49/143 (34%), Positives = 71/143 (49%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+LGHG + P+ ++ L + V CG FHT V+ G++++WG
Sbjct: 294 FTWGEASGGRLGHGMGKDVTGPQLIESLAA-TSIDFVACGEFHTCAVTMTGEIYTWG--D 350
Query: 280 GLGLCPNASLTRNEAGDAIS---PILISGNGP-HGPKFQDPVQVACGAAHTVLVTDDGYK 335
G NA L + G +S P ISG P G + V+CG HT L+T G +
Sbjct: 351 GTH---NAGLLGH--GTDVSHWIPKRISG--PLEGLQI---ASVSCGPWHTALITSTG-Q 399
Query: 336 LWSWGRGRSGVLGTGKTIDFFAP 358
L+++G G GVLG G F P
Sbjct: 400 LFTFGDGTFGVLGHGDKETVFYP 422
Score = 142 (55.0 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 59/213 (27%), Positives = 87/213 (40%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKVA 133
C VK ++S G ++ WG S G + T P + ++ VA
Sbjct: 279 CGVKHAALVS----RQGEVFTWGEA----SGGRLGHGMGKDVTGPQLIESLAATSIDFVA 330
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H A+ GE Y D G +N G LG G S PK I +
Sbjct: 331 CGEFHTCAVTMTGEIYTWGD------GTHNAGLLGHGTDVSHWIPKRIS--GPLEGLQIA 382
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY--- 250
V+CG +HTAL+T +TFG G G LGHG ++ P +V+ L
Sbjct: 383 SVSCGPWHTALITST--------GQLFTFGDGTFGVLGHGDKETVFYPREVESLSGLRTI 434
Query: 251 -----VYLVS--VDCGLFHTSVVSSAGDVWSWG 276
V+ + V+ + H+S S+G +++WG
Sbjct: 435 AVACGVWHAAAIVEVIVTHSSSSVSSGKLFTWG 467
Score = 138 (53.6 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 40/135 (29%), Positives = 70/135 (51%)
Query: 146 GETYKGEDLVCYS---WGANNNGQLG-LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
G+ Y +++C + +GA+ N +G LG R L PK +E+ + V+ + CG H
Sbjct: 229 GDVYIWGEVLCENVTKFGADKN--IGYLGSRSDVLIPKPLES---NVVLDVHHIACGVKH 283
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
AL++ R ++ +T+G G+LGHG + P+ ++ L + V CG F
Sbjct: 284 AALVS---RQGEV-----FTWGEASGGRLGHGMGKDVTGPQLIESLAA-TSIDFVACGEF 334
Query: 262 HTSVVSSAGDVWSWG 276
HT V+ G++++WG
Sbjct: 335 HTCAVTMTGEIYTWG 349
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 42/146 (28%), Positives = 67/146 (45%)
Query: 222 FGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
FG +N +G+ G+ L+P+ + E + + + CG+ H ++VS G+V++WG G
Sbjct: 245 FGADKN--IGYLGSRSDVLIPKPL-ESNVVLDVHHIACGVKHAALVSRQGEVFTWGEASG 301
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L D P LI F VACG HT VT G ++++WG
Sbjct: 302 ------GRLGHGMGKDVTGPQLIESLAATSIDF-----VACGEFHTCAVTMTG-EIYTWG 349
Query: 341 RG--RSGVLGTGKTIDFFAPAIVLWP 364
G +G+LG G + + P + P
Sbjct: 350 DGTHNAGLLGHGTDVSHWIPKRISGP 375
Score = 130 (50.8 bits), Expect = 0.00011, P = 0.00011
Identities = 45/152 (29%), Positives = 74/152 (48%)
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFH 201
++ G T G+ Y+ G+ GQLG + + +L P ++E +D V E+ CG++H
Sbjct: 505 LTVGLTTSGK---VYTMGSTVYGQLGNPNADGKL-PCLVEDKLTKD---CVEEIACGAYH 557
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
A+LT R N++ +T+G G NG+LGHG + P V L + ++ ++ CG
Sbjct: 558 VAVLTSR---NEV-----FTWGKGANGRLGHGDVEDRKAPTLVDALKER-HVKNIACGSN 608
Query: 262 HTSVVSSAGDVWSWGMEKG-LGLCPNA-SLTR 291
T+ + W G E+ C A TR
Sbjct: 609 FTAAICL--HKWVSGTEQSQCSACRQAFGFTR 638
>MGI|MGI:1917200 [details] [associations]
symbol:Rcbtb2 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 2" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651
PROSITE:PS50097 SMART:SM00225 MGI:MGI:1917200 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 CTD:1102 OrthoDB:EOG4M91R6
ChiTaRS:RCBTB2 EMBL:AK031242 EMBL:AK031248 EMBL:AK160881
EMBL:BC003224 IPI:IPI00308981 IPI:IPI00661148 RefSeq:NP_001164165.1
RefSeq:NP_598844.3 UniGene:Mm.280068 ProteinModelPortal:Q99LJ7
SMR:Q99LJ7 STRING:Q99LJ7 PhosphoSite:Q99LJ7 PaxDb:Q99LJ7
PRIDE:Q99LJ7 Ensembl:ENSMUST00000022702 Ensembl:ENSMUST00000110952
Ensembl:ENSMUST00000164822 Ensembl:ENSMUST00000169479
Ensembl:ENSMUST00000169513 Ensembl:ENSMUST00000170677 GeneID:105670
KEGG:mmu:105670 UCSC:uc007upj.2 UCSC:uc007upm.2 InParanoid:Q99LJ7
OMA:QMCSMAV NextBio:357822 Bgee:Q99LJ7 Genevestigator:Q99LJ7
GermOnline:ENSMUSG00000022106 Uniprot:Q99LJ7
Length = 551
Score = 163 (62.4 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 42/135 (31%), Positives = 70/135 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G +GQ+G G+T + +P +V Q ++++ CG + V G+V+ W
Sbjct: 172 EVFAW--GYNNSGQVGSGSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVW 229
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L +G+ +P ++ G + Q +VACG AHT+++TD+G +
Sbjct: 230 GYN---G---NGQLGLGSSGNQPTPCRVAAL--QGIRVQ---RVACGYAHTLVLTDEG-Q 277
Query: 336 LWSWGRGRSGVLGTG 350
+++WG G LGTG
Sbjct: 278 IYAWGANSYGQLGTG 292
Score = 161 (61.7 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 55/196 (28%), Positives = 93/196 (47%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF-HTALLTHRKRPNDMLESM 218
G N +G LG+GD +S + P+ +++ + ++ GS H L T +
Sbjct: 71 GTNCSGCLGVGDIQSTIEPRRLDSLTGKK---IASLSYGSGPHIVLAT--------TDGE 119
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+T+G QLG+GTT LVP + ++ V CG +H+ V++S G+V++WG
Sbjct: 120 VFTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYN 179
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKL 336
G + S T N+ P ++G Q+ V +ACG ++ V D G ++
Sbjct: 180 NS-GQVGSGS-TANQP----IPRRVTGC------LQNKVVMNIACGQMCSMAVVDTG-EV 226
Query: 337 WSWGRGRSGVLGTGKT 352
+ WG +G LG G +
Sbjct: 227 YVWGYNGNGQLGLGSS 242
Score = 129 (50.5 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 40/134 (29%), Positives = 64/134 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMNIACGQMCSMAVVDTGEVYVWGY------NGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + +D
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYPTPV-VVEKDR-- 309
Query: 191 AVYEVT-CGSFHTA 203
+ E+ C S HT+
Sbjct: 310 -IIEIAACHSAHTS 322
Score = 125 (49.1 bits), Expect = 0.00016, P = 0.00016
Identities = 38/125 (30%), Positives = 51/125 (40%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG ++ P + V V CG HT +LT E
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAALQGIR---VQRVACGYAHTLVLTD--------E 275
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ +G GQLG G + P V + ++ C HTS + G V+ W
Sbjct: 276 GQIYAWGANSYGQLGTGNKSNQSYPTPVVVEKDRIIEIAA-CHSAHTSAAKTQGGHVYMW 334
Query: 276 GMEKG 280
G +G
Sbjct: 335 GQCRG 339
Score = 113 (44.8 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 51/182 (28%), Positives = 78/182 (42%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +G NGQLG G++ + P +V L Q + + V CG HT V++ G +++WG
Sbjct: 227 YVWGYNGNGQLGLGSSGNQPTPCRVAAL-QGIRVQRVACGYAHTLVLTDEGQIYAWGANS 285
Query: 280 -G-LGLCPNASLTRNEAGDAI-SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
G LG T N++ + +P+++ K + AC +AHT G +
Sbjct: 286 YGQLG-------TGNKSNQSYPTPVVVE-------KDRIIEIAACHSAHTSAAKTQGGHV 331
Query: 337 WSWG--RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTG-GLDDEIKT 386
+ WG RG+S +L T FA V W L+ E D L L E
Sbjct: 332 YMWGQCRGQSVILPHHTHFCCTDDVFACFATPAVTWRLLSVE-PDDHLTVAESLKREFDN 390
Query: 387 KD 388
D
Sbjct: 391 PD 392
Score = 106 (42.4 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 41/139 (29%), Positives = 64/139 (46%)
Query: 63 DSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPS 119
DS T K I S +G + LA + G ++ WG+ L + +T G LV +
Sbjct: 93 DSLTGKK--IASLSYGSGPHIVLATTD-GEVFTWGHNAYSQLGNGTTNHG--LVPCHIST 147
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
+ V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+
Sbjct: 148 ---NLSNKQVIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPR 196
Query: 180 IIETFNQDSPWAVYEVTCG 198
+ Q+ V + CG
Sbjct: 197 RVTGCLQNK--VVMNIACG 213
>MGI|MGI:2444156 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2444156
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005886 GO:GO:0005737
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 CTD:91433 HOGENOM:HOG000154085 HOVERGEN:HBG061852
OMA:ERPGAWF OrthoDB:EOG41NTMF EMBL:AK030872 EMBL:AK084219
EMBL:AK088662 EMBL:BC069844 IPI:IPI00881984 IPI:IPI00896067
RefSeq:NP_775621.2 UniGene:Mm.474502 ProteinModelPortal:Q8BTU7
SMR:Q8BTU7 PhosphoSite:Q8BTU7 PRIDE:Q8BTU7
Ensembl:ENSMUST00000047362 Ensembl:ENSMUST00000121882 GeneID:269955
KEGG:mmu:269955 UCSC:uc009ial.2 GeneTree:ENSGT00700000104312
InParanoid:Q8BTU7 NextBio:393123 Bgee:Q8BTU7 Genevestigator:Q8BTU7
Uniprot:Q8BTU7
Length = 377
Score = 125 (49.1 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ +S GD++ WG E
Sbjct: 183 FSWGAGRHGQLGHGTLEAELEPRLLEAL-QGLRMAKVAAGGWHSVCLSETGDIYIWGWNE 241
Query: 279 KGLGLCPNASLTRNEA 294
G P S T N+A
Sbjct: 242 SGQLALPTRSGTENKA 257
Score = 111 (44.1 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 39/122 (31%), Positives = 60/122 (49%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++ G+EHV+ L +AG+ + SWGA +GQLG G E+ L P+++E Q
Sbjct: 163 VRQLELGAEHVLLLCAAGQVF--------SWGAGRHGQLGHGTLEAELEPRLLEAL-QGL 213
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---TQSALVPEQVK 245
A +V G +H+ L+ D+ W G E+GQL T T++ E+
Sbjct: 214 RMA--KVAAGGWHSVCLSET---GDIY---IW--GWNESGQLALPTRSGTENKAEREEAT 263
Query: 246 EL 247
EL
Sbjct: 264 EL 265
Score = 87 (35.7 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P D V +CG+ HT +VT G +L++WG G+ G LG + P V
Sbjct: 298 PLGSDAVMASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHKDSTSLDRPCCV 347
Score = 77 (32.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 32/122 (26%), Positives = 50/122 (40%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP +++ ++ G L + AG ++ WG G +L + P + G
Sbjct: 158 APELRVRQLELGAEHVLLLCAAGQVFSWG---AGRHGQLGHGTLEAELEPRLLEALQGLR 214
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFN 185
+ KVA G H V L G+ Y WG N +GQL L R E++ + N
Sbjct: 215 MAKVAAGGWHSVCLSETGDIY--------IWGWNESGQLALPTRSGTENKAEREEATELN 266
Query: 186 QD 187
+D
Sbjct: 267 ED 268
Score = 72 (30.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 291
+LP V CG HT+VV+ G++++WG K G LG + SL R
Sbjct: 296 DLPLGSDAVMASCGSRHTAVVTRTGELYTWGWGKYGQLGHKDSTSLDR 343
>ZFIN|ZDB-GENE-070912-423 [details] [associations]
symbol:rpgra "retinitis pigmentosa GTPase regulator
a" species:7955 "Danio rerio" [GO:0072001 "renal system
development" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-070912-423 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0072001 GeneTree:ENSGT00700000104160 EMBL:BX571713
IPI:IPI00955233 RefSeq:XP_003199276.1 Ensembl:ENSDART00000079095
GeneID:571327 KEGG:dre:571327 CTD:571327 NextBio:20890513
Bgee:F1QV77 Uniprot:F1QV77
Length = 1698
Score = 176 (67.0 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 65/214 (30%), Positives = 104/214 (48%)
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
T +GE L G N++GQLGLG + + + F +P + ++ G +A LT
Sbjct: 102 TSQGEILAA---GGNSDGQLGLGHCNDSISFQRLRPFCDYAP--IKLLSAGDHTSAALTE 156
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
R W G GQLG G AL+P+++ + Q ++ VS CG H+++V+
Sbjct: 157 DGR------LFLW--GDNSAGQLGFGNDSHALLPKELN-MGQSIHWVS--CGYRHSALVT 205
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
+GDV+S+G E G L+ ++ + P + +QVACG HT+
Sbjct: 206 DSGDVYSFG-ESADG---RLGLSAHQLANHSYPQRVES-------LHSVLQVACGGKHTL 254
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T+D +L+ +G G G LG G T+ F A + V
Sbjct: 255 ALTED--ELYCFGGGEFGQLGLG-TLVFVADSPV 285
Score = 97 (39.2 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 43/135 (31%), Positives = 67/135 (49%)
Query: 220 WTFGLGENGQLGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++FG +G+LG Q A P++V+ L ++ V CG HT ++ +++ +G
Sbjct: 211 YSFGESADGRLGLSAHQLANHSYPQRVESLHS---VLQVACGGKHTLALTE-DELYCFGG 266
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E G LGL +L D SP+ + H K + V CG H+ L+TD G
Sbjct: 267 GEFGQLGL---GTLVF--VAD--SPVAVG----HFRKGR-VTHVTCGEQHSALITDSGL- 313
Query: 336 LWSWGRGRSGVLGTG 350
L+++G GR G LG G
Sbjct: 314 LYTFGDGRHGKLGHG 328
Score = 85 (35.0 bits), Expect = 6.0e-05, Sum P(3) = 6.0e-05
Identities = 39/143 (27%), Positives = 64/143 (44%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGH 127
K+ I + + G S + G L+++G+ ++ + G + T P V G
Sbjct: 32 KSDIPV-HISCGQSHSAFVTEQGRLFVFGD----NNRGQLGLQIKGPVTKPVCVKVLKGE 86
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VACG++H LVS T +GE L G N++GQLGLG + + + F
Sbjct: 87 RAQSVACGTDHT--LVS---TSQGEILAA---GGNSDGQLGLGHCNDSISFQRLRPFCDY 138
Query: 188 SPWAVYEVTCGSFHTALLTHRKR 210
+P + ++ G +A LT R
Sbjct: 139 AP--IKLLSAGDHTSAALTEDGR 159
Score = 49 (22.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 15/42 (35%), Positives = 24/42 (57%)
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKL 408
T+E +++E N + +E ++D EG E EK +EE KL
Sbjct: 1293 TKEEEEEE-NNEEMKEENSSED-EGEESVREKEEQEVEEEKL 1332
Score = 46 (21.3 bits), Expect = 5.4e-09, Sum P(2) = 5.4e-09
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 369 EFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMK 407
E +Q+E G D+E + ++ E + ++E+ EEMK
Sbjct: 1269 EGEQEESEVGNEDEENQEEEEEN-QTKEEEEEENNEEMK 1306
Score = 42 (19.8 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 371 KQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQS 411
++ E GG ++E + + + +EE ++ S EE + Q+
Sbjct: 1408 RETEEEEGGEEEEEEAEQKDTSEEEEQAEESEEEEEETEQN 1448
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 11/38 (28%), Positives = 20/38 (52%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEE 405
EE K++ + ++ ++ K+ + EE EKLS E
Sbjct: 1303 EEMKEENSSEDEGEESVREKEEQEVEE--EKLSEEGSE 1338
Score = 40 (19.1 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 23/80 (28%), Positives = 34/80 (42%)
Query: 348 GTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMK 407
GT K I+ AP L++E + T DD + +E +E +SA E
Sbjct: 474 GTPKHINTDAPVDTSITVLSKEPSFTPI-TKSPDD---CQCVETSENSLSDKNSAGREEN 529
Query: 408 LLQSKLSVMERYASILHGSI 427
+ Q L + AS+ H SI
Sbjct: 530 VFQQALPTELQVASVSHPSI 549
Score = 39 (18.8 bits), Expect = 2.8e-08, Sum P(2) = 2.8e-08
Identities = 17/59 (28%), Positives = 26/59 (44%)
Query: 368 EEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGS 426
E +DE + ++DE KT D E E +E E + ++ S E S +GS
Sbjct: 1202 ERESEDEDSERQIEDEEKT-DAEEGESSNEGEPERSESEDVSKNDRSDEEEGESEENGS 1259
Score = 37 (18.1 bits), Expect = 4.5e-08, Sum P(2) = 4.5e-08
Identities = 7/26 (26%), Positives = 17/26 (65%)
Query: 372 QDELNTGGLDDEIKTKDLEGAEERDE 397
+ E + GG D +++++E +E ++E
Sbjct: 1163 EGEKSKGGSGDMAESEEVEESEGQEE 1188
>MGI|MGI:1890646 [details] [associations]
symbol:Nek8 "NIMA (never in mitosis gene a)-related
expressed kinase 8" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0006468 "protein
phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0042995 "cell projection" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0072372 "primary
cilium" evidence=IDA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 MGI:MGI:1890646 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 GO:GO:0005737 GO:GO:0005856 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 HOGENOM:HOG000006908
HOVERGEN:HBG098799 OMA:EREVFAW OrthoDB:EOG4PZJ65 EMBL:AF407579
EMBL:AK154358 EMBL:BC070457 IPI:IPI00135930 RefSeq:NP_543125.1
UniGene:Mm.23788 ProteinModelPortal:Q91ZR4 SMR:Q91ZR4 IntAct:Q91ZR4
MINT:MINT-1341145 STRING:Q91ZR4 PhosphoSite:Q91ZR4 PRIDE:Q91ZR4
Ensembl:ENSMUST00000017549 GeneID:140859 KEGG:mmu:140859
InParanoid:Q91ZR4 NextBio:370021 Bgee:Q91ZR4 Genevestigator:Q91ZR4
GermOnline:ENSMUSG00000017405 Uniprot:Q91ZR4
Length = 698
Score = 170 (64.9 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 79/288 (27%), Positives = 120/288 (41%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSP--VWDF----H 125
++ V AG + +G L +W PL GG L + P P V F
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPL---GAGGGTLLPGAVELPQPQFVSRFLEGQS 395
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T+ VACG L G + ++G+ +NG LG G+ +P I+E
Sbjct: 396 GVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGNLTDISQPTIVEAL- 446
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ + +V CG+ H L+ D E W G G+ G+LG GT +S P+QV
Sbjct: 447 --LGYEMVQVACGASHVLALS-----TDG-ELFAW--GRGDGGRLGLGTRESHNCPQQVP 496
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAG-DAISPIL 302
P V CG+ + +++S G V + G + LGL + SL + L
Sbjct: 497 VAPGQE-AQRVVCGIDSSMILTSPGRVLACGSNRFNKLGL-DHLSLDEEPVPYQQVEEAL 554
Query: 303 ISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
P Q+P+ V G AH+ +T G +++G + G LGT
Sbjct: 555 SFTPLGSAPLDQEPLLCVDLGTAHSAAITASG-DCYTFGSNQHGQLGT 601
Score = 154 (59.3 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 69/239 (28%), Positives = 106/239 (44%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
D T+V+ G E V A D ++WG + G+LGLG RES P+ +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSTDGELFAWGRGDGGRLGLGTRESHNCPQQV 495
Query: 182 ETF-NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
Q++ V CG + +LT P +L C + + G L H + V
Sbjct: 496 PVAPGQEAQ----RVVCGIDSSMILTS---PGRVLA--CGSNRFNKLG-LDHLSLDEEPV 545
Query: 241 P-EQVKELPQYVYLVS----------VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
P +QV+E + L S VD G H++ ++++GD +++G + G +S
Sbjct: 546 PYQQVEEALSFTPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQH-GQLGTSSR 604
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ A P + G G K V VACG A TV V +G +++SWG+G G LG
Sbjct: 605 RVSRA-----PCRVQGL--EGIKM---VMVACGDAFTVAVGAEG-EVYSWGKGTRGRLG 652
Score = 137 (53.3 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 67/246 (27%), Positives = 104/246 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V G LA+ G L+ WG D G + S P V G +V
Sbjct: 450 EMVQVACGASHVLALSTDGELFAWGR---GDGGRLGLGTRESHNCPQQVPVAPGQEAQRV 506
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG----DRESRLRPKIIETFN--- 185
CG + + L S G L C G+N +LGL D E ++ E +
Sbjct: 507 VCGIDSSMILTSPGRV-----LAC---GSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTP 558
Query: 186 -QDSPWAVYEVTC---GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+P + C G+ H+A +T D C+TFG ++GQLG + + + P
Sbjct: 559 LGSAPLDQEPLLCVDLGTAHSAAIT---ASGD-----CYTFGSNQHGQLGTSSRRVSRAP 610
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP-NASLTRNEAGDAI 298
+V+ L + + +V V CG T V + G+V+SWG +G LG +A L R D
Sbjct: 611 CRVQGL-EGIKMVMVACGDAFTVAVGAEGEVYSWGKGTRGRLGRRDEDAGLPRPVQLDET 669
Query: 299 SPILIS 304
P +++
Sbjct: 670 HPYMVT 675
Score = 136 (52.9 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 52/211 (24%), Positives = 95/211 (45%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ + G +L P+ V G+ +V+
Sbjct: 397 VTIKHVACGDLFTACLTDRGIIMTFGS---GSNGCLGHGNLTDISQPTIVEALLGYEMVQ 453
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF-NQDSPW 190
VACG+ HV+AL + GE + +WG + G+LGLG RES P+ + Q++
Sbjct: 454 VACGASHVLALSTDGELF--------AWGRGDGGRLGLGTRESHNCPQQVPVAPGQEAQ- 504
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG----ENGQLGHGTTQSALVPEQVKE 246
V CG + +LT R + GL + + + + AL +
Sbjct: 505 ---RVVCGIDSSMILTSPGRVLACGSNRFNKLGLDHLSLDEEPVPYQQVEEALSFTPLGS 561
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
P L+ VD G H++ ++++GD +++G
Sbjct: 562 APLDQEPLLCVDLGTAHSAAITASGDCYTFG 592
>UNIPROTKB|J9NWD8 [details] [associations]
symbol:HERC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR017986 InterPro:IPR000569
InterPro:IPR001680 InterPro:IPR003877 InterPro:IPR015943
Pfam:PF00400 Pfam:PF00622 PROSITE:PS50082 PROSITE:PS50237
PROSITE:PS50294 SMART:SM00119 SMART:SM00320 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016567 GO:GO:0005622 InterPro:IPR008985
SUPFAM:SSF49899 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 InterPro:IPR001870 InterPro:IPR018355 SMART:SM00449
PROSITE:PS50188 SUPFAM:SSF56204 GeneTree:ENSGT00700000104312
EMBL:AAEX03016202 Ensembl:ENSCAFT00000042764 Uniprot:J9NWD8
Length = 4118
Score = 193 (73.0 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 52/151 (34%), Positives = 82/151 (54%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 3339 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 3390
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 3391 EE---VVQMSCGFKHSAVVTS--------DGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 3439
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 276
L Y + V CGL HT VS+ G VW++G
Sbjct: 3440 LEGY-QIGQVACGLNHTLAVSADGSMVWAFG 3469
Score = 172 (65.6 bits), Expect = 5.0e-07, Sum P(2) = 5.0e-07
Identities = 57/205 (27%), Positives = 97/205 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+++G + G+LGLG+ ++ P+ + + + +V CG HT ++ D
Sbjct: 3413 FTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTLAVSA-----D--G 3462
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
SM W FG G+ G+LG G + + P++V L + + V CG + ++ G V+++G
Sbjct: 3463 SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFSVALTKDGHVYTFG 3521
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
++ +GL P RN P+L G +D VA GA HT+ + G +
Sbjct: 3522 QDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGAEHTLALASTG-DV 3569
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G LG G T P +V
Sbjct: 3570 YAWGSNSEGQLGLGHTNHVREPTLV 3594
Score = 150 (57.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 44/135 (32%), Positives = 71/135 (52%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G+ G+LGHG + P Q++ L Q +V + CG H++VV+S G ++++G +
Sbjct: 3361 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVVQMSCGFKHSAVVTSDGKLFTFGNGD 3419
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL ++ E A+ I QVACG HT+ V+ DG +W
Sbjct: 3420 YGRLGLGNTSNKKLPERVTALEGYQIG-------------QVACGLNHTLAVSADGSMVW 3466
Query: 338 SWGRGRSGVLGTGKT 352
++G G G LG G +
Sbjct: 3467 AFGDGDYGKLGLGNS 3481
Score = 39 (18.8 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 33 GQLGFSGSNSLVPCVIEQF 51
GQL +G N +VP F
Sbjct: 3265 GQLAEAGRNVMVPAAAPSF 3283
>ZFIN|ZDB-GENE-080929-1 [details] [associations]
symbol:als2b "amyotrophic lateral sclerosis 2b
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005089 "Rho guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005543 "phospholipid
binding" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-080929-1 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 KO:K04575 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 EMBL:CU570787 EMBL:BX927225
EMBL:CU915284 IPI:IPI01024580 RefSeq:XP_002662342.2
UniGene:Dr.158633 Ensembl:ENSDART00000149896 GeneID:100318899
KEGG:dre:100318899 CTD:100318899 Uniprot:F8W4K3
Length = 1681
Score = 123 (48.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 35/115 (30%), Positives = 58/115 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG +GQLG GD RL+P +++ N V +V G+ H+ LT +
Sbjct: 552 WSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKE---VLKVAAGAHHSLALT--------AQ 600
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
S +++G +GQLGH +S Q+ +L + + + GL HT +++ GD
Sbjct: 601 SQVFSWGCNTSGQLGH--MESPTTFPQLTKLSDGIRVWDIGAGLQHTLLLAD-GD 652
Score = 114 (45.2 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 38/120 (31%), Positives = 55/120 (45%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L++ W++G G++GQLGHG L P+ VK L L V G H+ +++ V+S
Sbjct: 547 LQTEVWSWGQGQDGQLGHGDLLPRLQPDCVKSLNGKEVL-KVAAGAHHSLALTAQSQVFS 605
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV---ACGAAHTVLVTD 331
WG C N S + G SP P K D ++V G HT+L+ D
Sbjct: 606 WG-------C-NTS---GQLGHMESPTTF----PQLTKLSDGIRVWDIGAGLQHTLLLAD 650
Score = 104 (41.7 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 37/115 (32%), Positives = 52/115 (45%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLED-DSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG + G N C + I P + DS+ +KI V G +LA+
Sbjct: 104 DGGVHMWGENVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTVKILEVACGDQHTLALSAK 163
Query: 91 GALWMWGN-CPLP-DSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+W WG+ C L ++ST F + + P V G V++VACGS H VALV
Sbjct: 164 HEVWAWGSGCQLGLNTST---FPV---WKPQKVDHLSGRHVLQVACGSAHSVALV 212
Score = 90 (36.7 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 39/139 (28%), Positives = 62/139 (44%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG---HTV 129
++ V AG S + G + MWG + G S++ + TP V D TV
Sbjct: 87 RVVFVAAGSAHSGVVTEDGGVHMWGE-NVHGQCGLLGLSVIPNPTPVGVLDSEATPPQTV 145
Query: 130 --VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 186
++VACG +H +AL + E + +WG+ QLGL + +P+ ++
Sbjct: 146 KILEVACGDQHTLALSAKHEVW--------AWGSGC--QLGLNTSTFPVWKPQKVDHL-- 193
Query: 187 DSPWAVYEVTCGSFHTALL 205
S V +V CGS H+ L
Sbjct: 194 -SGRHVLQVACGSAHSVAL 211
Score = 73 (30.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+VWSWG + G + L D + + NG ++ ++VA GA H++ +T
Sbjct: 550 EVWSWGQGQD-GQLGHGDLLPRLQPDCVKSL----NG------KEVLKVAAGAHHSLALT 598
Query: 331 DDGYKLWSWGRGRSGVLG 348
+++SWG SG LG
Sbjct: 599 AQS-QVFSWGCNTSGQLG 615
>RGD|1308467 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1) and
BTB (POZ) domain containing protein 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 RGD:1308467 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:CH474049
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
OrthoDB:EOG4MSCXX IPI:IPI00364409 RefSeq:NP_001101850.1
UniGene:Rn.229110 Ensembl:ENSRNOT00000037800 GeneID:361050
KEGG:rno:361050 UCSC:RGD:1308467 NextBio:675026 Uniprot:D4AD40
Length = 531
Score = 168 (64.2 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 63/223 (28%), Positives = 100/223 (44%)
Query: 143 VSAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+SA E Y + + +G N + LG GD +S L PK +E CG
Sbjct: 29 ISASEAIYVTDSDEVFVFGLNYSNCLGTGDNQSTLVPKKLEAL------------CGK-R 75
Query: 202 TALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
L++ P+ +L + + G NG QLG+GTT + P QV +V V C
Sbjct: 76 IKSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLVKQVVEVAC 135
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
G H+ +++ G++++WG G + S T N+ +P ++ N H K V
Sbjct: 136 GSHHSMALAADGELFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLHTKKV---VN 185
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ACG ++ V D G +++ WG +G LG G + P V
Sbjct: 186 IACGQTSSMAVLDSG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G GQ+G G+T + P +V +V++ CG + V +G+V+ W
Sbjct: 148 ELFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGEVYGW 205
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L G+ ++P+ ++ HG Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HGVCVN---QIVCGYAHTLALTDEGL- 253
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVL 362
L++WG G LGTG + +P ++
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIM 280
Score = 153 (58.9 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHGV---CVNQIVCGYAHTLALTD--------E 251
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ + +G GQLG G+ + L P Q+ + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMW 310
Query: 276 GMEKG 280
G +G
Sbjct: 311 GQCRG 315
>ZFIN|ZDB-GENE-090313-139 [details] [associations]
symbol:herc3 "hect domain and RLD 3" species:7955
"Danio rerio" [GO:0006464 "cellular protein modification process"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-090313-139
GO:GO:0016567 GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 CTD:8916 HOGENOM:HOG000208452
HOVERGEN:HBG050878 OMA:SPAVDFR OrthoDB:EOG4RBQHS EMBL:CU467858
IPI:IPI00901161 RefSeq:NP_001139096.1 UniGene:Dr.86009
Ensembl:ENSDART00000112994 Ensembl:ENSDART00000141977
GeneID:100003587 NextBio:20785898 Uniprot:B8JLD4
Length = 1046
Score = 170 (64.9 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 51/153 (33%), Positives = 72/153 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ GQLGL D + R P I+ VY ++CG HTA LT E
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK--VVY-ISCGEEHTAALTK--------E 260
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH +T++ +P +V EL + + CG HT + V S G ++++
Sbjct: 261 GGLFTFGNGSKGQLGHDSTRNEPLPRRVMEL-MGTEVSQIACGRNHTLAFVPSTGLIYAF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
G L G A SP+ +S P
Sbjct: 320 GCNT------QGQLGTGIRGSAKSPVPVSNIQP 346
Score = 151 (58.2 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 56/204 (27%), Positives = 93/204 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+ G+N+ GQLG D+ RP+++ + + V+CG H+ + N+ +
Sbjct: 56 YTCGSNSCGQLG-HDKGGS-RPELVGALDAQK---ISGVSCGQAHSLAV------NEQGQ 104
Query: 217 SMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
W G G+ GQLG GT + A+ VP +K+L ++ + V CG H +S G ++ W
Sbjct: 105 VFAW--GAGDGGQLGLGTAEEAVRVPRLIKKLCEH-RISQVMCGNHHCIALSKDGQLFVW 161
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGY 334
G E G L + E +SP P P+ Q++ G H+ ++ G
Sbjct: 162 G-ENSSG---QLGLGKGEPS-TLSP------QPLKSLCGIPLTQISAGGDHSFALSFSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAP 358
++ WG+ +G LG D P
Sbjct: 210 AVFGWGKNSAGQLGLNDEQDRAVP 233
Score = 132 (51.5 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 43/133 (32%), Positives = 62/133 (46%)
Query: 154 LVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
++C WG++ GQLG+G E+ + P+ F+ + EV CG+ H+ L H
Sbjct: 2 MLC--WGSSGAGQLGIGASEASVFEPRSCCVFDGRG---LKEVACGNQHSLFLLH----- 51
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ +T G GQLGH S PE V L + V CG H+ V+ G V
Sbjct: 52 ---DGSVYTCGSNSCGQLGHDKGGSR--PELVGALDAQK-ISGVSCGQAHSLAVNEQGQV 105
Query: 273 WSWGMEKG--LGL 283
++WG G LGL
Sbjct: 106 FAWGAGDGGQLGL 118
Score = 117 (46.2 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 35/113 (30%), Positives = 54/113 (47%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 131
KI V G SLA++ G ++ WG D G G + + P + H + +
Sbjct: 85 KISGVSCGQAHSLAVNEQGQVFAWG---AGDGGQLGLGTAEEAVRVPRLIKKLCEHRISQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIET 183
V CG+ H +AL G+ + WG N++GQLGLG E S L P+ +++
Sbjct: 142 VMCGNHHCIALSKDGQLFV--------WGENSSGQLGLGKGEPSTLSPQPLKS 186
Score = 115 (45.5 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 42/134 (31%), Positives = 60/134 (44%)
Query: 222 FGLGEN--GQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
F GEN GQLG G + S L P+ +K L + L + G H+ +S +G V+ WG
Sbjct: 159 FVWGENSSGQLGLGKGEPSTLSPQPLKSLCG-IPLTQISAGGDHSFALSFSGAVFGWGKN 217
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
L N+ D P I + Q V ++CG HT +T +G L++
Sbjct: 218 SA------GQLGLNDEQDRAVPCHIKFL-----RSQKVVYISCGEEHTAALTKEG-GLFT 265
Query: 339 WGRGRSGVLGTGKT 352
+G G G LG T
Sbjct: 266 FGNGSKGQLGHDST 279
Score = 105 (42.0 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 42/133 (31%), Positives = 61/133 (45%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
FG G+N GQLG Q VP +K L +V + CG HT+ ++ G ++++G
Sbjct: 212 FGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK-VVYISCGEEHTAALTKEGGLFTFGNGS 270
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
KG LG TRNE P+ G + Q+ACG HT+ ++
Sbjct: 271 KGQLG----HDSTRNE------PLPRRVMELMGTEVS---QIACGRNHTLAFVPSTGLIY 317
Query: 338 SWGRGRSGVLGTG 350
++G G LGTG
Sbjct: 318 AFGCNTQGQLGTG 330
Score = 102 (41.0 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 35/131 (26%), Positives = 60/131 (45%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V G SL + + G+++ G+ +S + G S P V + V+CG
Sbjct: 39 VACGNQHSLFLLHDGSVYTCGS----NSCGQLGHDKGGS-RPELVGALDAQKISGVSCGQ 93
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEV 195
H +A+ G+ + +WGA + GQLGLG E +R P++I+ + + +V
Sbjct: 94 AHSLAVNEQGQVF--------AWGAGDGGQLGLGTAEEAVRVPRLIKKLCEHR---ISQV 142
Query: 196 TCGSFHTALLT 206
CG+ H L+
Sbjct: 143 MCGNHHCIALS 153
Score = 91 (37.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 29/94 (30%), Positives = 45/94 (47%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G S S F P F G + +VACG++H + L+ G Y C G+N+ GQLG
Sbjct: 16 GASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVY-----TC---GSNSCGQLG 67
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
D+ RP+++ + + V+CG H+
Sbjct: 68 -HDKGGS-RPELVGALDAQK---ISGVSCGQAHS 96
>MGI|MGI:1918580 [details] [associations]
symbol:Rcbtb1 "regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1" species:10090 "Mus
musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 MGI:MGI:1918580
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104208 CTD:55213 HOGENOM:HOG000065752
HOVERGEN:HBG053261 KO:K11494 OrthoDB:EOG4MSCXX EMBL:AK033501
EMBL:AK088299 EMBL:BC067005 IPI:IPI00469440 RefSeq:NP_082040.2
UniGene:Mm.234195 ProteinModelPortal:Q6NXM2 SMR:Q6NXM2
IntAct:Q6NXM2 STRING:Q6NXM2 PhosphoSite:Q6NXM2 PaxDb:Q6NXM2
PRIDE:Q6NXM2 Ensembl:ENSMUST00000022551 Ensembl:ENSMUST00000043227
GeneID:71330 KEGG:mmu:71330 UCSC:uc007ueb.2 InParanoid:Q6NXM2
NextBio:333557 Bgee:Q6NXM2 Genevestigator:Q6NXM2
GermOnline:ENSMUSG00000035469 Uniprot:Q6NXM2
Length = 531
Score = 167 (63.8 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 43/147 (29%), Positives = 70/147 (47%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G GQ+G G+T + P +V +V++ CG + V +G+V+ W
Sbjct: 148 ELFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGW 205
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L G+ ++P+ ++ HG Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HGMCVN---QIVCGYAHTLALTDEGL- 253
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVL 362
L++WG G LGTG + +P ++
Sbjct: 254 LYAWGANTYGQLGTGSKNNLLSPTQIM 280
Score = 164 (62.8 bits), Expect = 8.0e-09, P = 8.0e-09
Identities = 59/219 (26%), Positives = 99/219 (45%)
Query: 144 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
SA E Y ++ + +G N + LG GD +S L PK +E + ++ GS
Sbjct: 30 SANEAIYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEALCGKK---IKSLSYGSGPH 86
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
LLT + + + +G QLG+GTT + P QV ++ V CG H
Sbjct: 87 VLLTTE-------DGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVIEVACGSHH 139
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+ +++ G++++WG G + S T N+ +P ++ N H + V +ACG
Sbjct: 140 SMALAADGELFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLHTKRV---VNIACG 189
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V D G +++ WG +G LG G + P V
Sbjct: 190 QTSSMAVLDSG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 155 (59.6 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 40/125 (32%), Positives = 59/125 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHG---MCVNQIVCGYAHTLALTD--------E 251
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ + +G GQLG G+ + L P Q+ + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGSKNNLLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMW 310
Query: 276 GMEKG 280
G +G
Sbjct: 311 GQCRG 315
>UNIPROTKB|G3V2I3 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AC068831 HGNC:HGNC:30457
ProteinModelPortal:G3V2I3 SMR:G3V2I3 Ensembl:ENST00000555155
ArrayExpress:G3V2I3 Bgee:G3V2I3 Uniprot:G3V2I3
Length = 374
Score = 119 (46.9 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 180 FSWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMAEVAAGGWHSVCVSETGDIYIWGWNE 238
Query: 279 KGLGLCPNASLTRNEAGDAIS 299
G P +L E G+ ++
Sbjct: 239 SGQLALPTRNLA--EDGETVA 257
Score = 111 (44.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 29/77 (37%), Positives = 36/77 (46%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G VK +CGS H + GE Y +WG GQLG D S RP+ +E F
Sbjct: 297 GSDAVKASCGSRHTAVVTRTGELY--------TWGWGKYGQLGHEDTTSLDRPRRVEYF- 347
Query: 186 QDSPWAVYEVTCGSFHT 202
D V VTCG ++T
Sbjct: 348 VDKQLQVKAVTCGPWNT 364
Score = 98 (39.6 bits), Expect = 9.8e-07, Sum P(2) = 9.8e-07
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G+EH + L +AG+ + SWG +GQLG G E+ L P+++E Q A E
Sbjct: 166 GAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMA--E 214
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
V G +H+ ++ D+ W G E+GQL T A
Sbjct: 215 VAAGGWHSVCVSET---GDIY---IW--GWNESGQLALPTRNLA 250
Score = 90 (36.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P
Sbjct: 295 PMGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRP 341
Score = 73 (30.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 291
+LP V CG HT+VV+ G++++WG K G LG SL R
Sbjct: 293 DLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDR 340
Score = 51 (23.0 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG 97
+ V AGG S+ + G +++WG
Sbjct: 212 MAEVAAGGWHSVCVSETGDIYIWG 235
>UNIPROTKB|A6NED2 [details] [associations]
symbol:RCCD1 "RCC1 domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH471101 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 EMBL:AC068831
EMBL:BC113826 EMBL:BC140708 EMBL:BC140709 IPI:IPI00399158
RefSeq:NP_001017919.1 RefSeq:NP_291022.2 UniGene:Hs.655895
ProteinModelPortal:A6NED2 SMR:A6NED2 STRING:A6NED2
PhosphoSite:A6NED2 PaxDb:A6NED2 PRIDE:A6NED2
Ensembl:ENST00000394258 Ensembl:ENST00000556618 GeneID:91433
KEGG:hsa:91433 UCSC:uc002bqj.3 CTD:91433 GeneCards:GC15P091498
HGNC:HGNC:30457 HPA:HPA039683 HPA:HPA040776 neXtProt:NX_A6NED2
PharmGKB:PA142671092 eggNOG:NOG305770 HOGENOM:HOG000154085
HOVERGEN:HBG061852 InParanoid:A6NED2 OMA:ERPGAWF OrthoDB:EOG41NTMF
PhylomeDB:A6NED2 GenomeRNAi:91433 NextBio:77244 ArrayExpress:A6NED2
Bgee:A6NED2 CleanEx:HS_RCCD1 Genevestigator:A6NED2 Uniprot:A6NED2
Length = 376
Score = 119 (46.9 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 28/81 (34%), Positives = 46/81 (56%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 180 FSWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMAEVAAGGWHSVCVSETGDIYIWGWNE 238
Query: 279 KGLGLCPNASLTRNEAGDAIS 299
G P +L E G+ ++
Sbjct: 239 SGQLALPTRNLA--EDGETVA 257
Score = 98 (39.6 bits), Expect = 9.9e-07, Sum P(2) = 9.9e-07
Identities = 33/104 (31%), Positives = 49/104 (47%)
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G+EH + L +AG+ + SWG +GQLG G E+ L P+++E Q A E
Sbjct: 166 GAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMA--E 214
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
V G +H+ ++ D+ W G E+GQL T A
Sbjct: 215 VAAGGWHSVCVSET---GDIY---IW--GWNESGQLALPTRNLA 250
Score = 90 (36.7 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P
Sbjct: 297 PMGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRP 343
Score = 89 (36.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/73 (34%), Positives = 43/73 (58%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVY 252
+ +CGS HTA++T R ++ +T+G G+ GQLGH T S P +V+ + + +
Sbjct: 304 KASCGSRHTAVVT---RTGEL-----YTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQ 355
Query: 253 LVSVDCGLFHTSV 265
+ +V CG ++T V
Sbjct: 356 VKAVTCGPWNTYV 368
Score = 79 (32.9 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP ++ ++ G +L +D AG ++ WG G +L + P + G
Sbjct: 155 APELRARQLELGAEHALLLDAAGQVFSWGG---GRHGQLGHGTLEAELEPRLLEALQGLV 211
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ +VA G H V + G+ Y WG N +GQL L R
Sbjct: 212 MAEVAAGGWHSVCVSETGDIY--------IWGWNESGQLALPTR 247
Score = 73 (30.8 bits), Expect = 5.4e-05, Sum P(2) = 5.4e-05
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 291
+LP V CG HT+VV+ G++++WG K G LG SL R
Sbjct: 295 DLPMGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHEDTTSLDR 342
>UNIPROTKB|I3LCV3 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 OMA:NCSNCLG
EMBL:FP325140 Ensembl:ENSSSCT00000023143 Uniprot:I3LCV3
Length = 560
Score = 166 (63.5 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 44/147 (29%), Positives = 69/147 (46%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G GQ+G G+T + P +V +VS+ CG + V G+V+ W
Sbjct: 177 EVFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGEVYGW 234
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 235 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 282
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVL 362
L++WG G LGTG + +PA ++
Sbjct: 283 LYAWGANTYGQLGTGNKNNLLSPAHIM 309
Score = 165 (63.1 bits), Expect = 6.8e-09, P = 6.8e-09
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 144 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
SA E Y ++ + +G N + LG GD +S L PK +E CG
Sbjct: 59 SANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEAL------------CGK-KI 105
Query: 203 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
L++ P+ +L + + G NG QLG+GTT + P QV +V V CG
Sbjct: 106 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACG 165
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 166 SHHSMALAADGEVFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLH---IKRVVSI 215
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 216 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 256
Score = 149 (57.5 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 232 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 280
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 281 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMW 339
Query: 276 GMEKG 280
G +G
Sbjct: 340 GQCRG 344
Score = 121 (47.7 bits), Expect = 0.00045, P = 0.00045
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ S+ G S+A+ + G ++ WG + G + + TP V H V ++
Sbjct: 211 RVVSIACGQTSSMAVLDNGEVYGWG---YNGNGQLGLGNNGNQLTPVRVAALHSVCVNQI 267
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CG H +AL G + Y+WGAN GQLG G++ + L P I + V
Sbjct: 268 VCGYAHTLALTDEG--------LLYAWGANTYGQLGTGNKNNLLSPAHIMVEKE----RV 315
Query: 193 YEVT-CGSFHTA 203
E+ C S HT+
Sbjct: 316 VEIAACHSAHTS 327
Score = 106 (42.4 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 52/188 (27%), Positives = 79/188 (42%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 234 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 290
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 340
L + +SP I + + V++A C +AHT G ++ WG
Sbjct: 291 ----YGQLGTGNKNNLLSPAHIM------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 340
Query: 341 --RGRSGVLGT----GKTIDFFA----PAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
RG+S L T D FA PA+ W L+ E +D L + +K K+ +
Sbjct: 341 QCRGQSVTLPHLTHFSSTDDVFACFATPAVT-WRLLSVEH-EDFLTVA---ESLK-KEFD 394
Query: 391 GAEERDEK 398
E D K
Sbjct: 395 SPETADLK 402
Score = 104 (41.7 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 41/160 (25%), Positives = 68/160 (42%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 105 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 158
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ +
Sbjct: 159 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVTNCLHIK 210
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
V + CG + + + GLG NG
Sbjct: 211 --RVVSIACGQTSSMAVLDNGEVYGWGYNGNGQLGLGNNG 248
>MGI|MGI:1914388 [details] [associations]
symbol:Herc6 "hect domain and RLD 6" species:10090 "Mus
musculus" [GO:0004842 "ubiquitin-protein ligase activity"
evidence=ISO;IBA] [GO:0005622 "intracellular" evidence=IEA]
[GO:0005634 "nucleus" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=ISO;IBA] [GO:0006464 "cellular protein modification
process" evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0030332 "cyclin binding" evidence=ISO] [GO:0042787 "protein
ubiquitination involved in ubiquitin-dependent protein catabolic
process" evidence=IBA] [GO:0045087 "innate immune response"
evidence=IEA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 MGI:MGI:1914388 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005829 GO:GO:0005634 GO:GO:0005737 GO:GO:0045087
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
GO:GO:0042787 SUPFAM:SSF56204 GeneTree:ENSGT00660000095216
CTD:55008 OMA:HIFAGTY EMBL:AC127307 EMBL:AC142212 EMBL:AK017888
EMBL:AK149648 IPI:IPI00850197 RefSeq:NP_080268.1 UniGene:Mm.297393
ProteinModelPortal:F2Z461 SMR:F2Z461 PRIDE:F2Z461
Ensembl:ENSMUST00000031817 GeneID:67138 KEGG:mmu:67138
ChiTaRS:HERC6 NextBio:323692 Bgee:F2Z461 Uniprot:F2Z461
Length = 1003
Score = 169 (64.5 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 59/216 (27%), Positives = 106/216 (49%)
Query: 140 VALVSAGETYKGEDLVC-----YSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAVY 193
V LVS G+ + VC ++WGA + GQLG+G+ +E P I+ + +
Sbjct: 76 VDLVSCGKEHSVA--VCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKIKAL---AGIKII 130
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVKELPQYVY 252
+V+CG +H+ L+ + +++G GQLG G ++S +P++VK L + +
Sbjct: 131 QVSCGHYHSLALSE--------DGHVFSWGRNSEGQLGLGKNSRSQAIPQKVKSL-EGIP 181
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI-SPILISGNGPHGP 311
L V G H+ +S G + WG + L +L+ N+ + I P I
Sbjct: 182 LAQVAAGGTHSFALSLTGTSFGWGSNRSGQL----ALSGNKVKEQIYKPHSIGAL----- 232
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
K + ++CG HT ++T++G +++++G SG L
Sbjct: 233 KNLSVIYISCGYEHTAVLTEEG-QVFTFGGNSSGQL 267
Score = 158 (60.7 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 62/217 (28%), Positives = 92/217 (42%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD 123
+K A IKI V G SLA+ G ++ WG + G + S P V
Sbjct: 119 TKIKALAGIKIIQVSCGHYHSLALSEDGHVFSWGRNS--EGQLGLGKNSRSQAIPQKVKS 176
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-GDR--ESRLRPKI 180
G + +VA G H AL G ++ WG+N +GQL L G++ E +P
Sbjct: 177 LEGIPLAQVAAGGTHSFALSLTGTSF--------GWGSNRSGQLALSGNKVKEQIYKPHS 228
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
I S +Y ++CG HTA+LT E +TFG +GQL
Sbjct: 229 IGALKNLS--VIY-ISCGYEHTAVLTE--------EGQVFTFGGNSSGQLQPSPRSGQRG 277
Query: 241 PEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
P+ ++ + V ++C +HT + V + G V S G
Sbjct: 278 PQLIEGIGGRVS--QIECASYHTIAYVYTTGQVVSLG 312
Score = 152 (58.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 45/134 (33%), Positives = 67/134 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YS G N+ GQLG +S RP+ I+ N V V+CG H+ + H+ +
Sbjct: 44 YSCGDNSWGQLGQRRDQSTERPEPIQALND---LHVDLVSCGKEHSVAVCHKGKV----- 95
Query: 217 SMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
W G G GQLG G + + +P ++K L + ++ V CG +H+ +S G V+SW
Sbjct: 96 -FAW--GAGSEGQLGIGEFKEISFMPTKIKALAG-IKIIQVSCGHYHSLALSEDGHVFSW 151
Query: 276 GM--EKGLGLCPNA 287
G E LGL N+
Sbjct: 152 GRNSEGQLGLGKNS 165
Score = 149 (57.5 bits), Expect = 8.7e-07, P = 8.7e-07
Identities = 57/222 (25%), Positives = 98/222 (44%)
Query: 63 DSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
D T PI+ + V G S+A+ + G ++ WG G F +S F
Sbjct: 59 DQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG-AGSEGQLGIGEFKEIS-F 116
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESR 175
P+ + G +++V+CG H +AL ED +SWG N+ GQLGLG + S+
Sbjct: 117 MPTKIKALAGIKIIQVSCGHYHSLAL--------SEDGHVFSWGRNSEGQLGLGKNSRSQ 168
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL-GENGQLGHGT 234
P+ +++ + P A +V G H+ L+ S W G+ G+
Sbjct: 169 AIPQKVKSL-EGIPLA--QVAAGGTHSFALSLTGT------SFGWGSNRSGQLALSGNKV 219
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ P + L + ++ + CG HT+V++ G V+++G
Sbjct: 220 KEQIYKPHSIGALKN-LSVIYISCGYEHTAVLTEEGQVFTFG 260
Score = 138 (53.6 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 46/135 (34%), Positives = 67/135 (49%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQ-YVYLVSVDCGLFHTSVVSSAGDVWSWGM- 277
+ G+N GQLG QS PE ++ L +V LVS CG H+ V G V++WG
Sbjct: 44 YSCGDNSWGQLGQRRDQSTERPEPIQALNDLHVDLVS--CGKEHSVAVCHKGKVFAWGAG 101
Query: 278 -EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
E LG+ ++ P I G K +QV+CG H++ +++DG+ +
Sbjct: 102 SEGQLGIGEFKEIS-------FMPTKIKALA--GIKI---IQVSCGHYHSLALSEDGH-V 148
Query: 337 WSWGRGRSGVLGTGK 351
+SWGR G LG GK
Sbjct: 149 FSWGRNSEGQLGLGK 163
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 46/180 (25%), Positives = 71/180 (39%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPD-SLEDDSKTNHKAPIKICSVKAGGM 82
Y SL DG + G NS E L +G S K I + V AGG
Sbjct: 137 YHSLALSEDGHVFSWGRNS------EGQLGLGKNSRSQAIPQKVKSLEGIPLAQVAAGGT 190
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
S A+ G + WG+ + G + P + +V+ ++CG EH L
Sbjct: 191 HSFALSLTGTSFGWGSNRSGQLALSGNKVKEQIYKPHSIGALKNLSVIYISCGYEHTAVL 250
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ + ++G N++GQL R + P++IE V ++ C S+HT
Sbjct: 251 TEEGQVF--------TFGGNSSGQLQPSPRSGQRGPQLIEGIGG----RVSQIECASYHT 298
>RGD|1306897 [details] [associations]
symbol:Nek8 "NIMA-related kinase 8" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0072372
"primary cilium" evidence=IEA;ISO] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 RGD:1306897 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0072372
PRINTS:PR00633 PROSITE:PS50012 EMBL:CH473948 KO:K08857
GeneTree:ENSGT00700000104137 CTD:284086 OrthoDB:EOG4PZJ65
IPI:IPI00369945 RefSeq:NP_001099274.1 UniGene:Rn.144705
Ensembl:ENSRNOT00000017264 GeneID:287473 KEGG:rno:287473
NextBio:626264 Uniprot:D3ZGQ5
Length = 698
Score = 167 (63.8 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 79/290 (27%), Positives = 124/290 (42%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSP--VWDF----H 125
++ V AG + +G L +W PL T GG L + P P V F
Sbjct: 339 EVVQVAAGRTQKAGVTRSGRLILWEAPPL---GTGGGTLLPGAVELPQPQFVSRFLEGQS 395
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T+ VACG L G + ++G+ +NG LG G +P I+E
Sbjct: 396 GVTIKHVACGDLFTACLTDRG--------IIMTFGSGSNGCLGHGSLTDISQPTIVEAL- 446
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ + +V CG+ H L+ E W G G+ G+LG GT +S P+QV
Sbjct: 447 --LGYEMVQVACGASHVLALSADG------ELFAW--GRGDGGRLGLGTRESHNCPQQVP 496
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGL-CPNAS---LTRNEAGDAIS 299
+P V CG+ + +++S G V + G + LGL C + + + +A+S
Sbjct: 497 MVPGQE-AQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSLEEEPVPHQQVEEALS 555
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ G+ P + + V G AH+ VT G +++G + G LGT
Sbjct: 556 FTPL-GSAPLDR--ETLLCVDLGTAHSAAVTASG-ACYTFGSNQHGQLGT 601
Score = 145 (56.1 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 62/232 (26%), Positives = 99/232 (42%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
D T+V+ G E V A D ++WG + G+LGLG RES P+ +
Sbjct: 436 DISQPTIVEALLGYEMVQVACGASHVLALSADGELFAWGRGDGGRLGLGTRESHNCPQQV 495
Query: 182 ETF-NQDSPWAVYEVTCGSFHTA---LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
Q++ V + C T+ +L + L C + E + H +
Sbjct: 496 PMVPGQEAQRVVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSL---EEEPVPHQQVEE 552
Query: 238 ALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
AL + P L+ VD G H++ V+++G +++G + G +S + A
Sbjct: 553 ALSFTPLGSAPLDRETLLCVDLGTAHSAAVTASGACYTFGSNQH-GQLGTSSRRVSRA-- 609
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P + G G K V VACG A TV + +G +++SWG+G G LG
Sbjct: 610 ---PCRVQGL--EGIKM---VMVACGDAFTVAIGAEG-EVYSWGKGARGRLG 652
Score = 141 (54.7 bits), Expect = 4.0e-06, P = 4.0e-06
Identities = 53/210 (25%), Positives = 94/210 (44%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ + G SL P+ V G+ +V+
Sbjct: 397 VTIKHVACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLTDISQPTIVEALLGYEMVQ 453
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF-NQDSPW 190
VACG+ HV+AL + GE + +WG + G+LGLG RES P+ + Q++
Sbjct: 454 VACGASHVLALSADGELF--------AWGRGDGGRLGLGTRESHNCPQQVPMVPGQEAQR 505
Query: 191 AVYEVTCGSFHTA---LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V + C T+ +L + L C + E + H + AL +
Sbjct: 506 VVCGIDCSMILTSPGRVLACGSNRFNKLGLDCLSL---EEEPVPHQQVEEALSFTPLGSA 562
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
P L+ VD G H++ V+++G +++G
Sbjct: 563 PLDRETLLCVDLGTAHSAAVTASGACYTFG 592
Score = 128 (50.1 bits), Expect = 0.00010, P = 0.00010
Identities = 56/215 (26%), Positives = 90/215 (41%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V G LA+ G L+ WG D G + S P V G +V
Sbjct: 450 EMVQVACGASHVLALSADGELFAWGR---GDGGRLGLGTRESHNCPQQVPMVPGQEAQRV 506
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG----DRESRLRPKIIETFN--- 185
CG + + L S G L C G+N +LGL + E ++ E +
Sbjct: 507 VCGIDCSMILTSPGRV-----LAC---GSNRFNKLGLDCLSLEEEPVPHQQVEEALSFTP 558
Query: 186 -QDSPWAVYEVTC---GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+P + C G+ H+A +T C+TFG ++GQLG + + + P
Sbjct: 559 LGSAPLDRETLLCVDLGTAHSAAVT--------ASGACYTFGSNQHGQLGTSSRRVSRAP 610
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+V+ L + + +V V CG T + + G+V+SWG
Sbjct: 611 CRVQGL-EGIKMVMVACGDAFTVAIGAEGEVYSWG 644
>UNIPROTKB|O95199 [details] [associations]
symbol:RCBTB2 "RCC1 and BTB domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=TAS] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471075 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HOVERGEN:HBG053261 KO:K11494 EMBL:AF060219 EMBL:AY341245
EMBL:AK315703 EMBL:AL157813 EMBL:BC029052 IPI:IPI00658195
IPI:IPI00941277 PIR:T50663 RefSeq:NP_001259.1 UniGene:Hs.652712
ProteinModelPortal:O95199 SMR:O95199 IntAct:O95199
MINT:MINT-1481780 STRING:O95199 PhosphoSite:O95199 PRIDE:O95199
DNASU:1102 Ensembl:ENST00000344532 GeneID:1102 KEGG:hsa:1102
UCSC:uc001vch.3 CTD:1102 GeneCards:GC13M049063 HGNC:HGNC:1914
HPA:HPA040242 MIM:603524 neXtProt:NX_O95199 PharmGKB:PA26450
InParanoid:O95199 OrthoDB:EOG4M91R6 PhylomeDB:O95199 ChiTaRS:RCBTB2
GenomeRNAi:1102 NextBio:4558 ArrayExpress:O95199 Bgee:O95199
CleanEx:HS_RCBTB2 Genevestigator:O95199 GermOnline:ENSG00000136161
Uniprot:O95199
Length = 551
Score = 164 (62.8 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 59/193 (30%), Positives = 87/193 (45%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G N G LGLGD +S + P+ +++ N A G H L T E
Sbjct: 71 GTNCCGCLGLGDVQSTIEPRRLDSLN-GKKIACLSYGSGP-HIVLAT--------TEGEV 120
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G QLG+GTT LVP + ++ V CG +H+ V++S G+V++WG
Sbjct: 121 FTWGHNAYSQLGNGTTNHGLVPCHISTNLSNKQVIEVACGSYHSLVLTSDGEVFAWGYNN 180
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G + S T N+ PI G K V +ACG + V D G +++ W
Sbjct: 181 S-GQVGSGS-TVNQ------PIPRRVTGCLQNKVV--VTIACGQMCCMAVVDTG-EVYVW 229
Query: 340 GRGRSGVLGTGKT 352
G +G LG G +
Sbjct: 230 GYNGNGQLGLGNS 242
Score = 162 (62.1 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 43/135 (31%), Positives = 69/135 (51%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G +GQ+G G+T + +P +V Q +V++ CG V G+V+ W
Sbjct: 172 EVFAW--GYNNSGQVGSGSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVW 229
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L +G+ +P ++ G + Q +VACG AHT+++TD+G +
Sbjct: 230 GYN---G---NGQLGLGNSGNQPTPCRVAAL--QGIRVQ---RVACGYAHTLVLTDEG-Q 277
Query: 336 LWSWGRGRSGVLGTG 350
+++WG G LGTG
Sbjct: 278 VYAWGANSYGQLGTG 292
Score = 134 (52.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/136 (28%), Positives = 70/136 (51%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
F LG N G LG G QS + P ++ L + + +S G H + ++ G+V++WG
Sbjct: 68 FVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHN 126
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L + P IS N + + ++VACG+ H++++T DG ++++
Sbjct: 127 A------YSQLGNGTTNHGLVPCHISTNLSN----KQVIEVACGSYHSLVLTSDG-EVFA 175
Query: 339 WGRGRSGVLGTGKTID 354
WG SG +G+G T++
Sbjct: 176 WGYNNSGQVGSGSTVN 191
Score = 127 (49.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 38/125 (30%), Positives = 52/125 (41%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++ P + V V CG HT +LT E
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAALQGIR---VQRVACGYAHTLVLTD--------E 275
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ +G GQLG G + P V + ++ C HTS + G V+ W
Sbjct: 276 GQVYAWGANSYGQLGTGNKSNQSYPTPVTVEKDRIIEIAA-CHSTHTSAAKTQGGHVYMW 334
Query: 276 GMEKG 280
G +G
Sbjct: 335 GQCRG 339
Score = 127 (49.8 bits), Expect = 9.6e-05, P = 9.6e-05
Identities = 39/134 (29%), Positives = 64/134 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWGY------NGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDR-- 309
Query: 191 AVYEVT-CGSFHTA 203
+ E+ C S HT+
Sbjct: 310 -IIEIAACHSTHTS 322
Score = 107 (42.7 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 51/182 (28%), Positives = 75/182 (41%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +G NGQLG G + + P +V L Q + + V CG HT V++ G V++WG
Sbjct: 227 YVWGYNGNGQLGLGNSGNQPTPCRVAAL-QGIRVQRVACGYAHTLVLTDEGQVYAWGANS 285
Query: 280 -G-LGLCPNASLTRNEAGDAI-SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
G LG T N++ + +P+ + K + AC + HT G +
Sbjct: 286 YGQLG-------TGNKSNQSYPTPVTVE-------KDRIIEIAACHSTHTSAAKTQGGHV 331
Query: 337 WSWG--RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTG-GLDDEIKT 386
+ WG RG+S +L T FA V W L+ E D L L E
Sbjct: 332 YMWGQCRGQSVILPHLTHFSCTDDVFACFATPAVTWRLLSVE-PDDHLTVAESLKREFDN 390
Query: 387 KD 388
D
Sbjct: 391 PD 392
Score = 99 (39.9 bits), Expect = 3.5e-08, Sum P(2) = 3.5e-08
Identities = 40/139 (28%), Positives = 62/139 (44%)
Query: 63 DSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPS 119
DS K I S +G + LA G ++ WG+ L + +T G LV +
Sbjct: 93 DSLNGKK--IACLSYGSGPHIVLATTE-GEVFTWGHNAYSQLGNGTTNHG--LVPCHIST 147
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
+ V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+
Sbjct: 148 ---NLSNKQVIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPR 196
Query: 180 IIETFNQDSPWAVYEVTCG 198
+ Q+ V + CG
Sbjct: 197 RVTGCLQNK--VVVTIACG 213
>UNIPROTKB|F1PV11 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494 OMA:NCSNCLG
EMBL:AAEX03013105 RefSeq:XP_542558.2 Ensembl:ENSCAFT00000006979
GeneID:485440 KEGG:cfa:485440 Uniprot:F1PV11
Length = 531
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 144 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
SA E Y ++ + +G N + LG GD +S L PK +E CG
Sbjct: 30 SANEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEAL------------CGK-KI 76
Query: 203 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
L++ P+ +L + + G NG QLG+GTT + P QV +V V CG
Sbjct: 77 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLIKQVVEVACG 136
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 137 SHHSMALAADGEVFAWGYNN-CGQVGSGSTT-NQP----TPRKVT-NCLH---IKRVVGI 186
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 187 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G GQ+G G+T + P +V +V + CG + V G+V+ W
Sbjct: 148 EVFAW--GYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 253
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVL 362
L++WG G LGTG + +PA ++
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 251
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMW 310
Query: 276 GMEKG 280
G +G
Sbjct: 311 GQCRG 315
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 47/149 (31%), Positives = 67/149 (44%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API++C+ V G S+A+ G ++ WG NC G S + TP
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTTNQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLT 206
P + + V ++ CG HT LT
Sbjct: 224 PVRVAALHSV---CVNQIVCGYAHTLALT 249
Score = 107 (42.7 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 51/187 (27%), Positives = 77/187 (41%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 261
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 340
L + +SP I + + V++A C +AHT G ++ WG
Sbjct: 262 ----YGQLGTGNKNNLLSPAHIM------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 341 --RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 391
RG+S VL T FA V W L+ E +D L + +K K+ +
Sbjct: 312 QCRGQSVVLPHLTHFSCTDDVFACFATPAVSWRLLSVEH-EDFLTVA---ESLK-KEFDS 366
Query: 392 AEERDEK 398
E D K
Sbjct: 367 PETADLK 373
Score = 103 (41.3 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTTNQPTPR 172
>TAIR|locus:2090136 [details] [associations]
symbol:AT3G15430 "AT3G15430" species:3702 "Arabidopsis
thaliana" [GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0008536 "Ran GTPase binding"
evidence=ISS] [GO:0006486 "protein glycosylation" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002686 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB022218 EMBL:AC024081 HSSP:P18754
EMBL:AY150379 IPI:IPI00535822 RefSeq:NP_566512.1 RefSeq:NP_974323.1
UniGene:At.24353 ProteinModelPortal:Q9LDU3 SMR:Q9LDU3 IntAct:Q9LDU3
EnsemblPlants:AT3G15430.1 EnsemblPlants:AT3G15430.2 GeneID:820782
KEGG:ath:AT3G15430 TAIR:At3g15430 InParanoid:Q9LDU3 OMA:GDNERAQ
PhylomeDB:Q9LDU3 ProtClustDB:CLSN2688406 Genevestigator:Q9LDU3
Uniprot:Q9LDU3
Length = 488
Score = 162 (62.1 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 61/220 (27%), Positives = 96/220 (43%)
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHT 202
SA G+ L C G N++ G D + RPK++E + +P +V G T
Sbjct: 175 SAFVLQSGQVLTC---GDNSSHCCGHLDTSRPIFRPKLVEAL-KGTPCK--QVAAGLHFT 228
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
L+ E +T G +GQLGHG T VP+ V+ L +V + G +
Sbjct: 229 VFLSR--------EGHAYTCGSNTHGQLGHGDTLDRPVPKVVEFLKTIGPVVQIAAGPSY 280
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
V+ G V+S+G G C L E D + P +I G ++V+ G
Sbjct: 281 VLAVTQDGSVYSFG--SGSNFC----LGHGEQQDELQPRVIQAFKRKGIHI---LRVSAG 331
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
H V + +G ++++WG+G G LG G D P +++
Sbjct: 332 DEHAVALDSNG-RVYTWGKGYCGALGHGDENDKITPQVLV 370
Score = 135 (52.6 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/206 (26%), Positives = 87/206 (42%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH--GHTVVK 131
+ + AG LA+ G+++ +G+ + G P + F G +++
Sbjct: 271 VVQIAAGPSYVLAVTQDGSVYSFGS---GSNFCLGHGEQQDELQPRVIQAFKRKGIHILR 327
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+ G EH VAL S G Y +WG G LG GD ++ P+++ N + A
Sbjct: 328 VSAGDEHAVALDSNGRVY--------TWGKGYCGALGHGDENDKITPQVLVNLN--NCLA 377
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQY 250
V +V T +L +L W G G G G + L P ++ L P
Sbjct: 378 V-QVCARKRKTFVLVE----GGLLYGFGW-MGFGSLGFPDRGVSDKVLRPRVLECLKPHR 431
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWG 276
V VS GL+HT VV+ G ++ +G
Sbjct: 432 VSQVST--GLYHTIVVTQRGRIFGFG 455
Score = 82 (33.9 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 28/91 (30%), Positives = 37/91 (40%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F P V G +VA G V L G Y C G+N +GQLG GD R
Sbjct: 205 FRPKLVEALKGTPCKQVAAGLHFTVFLSREGHAY-----TC---GSNTHGQLGHGDTLDR 256
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
PK++E P V ++ G + +T
Sbjct: 257 PVPKVVEFLKTIGP--VVQIAAGPSYVLAVT 285
Score = 81 (33.6 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 36/131 (27%), Positives = 58/131 (44%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-ME 278
+T+G G G LGHG + P+ + L + V V T V+ G ++ +G M
Sbjct: 345 YTWGKGYCGALGHGDENDKITPQVLVNLNNCL-AVQVCARKRKTFVLVEGGLLYGFGWMG 403
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LG P+ R + + P ++ PH QV+ G HT++VT G +++
Sbjct: 404 FGSLGF-PD----RGVSDKVLRPRVLECLKPHRVS-----QVSTGLYHTIVVTQRG-RIF 452
Query: 338 SWGRGRSGVLG 348
+G LG
Sbjct: 453 GFGDNERAQLG 463
>UNIPROTKB|Q8NDN9 [details] [associations]
symbol:RCBTB1 "RCC1 and BTB domain-containing protein 1"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000210 InterPro:IPR013069
Pfam:PF00651 PROSITE:PS50097 SMART:SM00225 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0006355
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 GO:GO:0007049 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 EMBL:AL139321 EMBL:AF334406
EMBL:AJ319660 EMBL:AK096654 EMBL:AL833821 EMBL:BC038104
IPI:IPI00329626 IPI:IPI00973193 RefSeq:NP_060661.3
UniGene:Hs.508021 ProteinModelPortal:Q8NDN9 SMR:Q8NDN9
IntAct:Q8NDN9 MINT:MINT-4718485 STRING:Q8NDN9 PhosphoSite:Q8NDN9
DMDM:74751227 PRIDE:Q8NDN9 DNASU:55213 Ensembl:ENST00000258646
Ensembl:ENST00000378302 Ensembl:ENST00000546015 GeneID:55213
KEGG:hsa:55213 UCSC:uc001vde.1 CTD:55213 GeneCards:GC13M050106
HGNC:HGNC:18243 HPA:HPA045925 MIM:607867 neXtProt:NX_Q8NDN9
PharmGKB:PA134955699 HOGENOM:HOG000065752 HOVERGEN:HBG053261
InParanoid:Q8NDN9 KO:K11494 OMA:NCSNCLG OrthoDB:EOG4MSCXX
PhylomeDB:Q8NDN9 GenomeRNAi:55213 NextBio:59164 ArrayExpress:Q8NDN9
Bgee:Q8NDN9 CleanEx:HS_RCBTB1 Genevestigator:Q8NDN9
GermOnline:ENSG00000136144 Uniprot:Q8NDN9
Length = 531
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G GQ+G G+T + P +V +V + CG + V G+V+ W
Sbjct: 148 EVFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 253
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVL 362
L++WG G LGTG + +PA ++
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 63/222 (28%), Positives = 101/222 (45%)
Query: 144 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
SA E Y ++ + +G N + LG GD +S L PK +E CG
Sbjct: 30 SASEALYVTDNDEVFVFGLNYSNCLGTGDNQSTLVPKKLEGL------------CGK-KI 76
Query: 203 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
L++ P+ +L + + G NG QLG+GTT + P QV +V V CG
Sbjct: 77 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLIKQVVEVACG 136
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 137 SHHSMALAADGEVFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLH---IKRVVGI 186
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 187 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 251
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMW 310
Query: 276 GMEKG 280
G +G
Sbjct: 311 GQCRG 315
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/137 (31%), Positives = 62/137 (45%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTV 129
++ V G S+A+ G ++ WG NC G S + TP V + H V
Sbjct: 129 QVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTANQPTPRKVTNCLHIKRV 183
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V +ACG +A++ GE Y WG N NGQLGLG+ ++L P + +
Sbjct: 184 VGIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLTPVRVAALHSV-- 233
Query: 190 WAVYEVTCGSFHTALLT 206
V ++ CG HT LT
Sbjct: 234 -CVNQIVCGYAHTLALT 249
Score = 106 (42.4 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 50/187 (26%), Positives = 77/187 (41%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 261
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 340
L + +SP I + + V++A C +AHT G ++ WG
Sbjct: 262 ----YGQLGTGNKNNLLSPAHIM------VEKERVVEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 341 --RGRSGVLG-------TGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 391
RG+S +L T FA V W L+ E +D L + +K K+ +
Sbjct: 312 QCRGQSVILPHLTHFSCTDDVFACFATPAVSWRLLSVEH-EDFLTVA---ESLK-KEFDS 366
Query: 392 AEERDEK 398
E D K
Sbjct: 367 PETADLK 373
Score = 104 (41.7 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 34/111 (30%), Positives = 55/111 (49%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPR 172
>UNIPROTKB|E1BKF7 [details] [associations]
symbol:RCBTB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097 SMART:SM00225
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005737 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104208 CTD:55213 KO:K11494
OMA:NCSNCLG EMBL:DAAA02032915 EMBL:DAAA02032914 IPI:IPI00826911
RefSeq:NP_001178141.1 UniGene:Bt.22187 Ensembl:ENSBTAT00000035796
GeneID:785222 KEGG:bta:785222 NextBio:20927167 Uniprot:E1BKF7
Length = 531
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 43/147 (29%), Positives = 68/147 (46%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G GQ+G G+T + P +V +V + CG + V G+V+ W
Sbjct: 148 EVFAW--GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGW 205
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 206 GYN---G---NGQLGLGNNGNQLTPVRVAAL--HSVCVN---QIVCGYAHTLALTDEGL- 253
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVL 362
L++WG G LGTG + +PA ++
Sbjct: 254 LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 64/222 (28%), Positives = 99/222 (44%)
Query: 144 SAGET-YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
SA E Y + + +G N + LG GD S L PK +E CG
Sbjct: 30 SANEALYVTDSDEVFVFGLNYSSCLGTGDNHSTLVPKKLEAL------------CGK-KI 76
Query: 203 ALLTHRKRPNDMLESMCWT-FGLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
L++ P+ +L + + G NG QLG+GTT L P QV +V V CG
Sbjct: 77 KSLSYGSGPHVLLSTEDGVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLIKQVVEVACG 136
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
H+ +++ G+V++WG G + S T N+ +P ++ N H + V +
Sbjct: 137 SHHSMALAADGEVFAWGYNN-CGQVGSGS-TANQP----TPRKVT-NCLH---IKRVVGI 186
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG ++ V D+G +++ WG +G LG G + P V
Sbjct: 187 ACGQTSSMAVLDNG-EVYGWGYNGNGQLGLGNNGNQLTPVRV 227
Score = 149 (57.5 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N NGQLGLG+ ++L P + + V ++ CG HT LT E
Sbjct: 203 YGWGYNGNGQLGLGNNGNQLTPVRVAALHSV---CVNQIVCGYAHTLALTD--------E 251
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS-AGDVWSW 275
+ + +G GQLG G + L P + + V ++ C HTS + G V+ W
Sbjct: 252 GLLYAWGANTYGQLGTGNKNNLLSPAHIMVEKERVIEIAA-CHSAHTSAAKTQGGHVYMW 310
Query: 276 GMEKG 280
G +G
Sbjct: 311 GQCRG 315
Score = 144 (55.7 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 47/149 (31%), Positives = 67/149 (44%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API++C+ V G S+A+ G ++ WG NC G S + TP
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHIKRVVGIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLT 206
P + + V ++ CG HT LT
Sbjct: 224 PVRVAALHSV---CVNQIVCGYAHTLALT 249
Score = 106 (42.4 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 51/188 (27%), Positives = 79/188 (42%)
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G NGQLG G + L P +V L V + + CG HT ++ G +++WG
Sbjct: 205 WGYNGNGQLGLGNNGNQLTPVRVAALHS-VCVNQIVCGYAHTLALTDEGLLYAWGANT-- 261
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG 340
L + +SP I + + +++A C +AHT G ++ WG
Sbjct: 262 ----YGQLGTGNKNNLLSPAHIM------VEKERVIEIAACHSAHTSAAKTQGGHVYMWG 311
Query: 341 --RGRSGVLG----TGKTIDFFA----PAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
RG+S L T D FA PA+ W L+ E +D L + +K K+ +
Sbjct: 312 QCRGQSVTLPHLTHLSSTDDVFACFATPAVT-WRLLSVEH-EDFLTVA---ESLK-KEFD 365
Query: 391 GAEERDEK 398
E D K
Sbjct: 366 SPETADLK 373
Score = 103 (41.3 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 33/111 (29%), Positives = 55/111 (49%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPR 172
>UNIPROTKB|J9NZT9 [details] [associations]
symbol:HERC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 EMBL:AAEX03016754 EMBL:AAEX03016753
Ensembl:ENSCAFT00000045241 Uniprot:J9NZT9
Length = 865
Score = 163 (62.4 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 47/129 (36%), Positives = 65/129 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG NN GQLGL D E R P ++ VY ++CG HTA+LT
Sbjct: 27 FGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK--VVY-ISCGEEHTAVLTK--------S 75
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG G GQLGH + + P +V EL + + CG HT + V S+G ++++
Sbjct: 76 GGVFTFGAGSCGQLGHDSMNDEVNPRRVLEL-MGSEVTQIACGRQHTLAFVPSSGLIYAF 134
Query: 276 GM-EKG-LG 282
G KG LG
Sbjct: 135 GCGAKGQLG 143
Score = 134 (52.2 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 42/152 (27%), Positives = 71/152 (46%)
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
P+ E + +G+ GQLG + P VK L + +V + CG HT+V++ +G
Sbjct: 18 PSQPAEGAVFGWGMNNAGQLGLSDEEDRESPCHVKLL-RTQKVVYISCGEEHTAVLTKSG 76
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLV 329
V+++G G C L + D ++P ++ G + Q+ACG HT+
Sbjct: 77 GVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG------SEVTQIACGRQHTLAF 124
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++++G G G LGTG T + P+ V
Sbjct: 125 VPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 156
>TAIR|locus:2025277 [details] [associations]
symbol:PRAF1 "AT1G76950" species:3702 "Arabidopsis
thaliana" [GO:0003682 "chromatin binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=ISS]
[GO:0008536 "Ran GTPase binding" evidence=ISS] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 INTERPRO:IPR000408 Pfam:PF00415 EMBL:CP002684
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0046872
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR013591 Pfam:PF08381
PROSITE:PS51514 HSSP:Q15075 EMBL:AF323270 IPI:IPI00521580
RefSeq:NP_565144.1 UniGene:At.19186 ProteinModelPortal:Q947D2
SMR:Q947D2 PRIDE:Q947D2 EnsemblPlants:AT1G76950.1 GeneID:844030
KEGG:ath:AT1G76950 TAIR:At1g76950 InParanoid:Q947D2 OMA:WIPKRIA
PhylomeDB:Q947D2 ProtClustDB:CLSN2686442 Genevestigator:Q947D2
Uniprot:Q947D2
Length = 1103
Score = 173 (66.0 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 65/218 (29%), Positives = 104/218 (47%)
Query: 146 GETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ Y +++C G + N L R L PK +E+ + V+++ CG H
Sbjct: 238 GDVYIWGEVICDNVVKVGIDKNASY-LTTRTDVLVPKPLES---NIVLDVHQIACGVRHA 293
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
A +T R ++ +T+G G+LGHG + P V+ L + V CG FH
Sbjct: 294 AFVT---RQGEI-----FTWGEESGGRLGHGIGKDVFHPRLVESLTATSSVDFVACGEFH 345
Query: 263 TSVVSSAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGN--GPHGPKFQDPVQV 319
T V+ AG++++WG +GL + S + I P I+G+ G H V
Sbjct: 346 TCAVTLAGELYTWGDGTHNVGLLGHGS----DISHWI-PKRIAGSLEGLH------VASV 394
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDF 355
+CG HT L+T G +L+++G G GVLG G +T+ +
Sbjct: 395 SCGPWHTALITSYG-RLFTFGDGTFGVLGHGDKETVQY 431
Score = 168 (64.2 bits), Expect = 7.5e-08, Sum P(2) = 7.5e-08
Identities = 56/209 (26%), Positives = 96/209 (45%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPN 212
+++G G LG GD+E+ P+ +E+ S V+CG +HTA ++ + +
Sbjct: 411 FTFGDGTFGVLGHGDKETVQYPREVESL---SGLRTIAVSCGVWHTAAVVEIIVTQSNSS 467
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ +T+G G+ +LGHG L P V L Y + + CG T ++++G V
Sbjct: 468 SVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALIDYNFH-KIACGHSLTVGLTTSGQV 526
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
++ G G N D P L+ +F + +++CGA H +T
Sbjct: 527 FTMGSTV-YGQLGNLQT------DGKLPCLVEDK--LASEFVE--EISCGAYHVAALTSR 575
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++++WG+G +G LG G D P IV
Sbjct: 576 N-EVYTWGKGANGRLGHGDLEDRKVPTIV 603
Score = 163 (62.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 62/262 (23%), Positives = 106/262 (40%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + SV G + I + G L+ +G+ G V P V G +
Sbjct: 389 LHVASVSCGPWHTALITSYGRLFTFGDGTFGVLG-HGDKETVQY--PREVESLSGLRTIA 445
Query: 132 VACGSEHVVALVSAGETYKGEDLVC----YSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V+CG H A+V T V ++WG + +LG GD++ RL+P +
Sbjct: 446 VSCGVWHTAAVVEIIVTQSNSSSVSSGKLFTWGDGDKNRLGHGDKDPRLKPTCVPALID- 504
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +++ CG T LT +T G GQLG+ T L P V++
Sbjct: 505 --YNFHKIACGHSLTVGLT--------TSGQVFTMGSTVYGQLGNLQTDGKL-PCLVEDK 553
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + CG +H + ++S +V++WG KG N L + D P ++
Sbjct: 554 LASEFVEEISCGAYHVAALTSRNEVYTWG--KGA----NGRLGHGDLEDRKVPTIVEALK 607
Query: 308 PHGPKFQDPVQVACGAAHTVLV 329
K+ +ACG+ +T +
Sbjct: 608 DRHVKY-----IACGSNYTAAI 624
Score = 134 (52.2 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 53/178 (29%), Positives = 74/178 (41%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS-FTPSPVWDFHGHTVV 130
+ + + G + + G ++ WG +S G + F P V + V
Sbjct: 281 LDVHQIACGVRHAAFVTRQGEIFTWGE----ESGGRLGHGIGKDVFHPRLVESLTATSSV 336
Query: 131 K-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H A+ AGE Y D G +N G LG G S PK I +
Sbjct: 337 DFVACGEFHTCAVTLAGELYTWGD------GTHNVGLLGHGSDISHWIPKRIAGSLEGLH 390
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V+CG +HTAL+T R +TFG G G LGHG ++ P +V+ L
Sbjct: 391 --VASVSCGPWHTALITSYGR--------LFTFGDGTFGVLGHGDKETVQYPREVESL 438
Score = 39 (18.8 bits), Expect = 2.2e-08, Sum P(2) = 2.2e-08
Identities = 18/52 (34%), Positives = 28/52 (53%)
Query: 369 EFKQDELNTGGLDDEIKTKD-LEGAEERDEKLSSAMEEMKLLQSKLS-VMER 418
EF++ EL + KT++ L AEE K +A E +K L ++L V E+
Sbjct: 857 EFQEVELQ----NSVKKTQEALALAEEESAKSRAAKEAIKSLIAQLKDVAEK 904
>FB|FBgn0035207 [details] [associations]
symbol:CG9153 species:7227 "Drosophila melanogaster"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=ISS;IBA]
[GO:0042787 "protein ubiquitination involved in ubiquitin-dependent
protein catabolic process" evidence=IBA] [GO:0005737 "cytoplasm"
evidence=IBA] [GO:0005634 "nucleus" evidence=IBA] Pfam:PF00632
InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 HSSP:Q05086 EMBL:AY128479 ProteinModelPortal:Q8MQN4
SMR:Q8MQN4 PaxDb:Q8MQN4 PRIDE:Q8MQN4 FlyBase:FBgn0035207
InParanoid:Q8MQN4 OrthoDB:EOG4WDBSR ChiTaRS:CG9153
ArrayExpress:Q8MQN4 Bgee:Q8MQN4 Uniprot:Q8MQN4
Length = 1058
Score = 164 (62.8 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 59/196 (30%), Positives = 98/196 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+ G+N+ QLG D ++ RP +I QD + + ++ CGS H+ L+ D +
Sbjct: 62 YACGSNDYSQLG-HDLPTK-RPLLIPEL-QD--YVIIQICCGSRHSLALS------DWGQ 110
Query: 217 SMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ W G + GQLGH T + + +P+ V++L +V + CG H+ ++S G+++SW
Sbjct: 111 VLSW--GDNDCGQLGHATDKEIVQLPKVVRQLVTKT-VVQIACGNNHSLALTSCGELYSW 167
Query: 276 GME-KG-LGL-CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
G G LG+ PN LT ++ +L G +ACG H+ L++
Sbjct: 168 GSNIYGQLGVNSPN-DLTHCNYPLRLTTLL-------GIPL---AAIACGGNHSFLISKS 216
Query: 333 GYKLWSWGRGRSGVLG 348
G ++ WGR G LG
Sbjct: 217 G-AVFGWGRNNCGQLG 231
Score = 158 (60.7 bits), Expect = 9.7e-08, P = 9.7e-08
Identities = 51/149 (34%), Positives = 71/149 (47%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG NN GQLGL D +R P ++T V V CG + LT+ E
Sbjct: 220 FGWGRNNCGQLGLNDETNRSYPTQLKTLRT---LGVRFVACGDEFSVFLTN--------E 268
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+T G G GQLGHG + + ++P V EL + V CG HT ++V S G V+++
Sbjct: 269 GGVFTCGAGAYGQLGHGFSSNEMLPRMVMELMGST-ITQVACGNRHTLALVPSRGRVYAF 327
Query: 276 GM-EKG-LGLCPNASLTRNEA--GDAISP 300
G+ G LG SL + G +SP
Sbjct: 328 GLGSSGQLGTRSTKSLMLPQVVIGPWVSP 356
Score = 147 (56.8 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 46/130 (35%), Positives = 65/130 (50%)
Query: 151 GEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
G++L C WG+ ++GQLGLG + E L P I + D+ AV +V CG HT LT
Sbjct: 4 GKELYC--WGSTSHGQLGLGGIEDEQILTPSQIP-WTPDT--AVQQVACGHRHTLFLTAT 58
Query: 209 KRPNDMLESMCWTFGLGENGQLGHG--TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+ + G + QLGH T + L+PE L YV ++ + CG H+ +
Sbjct: 59 GK--------VYACGSNDYSQLGHDLPTKRPLLIPE----LQDYV-IIQICCGSRHSLAL 105
Query: 267 SSAGDVWSWG 276
S G V SWG
Sbjct: 106 SDWGQVLSWG 115
Score = 127 (49.8 bits), Expect = 0.00023, P = 0.00023
Identities = 44/169 (26%), Positives = 74/169 (43%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRL 176
P + + + ++++ CGS H +AL G+ SWG N+ GQLG D+E
Sbjct: 81 PLLIPELQDYVIIQICCGSRHSLALSDWGQVL--------SWGDNDCGQLGHATDKEIVQ 132
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
PK++ + V ++ CG+ H+ LT ++ G+ L H
Sbjct: 133 LPKVVRQLVTKT---VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYP 189
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGL 283
L + +P L ++ CG H+ ++S +G V+ WG G LGL
Sbjct: 190 LRLTT--LLGIP----LAAIACGGNHSFLISKSGAVFGWGRNNCGQLGL 232
Score = 124 (48.7 bits), Expect = 0.00048, P = 0.00048
Identities = 53/181 (29%), Positives = 76/181 (41%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN--CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
I+IC G SLA+ + G + WG+ C +T+ +V P V TV
Sbjct: 93 IQIC---CGSRHSLALSDWGQVLSWGDNDCGQLGHATDK--EIVQ--LPKVVRQLVTKTV 145
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR---PKIIETFNQ 186
V++ACG+ H +AL S GE Y SWG+N GQLG+ P + T
Sbjct: 146 VQIACGNNHSLALTSCGELY--------SWGSNIYGQLGVNSPNDLTHCNYPLRLTTL-L 196
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
P A + CG H+ L++ + +G GQLG + P Q+K
Sbjct: 197 GIPLAA--IACGGNHSFLISK--------SGAVFGWGRNNCGQLGLNDETNRSYPTQLKT 246
Query: 247 L 247
L
Sbjct: 247 L 247
Score = 102 (41.0 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 42/149 (28%), Positives = 66/149 (44%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
FG G N GQLG + P Q+K L + + + V CG + +++ G V++ G
Sbjct: 220 FGWGRNNCGQLGLNDETNRSYPTQLKTL-RTLGVRFVACGDEFSVFLTNEGGVFTCGAGA 278
Query: 278 --EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
+ G G N L R + ++ G QVACG HT+ + +
Sbjct: 279 YGQLGHGFSSNEMLPR-----MVMELM-------GSTI---TQVACGNRHTLALVPSRGR 323
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
++++G G SG LGT T P +V+ P
Sbjct: 324 VYAFGLGSSGQLGTRSTKSLMLPQVVIGP 352
Score = 97 (39.2 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKG 151
L+ WG+ GG TPS + W V +VACG H + L + G+ Y
Sbjct: 7 LYCWGSTSHGQLGL-GGIEDEQILTPSQIPWT-PDTAVQQVACGHRHTLFLTATGKVY-- 62
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
C G+N+ QLG D ++ RP +I QD + + ++ CGS H+ L+
Sbjct: 63 ---AC---GSNDYSQLG-HDLPTK-RPLLIPEL-QD--YVIIQICCGSRHSLALS 106
>ZFIN|ZDB-GENE-070402-2 [details] [associations]
symbol:als2a "amyotrophic lateral sclerosis 2a
(juvenile)" species:7955 "Danio rerio" [GO:0035023 "regulation of
Rho protein signal transduction" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=ISS] [GO:0030425 "dendrite" evidence=ISS]
[GO:0005769 "early endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=ISS] [GO:0005813 "centrosome" evidence=ISS]
[GO:0014069 "postsynaptic density" evidence=ISS] [GO:0007528
"neuromuscular junction development" evidence=ISS] [GO:0030424
"axon" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0043197 "dendritic spine" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] InterPro:IPR000219 Pfam:PF00621 PROSITE:PS50010
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 ZFIN:ZDB-GENE-070402-2
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0005622 GO:GO:0005089
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:BK005193
UniGene:Dr.102729 ProteinModelPortal:I7L9G3 Uniprot:I7L9G3
Length = 1590
Score = 132 (51.5 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 27/91 (29%), Positives = 50/91 (54%)
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+++SV G +H S V+ G V WG E G C ++ + + +P+ + + H P
Sbjct: 81 HVISVSAGSYHCSAVTEDGLVLMWG-ENSYGQC---GVSGTDRVPSPTPVTVVDDETHPP 136
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
+ + VACGA HT+ +++ +++W+WG G
Sbjct: 137 QLVRVLNVACGAQHTLALSNK-HEVWAWGSG 166
Score = 111 (44.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 38/117 (32%), Positives = 57/117 (48%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G G GQLGHG L P +K L + +V + G H+ +++ V+SWG EK
Sbjct: 523 WSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKE-VVKITAGANHSLALTAQCQVYSWGSEK 581
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-DGYK 335
G L R + + P L + + G + D VA G HT+L+ D D Y+
Sbjct: 582 -FG-----QLGRMNSPSTV-PNLTTVSD--GIRVWD---VAAGQTHTLLLADGDCYQ 626
Score = 108 (43.1 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 51/168 (30%), Positives = 73/168 (43%)
Query: 107 EGGFSLVSSF--TP-SPVWDFHGHTVVKVACGSEHVVALVSAGETYKG---EDLVCYSWG 160
EGG V SF P PV V++ +HV++ VSAG + ED + WG
Sbjct: 49 EGG--QVYSFGEQPWKPVEPPPASLVLESTLSGQHVIS-VSAGSYHCSAVTEDGLVLMWG 105
Query: 161 ANNNGQLGLG--DRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLE 216
N+ GQ G+ DR P + P V V CG+ HT L+++
Sbjct: 106 ENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSNKHE------ 159
Query: 217 SMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHT 263
W +G G QLG T + P++V+ L Y+V + CG FH+
Sbjct: 160 --VWAWGSG--CQLGLVTNVFPVWKPQKVEHLVGR-YVVQIACGAFHS 202
Score = 107 (42.7 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 32/114 (28%), Positives = 53/114 (46%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLED-DSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG + G NS C + + +P + D +T+ +++ +V G +LA+ N
Sbjct: 98 DGLVLMWGENSYGQCGVSGTDRVPSPTPVTVVDDETHPPQLVRVLNVACGAQHTLALSNK 157
Query: 91 GALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+W WG+ C L F + + P V G VV++ACG+ H +ALV
Sbjct: 158 HEVWAWGSGCQL--GLVTNVFPV---WKPQKVEHLVGRYVVQIACGAFHSLALV 206
Score = 100 (40.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 40/138 (28%), Positives = 61/138 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT----- 128
+ SV AG A+ G + MWG G V S TP V D H
Sbjct: 82 VISVSAGSYHCSAVTEDGLVLMWGENSYGQCGVSGT-DRVPSPTPVTVVDDETHPPQLVR 140
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQD 187
V+ VACG++H +AL + E + +WG+ QLGL + +P+ +E +
Sbjct: 141 VLNVACGAQHTLALSNKHEVW--------AWGSGC--QLGLVTNVFPVWKPQKVE--HLV 188
Query: 188 SPWAVYEVTCGSFHTALL 205
+ V ++ CG+FH+ L
Sbjct: 189 GRYVV-QIACGAFHSLAL 205
Score = 99 (39.9 bits), Expect = 4.2e-07, Sum P(2) = 4.2e-07
Identities = 33/117 (28%), Positives = 58/117 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG + GQLG GD RL+P I++ ++ V ++T G+ H+ LT +
Sbjct: 523 WSWGKGHEGQLGHGDYLPRLQPLCIKSLSKKE---VVKITAGANHSLALT--------AQ 571
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
+++G + GQLG + S VP + + + + V G HT +++ GD +
Sbjct: 572 CQVYSWGSEKFGQLGRMNSPST-VPN-LTTVSDGIRVWDVAAGQTHTLLLAD-GDCY 625
Score = 65 (27.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 21/78 (26%), Positives = 36/78 (46%)
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+VWSWG KG L + + P+ I ++ V++ GA H++ +T
Sbjct: 521 EVWSWG--KG----HEGQLGHGDYLPRLQPLCIKSLSK-----KEVVKITAGANHSLALT 569
Query: 331 DDGYKLWSWGRGRSGVLG 348
+++SWG + G LG
Sbjct: 570 AQ-CQVYSWGSEKFGQLG 586
Score = 62 (26.9 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG+G G LG G + P +
Sbjct: 521 EVWSWGKGHEGQLGHGDYLPRLQPLCI 547
>WB|WBGene00017195 [details] [associations]
symbol:glo-4 species:6239 "Caenorhabditis elegans"
[GO:0019915 "lipid storage" evidence=IMP] [GO:0045202 "synapse"
evidence=IDA] [GO:0030424 "axon" evidence=IDA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0030424 GO:GO:0045202 GO:GO:0019915
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104208 EMBL:FO081074
PIR:T28816 PIR:T28817 RefSeq:NP_505392.2 ProteinModelPortal:Q5DX34
SMR:Q5DX34 STRING:Q5DX34 PaxDb:Q5DX34 EnsemblMetazoa:F07C3.4
GeneID:179306 KEGG:cel:CELE_F07C3.4 UCSC:F07C3.4 CTD:179306
WormBase:F07C3.4 HOGENOM:HOG000021586 InParanoid:Q5DX34 OMA:MANHEDV
NextBio:904820 Uniprot:Q5DX34
Length = 1392
Score = 172 (65.6 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 65/243 (26%), Positives = 101/243 (41%)
Query: 103 DSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGAN 162
DS T G +L P+P + H V++ G +A + +WG N
Sbjct: 747 DSVTNGAPTLPP---PAPKPEQHLPRVLEYPGGRPRAIACGAEHILVLSSSGQLSAWGGN 803
Query: 163 NNGQLGLGDRESRLRPKIIETFNQDSPW-AVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
GQ G+G +I D W A+ ++ CG FH+A + + WT
Sbjct: 804 RFGQCGVGHSF-----RIANLHQVDGDWPAIEKIACGQFHSAFICS--------DGSLWT 850
Query: 222 FGLGENGQLGHG--TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
FG G GQLGHG + LVP +V L + + CG HT V++ G V
Sbjct: 851 FGWGVWGQLGHGGRNNSNQLVPTRVNGL--ICKVTQIACGRAHTVVLTDTGRVL------ 902
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWS 338
+C + S + D I + P GP + +D +A H++ +T+D +++
Sbjct: 903 ---VCGSGSYGQMGVDDDIKKVFAFTPLPLGPLRVRD---IATHYYHSICITEDN-RVFE 955
Query: 339 WGR 341
WGR
Sbjct: 956 WGR 958
Score = 134 (52.2 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 53/189 (28%), Positives = 94/189 (49%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+VSV CGL H+++++S G +++WG KGL + L + + P + P+G K
Sbjct: 1024 IVSVACGLSHSALITSEGTLYTWG--KGL----DYQLGHGNKNERMEPHQVFE--PNGAK 1075
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGR---GRSGVLG--TGKTID----FFAPAIV-- 361
+ V V+ G HT+ TDDG +++WG+ G+ GVL G + D FF A
Sbjct: 1076 W---VNVSLGNNHTIASTDDG-SVFAWGKNDFGQCGVLTKKNGNSADVTKKFFFQARDGR 1131
Query: 362 LWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYAS 421
+ P +E + GL +++ ++L E+ +E + +L S ++V++ +
Sbjct: 1132 RFMPNVDE--SQFVQKPGLIPDVRVRNLN--EDGNEGVDKEEIVDRLKASDVNVVQAVSK 1187
Query: 422 ILHGSIFGK 430
L+ I GK
Sbjct: 1188 HLYSPIEGK 1196
Score = 42 (19.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 17/90 (18%), Positives = 33/90 (36%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ + G ++ + + G + + G+ + V +FTP P+ V +
Sbjct: 881 KVTQIACGRAHTVVLTDTGRVLVCGSGSYGQMGVDDDIKKVFAFTPLPLGPLR---VRDI 937
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGAN 162
A H + + ED + WG N
Sbjct: 938 ATHYYHSICIT--------EDNRVFEWGRN 959
Score = 41 (19.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 11/31 (35%), Positives = 13/31 (41%)
Query: 59 SLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
SL SK K P + V AG M + N
Sbjct: 323 SLAHSSKRTFKVPPETWMVHAGDNMLFTVSN 353
>UNIPROTKB|Q96I51 [details] [associations]
symbol:WBSCR16 "Williams-Beuren syndrome chromosomal region
16 protein" species:9606 "Homo sapiens" [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 Orphanet:904 MIM:194050
EMBL:AF410455 EMBL:AL136804 EMBL:CH471292 EMBL:BC007823
EMBL:BC019008 IPI:IPI00305992 RefSeq:NP_110425.1 UniGene:Hs.723684
ProteinModelPortal:Q96I51 SMR:Q96I51 IntAct:Q96I51 STRING:Q96I51
PhosphoSite:Q96I51 DMDM:116242843 PaxDb:Q96I51 PeptideAtlas:Q96I51
PRIDE:Q96I51 DNASU:81554 Ensembl:ENST00000329959 GeneID:81554
KEGG:hsa:81554 UCSC:uc003ubr.3 CTD:81554 GeneCards:GC07M074456
HGNC:HGNC:14948 neXtProt:NX_Q96I51 PharmGKB:PA37941
HOGENOM:HOG000232125 HOVERGEN:HBG054246 InParanoid:Q96I51
OMA:MVTLAKS OrthoDB:EOG4F1X33 PhylomeDB:Q96I51 ChiTaRS:WBSCR16
GenomeRNAi:81554 NextBio:71806 ArrayExpress:Q96I51 Bgee:Q96I51
CleanEx:HS_WBSCR16 Genevestigator:Q96I51 GermOnline:ENSG00000174374
Uniprot:Q96I51
Length = 464
Score = 112 (44.5 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 34/107 (31%), Positives = 51/107 (47%)
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG +V++ G V+ WG LG PN L + + I P L G P+ Q
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LVESAVPEMIPPTLF-GLTEFNPEIQVS- 397
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
++ CG +H +T+ G +L+ WG+ G LG G+ D + P V P
Sbjct: 398 RIRCGLSHFAALTNKG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 443
Score = 92 (37.4 bits), Expect = 3.3e-08, Sum P(2) = 3.3e-08
Identities = 45/145 (31%), Positives = 63/145 (43%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
D QLGF S E L +P SL D ++ V G SL + +
Sbjct: 139 DSQLGFHRSRKDKTRGYEYVLE-PSPVSLPLDRPQE----TRVLQVSCGRAHSLVLTDRE 193
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSS--FTPSP----VWDFHGHTVVKVACGSEHVVALVSA 145
++ GN +S + G +V + ++ S + DF G VV+VACG +H + L
Sbjct: 194 GVFSMGN----NSYGQCGRKVVENEIYSESHRVHRMQDFDGQ-VVQVACGQDHSLFLTDK 248
Query: 146 GETYKGEDLVCYSWGANNNGQLGLG 170
GE Y C WGA+ GQ GLG
Sbjct: 249 GEVYS-----C-GWGAD--GQTGLG 265
>UNIPROTKB|F1NXV1 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0030292 "protein tyrosine kinase inhibitor activity"
evidence=IEA] [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:AADN02002424 EMBL:AADN02002425
IPI:IPI00590269 Ensembl:ENSGALT00000025575 Uniprot:F1NXV1
Length = 1359
Score = 173 (66.0 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 47/149 (31%), Positives = 77/149 (51%)
Query: 149 YKGEDLV-CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+K DL Y+WG N N LG G ++S+ P++++ F ++S + V C FH+ L+H
Sbjct: 139 FKKTDLTEVYTWGNNINFTLGHGGQQSKHHPELVDLFPRNSVYIKQVVLC-KFHSVFLSH 197
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ +T G G+ G+LGHG Q+ LVP V+ L + + HT V++
Sbjct: 198 K--------GQIYTCGHGQGGRLGHGDEQTCLVPRLVEGLSSH-QCSQIAAAKDHTVVLT 248
Query: 268 SAGDVWSWGMEK--GLGLCP---NASLTR 291
G V+++G+ LG+ P N S+ R
Sbjct: 249 EDGCVYTFGLNTFHQLGILPPPANCSVPR 277
Score = 39 (18.8 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 392
I+ P T K D+ N+ E+ T D EG+
Sbjct: 1004 IIQSPASTGSIKLDKTNSVESLPELLTSDSEGS 1036
>UNIPROTKB|F1RMH6 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:CT868688
Ensembl:ENSSSCT00000002041 Uniprot:F1RMH6
Length = 382
Score = 111 (44.1 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 30/82 (36%), Positives = 44/82 (53%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G +GQLGHGT ++ P +V E Q + + V G +H+ VS GD++ WG E
Sbjct: 186 FSWGGGRHGQLGHGTLEAEREP-RVLEALQGLPMAEVAAGGWHSVCVSETGDIYIWGWNE 244
Query: 279 KGLGLCPNASLTRNE---AGDA 297
G P SL + GDA
Sbjct: 245 SGQLALPARSLAEDGKTITGDA 266
Score = 102 (41.0 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 31/100 (31%), Positives = 49/100 (49%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ G+EH + L +AG+ + SWG +GQLG G E+ P+++E Q P
Sbjct: 168 RLELGAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAEREPRVLEAL-QGLPM 218
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
A EV G +H+ ++ D+ W G E+GQL
Sbjct: 219 A--EVAAGGWHSVCVSET---GDIY---IW--GWNESGQL 248
Score = 90 (36.7 bits), Expect = 3.8e-08, Sum P(2) = 3.8e-08
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P V
Sbjct: 303 PLGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHKDTTSLDRPCRV 352
Score = 75 (31.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/67 (35%), Positives = 34/67 (50%)
Query: 228 GQLGHGTTQSALVP-EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLC 284
G+ G T A+ P + +LP V CG HT+VV+ G++++WG K G LG
Sbjct: 282 GEDGGPTPFIAVQPFPALLDLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGKYGQLGHK 341
Query: 285 PNASLTR 291
SL R
Sbjct: 342 DTTSLDR 348
Score = 74 (31.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 28/104 (26%), Positives = 44/104 (42%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP ++ ++ G +L +D AG ++ WG G +L + P + G
Sbjct: 161 APTLRARRLELGAEHALLLDAAGQVFSWGG---GRHGQLGHGTLEAEREPRVLEALQGLP 217
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ +VA G H V + G+ Y WG N +GQL L R
Sbjct: 218 MAEVAAGGWHSVCVSETGDIY--------IWGWNESGQLALPAR 253
>RGD|1563497 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide exchange
factor" species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA;ISO] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA;ISO] InterPro:IPR027048 RGD:1563497
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 OrthoDB:EOG4J1183
PANTHER:PTHR22870:SF7 IPI:IPI00360920 Ensembl:ENSRNOT00000015352
UCSC:RGD:1563497 Uniprot:D3ZN16
Length = 339
Score = 154 (59.3 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 57/196 (29%), Positives = 87/196 (44%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G N +GQLGLG E LR I + P + +V CG T +LT + +L C
Sbjct: 74 GLNKDGQLGLGHTEEVLRFTICKPL-LGCP--IRQVACGWDFTIMLTEK---GQVLS--C 125
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
+ G+ G + HG + +VP+ ++ L + V V V GL H + G + WG
Sbjct: 126 GSNAFGQLG-VPHGP-RKCVVPQAIECLREKV--VCVAAGLRHALATTDTGSTFQWGTGL 181
Query: 278 -EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC---GAAHTVLVTDDG 333
G LCP +L P+ ++ P + V C G+ H+ +TD G
Sbjct: 182 ASSGRRLCPGQNL----------PLFLTAKEPSRVTGLESSTVVCAVAGSDHSASLTDTG 231
Query: 334 YKLWSWGRGRSGVLGT 349
+L+ WGR + G L +
Sbjct: 232 -ELYVWGRNKHGQLAS 246
Score = 119 (46.9 bits), Expect = 0.00033, P = 0.00033
Identities = 40/122 (32%), Positives = 60/122 (49%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
V ++WGAN+ GQLGLG +E L P+ + F + + VT G H+ ++T +
Sbjct: 16 VLFAWGANSYGQLGLGHKEDVLLPQQLSDFCKSG--CIKSVTGGGGHSVVVTDG---GGL 70
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+C GL ++GQLG G T+ L K L + V CG T +++ G V S
Sbjct: 71 F--VC---GLNKDGQLGLGHTEEVLRFTICKPLLGCP-IRQVACGWDFTIMLTEKGQVLS 124
Query: 275 WG 276
G
Sbjct: 125 CG 126
>DICTYBASE|DDB_G0284187 [details] [associations]
symbol:Dd5P2 "inositol 5-phosphatase" species:44689
"Dictyostelium discoideum" [GO:0046856 "phosphatidylinositol
dephosphorylation" evidence=IDA] [GO:0046855 "inositol phosphate
dephosphorylation" evidence=IDA] [GO:0034485
"phosphatidylinositol-3,4,5-trisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0004445 "inositol-polyphosphate 5-phosphatase
activity" evidence=IDA] [GO:0004439
"phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity"
evidence=IDA] [GO:0046854 "phosphatidylinositol phosphorylation"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000300 SMART:SM00128 dictyBase:DDB_G0284187
INTERPRO:IPR000408 Pfam:PF00415 GenomeReviews:CM000153_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR005135
SUPFAM:SSF56219 EMBL:AAFI02000064 GO:GO:0046854 GO:GO:0046855
GO:GO:0004439 GO:GO:0046856 GO:GO:0004445 eggNOG:COG5411
GO:GO:0034485 RefSeq:XP_638694.1 ProteinModelPortal:Q54PV1
EnsemblProtists:DDB0191414 GeneID:8624525 KEGG:ddi:DDB_G0284187
InParanoid:Q54PV1 OMA:SHEKMER Uniprot:Q54PV1
Length = 1800
Score = 175 (66.7 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 77/262 (29%), Positives = 115/262 (43%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV V+CG H + L S YK +S G N GQLG+ + P ++T S
Sbjct: 76 VVSVSCGFNHTLLLTSE---YK-----IFSMGFNQTGQLGIENVVDSAVPLPVDTL---S 124
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG------------TTQ 236
+ V ++ G+ +A +T D+ CW G GQLG+G T
Sbjct: 125 KFNVIKIKAGNNVSAAITEA---GDLY---CW--GSSAYGQLGNGKMNAKLHSFTPTTIL 176
Query: 237 SALVPEQVKELPQYVYLVSVD-C-GLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLT 290
+ L+P+ K+ P Y L + C G HT +S+ G ++SWG + GLG C NA L
Sbjct: 177 NPLIPDAEKDDPIYQNLQYTNICFGAQHTIAISTTGAIFSWGSNQYGQLGLGHC-NAKLV 235
Query: 291 ----------RNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
AG S +++ + + V +ACG H+ L+T +G L+ W
Sbjct: 236 PVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLTLEG-DLFLW 294
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G + G LG G ++D P V
Sbjct: 295 GSNQYGQLGQGDSLDQSVPKTV 316
Score = 39 (18.8 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 369 EFKQDELN----TGGLDDEIKTKDLEGAEERDEK 398
E +D LN T +DE D E EE DE+
Sbjct: 1182 EIAKDSLNYPHHTDDEEDEDDGDDEEEEEEEDEE 1215
>UNIPROTKB|F1S9B1 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050709 "negative regulation of protein secretion"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GO:GO:0050709 GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:CU914672 EMBL:CU467662 EMBL:CU693468
Ensembl:ENSSSCT00000014607 OMA:VYQWGTG Uniprot:F1S9B1
Length = 338
Score = 153 (58.9 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 64/211 (30%), Positives = 95/211 (45%)
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
SA T +G VC G N +GQLGLG E L + ++ P + +V CG T
Sbjct: 61 SAIVTDQGSLFVC---GLNKDGQLGLGHTEDVLYFTLCKSL-LGCP--IQQVACGWDFTI 114
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
+LT N + S C G GQLG HG + +VP+ ++ + V VS+ GL
Sbjct: 115 ILTK----NGQVLS-C---GSNSFGQLGVPHGPRR-CVVPQAIEVQREKV--VSIAAGLR 163
Query: 262 HTSVVSSAGDVWSWGM---EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
H +++G V+ WG G LCP +L S + + G + V
Sbjct: 164 HALAATASGLVFQWGTGLASSGRRLCPGQTLPLFLTAKEPSKVTV------GLENSQAVC 217
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
V G+ H+ +TD G +L+ WG + G L +
Sbjct: 218 VLAGSGHSASLTDAG-ELYVWGSNKHGQLAS 247
Score = 136 (52.9 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WGAN+ GQLGLG +E L P+ + F + P V +T G H+A++T + +
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLSEFCK--PGCVKRITGGGGHSAIVTDQ---GSLF- 71
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+C GL ++GQLG G T+ L K L + V CG T +++ G V S G
Sbjct: 72 -VC---GLNKDGQLGLGHTEDVLYFTLCKSLLGCP-IQQVACGWDFTIILTKNGQVLSCG 126
>UNIPROTKB|F1RJL0 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 OMA:MVTLAKS
EMBL:FP326664 RefSeq:XP_003354559.2 Ensembl:ENSSSCT00000008468
GeneID:100513850 KEGG:ssc:100513850 Uniprot:F1RJL0
Length = 470
Score = 107 (42.7 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 34/107 (31%), Positives = 50/107 (46%)
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG +V++ G V+ WG LG PN L + I P L G P+ +
Sbjct: 349 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LVETALPEMIPPTLF-GLTELNPEVRVS- 403
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
++ CG +H +TD G +L+ WG+ G LG G+ D + P V P
Sbjct: 404 RIRCGLSHFAALTDRG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 449
Score = 95 (38.5 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 48/179 (26%), Positives = 74/179 (41%)
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ L S P P+ V++V+CG H + L GE + +S G N+ GQ G
Sbjct: 163 YVLEPSPVPLPLHRPQETQVLQVSCGRAHSLVLTD------GEGV--FSMGNNSYGQCGR 214
Query: 170 GDRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
E+ + + + QD V +V CG H+ LT + ++ G G +G
Sbjct: 215 KVVENEIYSESHKVHRMQDFDGQVVQVACGQDHSLFLTDKGE--------VYSCGWGADG 266
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSV----DCGLFHTSVVSSAGDVWSWGMEKGLGL 283
Q G G P ++ V +V V DC L VS+ G ++ WG + L L
Sbjct: 267 QTGLGHYNITSAPTKLGGDLAGVNVVQVATYGDCCL----AVSADGSLFGWGNSEYLQL 321
>UNIPROTKB|E2RSG1 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0005089 "Rho guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0005622 GO:GO:0005089 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0035023
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 KO:K04575 OMA:AKPAIDF
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AAEX03018021
RefSeq:XP_003640234.1 Ensembl:ENSCAFT00000019642 GeneID:100856109
KEGG:cfa:100856109 Uniprot:E2RSG1
Length = 1656
Score = 109 (43.4 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 39 GSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW 96
G NS C + +Q++ P S+ D S+T+ ++I + G +LA+ + +W W
Sbjct: 116 GENSAGQCAVANQQYVPEPNPVSISD-SETSSLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 97 GN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
G C L +T F + P V G V++VACG+ H +ALV
Sbjct: 175 GTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQVACGAFHSLALV 217
Score = 105 (42.0 bits), Expect = 6.7e-08, Sum P(2) = 6.7e-08
Identities = 24/64 (37%), Positives = 36/64 (56%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSVDCGLFHTSVVSSAGDV 272
L + WT+G G+ GQLGHG L P VK L + +YL + G +H+ +++ V
Sbjct: 523 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKEVIYL---EAGGYHSLALTAKSQV 579
Query: 273 WSWG 276
+SWG
Sbjct: 580 YSWG 583
Score = 89 (36.4 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 24/76 (31%), Positives = 37/76 (48%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG GQLG GD RL+P ++ D +Y + G +H+ LT +
Sbjct: 528 WTWGKGKEGQLGHGDVLPRLQPLCVKCL--DGKEVIY-LEAGGYHSLALTAK-------- 576
Query: 217 SMCWTFGLGENGQLGH 232
S +++G GQLGH
Sbjct: 577 SQVYSWGSNTFGQLGH 592
Score = 81 (33.6 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 34/138 (24%), Positives = 61/138 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+ +V +G + A+ +G +MWG C + + + VS + S
Sbjct: 93 VVTVASGSFHNGAVTESGVAYMWGENSAGQCAVANQQYVPEPNPVS-ISDSETSSLLAVR 151
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQD 187
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL--- 198
Query: 188 SPWAVYEVTCGSFHTALL 205
+ V +V CG+FH+ L
Sbjct: 199 AGRVVLQVACGAFHSLAL 216
>UNIPROTKB|E1B8U7 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
OMA:ERPGAWF GeneTree:ENSGT00700000104312 EMBL:DAAA02052163
IPI:IPI00710464 UniGene:Bt.111664 Ensembl:ENSBTAT00000024803
NextBio:20875558 Uniprot:E1B8U7
Length = 377
Score = 114 (45.2 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G +GQLGHGT ++ P ++ L Q + + V G +H+ +S GD++ WG E
Sbjct: 181 FSWGAGRHGQLGHGTLEAEPEPRLLEAL-QGLRMAEVAAGGWHSVCLSETGDIYIWGWNE 239
Query: 279 KGLGLCPNASLT---RNEAGDA 297
G P SL + AG+A
Sbjct: 240 SGQLALPTKSLAEDGKTTAGEA 261
Score = 99 (39.9 bits), Expect = 3.2e-06, Sum P(2) = 3.2e-06
Identities = 34/108 (31%), Positives = 51/108 (47%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ G+EH + L +AG+ + SWGA +GQLG G E+ P+++E Q
Sbjct: 163 RLELGAEHALLLDAAGQVF--------SWGAGRHGQLGHGTLEAEPEPRLLEAL-QGLRM 213
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
A EV G +H+ L+ D+ W G E+GQL T A
Sbjct: 214 A--EVAAGGWHSVCLSET---GDIY---IW--GWNESGQLALPTKSLA 251
Score = 89 (36.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVY 252
+V+CGS HTA+LT R ++ +T+G G+ GQLGH T + P +V+ + + +
Sbjct: 305 KVSCGSRHTAVLT---RTGEL-----YTWGWGKYGQLGHKDTTTLDRPCRVEYFVDKQLQ 356
Query: 253 LVSVDCGLFHTSV 265
+ +V CG ++T V
Sbjct: 357 VRTVSCGPWNTYV 369
Score = 84 (34.6 bits), Expect = 7.0e-08, Sum P(2) = 7.0e-08
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ V+V+CG+ HT ++T G +L++WG G+ G LG T P V
Sbjct: 302 EAVKVSCGSRHTAVLTRTG-ELYTWGWGKYGQLGHKDTTTLDRPCRV 347
Score = 73 (30.8 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 28/101 (27%), Positives = 43/101 (42%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP ++ ++ G +L +D AG ++ WG G +L + P + G
Sbjct: 156 APTLRARRLELGAEHALLLDAAGQVFSWG---AGRHGQLGHGTLEAEPEPRLLEALQGLR 212
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ +VA G H V L G+ Y WG N +GQL L
Sbjct: 213 MAEVAAGGWHSVCLSETGDIY--------IWGWNESGQLAL 245
Score = 68 (29.0 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/26 (42%), Positives = 18/26 (69%)
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEK 279
V V CG HT+V++ G++++WG K
Sbjct: 304 VKVSCGSRHTAVLTRTGELYTWGWGK 329
>RGD|1309901 [details] [associations]
symbol:Rccd1 "RCC1 domain containing 1" species:10116 "Rattus
norvegicus" [GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA;ISO] RGD:1309901 INTERPRO:IPR000408
Pfam:PF00415 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 CTD:91433
OrthoDB:EOG41NTMF GeneTree:ENSGT00700000104312 IPI:IPI00391295
RefSeq:XP_218819.5 UniGene:Rn.225183 Ensembl:ENSRNOT00000029471
GeneID:308760 KEGG:rno:308760 UCSC:RGD:1309901 NextBio:659480
Uniprot:D3ZG92
Length = 378
Score = 111 (44.1 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
+++G G +GQLGHG+ ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 183 FSWGGGRHGQLGHGSLEAELEPRLLEAL-QGLRMAEVAAGGWHSVCVSETGDIYIWGWNE 241
Query: 279 KGLGLCPNASLTRNE 293
G P S T +
Sbjct: 242 SGQLALPTRSGTEKK 256
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 38/122 (31%), Positives = 57/122 (46%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++ G+EH + L AG+ + SWG +GQLG G E+ L P+++E Q
Sbjct: 163 VRQLQLGAEHALLLCEAGQVF--------SWGGGRHGQLGHGSLEAELEPRLLEAL-QGL 213
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---TQSALVPEQVK 245
A EV G +H+ ++ D+ W G E+GQL T T+ V E+
Sbjct: 214 RMA--EVAAGGWHSVCVSET---GDIY---IW--GWNESGQLALPTRSGTEKKTVREEAT 263
Query: 246 EL 247
EL
Sbjct: 264 EL 265
Score = 87 (35.7 bits), Expect = 7.4e-08, Sum P(2) = 7.4e-08
Identities = 17/38 (44%), Positives = 25/38 (65%)
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P D V+ +CG+ HT +VT G +L++WG G+ G LG
Sbjct: 299 PLGSDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLG 335
Score = 69 (29.3 bits), Expect = 8.7e-06, Sum P(2) = 8.7e-06
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+LP V CG HT+VV+ G++++WG K
Sbjct: 297 DLPLGSDAVKASCGSRHTAVVTRTGELYTWGWGK 330
>DICTYBASE|DDB_G0276527 [details] [associations]
symbol:DDB_G0276527 "putative bifunctional
serine/threonine-protein kinase/ubiquitin-protein ligase
DDB_G0276527" species:44689 "Dictyostelium discoideum" [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0006468 "protein phosphorylation" evidence=IEA]
[GO:0006464 "cellular protein modification process" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0004672 "protein kinase activity"
evidence=IEA] [GO:0016874 "ligase activity" evidence=IEA]
[GO:0016740 "transferase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016301 "kinase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=IEA] Pfam:PF00632
InterPro:IPR000569 InterPro:IPR000719 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 PROSITE:PS50237 SMART:SM00119 UniPathway:UPA00143
dictyBase:DDB_G0276527 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005524 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0005622 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AAFI02000015 SUPFAM:SSF56204 HSSP:Q9H0M0
RefSeq:XP_643080.1 ProteinModelPortal:Q8SSY6
EnsemblProtists:DDB0219986 GeneID:8620484 KEGG:ddi:DDB_G0276527
InParanoid:Q8SSY6 OMA:IITIIVE Uniprot:Q8SSY6
Length = 1887
Score = 159 (61.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 64/233 (27%), Positives = 100/233 (42%)
Query: 59 SLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP 118
SL +S +N+ IKI + G S I + G L+ +G G SL+ TP
Sbjct: 326 SLSQNSSSNNNK-IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL-GEQSLLMQSTP 383
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR- 177
V GH ++ ++ G H + L T KG LV +S+G N+ GQLG+G ++
Sbjct: 384 KLVQSLQGHFIIDMSSGGGHSLVL-----TNKG--LV-FSFGRNDQGQLGIGCFSNQQTI 435
Query: 178 PKIIETFN-----QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG- 231
PK I+ F Q P + +V+ G +H+ ++ ND + W G + G LG
Sbjct: 436 PKQIQWFQTSQQQQQQPINIIKVSAGGYHSIAISDN---ND---TYAW--GRSDYGVLGT 487
Query: 232 ----HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
G ++ + V + V G H +S G ++SWG G
Sbjct: 488 SIDVQGDRNLPVLINSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAG 540
Score = 125 (49.1 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 43/165 (26%), Positives = 85/165 (51%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV---PEQVKELP 248
+ +++CG+ +A++T + + +TFG G++G+LG G QS L+ P+ V+ L
Sbjct: 340 IVKLSCGTNRSAVITDK--------GLLFTFGRGDHGRLGLGE-QSLLMQSTPKLVQSLQ 390
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
+ +++ + G H+ V+++ G V+S+G + G+G N + I S
Sbjct: 391 GH-FIIDMSSGGGHSLVLTNKGLVFSFGRNDQGQLGIGCFSNQQTIPKQ----IQWFQTS 445
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
P + ++V+ G H++ ++D+ ++WGR GVLGT
Sbjct: 446 QQQQQQPI--NIIKVSAGGYHSIAISDNN-DTYAWGRSDYGVLGT 487
Score = 88 (36.0 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 34/105 (32%), Positives = 49/105 (46%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT---V 129
KI + G + S I + G L+ +G+ L G +L S +P V F V
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLL---GKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
V +A G +H +AL G+ Y SWG N++ QLGLG+ S
Sbjct: 246 VSIANGGKHSLALTICGKVY--------SWGGNDSCQLGLGNGSS 282
Score = 73 (30.8 bits), Expect = 2.4e-06, Sum P(3) = 2.4e-06
Identities = 20/74 (27%), Positives = 34/74 (45%)
Query: 136 SEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
++ + L+S G + + Y++G G+LG G+ ES PK++E F V
Sbjct: 186 NQQKIVLISTGAIHSSFITDQGNLYTFGDGLLGKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 193 YEVTCGSFHTALLT 206
+ G H+ LT
Sbjct: 246 VSIANGGKHSLALT 259
Score = 57 (25.1 bits), Expect = 9.1e-05, Sum P(3) = 9.1e-05
Identities = 15/49 (30%), Positives = 26/49 (53%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWG---NCPLP--DSSTEGGFSL 112
K +++ S+ GG SLA+ G ++ WG +C L + S+ +SL
Sbjct: 240 KPSLRVVSIANGGKHSLALTICGKVYSWGGNDSCQLGLGNGSSSSYYSL 288
Score = 47 (21.6 bits), Expect = 7.6e-08, Sum P(3) = 7.6e-08
Identities = 17/88 (19%), Positives = 37/88 (42%)
Query: 373 DELNTGGLDDEIKTKDLEGAEER--DEKLSSAMEEMKLLQSKLSVMERYASILHGSI--F 428
+ +N+ ++D + E+ +E + +E KLL ++ + E IL + F
Sbjct: 1070 NNINSNSINDSSNNNNNNNNIEKLKNELIKLKKDEQKLLSNQQEINELIIEILDKYVPEF 1129
Query: 429 GKPFAAEQDIPISLKDMGFFDITKEWEN 456
A I +KD G +++++
Sbjct: 1130 KIKLRANDKISSRIKDTGLLVTDRKFQH 1157
>UNIPROTKB|F1SI31 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408
Pfam:PF00415 Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
Ensembl:ENSSSCT00000017539 Uniprot:F1SI31
Length = 1644
Score = 108 (43.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 33/108 (30%), Positives = 53/108 (49%)
Query: 39 GSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW 96
G NS C + +Q++ P S+ D S+T+ ++I + G +LA+ + +W W
Sbjct: 116 GENSAGQCAVANQQYVPEPNPVSISD-SETSPLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 97 GN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
G C L +T F + P V G V++VACG+ H +ALV
Sbjct: 175 GTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQVACGAFHSLALV 217
Score = 104 (41.7 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L + WT+G G++GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 518 LRTEVWTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 576
Query: 275 WG 276
WG
Sbjct: 577 WG 578
Score = 88 (36.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 26/89 (29%), Positives = 41/89 (46%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG +GQLG GD RL+P ++ + V + G +H+ LT +
Sbjct: 523 WTWGKGKDGQLGHGDVLPRLQPLCVKCLDGKE---VIHLEAGGYHSLALTAK-------- 571
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVK 245
S +++G GQLGH + VP K
Sbjct: 572 SQVYSWGSNTFGQLGHSDFPTT-VPRLAK 599
Score = 87 (35.7 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 36/140 (25%), Positives = 62/140 (44%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 126
+ +V G S A+ +G ++MWG C + + E +S SP+
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENSAGQCAVANQQYVPEPNPVSISDSETSPLLAVR- 151
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 185
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 --ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL- 198
Query: 186 QDSPWAVYEVTCGSFHTALL 205
+ V +V CG+FH+ L
Sbjct: 199 --AGRVVLQVACGAFHSLAL 216
>UNIPROTKB|E2R5W9 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 OMA:ERPGAWF GeneTree:ENSGT00700000104312
EMBL:AAEX03002330 EMBL:AAEX03002329 Ensembl:ENSCAFT00000035362
Uniprot:E2R5W9
Length = 313
Score = 103 (41.3 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 35/119 (29%), Positives = 55/119 (46%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ G+EH + L AG+ + SWG +GQLG G E+ P+++E Q P
Sbjct: 99 RLELGAEHALLLDEAGQVF--------SWGQGRHGQLGHGSLEAEPEPRLLEAL-QGLP- 148
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V EV G +H+ ++ D+ W G E+GQL S + E K +P+
Sbjct: 149 -VAEVAAGGWHSVCVSET---GDIY---IW--GWNESGQLA---LPSRSLAEDTKTIPR 195
Score = 89 (36.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P D V+ +CG+ HT +VT G +L++WG G+ G LG T P V
Sbjct: 234 PLGADVVKASCGSRHTAVVTGTG-ELYTWGWGKYGQLGHKDTTSLDRPCRV 283
Score = 85 (35.0 bits), Expect = 1.8e-05, Sum P(2) = 1.8e-05
Identities = 33/123 (26%), Positives = 52/123 (42%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP ++ ++ G +L +D AG ++ WG G SL + P + G
Sbjct: 92 APELRARRLELGAEHALLLDEAGQVFSWGQ---GRHGQLGHGSLEAEPEPRLLEALQGLP 148
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR----ESRLRPKIIETF 184
V +VA G H V + G+ Y WG N +GQL L R +++ P+
Sbjct: 149 VAEVAAGGWHSVCVSETGDIY--------IWGWNESGQLALPSRSLAEDTKTIPREASGL 200
Query: 185 NQD 187
N+D
Sbjct: 201 NED 203
Score = 81 (33.6 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQY 250
V + +CGS HTA++T +T+G G+ GQLGH T S P +V+ + +
Sbjct: 239 VVKASCGSRHTAVVTGTGE--------LYTWGWGKYGQLGHKDTTSLDRPCRVEYFVDKQ 290
Query: 251 VYLVSVDCGLFHTSV 265
+ + +V CG ++T V
Sbjct: 291 LQVRAVSCGPWNTYV 305
Score = 77 (32.2 bits), Expect = 3.3e-06, Sum P(2) = 3.3e-06
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-G-LGLCPNASLTR 291
+LP +V CG HT+VV+ G++++WG K G LG SL R
Sbjct: 232 DLPLGADVVKASCGSRHTAVVTGTGELYTWGWGKYGQLGHKDTTSLDR 279
>MGI|MGI:2137600 [details] [associations]
symbol:Wbscr16 "Williams-Beuren syndrome chromosome region
16 homolog (human)" species:10090 "Mus musculus" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=NAS]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0050790 "regulation
of catalytic activity" evidence=NAS] MGI:MGI:2137600
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104312 CTD:81554 HOGENOM:HOG000232125
HOVERGEN:HBG054246 OMA:MVTLAKS OrthoDB:EOG4F1X33 EMBL:AK017733
EMBL:BC024714 EMBL:BC055335 IPI:IPI00111460 RefSeq:NP_291050.1
UniGene:Mm.29508 ProteinModelPortal:Q9CYF5 SMR:Q9CYF5 STRING:Q9CYF5
PhosphoSite:Q9CYF5 PRIDE:Q9CYF5 Ensembl:ENSMUST00000076228
GeneID:94254 KEGG:mmu:94254 InParanoid:Q9CYF5 NextBio:352275
Bgee:Q9CYF5 Genevestigator:Q9CYF5 GermOnline:ENSMUSG00000061979
Uniprot:Q9CYF5
Length = 461
Score = 109 (43.4 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 35/109 (32%), Positives = 51/109 (46%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V CG +V+++ G V+ WG LG P L + I P L G P+ Q
Sbjct: 338 VACGGTGCAVLNAEGHVFVWGYGI-LGKGPK--LLETAIPEMIPPTLF-GLTEFNPEVQV 393
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q+ CG +H +T+ G +L+ WG+ G LG G+ D + P V P
Sbjct: 394 S-QIRCGLSHFAALTNKG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 440
Score = 87 (35.7 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 33/104 (31%), Positives = 48/104 (46%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS--FTPSP----VWDFHG 126
K+ V G SL + + ++ GN +S + G +V ++ S + DF G
Sbjct: 172 KVLQVSCGRAHSLVLTDREGVFSMGN----NSHGQCGRKVVEDEVYSESHKVHRMQDFDG 227
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
VV+V CG +H + L GE Y C WGA+ GQ GLG
Sbjct: 228 Q-VVQVVCGQDHSLFLTDKGEVYS-----C-GWGAD--GQTGLG 262
Score = 83 (34.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 43/151 (28%), Positives = 69/151 (45%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV----DCGLFHTSVVSSAGDVWSW 275
++ G G +GQ G G P ++ V +V V DC L +S+ G V+ W
Sbjct: 249 YSCGWGADGQTGLGHYNITSTPSKLGGDLAGVTVVQVATYGDCCL----ALSADGGVFGW 304
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G + L L AS+T + + + SG G K + QVACG ++ +G+
Sbjct: 305 GNSEYLQL---ASVTDSTQVNVPRCLPFSGVG----KVK---QVACGGTGCAVLNAEGH- 353
Query: 336 LWSWGRGRSGVLGTG-KTIDFFAPAIVLWPP 365
++ WG G +LG G K ++ P ++ PP
Sbjct: 354 VFVWGYG---ILGKGPKLLETAIPEMI--PP 379
>ZFIN|ZDB-GENE-020509-1 [details] [associations]
symbol:nek8 "NIMA (never in mitosis gene a)-related
kinase 8" species:7955 "Danio rerio" [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0016772
"transferase activity, transferring phosphorus-containing groups"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0016740 "transferase activity" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0061326 "renal tubule development" evidence=IMP]
[GO:0072116 "pronephros formation" evidence=IGI] [GO:0072372
"primary cilium" evidence=IDA] [GO:0001947 "heart looping"
evidence=IGI] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-020509-1 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0072372 GO:GO:0001947 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 KO:K08857 EMBL:AF407580
IPI:IPI00770181 RefSeq:NP_620776.1 UniGene:Dr.12587
ProteinModelPortal:Q90XC2 GeneID:171094 KEGG:dre:171094 CTD:284086
HOGENOM:HOG000006908 HOVERGEN:HBG098799 InParanoid:Q90XC2
NextBio:20797120 ArrayExpress:Q90XC2 GO:GO:0072116 GO:GO:0061326
Uniprot:Q90XC2
Length = 697
Score = 152 (58.6 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 62/204 (30%), Positives = 90/204 (44%)
Query: 101 LPDSSTEGGFS-LVSS--FTPSPV-----WDFHGHTVVKVACGSEHVVALVSAGETYK-G 151
+ + T GG S L SS P P+ W T +++ + V+ VS G T K G
Sbjct: 296 ITSTRTRGGLSSLTSSKMMHPLPLFSVYTWGSGISTPLRLPMLNTEVIQ-VSLGRTQKMG 354
Query: 152 ED----LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ-DSPWAVYEVTCGSFHTALLT 206
L+ + + +G+ L +++P+ I F + S + V+CG T LT
Sbjct: 355 VTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQSGVTIKSVSCGDLFTTCLT 414
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
R + TFG G NG LGHG P+ V+ L Y LV V CG H V
Sbjct: 415 DR--------GIIMTFGSGSNGCLGHGNFNDVTQPKIVEALLGYE-LVQVSCGASHVLAV 465
Query: 267 SSAGDVWSWGM-EKG-LGLCPNAS 288
++ +V+SWG + G LGL S
Sbjct: 466 TNEREVFSWGRGDNGRLGLATQDS 489
>UNIPROTKB|F1PBB3 [details] [associations]
symbol:HERC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005622 "intracellular" evidence=IEA]
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0016567 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 SUPFAM:SSF56204
GeneTree:ENSGT00660000095216 OMA:HIFAGTY EMBL:AAEX03016752
EMBL:AAEX03016750 EMBL:AAEX03016751 Ensembl:ENSCAFT00000015531
Uniprot:F1PBB3
Length = 1018
Score = 154 (59.3 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 63/206 (30%), Positives = 93/206 (45%)
Query: 157 YSWGANNNGQLGLGDR--ESRLRPKI--IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+S G N GQLG ++L+ +I +ET + D V+CG H+ + H+ R
Sbjct: 45 HSCGDNGRGQLGQRGAPCSAQLKERIRALETLHVDL------VSCGKEHSLAVCHKGRV- 97
Query: 213 DMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
W G G GQLG G ++ L+P ++K L + + V CG +H+ +S G
Sbjct: 98 -----FAW--GAGSEGQLGTGEFKETNLIPMKIKTLND-IKIKQVSCGHYHSLALSEGGQ 149
Query: 272 VWSWGMEK----GLGL-CPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
V+SWG GLG P+ AS R + D I P+ QVA G AH
Sbjct: 150 VFSWGSNSDGQLGLGKKFPSQASPQRVRSLDGI-PL---------------AQVAAGGAH 193
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ ++ G + WGR +G L K
Sbjct: 194 SFALSLSGTS-FGWGRNNAGQLALHK 218
Score = 149 (57.5 bits), Expect = 8.9e-07, P = 8.9e-07
Identities = 58/199 (29%), Positives = 83/199 (41%)
Query: 104 SSTEGGFSLVSSF----TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSW 159
S+++G L F +P V G + +VA G H AL +G ++ W
Sbjct: 155 SNSDGQLGLGKKFPSQASPQRVRSLDGIPLAQVAAGGAHSFALSLSGTSF--------GW 206
Query: 160 GANNNGQLGLGDRE---SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
G NN GQL L +P I +Y ++CG HT +LT +
Sbjct: 207 GRNNAGQLALHKNNVSGQSYKPYSISALKNLG--VIY-ISCGYEHTVVLTQNGK------ 257
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+TFG GQLGH T P+ V+ + V +DCG +HT + V + G V S+
Sbjct: 258 --VFTFGDNTYGQLGHSPTAEKSGPQLVEGIDGLVS--QIDCGSYHTLAYVYTTGKVVSF 313
Query: 276 GMEKGLGLCPN--ASLTRN 292
G E P +LT N
Sbjct: 314 GREPTCKSSPTHPEALTEN 332
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 45/171 (26%), Positives = 79/171 (46%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQY 250
+ +V+CG +H+ L+ +++G +GQLG G S P++V+ L
Sbjct: 131 IKQVSCGHYHSLALSEG--------GQVFSWGSNSDGQLGLGKKFPSQASPQRVRSLDG- 181
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ L V G H+ +S +G + WG L + + N +G + P IS G
Sbjct: 182 IPLAQVAAGGAHSFALSLSGTSFGWGRNNAGQLALHKN---NVSGQSYKPYSISALKNLG 238
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++CG HTV++T +G K++++G G LG T + P +V
Sbjct: 239 V-----IYISCGYEHTVVLTQNG-KVFTFGDNTYGQLGHSPTAEKSGPQLV 283
Score = 122 (48.0 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 41/153 (26%), Positives = 71/153 (46%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
GAP S + + + + V G SLA+ + G ++ WG T G F +
Sbjct: 59 GAPCSAQLKERIRALETLHVDLVSCGKEHSLAVCHKGRVFAWGAGSEGQLGT-GEFK-ET 116
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-E 173
+ P + + + +V+CG H +AL G+ + SWG+N++GQLGLG +
Sbjct: 117 NLIPMKIKTLNDIKIKQVSCGHYHSLALSEGGQVF--------SWGSNSDGQLGLGKKFP 168
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
S+ P+ + + + P A +V G H+ L+
Sbjct: 169 SQASPQRVRSLD-GIPLA--QVAAGGAHSFALS 198
Score = 72 (30.4 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 36/127 (28%), Positives = 59/127 (46%)
Query: 221 TFGLGEN--GQLG-HGTTQS--ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+FG G N GQL H S + P + L + ++ + CG HT V++ G V+++
Sbjct: 203 SFGWGRNNAGQLALHKNNVSGQSYKPYSISALKN-LGVIYISCGYEHTVVLTQNGKVFTF 261
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
G + G + S T ++G P L+ G +G Q+ CG+ HT+
Sbjct: 262 G-DNTYGQLGH-SPTAEKSG----PQLVEGIDGLVS-------QIDCGSYHTLAYVYTTG 308
Query: 335 KLWSWGR 341
K+ S+GR
Sbjct: 309 KVVSFGR 315
>RGD|1310372 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10116 "Rattus norvegicus" [GO:0001662 "behavioral fear
response" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEP] [GO:0001726 "ruffle" evidence=IEA;ISO]
[GO:0001881 "receptor recycling" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=ISO;ISS] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005769 "early endosome" evidence=ISO;ISS]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005829 "cytosol"
evidence=ISO;ISS] [GO:0006979 "response to oxidative stress"
evidence=IEA;ISO] [GO:0007032 "endosome organization" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular
junction development" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=IEA;ISO] [GO:0008104 "protein localization"
evidence=IEA;ISO] [GO:0008219 "cell death" evidence=IMP]
[GO:0014069 "postsynaptic density" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0016050 "vesicle organization"
evidence=IEA;ISO] [GO:0016197 "endosomal transport"
evidence=IEA;ISO] [GO:0016601 "Rac protein signal transduction"
evidence=IDA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=ISO;ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISO;ISS] [GO:0030027 "lamellipodium" evidence=IEA;ISO]
[GO:0030424 "axon" evidence=IDA] [GO:0030425 "dendrite"
evidence=ISO;ISS;IDA] [GO:0030426 "growth cone" evidence=IDA]
[GO:0030676 "Rac guanyl-nucleotide exchange factor activity"
evidence=ISO;ISS] [GO:0031982 "vesicle" evidence=ISO;ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA;ISO]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO;ISS] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA;ISO] [GO:0042803 "protein
homodimerization activity" evidence=ISO;ISS] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043025 "neuronal cell body"
evidence=IDA] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] [GO:0043234 "protein complex" evidence=ISO;ISS]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=ISO;ISS] [GO:0045860 "positive regulation of protein
kinase activity" evidence=ISO;ISS] [GO:0048812 "neuron projection
morphogenesis" evidence=ISO;ISS] [GO:0051036 "regulation of
endosome size" evidence=ISO;ISS] [GO:0071902 "positive regulation
of protein serine/threonine kinase activity" evidence=ISO]
InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741
PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233 RGD:1310372
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0016020 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0008219 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0016601
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OrthoDB:EOG4FTVZP
GO:GO:0005769 GO:GO:0031982 GO:GO:0017137 GO:GO:0017112
GO:GO:0030676 GO:GO:0001662 GO:GO:0032855 GO:GO:0001881
GO:GO:0051036 GO:GO:0032313 GO:GO:0016050 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:AABR03068212 EMBL:BK005190
IPI:IPI00366955 RefSeq:NP_001013431.1 UniGene:Rn.219733
ProteinModelPortal:P0C5Y8 STRING:P0C5Y8 PhosphoSite:P0C5Y8
Ensembl:ENSRNOT00000035209 GeneID:363235 KEGG:rno:363235
UCSC:RGD:1310372 InParanoid:P0C5Y8 NextBio:682932
Genevestigator:P0C5Y8 Uniprot:P0C5Y8
Length = 1651
Score = 110 (43.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 32/108 (29%), Positives = 55/108 (50%)
Query: 39 GSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW 96
G N+ C + +Q+++ +P S+ D S+T+ ++I + G +LA+ + +W W
Sbjct: 116 GENAAGQCAVANQQYVSEPSPVSISD-SETSPLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 97 GN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
G C L +T F + P V G V++VACG+ H +ALV
Sbjct: 175 GTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQVACGAFHSLALV 217
Score = 98 (39.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L + WT+G G+ GQLGHG L P VK L ++ ++ G H+ +++ V+S
Sbjct: 518 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGSHSLALTAKSQVYS 576
Query: 275 WG 276
WG
Sbjct: 577 WG 578
Score = 97 (39.2 bits), Expect = 6.6e-06, Sum P(2) = 6.6e-06
Identities = 40/149 (26%), Positives = 64/149 (42%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT----- 128
+ +V G S A+ +G ++MWG + VS PSPV T
Sbjct: 93 VVTVATGSFHSGAVTESGVVYMWGENAAGQCAVANQ-QYVSE--PSPVSISDSETSPLLA 149
Query: 129 --VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 185
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 150 VRILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL- 198
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ V +V CG+FH+ L P D+
Sbjct: 199 --AGRVVLQVACGAFHSLALVQCLPPQDL 225
Score = 81 (33.6 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG GQLG GD RL+P ++ + V + G H+ LT +
Sbjct: 523 WTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE---VIHLEAGGSHSLALTAK-------- 571
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCG--LFHTSVVS-SAGDV 272
S +++G GQLGH + VP K + V+ V+ G LF G
Sbjct: 572 SQVYSWGSNTFGQLGHSEFPTT-VPRLSKVSSESGVWSVAAGHGYSLFLVDTEDFQPGLY 630
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+S ++ G +L N +G +P+L+S
Sbjct: 631 YSGRQDRAEG----DTLPENPSGTT-TPVLLS 657
Score = 64 (27.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++W+WG+G+ G LG G + P V
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCV 547
>MGI|MGI:1921268 [details] [associations]
symbol:Als2 "amyotrophic lateral sclerosis 2 (juvenile)"
species:10090 "Mus musculus" [GO:0001662 "behavioral fear response"
evidence=IMP] [GO:0001726 "ruffle" evidence=IDA] [GO:0001881
"receptor recycling" evidence=IMP] [GO:0005085 "guanyl-nucleotide
exchange factor activity" evidence=IEA] [GO:0005089 "Rho
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005097 "Rab GTPase activator activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005769 "early endosome"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0007032 "endosome organization"
evidence=ISO] [GO:0007041 "lysosomal transport" evidence=ISO]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0007528 "neuromuscular
junction development" evidence=IMP] [GO:0007626 "locomotory
behavior" evidence=IMP] [GO:0008104 "protein localization"
evidence=IMP] [GO:0008219 "cell death" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=IDA] [GO:0016020 "membrane"
evidence=ISO] [GO:0016050 "vesicle organization" evidence=IDA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0016601 "Rac
protein signal transduction" evidence=ISO] [GO:0017112 "Rab
guanyl-nucleotide exchange factor activity" evidence=ISO]
[GO:0017137 "Rab GTPase binding" evidence=ISO] [GO:0030027
"lamellipodium" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030425 "dendrite" evidence=ISO] [GO:0030426 "growth cone"
evidence=ISO] [GO:0030675 "Rac GTPase activator activity"
evidence=ISO] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISO] [GO:0031982 "vesicle" evidence=ISO]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IDA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISO] [GO:0035023 "regulation of Rho protein signal
transduction" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043197 "dendritic spine" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISO]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0048812 "neuron projection morphogenesis" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=ISO] [GO:0071902
"positive regulation of protein serine/threonine kinase activity"
evidence=ISO] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS00741 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
MGI:MGI:1921268 INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204
GO:GO:0005829 GO:GO:0043234 GO:GO:0042803 GO:GO:0014069
GO:GO:0008104 GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812 GO:GO:0007626
GO:GO:0035249 GO:GO:0043539 GO:GO:0030027 GO:GO:0016197
GO:GO:0030426 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466548 GO:GO:0001726
eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493
SMART:SM00698 PROSITE:PS51205 GeneTree:ENSGT00600000084242
CTD:57679 HOVERGEN:HBG037320 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GO:GO:0005769 GO:GO:0031982
GO:GO:0017137 GO:GO:0017112 GO:GO:0030676 GO:GO:0001662
GO:GO:0032855 GO:GO:0001881 GO:GO:0051036 GO:GO:0032313
GO:GO:0016050 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 EMBL:AB053307 EMBL:AC153652 EMBL:BC031479
EMBL:BC046828 EMBL:AK014320 IPI:IPI00170364 IPI:IPI00309844
RefSeq:NP_001153420.2 RefSeq:NP_082993.4 RefSeq:NP_666221.1
UniGene:Mm.272078 STRING:Q920R0 PhosphoSite:Q920R0 PaxDb:Q920R0
PRIDE:Q920R0 Ensembl:ENSMUST00000027178 Ensembl:ENSMUST00000163058
GeneID:74018 KEGG:mmu:74018 UCSC:uc007bdm.2 UCSC:uc007bdn.2
HOGENOM:HOG000033908 InParanoid:Q920R0 NextBio:339546
Genevestigator:Q920R0 GermOnline:ENSMUSG00000026024 Uniprot:Q920R0
Length = 1651
Score = 110 (43.8 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 32/108 (29%), Positives = 54/108 (50%)
Query: 39 GSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW 96
G N+ C + +Q++ +P S+ D S+T+ ++I + G +LA+ + +W W
Sbjct: 116 GENAAGQCAVANQQYVPEPSPVSISD-SETSPSLAVRILQLACGEEHTLALSLSREIWAW 174
Query: 97 GN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
G C L +T F + P V G V++VACG+ H +ALV
Sbjct: 175 GTGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQVACGAFHSLALV 217
Score = 98 (39.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L + WT+G G+ GQLGHG L P VK L ++ ++ G H+ +++ V+S
Sbjct: 518 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGSHSLALTAKSQVYS 576
Query: 275 WG 276
WG
Sbjct: 577 WG 578
Score = 93 (37.8 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 38/147 (25%), Positives = 64/147 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+ +V G S A+ +G ++MWG C + + S VS + S
Sbjct: 93 VITVATGSFHSGAVTESGVVYMWGENAAGQCAVANQQYVPEPSPVS-ISDSETSPSLAVR 151
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQD 187
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 ILQLACGEEHTLALSLSREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL--- 198
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ V +V CG+FH+ L P D+
Sbjct: 199 AGRVVLQVACGAFHSLALVQCLPPQDL 225
Score = 82 (33.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 40/152 (26%), Positives = 64/152 (42%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG GQLG GD RL+P ++ + V + G H+ LT +
Sbjct: 523 WTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE---VIHLEAGGSHSLALTAK-------- 571
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSV--DCGLFHTSVVS-SAGDV 272
S +++G GQLGH + VP K + V+ V+ D LF G
Sbjct: 572 SQVYSWGSNTFGQLGHSEFPTT-VPRLSKVSSENGVWSVAAGQDYSLFLVDTEDFQPGLY 630
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+S ++ G +L N +G +P+L+S
Sbjct: 631 YSGRQDRAEG----DTLPENPSGTK-TPVLLS 657
Score = 64 (27.6 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++W+WG+G+ G LG G + P V
Sbjct: 521 EVWTWGKGKEGQLGHGDVLPRLQPLCV 547
>UNIPROTKB|E1BIS5 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104312 CTD:81554 OMA:MVTLAKS
EMBL:DAAA02058190 IPI:IPI00705939 RefSeq:NP_001179275.1
UniGene:Bt.1520 Ensembl:ENSBTAT00000015608 GeneID:513273
KEGG:bta:513273 NextBio:20870790 Uniprot:E1BIS5
Length = 464
Score = 106 (42.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 34/107 (31%), Positives = 49/107 (45%)
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG +V++ G V+ WG LG PN L + I P L G P Q
Sbjct: 343 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LLETALPEMIPPTLF-GLSEFNPGVQVS- 397
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
++ CG +H +T+ G +L+ WG+ G LG G+ D + P V P
Sbjct: 398 RIRCGLSHFAALTNRG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 443
Score = 89 (36.4 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 33/104 (31%), Positives = 50/104 (48%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS--FTPSP----VWDFHG 126
++ V G SL + + ++ GN +S + G +V + ++ S + DF G
Sbjct: 175 RVLQVSCGRAHSLVLTDGEGVFSMGN----NSYGQCGRKVVENEIYSESHRVHRMQDFDG 230
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
VV+VACG +H + L GE Y C WGA+ GQ GLG
Sbjct: 231 Q-VVQVACGQDHSLFLTDQGEVYS-----C-GWGAD--GQTGLG 265
>UNIPROTKB|C9JW69 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00787306
ProteinModelPortal:C9JW69 SMR:C9JW69 STRING:C9JW69
Ensembl:ENST00000411533 ArrayExpress:C9JW69 Bgee:C9JW69
Uniprot:C9JW69
Length = 372
Score = 147 (56.8 bits), Expect = 3.1e-07, P = 3.1e-07
Identities = 70/248 (28%), Positives = 105/248 (42%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ + G +++WG+ D++ G
Sbjct: 116 LGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS--FRDNN--GVIG 171
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG--------- 160
L+ S PV VVKVA G++H+V L + G+ Y L C G
Sbjct: 172 LLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELF 228
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESM 218
AN G+ GL E L PK + ++ S V + CG++ T ++H E
Sbjct: 229 ANRGGRQGL---ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGH 277
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM 277
+ FGL QLG T+S +P+ + V G HT + S G +S G
Sbjct: 278 VYGFGLSNYHQLGTPGTESCFIPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYSLGR 337
Query: 278 -EKG-LGL 283
E G LGL
Sbjct: 338 AEYGRLGL 345
Score = 128 (50.1 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 80/300 (26%), Positives = 119/300 (39%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHT 128
P + +AGGM ++ + +G ++ +G C D G + V S P V +
Sbjct: 83 PEDVVQAEAGGMHTVCLSKSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EK 137
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQ 186
VV+V+ G H AL G + WG+ +NNG +GL E + +
Sbjct: 138 VVQVSAGDSHTAALTDDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQL 187
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--------GTTQSA 238
D P V +V G+ H +LT D+ +T G GE GQLG G Q
Sbjct: 188 DVP--VVKVASGNDHLVMLT---ADGDL-----YTLGCGEQGQLGRVPELFANRGGRQGL 237
Query: 239 ---LVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
LVP+ V + +V CG + T +S G V+ G GL L
Sbjct: 238 ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVY------GFGLSNYHQLGT 291
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P ++ + + K V + G HTV + +G K +S GR G LG G+
Sbjct: 292 PGTESCFIPQNLT-SFKNSTKSW--VGFSGGQHHTVCMDSEG-KAYSLGRAEYGRLGLGE 347
Score = 121 (47.7 bits), Expect = 0.00023, P = 0.00023
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 42 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 97
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 98 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 146
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +TDDG +++ WG R +GV+G
Sbjct: 147 HTAALTDDG-RVFLWGSFRDNNGVIG 171
>RGD|1311697 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10116 "Rattus norvegicus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR002110 InterPro:IPR000210
InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0005737 GO:GO:0051209 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292 OrthoDB:EOG4J6RQ1
GeneTree:ENSGT00700000104160 IPI:IPI00370548
Ensembl:ENSRNOT00000056930 ArrayExpress:D3ZH46 Uniprot:D3ZH46
Length = 1352
Score = 154 (59.3 bits), Expect = 3.6e-07, P = 3.6e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELLDLFSRSRVYVKQVVLC-KFHSVFLSQ--------Q 195
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGHS-CSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 277 MEK--GLGLCPNAS 288
+ LG+ P S
Sbjct: 255 LNTFHQLGIIPPPS 268
>UNIPROTKB|E1BX75 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005543 "phospholipid binding" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0007626 "locomotory behavior" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] [GO:0014069
"postsynaptic density" evidence=IEA] [GO:0016050 "vesicle
organization" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IEA] [GO:0017137 "Rab GTPase binding"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0030676
"Rac guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0031982 "vesicle" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0032855 "positive regulation of
Rac GTPase activity" evidence=IEA] [GO:0035249 "synaptic
transmission, glutamatergic" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0043539 "protein serine/threonine kinase
activator activity" evidence=IEA] [GO:0048812 "neuron projection
morphogenesis" evidence=IEA] [GO:0051036 "regulation of endosome
size" evidence=IEA] InterPro:IPR000219 InterPro:IPR001849
Pfam:PF00621 PROSITE:PS50003 PROSITE:PS50010 SMART:SM00233
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0005543 Gene3D:2.30.29.30 InterPro:IPR011993
GO:GO:0043539 GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 GeneTree:ENSGT00600000084242 OMA:AKPAIDF
GO:GO:0005769 GO:GO:0017112 GO:GO:0030676 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:AADN02019863
IPI:IPI00580588 Ensembl:ENSGALT00000013707 Uniprot:E1BX75
Length = 1651
Score = 105 (42.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 29/107 (27%), Positives = 51/107 (47%)
Query: 39 GSNSLVPCVIEQFLTIGAPDSLE-DDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 97
G+NS C + + P + DS+T+ +++ + G +LA+ + +W WG
Sbjct: 116 GNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVRVLQLACGEEHTLALSLSREIWAWG 175
Query: 98 N-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+ C L +T F + P V G V+++ACG+ H +ALV
Sbjct: 176 SGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQIACGAYHSLALV 217
Score = 102 (41.0 bits), Expect = 3.6e-07, Sum P(2) = 3.6e-07
Identities = 29/97 (29%), Positives = 48/97 (49%)
Query: 185 NQDSPWAVYEVTCGSFHTALLT--HRKRPNDMLESM---CWTFGLGENGQLGHGTTQSAL 239
+Q SP + +V T LT + + +L S+ W++G G++GQLGHG L
Sbjct: 484 SQVSPRLLRKVGRAKMRTVALTPTYSGEADALLPSLRTEVWSWGRGKDGQLGHGDVLPRL 543
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
P VK L ++ + G H+ +++ V+SWG
Sbjct: 544 QPLCVKSLDGKE-VIQLSAGGHHSLALTAKSQVYSWG 579
Score = 90 (36.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 36/140 (25%), Positives = 64/140 (45%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 126
+ +V AG + A+ G ++MWGN C + + E +S SP+
Sbjct: 93 VITVAAGSFHNGAVTEGGVVYMWGNNSSGQCAVANQPYVPEPQPISISDSETSPLLSVR- 151
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 185
V+++ACG EH +AL + E + +WG+ QLGL + +P+ +E
Sbjct: 152 --VLQLACGEEHTLALSLSREIW--------AWGSGC--QLGLITTTFPVTKPQKVEHL- 198
Query: 186 QDSPWAVYEVTCGSFHTALL 205
+ V ++ CG++H+ L
Sbjct: 199 --AGRVVLQIACGAYHSLAL 216
Score = 70 (29.7 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWGRG+ G LG G + P V
Sbjct: 522 EVWSWGRGKDGQLGHGDVLPRLQPLCV 548
>UNIPROTKB|F1NDJ4 [details] [associations]
symbol:RCCD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005886 GO:GO:0005737 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00626 PROSITE:PS50012
GeneTree:ENSGT00700000104312 EMBL:AADN02038799 IPI:IPI00812606
Ensembl:ENSGALT00000038135 OMA:GHKDTSS Uniprot:F1NDJ4
Length = 221
Score = 107 (42.7 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 32/87 (36%), Positives = 47/87 (54%)
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLC 284
+GQLGHG+ +S P V+ L V + +V G +H++ VS GD++ WG E G LGL
Sbjct: 10 HGQLGHGSLESEQQPRLVEALGG-VPMRAVAAGGWHSACVSDGGDLYVWGWNESGQLGL- 67
Query: 285 PNASLTRNEAGDAISPILISGNGPHGP 311
P+ ++ +A D G GP P
Sbjct: 68 PSRAVAEEQAEDEDM-----GAGPEDP 89
Score = 99 (39.9 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 28/74 (37%), Positives = 35/74 (47%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V+CGS H AL GE +WG GQLG GDR S P+ +E +
Sbjct: 118 VAAVSCGSRHTAALTRGGELN--------TWGWGKYGQLGHGDRASCDHPRRVEQLWAEG 169
Query: 189 PWAVYEVTCGSFHT 202
A EV CG ++T
Sbjct: 170 LRA-QEVVCGPWNT 182
Score = 97 (39.2 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 30/76 (39%), Positives = 40/76 (52%)
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQ 249
AV V+CGS HTA LT N T+G G+ GQLGHG S P +V++L +
Sbjct: 117 AVAAVSCGSRHTAALTRGGELN--------TWGWGKYGQLGHGDRASCDHPRRVEQLWAE 168
Query: 250 YVYLVSVDCGLFHTSV 265
+ V CG ++T V
Sbjct: 169 GLRAQEVVCGPWNTYV 184
Score = 75 (31.5 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 27/85 (31%), Positives = 38/85 (44%)
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV--LWPPLTEEFKQDELN 376
V+CG+ HT +T G +L +WG G+ G LG G P V LW E + E+
Sbjct: 121 VSCGSRHTAALTRGG-ELNTWGWGKYGQLGHGDRASCDHPRRVEQLW---AEGLRAQEVV 176
Query: 377 TGGLDDEIKTKDLEGAEERDEKLSS 401
G + + L+ E RD S
Sbjct: 177 CGPWNTYVCV--LQQGEARDSHAPS 199
Score = 64 (27.6 bits), Expect = 8.3e-05, Sum P(2) = 8.3e-05
Identities = 28/65 (43%), Positives = 30/65 (46%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G SL S P V G + VA G H A VS G G DL Y WG N +GQL
Sbjct: 14 GHGSLESEQQPRLVEALGGVPMRAVAAGGWHS-ACVSDG----G-DL--YVWGWNESGQL 65
Query: 168 GLGDR 172
GL R
Sbjct: 66 GLPSR 70
Score = 52 (23.4 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 9/22 (40%), Positives = 14/22 (63%)
Query: 76 SVKAGGMMSLAIDNAGALWMWG 97
+V AGG S + + G L++WG
Sbjct: 37 AVAAGGWHSACVSDGGDLYVWG 58
>UNIPROTKB|Q9N1T2 [details] [associations]
symbol:RPGR "X-linked retinitis pigmentosa GTPase
regulator" species:9615 "Canis lupus familiaris" [GO:0036126 "sperm
flagellum" evidence=ISS] [GO:0036064 "cilium basal body"
evidence=ISS] [GO:0042073 "intraflagellar transport" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0007601 "visual perception"
evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0035085 "cilium axoneme" evidence=IEA] [GO:0050896 "response to
stimulus" evidence=IEA] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005794 GO:GO:0005813 GO:GO:0007601 GO:GO:0050896
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085
GO:GO:0042384 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042073 eggNOG:COG5184 GO:GO:0036064
GO:GO:0036126 EMBL:AF148798 EMBL:AF148799 EMBL:AF148800
EMBL:AF148801 RefSeq:NP_001003126.1 UniGene:Cfa.3592
ProteinModelPortal:Q9N1T2 STRING:Q9N1T2 GeneID:403726
KEGG:cfa:403726 CTD:6103 HOGENOM:HOG000231314 HOVERGEN:HBG026899
InParanoid:Q9N1T2 NextBio:20817229 Uniprot:Q9N1T2
Length = 1003
Score = 152 (58.6 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 60/199 (30%), Positives = 87/199 (43%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WG L ST + V + P V F ACG H + G+ Y
Sbjct: 64 WGQLGLGSKSTVSKPTCVKALKPEKV-KF-------AACGRNHTLVSTEGGKVYAA---- 111
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
G NN GQLGLGD E R +I F S + +++ GS +A LT
Sbjct: 112 ----GGNNEGQLGLGDTEERSTFHLISFFT--SQRKIKQLSAGSNTSAALTEDG------ 159
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W G GQ+G + VP+QV + + + +S CG +H++ V++ G ++++
Sbjct: 160 ELFMW--GDNSEGQIGLENVTNVCVPQQVT-VGKPISWIS--CGYYHSAFVTTEGQLYTF 214
Query: 276 GM-EKG-LGLCPNASLTRN 292
G E G LGL PN L +
Sbjct: 215 GEPECGKLGL-PNQLLVNH 232
Score = 124 (48.7 bits), Expect = 0.00045, P = 0.00045
Identities = 48/159 (30%), Positives = 81/159 (50%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
F G+N GQ+G + VP+QV + + + +S CG +H++ V++ G ++++G E
Sbjct: 162 FMWGDNSEGQIGLENVTNVCVPQQVT-VGKPISWIS--CGYYHSAFVTTEGQLYTFGEPE 218
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL PN L + + I P G VQVACG HTV++T+ ++
Sbjct: 219 CGKLGL-PNQLLVNHRMPQPVPGI------P-GKV----VQVACGGGHTVVLTEKA--VY 264
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 376
++G G+ G LG G + F ++ P E K +++
Sbjct: 265 TFGLGQFGQLGLGTFL--FETSV---PKAIEHIKDQKIS 298
Score = 99 (39.9 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 39/137 (28%), Positives = 59/137 (43%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G V++ P V G +
Sbjct: 141 KIKQLSAGSNTSAALTEDGELFMWGD----NSEGQIGLENVTNVCVPQQVTV--GKPISW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CG H + + G+ Y + C G N QL + R + P I P
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN--QLLVNHRMPQPVPGI--------PGK 244
Query: 192 VYEVTCGSFHTALLTHR 208
V +V CG HT +LT +
Sbjct: 245 VVQVACGGGHTVVLTEK 261
Score = 92 (37.4 bits), Expect = 5.7e-06, Sum P(2) = 5.7e-06
Identities = 38/122 (31%), Positives = 62/122 (50%)
Query: 214 MLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGD 271
+ E +TFGLG+ GQLG GT VP+ ++ + Q + ++ CG HT++++ G
Sbjct: 258 LTEKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQKISFIA--CGENHTALITDMGL 315
Query: 272 VWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHT 326
++++G + GLGL N I P L S + +F VQ V+CG HT
Sbjct: 316 MYTFGDGRHGKLGLGL-------ENSTNQFI-PTLCS----NFLRFI--VQLVSCGGCHT 361
Query: 327 VL 328
++
Sbjct: 362 LV 363
>WB|WBGene00021685 [details] [associations]
symbol:herc-1 species:6239 "Caenorhabditis elegans"
[GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0006464 "cellular
protein modification process" evidence=IEA] [GO:0019915 "lipid
storage" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237 SMART:SM00119
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204 eggNOG:COG5021
GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452 EMBL:FO081800
HSSP:Q05086 RefSeq:NP_490834.1 ProteinModelPortal:Q9BL11 SMR:Q9BL11
STRING:Q9BL11 PaxDb:Q9BL11 EnsemblMetazoa:Y48G8AL.1.1
EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700 KEGG:cel:CELE_Y48G8AL.1
UCSC:Y48G8AL.1 CTD:171700 WormBase:Y48G8AL.1 InParanoid:Q9BL11
OMA:PRELMEL NextBio:872357 Uniprot:Q9BL11
Length = 1019
Score = 152 (58.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V +G +A+D G +++WG +G P PV G +V+V
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGE------QADGR----CIHRPEPVEQLSGVPIVRVL 196
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSPWAV 192
G+ H +AL ++G + +WG NN+G+LG+ D LRP+ ++ +Q V
Sbjct: 197 AGARHCLALSASGAVF--------TWGQNNSGELGIDD----LRPQTSVQHVHQMDGLGV 244
Query: 193 YEVTCGSFHTALLTH 207
E CG HT LLTH
Sbjct: 245 VEAACGDNHTVLLTH 259
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/190 (28%), Positives = 78/190 (41%)
Query: 160 GANNNGQLGLGDRESRLR-P-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
G GQLG+ ES ++ P +II N AV VTCG HT LT +
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTK--------DG 60
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
W+ G +GQLG G+ ++ + G HT V+ G V++WG
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E G LG+ E S G + D VQVA G+ H + + D+G +
Sbjct: 121 NEHGQLGM---------E-----SKFTWQGTPRRVQEINDIVQVASGSNHCIAL-DEGGR 165
Query: 336 LWSWGRGRSG 345
++ WG G
Sbjct: 166 VFVWGEQADG 175
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 225 GENGQLGHGTTQSAL-VPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
GE GQLG ++S + VPE++ P + + SV CG HT ++ G +WS G
Sbjct: 12 GE-GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMD 70
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
G S R E +I P+ + + K +Q++ G +HTV VTDDG ++++WG
Sbjct: 71 -GQLGRGS--RTEGSFSIYPVSWTSSA----KI---IQISAGRSHTVSVTDDG-RVFAWG 119
Query: 341 RGRSGVLG 348
G LG
Sbjct: 120 SNEHGQLG 127
Score = 93 (37.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAIS 299
PE V++L V +V V G H +S++G V++WG N S E G D +
Sbjct: 181 PEPVEQLSG-VPIVRVLAGARHCLALSASGAVFTWGQ--------NNS---GELGIDDLR 228
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P S H V+ ACG HTVL+T G + +S+G G G GK ++
Sbjct: 229 P-QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG-RTFSFGSDALGQCGFGKKVE 281
Score = 91 (37.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 31/134 (23%), Positives = 58/134 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
+ SV G ++ + G +W G+ D G SF+ PV W ++++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNM--DGQLGRGSRTEGSFSIYPVSWTSSAK-IIQI 99
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPWA 191
+ G H V++ G + +WG+N +GQLG+ + + + P+ ++ N
Sbjct: 100 SAGRSHTVSVTDDGRVF--------AWGSNEHGQLGMESKFTWQGTPRRVQEIND----- 146
Query: 192 VYEVTCGSFHTALL 205
+ +V GS H L
Sbjct: 147 IVQVASGSNHCIAL 160
Score = 91 (37.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G +G+LG + + V ++ + +V CG HT +++ G +S+G +
Sbjct: 212 FTWGQNNSGELGIDDLRPQTSVQHVHQMDG-LGVVEAACGDNHTVLLTHCGRTFSFGSD- 269
Query: 280 GLGLCP-NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
LG C + + A+S ++ G H ++A GA HT+ + +
Sbjct: 270 ALGQCGFGKKVEKRTNPTAVSDLI----GSH------VTRIAAGACHTIAICKGAP--YP 317
Query: 339 WGRGRSGVLGTGKTIDFFAP 358
+G SG LG GK + P
Sbjct: 318 FGLNSSGQLGNGKIMTQSTP 337
Score = 80 (33.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKII 181
D G V V CG +H V L G+ + S G+N +GQLG G R E I
Sbjct: 37 DMDGTAVTSVTCGEQHTVFLTKDGKMW--------SVGSNMDGQLGRGSRTEGSFS---I 85
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLT 206
+ S + +++ G HT +T
Sbjct: 86 YPVSWTSSAKIIQISAGRSHTVSVT 110
Score = 78 (32.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + AG ++++ + G ++ WG+ E F+ TP V + + +V+V
Sbjct: 95 KIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQG--TPRRVQEIND--IVQV 150
Query: 133 ACGSEHVVALVSAGETY 149
A GS H +AL G +
Sbjct: 151 ASGSNHCIALDEGGRVF 167
>UNIPROTKB|Q9BL11 [details] [associations]
symbol:herc-1 "Protein HERC-1" species:6239 "Caenorhabditis
elegans" [GO:0042787 "protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IBA]
[GO:0005737 "cytoplasm" evidence=IBA] [GO:0005634 "nucleus"
evidence=IBA] [GO:0004842 "ubiquitin-protein ligase activity"
evidence=IBA] Pfam:PF00632 InterPro:IPR000569 PROSITE:PS50237
SMART:SM00119 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0000003 GO:GO:0019915 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0004842 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042787 SUPFAM:SSF56204
eggNOG:COG5021 GeneTree:ENSGT00660000095216 HOGENOM:HOG000208452
EMBL:FO081800 HSSP:Q05086 RefSeq:NP_490834.1
ProteinModelPortal:Q9BL11 SMR:Q9BL11 STRING:Q9BL11 PaxDb:Q9BL11
EnsemblMetazoa:Y48G8AL.1.1 EnsemblMetazoa:Y48G8AL.1.2 GeneID:171700
KEGG:cel:CELE_Y48G8AL.1 UCSC:Y48G8AL.1 CTD:171700
WormBase:Y48G8AL.1 InParanoid:Q9BL11 OMA:PRELMEL NextBio:872357
Uniprot:Q9BL11
Length = 1019
Score = 152 (58.6 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 42/135 (31%), Positives = 64/135 (47%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V +G +A+D G +++WG +G P PV G +V+V
Sbjct: 147 IVQVASGSNHCIALDEGGRVFVWGE------QADGR----CIHRPEPVEQLSGVPIVRVL 196
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSPWAV 192
G+ H +AL ++G + +WG NN+G+LG+ D LRP+ ++ +Q V
Sbjct: 197 AGARHCLALSASGAVF--------TWGQNNSGELGIDD----LRPQTSVQHVHQMDGLGV 244
Query: 193 YEVTCGSFHTALLTH 207
E CG HT LLTH
Sbjct: 245 VEAACGDNHTVLLTH 259
Score = 139 (54.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 55/190 (28%), Positives = 78/190 (41%)
Query: 160 GANNNGQLGLGDRESRLR-P-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
G GQLG+ ES ++ P +II N AV VTCG HT LT +
Sbjct: 9 GHTGEGQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTK--------DG 60
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
W+ G +GQLG G+ ++ + G HT V+ G V++WG
Sbjct: 61 KMWSVGSNMDGQLGRGSRTEGSFSIYPVSWTSSAKIIQISAGRSHTVSVTDDGRVFAWGS 120
Query: 278 -EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E G LG+ E S G + D VQVA G+ H + + D+G +
Sbjct: 121 NEHGQLGM---------E-----SKFTWQGTPRRVQEINDIVQVASGSNHCIAL-DEGGR 165
Query: 336 LWSWGRGRSG 345
++ WG G
Sbjct: 166 VFVWGEQADG 175
Score = 133 (51.9 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 43/128 (33%), Positives = 65/128 (50%)
Query: 225 GENGQLGHGTTQSAL-VPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
GE GQLG ++S + VPE++ P + + SV CG HT ++ G +WS G
Sbjct: 12 GE-GQLGVRLSESTIQVPERIIGAPNDMDGTAVTSVTCGEQHTVFLTKDGKMWSVGSNMD 70
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
G S R E +I P+ + + K +Q++ G +HTV VTDDG ++++WG
Sbjct: 71 -GQLGRGS--RTEGSFSIYPVSWTSSA----KI---IQISAGRSHTVSVTDDG-RVFAWG 119
Query: 341 RGRSGVLG 348
G LG
Sbjct: 120 SNEHGQLG 127
Score = 93 (37.8 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 38/115 (33%), Positives = 54/115 (46%)
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAIS 299
PE V++L V +V V G H +S++G V++WG N S E G D +
Sbjct: 181 PEPVEQLSG-VPIVRVLAGARHCLALSASGAVFTWGQ--------NNS---GELGIDDLR 228
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P S H V+ ACG HTVL+T G + +S+G G G GK ++
Sbjct: 229 P-QTSVQHVHQMDGLGVVEAACGDNHTVLLTHCG-RTFSFGSDALGQCGFGKKVE 281
Score = 91 (37.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 31/134 (23%), Positives = 58/134 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
+ SV G ++ + G +W G+ D G SF+ PV W ++++
Sbjct: 43 VTSVTCGEQHTVFLTKDGKMWSVGSNM--DGQLGRGSRTEGSFSIYPVSWTSSAK-IIQI 99
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPWA 191
+ G H V++ G + +WG+N +GQLG+ + + + P+ ++ N
Sbjct: 100 SAGRSHTVSVTDDGRVF--------AWGSNEHGQLGMESKFTWQGTPRRVQEIND----- 146
Query: 192 VYEVTCGSFHTALL 205
+ +V GS H L
Sbjct: 147 IVQVASGSNHCIAL 160
Score = 91 (37.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 34/140 (24%), Positives = 62/140 (44%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G +G+LG + + V ++ + +V CG HT +++ G +S+G +
Sbjct: 212 FTWGQNNSGELGIDDLRPQTSVQHVHQMDG-LGVVEAACGDNHTVLLTHCGRTFSFGSD- 269
Query: 280 GLGLCP-NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
LG C + + A+S ++ G H ++A GA HT+ + +
Sbjct: 270 ALGQCGFGKKVEKRTNPTAVSDLI----GSH------VTRIAAGACHTIAICKGAP--YP 317
Query: 339 WGRGRSGVLGTGKTIDFFAP 358
+G SG LG GK + P
Sbjct: 318 FGLNSSGQLGNGKIMTQSTP 337
Score = 80 (33.2 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 26/85 (30%), Positives = 37/85 (43%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKII 181
D G V V CG +H V L G+ + S G+N +GQLG G R E I
Sbjct: 37 DMDGTAVTSVTCGEQHTVFLTKDGKMW--------SVGSNMDGQLGRGSRTEGSFS---I 85
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLT 206
+ S + +++ G HT +T
Sbjct: 86 YPVSWTSSAKIIQISAGRSHTVSVT 110
Score = 78 (32.5 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 21/77 (27%), Positives = 37/77 (48%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + AG ++++ + G ++ WG+ E F+ TP V + + +V+V
Sbjct: 95 KIIQISAGRSHTVSVTDDGRVFAWGSNEHGQLGMESKFTWQG--TPRRVQEIND--IVQV 150
Query: 133 ACGSEHVVALVSAGETY 149
A GS H +AL G +
Sbjct: 151 ASGSNHCIALDEGGRVF 167
>UNIPROTKB|Q96Q42 [details] [associations]
symbol:ALS2 "Alsin" species:9606 "Homo sapiens" [GO:0005543
"phospholipid binding" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0001881 "receptor recycling"
evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0007626
"locomotory behavior" evidence=IEA] [GO:0008104 "protein
localization" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016050 "vesicle organization"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016601 "Rac protein signal transduction" evidence=IEA]
[GO:0030424 "axon" evidence=IEA] [GO:0032313 "regulation of Rab
GTPase activity" evidence=IEA] [GO:0035249 "synaptic transmission,
glutamatergic" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange factor
activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IGI;NAS]
[GO:0043234 "protein complex" evidence=IDA] [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0017137 "Rab GTPase binding" evidence=NAS;IDA] [GO:0051036
"regulation of endosome size" evidence=IEP] [GO:0032855 "positive
regulation of Rac GTPase activity" evidence=IDA] [GO:0035022
"positive regulation of Rac protein signal transduction"
evidence=IC] [GO:0030425 "dendrite" evidence=IDA] [GO:0048812
"neuron projection morphogenesis" evidence=IDA] [GO:0043539
"protein serine/threonine kinase activator activity" evidence=IDA]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=IDA] [GO:0001726 "ruffle" evidence=ISS] [GO:0030027
"lamellipodium" evidence=ISS] [GO:0005087 "Ran guanyl-nucleotide
exchange factor activity" evidence=NAS] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0030426 "growth cone" evidence=ISS] [GO:0005813 "centrosome"
evidence=IDA] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=IDA] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 EMBL:AB053305 EMBL:AB053306
INTERPRO:IPR000408 Pfam:PF00415 Pfam:PF02204 GO:GO:0005829
GO:GO:0005813 GO:GO:0043234 GO:GO:0014069 GO:GO:0008104
GO:GO:0006979 GO:GO:0016020 GO:GO:0005543 Gene3D:2.30.29.30
InterPro:IPR011993 GO:GO:0008219 EMBL:CH471063 GO:GO:0030424
GO:GO:0043025 GO:GO:0030425 GO:GO:0007528 GO:GO:0001701
GO:GO:0048812 GO:GO:0007626 GO:GO:0035249 GO:GO:0043539
GO:GO:0030027 GO:GO:0016197 GO:GO:0030426 Gene3D:1.20.900.10
SUPFAM:SSF48065 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 GO:GO:0007409 GO:GO:0001726 GO:GO:0016601
GO:GO:0007032 eggNOG:COG4642 InterPro:IPR003409 InterPro:IPR003123
Pfam:PF02493 SMART:SM00698 PROSITE:PS51205 EMBL:AF391100
EMBL:AB046783 EMBL:AK023024 EMBL:AC007242 EMBL:AC007279
EMBL:BC029174 IPI:IPI00242146 IPI:IPI00295004 IPI:IPI00295005
RefSeq:NP_001129217.1 RefSeq:NP_065970.2 UniGene:Hs.471096
UniGene:Hs.621812 ProteinModelPortal:Q96Q42 SMR:Q96Q42
MINT:MINT-1632128 STRING:Q96Q42 PhosphoSite:Q96Q42 DMDM:296434394
PaxDb:Q96Q42 PRIDE:Q96Q42 Ensembl:ENST00000264276
Ensembl:ENST00000467448 GeneID:57679 KEGG:hsa:57679 UCSC:uc002uyo.3
UCSC:uc002uyq.3 UCSC:uc002uyr.3 CTD:57679 GeneCards:GC02M202564
H-InvDB:HIX0200249 HGNC:HGNC:443 HPA:HPA046588 MIM:205100
MIM:606352 MIM:606353 MIM:607225 neXtProt:NX_Q96Q42 Orphanet:803
Orphanet:293168 Orphanet:300605 Orphanet:247604 PharmGKB:PA24732
HOVERGEN:HBG037320 InParanoid:Q96Q42 KO:K04575 OMA:AKPAIDF
OrthoDB:EOG4FTVZP ChiTaRS:ALS2 GenomeRNAi:57679 NextBio:64490
ArrayExpress:Q96Q42 Bgee:Q96Q42 CleanEx:HS_ALS2
Genevestigator:Q96Q42 GermOnline:ENSG00000003393 GO:GO:0005769
GO:GO:0031982 GO:GO:0017137 GO:GO:0017112 GO:GO:0030676
GO:GO:0005087 GO:GO:0001662 GO:GO:0032855 GO:GO:0035022
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
Uniprot:Q96Q42
Length = 1657
Score = 103 (41.3 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L + WT+G G+ GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 524 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 582
Query: 275 WG 276
WG
Sbjct: 583 WG 584
Score = 103 (41.3 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 39 GSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW 96
G NS C + +Q++ P S+ D S+ + ++I + G +LA+ + +W W
Sbjct: 116 GENSAGQCAVANQQYVPEPNPVSIAD-SEASPLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 97 GN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
G C L +T F + P V G V++VACG+ H +ALV
Sbjct: 175 GTGCQLGLITT--AFPVTK---PQKVEHLAGRVVLQVACGAFHSLALV 217
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 126
+ +V G S A+ + G +MWG C + + E ++ SP+
Sbjct: 93 VITVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVR- 151
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 185
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 --ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTAFPVTKPQKVEHL- 198
Query: 186 QDSPWAVYEVTCGSFHTALL 205
+ V +V CG+FH+ L
Sbjct: 199 --AGRVVLQVACGAFHSLAL 216
>UNIPROTKB|Q5BIW4 [details] [associations]
symbol:ALS2 "Alsin" species:9598 "Pan troglodytes"
[GO:0001662 "behavioral fear response" evidence=ISS] [GO:0001726
"ruffle" evidence=ISS] [GO:0001881 "receptor recycling"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005769
"early endosome" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0007528 "neuromuscular junction development" evidence=ISS]
[GO:0007626 "locomotory behavior" evidence=ISS] [GO:0008104
"protein localization" evidence=ISS] [GO:0014069 "postsynaptic
density" evidence=ISS] [GO:0016050 "vesicle organization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0017112 "Rab guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0017137 "Rab GTPase binding" evidence=ISS]
[GO:0030027 "lamellipodium" evidence=ISS] [GO:0030425 "dendrite"
evidence=ISS] [GO:0030676 "Rac guanyl-nucleotide exchange factor
activity" evidence=ISS] [GO:0031982 "vesicle" evidence=ISS]
[GO:0032313 "regulation of Rab GTPase activity" evidence=ISS]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=ISS] [GO:0035249 "synaptic transmission, glutamatergic"
evidence=ISS] [GO:0042803 "protein homodimerization activity"
evidence=ISS] [GO:0043197 "dendritic spine" evidence=ISS]
[GO:0043234 "protein complex" evidence=ISS] [GO:0043539 "protein
serine/threonine kinase activator activity" evidence=ISS]
[GO:0045860 "positive regulation of protein kinase activity"
evidence=ISS] [GO:0048812 "neuron projection morphogenesis"
evidence=ISS] [GO:0051036 "regulation of endosome size"
evidence=ISS] [GO:0071902 "positive regulation of protein
serine/threonine kinase activity" evidence=ISS] [GO:0005813
"centrosome" evidence=ISS] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=ISS] InterPro:IPR000219
InterPro:IPR001849 Pfam:PF00621 PROSITE:PS00741 PROSITE:PS50003
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0043234 GO:GO:0042803
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0030027
GO:GO:0016197 Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0001726 eggNOG:COG4642
InterPro:IPR003409 InterPro:IPR003123 Pfam:PF02493 SMART:SM00698
PROSITE:PS51205 CTD:57679 HOVERGEN:HBG037320 KO:K04575
OrthoDB:EOG4FTVZP GO:GO:0005769 GO:GO:0031982 GO:GO:0017137
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOGENOM:HOG000033908 EMBL:BK005194 RefSeq:NP_001073389.1
UniGene:Ptr.813 ProteinModelPortal:Q5BIW4 STRING:Q5BIW4
PRIDE:Q5BIW4 GeneID:470613 KEGG:ptr:470613 InParanoid:Q5BIW4
NextBio:20847741 Uniprot:Q5BIW4
Length = 1657
Score = 103 (41.3 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L + WT+G G+ GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 524 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 582
Query: 275 WG 276
WG
Sbjct: 583 WG 584
Score = 103 (41.3 bits), Expect = 4.7e-07, Sum P(2) = 4.7e-07
Identities = 32/108 (29%), Positives = 52/108 (48%)
Query: 39 GSNSLVPCVI--EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW 96
G NS C + +Q++ P S+ D S+ + ++I + G +LA+ + +W W
Sbjct: 116 GENSAGQCAVANQQYVPEPNPVSIAD-SEASPLLAVRILQLACGEEHTLALSISREIWAW 174
Query: 97 GN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
G C L +T F + P V G V++VACG+ H +ALV
Sbjct: 175 GTGCQLGLITT--AFPVTK---PQKVEHLAGRVVLQVACGAFHSLALV 217
Score = 80 (33.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 35/140 (25%), Positives = 61/140 (43%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 126
+ +V G S A+ + G +MWG C + + E ++ SP+
Sbjct: 93 VVTVATGSFHSGAVTDNGVAYMWGENSAGQCAVANQQYVPEPNPVSIADSEASPLLAVR- 151
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 185
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 152 --ILQLACGEEHTLALSISREIW--------AWGTGC--QLGLITTAFPVTKPQKVEHL- 198
Query: 186 QDSPWAVYEVTCGSFHTALL 205
+ V +V CG+FH+ L
Sbjct: 199 --AGRVVLQVACGAFHSLAL 216
>UNIPROTKB|E9PDR5 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964822
ProteinModelPortal:E9PDR5 SMR:E9PDR5 Ensembl:ENST00000503631
UCSC:uc011dyw.1 ArrayExpress:E9PDR5 Bgee:E9PDR5 Uniprot:E9PDR5
Length = 1152
Score = 152 (58.6 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 277 ME--KGLGLCPNAS 288
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
>UNIPROTKB|E7EPI0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 Gene3D:3.30.710.10
InterPro:IPR011333 SUPFAM:SSF54695 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 EMBL:AL050333
HGNC:HGNC:17853 ChiTaRS:IBTK IPI:IPI00964356
ProteinModelPortal:E7EPI0 SMR:E7EPI0 Ensembl:ENST00000510291
UCSC:uc011dyv.1 ArrayExpress:E7EPI0 Bgee:E7EPI0 Uniprot:E7EPI0
Length = 1338
Score = 152 (58.6 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 277 ME--KGLGLCPNAS 288
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
>TAIR|locus:2156233 [details] [associations]
symbol:RUG2 "RCC1/UVR8/GEF-like 2" species:3702
"Arabidopsis thaliana" [GO:0005794 "Golgi apparatus" evidence=ISM]
[GO:0008150 "biological_process" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:CP002688 GenomeReviews:BA000015_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
HSSP:P18754 EMBL:BT005508 EMBL:AK117526 IPI:IPI00527447
RefSeq:NP_199644.2 UniGene:At.29855 ProteinModelPortal:Q8GYL6
SMR:Q8GYL6 PRIDE:Q8GYL6 EnsemblPlants:AT5G48330.1 GeneID:834886
KEGG:ath:AT5G48330 TAIR:At5g48330 HOGENOM:HOG000238877
InParanoid:Q8GYL6 OMA:SAGHYHS PhylomeDB:Q8GYL6
ProtClustDB:CLSN2680477 ArrayExpress:Q8GYL6 Genevestigator:Q8GYL6
Uniprot:Q8GYL6
Length = 455
Score = 146 (56.5 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 84/370 (22%), Positives = 146/370 (39%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
Y SL G++ G N + + + + DS + + + + + A G++
Sbjct: 92 YHSLAVTSSGEIWAWGRND--EGQLGRIVIDSSRDSRSEPKRVEGLENVNVQAAFASGVV 149
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S AI + G+LW+WG G ++ + PS V + VVKV+ G H +AL
Sbjct: 150 SAAIGDDGSLWVWGRSKRGQLGLGNG--IIEARVPSRVENLAAEHVVKVSLGWGHALALT 207
Query: 144 SAGETYKGEDLVCYSWGANNNGQLG-LG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
G+ + WG +G++G +G E+ L I + + A ++ +
Sbjct: 208 VDGKVF--------GWGYVADGRVGNVGLPLEASLLDSITDG-SMKGHHAAGDLNLEAAE 258
Query: 202 TALLTHRKRPNDM--------LESMC----WTFGLGENGQL--GH-GTTQSA--LVPEQV 244
++ + NDM +E C G + L H GT SA + Q+
Sbjct: 259 KKVVEAMSKENDMPIAWEPCLVEETCNEKVADIACGSDHSLILCHDGTLLSAGSNIYGQL 318
Query: 245 KELPQYVYL---------VSVDCGLFHTSVVSSAGD----VWSWGMEKGLGLCPNASLTR 291
Q + + +S+ GL H+ + + G+ W W + LG +L R
Sbjct: 319 GRSKQDLGMKPVDITESPISIAAGLGHSLAICNRGERNILSWGWNRSRQLGRGKPENLPR 378
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
G G + P V+ G H++ VT+ G + W WG G++G LG G
Sbjct: 379 EVEG-------FDG--------ESPASVSAGRVHSLCVTEKG-EAWVWGCGKNGRLGLGS 422
Query: 352 TIDFFAPAIV 361
+ D P ++
Sbjct: 423 SSDEPEPMLL 432
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 44/141 (31%), Positives = 63/141 (44%)
Query: 221 TFGLGENGQLG------HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+FG G G LG G A P V LP + S+ G +H+ V+S+G++W+
Sbjct: 48 SFGDGNLGALGLSSSSIPGMGMDAYEPTVVSNLPSDIS--SISAGHYHSLAVTSSGEIWA 105
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG ++G LG S +R+ + P + G Q A G + + DD
Sbjct: 106 WGRNDEGQLGRIVIDS-SRDSRSE---PKRVEGL--ENVNVQ--AAFASGVV-SAAIGDD 156
Query: 333 GYKLWSWGRGRSGVLGTGKTI 353
G LW WGR + G LG G I
Sbjct: 157 G-SLWVWGRSKRGQLGLGNGI 176
>UNIPROTKB|Q9P2D0 [details] [associations]
symbol:IBTK "Inhibitor of Bruton tyrosine kinase"
species:9606 "Homo sapiens" [GO:0016020 "membrane" evidence=IEA]
[GO:0001933 "negative regulation of protein phosphorylation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0019901
"protein kinase binding" evidence=IDA] [GO:0030292 "protein
tyrosine kinase inhibitor activity" evidence=IDA] [GO:0051209
"release of sequestered calcium ion into cytosol" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=IDA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0019901
GO:GO:0016020 Pathway_Interaction_DB:bcr_5pathway GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GO:GO:0030292 EMBL:DQ005633 EMBL:DQ005634
EMBL:DQ005635 EMBL:AB037838 EMBL:AL050333 EMBL:BC027490
EMBL:BC038244 EMBL:BC042171 EMBL:BC113696 EMBL:BC113698
EMBL:AL050018 EMBL:AF235049 IPI:IPI00792333 IPI:IPI00829736
IPI:IPI00910313 PIR:T08705 RefSeq:NP_056340.2 UniGene:Hs.306425
ProteinModelPortal:Q9P2D0 SMR:Q9P2D0 IntAct:Q9P2D0 MINT:MINT-215747
STRING:Q9P2D0 PhosphoSite:Q9P2D0 DMDM:134034141 PaxDb:Q9P2D0
PRIDE:Q9P2D0 DNASU:25998 Ensembl:ENST00000306270 GeneID:25998
KEGG:hsa:25998 UCSC:uc003pjl.1 UCSC:uc003pjm.2 CTD:25998
GeneCards:GC06M082879 HGNC:HGNC:17853 HPA:HPA023826 MIM:606457
neXtProt:NX_Q9P2D0 PharmGKB:PA134898277 HOVERGEN:HBG081779
InParanoid:Q9P2D0 OMA:VSALHHK OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK
GenomeRNAi:25998 NextBio:47714 ArrayExpress:Q9P2D0 Bgee:Q9P2D0
Genevestigator:Q9P2D0 Uniprot:Q9P2D0
Length = 1353
Score = 152 (58.6 bits), Expect = 5.9e-07, P = 5.9e-07
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 277 ME--KGLGLCPNAS 288
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
>UNIPROTKB|F1MDF3 [details] [associations]
symbol:ALS2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051036 "regulation of endosome size" evidence=IEA]
[GO:0048812 "neuron projection morphogenesis" evidence=IEA]
[GO:0043539 "protein serine/threonine kinase activator activity"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0035249 "synaptic transmission, glutamatergic" evidence=IEA]
[GO:0032855 "positive regulation of Rac GTPase activity"
evidence=IEA] [GO:0032313 "regulation of Rab GTPase activity"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0030676 "Rac
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0017137 "Rab GTPase
binding" evidence=IEA] [GO:0017112 "Rab guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016050 "vesicle organization" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0008104
"protein localization" evidence=IEA] [GO:0007626 "locomotory
behavior" evidence=IEA] [GO:0007528 "neuromuscular junction
development" evidence=IEA] [GO:0006979 "response to oxidative
stress" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005813 "centrosome" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0001881 "receptor recycling" evidence=IEA]
[GO:0001726 "ruffle" evidence=IEA] [GO:0001662 "behavioral fear
response" evidence=IEA] [GO:0005543 "phospholipid binding"
evidence=IEA] InterPro:IPR000219 InterPro:IPR001849 Pfam:PF00621
PROSITE:PS50010 SMART:SM00233 INTERPRO:IPR000408 Pfam:PF00415
Pfam:PF02204 GO:GO:0005829 GO:GO:0005813 GO:GO:0043234
GO:GO:0014069 GO:GO:0008104 GO:GO:0006979 GO:GO:0005543
Gene3D:2.30.29.30 InterPro:IPR011993 GO:GO:0007528 GO:GO:0048812
GO:GO:0007626 GO:GO:0035249 GO:GO:0043539 GO:GO:0016197
Gene3D:1.20.900.10 SUPFAM:SSF48065 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 InterPro:IPR003409
InterPro:IPR003123 Pfam:PF02493 SMART:SM00698 PROSITE:PS51205
GeneTree:ENSGT00600000084242 OMA:AKPAIDF GO:GO:0005769
GO:GO:0017112 GO:GO:0030676 GO:GO:0001662 GO:GO:0032855
GO:GO:0001881 GO:GO:0051036 GO:GO:0032313 GO:GO:0016050
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 EMBL:DAAA02005594
EMBL:DAAA02005595 EMBL:DAAA02005596 IPI:IPI00905690
Ensembl:ENSBTAT00000060956 Uniprot:F1MDF3
Length = 1661
Score = 119 (46.9 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 45/161 (27%), Positives = 72/161 (44%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQLGHGTTQSALVPEQVKELPQY 250
V G H LLT +P+D ++FG L + + ++ + + QY
Sbjct: 43 VLHAALGVKHGVLLTEVFKPSD---GEVYSFGTLPWRSEPAETCPSNPILESAL--VGQY 97
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V V+V G FHT V+ +G V+ WG E G C ++ +P+ IS +
Sbjct: 98 V--VTVATGSFHTGAVTDSGVVYMWG-ENSAGQC---AVANQPYVPEPNPVSIS-DSETS 150
Query: 311 PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRG-RSGVLGT 349
P + Q+ACG HT L ++W+WG G + G++ T
Sbjct: 151 PLLAVRILQLACGEEHT-LALSLSREIWAWGTGCQLGLITT 190
Score = 105 (42.0 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 31/107 (28%), Positives = 50/107 (46%)
Query: 39 GSNSLVPCVIEQFLTIGAPDSLE-DDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 97
G NS C + + P+ + DS+T+ ++I + G +LA+ + +W WG
Sbjct: 121 GENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVRILQLACGEEHTLALSLSREIWAWG 180
Query: 98 N-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
C L +T F + P V G V++VACG+ H +ALV
Sbjct: 181 TGCQLGLITTT--FPVTK---PQKVEHLAGRVVLQVACGAFHSLALV 222
Score = 103 (41.3 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 22/62 (35%), Positives = 35/62 (56%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L + WT+G G+ GQLGHG L P VK L ++ ++ G +H+ +++ V+S
Sbjct: 528 LRTEVWTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE-VIHLEAGGYHSLALTAKSQVYS 586
Query: 275 WG 276
WG
Sbjct: 587 WG 588
Score = 87 (35.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG GQLG GD RL+P ++ + V + G +H+ LT +
Sbjct: 533 WTWGKGKEGQLGHGDVLPRLQPLCVKCLDGKE---VIHLEAGGYHSLALTAK-------- 581
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVK 245
S +++G GQLGH + VP K
Sbjct: 582 SQVYSWGSNTFGQLGHSDFPTT-VPRLAK 609
Score = 84 (34.6 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 35/140 (25%), Positives = 63/140 (45%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-----CPLPDSS--TEGGFSLVSSFTPSPVWDFHG 126
+ +V G + A+ ++G ++MWG C + + E +S SP+
Sbjct: 98 VVTVATGSFHTGAVTDSGVVYMWGENSAGQCAVANQPYVPEPNPVSISDSETSPLLAVR- 156
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFN 185
++++ACG EH +AL + E + +WG QLGL + +P+ +E
Sbjct: 157 --ILQLACGEEHTLALSLSREIW--------AWGTGC--QLGLITTTFPVTKPQKVEHL- 203
Query: 186 QDSPWAVYEVTCGSFHTALL 205
+ V +V CG+FH+ L
Sbjct: 204 --AGRVVLQVACGAFHSLAL 221
Score = 64 (27.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++W+WG+G+ G LG G + P V
Sbjct: 531 EVWTWGKGKEGQLGHGDVLPRLQPLCV 557
Score = 41 (19.5 bits), Expect = 8.4e-07, Sum P(3) = 8.4e-07
Identities = 10/33 (30%), Positives = 16/33 (48%)
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
T Q+ P A E+ G+ TA + P D++
Sbjct: 298 TLVQNEPPAATELNVGNVQTASVQTTSFPQDIM 330
>RGD|1307187 [details] [associations]
symbol:Nek9 "NIMA-related kinase 9" species:10116 "Rattus
norvegicus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108 PROSITE:PS50011
SMART:SM00220 RGD:1307187 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 OMA:GCDGTFL OrthoDB:EOG4NZTSM IPI:IPI00870835
Ensembl:ENSRNOT00000009300 UCSC:RGD:1307187 ArrayExpress:D4A4B2
Uniprot:D4A4B2
Length = 975
Score = 150 (57.9 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 74/294 (25%), Positives = 118/294 (40%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 130
I V G ++ + + G L+ +G+ D G VS P + F + V
Sbjct: 426 IHQVSCGDDFTVCVTDEGQLYAFGS----DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE 481
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 482 QVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQRVDV---PKAL 530
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELP- 248
+ V CG T LLT + +L C GL E +LG S ++ E E+P
Sbjct: 531 IIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHEAYHEVPY 582
Query: 249 ----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+ + ++ G HT+ + G + ++G K C + + I
Sbjct: 583 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGNYKKRLGI 638
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ + GP G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 639 NLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 685
Score = 130 (50.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 371 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 426
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG T V+ G ++++G + G C + + + + P+ ++
Sbjct: 427 HQVSCGDDFTVCVTDEGQLYAFGSDY-YG-C--MGVDKVSGPEVLEPMQLNFF------L 476
Query: 314 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 477 SNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 521
Score = 46 (21.3 bits), Expect = 9.3e-07, Sum P(2) = 9.3e-07
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + T P+ Y S C + F V CVI + LT+ D+ TN
Sbjct: 203 YSMAETLVGTPY--YMSPELCQGVKYNFKSDIWAVGCVIFELLTL----KRTFDA-TN-- 253
Query: 70 APIKICSVKAGGMMSLAIDNA 90
P+ +C G+ ++ +D++
Sbjct: 254 -PLNLCVKIVQGIRAMEVDSS 273
>MGI|MGI:2387995 [details] [associations]
symbol:Nek9 "NIMA (never in mitosis gene a)-related
expressed kinase 9" species:10090 "Mus musculus" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0004672 "protein kinase
activity" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0016740
"transferase activity" evidence=IEA] [GO:0016772 "transferase
activity, transferring phosphorus-containing groups" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 MGI:MGI:2387995
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0019901 GO:GO:0051301 GO:GO:0007067
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:CH466590
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 HOVERGEN:HBG039572
OMA:GCDGTFL OrthoDB:EOG4NZTSM EMBL:AJ489828 EMBL:BC024926
EMBL:BC117971 EMBL:BC117972 IPI:IPI00169806 RefSeq:NP_660120.2
UniGene:Mm.29071 ProteinModelPortal:Q8K1R7 SMR:Q8K1R7
DIP:DIP-56880N IntAct:Q8K1R7 STRING:Q8K1R7 PhosphoSite:Q8K1R7
PaxDb:Q8K1R7 PRIDE:Q8K1R7 Ensembl:ENSMUST00000040992 GeneID:217718
KEGG:mmu:217718 InParanoid:Q148U2 NextBio:375996 Bgee:Q8K1R7
Genevestigator:Q8K1R7 GermOnline:ENSMUSG00000034290 Uniprot:Q8K1R7
Length = 984
Score = 150 (57.9 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 74/294 (25%), Positives = 118/294 (40%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 130
I V G ++ + + G L+ +G+ D G VS P + F + V
Sbjct: 428 IHQVSCGDDFTVCVTDEGQLYAFGS----DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE 483
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 484 QVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQRVDV---PKAL 532
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELP- 248
+ V CG T LLT + +L C GL E +LG S ++ E E+P
Sbjct: 533 IIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHEAYHEVPY 584
Query: 249 ----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+ + ++ G HT+ + G + ++G K C + + I
Sbjct: 585 TTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGNYKKRLGI 640
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ + GP G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 641 NLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 687
Score = 130 (50.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 46/166 (27%), Positives = 81/166 (48%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 373 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 428
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG T V+ G ++++G + G C + + + + P+ ++
Sbjct: 429 HQVSCGDDFTVCVTDEGQLYAFGSDY-YG-C--MGVDKVSGPEVLEPMQLNFF------L 478
Query: 314 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 479 SNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 46 (21.3 bits), Expect = 9.5e-07, Sum P(2) = 9.5e-07
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + T P+ Y S C + F V CVI + LT+ D+ TN
Sbjct: 205 YSMAETLVGTPY--YMSPELCQGVKYNFKSDIWAVGCVIFELLTL----KRTFDA-TN-- 255
Query: 70 APIKICSVKAGGMMSLAIDNA 90
P+ +C G+ ++ +D++
Sbjct: 256 -PLNLCVKIVQGIRAMEVDSS 275
>UNIPROTKB|Q7ZZC8 [details] [associations]
symbol:nek9 "Serine/threonine-protein kinase Nek9"
species:8355 "Xenopus laevis" [GO:0019901 "protein kinase binding"
evidence=ISS] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005524 GO:GO:0005737 GO:GO:0019901
GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
HOVERGEN:HBG039572 EMBL:AY271412 UniGene:Xl.77246
ProteinModelPortal:Q7ZZC8 Xenbase:XB-GENE-974105 Uniprot:Q7ZZC8
Length = 944
Score = 147 (56.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 49/182 (26%), Positives = 85/182 (46%)
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+ ++ F W +V G H A++T K ++ + G +GQLGHG S
Sbjct: 341 PQKLDVFK--GGWRARQVCAGDAHFAVVTVEK---ELYTWVNMQGGSKLHGQLGHGDRAS 395
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
P+ V++L Q + V CG T ++ G ++S+G + G C + ++ +
Sbjct: 396 YRQPKHVEKL-QGKSVQKVSCGSDFTVCITDEGQLYSFGSDY-YG-C--LGVNQSAGSEV 450
Query: 298 ISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ P+L+ +PV QV+CG +H + +T ++SWG G G LG D +
Sbjct: 451 LEPLLVDFF------LNEPVDQVSCGDSHIMALTRSK-SVYSWGCGEYGRLGLDSEDDVY 503
Query: 357 AP 358
+P
Sbjct: 504 SP 505
Score = 139 (54.0 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 74/289 (25%), Positives = 116/289 (40%)
Query: 77 VKAGGMMSLAIDNAGALWMWGN----CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
V G ++ I + G L+ +G+ C L + + G L P V F V +V
Sbjct: 413 VSCGSDFTVCITDEGQLYSFGSDYYGC-LGVNQSAGSEVL----EPLLVDFFLNEPVDQV 467
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG H++AL + Y SWG G+LGL + P+ +E +
Sbjct: 468 SCGDSHIMALTRSKSVY--------SWGCGEYGRLGLDSEDDVYSPQKVEV---QRGLCI 516
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELPQYV 251
V CGS + LLT L GL E+ +LG + ++ E +E+P
Sbjct: 517 VNVCCGSDGSFLLT--------LTGKVLACGLNEHNKLGLNQYTAGIINHEAFQEVPYTT 568
Query: 252 YLV-----------SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT--RNEAGDAI 298
L S+ G HT+ + G + ++G K C + R G
Sbjct: 569 SLTLAKQLSFYKIRSISPGRTHTAAIDERGRLLTFGSNK----CGQLGVGDYRKHLG--- 621
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
I + G GP G K ++V+CG T T D + +++WG G +G L
Sbjct: 622 --INLLG-GPLGGK--QVIRVSCGDEFTTAATADNH-IFAWGNGGNGRL 664
Score = 135 (52.6 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 53/199 (26%), Positives = 93/199 (46%)
Query: 157 YSWGANNNGQLGLGDRESR--LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
YS+G++ G LG+ L P +++ F + P V +V+CG H LT K
Sbjct: 430 YSFGSDYYGCLGVNQSAGSEVLEPLLVDFFLNE-P--VDQVSCGDSHIMALTRSKS---- 482
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G GE G+LG + P++V E+ + + +V+V CG + +++ G V +
Sbjct: 483 ----VYSWGCGEYGRLGLDSEDDVYSPQKV-EVQRGLCIVNVCCGSDGSFLLTLTGKVLA 537
Query: 275 WGMEKG--LGLCP-NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
G+ + LGL A + +EA + P S F ++ G HT + +
Sbjct: 538 CGLNEHNKLGLNQYTAGIINHEAFQEV-PYTTSLTLAKQLSFYKIRSISPGRTHTAAIDE 596
Query: 332 DGYKLWSWGRGRSGVLGTG 350
G +L ++G + G LG G
Sbjct: 597 RG-RLLTFGSNKCGQLGVG 614
Score = 120 (47.3 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 52/173 (30%), Positives = 74/173 (42%)
Query: 117 TPSPVWDFHGHTVVKVAC-GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
TP + F G + C G H + E Y ++ G+ +GQLG GDR S
Sbjct: 340 TPQKLDVFKGGWRARQVCAGDAHFAVVTVEKELYTWVNM---QGGSKLHGQLGHGDRASY 396
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+PK +E S V +V+CGS T +T E ++FG G LG +
Sbjct: 397 RQPKHVEKLQGKS---VQKVSCGSDFTVCITD--------EGQLYSFGSDYYGCLGVNQS 445
Query: 236 QSALVPEQVKELPQYVYLVSVD---CGLFHTSVVSSAGDVWSWGM-EKG-LGL 283
+ V E + L + VD CG H ++ + V+SWG E G LGL
Sbjct: 446 AGSEVLEPL--LVDFFLNEPVDQVSCGDSHIMALTRSKSVYSWGCGEYGRLGL 496
Score = 48 (22.0 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 20/80 (25%), Positives = 34/80 (42%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + TC + + Y S C + F V CV+ + LT+ + D+ TN
Sbjct: 187 YSMAETC--VGTLYYMSPEICQGVKYSFKSDIWAVGCVLYELLTL----TRTFDA-TN-- 237
Query: 70 APIKICSVKAGGMMSLAIDN 89
P+ +C G ++ +DN
Sbjct: 238 -PLNLCVKIVQGNWAVGLDN 256
>UNIPROTKB|F1S2Q4 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:CT737372 Ensembl:ENSSSCT00000002648 Uniprot:F1S2Q4
Length = 1004
Score = 150 (57.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 64/241 (26%), Positives = 99/241 (41%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 496 FSNNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 547
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 242
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 548 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 596
Query: 243 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
E+P + + +V G HT+ + G + ++G K C +
Sbjct: 597 AYHEVPYTTSFTLAKQLSFYKIRTVAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGN 652
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 653 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 705
Query: 352 T 352
T
Sbjct: 706 T 706
Score = 129 (50.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 392 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 447
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPHGPK 312
V CG T V+ G ++++G + G C AG + + P+ ++
Sbjct: 448 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-CMGVDKV---AGPEVLEPMQLNFFS----- 497
Query: 313 FQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 498 -NNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 542
Score = 45 (20.9 bits), Expect = 1.3e-06, Sum P(2) = 1.3e-06
Identities = 20/80 (25%), Positives = 33/80 (41%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + T P+ Y S C + F V CVI + LT+ D+ TN
Sbjct: 224 YSMAETLVGTPY--YMSPELCQGVKYNFKSDIWAVGCVIFELLTL----KRTFDA-TN-- 274
Query: 70 APIKICSVKAGGMMSLAIDN 89
P+ +C G+ ++ +D+
Sbjct: 275 -PLNLCVKIVQGIRAMEVDS 293
>UNIPROTKB|F1Q1C6 [details] [associations]
symbol:WBSCR16 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104312 OMA:MVTLAKS EMBL:AAEX03004216
EMBL:AAEX03004217 Ensembl:ENSCAFT00000018027 Uniprot:F1Q1C6
Length = 465
Score = 97 (39.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 33/107 (30%), Positives = 46/107 (42%)
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG +V++ G V+ WG LG PN L + I P L G P
Sbjct: 344 CGGTGCAVLNGEGHVFVWGYGI-LGKGPN--LVETAFPEVIPPTLF-GLTEFNPGVHVS- 398
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+ CG +H +T G +L+ WG+ G LG G+ D + P V P
Sbjct: 399 HIWCGLSHFAALTSKG-ELFVWGKNIRGCLGIGRLEDQYFPWRVTMP 444
Score = 92 (37.4 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 50/182 (27%), Positives = 76/182 (41%)
Query: 109 GFSLVSSFTPSPV-WDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
G+ V +P P+ D T V++V+CG H + L +G +S G N GQ
Sbjct: 155 GYEYVLEPSPVPLPLDRPQETRVLQVSCGRAHSLILTDC----EG----VFSMGNNAYGQ 206
Query: 167 LGLGDRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
G E+ + + + QD V +V CG H+ LT + ++ G G
Sbjct: 207 CGRNVVENEIYSESHKVNRMQDFDGQVVQVVCGQDHSLFLTDKGE--------VYSCGWG 258
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSV----DCGLFHTSVVSSAGDVWSWGMEKGL 281
+GQ G G VP ++ V +V V DC L VS+ G ++ WG + L
Sbjct: 259 ADGQTGLGHYDITSVPTKLGGDLAGVNVVQVATYGDCCL----AVSAEGGLFGWGNSEYL 314
Query: 282 GL 283
L
Sbjct: 315 QL 316
>UNIPROTKB|E2QYP0 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0019901 "protein kinase binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] InterPro:IPR000719
InterPro:IPR002290 InterPro:IPR008271 InterPro:IPR011009
Pfam:PF00069 PROSITE:PS00108 PROSITE:PS50011 SMART:SM00220
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005739 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 KO:K08857
GeneTree:ENSGT00700000104074 CTD:91754 OMA:GCDGTFL
EMBL:AAEX03005855 RefSeq:XP_547912.3 Ensembl:ENSCAFT00000026967
GeneID:490790 KEGG:cfa:490790 NextBio:20863745 Uniprot:E2QYP0
Length = 976
Score = 148 (57.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 477 FLNNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 528
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 242
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 529 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 577
Query: 243 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
E+P + + ++ G HT+ + G + ++G K C +
Sbjct: 578 AYHEIPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGN 633
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 634 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 686
Query: 352 T 352
T
Sbjct: 687 T 687
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 373 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 428
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPHGPK 312
V CG T V+ G ++++G + G C AG + + P+ ++
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-CMGVDKV---AGPEVLEPMQLNFF------ 477
Query: 313 FQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 478 LNNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 46 (21.3 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + T P+ Y S C + F V CVI + LT+ D+ TN
Sbjct: 205 YSMAETLVGTPY--YMSPELCQGVKYNFKSDIWAVGCVIFELLTL----KRTFDA-TN-- 255
Query: 70 APIKICSVKAGGMMSLAIDNA 90
P+ +C G+ ++ +D++
Sbjct: 256 -PLNLCVKIVQGIRAMEVDSS 275
>ASPGD|ASPL0000064315 [details] [associations]
symbol:rcc1 species:162425 "Emericella nidulans"
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0004871 "signal transducer activity" evidence=IEA] [GO:0006406
"mRNA export from nucleus" evidence=IEA] [GO:0006407 "rRNA export
from nucleus" evidence=IEA] [GO:0000054 "ribosomal subunit export
from nucleus" evidence=IEA] [GO:0031291 "Ran protein signal
transduction" evidence=IEA] [GO:0042992 "negative regulation of
transcription factor import into nucleus" evidence=IEA] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IEA]
[GO:0060623 "regulation of chromosome condensation" evidence=IEA]
[GO:0007093 "mitotic cell cycle checkpoint" evidence=IEA]
[GO:0030071 "regulation of mitotic metaphase/anaphase transition"
evidence=IEA] [GO:0032888 "regulation of mitotic spindle
elongation" evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985 EMBL:BN001304
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AACD01000117 eggNOG:COG5184 OMA:PFEAIWA HOGENOM:HOG000170207
OrthoDB:EOG466ZVF RefSeq:XP_664582.1 ProteinModelPortal:Q5AXK2
STRING:Q5AXK2 EnsemblFungi:CADANIAT00000503 GeneID:2870170
KEGG:ani:AN6978.2 Uniprot:Q5AXK2
Length = 533
Score = 143 (55.4 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 81/316 (25%), Positives = 132/316 (41%)
Query: 68 HKAP--IKICSVKAGGMMSLAIDNAGALWMWG---NCPLP-DSSTEGGFSLV-------- 113
H P + + V GGM +A+ + + WG L D++ EGG+ +
Sbjct: 142 HLLPDDVGVVQVAVGGMHCVALTHDNKVLTWGVNDQGALGRDTTWEGGYKDMDNRDSDSD 201
Query: 114 --SSFTPSPVWDFHGHTVVKVACGSE---H--VVALVSAGETYK---GEDLVCYSWGA-- 161
S +P D + H A S H V+ V+AG++ ++ Y WG
Sbjct: 202 SDSDSDDNP--DLNPHECTPTAIPSSAFPHGTVIVEVAAGDSSSFALTDEGQVYGWGTFR 259
Query: 162 NNNGQLGLGDRESRLR--PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
+N+G LG D +++++ PK++ + + + CG H L ND +
Sbjct: 260 SNDGILGF-DAKTKVQTTPKLLPDLKK-----IKHLVCGDNHVLAL------NDKGAVLS 307
Query: 220 WTFGLGENGQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
W G G+ QLG + + L Q +E +V + G FH+ V +G V++WG+
Sbjct: 308 W--GSGQQNQLGRRIIERNKLNGLQPREFGLPKGIVHIGAGAFHSFAVHQSGKVFAWGLN 365
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G + R AGD+ + I + ++ Q+ GA H++ T DG L
Sbjct: 366 S-FG----ETGIRENAGDSEAAI-VHPTVVDSLSKKNVTQICGGAHHSIAATQDGECL-V 418
Query: 339 WGRGRSGVLGTGKTID 354
WGR G TG ID
Sbjct: 419 WGR-LDGYQ-TGLKID 432
Score = 142 (55.0 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 78/300 (26%), Positives = 122/300 (40%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I V AG S A+ + G ++ WG D GF + TP + D +
Sbjct: 233 IVEVAAGDSSSFALTDEGQVYGWGTFRSNDGIL--GFDAKTKVQTTPKLLPDLK--KIKH 288
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ CG HV+AL KG L SWG+ QLG E R + ++ P
Sbjct: 289 LVCGDNHVLALND-----KGAVL---SWGSGQQNQLGRRIIE-RNKLNGLQPREFGLPKG 339
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALV-PEQVKELP 248
+ + G+FH+ H+ + W GE G + G +++A+V P V L
Sbjct: 340 IVHIGAGAFHS-FAVHQSG-----KVFAWGLNSFGETGIRENAGDSEAAIVHPTVVDSLS 393
Query: 249 QYVYLVSVDCGLFHTSVVSSA-GDVWSWGMEKGL--GL----CPNASLTRNEAGDAISPI 301
+ V+ CG H S+ ++ G+ WG G GL P+ ++ ++E D I
Sbjct: 394 KKN--VTQICGGAHHSIAATQDGECLVWGRLDGYQTGLKIDTLPDDAVIKDER-DR-PRI 449
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
LI G K + VA G+ H++ + G + WSWG + G G D ++
Sbjct: 450 LIEPTAVPGIKAK---AVAAGSDHSIAIDTSG-RPWSWGFSATYQTGQGTQDDVEVATVI 505
>UNIPROTKB|I3L8I2 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000025619
Uniprot:I3L8I2
Length = 676
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 79/285 (27%), Positives = 116/285 (40%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ + G SL P+ V G+ +V+
Sbjct: 382 VTIKHVACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQ 438
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ HV+AL + E + +WG + G+LGLG RES P+++
Sbjct: 439 VACGASHVLALSTERELF--------AWGRGDGGRLGLGTRESHCCPQLVP---MPPGQE 487
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALVPEQVKELP- 248
V CG + +LT P L F LG + LG V E V P
Sbjct: 488 AQRVVCGIDSSMILTV---PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPL 544
Query: 249 -----QYVYLVSVDCGLFHTSVVSSA-GDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
L+SVD G H++ V+ A GD +++G NA +P
Sbjct: 545 GSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS--------NARRVSR------APCR 590
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL-WSWG-RGRSG 345
+ G G K VACG A TV + +G W G RGR G
Sbjct: 591 VQGL--QGIKIST---VACGDAFTVAIGAEGEVFSWGKGARGRLG 630
>UNIPROTKB|I3L5B6 [details] [associations]
symbol:LOC100737658 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
InterPro:IPR000719 InterPro:IPR008271 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005524
SUPFAM:SSF56112 GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012
GeneTree:ENSGT00700000104137 Ensembl:ENSSSCT00000029356 OMA:PEREMAM
Uniprot:I3L5B6
Length = 680
Score = 144 (55.7 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 79/285 (27%), Positives = 116/285 (40%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ + G SL P+ V G+ +V+
Sbjct: 386 VTIKHVACGDLFTACLTDRGIIMTFGS---GSNGCLGHGSLNDISQPTIVEALLGYEMVQ 442
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ HV+AL + E + +WG + G+LGLG RES P+++
Sbjct: 443 VACGASHVLALSTERELF--------AWGRGDGGRLGLGTRESHCCPQLVP---MPPGQE 491
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENG-QLGHGTTQSALVPEQVKELP- 248
V CG + +LT P L F LG + LG V E V P
Sbjct: 492 AQRVVCGIDSSMILTV---PGQALACGSNRFNKLGLDPLSLGEEPAPHQQVEEAVTFTPL 548
Query: 249 -----QYVYLVSVDCGLFHTSVVSSA-GDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
L+SVD G H++ V+ A GD +++G NA +P
Sbjct: 549 GSAPLDQEPLLSVDLGTAHSAAVTXASGDCYTFGS--------NARRVSR------APCR 594
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL-WSWG-RGRSG 345
+ G G K VACG A TV + +G W G RGR G
Sbjct: 595 VQGL--QGIKIST---VACGDAFTVAIGAEGEVFSWGKGARGRLG 634
>UNIPROTKB|F1MD33 [details] [associations]
symbol:F1MD33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005929 "cilium" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GeneTree:ENSGT00700000104160 EMBL:DAAA02073693
IPI:IPI00698306 Ensembl:ENSBTAT00000005090 OMA:SAEKHET
Uniprot:F1MD33
Length = 158
Score = 119 (46.9 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 43/132 (32%), Positives = 66/132 (50%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+ G NN GQLGLGD + R +I F S + +++ GS +A LT E
Sbjct: 6 YATGGNNEGQLGLGDTDERSAFHLISFFT--SQHKIKQLSAGSNTSAALT--------AE 55
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSSAGDVWS 274
+TFG E+G+LG LV +V +L + ++ V CG HT V++ V++
Sbjct: 56 GELYTFGEPESGKLG--LPPKLLVNHKVPQLVPGISEKVIQVACGGGHTVVLTEKA-VYT 112
Query: 275 WGM----EKGLG 282
+G+ + GLG
Sbjct: 113 FGLGQFGQLGLG 124
Score = 117 (46.2 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 46/137 (33%), Positives = 60/137 (43%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSPVWDFHGHTVV 130
KI + AG S A+ G L+ +G P+S G LV+ P V V+
Sbjct: 38 KIKQLSAGSNTSAALTAEGELYTFGE---PESGKLGLPPKLLVNHKVPQLVPGI-SEKVI 93
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSP 189
+VACG H V L E V Y++G GQLGLG PK+IE+
Sbjct: 94 QVACGGGHTVVLT--------EKAV-YTFGLGQFGQLGLGTFTFETSEPKVIESVKDKK- 143
Query: 190 WAVYEVTCGSFHTALLT 206
+ V CG HTAL+T
Sbjct: 144 --ISHVCCGENHTALIT 158
Score = 115 (45.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 42/140 (30%), Positives = 68/140 (48%)
Query: 136 SEHVVALVSAGE------TYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQD 187
S+H + +SAG T +GE Y++G +G+LGL + + P+++ ++
Sbjct: 35 SQHKIKQLSAGSNTSAALTAEGE---LYTFGEPESGKLGLPPKLLVNHKVPQLVPGISEK 91
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CG HT +LT E +TFGLG+ GQLG GT +V E
Sbjct: 92 ----VIQVACGGGHTVVLT---------EKAVYTFGLGQFGQLGLGTFTFETSEPKVIES 138
Query: 248 PQYVYLVSVDCGLFHTSVVS 267
+ + V CG HT++++
Sbjct: 139 VKDKKISHVCCGENHTALIT 158
>UNIPROTKB|Q8TD19 [details] [associations]
symbol:NEK9 "Serine/threonine-protein kinase Nek9"
species:9606 "Homo sapiens" [GO:0004674 "protein serine/threonine
kinase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005739 "mitochondrion" evidence=IDA]
InterPro:IPR000719 InterPro:IPR002290 InterPro:IPR008271
InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0051301
GO:GO:0007067 GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112
GO:GO:0004674 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
EMBL:AC007055 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
KO:K08857 CleanEx:HS_NEK8 EMBL:AY048580 EMBL:AY080896 EMBL:AB082526
EMBL:BC009336 EMBL:BC093881 EMBL:BC112101 IPI:IPI00301609
RefSeq:NP_149107.4 UniGene:Hs.7200 ProteinModelPortal:Q8TD19
SMR:Q8TD19 IntAct:Q8TD19 MINT:MINT-2984282 STRING:Q8TD19
PhosphoSite:Q8TD19 DMDM:116242675 PaxDb:Q8TD19 PeptideAtlas:Q8TD19
PRIDE:Q8TD19 DNASU:91754 Ensembl:ENST00000238616 GeneID:91754
KEGG:hsa:91754 UCSC:uc001xrl.3 CTD:91754 GeneCards:GC14M075548
HGNC:HGNC:18591 HPA:HPA001405 MIM:609798 neXtProt:NX_Q8TD19
PharmGKB:PA38593 HOVERGEN:HBG039572 InParanoid:Q8TD19 OMA:GCDGTFL
OrthoDB:EOG4NZTSM PhylomeDB:Q8TD19 BindingDB:Q8TD19
ChEMBL:CHEMBL5257 GenomeRNAi:91754 NextBio:77443
ArrayExpress:Q8TD19 Bgee:Q8TD19 CleanEx:HS_NEK9
Genevestigator:Q8TD19 GermOnline:ENSG00000119638 Uniprot:Q8TD19
Length = 979
Score = 147 (56.8 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 477 FLSNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 528
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 242
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 529 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 577
Query: 243 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
E+P + + ++ G HT+ + G + ++G K C +
Sbjct: 578 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGN 633
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 634 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 686
Query: 352 T 352
T
Sbjct: 687 T 687
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/167 (28%), Positives = 81/167 (48%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 373 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 428
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-DAISPILISGNGPHGPK 312
V CG T V+ G ++++G + G C AG + + P+ ++
Sbjct: 429 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-CMGVDKV---AGPEVLEPMQLNFF------ 477
Query: 313 FQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 478 LSNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 523
Score = 46 (21.3 bits), Expect = 2.0e-06, Sum P(2) = 2.0e-06
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + T P+ Y S C + F V CVI + LT+ D+ TN
Sbjct: 205 YSMAETLVGTPY--YMSPELCQGVKYNFKSDIWAVGCVIFELLTL----KRTFDA-TN-- 255
Query: 70 APIKICSVKAGGMMSLAIDNA 90
P+ +C G+ ++ +D++
Sbjct: 256 -PLNLCVKIVQGIRAMEVDSS 275
>DICTYBASE|DDB_G0282575 [details] [associations]
symbol:DDB_G0282575 "putative GTPase activating
protein (GAP)" species:44689 "Dictyostelium discoideum" [GO:0032851
"positive regulation of Rab GTPase activity" evidence=IEA]
[GO:0032313 "regulation of Rab GTPase activity" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0005097 "Rab GTPase
activator activity" evidence=IEA] InterPro:IPR000195 Pfam:PF00566
PROSITE:PS50086 SMART:SM00164 dictyBase:DDB_G0282575
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AAFI02000047 GO:GO:0005622
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5210
GO:GO:0005097 GO:GO:0032851 SUPFAM:SSF47923 RefSeq:XP_640136.1
ProteinModelPortal:Q54SA3 EnsemblProtists:DDB0235329 GeneID:8623673
KEGG:ddi:DDB_G0282575 InParanoid:Q54SA3 OMA:NIVFRIW Uniprot:Q54SA3
Length = 1194
Score = 130 (50.8 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 45/164 (27%), Positives = 79/164 (48%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--------PKI 180
+++++CGS H++AL + Y YSWG+ +G+LG G+ S + PK
Sbjct: 371 IIQISCGSNHILAL---SDQYH-----VYSWGSAEHGKLGHGEDYSFVSQNPRWINSPKK 422
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
I++ Q+ V V+ G H LT L+S T+G G +GQLG G
Sbjct: 423 IKSL-QEKGVTVISVSSGYSHCMALT--------LDSGILTWGKGSDGQLGTGFRHDIWS 473
Query: 241 PEQVKE-LPQYVYLVSVDCGLFHTSVVS-SAGDVWSWGMEKGLG 282
P ++K + + +V + CG F++ ++ +++ +G LG
Sbjct: 474 PFEIKRVIDKNEKIVQICCGYFNSFFITLEKRELYQFGWSIPLG 517
Score = 121 (47.7 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 61/250 (24%), Positives = 105/250 (42%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G+N+N LG G + L+ + T +Q + + +++CGS H L+ D
Sbjct: 344 GSNDNNFLG-GVINNELQ---MMT-DQMNSIKIIQISCGSNHILALS------DQYHVYS 392
Query: 220 WTFGLGENGQLGHGTTQSALV--------PEQVKELPQY-VYLVSVDCGLFHTSVVSSAG 270
W G E+G+LGHG S + P+++K L + V ++SV G H ++
Sbjct: 393 W--GSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTLDS 450
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+ +WG KG + L D SP I K VQ+ CG ++ +T
Sbjct: 451 GILTWG--KG----SDGQLGTGFRHDIWSPFEIKRVIDKNEKI---VQICCGYFNSFFIT 501
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW-PPLTEEFKQDELNTGGLDDEIKTKDL 389
+ +L+ +G + GK+ D P +W PL + +E N DD+ D
Sbjct: 502 LEKRELYQFGWS----IPLGKSDDILIPTKFIWLNPLKNKNNNNE-NEDKKDDDDDNDDE 556
Query: 390 EGAEERDEKL 399
+ + ++
Sbjct: 557 DENNDNSNRI 566
Score = 114 (45.2 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 52/203 (25%), Positives = 80/203 (39%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALW 94
L F GSN FL G + E T+ IKI + G LA+ + ++
Sbjct: 340 LSFGGSND------NNFL--GGVINNELQMMTDQMNSIKIIQISCGSNHILALSDQYHVY 391
Query: 95 MWGNCPLPDSSTEGGFSLVSSF-----TPSPVWDFH--GHTVVKVACGSEHVVALVSAGE 147
WG+ +S VS +P + G TV+ V+ G H +AL
Sbjct: 392 SWGSAEHGKLGHGEDYSFVSQNPRWINSPKKIKSLQEKGVTVISVSSGYSHCMALTL--- 448
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
D +WG ++GQLG G R P I+ D + ++ CG F++ +T
Sbjct: 449 -----DSGILTWGKGSDGQLGTGFRHDIWSPFEIKRVI-DKNEKIVQICCGYFNSFFITL 502
Query: 208 RKRPNDMLESMCWTFGLGENGQL 230
KR L W+ LG++ +
Sbjct: 503 EKRE---LYQFGWSIPLGKSDDI 522
Score = 75 (31.5 bits), Expect = 2.1e-06, Sum P(2) = 2.1e-06
Identities = 27/104 (25%), Positives = 44/104 (42%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLP------DSSTEGGFSL-VSSFTPSPVWDFHG 126
I + G +L + ++G L+ WG+ DS + G + F S + G
Sbjct: 40 IVQLSCGSTHTLVLSDSGDLYSWGSSNSSGQLGHGDSKNQYGKPKNIKKF--SLIKALSG 97
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+V++V+ G + L G Y +WG+N GQL LG
Sbjct: 98 DSVIQVSTGLDFTFVLTDQGSIY--------NWGSNIEGQLALG 133
Score = 57 (25.1 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 26/113 (23%), Positives = 53/113 (46%)
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG---KTID--FFA--PAIV--LWPPLTE 368
Q++ G +HT+++ ++G L S G+G G LG +ID F P ++ L P E
Sbjct: 568 QISSGYSHTLILNENGECL-SIGQGEFGQLGIPLDHSSIDKDSFVNYPTVIPALLPYFVE 626
Query: 369 EFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYAS 421
+ ++ + + ++L +KL ++ + Q+ L ++E + S
Sbjct: 627 SVQCGRWHSVAI---VSNRNLRDHLTNSKKLKEKQKQKQ--QTNLEILEEFES 674
Score = 38 (18.4 bits), Expect = 4.9e-05, Sum P(3) = 4.9e-05
Identities = 8/44 (18%), Positives = 20/44 (45%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGN 98
G P +++ S + + V G + + + G+++ WG+
Sbjct: 81 GKPKNIKKFSLIKALSGDSVIQVSTGLDFTFVLTDQGSIYNWGS 124
>UNIPROTKB|F1MMV0 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0030292 OMA:VSALHHK
GeneTree:ENSGT00700000104160 EMBL:DAAA02025482 EMBL:DAAA02025483
IPI:IPI00708608 Ensembl:ENSBTAT00000038116 Uniprot:F1MMV0
Length = 1353
Score = 155 (59.6 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 42/134 (31%), Positives = 66/134 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQK-------- 195
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 277 ME--KGLGLCPNAS 288
+ LGL P S
Sbjct: 255 LNIFHQLGLIPPPS 268
Score = 39 (18.8 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 392
I+ PP T K + N+ E+ T D EG+
Sbjct: 1001 IIQSPPSTGLLKSGKTNSVESLPELLTSDSEGS 1033
>UNIPROTKB|F1MM88 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0019901 "protein kinase binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004674 "protein serine/threonine kinase
activity" evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS50012 GeneTree:ENSGT00700000104074 OMA:GCDGTFL
EMBL:DAAA02029619 IPI:IPI00714098 Ensembl:ENSBTAT00000022098
Uniprot:F1MM88
Length = 994
Score = 145 (56.1 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 63/241 (26%), Positives = 99/241 (41%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F + V +V+CG HVV L E Y SWG G+LGL E P+ ++
Sbjct: 494 FLSNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKVDV 545
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-E 242
+ V CG T LLT + +L C GL E +LG S ++ E
Sbjct: 546 ---PKALIIVAVQCGCDGTFLLTQSGK---VLA--C---GLNEFNKLGLNQCMSGIINHE 594
Query: 243 QVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
E+P + + ++ G HT+ + G + ++G K C +
Sbjct: 595 AYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAALDERGRLLTFGCNK----CGQLGVGN 650
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 651 YKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTP 703
Query: 352 T 352
T
Sbjct: 704 T 704
Score = 130 (50.8 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 46/166 (27%), Positives = 80/166 (48%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 390 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 445
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG T V+ G ++++G + G C + + + + P+ +
Sbjct: 446 RQVSCGDDFTVCVTDEGQLYAFGSDY-YG-C--MGVDKVAGAEVLEPMQLDFF------L 495
Query: 314 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+PV QV+CG H V++T + +++SWG G G LG D++ P
Sbjct: 496 SNPVEQVSCGDNHVVVLTRNK-EVYSWGCGEYGRLGLDSEEDYYTP 540
Score = 46 (21.3 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 20/81 (24%), Positives = 34/81 (41%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + T P+ Y S C + F V CVI + LT+ D+ TN
Sbjct: 221 YSMAETLVGTPY--YMSPELCQGVKYNFKSDIWAVGCVIFELLTL----KRTFDA-TN-- 271
Query: 70 APIKICSVKAGGMMSLAIDNA 90
P+ +C G+ ++ +D++
Sbjct: 272 -PLNLCVKIVQGIRAMEVDSS 291
>GENEDB_PFALCIPARUM|PFE0420c [details] [associations]
symbol:PFE0420c "guanidine nucleotide exchange
factor, putative" species:5833 "Plasmodium falciparum" [GO:0006323
"DNA packaging" evidence=ISS] [GO:0020011 "apicoplast"
evidence=RCA] INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 131 (51.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 42/156 (26%), Positives = 73/156 (46%)
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
WD + V+ + GS+H +A G+ Y SWG NG+LGLG+ +S +P++I
Sbjct: 434 WDKKKNVVIHCSAGSKHSLACNLHGDIY--------SWGYGGNGRLGLGNIKSYNKPQLI 485
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV- 240
+ +Y V G+ H+ + +T+G G+ +LGHG +
Sbjct: 486 KGLRNKR--ILY-VCAGTSHSGCIDSNYN--------VYTWGNGKFYKLGHGNDDIDIYY 534
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
P+ V+ L + + G F++ ++ GDV+ WG
Sbjct: 535 PKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 105 (42.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSP 189
K++ G +H + YK + + ++WG N+ QLGLG + P ++ F DS
Sbjct: 21 KISTGLDHYACVAY----YKNKPSI-FTWGGNSCNQLGLGINNRFVNNPTVVCFF--DS- 72
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ V + C ++ T +L +K ND+ S+ ++FG G NG LG+
Sbjct: 73 FIVASICCTNYATFVLV-KKNVNDIGCSV-YSFGKGNNGLLGY 113
Score = 96 (38.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 311 PKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 369
PK ++ ++CG HT+ + G L+SWG G +G G + + P + P + +
Sbjct: 345 PKKNTKIKFISCGDMHTLAICTGGV-LYSWGYNNFGCIGNGTNQNVYEPTPIFLEPHSVD 403
Query: 370 FKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
D N DD+ ++++ + ++ ++ A LHG I+
Sbjct: 404 NNGDN-NDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIY 461
Score = 84 (34.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 254 VSVDC--GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V + C G H+ + GD++SWG G G N L P LI G
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGY--G-G---NGRLGLGNIKSYNKPQLIKGL----- 488
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIV 361
+ + + V G +H+ + D Y +++WG G+ LG G ID + P +V
Sbjct: 489 RNKRILYVCAGTSHSGCI-DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 83 (34.3 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 62/266 (23%), Positives = 107/266 (40%)
Query: 214 MLES-MCWTFGLGENGQLGHGT---TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+LES +T G +NG+LG+G + VP + + + + CG + VS
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKI--IKIACGYNYVLCVSDV 824
Query: 270 GDVWSWGM----EKGLGLCPN-------ASLTR--------NEAGDAISPILISGNGPHG 310
G V+ WG + G+G+ + +LT + + I+ +L GN +G
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYDHSACIINKLLDKGN-TNG 883
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
+ V G + +D+ L+ WG SG +G G +D+ I+L +
Sbjct: 884 VNNVNNVNGVNGVNN--YSSDECGDLYIWGNAESGKVGLG--VDYTQGCILLPRKINIIN 939
Query: 371 KQDELNTGGLDDEI--KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
K + + G T +L + E+ K++ + +SV + ILH +I+
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKV--ILHNNIY 997
Query: 429 GKPFAAEQDIPISLKDMGFFDITKEW 454
K A I L GF I E+
Sbjct: 998 IKDILAGNTYSIILSVDGFIYIFGEF 1023
Score = 80 (33.2 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G NG+LG G +S P+ +K L + ++ V G H+ + S +V++WG K
Sbjct: 461 YSWGYGGNGRLGLGNIKSYNKPQLIKGL-RNKRILYVCAGTSHSGCIDSNYNVYTWGNGK 519
Score = 54 (24.1 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWG 97
K KI + G M +LAI G L+ WG
Sbjct: 346 KKNTKIKFISCGDMHTLAICTGGVLYSWG 374
Score = 52 (23.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 306 NGPHGPKFQ-------DPVQVACGAAH-TVLVTDDGYKLWSWGRGRSGVLGTGK 351
NG HG F+ V++ G+ H +V + + G K+++ G ++G LG G+
Sbjct: 736 NGSHGNIFEKNKLVLKSKVKIIDGSDHFSVFLLESG-KVYTAGYNKNGELGNGE 788
>UNIPROTKB|Q8I418 [details] [associations]
symbol:RCC1 "Guanidine nucleotide exchange factor"
species:36329 "Plasmodium falciparum 3D7" [GO:0006323 "DNA
packaging" evidence=ISS] [GO:0020011 "apicoplast" evidence=RCA]
INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0006323 EMBL:AL844504
GenomeReviews:AL844504_GR RefSeq:XP_001351643.1
ProteinModelPortal:Q8I418 EnsemblProtists:PFE0420c:mRNA
GeneID:812857 KEGG:pfa:PFE0420c EuPathDB:PlasmoDB:PF3D7_0508500
HOGENOM:HOG000284105 ProtClustDB:CLSZ2446497 Uniprot:Q8I418
Length = 2606
Score = 131 (51.2 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 42/156 (26%), Positives = 73/156 (46%)
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
WD + V+ + GS+H +A G+ Y SWG NG+LGLG+ +S +P++I
Sbjct: 434 WDKKKNVVIHCSAGSKHSLACNLHGDIY--------SWGYGGNGRLGLGNIKSYNKPQLI 485
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV- 240
+ +Y V G+ H+ + +T+G G+ +LGHG +
Sbjct: 486 KGLRNKR--ILY-VCAGTSHSGCIDSNYN--------VYTWGNGKFYKLGHGNDDIDIYY 534
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
P+ V+ L + + G F++ ++ GDV+ WG
Sbjct: 535 PKLVECLNHNKKVCMLSFGCFNSLALNVKGDVYVWG 570
Score = 105 (42.0 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 32/103 (31%), Positives = 55/103 (53%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSP 189
K++ G +H + YK + + ++WG N+ QLGLG + P ++ F DS
Sbjct: 21 KISTGLDHYACVAY----YKNKPSI-FTWGGNSCNQLGLGINNRFVNNPTVVCFF--DS- 72
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ V + C ++ T +L +K ND+ S+ ++FG G NG LG+
Sbjct: 73 FIVASICCTNYATFVLV-KKNVNDIGCSV-YSFGKGNNGLLGY 113
Score = 96 (38.9 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 25/119 (21%), Positives = 49/119 (41%)
Query: 311 PKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 369
PK ++ ++CG HT+ + G L+SWG G +G G + + P + P + +
Sbjct: 345 PKKNTKIKFISCGDMHTLAICTGGV-LYSWGYNNFGCIGNGTNQNVYEPTPIFLEPHSVD 403
Query: 370 FKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
D N DD+ ++++ + ++ ++ A LHG I+
Sbjct: 404 NNGDN-NDDDYDDDNNNNSTYKFHKKEDSIKWDKKKNVVIHCSAGSKHSLACNLHGDIY 461
Score = 84 (34.6 bits), Expect = 6.5e-05, Sum P(2) = 6.5e-05
Identities = 32/111 (28%), Positives = 49/111 (44%)
Query: 254 VSVDC--GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V + C G H+ + GD++SWG G G N L P LI G
Sbjct: 440 VVIHCSAGSKHSLACNLHGDIYSWGY--G-G---NGRLGLGNIKSYNKPQLIKGL----- 488
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIV 361
+ + + V G +H+ + D Y +++WG G+ LG G ID + P +V
Sbjct: 489 RNKRILYVCAGTSHSGCI-DSNYNVYTWGNGKFYKLGHGNDDIDIYYPKLV 538
Score = 83 (34.3 bits), Expect = 8.2e-05, Sum P(2) = 8.2e-05
Identities = 62/266 (23%), Positives = 107/266 (40%)
Query: 214 MLES-MCWTFGLGENGQLGHGT---TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+LES +T G +NG+LG+G + VP + + + + CG + VS
Sbjct: 767 LLESGKVYTAGYNKNGELGNGEFNLKKKFGVPILLNICVNKI--IKIACGYNYVLCVSDV 824
Query: 270 GDVWSWGM----EKGLGLCPN-------ASLTR--------NEAGDAISPILISGNGPHG 310
G V+ WG + G+G+ + +LT + + I+ +L GN +G
Sbjct: 825 GLVYGWGKNDKSQLGIGVIKDFYEPVHVKNLTNVINIFAGYDHSACIINKLLDKGN-TNG 883
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
+ V G + +D+ L+ WG SG +G G +D+ I+L +
Sbjct: 884 VNNVNNVNGVNGVNN--YSSDECGDLYIWGNAESGKVGLG--VDYTQGCILLPRKINIIN 939
Query: 371 KQDELNTGGLDDEI--KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
K + + G T +L + E+ K++ + +SV + ILH +I+
Sbjct: 940 KIYKCSLGNSHSLFLTNTNELYVCGSNNNGRLGLFEKSKMVCNIVSVPTKV--ILHNNIY 997
Query: 429 GKPFAAEQDIPISLKDMGFFDITKEW 454
K A I L GF I E+
Sbjct: 998 IKDILAGNTYSIILSVDGFIYIFGEF 1023
Score = 80 (33.2 bits), Expect = 5.0e-05, Sum P(3) = 5.0e-05
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G NG+LG G +S P+ +K L + ++ V G H+ + S +V++WG K
Sbjct: 461 YSWGYGGNGRLGLGNIKSYNKPQLIKGL-RNKRILYVCAGTSHSGCIDSNYNVYTWGNGK 519
Score = 54 (24.1 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWG 97
K KI + G M +LAI G L+ WG
Sbjct: 346 KKNTKIKFISCGDMHTLAICTGGVLYSWG 374
Score = 52 (23.4 bits), Expect = 3.6e-05, Sum P(3) = 3.6e-05
Identities = 16/54 (29%), Positives = 29/54 (53%)
Query: 306 NGPHGPKFQ-------DPVQVACGAAH-TVLVTDDGYKLWSWGRGRSGVLGTGK 351
NG HG F+ V++ G+ H +V + + G K+++ G ++G LG G+
Sbjct: 736 NGSHGNIFEKNKLVLKSKVKIIDGSDHFSVFLLESG-KVYTAGYNKNGELGNGE 788
>UNIPROTKB|F1RQL8 [details] [associations]
symbol:IBTK "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051209 "release of sequestered calcium ion into
cytosol" evidence=IEA] [GO:0030292 "protein tyrosine kinase
inhibitor activity" evidence=IEA] [GO:0019901 "protein kinase
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005634 GO:GO:0005737 GO:GO:0051209
Gene3D:1.25.40.20 InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 GO:GO:0030292
OMA:VSALHHK GeneTree:ENSGT00700000104160 EMBL:CU392845
Ensembl:ENSSSCT00000004926 Uniprot:F1RQL8
Length = 1346
Score = 154 (59.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 41/134 (30%), Positives = 66/134 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGVYIKQVVLC-KFHSVFLSQK-------- 195
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGPGGRLGHGDEQTCLVPRLVEGLSGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 277 ME--KGLGLCPNAS 288
+ LG+ P S
Sbjct: 255 LNIFHQLGIIPPPS 268
Score = 39 (18.8 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 11/33 (33%), Positives = 16/33 (48%)
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 392
I+ PP T K + N+ E+ T D EG+
Sbjct: 999 IIQSPPSTGLLKSGKTNSVESLPELLTSDSEGS 1031
>MGI|MGI:1918677 [details] [associations]
symbol:Ibtk "inhibitor of Bruton agammaglobulinemia tyrosine
kinase" species:10090 "Mus musculus" [GO:0001933 "negative
regulation of protein phosphorylation" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030292
"protein tyrosine kinase inhibitor activity" evidence=ISO]
[GO:0051209 "release of sequestered calcium ion into cytosol"
evidence=ISO] [GO:0061099 "negative regulation of protein tyrosine
kinase activity" evidence=ISO] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50088
PROSITE:PS50097 SMART:SM00225 SMART:SM00248 MGI:MGI:1918677
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0051209 Gene3D:1.25.40.20 InterPro:IPR020683
Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297 EMBL:CH466522
Gene3D:3.30.710.10 InterPro:IPR011333 SUPFAM:SSF54695
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GO:GO:0030292 CTD:25998 HOVERGEN:HBG081779 OMA:VSALHHK
OrthoDB:EOG4J6RQ1 ChiTaRS:IBTK EMBL:BC137798 EMBL:AK030895
EMBL:AK077387 EMBL:AK129353 IPI:IPI00660767 IPI:IPI00750982
RefSeq:NP_001074751.1 UniGene:Mm.22315 UniGene:Mm.487092
ProteinModelPortal:Q6ZPR6 SMR:Q6ZPR6 PhosphoSite:Q6ZPR6
PaxDb:Q6ZPR6 PRIDE:Q6ZPR6 Ensembl:ENSMUST00000039213 GeneID:108837
KEGG:mmu:108837 GeneTree:ENSGT00700000104160 HOGENOM:HOG000090207
InParanoid:Q6ZPR6 NextBio:361375 Bgee:Q6ZPR6 Genevestigator:Q6ZPR6
Uniprot:Q6ZPR6
Length = 1352
Score = 154 (59.3 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELLDLFSRSGVYVKQVVLC-KFHSVFLSQK-------- 195
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 196 GQVYTCGHGRGGRLGHGDEQTCLVPRLVEGLSGH-NCSQVAAAKDHTVVLTDDGCVYTFG 254
Query: 277 MEK--GLGLCP 285
+ LG+ P
Sbjct: 255 LNMFHQLGIIP 265
Score = 37 (18.1 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 379 GLDDEIKTKDLEGAEERD--EKLSSAMEEMKLLQSKLSVMER 418
G+ D+ + L+ ++ LSS +E ++L K++V+ +
Sbjct: 711 GVGDDDPVRMLQSVAKKFGLSNLSSRLEGVRLENEKINVIAK 752
>UNIPROTKB|F1NAG9 [details] [associations]
symbol:NEK9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0019901 "protein kinase binding"
evidence=IEA] InterPro:IPR000719 InterPro:IPR002290
InterPro:IPR008271 InterPro:IPR011009 Pfam:PF00069 PROSITE:PS00108
PROSITE:PS50011 SMART:SM00220 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005739 GO:GO:0005524 SUPFAM:SSF56112 GO:GO:0004674
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 GeneTree:ENSGT00700000104074
OMA:GCDGTFL EMBL:AADN02003466 IPI:IPI00598995
Ensembl:ENSGALT00000016792 Uniprot:F1NAG9
Length = 984
Score = 140 (54.3 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 68/284 (23%), Positives = 114/284 (40%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G ++ I + G L+ +G+ + + P + F + V +V+
Sbjct: 438 IRQVSCGDDFTVCITDEGQLYAFGSDYYGCIGIDKAYGS-EVLEPLQLDFFLTNPVEQVS 496
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG HV L E Y +WG G+LGL E P+ ++ +
Sbjct: 497 CGDNHVAVLTRNREVY--------TWGCGEYGRLGLDSEEDHYTPQKVDV---PKTLNIV 545
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE--NGQLGHGT---TQSALVPEQVKELP 248
V CG T LLT + + GL + +G + H T A K+L
Sbjct: 546 SVHCGCDGTFLLTQTGKVLACGLNEFNKLGLNQCTSGIINHDTYCEVPYATSLTLAKQLS 605
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Y + ++ G HT+ + G + ++G K C + + I+ L++G P
Sbjct: 606 FYK-IRTISPGKTHTASIDERGRLLTFGSNK----CGQLGVGDYKKHLGIN--LLAG--P 656
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 657 LGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 697
Score = 47 (21.6 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 21/85 (24%), Positives = 34/85 (40%)
Query: 10 YYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK 69
Y + T P+ Y S C + F V CVI + LT+ D+ TN
Sbjct: 215 YSMAETLVGTPY--YMSPELCQGVKYNFKSDIWAVGCVIFELLTL----KRTFDA-TN-- 265
Query: 70 APIKICSVKAGGMMSLAIDNAGALW 94
P+ +C G ++ +D++ W
Sbjct: 266 -PLNLCVKIVQGNRAMEVDSSVYSW 289
>FB|FBgn0002638 [details] [associations]
symbol:Rcc1 "Regulator of chromosome condensation 1 ortholog
(H. sapiens)" species:7227 "Drosophila melanogaster" [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0007417 "central nervous system
development" evidence=IDA] [GO:0030261 "chromosome condensation"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=ISS;IDA]
[GO:0007076 "mitotic chromosome condensation" evidence=NAS]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISS;NAS] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0007346
"regulation of mitotic cell cycle" evidence=IDA] [GO:0006607
"NLS-bearing substrate import into nucleus" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0046822
"regulation of nucleocytoplasmic transport" evidence=IMP]
[GO:0050767 "regulation of neurogenesis" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005634 GO:GO:0007346 GO:GO:0005737 EMBL:AE014296
GO:GO:0051301 GO:GO:0007067 GO:GO:0007417 GO:GO:0046822
GO:GO:0003682 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005085 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 eggNOG:COG5184 GO:GO:0050767 PDB:3MVD PDBsum:3MVD
GeneTree:ENSGT00700000104160 EMBL:X58530 EMBL:AY070540 PIR:S15028
RefSeq:NP_523943.1 RefSeq:NP_729118.1 RefSeq:NP_729119.1
UniGene:Dm.8023 ProteinModelPortal:P25171 SMR:P25171 DIP:DIP-17766N
IntAct:P25171 MINT:MINT-781282 STRING:P25171 PaxDb:P25171
EnsemblMetazoa:FBtr0077074 EnsemblMetazoa:FBtr0077075
EnsemblMetazoa:FBtr0077076 GeneID:38669 KEGG:dme:Dmel_CG10480
CTD:38669 FlyBase:FBgn0002638 InParanoid:P25171 KO:K11493
OMA:PFEAIWA OrthoDB:EOG437PW4 PhylomeDB:P25171 ChiTaRS:Bj1
GenomeRNAi:38669 NextBio:809817 Bgee:P25171 GermOnline:CG10480
Uniprot:P25171
Length = 547
Score = 96 (38.9 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 40/131 (30%), Positives = 62/131 (47%)
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
T G LVC G + GQLGLG E L K + P AV +++ G H +LT
Sbjct: 39 TVLGNVLVC---GNGDVGQLGLG--EDILERKRLSPV-AGIPDAV-DISAGGMHNLVLT- 90
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+ D+ ++FG + G LG T++ S P+ + +LP +S G H++
Sbjct: 91 --KSGDI-----YSFGCNDEGALGRDTSEDGSESKPDLI-DLPGKALCISA--GDSHSAC 140
Query: 266 VSSAGDVWSWG 276
+ G V++WG
Sbjct: 141 LLEDGRVFAWG 151
Score = 87 (35.7 bits), Expect = 9.2e-06, Sum P(2) = 9.2e-06
Identities = 29/82 (35%), Positives = 40/82 (48%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 376
V V CG + VT DG KL+SWG G + LG G D P +V+ + K L
Sbjct: 348 VSVGCGEVCSYAVTIDG-KLYSWGSGVNNQLGVGDGDDELEPIVVV--SKNTQGKHMLLA 404
Query: 377 TGGLDDEIKTKDLEGAEERDEK 398
+GG I L A+++D+K
Sbjct: 405 SGGGQHAIF---LVKADKQDQK 423
Score = 84 (34.6 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 54/223 (24%), Positives = 94/223 (42%)
Query: 58 DSLEDDSKTNHKA---PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
D+ ED S++ P K + AG S + G ++ WG+ DS G ++
Sbjct: 109 DTSEDGSESKPDLIDLPGKALCISAGDSHSACLLEDGRVFAWGS--FRDSHGNMGLTIDG 166
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA----NNNGQLGLG 170
+ +P+ G +A G++H+V L +AG+ + + C G + G G
Sbjct: 167 N-KRTPIDLMEGTVCCSIASGADHLVILTTAGKVFT---VGCAEQGQLGRLSERSISGEG 222
Query: 171 DRESR--LRP-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
R R LRP ++I T + P+ T ++ T + R+ ++ W GL
Sbjct: 223 RRGKRDLLRPTQLIIT--RAKPFEAIWAT--NYCTFM---RESQTQVI----WATGLNNF 271
Query: 228 GQLGHGTT--QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
QL H T + AL P + EL ++ G HT ++++
Sbjct: 272 KQLAHETKGKEFALTPIKT-ELKDIRHIAG---GQHHTVILTT 310
>MGI|MGI:1344037 [details] [associations]
symbol:Rpgr "retinitis pigmentosa GTPase regulator"
species:10090 "Mus musculus" [GO:0001750 "photoreceptor outer
segment" evidence=ISO] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] [GO:0005813 "centrosome"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005929
"cilium" evidence=IDA] [GO:0007601 "visual perception"
evidence=ISO;IMP] [GO:0030030 "cell projection organization"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=ISO]
[GO:0042462 "eye photoreceptor cell development" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0050896 "response
to stimulus" evidence=IEA] MGI:MGI:1344037 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005794 GO:GO:0005737 GO:GO:0005813
GO:GO:0005929 GO:GO:0007601 GO:GO:0050896 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0042073
eggNOG:COG5184 GO:GO:0036064 GO:GO:0042462
GeneTree:ENSGT00700000104160 GO:GO:0036126 CTD:6103
HOGENOM:HOG000231314 HOVERGEN:HBG026899 ChiTaRS:RPGR EMBL:AF044677
EMBL:AJ238396 EMBL:AJ318464 EMBL:AL671042 EMBL:AK017192
EMBL:BX005236 EMBL:HQ260316 IPI:IPI00122416 IPI:IPI00128188
IPI:IPI00230648 IPI:IPI00230650 RefSeq:NP_001171421.1
RefSeq:NP_035415.1 UniGene:Mm.247556 ProteinModelPortal:Q9R0X5
SMR:Q9R0X5 DIP:DIP-46319N STRING:Q9R0X5 PhosphoSite:Q9R0X5
PRIDE:Q9R0X5 Ensembl:ENSMUST00000044598 GeneID:19893 KEGG:mmu:19893
UCSC:uc009sqj.2 InParanoid:Q9R0X5 NextBio:297416 CleanEx:MM_RPGR
Genevestigator:Q9R0X5 GermOnline:ENSMUSG00000031174 Uniprot:Q9R0X5
Length = 1001
Score = 136 (52.9 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 52/192 (27%), Positives = 90/192 (46%)
Query: 97 GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVC 156
G L D+ F + FTP+ T+ +++ G+ AL G+ +
Sbjct: 117 GQLGLGDTDDRDTFHQIVFFTPAD-------TIKQLSAGANTSAALTEDGKLFM------ 163
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG N+ GQ+GL D+ + P + T + W ++CG +H+A +T ++
Sbjct: 164 --WGDNSEGQIGLEDKSNVCIPHEV-TVGKPISW----ISCGYYHSAFVT--------MD 208
Query: 217 SMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+TFG ENG+LG + + P++V +P+ V + V CG HT VV + V++
Sbjct: 209 GELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV--IQVACGGGHT-VVLTEKVVYA 265
Query: 275 WGM----EKGLG 282
+G+ + GLG
Sbjct: 266 FGLGQFGQLGLG 277
Score = 122 (48.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 44/137 (32%), Positives = 70/137 (51%)
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
SA T GE Y++G NG+LGL + E + + + P V +V CG HT
Sbjct: 202 SAFVTMDGE---LYTFGEPENGKLGLPN-ELLMNHRSPQRV-LGIPERVIQVACGGGHTV 256
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVKELPQYVYLVSVDCG 259
+LT E + + FGLG+ GQLG GT T + E++K+ Q + +S CG
Sbjct: 257 VLT---------EKVVYAFGLGQFGQLGLGTFLFETSEPKIIERIKD--QKICHIS--CG 303
Query: 260 LFHTSVVSSAGDVWSWG 276
HT++++ G ++++G
Sbjct: 304 ENHTALMTELGLLYTFG 320
Score = 119 (46.9 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 42/133 (31%), Positives = 72/133 (54%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-E 278
F G+N GQ+G + +P +V + + + +S CG +H++ V+ G+++++G E
Sbjct: 162 FMWGDNSEGQIGLEDKSNVCIPHEVT-VGKPISWIS--CGYYHSAFVTMDGELYTFGEPE 218
Query: 279 KG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G LGL PN L + SP + G P + +QVACG HTV++T+ ++
Sbjct: 219 NGKLGL-PNELLMNHR-----SPQRVLGI----P--ERVIQVACGGGHTVVLTEK--VVY 264
Query: 338 SWGRGRSGVLGTG 350
++G G+ G LG G
Sbjct: 265 AFGLGQFGQLGLG 277
Score = 51 (23.0 bits), Expect = 9.8e-06, Sum P(2) = 9.8e-06
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 364 PPLTEEFKQDELNTGGLDDEIKTKDLEGA--EERDEKLSSAMEE 405
P L+E K +E G +D+EI ++E EER E +EE
Sbjct: 819 PQLSETVKPEE---GEMDEEISILNVEDTVEEERKEGEKEIVEE 859
>MGI|MGI:1351630 [details] [associations]
symbol:Sergef "secretion regulating guanine nucleotide
exchange factor" species:10090 "Mus musculus" [GO:0005085
"guanyl-nucleotide exchange factor activity" evidence=IEA]
[GO:0005087 "Ran guanyl-nucleotide exchange factor activity"
evidence=ISA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0050709 "negative regulation of
protein secretion" evidence=ISO] [GO:0050790 "regulation of
catalytic activity" evidence=ISA] InterPro:IPR027048
MGI:MGI:1351630 INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005634
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005087 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243952 EMBL:AK145819
EMBL:AK147848 EMBL:BC049603 EMBL:BC119533 EMBL:BC119534
IPI:IPI00134816 RefSeq:NP_038817.1 UniGene:Mm.76659
ProteinModelPortal:Q80YD6 SMR:Q80YD6 STRING:Q80YD6 PRIDE:Q80YD6
Ensembl:ENSMUST00000033127 GeneID:27414 KEGG:mmu:27414
UCSC:uc009gyp.2 InParanoid:Q80YD6 NextBio:305446 Bgee:Q80YD6
Genevestigator:Q80YD6 GermOnline:ENSMUSG00000030839 Uniprot:Q80YD6
Length = 464
Score = 133 (51.9 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 45/132 (34%), Positives = 65/132 (49%)
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
A ET V ++WGAN+ GQLGLG +E P+ + F Q + VT G H+A+
Sbjct: 7 ASETVSAA-AVLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAG--CIKSVTGGGGHSAV 63
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
+T D+ +C GL ++GQLG G T+ L K L + + V CG T
Sbjct: 64 VTDG---GDLF--VC---GLNKDGQLGLGHTEEVLRFTICKPL-RGCPIRQVACGWDFTI 114
Query: 265 VVSSAGDVWSWG 276
+++ G V S G
Sbjct: 115 MLTEKGQVLSCG 126
>ZFIN|ZDB-GENE-061220-11 [details] [associations]
symbol:sergef "secretion regulating guanine
nucleotide exchange factor" species:7955 "Danio rerio" [GO:0050709
"negative regulation of protein secretion" evidence=IEA]
InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
ZFIN:ZDB-GENE-061220-11 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 HOGENOM:HOG000154414 HOVERGEN:HBG051746
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:BC124691
IPI:IPI00490832 UniGene:Dr.91496 InParanoid:Q08BJ6 Uniprot:Q08BJ6
Length = 423
Score = 130 (50.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 39/120 (32%), Positives = 62/120 (51%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WGAN+ GQLG G+ E + P+ +E+ Q+ + VT G H+AL++ ++L
Sbjct: 40 YTWGANSYGQLGQGNAEDQAEPRRVESGLQEEQ--IRAVTGGGGHSALISDS---GELL- 93
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+C G GQLG G T ++ Q LP + + V CG T +++ G V + G
Sbjct: 94 -VC---GQNHKGQLGLGHTLE-IMTFQTCPLPGFGRVQQVSCGWDFTIILTGDGLVLACG 148
Score = 123 (48.4 bits), Expect = 0.00018, P = 0.00018
Identities = 75/290 (25%), Positives = 109/290 (37%)
Query: 15 TCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPI-- 72
TC F ++C D + +G ++ C F +G S E KT+ P+
Sbjct: 116 TCPLPGFGRVQQVSCGWDFTIILTGDGLVLACGSNAFGQLGV--SAE---KTHSAEPLLL 170
Query: 73 -----KICSVKAGGMMSLAIDNAGALWMWGNCPLPDS----STEGGFSLVSSFTPSPVWD 123
+ SV AG +LA +G ++ WG + + + S +SS P V
Sbjct: 171 KSFHEPVTSVAAGLRHALASTASGCVYQWGTGLSSHAKRMLNPQPVPSHLSSKEPCLVPG 230
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F T KV GS H L T GE + WG+N +GQL G L + +
Sbjct: 231 FAHVTTQKVIAGSAHCACL-----TVNGE---LFLWGSNKHGQLISGSLFLPLPVALDRS 282
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW-TFGLGENGQLGHGTTQSALVPE 242
QD V +V G H T R W G+ GQ H + +
Sbjct: 283 MLQDE--RVSDVHSGWTHLVAQTESGRV------FTWGRSNYGQLGQTNHSMEKQSCDEH 334
Query: 243 QVK---ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
V+ E+ + CG H V G V+SWG + G+C + SL
Sbjct: 335 LVRSPVEVKALFGATQISCGSEHNLAVVG-GRVFSWGWNEH-GMCGDGSL 382
>UNIPROTKB|G3V1B4 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0050709 "negative
regulation of protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 EMBL:CH471064 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS00626
PROSITE:PS50012 PANTHER:PTHR22870:SF7 UniGene:Hs.32470
HGNC:HGNC:17499 EMBL:AC055860 EMBL:AC124058 EMBL:AC124078
ProteinModelPortal:G3V1B4 SMR:G3V1B4 Ensembl:ENST00000525422
ArrayExpress:G3V1B4 Bgee:G3V1B4 Uniprot:G3V1B4
Length = 354
Score = 128 (50.1 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WGAN+ GQLGLG +E L P+ + F + P +V +T G H+A++T D+
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLNDFCK--PRSVRRITGGGGHSAVVTDG---GDLF- 71
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+C GL ++GQLG G T+ K L + V CG T +++ G V S G
Sbjct: 72 -VC---GLNKDGQLGLGHTEDIPYFTPCKSLFGCP-IQQVACGWDFTIMLTENGQVLSCG 126
Score = 119 (46.9 bits), Expect = 0.00036, P = 0.00036
Identities = 76/286 (26%), Positives = 117/286 (40%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSL-VSSFTPSPVWDFHGHT 128
P + + GG S + + G L++ C L G G + + FTP G
Sbjct: 48 PRSVRRITGGGGHSAVVTDGGDLFV---CGLNKDGQLGLGHTEDIPYFTPCK--SLFGCP 102
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQD 187
+ +VACG + + L T G+ L C G+N+ GQLG+ R + P+ IE +
Sbjct: 103 IQQVACGWDFTIML-----TENGQVLSC---GSNSFGQLGVPHGPRRCVVPQAIELHKEK 154
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ-LGHGTTQ----SALVPE 242
V + G H T + + W GL G+ L G T +A P
Sbjct: 155 ----VVCIAAGLRHAVAAT---ASGIVFQ---WGTGLASCGRRLCPGQTLPLFFTAKEPS 204
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+V L + + V G H++ ++ AG+V+ WG K + L NEA P
Sbjct: 205 RVTGL-ENSKAMCVLAGSDHSASLTDAGEVYVWGSNK------HGQLA-NEAAFLPVPQK 256
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
I H + + + G H V T+ G K+++WGR G LG
Sbjct: 257 IEA---HCFQNEKVTAIWSGWTHLVAQTETG-KMFTWGRADYGQLG 298
>UNIPROTKB|C9JQZ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925791
ProteinModelPortal:C9JQZ4 SMR:C9JQZ4 STRING:C9JQZ4
Ensembl:ENST00000430407 ArrayExpress:C9JQZ4 Bgee:C9JQZ4
Uniprot:C9JQZ4
Length = 283
Score = 125 (49.1 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 57/203 (28%), Positives = 88/203 (43%)
Query: 54 IGAPDSLEDDSKTNHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+G S+E K + K+ V AG + A+ + G +++WG+ D++ G
Sbjct: 99 LGRDTSVEGSEMVPGKVELQEKVVQVSAGDSHTAALTDDGRVFLWGS--FRDNN--GVIG 154
Query: 112 LVSSFTPS--PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG--------- 160
L+ S PV VVKVA G++H+V L + G+ Y L C G
Sbjct: 155 LLEPMKKSMVPVQVQLDVPVVKVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELF 211
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESM 218
AN G+ GL E L PK + ++ S V + CG++ T ++H E
Sbjct: 212 ANRGGRQGL---ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGH 260
Query: 219 CWTFGLGENGQLGHGTTQSALVP 241
+ FGL QLG T+S +P
Sbjct: 261 VYGFGLSNYHQLGTPGTESCFIP 283
Score = 121 (47.7 bits), Expect = 0.00013, P = 0.00013
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
Score = 119 (46.9 bits), Expect = 0.00022, P = 0.00022
Identities = 61/226 (26%), Positives = 93/226 (41%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHT 128
P + +AGGM ++ + +G ++ +G C D G + V S P V +
Sbjct: 66 PEDVVQAEAGGMHTVCLSKSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EK 120
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQ 186
VV+V+ G H AL G + WG+ +NNG +GL E + +
Sbjct: 121 VVQVSAGDSHTAALTDDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQL 170
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--------GTTQSA 238
D P V +V G+ H +LT D+ +T G GE GQLG G Q
Sbjct: 171 DVP--VVKVASGNDHLVMLT---ADGDL-----YTLGCGEQGQLGRVPELFANRGGRQGL 220
Query: 239 ---LVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
LVP+ V + +V CG + T +S G V+ +G+
Sbjct: 221 ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
>UNIPROTKB|Q9UGK8 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9606 "Homo sapiens" [GO:0005087 "Ran
guanyl-nucleotide exchange factor activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0050709 "negative
regulation of protein secretion" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IDA] InterPro:IPR027048 INTERPRO:IPR000408
Pfam:PF00415 GO:GO:0005737 GO:GO:0007165 GO:GO:0005730
GO:GO:0045111 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0005087 PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626
PROSITE:PS50012 GO:GO:0050709 eggNOG:COG5184 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 KO:K15421 OMA:NIWAPKP
OrthoDB:EOG4J1183 PANTHER:PTHR22870:SF7 EMBL:AJ243950 EMBL:AJ243951
EMBL:BC065375 IPI:IPI00015919 IPI:IPI00383576 RefSeq:NP_036271.1
UniGene:Hs.32470 ProteinModelPortal:Q9UGK8 SMR:Q9UGK8 IntAct:Q9UGK8
STRING:Q9UGK8 PhosphoSite:Q9UGK8 DMDM:38257790 PaxDb:Q9UGK8
PeptideAtlas:Q9UGK8 PRIDE:Q9UGK8 Ensembl:ENST00000265965
Ensembl:ENST00000528200 GeneID:26297 KEGG:hsa:26297 UCSC:uc001mnm.3
UCSC:uc001mnn.3 GeneCards:GC11M017767 HGNC:HGNC:17499 HPA:HPA037811
MIM:606051 neXtProt:NX_Q9UGK8 PharmGKB:PA143485610
InParanoid:Q9UGK8 PhylomeDB:Q9UGK8 GenomeRNAi:26297 NextBio:48643
ArrayExpress:Q9UGK8 Bgee:Q9UGK8 CleanEx:HS_SERGEF
Genevestigator:Q9UGK8 GermOnline:ENSG00000129158 Uniprot:Q9UGK8
Length = 458
Score = 128 (50.1 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 41/120 (34%), Positives = 62/120 (51%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WGAN+ GQLGLG +E L P+ + F + P +V +T G H+A++T D+
Sbjct: 18 FAWGANSYGQLGLGHKEDVLLPQQLNDFCK--PRSVRRITGGGGHSAVVTDG---GDLF- 71
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+C GL ++GQLG G T+ K L + V CG T +++ G V S G
Sbjct: 72 -VC---GLNKDGQLGLGHTEDIPYFTPCKSLFGCP-IQQVACGWDFTIMLTENGQVLSCG 126
Score = 119 (46.9 bits), Expect = 0.00055, P = 0.00055
Identities = 76/286 (26%), Positives = 117/286 (40%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSL-VSSFTPSPVWDFHGHT 128
P + + GG S + + G L++ C L G G + + FTP G
Sbjct: 48 PRSVRRITGGGGHSAVVTDGGDLFV---CGLNKDGQLGLGHTEDIPYFTPCK--SLFGCP 102
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQD 187
+ +VACG + + L T G+ L C G+N+ GQLG+ R + P+ IE +
Sbjct: 103 IQQVACGWDFTIML-----TENGQVLSC---GSNSFGQLGVPHGPRRCVVPQAIELHKEK 154
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ-LGHGTTQ----SALVPE 242
V + G H T + + W GL G+ L G T +A P
Sbjct: 155 ----VVCIAAGLRHAVAAT---ASGIVFQ---WGTGLASCGRRLCPGQTLPLFFTAKEPS 204
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+V L + + V G H++ ++ AG+V+ WG K + L NEA P
Sbjct: 205 RVTGL-ENSKAMCVLAGSDHSASLTDAGEVYVWGSNK------HGQLA-NEAAFLPVPQK 256
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
I H + + + G H V T+ G K+++WGR G LG
Sbjct: 257 IEA---HCFQNEKVTAIWSGWTHLVAQTETG-KMFTWGRADYGQLG 298
>UNIPROTKB|Q3MHW0 [details] [associations]
symbol:SERGEF "Secretion-regulating guanine nucleotide
exchange factor" species:9913 "Bos taurus" [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0050709 "negative regulation of protein
secretion" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=IEA] InterPro:IPR027048 INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0005737 GO:GO:0005730 GO:GO:0045111 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 GO:GO:0005085 PRINTS:PR00633
PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
eggNOG:COG5184 GeneTree:ENSGT00700000104160 EMBL:BC104610
IPI:IPI00689945 RefSeq:NP_001069489.1 UniGene:Bt.1247
ProteinModelPortal:Q3MHW0 STRING:Q3MHW0 PRIDE:Q3MHW0
Ensembl:ENSBTAT00000007022 GeneID:534377 KEGG:bta:534377 CTD:26297
HOGENOM:HOG000154414 HOVERGEN:HBG051746 InParanoid:Q3MHW0 KO:K15421
OMA:NIWAPKP OrthoDB:EOG4J1183 NextBio:20876380
PANTHER:PTHR22870:SF7 Uniprot:Q3MHW0
Length = 464
Score = 128 (50.1 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 38/120 (31%), Positives = 58/120 (48%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WGAN+ GQLGLG +E L + + F + + +T G H+A++T E
Sbjct: 18 FAWGANSYGQLGLGHKEDVLSAQQLSDFCKSG--CIKRITGGGGHSAVVTD--------E 67
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ GL ++GQLG G T+ L K L + V CG T +++ G V S G
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCA-IQQVACGWDFTIILTENGQVLSCG 126
>FB|FBgn0000247 [details] [associations]
symbol:ca "claret" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0017137 "Rab GTPase binding" evidence=IPI] [GO:0005622
"intracellular" evidence=IDA] [GO:0008057 "eye pigment granule
organization" evidence=IMP] [GO:0005085 "guanyl-nucleotide exchange
factor activity" evidence=IPI] [GO:0017112 "Rab guanyl-nucleotide
exchange factor activity" evidence=IPI] [GO:0060967 "negative
regulation of gene silencing by RNA" evidence=IMP]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE014297 Gene3D:2.130.10.30
InterPro:IPR009091 SUPFAM:SSF50985 PROSITE:PS50012 GO:GO:0008057
GO:GO:0060967 GO:GO:0006727 GO:GO:0006856
GeneTree:ENSGT00700000104208 FlyBase:FBgn0000247 EMBL:BT057978
RefSeq:NP_733309.3 UniGene:Dm.6851 SMR:Q9VAG5 MINT:MINT-1644098
STRING:Q9VAG5 EnsemblMetazoa:FBtr0085484 GeneID:43518
KEGG:dme:Dmel_CG31037 UCSC:CG31037-RA CTD:43518 InParanoid:Q9VAG5
OMA:DNTLHIV GenomeRNAi:43518 NextBio:834351 Uniprot:Q9VAG5
Length = 1961
Score = 116 (45.9 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 65/262 (24%), Positives = 105/262 (40%)
Query: 29 CCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTN--HKAPIKICSVKAGGMMSLA 86
C +DG F GS+ +P + P+ + + +++ ++K G +L
Sbjct: 1129 CVVDGTAYFWGSSG-IPSYYSAQKSTEPPEPAHAVKSLDLLSQLNLQVHAIKCGRQHTLI 1187
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
+ N G L+ GN L G + + P V G + + G H A V+ G
Sbjct: 1188 LTNNG-LYSLGNNNLCQLGI--GRHMQMALQPMLVTALDGMNITMLEAGQYHNAA-VADG 1243
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ Y WG GQLG G E+ P+++ F + +++ G HT +L
Sbjct: 1244 KLYM--------WGWGIYGQLGQGSCENIATPQLVSFFKFKK---ILQISLGHAHTLVLC 1292
Query: 207 HRKRPNDMLESM-C----WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL- 260
PN +E+ C + FG GQLG G + + LP V L DC L
Sbjct: 1293 GA--PNSHMEANHCGNELFVFGSNHFGQLGTGNSDHG---DTKTNLP--VRLEVGDCSLR 1345
Query: 261 -FHTSVVSS-AGD----VWSWG 276
HT ++ A D +++WG
Sbjct: 1346 LIHTKFFTNLAVDEQDRLFTWG 1367
Score = 70 (29.7 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 28/117 (23%), Positives = 56/117 (47%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAI-SPILISGNGPH 309
++ + GLFH ++SS+ +++WG +E LG T ++ A+ P I
Sbjct: 1503 ILQISSGLFHFCLISSSCTLYTWGKNLEHQLG-------TEDKDRRAVLKPSPIDS---- 1551
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT--GKTIDFFAPAIVLWP 364
+ P+ V CG+ T+++T D + + ++G +G G G +++ +V P
Sbjct: 1552 ---IERPMYVDCGSDFTLVMTTD-HVVRAFGGNSNGQCGRDLGPSVERMRQRVVCLP 1604
>UNIPROTKB|C9JRH2 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 OrthoDB:EOG4320Z9
IPI:IPI00927389 ProteinModelPortal:C9JRH2 SMR:C9JRH2 STRING:C9JRH2
Ensembl:ENST00000427469 ArrayExpress:C9JRH2 Bgee:C9JRH2
Uniprot:C9JRH2
Length = 230
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
>ZFIN|ZDB-GENE-040426-2216 [details] [associations]
symbol:rcc1 "regulator of chromosome condensation
1" species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 ZFIN:ZDB-GENE-040426-2216
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
eggNOG:COG5184 GeneTree:ENSGT00700000104160 KO:K11493 CTD:1104
HOGENOM:HOG000234341 HOVERGEN:HBG017712 OrthoDB:EOG4320Z9
HSSP:P18754 OMA:GTESCFV EMBL:CR855299 EMBL:BC059796 EMBL:BC066721
IPI:IPI00511389 RefSeq:NP_998343.1 UniGene:Dr.77012 SMR:Q6NY65
STRING:Q6NY65 Ensembl:ENSDART00000054026 GeneID:406457
KEGG:dre:406457 InParanoid:Q6NY65 NextBio:20818049 Uniprot:Q6NY65
Length = 418
Score = 126 (49.4 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 66/239 (27%), Positives = 100/239 (41%)
Query: 58 DSLEDDSKT-NHKAPI--KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
D+ E+ S+T K + KI V AG S A+ G +++WG+ D++ G
Sbjct: 102 DTSEEGSETVPAKVDLGEKIIQVSAGDSHSAALTEDGGVYVWGS--FRDNNGVIGLLEPM 159
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK---GED----LVCYSWGANNNGQL 167
PV VVK+ G++H+V L + GE Y GE V + AN G+
Sbjct: 160 KKCTVPVKVPIDKPVVKIVSGNDHLVMLTAHGELYTSGCGEQGQLGRVAEHF-ANRGGRK 218
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
GL L P+++ +V CG++ T ++ E + FGL
Sbjct: 219 GL---MRLLEPQMV-IIKPRGKVVFTDVFCGAYFTFAVSK--------EGHVYGFGLSNY 266
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGL 283
QLG +T + VP ++ V G HT ++S G +S G E G LGL
Sbjct: 267 HQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYSLGRAEYGRLGL 325
Score = 125 (49.1 bits), Expect = 0.00010, P = 0.00010
Identities = 50/176 (28%), Positives = 75/176 (42%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWS 274
E + FGL QLG +T + VP ++ V G HT ++S G +S
Sbjct: 255 EGHVYGFGLSNYHQLGTQSTNTCFVPVKLSSFKNSTTSWVGFSGGQHHTLCLNSEGKAYS 314
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
G E G LGL + G+ P ++ G D VACGA+ + VT
Sbjct: 315 LGRAEYGRLGL-------GKDVGEKSEPTVVPG-------ISDVQVVACGASVSYAVTKQ 360
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKD 388
G ++SWG G + LGTG+ D ++P + L +++GG + KD
Sbjct: 361 G-SVFSWGMGTNLQLGTGEEEDEWSPVEMTGKQLENRVVLS-VSSGGQHTVLLVKD 414
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 61/221 (27%), Positives = 93/221 (42%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNC----PLP-DSSTEGGFSLVSSFTPSPVWDFH 125
P I AGGM ++ + + G ++ +G C L D+S EG S P+ V D
Sbjct: 66 PEGIVQAVAGGMHTVCLSDTGNVYTFG-CNDEGALGRDTSEEG-----SETVPAKV-DL- 117
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIET 183
G +++V+ G H AL ED Y WG+ +NNG +GL + + +
Sbjct: 118 GEKIIQVSAGDSHSAALT--------EDGGVYVWGSFRDNNGVIGLLEPMKKCTVPVKVP 169
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG-LGENGQL-----GHGTTQS 237
D P V ++ G+ H +LT ++ S C G LG + G
Sbjct: 170 I--DKP--VVKIVSGNDHLVMLTAH---GELYTSGCGEQGQLGRVAEHFANRGGRKGLMR 222
Query: 238 ALVPEQVKELPQ-YVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
L P+ V P+ V V CG + T VS G V+ +G+
Sbjct: 223 LLEPQMVIIKPRGKVVFTDVFCGAYFTFAVSKEGHVYGFGL 263
Score = 117 (46.2 bits), Expect = 0.00079, P = 0.00079
Identities = 58/221 (26%), Positives = 95/221 (42%)
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCG 198
V+ +S G+ KG LV G + GQLGLG D R +P ++ P + + G
Sbjct: 25 VSHISHGQE-KGLVLVL---GQGDVGQLGLGEDVMERKKPALVTL-----PEGIVQAVAG 75
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYVYLVSV 256
HT L+ +TFG + G LG T++ S VP +V +L + + + V
Sbjct: 76 GMHTVCLSDTGN--------VYTFGCNDEGALGRDTSEEGSETVPAKV-DLGEKI--IQV 124
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
G H++ ++ G V+ WG + N + P+ P +
Sbjct: 125 SAGDSHSAALTEDGGVYVWGSFRD----------NNGVIGLLEPMKKCTVPVKVPIDKPV 174
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
V++ G H V++T G +L++ G G G LG + + FA
Sbjct: 175 VKIVSGNDHLVMLTAHG-ELYTSGCGEQGQLG--RVAEHFA 212
>UNIPROTKB|C9JMJ4 [details] [associations]
symbol:RCC1 "Regulator of chromosome condensation"
species:9606 "Homo sapiens" [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0031965 "nuclear
membrane" evidence=IDA] INTERPRO:IPR000408 Pfam:PF00415
GO:GO:0031965 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00625 PROSITE:PS00626 PROSITE:PS50012
EMBL:AL513497 HGNC:HGNC:1913 HOGENOM:HOG000234341 IPI:IPI00925317
ProteinModelPortal:C9JMJ4 SMR:C9JMJ4 STRING:C9JMJ4
Ensembl:ENST00000419074 ArrayExpress:C9JMJ4 Bgee:C9JMJ4
Uniprot:C9JMJ4
Length = 272
Score = 121 (47.7 bits), Expect = 0.00012, P = 0.00012
Identities = 42/146 (28%), Positives = 68/146 (46%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S +G V+S+G L + S+ +E ++ G K VQV+ G +
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDS 129
Query: 325 HTVLVTDDGYKLWSWG--RGRSGVLG 348
HT +TDDG +++ WG R +GV+G
Sbjct: 130 HTAALTDDG-RVFLWGSFRDNNGVIG 154
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 61/226 (26%), Positives = 93/226 (41%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHT 128
P + +AGGM ++ + +G ++ +G C D G + V S P V +
Sbjct: 66 PEDVVQAEAGGMHTVCLSKSGQVYSFG-CN--DEGALGRDTSVEGSEMVPGKV-ELQ-EK 120
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGA--NNNGQLGLGDRESRLRPKIIETFNQ 186
VV+V+ G H AL G + WG+ +NNG +GL E + +
Sbjct: 121 VVQVSAGDSHTAALTDDGRVFL--------WGSFRDNNGVIGL--LEPMKKSMVPVQVQL 170
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--------GTTQSA 238
D P V +V G+ H +LT D+ +T G GE GQLG G Q
Sbjct: 171 DVP--VVKVASGNDHLVMLT---ADGDL-----YTLGCGEQGQLGRVPELFANRGGRQGL 220
Query: 239 ---LVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
LVP+ V + +V CG + T +S G V+ +G+
Sbjct: 221 ERLLVPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGL 266
>UNIPROTKB|Q83CB0 [details] [associations]
symbol:CBU_1217 "Hypothetical membrane spanning protein"
species:227377 "Coxiella burnetii RSA 493" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
INTERPRO:IPR000408 Pfam:PF00415 EMBL:AE016828
GenomeReviews:AE016828_GR Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG
RefSeq:NP_820212.1 ProteinModelPortal:Q83CB0 GeneID:1209121
KEGG:cbu:CBU_1217 PATRIC:17931169 HOGENOM:HOG000029001
ProtClustDB:CLSK914618 BioCyc:CBUR227377:GJ7S-1203-MONOMER
Uniprot:Q83CB0
Length = 497
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 65/257 (25%), Positives = 107/257 (41%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII--ET 183
G +V++ ++VA + G Y WG N G+LGL D + RL P + +
Sbjct: 236 GDRIVQLNFADRYLVARTAQGHVYV--------WGFNYRGRLGLDDEQDRLHPVELSWDF 287
Query: 184 FNQDSPWA-VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS----A 238
F + P + +V G HT LT + +G GQLG Q A
Sbjct: 288 FPEWHPDDYIIQVVVGDRHTLALTQL--------GYIYAWGKNSYGQLGFRDQQDRNRPA 339
Query: 239 LVPEQVKE--LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
L+P L + ++ + G + + G ++ WG + L L R +
Sbjct: 340 LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA-RWL-------LVRGDPEF 391
Query: 297 AISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P+L++ N G + + V++ G HT+ T+ GY +++WGR G LG G
Sbjct: 392 RHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGY-IYAWGRNYYGQLGLGDRRI 450
Query: 355 FFAPAIV---LWPPLTE 368
PA++ PPL++
Sbjct: 451 QRQPALLDPNAIPPLSQ 467
>TIGR_CMR|CBU_1217 [details] [associations]
symbol:CBU_1217 "hypothetical protein" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] INTERPRO:IPR000408
Pfam:PF00415 EMBL:AE016828 GenomeReviews:AE016828_GR
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS50012 OMA:GYIYAWG RefSeq:NP_820212.1
ProteinModelPortal:Q83CB0 GeneID:1209121 KEGG:cbu:CBU_1217
PATRIC:17931169 HOGENOM:HOG000029001 ProtClustDB:CLSK914618
BioCyc:CBUR227377:GJ7S-1203-MONOMER Uniprot:Q83CB0
Length = 497
Score = 124 (48.7 bits), Expect = 0.00018, P = 0.00018
Identities = 65/257 (25%), Positives = 107/257 (41%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII--ET 183
G +V++ ++VA + G Y WG N G+LGL D + RL P + +
Sbjct: 236 GDRIVQLNFADRYLVARTAQGHVYV--------WGFNYRGRLGLDDEQDRLHPVELSWDF 287
Query: 184 FNQDSPWA-VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS----A 238
F + P + +V G HT LT + +G GQLG Q A
Sbjct: 288 FPEWHPDDYIIQVVVGDRHTLALTQL--------GYIYAWGKNSYGQLGFRDQQDRNRPA 339
Query: 239 LVPEQVKE--LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
L+P L + ++ + G + + G ++ WG + L L R +
Sbjct: 340 LLPWNRFPGLLERNDRIIELIAGGARSLARTEQGFIYIWGA-RWL-------LVRGDPEF 391
Query: 297 AISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P+L++ N G + + V++ G HT+ T+ GY +++WGR G LG G
Sbjct: 392 RHHPMLLTENYFPGLRRRGDHLVELIAGPDHTLARTEQGY-IYAWGRNYYGQLGLGDRRI 450
Query: 355 FFAPAIV---LWPPLTE 368
PA++ PPL++
Sbjct: 451 QRQPALLDPNAIPPLSQ 467
>RGD|1312048 [details] [associations]
symbol:Mycbp2 "MYC binding protein 2, E3 ubiquitin protein
ligase" species:10116 "Rattus norvegicus" [GO:0004842
"ubiquitin-protein ligase activity" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=ISO] [GO:0015630 "microtubule
cytoskeleton" evidence=ISO] [GO:0021785 "branchiomotor neuron axon
guidance" evidence=ISO] [GO:0021952 "central nervous system
projection neuron axonogenesis" evidence=ISO] [GO:0030424 "axon"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0048667 "cell morphogenesis involved in neuron
differentiation" evidence=ISO] [GO:0051493 "regulation of
cytoskeleton organization" evidence=ISO] InterPro:IPR027047
RGD:1312048 INTERPRO:IPR000408 Pfam:PF00415 Gene3D:2.60.40.10
InterPro:IPR013783 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 InterPro:IPR014756 SUPFAM:SSF81296 PRINTS:PR00633
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR012983 Pfam:PF08005
InterPro:IPR017868 Pfam:PF00630 PROSITE:PS50194 EMBL:CH473951
PANTHER:PTHR12846 IPI:IPI00950595 UniGene:Rn.13538
Ensembl:ENSRNOT00000064927 UCSC:RGD:1312048 Uniprot:D4A722
Length = 2667
Score = 109 (43.4 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 33/91 (36%), Positives = 47/91 (51%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V+CG H+ +L D+ +TFG G++GQLGHG S P V+ LP
Sbjct: 920 QVSCGFHHSVVLMEN---GDV-----YTFGYGQHGQLGHGDVNSRGCPTLVQALPGPS-- 969
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG-MEKG-LG 282
V G HT+V+ G V+++G KG LG
Sbjct: 970 TQVTAGSNHTAVLVMDGQVFTFGSFSKGQLG 1000
Score = 83 (34.3 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 31/97 (31%), Positives = 43/97 (44%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I +C+ G S+ I G L+M+G + S+ SLVS D GH V +
Sbjct: 615 IVVCTACNNGSSSV-ISKDGELYMFGKDAIYSDSS----SLVS--------DLKGHFVTQ 661
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
VA G H L+ GE + ++G NN GQ G
Sbjct: 662 VAMGKAHTCVLMKNGEVW--------TFGVNNKGQCG 690
Score = 37 (18.1 bits), Expect = 0.00032, Sum P(3) = 0.00032
Identities = 11/43 (25%), Positives = 16/43 (37%)
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+F P + V +DG +W G G+ TID
Sbjct: 2329 RFASPTPKRPSENMLIRVNNDGTYCANWTPGAIGLYTVHVTID 2371
>FB|FBgn0030600 [details] [associations]
symbol:hiw "highwire" species:7227 "Drosophila melanogaster"
[GO:0008582 "regulation of synaptic growth at neuromuscular
junction" evidence=IMP;TAS] [GO:0016023 "cytoplasmic
membrane-bounded vesicle" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0007628 "adult walking behavior"
evidence=NAS] [GO:0040011 "locomotion" evidence=NAS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030514 "negative regulation
of BMP signaling pathway" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0045886 "negative regulation of synaptic
growth at neuromuscular junction" evidence=IMP] [GO:0030509 "BMP
signaling pathway" evidence=IPI] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0004842 "ubiquitin-protein ligase
activity" evidence=ISS] [GO:0006914 "autophagy" evidence=IDA]
[GO:0050808 "synapse organization" evidence=IDA] InterPro:IPR001841
InterPro:IPR027047 PROSITE:PS50089 SMART:SM00184
UniPathway:UPA00143 INTERPRO:IPR000408 Pfam:PF00415 Prosite:PS00518
GO:GO:0005886 GO:GO:0005634 Gene3D:2.60.40.10 InterPro:IPR013783
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 GO:GO:0006914
GO:GO:0040011 GO:GO:0050808 GO:GO:0006351 GO:GO:0016023
GO:GO:0045886 Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
GO:GO:0030509 Gene3D:3.30.40.10 InterPro:IPR014756
InterPro:IPR013083 SUPFAM:SSF81296 InterPro:IPR008979
SUPFAM:SSF49785 GO:GO:0004842 PRINTS:PR00633 PROSITE:PS00625
PROSITE:PS00626 PROSITE:PS50012 InterPro:IPR004939 PROSITE:PS51284
GO:GO:0007628 eggNOG:COG5184 GO:GO:0030514 InterPro:IPR012983
Pfam:PF08005 InterPro:IPR017868 PROSITE:PS50194 EMBL:AF262977
EMBL:AY113376 RefSeq:NP_511159.3 UniGene:Dm.3259
ProteinModelPortal:Q9NB71 SMR:Q9NB71 IntAct:Q9NB71 STRING:Q9NB71
EnsemblMetazoa:FBtr0073970 GeneID:32429 KEGG:dme:Dmel_CG32592
UCSC:CG32592-RA CTD:32429 FlyBase:FBgn0030600
GeneTree:ENSGT00390000011403 InParanoid:Q9NB71 KO:K10693
OMA:DAQCQEY OrthoDB:EOG4ZPC91 PhylomeDB:Q9NB71 ChiTaRS:hiw
GenomeRNAi:32429 NextBio:778423 Bgee:Q9NB71 GermOnline:CG32592
PANTHER:PTHR12846 Uniprot:Q9NB71
Length = 5233
Score = 121 (47.7 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 44/141 (31%), Positives = 69/141 (48%)
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R + L P++++ SP V +V CG HT +LT L +TFG + GQLG
Sbjct: 951 RVAPLAPQLLQ-LTSSSP--VVQVACGLHHTVVLT--------LAGEVYTFGSNQYGQLG 999
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASL 289
G Q P +V ++P + V+ G HT +++S G V+++G +KG LG P+
Sbjct: 1000 SGDLQPVSGPVRV-QVPGAISQVAA--GSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYG 1056
Query: 290 TRNEAGDAISPILISGNGPHG 310
+ D SP+ +G G
Sbjct: 1057 LKPPPQDDDSPVGAGSDGGAG 1077
Score = 62 (26.9 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 17/40 (42%), Positives = 21/40 (52%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
V KVA G H VAL + G+ + S+G NN GQ G
Sbjct: 752 VTKVALGKAHCVALNAKGQLF--------SFGLNNKGQCG 783
Score = 53 (23.7 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 19/69 (27%), Positives = 37/69 (53%)
Query: 410 QSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSK---L 466
+SK ++ +R+ L+G I K AE I + ++D+ ++++W + ++A L
Sbjct: 4705 ESKRNLNQRW--FLNGVISTKQ--AESIISL-IRDLASGKLSEKWSQITKAAIAESVLNL 4759
Query: 467 VRLERFYRN 475
RLE YR+
Sbjct: 4760 TRLEEIYRS 4768
Score = 44 (20.5 bits), Expect = 0.00057, Sum P(4) = 0.00057
Identities = 13/47 (27%), Positives = 19/47 (40%)
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT-GKTIDFFA 357
KF PV + A + + + G + S G V G G F+A
Sbjct: 2101 KFDHPVHIKENARYALRLCSQGARTCSGDAGMPAVRGPCGAQFHFYA 2147
>FB|FBgn0031769 [details] [associations]
symbol:CG9135 species:7227 "Drosophila melanogaster"
[GO:0005085 "guanyl-nucleotide exchange factor activity"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
[GO:0005875 "microtubule associated complex" evidence=IDA]
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005875 EMBL:AE014134
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 eggNOG:COG5184
GeneTree:ENSGT00700000104160 OMA:FGENKLG EMBL:AY058682
EMBL:AM294309 EMBL:AM294310 EMBL:AM294311 EMBL:AM294312
EMBL:AM294313 EMBL:AM294314 EMBL:AM294315 EMBL:AM294316
EMBL:AM294317 EMBL:AM294318 EMBL:FM245376 EMBL:FM245377
EMBL:FM245378 EMBL:FM245379 EMBL:FM245380 EMBL:FM245381
EMBL:FM245382 EMBL:FM245383 EMBL:FM245384 EMBL:FM245385
EMBL:FM245386 EMBL:FM245387 RefSeq:NP_608985.1 RefSeq:NP_723150.1
UniGene:Dm.4234 HSSP:P18754 SMR:Q9VMI5 IntAct:Q9VMI5
MINT:MINT-744911 STRING:Q9VMI5 EnsemblMetazoa:FBtr0079185
EnsemblMetazoa:FBtr0079186 GeneID:33850 KEGG:dme:Dmel_CG9135
UCSC:CG9135-RA FlyBase:FBgn0031769 InParanoid:Q9VMI5
OrthoDB:EOG4QV9T7 ChiTaRS:CG9135 GenomeRNAi:33850 NextBio:785598
Uniprot:Q9VMI5
Length = 487
Score = 119 (46.9 bits), Expect = 0.00060, P = 0.00060
Identities = 69/267 (25%), Positives = 110/267 (41%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVCYSWGANNNGQLGLG- 170
V+ P+ ++ FH T K +V + SA T D +G N +GQLGL
Sbjct: 98 VTKVRPN-LYSFHRFTEEKY----RYVASGPSAAHTILINMDRKALGFGRNPSGQLGLSQ 152
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
D + +P II Q + + + G HT LT + G ++GQ
Sbjct: 153 DIKLAEKPTIIPALEQLN---IVQAAVGRHHTLFLTDT--------GTVYACGENKSGQC 201
Query: 231 GHGTTQSAL---VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP 285
G G T + + P + P ++ + CG + ++ G + ++G+ E G LG
Sbjct: 202 GVGNTHANIYSPTPINYRGPP----IIRIGCGAEFSVILDIKGSLHTFGLPEYGQLGHNT 257
Query: 286 NAS--LTRNEAGDAI--SP---ILISGNGPHGPKFQ-DPVQV---ACGAAHTVLVTDDGY 334
+A + N+ SP +L G D VQ+ ACG HTV + D
Sbjct: 258 DAKYFVNANKLSFHFETSPKKVVLYIEKSKEGHVTPVDGVQIVDFACGNNHTVAI-DSKK 316
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++SWG G G LG + D P ++
Sbjct: 317 RVYSWGFGGFGRLGHAEPKDEMVPRLM 343
>ASPGD|ASPL0000042168 [details] [associations]
symbol:AN2073 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0000151
"ubiquitin ligase complex" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR002110
InterPro:IPR000210 InterPro:IPR013069 Pfam:PF00651 PROSITE:PS50097
SMART:SM00225 SMART:SM00248 INTERPRO:IPR000408 EMBL:BN001307
Gene3D:1.25.40.20 InterPro:IPR020683 SUPFAM:SSF48403
PROSITE:PS50297 Gene3D:3.30.710.10 InterPro:IPR011333
SUPFAM:SSF54695 Gene3D:2.130.10.30 InterPro:IPR009091
SUPFAM:SSF50985 EMBL:AACD01000032 PRINTS:PR00633 PROSITE:PS50012
eggNOG:COG5184 OrthoDB:EOG42VCR5 RefSeq:XP_659677.1
ProteinModelPortal:Q5BBK7 EnsemblFungi:CADANIAT00008743
GeneID:2875213 KEGG:ani:AN2073.2 HOGENOM:HOG000182979 OMA:DRLSQIC
Uniprot:Q5BBK7
Length = 1680
Score = 115 (45.5 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 51/175 (29%), Positives = 78/175 (44%)
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG--TTQSA 238
+ F + P + + HTA+LT D ES + G G G+LG G +T+ +
Sbjct: 414 LPAFIKARPLKIQTLAMSKLHTAILT------DDPESNLFICGFGPGGRLGTGDESTRFS 467
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEA 294
V + L + SV G HT ++ GD++SWG K G GL P A N
Sbjct: 468 FVCIEGGGLANKK-VASVALGQDHTLAITEHGDIFSWGSNKFGQLGYGL-PRA----NNK 521
Query: 295 GDAISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
D P+ +S P K + + A A H+V+ + G L+++G+ G LG
Sbjct: 522 DDV--PVQLSPRQIFNPFKKEVILGAAASAVHSVVYSTSG--LYTFGKNE-GQLG 571
Score = 60 (26.2 bits), Expect = 0.00064, Sum P(2) = 0.00064
Identities = 20/74 (27%), Positives = 37/74 (50%)
Query: 111 SLVSSFTPSPVWDFHG-HTVVKVACGSEHVVA--LVSAGETYKGEDLVCYSWGANNNGQL 167
S ++S + P+ HG V+ + VA L G+++ +++G+N N L
Sbjct: 307 STITSRSLGPLVPDHGLDDASSVSSSDDEDVAEALEKPSTNLFGDEV--FTFGSNKNLNL 364
Query: 168 GLGDRESRLRPKII 181
G+GD++ R P+ I
Sbjct: 365 GVGDQDDRQYPERI 378
>UNIPROTKB|F1NXI5 [details] [associations]
symbol:SERGEF "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] [GO:0050709 "negative regulation of
protein secretion" evidence=IEA] InterPro:IPR027048
INTERPRO:IPR000408 Pfam:PF00415 GO:GO:0005730 GO:GO:0045111
Gene3D:2.130.10.30 InterPro:IPR009091 SUPFAM:SSF50985
PRINTS:PR00633 PROSITE:PS00626 PROSITE:PS50012 GO:GO:0050709
GeneTree:ENSGT00700000104160 PANTHER:PTHR22870:SF7
EMBL:AADN02030419 EMBL:AADN02030421 EMBL:AADN02030420
IPI:IPI00682810 Ensembl:ENSGALT00000010072 OMA:PIELDIT
Uniprot:F1NXI5
Length = 382
Score = 117 (46.2 bits), Expect = 0.00068, P = 0.00068
Identities = 64/225 (28%), Positives = 89/225 (39%)
Query: 132 VACGSEHVVALVSAGE-----TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V+C + + ++ G T GE VC G N GQLGL E L +
Sbjct: 25 VSCKCQDIKSIAGGGGHSAVITGAGELFVC---GHNKAGQLGLNHTEDVLCFTLCTAL-- 79
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVK 245
S + V EV CG T +L R +L C G GQLG L+P+++K
Sbjct: 80 -SGFCVQEVACGWDFTIILG---RAGLVLS--C---GSNAFGQLGVPQISGPCLIPQKIK 130
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L + V + GL H + +G V+ WG G+ A R G + P+ +
Sbjct: 131 SLKEKA--VGIAAGLRHALAATESGLVFQWGT----GMASRAK--RVHQGKTL-PVFWAA 181
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
P K V QV+ A T L T L+ WG + G L
Sbjct: 182 KEPCEIKGNPGVLLCQVSLSAYLTSLSTAGEGHLYVWGSNKHGQL 226
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.429 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 504 504 0.00085 119 3 11 22 0.40 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 182
No. of states in DFA: 626 (67 KB)
Total size of DFA: 332 KB (2166 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 43.91u 0.08s 43.99t Elapsed: 00:00:02
Total cpu time: 44.07u 0.08s 44.15t Elapsed: 00:00:03
Start: Sat May 11 03:06:31 2013 End: Sat May 11 03:06:34 2013
WARNINGS ISSUED: 1