BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010683
(504 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359476350|ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
Length = 564
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 336/476 (70%), Positives = 386/476 (81%), Gaps = 13/476 (2%)
Query: 28 NCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI 87
N C+ S N LVP ++E FL +G+ SL D+S T +K P+K+ +VKAGGMMSLAI
Sbjct: 101 NSCI-----LSDDNCLVPHLLELFLGLGSLGSLTDESDTKNKTPLKVNAVKAGGMMSLAI 155
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
DN G LWMWGN P S +G FSLVSSFTP PVWDFHGHTVVKVACG+EHVVALVS GE
Sbjct: 156 DNLGGLWMWGNVP-ESSPDKGEFSLVSSFTPIPVWDFHGHTVVKVACGNEHVVALVSHGE 214
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
TYKG DL+CYSWG N +GQLGLGD E+RLRP++++TFN +S W VYEV CG+FHTALLTH
Sbjct: 215 TYKGGDLICYSWGNNGHGQLGLGDTENRLRPEVVKTFNLESLWEVYEVACGAFHTALLTH 274
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+KRP+D LESMCWTFGLG+NGQLGHGTT+ +PE VK+LP++ +LVSVDCGLFHTSVVS
Sbjct: 275 KKRPSDTLESMCWTFGLGDNGQLGHGTTKGISLPEPVKDLPEHRFLVSVDCGLFHTSVVS 334
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
SAG+VWSWGMEKGLGLCP+AS T + GDA SP+L +G KF+DPVQVACGAAHTV
Sbjct: 335 SAGEVWSWGMEKGLGLCPDASFTGTDPGDAPSPLL------YGSKFRDPVQVACGAAHTV 388
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTK 387
LV DDGYKLWSWGRGRSGVLG GKT+D FAP+ VLWPPLTE+FK+ E T + +I+ K
Sbjct: 389 LVADDGYKLWSWGRGRSGVLGNGKTVDCFAPSTVLWPPLTEDFKELESGTTSGEKKIENK 448
Query: 388 DLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGF 447
D E E +++LS A EEMKLL SKLS MERYASILHGSIFGKPF EQDIPISL++ GF
Sbjct: 449 DPEEVTEMEKRLSLATEEMKLLHSKLSTMERYASILHGSIFGKPF-EEQDIPISLQNSGF 507
Query: 448 FDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIG 503
FDI KEWENMLESADR KLV LE+FYRNMLAGVKDKLMKRRIQEI+ ECL G
Sbjct: 508 FDIAKEWENMLESADRGKLVMLEKFYRNMLAGVKDKLMKRRIQEIIKECLPPPATG 563
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 89/264 (33%), Gaps = 63/264 (23%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP---KIIETFN 185
+V VA G H + L G Y SWG G+LG G L P K
Sbjct: 17 IVSVAAGEAHSLVLTGDGRVY--------SWGRGTFGRLGTGSEADELFPVPIKFDSAEK 68
Query: 186 QDSPWAVY-EVTCGSFHTALLTHRKRPNDMLESMCWTF--------------------GL 224
DS + + G++H+ L D CW + GL
Sbjct: 69 SDSKGVKFVGIAAGAYHSVALA------DDGTVWCWGYNSCILSDDNCLVPHLLELFLGL 122
Query: 225 GENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLC 284
G G L + P +V +V G + + + G +W WG
Sbjct: 123 GSLGSLTDESDTKNKTPLKVN---------AVKAGGMMSLAIDNLGGLWMWGN------V 167
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG--YK-----LW 337
P +S + E S I HG V+VACG H V + G YK +
Sbjct: 168 PESSPDKGEFSLVSSFTPIPVWDFHG---HTVVKVACGNEHVVALVSHGETYKGGDLICY 224
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIV 361
SWG G LG G T + P +V
Sbjct: 225 SWGNNGHGQLGLGDTENRLRPEVV 248
>gi|255550918|ref|XP_002516507.1| Protein pim1, putative [Ricinus communis]
gi|223544327|gb|EEF45848.1| Protein pim1, putative [Ricinus communis]
Length = 565
Score = 677 bits (1748), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/464 (71%), Positives = 377/464 (81%), Gaps = 8/464 (1%)
Query: 41 NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCP 100
N+ VP ++EQF + P S ++S+TN + P+K+CSVKAGGMMSLAIDN GALWMWGNCP
Sbjct: 110 NAAVPRMMEQFHELIYPGSATNESETNREVPLKVCSVKAGGMMSLAIDNLGALWMWGNCP 169
Query: 101 LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG 160
+S E GFSLVSSFTP PVWDF+GHTVVKVACG+EHVVALVS GETYKGEDL+CYSWG
Sbjct: 170 QQNS--ESGFSLVSSFTPIPVWDFYGHTVVKVACGNEHVVALVSEGETYKGEDLLCYSWG 227
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
NN+GQLGLGD ESR+ P+I+ETFNQDSPWAVYEV+CG+FHTALLT +KRPND L+S CW
Sbjct: 228 NNNHGQLGLGDTESRVCPEIVETFNQDSPWAVYEVSCGAFHTALLTCKKRPNDKLQSTCW 287
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
TFGLGENGQLG GTTQ+AL PE VKELP+Y YL+SVDCGLFHTSVVSSAGDVWSWGM G
Sbjct: 288 TFGLGENGQLGLGTTQNALKPEPVKELPEYAYLISVDCGLFHTSVVSSAGDVWSWGMMNG 347
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
LGLCP+A T +AGDAISP+LI+G KF DPVQ+ CGAAHTVLVT+ GYKLWSWG
Sbjct: 348 LGLCPDARFTGTDAGDAISPLLITGT-----KFNDPVQITCGAAHTVLVTNGGYKLWSWG 402
Query: 341 RGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLS 400
RGRSG LG GK ID P ++LWPPLTE K E N +D + K E E + KLS
Sbjct: 403 RGRSGALGNGKEIDVLVPGVMLWPPLTEVVKNQESNNSVEEDNLVKKGSEEVTEMENKLS 462
Query: 401 SAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLES 460
AMEEMKLLQSKL++MERYA ILHGSIFGKPF AE D+PISL++ FDI K WE MLES
Sbjct: 463 LAMEEMKLLQSKLTIMERYAGILHGSIFGKPF-AEDDLPISLQNSDTFDIAKAWEEMLES 521
Query: 461 ADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
ADRSKL+RLE FYRNMLAGVKDK MKRRIQEI+ E L S T GK
Sbjct: 522 ADRSKLIRLEIFYRNMLAGVKDKKMKRRIQEIIQEYLPSVTPGK 565
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 104/278 (37%), Gaps = 74/278 (26%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-----KIIET 183
VV VA G H +AL G YSWG G+LG G + L P + E
Sbjct: 18 VVSVAAGEAHTLALTGDG--------CVYSWGRGTFGRLGTGLEKDELYPVKVKFDMCEE 69
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
F ++ + G++H+ L D CW + + ++A VP
Sbjct: 70 F-EERKLKFVGIAAGAYHSVALA------DDGSVWCWGY------NICILDPENAAVPRM 116
Query: 244 VKELPQYVY-----------------LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
+++ + +Y + SV G + + + G +W WG CP
Sbjct: 117 MEQFHELIYPGSATNESETNREVPLKVCSVKAGGMMSLAIDNLGALWMWGN------CPQ 170
Query: 287 ASLTRNEAG----DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG--YK----- 335
+ +E+G + +PI + H V+VACG H V + +G YK
Sbjct: 171 QN---SESGFSLVSSFTPIPVWDFYGH-----TVVKVACGNEHVVALVSEGETYKGEDLL 222
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQD 373
+SWG G LG G T P IV E F QD
Sbjct: 223 CYSWGNNNHGQLGLGDTESRVCPEIV------ETFNQD 254
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 376
V VA G AHT+ +T DG ++SWGRG G LGTG D P V + + EEF++ +L
Sbjct: 19 VSVAAGEAHTLALTGDGC-VYSWGRGTFGRLGTGLEKDELYPVKVKF-DMCEEFEERKLK 76
Query: 377 TGGL 380
G+
Sbjct: 77 FVGI 80
>gi|296081841|emb|CBI20846.3| unnamed protein product [Vitis vinifera]
Length = 441
Score = 665 bits (1715), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 332/474 (70%), Positives = 376/474 (79%), Gaps = 33/474 (6%)
Query: 31 MDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
MDGQLGFS N LVP ++E FL +G+ SL D+S T +K P+K+ +VKAGGMMSLAIDN
Sbjct: 1 MDGQLGFSDDNCLVPHLLELFLGLGSLGSLTDESDTKNKTPLKVNAVKAGGMMSLAIDNL 60
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G LWMWGN P S +G FSLVSSFTP PVWDFHGHTVVKVACG+EHVVALVS GETYK
Sbjct: 61 GGLWMWGNVP-ESSPDKGEFSLVSSFTPIPVWDFHGHTVVKVACGNEHVVALVSHGETYK 119
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
G DL+CYSWG N +GQLGLGD E+RLRP++++TFN +S W VYEV CG+FHTALLTH+KR
Sbjct: 120 GGDLICYSWGNNGHGQLGLGDTENRLRPEVVKTFNLESLWEVYEVACGAFHTALLTHKKR 179
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
P+D LESMCWTFGLG+NGQLGHGTT+ +PE VK+LP++ +LVSVDCGLFHTSVVSSAG
Sbjct: 180 PSDTLESMCWTFGLGDNGQLGHGTTKGISLPEPVKDLPEHRFLVSVDCGLFHTSVVSSAG 239
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+VWSWGMEKGLGLCP+AS T + GDA SP+L +G KF+DPVQVACGAAHTVLV
Sbjct: 240 EVWSWGMEKGLGLCPDASFTGTDPGDAPSPLL------YGSKFRDPVQVACGAAHTVLVA 293
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
DDGYKLWSWGRGRSGVLG GKT+D FAP+ VLWPPLTE+FK+ E
Sbjct: 294 DDGYKLWSWGRGRSGVLGNGKTVDCFAPSTVLWPPLTEDFKELE---------------- 337
Query: 391 GAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI 450
S +EMKLL SKLS MERYASILHGSIFGKPF EQDIPISL++ GFFDI
Sbjct: 338 ---------SGTTKEMKLLHSKLSTMERYASILHGSIFGKPF-EEQDIPISLQNSGFFDI 387
Query: 451 TKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
KEWENMLESADR KLV LE+FYRNMLAGVKDKLMKRRIQEI+ ECL G
Sbjct: 388 AKEWENMLESADRGKLVMLEKFYRNMLAGVKDKLMKRRIQEIIKECLPPPATGN 441
>gi|449461323|ref|XP_004148391.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 571
Score = 664 bits (1712), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 315/470 (67%), Positives = 376/470 (80%), Gaps = 2/470 (0%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF G NS PC+++QFL + P+SL ++S + K +KIC +KAGG +S AID+ GA
Sbjct: 100 GQLGFDGGNSATPCLLKQFLELEPPESLTEESGSKSKGSLKICDIKAGGQISFAIDDLGA 159
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY-KG 151
LWMWGNCP P E G S VSSFTPSPVW+FHGHTVVKVACG+EH+VALVS GETY K
Sbjct: 160 LWMWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKA 219
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
EDLVCYSWG N++GQLGLGD++SR P+IIETFN+ SPWAVYEV CG+FHTALL+H KRP
Sbjct: 220 EDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRP 279
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
D LES+CWTFGLGENGQLGHGTTQ+ +P+ VKELPQ V L+SV CGLFHTSVVSS GD
Sbjct: 280 CDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGD 339
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WSWGME+GLGLCP+AS T GDAISP+ I +G PKF DPVQVACGAAHTV+V
Sbjct: 340 LWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAH 399
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEG 391
DGYKLWSWGRGRSGVLG GK +D F P +VLWPPL E+F Q+E T +D+++ +E
Sbjct: 400 DGYKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKIEE 459
Query: 392 AEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDIT 451
E ++KL AMEE+KLL KLS+MERYAS LHGSIFGKPF E DIP+SL++ G FDI
Sbjct: 460 VTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPF-QEGDIPLSLRNSGSFDIA 518
Query: 452 KEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSST 501
KEWE+MLES+DRS L+RLE Y+NMLA +KDK++K+R+QE+V E L S+T
Sbjct: 519 KEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 568
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 76/299 (25%), Positives = 132/299 (44%), Gaps = 48/299 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS----LVSSF----TPSPVWD 123
+K+ ++ AG SLA+ + G++W WG +GG S L+ F P + +
Sbjct: 70 LKVVAIAAGSYHSLALTDDGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTE 129
Query: 124 FHGHTVVKVACGSEHVVALVSAGE-TYKGEDL-VCYSWG----ANNNGQLGLGDRESRLR 177
G + GS + + + G+ ++ +DL + WG + ++GL S
Sbjct: 130 ESGSK----SKGSLKICDIKAGGQISFAIDDLGALWMWGNCPKPSGENEVGL-SYVSSFT 184
Query: 178 PKIIETFNQDSPWAVYEVTCGSFH-TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
P + F+ + V +V CG+ H AL++ + N + +C+++G +GQLG G
Sbjct: 185 PSPVWEFHGHT---VVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDKD 241
Query: 237 SALVPEQVKEL----PQYVYLVSVDCGLFHTSVVSSAGD--------VWSWGMEKGLGLC 284
S P+ ++ P VY V+ CG FHT+++S + W++G+ +
Sbjct: 242 SRACPQIIETFNEASPWAVYEVA--CGAFHTALLSHSKRPCDTLESVCWTFGLGE----- 294
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
N L + P + P+ + VACG HT +V+ G LWSWG R
Sbjct: 295 -NGQLGHGTTQNEFLPQPVK----ELPQSVSLISVACGLFHTSVVSSGG-DLWSWGMER 347
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 90/261 (34%), Gaps = 56/261 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV ++ G H + L G Y SWG G+LG G L P ++ + +
Sbjct: 17 VVAISAGEAHTLVLTGDGRVY--------SWGRGMFGRLGTGAESDELFPVRVKLGSGEE 68
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA---------- 238
V + GS+H+ LT + W +G GQLG SA
Sbjct: 69 NLKVVAIAAGSYHSLALTD--------DGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLE 120
Query: 239 ------LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
L E + + + + G + + G +W WG CP S N
Sbjct: 121 LEPPESLTEESGSKSKGSLKICDIKAGGQISFAIDDLGALWMWGN------CPKPS-GEN 173
Query: 293 EAGDAISPILISGNGP----HGPKFQDPVQVACGAAHTVLVTDDGYKL--------WSWG 340
E G +S + P HG V+VACG H V + G +SWG
Sbjct: 174 EVG--LSYVSSFTPSPVWEFHG---HTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWG 228
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
G LG G P I+
Sbjct: 229 DNSHGQLGLGDKDSRACPQII 249
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 304 SGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
SG P K V ++ G AHT+++T DG +++SWGRG G LGTG D P V
Sbjct: 4 SGTRPSSGKLSGKVVAISAGEAHTLVLTGDG-RVYSWGRGMFGRLGTGAESDELFPVRV 61
>gi|449507254|ref|XP_004162977.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cucumis sativus]
Length = 581
Score = 656 bits (1693), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 317/480 (66%), Positives = 379/480 (78%), Gaps = 12/480 (2%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF G NS PC+++QFL + P+SL ++S + K +KIC +KAGG +S AID+ GA
Sbjct: 100 GQLGFDGGNSATPCLLKQFLELEPPESLTEESGSKSKGSLKICDIKAGGQISFAIDDLGA 159
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY-KG 151
LWMWGNCP P E G S VSSFTPSPVW+FHGHTVVKVACG+EH+VALVS GETY K
Sbjct: 160 LWMWGNCPKPSGENEVGLSYVSSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKA 219
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
EDLVCYSWG N++GQLGLGD++SR P+IIETFN+ SPWAVYEV CG+FHTALL+H KRP
Sbjct: 220 EDLVCYSWGDNSHGQLGLGDKDSRACPQIIETFNEASPWAVYEVACGAFHTALLSHSKRP 279
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
D LES+CWTFGLGENGQLGHGTTQ+ +P+ VKELPQ V L+SV CGLFHTSVVSS GD
Sbjct: 280 CDTLESVCWTFGLGENGQLGHGTTQNEFLPQPVKELPQSVSLISVACGLFHTSVVSSGGD 339
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WSWGME+GLGLCP+AS T GDAISP+ I +G PKF DPVQVACGAAHTV+V
Sbjct: 340 LWSWGMERGLGLCPDASFTGTNTGDAISPLSIFCSGTESPKFLDPVQVACGAAHTVIVAH 399
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEI---KTKD 388
DGYKLWSWGRGRSGVLG GK +D F P +VLWPPL E+F Q+E T +D++ KT++
Sbjct: 400 DGYKLWSWGRGRSGVLGNGKAVDCFTPTVVLWPPLNEDFDQEETETKCEEDKVEENKTEE 459
Query: 389 -------LEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPIS 441
+E E ++KL AMEE+KLL KLS+MERYAS LHGSIFGKPF E DIP+S
Sbjct: 460 DKVEENKIEEVTEENKKLLMAMEEIKLLLDKLSIMERYASFLHGSIFGKPF-QEGDIPLS 518
Query: 442 LKDMGFFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSST 501
L++ G FDI KEWE+MLES+DRS L+RLE Y+NMLA +KDK++K+R+QE+V E L S+T
Sbjct: 519 LRNSGSFDIAKEWESMLESSDRSNLLRLETVYQNMLASIKDKILKKRVQELVKEFLQSAT 578
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 128/300 (42%), Gaps = 50/300 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS----LVSSF----TPSPVWD 123
+K+ ++ AG SLA+ + G++W WG +GG S L+ F P + +
Sbjct: 70 LKVVAIAAGSYHSLALTDDGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLELEPPESLTE 129
Query: 124 FHGHTVVKVACGSEHVVALVSAGE-TYKGEDL-VCYSWGANNNGQLGLGDRESRLRPKII 181
G + GS + + + G+ ++ +DL + WG N G+ E L +
Sbjct: 130 ESGSK----SKGSLKICDIKAGGQISFAIDDLGALWMWG---NCPKPSGENEVGL--SYV 180
Query: 182 ETFNQDSPW-----AVYEVTCGSFH-TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+F W V +V CG+ H AL++ + N + +C+++G +GQLG G
Sbjct: 181 SSFTPSPVWEFHGHTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWGDNSHGQLGLGDK 240
Query: 236 QSALVPEQVKEL----PQYVYLVSVDCGLFHTSVVSSAGD--------VWSWGMEKGLGL 283
S P+ ++ P VY V+ CG FHT+++S + W+ GL
Sbjct: 241 DSRACPQIIETFNEASPWAVYEVA--CGAFHTALLSHSKRPCDTLESVCWT------FGL 292
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
N L + P + P+ + VACG HT +V+ G LWSWG R
Sbjct: 293 GENGQLGHGTTQNEFLPQPVK----ELPQSVSLISVACGLFHTSVVSSGG-DLWSWGMER 347
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 90/261 (34%), Gaps = 56/261 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV ++ G H + L G Y SWG G+LG G L P ++ + +
Sbjct: 17 VVAISAGEAHTLVLTGDGRVY--------SWGRGMFGRLGTGAESDELFPVRVKLGSGEE 68
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA---------- 238
V + GS+H+ LT + W +G GQLG SA
Sbjct: 69 NLKVVAIAAGSYHSLALTD--------DGSVWCWGYNIYGQLGFDGGNSATPCLLKQFLE 120
Query: 239 ------LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
L E + + + + G + + G +W WG CP S N
Sbjct: 121 LEPPESLTEESGSKSKGSLKICDIKAGGQISFAIDDLGALWMWGN------CPKPS-GEN 173
Query: 293 EAGDAISPILISGNGP----HGPKFQDPVQVACGAAHTVLVTDDGYKL--------WSWG 340
E G +S + P HG V+VACG H V + G +SWG
Sbjct: 174 EVG--LSYVSSFTPSPVWEFHG---HTVVKVACGNEHIVALVSVGETYNKAEDLVCYSWG 228
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
G LG G P I+
Sbjct: 229 DNSHGQLGLGDKDSRACPQII 249
Score = 42.4 bits (98), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 304 SGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
SG P K V ++ G AHT+++T DG +++SWGRG G LGTG D P V
Sbjct: 4 SGTRPSSGKLSGKVVAISAGEAHTLVLTGDG-RVYSWGRGMFGRLGTGAESDELFPVRV 61
>gi|224141731|ref|XP_002324218.1| predicted protein [Populus trichocarpa]
gi|222865652|gb|EEF02783.1| predicted protein [Populus trichocarpa]
Length = 561
Score = 649 bits (1674), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 323/472 (68%), Positives = 378/472 (80%), Gaps = 5/472 (1%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG SG N +P +++QFL +G+ SL D S+T + P+KICS+KAGGMMSLAID+ GA
Sbjct: 95 GQLGVSGENYSMPHLMDQFLELGSLGSLIDHSETKSEGPLKICSIKAGGMMSLAIDDHGA 154
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
LWMWGNCP + T S SSF P PV DFHGH+VVKVACGSEHVVALVSAGETYK E
Sbjct: 155 LWMWGNCPQQRNKTGSSISFESSFIPIPVRDFHGHSVVKVACGSEHVVALVSAGETYKVE 214
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
DLVCYSWG NN+GQLGLGDRESR+ P+I+E FN+DS W VYEV CG++HTALLT ++R
Sbjct: 215 DLVCYSWGNNNHGQLGLGDRESRVHPEIVEMFNKDSSWDVYEVACGAYHTALLTRKRRTV 274
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
D LES+CWTFGLG+NGQLGHGTTQS L PE VKELP +L+SVDCGLFHTSVVSS GDV
Sbjct: 275 DPLESVCWTFGLGDNGQLGHGTTQSVLKPEPVKELPGQAHLISVDCGLFHTSVVSSVGDV 334
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WSWGMEKGLGLCP+AS T +AGDA SP+L+SG G GP F +P+QVACGAAHTVLV +D
Sbjct: 335 WSWGMEKGLGLCPDASFTGTDAGDAASPLLMSGYGVDGPIFHNPIQVACGAAHTVLVAND 394
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGA 392
GYKLWSWGRG SGVLG GKTI+ FAP+ VLWPPLTE+FKQ E T G + + +
Sbjct: 395 GYKLWSWGRGTSGVLGNGKTINCFAPSFVLWPPLTEDFKQPEPKTVGEE----SNGSKAV 450
Query: 393 EERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITK 452
E D++LS AMEE++LLQSKLS+ME+Y +LHG +FG+PF QDIPISL++ G FDI K
Sbjct: 451 AETDKRLSLAMEEIELLQSKLSIMEQYGGMLHGLVFGRPFTY-QDIPISLQNSGNFDIAK 509
Query: 453 EWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
EWE+MLESAD SKL RLE FYR+M A +KDK+MKRRIQEI+ ECL SST K
Sbjct: 510 EWESMLESADHSKLRRLELFYRDMRATIKDKIMKRRIQEIIKECLPSSTTAK 561
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 67/259 (25%), Positives = 94/259 (36%), Gaps = 52/259 (20%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QD 187
VV VA G H + L G Y SWG G+LG G L P ++ +
Sbjct: 11 VVSVATGEAHSLILTGDGRVY--------SWGKGMFGRLGTGSEVDELFPVQVKFETCVE 62
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL-------GENGQLGHGTTQ---- 236
V G++H+ L D CW + + GEN + H Q
Sbjct: 63 KRLNFVGVAAGAYHSLALA------DDGSVWCWGYNIYGQLGVSGENYSMPHLMDQFLEL 116
Query: 237 ---SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+L+ + + + S+ G + + G +W WG CP RN+
Sbjct: 117 GSLGSLIDHSETKSEGPLKICSIKAGGMMSLAIDDHGALWMWGN------CPQ---QRNK 167
Query: 294 AGDAISPILISGNGP----HGPKFQDPVQVACGAAHTVLVTDDG--YKL-----WSWGRG 342
G +IS P HG V+VACG+ H V + G YK+ +SWG
Sbjct: 168 TGSSISFESSFIPIPVRDFHG---HSVVKVACGSEHVVALVSAGETYKVEDLVCYSWGNN 224
Query: 343 RSGVLGTGKTIDFFAPAIV 361
G LG G P IV
Sbjct: 225 NHGQLGLGDRESRVHPEIV 243
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 369
V VA G AH++++T DG +++SWG+G G LGTG +D P V + E+
Sbjct: 12 VSVATGEAHSLILTGDG-RVYSWGKGMFGRLGTGSEVDELFPVQVKFETCVEK 63
>gi|357466661|ref|XP_003603615.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355492663|gb|AES73866.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 563
Score = 630 bits (1625), Expect = e-178, Method: Compositional matrix adjust.
Identities = 302/465 (64%), Positives = 372/465 (80%), Gaps = 5/465 (1%)
Query: 41 NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCP 100
+SLVPC++ +FL + +S D S+ KA +++C+VKAGGMMSLAIDN G LWMWGN
Sbjct: 103 DSLVPCLLSRFLELQPHNSSTDPSEAEDKASLEMCTVKAGGMMSLAIDNRGTLWMWGN-- 160
Query: 101 LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG 160
+P S E G SLVSSFTP+PVWDFHG TVVKVACG+EHVVALV+A ++++ EDL+CYSWG
Sbjct: 161 IPQESKESGISLVSSFTPTPVWDFHGRTVVKVACGNEHVVALVNAIDSHEDEDLLCYSWG 220
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N++GQLGLGDR+SRL P++++ +++SPW +YEV CG+FHTALL H+K+P+ LESMCW
Sbjct: 221 YNSHGQLGLGDRQSRLHPEVVKILDEESPWTIYEVACGAFHTALLAHKKKPDATLESMCW 280
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
TFGLGENGQLGHGTTQS L P VKELPQ ++L+SVDCGLFHTSVVSS GDVWSWGMEKG
Sbjct: 281 TFGLGENGQLGHGTTQSTLFPTPVKELPQSIHLISVDCGLFHTSVVSSTGDVWSWGMEKG 340
Query: 281 LGLCPNASLTR-NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
LGLCP+A+ N GDA+SP+LIS N H P F PV+VACGAAHTV+V +G+K+WSW
Sbjct: 341 LGLCPDANRAETNSGGDALSPLLISCN-LHQPIFPGPVKVACGAAHTVVVAQEGHKVWSW 399
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
GRGRSGVLG GK +D + P IV WPP E +++ELN+ D++ K E E DEKL
Sbjct: 400 GRGRSGVLGNGKEMDSYTPTIVPWPPTIEGLEEEELNSSDGQDKVAEKKPEIIAETDEKL 459
Query: 400 SSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLE 459
S+A+ E+KLLQ+KLS+ME+YASILHGSIFGKPF EQDIP+SL + G DI KEWENMLE
Sbjct: 460 STALNELKLLQTKLSIMEKYASILHGSIFGKPF-NEQDIPVSLGNSGSMDIAKEWENMLE 518
Query: 460 SADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
+AD KLV +E FYR+ML GVKDKLMKR+I+EI+ ECL SS + K
Sbjct: 519 AADDRKLVTMEMFYRDMLTGVKDKLMKRKIKEIIKECLESSEVIK 563
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 133/336 (39%), Gaps = 55/336 (16%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
S+ C G G G+ S + + L G P+ +D +KI + AG +L
Sbjct: 35 SVYCWGRGMFGRLGNGSQKDELFPKKLNFGNPNGTQDS--------VKIVGIAAGSYHTL 86
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----------TPSPVWDFHGHTVVKVACG 135
A+ G++W W DS L+S F PS D + V G
Sbjct: 87 ALAEDGSVWCWEE----DSHDSLVPCLLSRFLELQPHNSSTDPSEAEDKASLEMCTVKAG 142
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW----- 190
+A+ + G + W G + +ES + ++ +F W
Sbjct: 143 GMMSLAIDNRG--------TLWMW-----GNIPQESKESGI--SLVSSFTPTPVWDFHGR 187
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK----E 246
V +V CG+ H L + ++ + +C+++G +GQLG G QS L PE VK E
Sbjct: 188 TVVKVACGNEHVVALVNAIDSHEDEDLLCYSWGYNSHGQLGLGDRQSRLHPEVVKILDEE 247
Query: 247 LPQYVYLVSVDCGLFHTSVVS--SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
P +Y V+ CG FHT++++ D M GL N L + P +
Sbjct: 248 SPWTIYEVA--CGAFHTALLAHKKKPDATLESMCWTFGLGENGQLGHGTTQSTLFPTPVK 305
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
P+ + V CG HT +V+ G +WSWG
Sbjct: 306 ----ELPQSIHLISVDCGLFHTSVVSSTG-DVWSWG 336
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 98/274 (35%), Gaps = 70/274 (25%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+P D H +V VA G H + L ED Y WG G+LG G ++ L
Sbjct: 8 PNP--DNPSHKIVDVAAGESHTLLLT--------EDGSVYCWGRGMFGRLGNGSQKDELF 57
Query: 178 PKIIETFN----QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
PK + N QDS + + GS+HT L CW + H
Sbjct: 58 PKKLNFGNPNGTQDSV-KIVGIAAGSYHTLALAEDGS------VWCWE-------EDSHD 103
Query: 234 TTQSALVPEQVKELPQ-------------YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
+ L+ ++ P + + +V G + + + G +W WG
Sbjct: 104 SLVPCLLSRFLELQPHNSSTDPSEAEDKASLEMCTVKAGGMMSLAIDNRGTLWMWG---- 159
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGP------HGPKFQDPVQVACGAAHTVLVT---- 330
N E+G + L+S P HG + V+VACG H V +
Sbjct: 160 -----NIPQESKESGIS----LVSSFTPTPVWDFHG---RTVVKVACGNEHVVALVNAID 207
Query: 331 ---DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D+ +SWG G LG G P +V
Sbjct: 208 SHEDEDLLCYSWGYNSHGQLGLGDRQSRLHPEVV 241
>gi|356554552|ref|XP_003545609.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 576
Score = 625 bits (1613), Expect = e-176, Method: Compositional matrix adjust.
Identities = 307/466 (65%), Positives = 376/466 (80%), Gaps = 10/466 (2%)
Query: 39 GSNSLVPCVIEQFLTIGAPDS--LEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW 96
G S+VPC++ +FL + PDS + +T +A +KI VKAGGMMSL IDN GALW+W
Sbjct: 114 GDYSIVPCLLNKFLDLHPPDSSSISIVPETEGQASLKIIDVKAGGMMSLCIDNLGALWLW 173
Query: 97 GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG-EDLV 155
GNCP S EG FSL+S+FTP+PVWDFHGHTVVKVACG+EHVVALV+AGE+YKG +DLV
Sbjct: 174 GNCP--QQSKEGDFSLISNFTPTPVWDFHGHTVVKVACGNEHVVALVTAGESYKGVDDLV 231
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
CY+WG N++GQLGLGD ++R RP++++TF+ +SPWA+YEV CG+FHTALLTH+KR +D L
Sbjct: 232 CYTWGNNSHGQLGLGDTKNRPRPQVVKTFDLESPWAIYEVACGAFHTALLTHKKRHSDTL 291
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
ES CWTFGLG+NGQLG GTTQS +PE VKELPQ V+LVSVDCGLFHT VVSS GDVWSW
Sbjct: 292 ESTCWTFGLGDNGQLGRGTTQSTSLPEPVKELPQNVHLVSVDCGLFHTCVVSSDGDVWSW 351
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
GMEKGLGLC + S +GDA+SP LIS N PH PKF PVQVACGAAHTV++ +G K
Sbjct: 352 GMEKGLGLCSDDSNGGTHSGDALSPFLISCN-PHQPKFSQPVQVACGAAHTVIIAHEGCK 410
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEER 395
LWSWGRGRSGVLG GKT+D + P IVLWPPL E+FKQ+EL + D+ +TK++ E
Sbjct: 411 LWSWGRGRSGVLGNGKTMDSYTPTIVLWPPLMEDFKQEELYSSCEHDKNETKEV---TEI 467
Query: 396 DEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWE 455
DE+LSSA+ ++KLLQ+KLS++ERYASILH S+FG+PF EQD+P SLK+ G FDI KEWE
Sbjct: 468 DERLSSALNQLKLLQTKLSIIERYASILHSSLFGEPF-DEQDVPASLKNSGAFDIAKEWE 526
Query: 456 NMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSST 501
NMLE+AD +KL+ LE YRNM A VK+KLMKRRI+ I++ECL S+
Sbjct: 527 NMLEAADGTKLINLEMLYRNMHASVKEKLMKRRIKAIIDECLLQSS 572
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 67/278 (24%), Positives = 101/278 (36%), Gaps = 79/278 (28%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +A G H + L G Y SWG G+LG G + P ++ +++
Sbjct: 14 VVAIAAGEAHTLLLTGDGRVY--------SWGRGILGRLGQGSEHDKHFPVEVKFGSEED 65
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HG-------------- 233
+ + G++H+ L + W +G GQLG HG
Sbjct: 66 SVRIVGIAAGAYHSLALAD--------DGYVWCWGYNIYGQLGIHGEEFHGRKYTDGDYS 117
Query: 234 ----------------TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++ ++VPE E + ++ V G + + + G +W WG
Sbjct: 118 IVPCLLNKFLDLHPPDSSSISIVPE--TEGQASLKIIDVKAGGMMSLCIDNLGALWLWGN 175
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISGNGP------HGPKFQDPVQVACGAAHTVLVTD 331
CP S + GD LIS P HG V+VACG H V +
Sbjct: 176 ------CPQQS----KEGDF---SLISNFTPTPVWDFHG---HTVVKVACGNEHVVALVT 219
Query: 332 DG--YK------LWSWGRGRSGVLGTGKTIDFFAPAIV 361
G YK ++WG G LG G T + P +V
Sbjct: 220 AGESYKGVDDLVCYTWGNNSHGQLGLGDTKNRPRPQVV 257
>gi|356507929|ref|XP_003522715.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 559
Score = 618 bits (1593), Expect = e-174, Method: Compositional matrix adjust.
Identities = 306/467 (65%), Positives = 361/467 (77%), Gaps = 31/467 (6%)
Query: 39 GSNSLVPCVIEQFLTIGAPDSLEDD-SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 97
G NSLVP ++ +FL + PDS S+ K P+KIC+VKAGGMMSLAIDN G LWMWG
Sbjct: 123 GDNSLVPRILNKFLELHPPDSSSSGVSEAESKTPLKICAVKAGGMMSLAIDNHGTLWMWG 182
Query: 98 NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCY 157
NCP S EGG +LVSSFTP+PVWDF GHTVVKVACG+EHVVALVSAGETY GEDLVCY
Sbjct: 183 NCP--RQSKEGGLALVSSFTPTPVWDFQGHTVVKVACGNEHVVALVSAGETYNGEDLVCY 240
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
SWG N+ GQLGLGDRESRL P+++ TF+++SP YEV CG+FHTALLT +K+P+D +ES
Sbjct: 241 SWGYNSRGQLGLGDRESRLHPEVVRTFDEESP---YEVACGAFHTALLTRKKKPSDTVES 297
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
CWTFGLG+NGQLGHGTTQS L P VKELPQ V L+ VDCGLFHTSVVSS GDVWSWGM
Sbjct: 298 TCWTFGLGDNGQLGHGTTQSTLFPTPVKELPQNVSLICVDCGLFHTSVVSSDGDVWSWGM 357
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
EKGLGLCP+AS ++GDA+SP L+S PH KF DPV+VACGAAHTV+V GY++W
Sbjct: 358 EKGLGLCPDASRAGTDSGDALSPRLMSCQ-PHQLKFPDPVKVACGAAHTVIVARKGYRMW 416
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDE 397
SWGRGRSGVLG GK D + P VLWP E+ +++E+
Sbjct: 417 SWGRGRSGVLGDGKGFDCYTPTAVLWPSTMEDSEEEEVK--------------------- 455
Query: 398 KLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENM 457
SSA+ E+KLLQ+KLS+ME+YASILHGSIFGKPF EQDIP+SL++ G FDI KEWE+M
Sbjct: 456 --SSALNELKLLQTKLSIMEKYASILHGSIFGKPF-DEQDIPVSLRNSGSFDIAKEWESM 512
Query: 458 LESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
LE+AD+ KL+RLE FYR+ML GVKD+LMKRRI+EIV ECL SS + K
Sbjct: 513 LEAADQRKLIRLEMFYRDMLTGVKDELMKRRIKEIVQECLQSSEVKK 559
Score = 43.9 bits (102), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 65/277 (23%), Positives = 96/277 (34%), Gaps = 74/277 (26%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VA G H + L G Y WG G+LG G + L P + F +
Sbjct: 18 VVDVAAGEAHTLLLTGDGSVY--------CWGKGMFGRLGTGAEKDELLP-VQLNFGYPN 68
Query: 189 P------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG----------H 232
P + + + G++H+ L + W +G GQLG +
Sbjct: 69 PNGTEGTFKIVGIAAGAYHSLALAE--------DGAVWCWGYNFYGQLGINGEESHDNEY 120
Query: 233 GTTQSALVPEQVKELPQY------------------VYLVSVDCGLFHTSVVSSAGDVWS 274
++LVP + + + + + +V G + + + G +W
Sbjct: 121 AVGDNSLVPRILNKFLELHPPDSSSSGVSEAESKTPLKICAVKAGGMMSLAIDNHGTLWM 180
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP-KFQ--DPVQVACGAAHTVLVTD 331
WG CP S E G A L+S P FQ V+VACG H V +
Sbjct: 181 WGN------CPRQS---KEGGLA----LVSSFTPTPVWDFQGHTVVKVACGNEHVVALVS 227
Query: 332 DGYKL-------WSWGRGRSGVLGTGKTIDFFAPAIV 361
G +SWG G LG G P +V
Sbjct: 228 AGETYNGEDLVCYSWGYNSRGQLGLGDRESRLHPEVV 264
>gi|99646741|emb|CAK22423.1| regulator of chromosome condensation family protein [Beta vulgaris]
Length = 573
Score = 608 bits (1569), Expect = e-171, Method: Compositional matrix adjust.
Identities = 296/468 (63%), Positives = 363/468 (77%), Gaps = 3/468 (0%)
Query: 34 QLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGAL 93
QLGF G N VP +++ L + +P SL DDSK K P+K+C+++AGGMMS+AIDN GAL
Sbjct: 103 QLGFDGDNVSVPRQLDKLLQLDSPRSLGDDSKGKSKHPLKVCAIEAGGMMSVAIDNLGAL 162
Query: 94 WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGED 153
WMWGN P S + FSL S TP P++DF+GHTVVKVACG+EH+VALVSAGE + G+D
Sbjct: 163 WMWGNIPQQSSPEDDAFSLGSVPTPVPMFDFYGHTVVKVACGNEHIVALVSAGEKHVGDD 222
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
LVCY+WG N +GQLGLGD ESRL P+ + F++ S W YEV CG+FHT +L+ +KRP+D
Sbjct: 223 LVCYTWGNNMHGQLGLGDTESRLHPQAVAQFSEGSAWRAYEVACGAFHTVVLSLKKRPSD 282
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
LES+CWTFGLGENGQLGHGTTQS +PE +ELP+ Y VSVDCGLFHTSVVSSAG+VW
Sbjct: 283 TLESVCWTFGLGENGQLGHGTTQSVSLPEPARELPENAYFVSVDCGLFHTSVVSSAGEVW 342
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWGMEKGLGLCP+ S + + GDAI P+ I N P GPKF +PV +ACGAAHTVLV DDG
Sbjct: 343 SWGMEKGLGLCPDVSFSGIDHGDAILPLQILCNRPQGPKFPEPVGIACGAAHTVLVADDG 402
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAE 393
YKLWSWGRGRSGVLG GK D ++P++VLWPPL+E+FK D LN+ + + K E
Sbjct: 403 YKLWSWGRGRSGVLGDGKGSDSYSPSMVLWPPLSEDFK-DGLNSPDTESKKPEKKAE-VT 460
Query: 394 ERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKE 453
E DEK+S +EEMK LQSKLSVMERY +ILHGS+FG+PF E++IP SL + FD+++
Sbjct: 461 EVDEKVSPTLEEMKRLQSKLSVMERYVTILHGSLFGRPF-EEREIPASLLESDSFDVSEA 519
Query: 454 WENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSST 501
W+ MLE+ADR +L RLE FY NML GVKDK+MKR+IQEIV ECL SS+
Sbjct: 520 WKTMLEAADRKELRRLEMFYGNMLDGVKDKIMKRKIQEIVRECLQSSS 567
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 95/270 (35%), Gaps = 67/270 (24%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
H ++ V G H +AL G+ + SWG G+LG G P I+ N
Sbjct: 13 HKIIAVTAGEAHTLALSEVGKVF--------SWGRGTFGRLGNGSESDESFPVPIKLDND 64
Query: 187 DS----PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
S P + G++H+ L + W +G QLG + VP
Sbjct: 65 GSLNEKPLNFVGIAAGAYHSLALAD--------DGSVWCWGYNTYSQLGF-DGDNVSVPR 115
Query: 243 QVKELPQY-----------------VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
Q+ +L Q + + +++ G + + + G +W WG P
Sbjct: 116 QLDKLLQLDSPRSLGDDSKGKSKHPLKVCAIEAGGMMSVAIDNLGALWMWGN------IP 169
Query: 286 NASLTRNEA---GDAISPILISGNGPHGPKF----QDPVQVACGAAHTVLVTDDGYK--- 335
S ++A G +P+ P F V+VACG H V + G K
Sbjct: 170 QQSSPEDDAFSLGSVPTPV---------PMFDFYGHTVVKVACGNEHIVALVSAGEKHVG 220
Query: 336 ----LWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G LG G T P V
Sbjct: 221 DDLVCYTWGNNMHGQLGLGDTESRLHPQAV 250
>gi|326494692|dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 566
Score = 555 bits (1429), Expect = e-155, Method: Compositional matrix adjust.
Identities = 269/478 (56%), Positives = 356/478 (74%), Gaps = 16/478 (3%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG+ NSL PC+++ F +G+P++L+D+++ T + P+K+ SVKAGGMMS AID+ G
Sbjct: 93 GQLGYGEENSLSPCLVDGFQDLGSPETLQDEAQDTLARTPLKLSSVKAGGMMSFAIDSLG 152
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
ALWMWGNCP + +G F + ++ P PVWDFHGHTVVKVACG+EHVVA VSAGETY G
Sbjct: 153 ALWMWGNCP--QQTDDGEFYIAATSAPLPVWDFHGHTVVKVACGNEHVVAAVSAGETYTG 210
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
DLVCYSWG NN+GQLGLGD+ESR RP +I F + S W VYE+ CG++HTA+LT++K
Sbjct: 211 GDLVCYSWGNNNHGQLGLGDKESRSRPMLIPEFGEGSSWEVYEIACGAWHTAVLTNKKSF 270
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ LES CWTFG+G+NGQLGHGTT + P+ V LP +L+S+DCGLFHT+VVSS G+
Sbjct: 271 DQDLESRCWTFGIGDNGQLGHGTTATTCSPQPVDGLPTGSFLISLDCGLFHTAVVSSDGE 330
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW WGME+GLGLCP+AS + +AGDA+ PI + +G KF PVQVACGAAHTVLV
Sbjct: 331 VWCWGMERGLGLCPDASFSGMDAGDALHPIRVQSPETNGFKFLGPVQVACGAAHTVLVAG 390
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK-----QDELNTGGLDDEIKT 386
DGY++W+WGRGRSGVLG +T D + P +V+WPPL E F+ Q + +T +D T
Sbjct: 391 DGYRMWAWGRGRSGVLGRDQTTDSYTPCVVMWPPLDENFQEIHGDQAQASTSRANDRTNT 450
Query: 387 KDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMG 446
E + KLS+A EE++ L+SKL++MERYA+ILH SIF KP E+ +P SL++
Sbjct: 451 -------ELELKLSAASEELQFLRSKLTLMERYANILHISIFRKPM-DERTLPRSLQESA 502
Query: 447 FFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
FDI KE+EN+L+S+D +L RLE FYR+ML+GVKDKL+KR+++ +V EC+ S + G+
Sbjct: 503 VFDIRKEFENILDSSDTDELARLEMFYRSMLSGVKDKLLKRKVEVMVQECIVSLSAGR 560
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 132/338 (39%), Gaps = 83/338 (24%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-- 128
P K+ +V AG +LA+ G ++ WG G F + + + D H T
Sbjct: 2 PPKVSAVAAGEAHTLALTGDGEVYSWG---------RGTFGRLGTGREA---DVHVPTAV 49
Query: 129 ---------------VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
V VA G+ H +AL G +SWG N GQLG G+ E
Sbjct: 50 LPAVAAAAAGRPRPRFVAVAAGAYHSLALDDEGS--------LWSWGYNIYGQLGYGE-E 100
Query: 174 SRLRPKIIETFNQ-DSPWAVYEVTCGSF-HTALLTHRKRPNDMLESMCWTFGLGENGQL- 230
+ L P +++ F SP + + + T L + M+ +F + G L
Sbjct: 101 NSLSPCLVDGFQDLGSPETLQDEAQDTLARTPLKLSSVKAGGMM-----SFAIDSLGALW 155
Query: 231 --GHGTTQSA----LVPEQVKELPQYVY----LVSVDCGLFHTSVVSSAGDV-------- 272
G+ Q+ + LP + + +V V CG H SAG+
Sbjct: 156 MWGNCPQQTDDGEFYIAATSAPLPVWDFHGHTVVKVACGNEHVVAAVSAGETYTGGDLVC 215
Query: 273 WSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+SWG LGL S +R P+LI G G ++ ++ACGA HT ++T
Sbjct: 216 YSWGNNNHGQLGLGDKESRSR--------PMLIPEFG-EGSSWE-VYEIACGAWHTAVLT 265
Query: 331 -------DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + W++G G +G LG G T +P V
Sbjct: 266 NKKSFDQDLESRCWTFGIGDNGQLGHGTTATTCSPQPV 303
>gi|357136240|ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 564
Score = 552 bits (1422), Expect = e-154, Method: Compositional matrix adjust.
Identities = 272/478 (56%), Positives = 361/478 (75%), Gaps = 16/478 (3%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG+ NSL PC++E+F +G+P++L+ +++ T + P+K+ SVKAGGMMS AID+ G
Sbjct: 91 GQLGYGEENSLFPCLVERFQDLGSPETLQREAQETLAQTPLKLSSVKAGGMMSFAIDSLG 150
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
ALWMWGNCP + +G F + +S P PVWDFHGHTVVKVACG+EHVVA VSAGETY G
Sbjct: 151 ALWMWGNCP--QQTDDGEFCIAASSVPLPVWDFHGHTVVKVACGNEHVVAAVSAGETYAG 208
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
DLVCYSWG NN+GQLGLGD+ESR RP II F++ S W VYE+ CG++HTA+LT++K
Sbjct: 209 GDLVCYSWGNNNHGQLGLGDKESRSRPVIISEFSESSSWEVYEIACGAWHTAVLTNKKSF 268
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ LES CWTFG+G+NGQLGHGTT + + P+ V LP +L+S+DCGLFHT+VVSS G+
Sbjct: 269 DQDLESRCWTFGIGDNGQLGHGTTATIVSPQPVDGLPTGSFLISLDCGLFHTAVVSSDGE 328
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW WGME+GLGLCP+AS + +AGDA+ PI + +G KF PVQV CGAAHTVLV
Sbjct: 329 VWCWGMERGLGLCPDASFSGIDAGDALYPIRVQSPETNGFKFLGPVQVTCGAAHTVLVAG 388
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK-----QDELNTGGLDDEIKT 386
DGY++W+WGRGRSGVLG +T D + P +V+WPPL E F+ Q + +T G++D T
Sbjct: 389 DGYRMWAWGRGRSGVLGRDQTTDSYTPCVVMWPPLDENFQEIHENQGQASTSGVNDRSST 448
Query: 387 KDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMG 446
E ++KLS+A EE++ L+SKL++MERYA+ILH SIF KP E+ +P SL++
Sbjct: 449 -------ELEQKLSTASEELQFLRSKLTLMERYANILHISIFRKPM-DERTLPRSLQESA 500
Query: 447 FFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
FDI KE+EN+L+++D +L RLE FYR+ML+GVKDKL+KR++QE+V EC+ S + G+
Sbjct: 501 VFDIRKEFENILDASDTDELSRLEMFYRSMLSGVKDKLLKRKVQEMVQECIVSLSAGR 558
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 83/320 (25%), Positives = 128/320 (40%), Gaps = 49/320 (15%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPS-PVWDFHGH 127
P K+ +V AG +LA+ G ++ WG + +EG + ++ P+ V
Sbjct: 2 PPKVSAVAAGEAHTLALTCNGEVYSWGRGTFGRLGTGSEGDEHVPTAVAPAVAVGGRPRP 61
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ- 186
VA G+ H +AL G +SWG N GQLG G+ E+ L P ++E F
Sbjct: 62 KFAAVAAGAYHSLALDDEGS--------LWSWGYNIYGQLGYGE-ENSLFPCLVERFQDL 112
Query: 187 DSPWAVYEVTCGSF-HTALLTHRKRPNDMLE------SMCWTFG-LGENGQLGHGTTQSA 238
SP + + T L + M+ W +G + G ++
Sbjct: 113 GSPETLQREAQETLAQTPLKLSSVKAGGMMSFAIDSLGALWMWGNCPQQTDDGEFCIAAS 172
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--------WSWGMEK--GLGLCPNAS 288
VP V + + +V V CG H SAG+ +SWG LGL S
Sbjct: 173 SVPLPVWDFHGHT-VVKVACGNEHVVAAVSAGETYAGGDLVCYSWGNNNHGQLGLGDKES 231
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-------DDGYKLWSWGR 341
+R P++IS + ++ACGA HT ++T D + W++G
Sbjct: 232 RSR--------PVIISEF--SESSSWEVYEIACGAWHTAVLTNKKSFDQDLESRCWTFGI 281
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G +G LG G T +P V
Sbjct: 282 GDNGQLGHGTTATIVSPQPV 301
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 53/117 (45%), Gaps = 13/117 (11%)
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
+V G HT ++ G+V+SWG G S A++P + G P PKF
Sbjct: 7 AVAAGEAHTLALTCNGEVYSWG-RGTFGRLGTGSEGDEHVPTAVAPAVAVGGRPR-PKF- 63
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
VA GA H++ + D+G LWSWG G LG G+ F P L E F+
Sbjct: 64 --AAVAAGAYHSLALDDEG-SLWSWGYNIYGQLGYGEENSLF-------PCLVERFQ 110
>gi|212275634|ref|NP_001130888.1| uncharacterized protein LOC100191992 [Zea mays]
gi|194690372|gb|ACF79270.1| unknown [Zea mays]
gi|219884485|gb|ACL52617.1| unknown [Zea mays]
gi|219885259|gb|ACL53004.1| unknown [Zea mays]
gi|219885461|gb|ACL53105.1| unknown [Zea mays]
gi|238010394|gb|ACR36232.1| unknown [Zea mays]
gi|414880676|tpg|DAA57807.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 556
Score = 550 bits (1416), Expect = e-154, Method: Compositional matrix adjust.
Identities = 268/470 (57%), Positives = 350/470 (74%), Gaps = 14/470 (2%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLED-DSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG+ NSL PC +EQF +G+P++L D D T + +K+ SV AGGMMSLAID+ G
Sbjct: 91 GQLGYGDQNSLFPCFVEQFQDLGSPETLNDEDQNTRGRTCLKLSSVTAGGMMSLAIDSLG 150
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+LWMWG+CP + G F + SS P PVWDFHGHTVVKVACG+EHVVA VSAGETY G
Sbjct: 151 SLWMWGSCP--QQTDAGEFCISSSSIPLPVWDFHGHTVVKVACGNEHVVAAVSAGETYTG 208
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
DLVCY+WG NN+GQLGLGD+ESR RP +I F++ S W VYE+ CG+ HTA+L ++K
Sbjct: 209 GDLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACGASHTAVLANKKS- 267
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
D +ES CWTFGLG+ GQLGHGTT + P+ V LP +L+S+DCGLFHT+VVSS G+
Sbjct: 268 TDQIESRCWTFGLGDKGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLFHTTVVSSDGE 327
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW WGME+GLGLCP+AS + + GDA+ PI + +G KF PVQ+ACGAAHTVLV
Sbjct: 328 VWCWGMERGLGLCPDASFSGVDEGDALYPIRVQSPETNGFKFLGPVQIACGAAHTVLVAG 387
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDEL--NTGGLDDEIKTKDL 389
DGY++W+WGRGRSGVLG G+T D + P +V+WPPL E F +D++ +T ++D T
Sbjct: 388 DGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFHEDQMGGSTSRVNDHTST--- 444
Query: 390 EGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFD 449
E ++KLS+A EE++ L+SKL++MERYA+ILH SIF KP E+ +P SL++ FD
Sbjct: 445 ----ELEQKLSAASEELQFLRSKLTLMERYANILHISIFRKPL-DERALPRSLQESSVFD 499
Query: 450 ITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHS 499
I KE+EN+L++AD +L RLE FYR+ML+GVKDKL+KRR++E+V +C+ S
Sbjct: 500 IRKEFENILDAADTDELNRLEIFYRSMLSGVKDKLLKRRVREMVQQCIIS 549
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/334 (26%), Positives = 132/334 (39%), Gaps = 78/334 (23%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPD----------SSTEGGFSLVSSFTPSP 120
P K+ +V AG +LA+ G ++ WG P T ++ +S TP P
Sbjct: 2 PPKVVAVAAGEAHTLALTGDGQVYSWGRGPFGRLGNGREDDKLVPTAVAPAVSASGTPRP 61
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V VA G+ H +AL G +SWG N GQLG GD+ S L P
Sbjct: 62 -------RFVAVAAGAYHSLALDDEGS--------LWSWGYNLYGQLGYGDQNS-LFPCF 105
Query: 181 IETFNQ-DSPWAVYE---------------VTCGSFHTALLTHRKRPNDMLESMCWTFG- 223
+E F SP + + VT G + + D L S+ W +G
Sbjct: 106 VEQFQDLGSPETLNDEDQNTRGRTCLKLSSVTAGGMMSLAI-------DSLGSL-WMWGS 157
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS--------W 275
+ G S+ +P V + + +V V CG H SAG+ ++ W
Sbjct: 158 CPQQTDAGEFCISSSSIPLPVWDFHGHT-VVKVACGNEHVVAAVSAGETYTGGDLVCYAW 216
Query: 276 GMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G LGL S +R P+LIS G ++ ++ACGA+HT ++ +
Sbjct: 217 GNNNHGQLGLGDKESRSR--------PVLISAFS-EGSSWE-VYEIACGASHTAVLANKK 266
Query: 334 ------YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ W++G G G LG G T +P V
Sbjct: 267 STDQIESRCWTFGLGDKGQLGHGTTATICSPQPV 300
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V+V G HT ++ G V+SWG G N A++P +S +G P+
Sbjct: 5 VVAVAAGEAHTLALTGDGQVYSWG-RGPFGRLGNGREDDKLVPTAVAPA-VSASGTPRPR 62
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 372
F V VA GA H++ + D+G LWSWG G LG G F P E+F Q
Sbjct: 63 F---VAVAAGAYHSLALDDEG-SLWSWGYNLYGQLGYGDQNSLF-------PCFVEQF-Q 110
Query: 373 DELNTGGLDDE 383
D + L+DE
Sbjct: 111 DLGSPETLNDE 121
>gi|115439669|ref|NP_001044114.1| Os01g0725600 [Oryza sativa Japonica Group]
gi|20161135|dbj|BAB90063.1| BNR repeat domain protein-like [Oryza sativa Japonica Group]
gi|113533645|dbj|BAF06028.1| Os01g0725600 [Oryza sativa Japonica Group]
gi|215715258|dbj|BAG95009.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 557
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/478 (55%), Positives = 356/478 (74%), Gaps = 16/478 (3%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG+ NSL PC++E+F +G+P++L+ +++ ++ ++ +K+ SVKAGGMMS AID G
Sbjct: 87 GQLGYGEENSLFPCLVERFQDLGSPETLQSEAQNSSTQSSLKLSSVKAGGMMSFAIDTLG 146
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
A+WMWGNCP + G F + S P PVWDFHGHTVVKVACG+EHVVA VSAGETY G
Sbjct: 147 AMWMWGNCP--QQTDAGEFCIAPSCVPLPVWDFHGHTVVKVACGNEHVVAAVSAGETYTG 204
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
DLVCY+WG NN+GQLGLGD+ESR RP +I F++ S W VYE+ CG++HTA+LT++K
Sbjct: 205 GDLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACGTWHTAVLTNKKSF 264
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ LES CWTFGLG+NGQLGHGTT + P+ V LP +L+S+DCGLFHT+VVSS G+
Sbjct: 265 DVDLESRCWTFGLGDNGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLFHTTVVSSDGE 324
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW WGME+GLGLCP+AS + ++GDA+ PI + +G KF VQV CGAAHTVLV
Sbjct: 325 VWCWGMERGLGLCPDASFSGVDSGDALRPIRVQSPETNGFKFLGAVQVTCGAAHTVLVAG 384
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ-----DELNTGGLDDEIKT 386
DGY++W+WGRGRSGVLG +T D + P +V+WPPL E F++ + +T G++D
Sbjct: 385 DGYRMWAWGRGRSGVLGRNQTADSYIPCVVMWPPLDENFQEIHEDRAQASTSGVND---- 440
Query: 387 KDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMG 446
+ E ++KLS+A EE++ L+SKL++MERYA+ILH SIF KP E+ +P SL++
Sbjct: 441 ---RNSAELEQKLSAASEELEFLRSKLTLMERYANILHISIFRKPL-DERTLPRSLQESP 496
Query: 447 FFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
FDI KE+EN+L++A +L RLE FYR+ML+GVKDKL+KRR+QE+V EC+ S + G+
Sbjct: 497 VFDIRKEFENILDTAGTDELNRLEIFYRSMLSGVKDKLLKRRVQEMVQECIVSLSSGR 554
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/328 (26%), Positives = 129/328 (39%), Gaps = 69/328 (21%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ +V AG +LA+ G ++ WG G F + + + D H TVV
Sbjct: 2 PPKVVAVAAGEAHTLALTGDGEVYSWG---------RGMFGRLGTGREA---DEHVPTVV 49
Query: 131 K-----------VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
VA G+ H +AL G +SWG N GQLG G+ E+ L P
Sbjct: 50 AAGGRPRPRFVAVASGAYHSLALDDEGS--------LWSWGYNIYGQLGYGE-ENSLFPC 100
Query: 180 IIETFNQ-DSPWAVY-EVTCGSFHTALLTHRKRPNDMLESMCWTFGL-------GENGQL 230
++E F SP + E S ++L + M+ T G +
Sbjct: 101 LVERFQDLGSPETLQSEAQNSSTQSSLKLSSVKAGGMMSFAIDTLGAMWMWGNCPQQTDA 160
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS--------WGMEK--G 280
G + VP V + + +V V CG H SAG+ ++ WG
Sbjct: 161 GEFCIAPSCVPLPVWDFHGHT-VVKVACGNEHVVAAVSAGETYTGGDLVCYAWGNNNHGQ 219
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-------DDG 333
LGL S +R P+LIS G ++ ++ACG HT ++T D
Sbjct: 220 LGLGDKESRSR--------PVLISAFS-EGSSWE-VYEIACGTWHTAVLTNKKSFDVDLE 269
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ W++G G +G LG G T +P V
Sbjct: 270 SRCWTFGLGDNGQLGHGTTATICSPQPV 297
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 21/121 (17%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V+V G HT ++ G+V+SWG M LG T EA + + ++ +G P
Sbjct: 5 VVAVAAGEAHTLALTGDGEVYSWGRGMFGRLG-------TGREADEHVPTVVAAGGRPR- 56
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
P+F V VA GA H++ + D+G LWSWG G LG G+ F P L E F
Sbjct: 57 PRF---VAVASGAYHSLALDDEG-SLWSWGYNIYGQLGYGEENSLF-------PCLVERF 105
Query: 371 K 371
+
Sbjct: 106 Q 106
>gi|218188983|gb|EEC71410.1| hypothetical protein OsI_03583 [Oryza sativa Indica Group]
Length = 557
Score = 545 bits (1404), Expect = e-152, Method: Compositional matrix adjust.
Identities = 265/478 (55%), Positives = 356/478 (74%), Gaps = 16/478 (3%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG+ NSL PC++E+F +G+P++L+ +++ ++ ++ +K+ SVKAGGMMS AID G
Sbjct: 87 GQLGYGEENSLFPCLVERFQDLGSPETLQSEAQNSSTQSSLKLSSVKAGGMMSFAIDTLG 146
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
A+WMWGNCP + G F + S P PVWDFHGHTVVKVACG+EHVVA VSAGETY G
Sbjct: 147 AMWMWGNCP--QQTDAGEFCIAPSCVPLPVWDFHGHTVVKVACGNEHVVAAVSAGETYTG 204
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
DLVCY+WG NN+GQLGLGD+ESR RP +I F++ S W VYE+ CG++HTA+LT++K
Sbjct: 205 GDLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACGAWHTAVLTNKKSF 264
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ LES CWTFGLG+NGQLGHGTT + P+ V LP +L+S+DCGLFHT+VVSS G+
Sbjct: 265 DVDLESRCWTFGLGDNGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLFHTTVVSSDGE 324
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW WGME+GLGLCP+AS + ++GDA+ PI + +G KF VQV CGAAHTVLV
Sbjct: 325 VWCWGMERGLGLCPDASFSGVDSGDALRPIRVQSPETNGFKFLGAVQVTCGAAHTVLVAG 384
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ-----DELNTGGLDDEIKT 386
DGY++W+WGRGRSGVLG +T D + P +V+WPPL E F++ + +T G++D
Sbjct: 385 DGYRMWAWGRGRSGVLGRNQTADSYIPCVVMWPPLDENFQEIHEDRAQASTSGVND---- 440
Query: 387 KDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMG 446
+ E ++KLS+A EE++ L+SKL++MERYA+ILH SIF KP E+ +P SL++
Sbjct: 441 ---RNSAELEQKLSAASEELEFLRSKLTLMERYANILHISIFRKPL-DERTLPRSLQESP 496
Query: 447 FFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
FDI KE+EN+L++A +L RLE FYR+ML+GVKDKL+KRR+QE+V EC+ S + G+
Sbjct: 497 VFDIRKEFENILDTAGTDELNRLEIFYRSMLSGVKDKLLKRRVQEMVQECIVSLSSGR 554
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 88/328 (26%), Positives = 130/328 (39%), Gaps = 69/328 (21%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ +V AG +LA+ G ++ WG G F + + + D H TVV
Sbjct: 2 PPKVVAVAAGEAHTLALTGDGEVYSWG---------RGMFGRLGTGREA---DEHVPTVV 49
Query: 131 K-----------VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
VA G+ H +AL G +SWG N GQLG G+ E+ L P
Sbjct: 50 AAGGRPRPRFVAVASGAYHSLALDDEGS--------LWSWGYNIYGQLGYGE-ENSLFPC 100
Query: 180 IIETFNQ-DSPWAVY-EVTCGSFHTALLTHRKRPNDMLESMCWTFGL-------GENGQL 230
++E F SP + E S ++L + M+ T G +
Sbjct: 101 LVERFQDLGSPETLQSEAQNSSTQSSLKLSSVKAGGMMSFAIDTLGAMWMWGNCPQQTDA 160
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS--------WGMEK--G 280
G + VP V + + +V V CG H SAG+ ++ WG
Sbjct: 161 GEFCIAPSCVPLPVWDFHGHT-VVKVACGNEHVVAAVSAGETYTGGDLVCYAWGNNNHGQ 219
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-------DDG 333
LGL S +R P+LIS G ++ ++ACGA HT ++T D
Sbjct: 220 LGLGDKESRSR--------PVLISAFS-EGSSWE-VYEIACGAWHTAVLTNKKSFDVDLE 269
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ W++G G +G LG G T +P V
Sbjct: 270 SRCWTFGLGDNGQLGHGTTATICSPQPV 297
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 60/121 (49%), Gaps = 21/121 (17%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V+V G HT ++ G+V+SWG M LG T EA + + ++ +G P
Sbjct: 5 VVAVAAGEAHTLALTGDGEVYSWGRGMFGRLG-------TGREADEHVPTVVAAGGRPR- 56
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
P+F V VA GA H++ + D+G LWSWG G LG G+ F P L E F
Sbjct: 57 PRF---VAVASGAYHSLALDDEG-SLWSWGYNIYGQLGYGEENSLF-------PCLVERF 105
Query: 371 K 371
+
Sbjct: 106 Q 106
>gi|242054259|ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
gi|241928250|gb|EES01395.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
Length = 560
Score = 541 bits (1395), Expect = e-151, Method: Compositional matrix adjust.
Identities = 263/474 (55%), Positives = 348/474 (73%), Gaps = 9/474 (1%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLED-DSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG+ NSL PC++EQF +G+P++L D D T + +K+ SVKAGGMMS AID+ G
Sbjct: 91 GQLGYGDQNSLFPCLVEQFQDLGSPETLNDEDQNTRDQTCLKLSSVKAGGMMSFAIDSLG 150
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
LWMWG+CP + G + SS P PVWDFHGHTVVKVACG+EHVVA VS GETY
Sbjct: 151 GLWMWGSCP--QQTDAGELCISSSSIPLPVWDFHGHTVVKVACGNEHVVAAVSVGETYTE 208
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
DLVCY+WG NN+GQLGLGD+ESR RP +I F++ S W VYE+ CG+ HTA+L ++K
Sbjct: 209 GDLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACGASHTAVLANKKS- 267
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+D +ES CWTFGLG+ GQLGHGTT + P+ V LP +L+S+DCGLFHT++VSS G+
Sbjct: 268 SDQIESRCWTFGLGDKGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLFHTTIVSSDGE 327
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW WGME+GLGLCP+AS + + GDA+ PI + +G +F PVQ++CGAAHTVLV
Sbjct: 328 VWCWGMERGLGLCPDASFSGVDEGDALYPIRVQSPETNGFRFLGPVQISCGAAHTVLVAG 387
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ-DELNTGGLDDEIKTKDLE 390
DGY++W+WGRGRSGVLG G+T D + P +V+WPPL E F++ E GG + +
Sbjct: 388 DGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFQEIHEDQAGGSTSRVNDRT-- 445
Query: 391 GAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI 450
+ E +KLS+A EE++ L+SKL++MERYA+ILH SIF KP E+ +P SL++ FDI
Sbjct: 446 -STELTQKLSAASEELQFLRSKLTLMERYANILHISIFRKPL-DERALPRSLQESSVFDI 503
Query: 451 TKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
KE+EN+L++AD +L RLE FYR+ML+GVKDKL+KRR+QE+V +C+ S + G+
Sbjct: 504 RKEFENILDAADTDELNRLEIFYRSMLSGVKDKLLKRRVQEMVQQCIISLSAGR 557
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 126/319 (39%), Gaps = 48/319 (15%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH--- 127
P K+ +V AG +LA+ G ++ WG P T + +P G
Sbjct: 2 PPKVVAVAAGEAHTLALTGDGQVYSWGRGPFGRLGTGREDDELVPTAVAPAVSAGGTPRP 61
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ- 186
V VA G+ H +AL G +SWG N GQLG GD+ S L P ++E F
Sbjct: 62 RFVAVAAGAYHSLALDDEGS--------LWSWGYNLYGQLGYGDQNS-LFPCLVEQFQDL 112
Query: 187 DSPWAVYEVTCGSF-HTALLTHRKRPNDMLE------SMCWTFG-LGENGQLGHGTTQSA 238
SP + + + T L + M+ W +G + G S+
Sbjct: 113 GSPETLNDEDQNTRDQTCLKLSSVKAGGMMSFAIDSLGGLWMWGSCPQQTDAGELCISSS 172
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS--------WGMEK--GLGLCPNAS 288
+P V + + +V V CG H S G+ ++ WG LGL S
Sbjct: 173 SIPLPVWDFHGHT-VVKVACGNEHVVAAVSVGETYTEGDLVCYAWGNNNHGQLGLGDKES 231
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG------YKLWSWGRG 342
+R P+LIS G ++ ++ACGA+HT ++ + + W++G G
Sbjct: 232 RSR--------PVLISAFS-EGSSWE-VYEIACGASHTAVLANKKSSDQIESRCWTFGLG 281
Query: 343 RSGVLGTGKTIDFFAPAIV 361
G LG G T +P V
Sbjct: 282 DKGQLGHGTTATICSPQPV 300
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 69/142 (48%), Gaps = 25/142 (17%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-----AISPILISGNG 307
+V+V G HT ++ G V+SWG +G P L D A++P + +G
Sbjct: 5 VVAVAAGEAHTLALTGDGQVYSWG--RG----PFGRLGTGREDDELVPTAVAPAVSAGGT 58
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
P P+F V VA GA H++ + D+G LWSWG G LG G F P L
Sbjct: 59 PR-PRF---VAVAAGAYHSLALDDEG-SLWSWGYNLYGQLGYGDQNSLF-------PCLV 106
Query: 368 EEFKQDELNTGGLDDEIK-TKD 388
E+F QD + L+DE + T+D
Sbjct: 107 EQF-QDLGSPETLNDEDQNTRD 127
>gi|297807193|ref|XP_002871480.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
gi|297317317|gb|EFH47739.1| hypothetical protein ARALYDRAFT_487995 [Arabidopsis lyrata subsp.
lyrata]
Length = 554
Score = 529 bits (1362), Expect = e-147, Method: Compositional matrix adjust.
Identities = 271/472 (57%), Positives = 328/472 (69%), Gaps = 28/472 (5%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF G NSL PC+I+ GA S +DS ++ +K+C+VKAG MMSLAIDN G
Sbjct: 105 GQLGFDGENSLAPCLIKNLFEQGASISSLNDSGREARSDLKVCAVKAGSMMSLAIDNVGG 164
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
LWMWGN P DS + S S P P+ DFHG TV+KVACG EHVVALV G+ K
Sbjct: 165 LWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDINKDN 224
Query: 153 DL---VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
V YSWG N++GQLG+GDRESR RP+I+ETFNQ+S VYE+ CG+ HTALLT++K
Sbjct: 225 SYDVSVLYSWGNNHHGQLGVGDRESRPRPQIVETFNQNSGLTVYEIACGAHHTALLTYKK 284
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
S+CWTFG GENGQLGH + +S +PE V ELP++ YLVSVDCGLFHTSVVSS
Sbjct: 285 E-TPKGPSICWTFGFGENGQLGHRSNKSLSIPEPVSELPEHAYLVSVDCGLFHTSVVSSE 343
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G VWSWGME+GLGLCP+ + T EAGD P IS G +F+DPVQV+CGAAHTVLV
Sbjct: 344 GYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISA----GSRFRDPVQVSCGAAHTVLV 399
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDL 389
D GYKLWSWGRGR+GVLGTG D + P +V WP E+K
Sbjct: 400 ADGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWP-----------------YELKP--- 439
Query: 390 EGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFD 449
E E D S++ EE+K L+SKL VMERYASILHGSIFGKPF E+DIP SL+ G+FD
Sbjct: 440 EKEEVPDADKSASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIPYSLRVSGYFD 499
Query: 450 ITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSST 501
+ KEW MLESAD+S+L+RL+ FY +M+ VKDK+++RRIQEI+ +CL SS
Sbjct: 500 MGKEWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMRDCLQSSA 551
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 103/285 (36%), Gaps = 62/285 (21%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
P+ + ++ +A G H +AL G YSWG G+LG G L P
Sbjct: 9 PIPEDLSRKIISLAAGEAHTIALTGDG--------CVYSWGRGMFGRLGTGKESDELVPV 60
Query: 180 IIE----TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+E + + + G++H+ ++ + W +G GQLG
Sbjct: 61 RVEFEFPNQAEGDRIRIVGIAAGAYHSLAVSD--------DGSVWCWGYNIYGQLGF-DG 111
Query: 236 QSALVPEQVKELPQY-----------------VYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++L P +K L + + + +V G + + + G +W WG
Sbjct: 112 ENSLAPCLIKNLFEQGASISSLNDSGREARSDLKVCAVKAGSMMSLAIDNVGGLWMWGNV 171
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-------D 331
P+ L+ PI HG + ++VACG H V + D
Sbjct: 172 PPQDSEPDPRLSFTSI-----PIPFPILDFHG---RTVLKVACGDEHVVALVGPGDINKD 223
Query: 332 DGYK---LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQD 373
+ Y L+SWG G LG G P IV E F Q+
Sbjct: 224 NSYDVSVLYSWGNNHHGQLGVGDRESRPRPQIV------ETFNQN 262
>gi|7573415|emb|CAB87718.1| putative protein [Arabidopsis thaliana]
Length = 541
Score = 525 bits (1352), Expect = e-146, Method: Compositional matrix adjust.
Identities = 271/482 (56%), Positives = 330/482 (68%), Gaps = 28/482 (5%)
Query: 23 CYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGM 82
Y SL DGQLGF G NSL PC+I+ S +DS + +K+C+VKAG M
Sbjct: 82 AYHSL-AVSDGQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSM 140
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
MSLAIDN G LWMWGN P DS + S S P P+ DFHG TV+KVACG EHVVAL
Sbjct: 141 MSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVAL 200
Query: 143 VSAGETYKGEDL---VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS 199
V G+ +K V YSWG N++GQLGLGD ESR RP+ +ETFNQ S VY++ CG+
Sbjct: 201 VGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGA 260
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
HTALLT+RK S+CWTFG GENGQLGH + +S+ +PE V +LP++ YLVSVDCG
Sbjct: 261 HHTALLTYRKE-TPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCG 319
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
LFHTSVVSS G VWSWGME+GLGLCP+ + T EAGD P ISG +F+DPVQV
Sbjct: 320 LFHTSVVSSEGYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSS---RFRDPVQV 376
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGG 379
+CGAAHTVLV D GYKLWSWGRGR+GVLGTG D + P +V WP
Sbjct: 377 SCGAAHTVLVVDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWP--------------- 421
Query: 380 LDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIP 439
+E+K E E D+ S++ EE+K L+SKL VMERYASILHGSIFGKPF E+DIP
Sbjct: 422 --NELKP---EKEEVPDDGKSASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIP 476
Query: 440 ISLKDMGFFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHS 499
SL+ G+FD+ KEW MLESAD+S+L+RL+ FY +M+ VKDK+++RRIQEI+ +CL S
Sbjct: 477 YSLRVSGYFDMGKEWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMKDCLQS 536
Query: 500 ST 501
S
Sbjct: 537 SA 538
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 60/247 (24%), Positives = 95/247 (38%), Gaps = 36/247 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ-- 186
++ +A G H +AL G YSWG G+LG G L P ++E NQ
Sbjct: 18 IISLAAGEAHTIALTGDG--------CVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAE 69
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESM--CWTFGLGENGQLGHGTTQSALVPEQV 244
+ V G++H+ ++ + D S+ C L E T S+ + +
Sbjct: 70 GDRIRIVGVAAGAYHSLAVSDGQLGFDGENSLAPCLIKNLFER------ETSSSSLNDSG 123
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+E+ + + +V G + + + G +W WG P+ L+ PI
Sbjct: 124 REVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLSFTSI-----PIPFP 178
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVT-------DDGYK---LWSWGRGRSGVLGTGKTID 354
HG + ++VACG H V + D+ Y L+SWG G LG G
Sbjct: 179 ILDFHG---RTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWGNNHHGQLGLGDGES 235
Query: 355 FFAPAIV 361
P V
Sbjct: 236 RARPQTV 242
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
+ +A G AHT+ +T DG ++SWGRG G LGTGK D P +V +P E
Sbjct: 19 ISLAAGEAHTIALTGDGC-VYSWGRGMFGRLGTGKESDELVPVLVEFPNQAE 69
>gi|18416604|ref|NP_568250.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|16604485|gb|AAL24248.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|18958034|gb|AAL79590.1| AT5g11580/F15N18_170 [Arabidopsis thaliana]
gi|332004314|gb|AED91697.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 553
Score = 522 bits (1344), Expect = e-145, Method: Compositional matrix adjust.
Identities = 267/472 (56%), Positives = 326/472 (69%), Gaps = 27/472 (5%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF G NSL PC+I+ S +DS + +K+C+VKAG MMSLAIDN G
Sbjct: 103 GQLGFDGENSLAPCLIKNLFERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGG 162
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
LWMWGN P DS + S S P P+ DFHG TV+KVACG EHVVALV G+ +K
Sbjct: 163 LWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDN 222
Query: 153 DL---VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
V YSWG N++GQLGLGD ESR RP+ +ETFNQ S VY++ CG+ HTALLT+RK
Sbjct: 223 SYDVSVLYSWGNNHHGQLGLGDGESRARPQTVETFNQKSGLTVYDIACGAHHTALLTYRK 282
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
S+CWTFG GENGQLGH + +S+ +PE V +LP++ YLVSVDCGLFHTSVVSS
Sbjct: 283 E-TPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSE 341
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G VWSWGME+GLGLCP+ + T EAGD P ISG +F+DPVQV+CGAAHTVLV
Sbjct: 342 GYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSS---RFRDPVQVSCGAAHTVLV 398
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDL 389
D GYKLWSWGRGR+GVLGTG D + P +V WP +E+K
Sbjct: 399 VDGGYKLWSWGRGRNGVLGTGNVSDCYVPTLVFWP-----------------NELKP--- 438
Query: 390 EGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFD 449
E E D+ S++ EE+K L+SKL VMERYASILHGSIFGKPF E+DIP SL+ G+FD
Sbjct: 439 EKEEVPDDGKSASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIPYSLRVSGYFD 498
Query: 450 ITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSST 501
+ KEW MLESAD+S+L+RL+ FY +M+ VKDK+++RRIQEI+ +CL SS
Sbjct: 499 MGKEWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMKDCLQSSA 550
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 61/261 (23%), Positives = 96/261 (36%), Gaps = 52/261 (19%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ-- 186
++ +A G H +AL G YSWG G+LG G L P ++E NQ
Sbjct: 18 IISLAAGEAHTIALTGDG--------CVYSWGRGMFGRLGTGKESDELVPVLVEFPNQAE 69
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--------------- 231
+ V G++H+ ++ + W +G GQLG
Sbjct: 70 GDRIRIVGVAAGAYHSLAVSD--------DGSVWCWGYNIYGQLGFDGENSLAPCLIKNL 121
Query: 232 -HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
T S+ + + +E+ + + +V G + + + G +W WG P+ L+
Sbjct: 122 FERETSSSSLNDSGREVGSDLKVCTVKAGSMMSLAIDNVGGLWMWGNVPPQDSEPDPRLS 181
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-------DDGYK---LWSWG 340
PI HG + ++VACG H V + D+ Y L+SWG
Sbjct: 182 FTSI-----PIPFPILDFHG---RTVLKVACGDEHVVALVGPGDIHKDNSYDVSVLYSWG 233
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
G LG G P V
Sbjct: 234 NNHHGQLGLGDGESRARPQTV 254
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
+ +A G AHT+ +T DG ++SWGRG G LGTGK D P +V +P E
Sbjct: 19 ISLAAGEAHTIALTGDGC-VYSWGRGMFGRLGTGKESDELVPVLVEFPNQAE 69
Score = 40.0 bits (92), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 14/98 (14%)
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
++D + + G HT LT + +++G G G+LG G LVP
Sbjct: 10 ISEDLSRKIISLAAGEAHTIALTG--------DGCVYSWGRGMFGRLGTGKESDELVPVL 61
Query: 244 VKELPQ-----YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
V E P + +V V G +H+ VS G VW WG
Sbjct: 62 V-EFPNQAEGDRIRIVGVAAGAYHSLAVSDDGSVWCWG 98
>gi|21554872|gb|AAM63715.1| unknown [Arabidopsis thaliana]
Length = 553
Score = 521 bits (1341), Expect = e-145, Method: Compositional matrix adjust.
Identities = 266/472 (56%), Positives = 327/472 (69%), Gaps = 27/472 (5%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF G NSL PC+++ A S +DS ++ +K+ +VKAG MMSLAIDN G
Sbjct: 103 GQLGFDGENSLAPCLVKNLFEQEASSSSLNDSGREARSDLKVGTVKAGSMMSLAIDNVGG 162
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
LWMWGN P DS + S S P P+ DFHG TV+KVACG EHVVALV G+ +K
Sbjct: 163 LWMWGNVPPQDSEPDPRLSFTSIPIPFPILDFHGRTVLKVACGDEHVVALVGPGDIHKDN 222
Query: 153 DL---VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
V YSWG N++GQLGLGD ESR RP+I+ETFNQ+S + VY + CG+ HTALLT+RK
Sbjct: 223 SYDVSVLYSWGNNHHGQLGLGDSESRARPQIVETFNQNSGFTVYNIACGAHHTALLTYRK 282
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
S+CWTFG GENGQLGH + +S+ +PE V +LP++ YLVSVDCGLFHTSVVSS
Sbjct: 283 E-TPKGPSICWTFGFGENGQLGHRSNKSSSLPEPVSDLPEHAYLVSVDCGLFHTSVVSSE 341
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G VWSWGME+GLGLCP+ + T EAGD P ISG +F+DPVQV+CGAAHTVLV
Sbjct: 342 GYVWSWGMERGLGLCPDVNFTEVEAGDDSVPRKISGGSS---RFRDPVQVSCGAAHTVLV 398
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDL 389
D GYKLWSWGRGR+ VLGTG D P +V WP +E+K
Sbjct: 399 ADGGYKLWSWGRGRNRVLGTGXVSDXXVPTLVFWP-----------------NELKP--- 438
Query: 390 EGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFD 449
E E D+ S++ EE+K L+SKL VMERYASILHGSIFGKPF E+DIP SL+ G+FD
Sbjct: 439 EKEEVPDDGKSASTEEIKRLESKLMVMERYASILHGSIFGKPFNEEEDIPYSLRVSGYFD 498
Query: 450 ITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHSST 501
+ KEW MLESAD+S+L+RL+ FY +M+ VKDK+++RRIQEI+ +CL SS
Sbjct: 499 MGKEWGEMLESADKSQLMRLQAFYEDMIGRVKDKVLQRRIQEIMKDCLQSSA 550
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 105/283 (37%), Gaps = 60/283 (21%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
P+ + ++ +A G H +AL G YSWG G+LG G L P
Sbjct: 9 PISEDLSRKIISLAAGEAHTIALTGDG--------CVYSWGRGMFGRLGTGKESDELVPV 60
Query: 180 IIETFNQ--DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+E NQ + V G++H+ ++ + W +G GQLG ++
Sbjct: 61 RVEFPNQAEGERIRIIGVAAGAYHSLAVSD--------DGSVWCWGYNIYGQLGF-DGEN 111
Query: 238 ALVPEQVKELPQY-----------------VYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
+L P VK L + + + +V G + + + G +W WG
Sbjct: 112 SLAPCLVKNLFEQEASSSSLNDSGREARSDLKVGTVKAGSMMSLAIDNVGGLWMWGNVPP 171
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-------DDG 333
P+ L+ PI HG + ++VACG H V + D+
Sbjct: 172 QDSEPDPRLSFTSI-----PIPFPILDFHG---RTVLKVACGDEHVVALVGPGDIHKDNS 223
Query: 334 YK---LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQD 373
Y L+SWG G LG G + P IV E F Q+
Sbjct: 224 YDVSVLYSWGNNHHGQLGLGDSESRARPQIV------ETFNQN 260
>gi|222619187|gb|EEE55319.1| hypothetical protein OsJ_03316 [Oryza sativa Japonica Group]
Length = 547
Score = 519 bits (1336), Expect = e-144, Method: Compositional matrix adjust.
Identities = 253/454 (55%), Positives = 338/454 (74%), Gaps = 16/454 (3%)
Query: 57 PDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
P++L+ +++ ++ ++ +K+ SVKAGGMMS AID GA+WMWGNCP + G F + S
Sbjct: 101 PETLQSEAQNSSTQSSLKLSSVKAGGMMSFAIDTLGAMWMWGNCP--QQTDAGEFCIAPS 158
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P PVWDFHGHTVVKVACG+EHVVA VSAGETY G DLVCY+WG NN+GQLGLGD+ESR
Sbjct: 159 CVPLPVWDFHGHTVVKVACGNEHVVAAVSAGETYTGGDLVCYAWGNNNHGQLGLGDKESR 218
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
RP +I F++ S W VYE+ CG++HTA+LT++K + LES CWTFGLG+NGQLGHGTT
Sbjct: 219 SRPVLISAFSEGSSWEVYEIACGTWHTAVLTNKKSFDVDLESRCWTFGLGDNGQLGHGTT 278
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+ P+ V LP +L+S+DCGLFHT+VVSS G+VW WGME+GLGLCP+AS + ++G
Sbjct: 279 ATICSPQPVDGLPTGSFLISLDCGLFHTTVVSSDGEVWCWGMERGLGLCPDASFSGVDSG 338
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
DA+ PI + +G KF VQV CGAAHTVLV DGY++W+WGRGRSGVLG +T D
Sbjct: 339 DALRPIRVQSPETNGFKFLGAVQVTCGAAHTVLVAGDGYRMWAWGRGRSGVLGRNQTADS 398
Query: 356 FAPAIVLWPPLTEEFKQ-----DELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQ 410
+ P +V+WPPL E F++ + +T G++D + E ++KLS+A EE++ L+
Sbjct: 399 YIPCVVMWPPLDENFQEIHEDRAQASTSGVND-------RNSAELEQKLSAASEELEFLR 451
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLVRLE 470
SKL++MERYA+ILH SIF KP E+ +P SL++ FDI KE+EN+L++A +L RLE
Sbjct: 452 SKLTLMERYANILHISIFRKPL-DERTLPRSLQESPVFDIRKEFENILDTAGTDELNRLE 510
Query: 471 RFYRNMLAGVKDKLMKRRIQEIVNECLHSSTIGK 504
FYR+ML+GVKDKL+KRR+QE+V EC+ S + G+
Sbjct: 511 IFYRSMLSGVKDKLLKRRVQEMVQECIVSLSSGR 544
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 91/244 (37%), Gaps = 35/244 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VA G H +AL GE Y SWG G+LG G P ++ +
Sbjct: 5 VVAVAAGEAHTLALTGDGEVY--------SWGRGMFGRLGTGREADEHVPTVVAAGGRPR 56
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKEL 247
P V V G++H+ L + L T GL + ++ H T + Q
Sbjct: 57 PRFV-AVASGAYHSLALDDHANISVPLNFCAVTTGLFDMMKIWVHPETLQS--EAQNSST 113
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD---AISPILIS 304
+ L SV G + + + G +W WG CP + +AG+ A S + +
Sbjct: 114 QSSLKLSSVKAGGMMSFAIDTLGAMWMWGN------CPQ----QTDAGEFCIAPSCVPLP 163
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL-------WSWGRGRSGVLGTGKTIDFFA 357
HG V+VACG H V G ++WG G LG G
Sbjct: 164 VWDFHG---HTVVKVACGNEHVVAAVSAGETYTGGDLVCYAWGNNNHGQLGLGDKESRSR 220
Query: 358 PAIV 361
P ++
Sbjct: 221 PVLI 224
>gi|219885483|gb|ACL53116.1| unknown [Zea mays]
gi|224034505|gb|ACN36328.1| unknown [Zea mays]
gi|414880673|tpg|DAA57804.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein isoform 1 [Zea mays]
gi|414880674|tpg|DAA57805.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein isoform 2 [Zea mays]
Length = 416
Score = 503 bits (1295), Expect = e-140, Method: Compositional matrix adjust.
Identities = 244/420 (58%), Positives = 317/420 (75%), Gaps = 13/420 (3%)
Query: 82 MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
MMSLAID+ G+LWMWG+CP + G F + SS P PVWDFHGHTVVKVACG+EHVVA
Sbjct: 1 MMSLAIDSLGSLWMWGSCP--QQTDAGEFCISSSSIPLPVWDFHGHTVVKVACGNEHVVA 58
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
VSAGETY G DLVCY+WG NN+GQLGLGD+ESR RP +I F++ S W VYE+ CG+ H
Sbjct: 59 AVSAGETYTGGDLVCYAWGNNNHGQLGLGDKESRSRPVLISAFSEGSSWEVYEIACGASH 118
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
TA+L ++K D +ES CWTFGLG+ GQLGHGTT + P+ V LP +L+S+DCGLF
Sbjct: 119 TAVLANKK-STDQIESRCWTFGLGDKGQLGHGTTATICSPQPVDGLPTGSFLISLDCGLF 177
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT+VVSS G+VW WGME+GLGLCP+AS + + GDA+ PI + +G KF PVQ+AC
Sbjct: 178 HTTVVSSDGEVWCWGMERGLGLCPDASFSGVDEGDALYPIRVQSPETNGFKFLGPVQIAC 237
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDEL--NTGG 379
GAAHTVLV DGY++W+WGRGRSGVLG G+T D + P +V+WPPL E F +D++ +T
Sbjct: 238 GAAHTVLVAGDGYRMWAWGRGRSGVLGRGQTADSYIPCVVMWPPLDENFHEDQMGGSTSR 297
Query: 380 LDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGKPFAAEQDIP 439
++D T E ++KLS+A EE++ L+SKL++MERYA+ILH SIF KP E+ +P
Sbjct: 298 VNDHTST-------ELEQKLSAASEELQFLRSKLTLMERYANILHISIFRKPL-DERALP 349
Query: 440 ISLKDMGFFDITKEWENMLESADRSKLVRLERFYRNMLAGVKDKLMKRRIQEIVNECLHS 499
SL++ FDI KE+EN+L++AD +L RLE FYR+ML+GVKDKL+KRR++E+V +C+ S
Sbjct: 350 RSLQESSVFDIRKEFENILDAADTDELNRLEIFYRSMLSGVKDKLLKRRVREMVQQCIIS 409
>gi|357436203|ref|XP_003588377.1| Regulator of chromosome condensation family protein [Medicago
truncatula]
gi|355477425|gb|AES58628.1| Regulator of chromosome condensation family protein [Medicago
truncatula]
Length = 433
Score = 434 bits (1116), Expect = e-119, Method: Compositional matrix adjust.
Identities = 223/378 (58%), Positives = 277/378 (73%), Gaps = 33/378 (8%)
Query: 24 YTSLNCCMDGQLGFSGSN-----SLVPCVIEQFLTIGAPDS----LEDDSKTNHKAPIKI 74
Y SL DG + G N S+VPC++ +FL + PDS LE+ KA +KI
Sbjct: 76 YHSLALADDGSVWCWGYNLYGYYSVVPCLLNKFLELHPPDSSTLLLEE---VEGKAQLKI 132
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
S+KAGGMMSL+IDN GALWMWGNCP S EG FS+VS+FTP+PVWDFHGHTVVKVAC
Sbjct: 133 ISIKAGGMMSLSIDNLGALWMWGNCP--HQSKEGIFSIVSNFTPTPVWDFHGHTVVKVAC 190
Query: 135 GSEHVVALVSAGETYKGE--DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G+EH++ALVS GE+Y GE DL+CYSWG NN+GQLGLGD E R P++++TF+QDS W++
Sbjct: 191 GNEHIIALVSVGESYNGENDDLICYSWGNNNHGQLGLGDTEDRPNPEMVKTFDQDSHWSI 250
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
YE+ CG+FHTA +CWTFGLGENGQLGHGTTQS +PE V+ELPQ+V
Sbjct: 251 YEIACGAFHTAF-------------VCWTFGLGENGQLGHGTTQSTSIPELVQELPQFVN 297
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
LVSVDCGLFHT VVSS GDVWSWGMEKGLGL P+A + + DA+SP+++S P+ K
Sbjct: 298 LVSVDCGLFHTCVVSSDGDVWSWGMEKGLGLYPDARVVGEYSSDALSPLVVS--NPYEAK 355
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE--F 370
F +PVQVACGAAHT++V +GYK+WS GRGRSGVLG G +D + P +VLWPPL E+ F
Sbjct: 356 FLEPVQVACGAAHTIIVAQEGYKVWSLGRGRSGVLGNGNVVDCYIPTLVLWPPLVEDFHF 415
Query: 371 KQDELNTGGLDDEIKTKD 388
KQ+E ++ D+ K +D
Sbjct: 416 KQEEPSSFRELDKGKEED 433
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 105/270 (38%), Gaps = 63/270 (23%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V VA G H + L G Y SWG G+LGLG + +L P ++ +Q+S
Sbjct: 14 VTAVAAGEAHTLLLAGDGRVY--------SWGRGTLGRLGLGSEQDQLFPAQVKFGSQES 65
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG----------HGTTQSA 238
+ + G++H+ L D CW + L + H S
Sbjct: 66 I-RIVGIAAGAYHSLALA------DDGSVWCWGYNLYGYYSVVPCLLNKFLELHPPDSST 118
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
L+ E+V+ Q + ++S+ G + + + G +W WG CP+ S + I
Sbjct: 119 LLLEEVEGKAQ-LKIISIKAGGMMSLSIDNLGALWMWGN------CPHQS------KEGI 165
Query: 299 SPILISGNGP------HGPKFQDPVQVACGAAHTVLVT---------DDGYKLWSWGRGR 343
I +S P HG V+VACG H + + +D +SWG
Sbjct: 166 FSI-VSNFTPTPVWDFHG---HTVVKVACGNEHIIALVSVGESYNGENDDLICYSWGNNN 221
Query: 344 SGVLGTGKTIDFFAPAIVLWPPLTEEFKQD 373
G LG G T D P +V + F QD
Sbjct: 222 HGQLGLGDTEDRPNPEMV------KTFDQD 245
>gi|217074694|gb|ACJ85707.1| unknown [Medicago truncatula]
gi|388497904|gb|AFK37018.1| unknown [Medicago truncatula]
Length = 389
Score = 382 bits (980), Expect = e-103, Method: Compositional matrix adjust.
Identities = 182/277 (65%), Positives = 223/277 (80%), Gaps = 7/277 (2%)
Query: 33 GQLGF----SGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAID 88
GQLG SLVPC++ +FL + +S D S+ KA +++C+VKAGGMMSLAID
Sbjct: 103 GQLGLCEEEDSHGSLVPCLLSRFLELQPHNSSTDPSEAEDKASLEMCTVKAGGMMSLAID 162
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
N G LWMWGN +P S E G SLVSSFTP+PVWDFHG TVVKVACG+EHVVALV+A ++
Sbjct: 163 NRGTLWMWGN--IPQESKESGISLVSSFTPTPVWDFHGRTVVKVACGNEHVVALVNAIDS 220
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
++ EDL+CYSWG N++GQLGLGDR+SRL P++++ +++SPW +YEV CG+FHTALL H+
Sbjct: 221 HEDEDLLCYSWGYNSHGQLGLGDRQSRLHPEVVKILDEESPWTIYEVACGAFHTALLAHK 280
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
K+P+ LESMCWTFGLGENGQLGHGTTQS L P VKELPQ ++L+SVDCGLFHTSVVSS
Sbjct: 281 KKPDATLESMCWTFGLGENGQLGHGTTQSTLFPTPVKELPQSIHLISVDCGLFHTSVVSS 340
Query: 269 AGDVWSWGMEKGLGLCPNASLTR-NEAGDAISPILIS 304
GDVWSWGMEKGLGLCP+A+ N GDA+SP+LIS
Sbjct: 341 TGDVWSWGMEKGLGLCPDANRAETNSGGDALSPLLIS 377
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 87/344 (25%), Positives = 135/344 (39%), Gaps = 59/344 (17%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
S+ C G G G+ S + + L G P+ +D +KI + AG +L
Sbjct: 35 SVYCWGRGMFGRLGNGSQKDELFPKKLNFGNPNGTQDS--------VKIVGIAAGSYHTL 86
Query: 86 AIDNAGALWMWGN--------CPLPDSSTEGGFSLVSSF----------TPSPVWDFHGH 127
A+ G++W WG C DS L+S F PS D
Sbjct: 87 ALAEDGSVWCWGYNIYGQLGLCEEEDSHGSLVPCLLSRFLELQPHNSSTDPSEAEDKASL 146
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ V G +A+ + G + W G + +ES + ++ +F
Sbjct: 147 EMCTVKAGGMMSLAIDNRG--------TLWMW-----GNIPQESKESGI--SLVSSFTPT 191
Query: 188 SPW-----AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
W V +V CG+ H L + ++ + +C+++G +GQLG G QS L PE
Sbjct: 192 PVWDFHGRTVVKVACGNEHVVALVNAIDSHEDEDLLCYSWGYNSHGQLGLGDRQSRLHPE 251
Query: 243 QVK----ELPQYVYLVSVDCGLFHTSVVSSAG--DVWSWGMEKGLGLCPNASLTRNEAGD 296
VK E P +Y V+ CG FHT++++ D M GL N L
Sbjct: 252 VVKILDEESPWTIYEVA--CGAFHTALLAHKKKPDATLESMCWTFGLGENGQLGHGTTQS 309
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+ P + P+ + V CG HT +V+ G +WSWG
Sbjct: 310 TLFPTPVK----ELPQSIHLISVDCGLFHTSVVSSTG-DVWSWG 348
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 104/281 (37%), Gaps = 72/281 (25%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+P D H +V VA G H + L ED Y WG G+LG G ++ L
Sbjct: 8 PNP--DNPSHKIVDVAAGESHTLLLT--------EDGSVYCWGRGMFGRLGNGSQKDELF 57
Query: 178 PKIIETFN----QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-- 231
PK + N QDS + + GS+HT L + W +G GQLG
Sbjct: 58 PKKLNFGNPNGTQDSV-KIVGIAAGSYHTLALAE--------DGSVWCWGYNIYGQLGLC 108
Query: 232 -----HGTTQSALVPEQVKELPQ-------------YVYLVSVDCGLFHTSVVSSAGDVW 273
HG+ L+ ++ P + + +V G + + + G +W
Sbjct: 109 EEEDSHGSLVPCLLSRFLELQPHNSSTDPSEAEDKASLEMCTVKAGGMMSLAIDNRGTLW 168
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP------HGPKFQDPVQVACGAAHTV 327
WG N E+G + L+S P HG + V+VACG H V
Sbjct: 169 MWG---------NIPQESKESGIS----LVSSFTPTPVWDFHG---RTVVKVACGNEHVV 212
Query: 328 LVT-------DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ D+ +SWG G LG G P +V
Sbjct: 213 ALVNAIDSHEDEDLLCYSWGYNSHGQLGLGDRQSRLHPEVV 253
>gi|168025763|ref|XP_001765403.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683456|gb|EDQ69866.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 550
Score = 271 bits (693), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 167/425 (39%), Positives = 229/425 (53%), Gaps = 56/425 (13%)
Query: 28 NCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIK---ICSVKAGGMMS 84
N C+ QL S SL C + T+ +K H++P++ I V AGGMMS
Sbjct: 101 NACI--QLTQSLDTSLSACSLTNTWTVSLV------AKRPHRSPLRLSLIVLVAAGGMMS 152
Query: 85 LAIDNAGALWMWGNCPLP----DSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
AID GALW+WG P P DS FS+ + P V G V +VACG+EH++
Sbjct: 153 SAIDVDGALWLWGAVPNPSEFADSHCRNSFSITNIEKPERVRGLLGLRVYRVACGNEHII 212
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
A+V E D CY+WG N GQLGLGD R P++++ + ++ CG+F
Sbjct: 213 AVV---EGRDNVDPDCYAWGNNQFGQLGLGDFRDRSYPQVVKALAASVVGPILDLACGAF 269
Query: 201 HTALLTHRK-RPNDMLE----------SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
HTA+L + +P D+L+ S+CWTFG GENGQLG GT +S +P V+ LP
Sbjct: 270 HTAILAGKDDQPTDLLQEPNSPTRRRISVCWTFGQGENGQLGQGTKESQALPAPVEGLPN 329
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG--NG 307
L +V CGLFHT+VV+ GDVW WGME GLGLCPN + +GDA+ P+ + G +G
Sbjct: 330 E-RLTTVACGLFHTAVVTETGDVWVWGMEGGLGLCPNIGPPGSRSGDAVFPVRVFGESSG 388
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP-- 365
P + CGAAHTV +++ G +W+WGRG++GVLG G T D + P VLWPP
Sbjct: 389 TCNP-VSGSKGITCGAAHTVTLSNGGKDIWAWGRGQNGVLGVGHTSDCWFPCPVLWPPVS 447
Query: 366 LTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHG 425
L F+Q N ++S E +K LQ +L + RYA LH
Sbjct: 448 LAPWFEQSVEN---------------------PVASEEETLKTLQKELVEVRRYAESLHA 486
Query: 426 SIFGK 430
+++G+
Sbjct: 487 AVYGE 491
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 85/330 (25%), Positives = 131/330 (39%), Gaps = 63/330 (19%)
Query: 47 VIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG--NCPLPDS 104
+I +++IG L D K K+ V AG +L + G++W WG C
Sbjct: 53 LIPTYISIG---HLRDKDKEEGVVK-KVTQVAAGAYHNLVLTADGSMWSWGYNACIQLTQ 108
Query: 105 STEGGF---SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE---DLVCYS 158
S + SL +++T S V + ++++ ++ LV+AG D +
Sbjct: 109 SLDTSLSACSLTNTWTVSLVAKRPHRSPLRLS-----LIVLVAAGGMMSSAIDVDGALWL 163
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSP--------WAVYEVTCGSFHTALLTHRKR 210
WGA N D R I N + P VY V CG+ H + +
Sbjct: 164 WGAVPNPS-EFADSHCRNSFSIT---NIEKPERVRGLLGLRVYRVACGNEHIIAVVEGR- 218
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSS 268
D ++ C+ +G + GQLG G + P+ VK L V ++ + CG FHT++++
Sbjct: 219 --DNVDPDCYAWGNNQFGQLGLGDFRDRSYPQVVKALAASVVGPILDLACGAFHTAILAG 276
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD---------PVQ- 318
D L PN+ R IS G G +G Q PV+
Sbjct: 277 KDD-----QPTDLLQEPNSPTRRR-----ISVCWTFGQGENGQLGQGTKESQALPAPVEG 326
Query: 319 --------VACGAAHTVLVTDDGYKLWSWG 340
VACG HT +VT+ G +W WG
Sbjct: 327 LPNERLTTVACGLFHTAVVTETG-DVWVWG 355
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 56/264 (21%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET---F 184
TVV+V G H +AL + G Y SWG G+L +G + L P I
Sbjct: 13 TVVQVVAGESHTLALTAVGSVY--------SWGRGLFGKLRVGASQDELIPTYISIGHLR 64
Query: 185 NQDSPWAVY----EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS--- 237
++D V +V G++H +LT + W++G QL S
Sbjct: 65 DKDKEEGVVKKVTQVAAGAYHNLVLT--------ADGSMWSWGYNACIQLTQSLDTSLSA 116
Query: 238 ---------ALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGM-----EKGLG 282
+LV ++ P + L V V G +S + G +W WG E
Sbjct: 117 CSLTNTWTVSLVAKRPHRSPLRLSLIVLVAAGGMMSSAIDVDGALWLWGAVPNPSEFADS 176
Query: 283 LCPNA-SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL----W 337
C N+ S+T E + + +L G + +VACG H + V + + +
Sbjct: 177 HCRNSFSITNIEKPERVRGLL-------GLRV---YRVACGNEHIIAVVEGRDNVDPDCY 226
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIV 361
+WG + G LG G D P +V
Sbjct: 227 AWGNNQFGQLGLGDFRDRSYPQVV 250
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 68/167 (40%), Gaps = 21/167 (12%)
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV- 244
+DS V +V G HT LT +++G G G+L G +Q L+P +
Sbjct: 8 EDSRITVVQVVAGESHTLALT--------AVGSVYSWGRGLFGKLRVGASQDELIPTYIS 59
Query: 245 --------KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP--NASLTRNEA 294
KE + V G +H V+++ G +WSWG + L + SL+
Sbjct: 60 IGHLRDKDKEEGVVKKVTQVAAGAYHNLVLTADGSMWSWGYNACIQLTQSLDTSLSACSL 119
Query: 295 GDAISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+ + L++ P + V VA G + + DG LW WG
Sbjct: 120 TNTWTVSLVAKRPHRSPLRLSLIVLVAAGGMMSSAIDVDG-ALWLWG 165
>gi|168035821|ref|XP_001770407.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678284|gb|EDQ64744.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 588
Score = 253 bits (646), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 160/413 (38%), Positives = 225/413 (54%), Gaps = 41/413 (9%)
Query: 28 NCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI 87
N C+ ++ S+ L+ + E + G +D S + K ++I +V+AGGM+S AI
Sbjct: 100 NACIQLKILHYASSFLLLFIHELRIMDGQLGREKDASHPSSKL-VQIIAVEAGGMISCAI 158
Query: 88 DNAGALWMWGNCPLPDS------STEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
D GALW+WG P P S G FS++ P V G V +VA G+EH+VA
Sbjct: 159 DLDGALWLWGAVPNPSDCSGSRSSGNGSFSVIRVERPEKVRGLLGLRVYRVAVGNEHIVA 218
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
LV E DL CY+WG N GQLGLGD R P++++ + ++ ++ CG+FH
Sbjct: 219 LV---EGRDDSDLDCYAWGNNQFGQLGLGDFRDREYPQVVKALSASVIGSIVDLACGAFH 275
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
TA+L + S+CWTFG GE+GQLG GT+ + P V+ LP L +V CGLF
Sbjct: 276 TAILASFCLEGRL--SVCWTFGQGESGQLGQGTSSNQYFPAPVEGLPNE-RLRTVACGLF 332
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ--- 318
HTSVV+ DVW WGME GLGLCP + GDA SP+ + G+ PV
Sbjct: 333 HTSVVTETDDVWVWGMEGGLGLCPGIGPPGTKTGDAFSPVRVFGDSSASCH---PVMGSK 389
Query: 319 -VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNT 377
+ CGAAHTV +++ G +W+WGRG+SGVLG+G T D + P V+WPP T
Sbjct: 390 GITCGAAHTVTISNGGRDIWAWGRGQSGVLGSGHTSDSWFPCPVIWPPAASA------KT 443
Query: 378 GGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFGK 430
GG E S+ ++E+K +Q +L+ + RYA LH +I+G+
Sbjct: 444 GGQPSEN---------------SAVLDEIKSIQKELAEVRRYAESLHAAIYGE 481
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 99/270 (36%), Gaps = 61/270 (22%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+TVV+VA G H +AL + G Y +WG N G+ G+G + P +
Sbjct: 12 NTVVQVAAGEVHTLALTAVGGVY--------TWGRNLFGRSGIGGVQDGFVPTYVSVGTN 63
Query: 187 ------DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
+ P V +V G+ H LT + + W++G QL S+ +
Sbjct: 64 LDDGDVNRPPKVVQVAAGANHNLALT--------ADGVVWSWGYNACIQLKILHYASSFL 115
Query: 241 PEQVKEL-----------------PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
+ EL + V +++V+ G + + G +W WG
Sbjct: 116 LLFIHELRIMDGQLGREKDASHPSSKLVQIIAVEAGGMISCAIDLDGALWLWGAVPNPSD 175
Query: 284 C--------PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT----D 331
C + S+ R E + + +L G + +VA G H V + D
Sbjct: 176 CSGSRSSGNGSFSVIRVERPEKVRGLL-------GLRV---YRVAVGNEHIVALVEGRDD 225
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG + G LG G D P +V
Sbjct: 226 SDLDCYAWGNNQFGQLGLGDFRDREYPQVV 255
>gi|168024675|ref|XP_001764861.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683897|gb|EDQ70303.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 456
Score = 253 bits (645), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 149/364 (40%), Positives = 209/364 (57%), Gaps = 25/364 (6%)
Query: 15 TCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKA--PI 72
T + F LN MDGQLG + S VI L+ + D +++ + ++ +
Sbjct: 105 TVWSWGFNALLLLNGNMDGQLGRQRAASYPAPVIFPRLSSSSSDENRENAASWNQVVDNV 164
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP-------LPDSSTEGGFSLVSSFTPSPVWDFH 125
+I V+AGGMMS AID G LW+WG P +P+S T F + + P V
Sbjct: 165 QIVQVEAGGMMSSAIDQDGGLWVWGAVPQPAVLDRVPESDT---FEMSNINQPERVLALR 221
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
GH+V ++ACGS+H++AL+ ++ G D CY+WG N GQLGLGD E R+ P I +
Sbjct: 222 GHSVRRIACGSDHILALI---DSRNGVD--CYAWGGNAFGQLGLGDFEPRVIPTKIMSLL 276
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG +H+A++T + L S CWTFG ENGQLG G+ ++ P +V+
Sbjct: 277 AQQVGVVVDLACGYYHSAIVTSGAAGDGRL-STCWTFGQNENGQLGVGSCTNSHTPVEVE 335
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
LP + +V CGLFHT+VV +GDVW WGME GLG CP +++GDA+SP+ + G
Sbjct: 336 ALPTRERIQTVVCGLFHTAVVMESGDVWVWGMEGGLGQCPGIGPPGSKSGDALSPVRVFG 395
Query: 306 NGPHGPKFQDPVQ----VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DPV +ACGAAHTV V++ G LW+WGRG++GVLG G D + P+ V
Sbjct: 396 ---ESSATCDPVTGSKGIACGAAHTVTVSNGGKDLWTWGRGKNGVLGLGHNSDSWFPSPV 452
Query: 362 LWPP 365
LWPP
Sbjct: 453 LWPP 456
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 103/285 (36%), Gaps = 73/285 (25%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
D T V+VA G H +AL + G Y +WG G++G+G + L P ++E
Sbjct: 11 DSGASTAVQVAAGEAHSLALAANGSVY--------TWGRGQFGRMGMGVFQDELEPTLVE 62
Query: 183 ----TFNQDSPWA-----------VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE- 226
+D P A V ++ G++H+ L + W++G
Sbjct: 63 IGMIVDEEDIPLARDDRDSAERTRVTQIAAGAYHSLALAG--------DGTVWSWGFNAL 114
Query: 227 -------NGQLGHGTTQSALVP------------------EQVKELPQYVYLVSVDCGLF 261
+GQLG S P ++ V +V V+ G
Sbjct: 115 LLLNGNMDGQLGRQRAASYPAPVIFPRLSSSSSDENRENAASWNQVVDNVQIVQVEAGGM 174
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH---GPKFQDPVQ 318
+S + G +W WG + A L R D I N P + +
Sbjct: 175 MSSAIDQDGGLWVWGA-----VPQPAVLDRVPESDTFEMSNI--NQPERVLALRGHSVRR 227
Query: 319 VACGAAHTVLVTD--DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ACG+ H + + D +G ++WG G LG G F P ++
Sbjct: 228 IACGSDHILALIDSRNGVDCYAWGGNAFGQLGLGD----FEPRVI 268
>gi|168028029|ref|XP_001766531.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682176|gb|EDQ68596.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 251 bits (640), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 152/421 (36%), Positives = 221/421 (52%), Gaps = 42/421 (9%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSL--EDDSKTNHKAPIKICSVKAGG 81
Y SL DG + G N+ C++ Q L +S +D + + + K+ V+AGG
Sbjct: 99 YHSLALAGDGSVWSWGFNA---CILLQNLHTCQANSTSWNEDCRDSDGSNPKVMVVEAGG 155
Query: 82 MMSLAIDNAGALWMWGNCPLPDSSTE----------GGFSLVSSFTPSPVWDFHGHTVVK 131
MMS A+D+ G LW+WG P P + F L + P V G V +
Sbjct: 156 MMSSAVDDEGGLWLWGAVPEPSAGVRITDSDQYYKSESFELANINQPERVLALRGLKVRR 215
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+EH++ LV + + CYSWG+N GQLGL D E+R P +
Sbjct: 216 VACGNEHILVLVDGPD-----GIACYSWGSNAYGQLGLSDFEARDVPTQVTALAAHQVGV 270
Query: 192 VYEVTCGSFHTALLTHRKR--PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ + +CG+FH+A+ + R D+ S CWTFG ENGQLG GT +++ P V LP
Sbjct: 271 IVDFSCGAFHSAIASKRDGLGDGDVRLSTCWTFGQNENGQLGIGTCENSHTPVAVDALPT 330
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGP 308
+ + +V CGLFHT+VV+ +GDVW WGME GLG CP +++GDA++P+ + G +
Sbjct: 331 HERIQTVVCGLFHTAVVTDSGDVWVWGMEGGLGQCPGIGPPGSKSGDALTPVRVFGESSA 390
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
+ +ACGAAHTV V++ G LW+WGRG++GVLG G D + P+ VLWPP E
Sbjct: 391 KCNRITGSKGIACGAAHTVTVSNGGRDLWAWGRGKNGVLGLGHHSDSWFPSPVLWPPGCE 450
Query: 369 EFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIF 428
+ + + GG L S E++ L+++L RY LH +I+
Sbjct: 451 SSRDSDADVGGT-----------------PLQS--EDVSSLKAELIECRRYTESLHAAIY 491
Query: 429 G 429
G
Sbjct: 492 G 492
>gi|168006664|ref|XP_001756029.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692959|gb|EDQ79314.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 223 bits (569), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 132/298 (44%), Positives = 168/298 (56%), Gaps = 14/298 (4%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDS----STEGGFSLVSSFTPSPVWDFHGH 127
+ V+A GMMS AID G LW+WG P P + S F L + P V GH
Sbjct: 139 LHAAQVEANGMMSSAIDQEGGLWLWGAVPHPAAPDKKSESNSFELANINYPERVSALMGH 198
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V +VACGSEH++ALV+ G D CYSWG N GQLGLGD E R P I+
Sbjct: 199 CVRRVACGSEHILALVAG---CNGVD--CYSWGGNAYGQLGLGDFEPRDIPTKIKMQQVG 253
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ + CG +H+A+ +D S CWTFG ENGQLG GT ++ P V L
Sbjct: 254 ---VIVDFACGYYHSAI-RESGGVSDGGFSTCWTFGQNENGQLGIGTCTNSNSPVTVGAL 309
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
P + +V CGLFHT+VV +GDVW WGME GLG CP +++GDA+SP+ + G
Sbjct: 310 PTRERIQTVVCGLFHTAVVMESGDVWVWGMEGGLGQCPGIGPPGSKSGDALSPVRVFGES 369
Query: 308 PHGPK-FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
F +ACGAAHT+ V+D G LW+WGRG++GVLG G D + P+ VLWP
Sbjct: 370 SAKCNLFSGSKGIACGAAHTLTVSDGGKDLWAWGRGKNGVLGLGHHSDSWFPSPVLWP 427
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 39/81 (48%), Gaps = 12/81 (14%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELN 376
VQVA G AHT+ +T G +++WGRG+ G +G G D P +V EE
Sbjct: 2 VQVAAGEAHTLALTASG-SVYTWGRGQFGRMGMGVFQDELEPTLVEIGATVEE------- 53
Query: 377 TGGLDDEIKTKDLEGAEERDE 397
D+ + T+D + ER
Sbjct: 54 ----DNGLPTRDDRDSAERSR 70
>gi|302799595|ref|XP_002981556.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
gi|300150722|gb|EFJ17371.1| hypothetical protein SELMODRAFT_179009 [Selaginella moellendorffii]
Length = 430
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 125/287 (43%), Gaps = 67/287 (23%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F P P+ G + ++ACG H +A+ + GE Y SWG N NGQLGLGD +
Sbjct: 99 FVPHPIKALQGLEIRQIACGDSHCLAVTADGEVY--------SWGRNQNGQLGLGDTDDS 150
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR-----------------KRPNDML--- 215
L P + F S V + G+ HTA +T R + ML
Sbjct: 151 LVPHKLLAFEGVS---VKMLAAGAEHTAAVTDSGKLYGWGWGRYGNLGLGDRGDRMLPAE 207
Query: 216 ------ESMC------------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
E MC +T+G + GQLGHG L+P QV L ++
Sbjct: 208 VPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF- 266
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V G HT ++ AG ++ WG K + + D SP LIS G H
Sbjct: 267 NITQVSGGWRHTVALTEAGKLYGWGWNK------FGQVGSGDVDDHTSPQLISIPGQH-- 318
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q VQV+CG HTV VTD ++SWGRG SG LG G +D AP
Sbjct: 319 --QRVVQVSCGWRHTVAVTDKN-NVYSWGRGTSGQLGHGDAVDRSAP 362
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ V+ G+ H VAL+S +VC S+G +GQLG GD E RL P+II N
Sbjct: 7 VLLVSAGASHTVALLSG-------QVVC-SFGRGEDGQLGHGDAEDRLLPRIIGALNDCE 58
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG+ HT + + +++G G+ G+LGHG + VP +K L
Sbjct: 59 ---ISLVACGADHTTAYSATRL-------TIYSWGWGDFGRLGHGNSSDLFVPHPIKAL- 107
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG H V++ G+V+SWG + N L + D++ P
Sbjct: 108 QGLEIRQIACGDSHCLAVTADGEVYSWGRNQ------NGQLGLGDTDDSLV--------P 153
Query: 309 HGPKFQDPVQV---ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
H + V V A GA HT VTD G KL+ WG GR G LG G D PA V P
Sbjct: 154 HKLLAFEGVSVKMLAAGAEHTAAVTDSG-KLYGWGWGRYGNLGLGDRGDRMLPAEV--PA 210
Query: 366 LTEE 369
+ +E
Sbjct: 211 VGDE 214
>gi|302760205|ref|XP_002963525.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
gi|300168793|gb|EFJ35396.1| hypothetical protein SELMODRAFT_438355 [Selaginella moellendorffii]
Length = 430
Score = 119 bits (297), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 125/287 (43%), Gaps = 67/287 (23%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F P P+ G + ++ACG H +A+ + GE Y SWG N NGQLGLGD +
Sbjct: 99 FVPHPIKALQGLEIRQIACGDSHCLAVTADGEVY--------SWGRNQNGQLGLGDTDDS 150
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR-----------------KRPNDML--- 215
L P + F S V + G+ HTA +T R + ML
Sbjct: 151 LVPHKLLAFEGVS---VKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDRMLPAE 207
Query: 216 ------ESMC------------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
E MC +T+G + GQLGHG L+P QV L ++
Sbjct: 208 VPAVGDEKMCMVACGWRHTIAVSQSGKLYTYGWSKYGQLGHGDYADHLLPHQVAALAEF- 266
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V G HT ++ AG ++ WG K + + D SP LIS G H
Sbjct: 267 NITQVSGGWRHTVALTEAGKLYGWGWNK------FGQVGSGDVDDHTSPQLISIPGQH-- 318
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q VQV+CG HTV VTD ++SWGRG SG LG G +D AP
Sbjct: 319 --QRVVQVSCGWRHTVAVTDKN-NVYSWGRGTSGQLGHGDAVDRSAP 362
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 117/242 (48%), Gaps = 35/242 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ V+ G+ H VAL+S +VC S+G +GQLG GD E R P+II N
Sbjct: 7 VLLVSAGASHTVALLSG-------QVVC-SFGRGEDGQLGHGDAEDRHLPRIIGALNDCE 58
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG+ HT + + +++G G+ G+LGHG + VP +K L
Sbjct: 59 ---ISLVACGADHTTAYSATRL-------TIYSWGWGDFGRLGHGNSSDLFVPHPIKAL- 107
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP-ILISGNG 307
Q + + + CG H V++ G+V+SWG + N L + D++ P L++ G
Sbjct: 108 QGLEIRQIACGDSHCLAVTADGEVYSWGRNQ------NGQLGLGDTDDSLVPHKLLAFEG 161
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
+A GA HT VTD G KL+ WG GR G LG G D PA V P +
Sbjct: 162 V------SVKMLAAGAEHTAAVTDGG-KLYGWGWGRYGNLGLGDRGDRMLPAEV--PAVG 212
Query: 368 EE 369
+E
Sbjct: 213 DE 214
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 91/224 (40%), Gaps = 36/224 (16%)
Query: 62 DDSKTNHK----APIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSL 112
DDS HK + + + AG + A+ + G L+ WG N L D
Sbjct: 148 DDSLVPHKLLAFEGVSVKMLAAGAEHTAAVTDGGKLYGWGWGRYGNLGLGDRGDR----- 202
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
P+ V + VACG H +A+ +G+ Y Y W + GQLG GD
Sbjct: 203 ---MLPAEVPAVGDEKMCMVACGWRHTIAVSQSGKLY------TYGW--SKYGQLGHGDY 251
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P + + + + +V+ G HT LT + + +G + GQ+G
Sbjct: 252 ADHLLPHQVAALAE---FNITQVSGGWRHTVALTEAGK--------LYGWGWNKFGQVGS 300
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
G P+ + Q+ +V V CG HT V+ +V+SWG
Sbjct: 301 GDVDDHTSPQLISIPGQHQRVVQVSCGWRHTVAVTDKNNVYSWG 344
>gi|301094633|ref|XP_002896421.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262109510|gb|EEY67562.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 1289
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 139/311 (44%), Gaps = 61/311 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---------------CPLPDSSTEGGFSLVSSFTP 118
I V GG L + + G ++ +G+ LPD+ + S S P
Sbjct: 479 IVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHTSTLPDNESTRVVSTSSFLAP 538
Query: 119 SPVWDF------HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
V + H T+ VACG++H +A+ AGE Y+WG+ +G+LG GD
Sbjct: 539 HLVEELALEKALHRTTIAMVACGAQHSLAITDAGE--------LYTWGSGEDGRLGHGDM 590
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R P+ + + ++S V +CG HTA+LT + +TFG G NG+LG
Sbjct: 591 RDRAVPRKVMSLLRES---VVSASCGGAHTAVLTAK--------GSVFTFGRGRNGRLGL 639
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G + P + PQ + V CG T+ + G V++WG + G G C + R
Sbjct: 640 GDNKWRDTPHPIVGFPQGTSISLVVCGWNFTAALDRQGSVFTWG-KTGEGQCGLGYVDR- 697
Query: 293 EAGDAISPILISGNGPHGPKFQD-----PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
D + P + K +D V VACG HTV++T G +L+SWG G G L
Sbjct: 698 ---DQVVPRCVD-------KLRDVAGSSVVDVACGYTHTVVLTASG-ELYSWGLGEYGQL 746
Query: 348 GTGKTIDFFAP 358
GTG D + P
Sbjct: 747 GTG---DVYQP 754
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 97/244 (39%), Gaps = 44/244 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP-----VWDFHGHT 128
I V G + A+D G+++ WG + G V P + D G +
Sbjct: 660 ISLVVCGWNFTAALDRQGSVFTWGKT----GEGQCGLGYVDRDQVVPRCVDKLRDVAGSS 715
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQD 187
VV VACG H V L ++GE YSWG GQLG GD L ++ +
Sbjct: 716 VVDVACGYTHTVVLTASGE--------LYSWGLGEYGQLGTGDVYQPLPARVQLPADALC 767
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+P + V CG+FH+ T ++ + + +GL G G G T + PE+
Sbjct: 768 APDQLARVYCGAFHSIATTEQR--------VMFAWGLNSYGACGLGHTANKDKPER---- 815
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+DC T +V + G ++ +E NASL + + P + NG
Sbjct: 816 --------IDCFSSQTELVVACGHKYTIALEV------NASLYTHSPSQTMLPTGAALNG 861
Query: 308 PHGP 311
P
Sbjct: 862 LEMP 865
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 15/143 (10%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP------N 286
G T L P+ V L +V V CG H ++S GDV+S+G + +
Sbjct: 460 GGTPLVLRPKHVS-LANGQPIVQVACGGEHLLYLTSTGDVYSYGDNEDKKVAAVTVATHT 518
Query: 287 ASLTRNEAGDAIS------PILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSW 339
++L NE+ +S P L+ + + VACGA H++ +TD G +L++W
Sbjct: 519 STLPDNESTRVVSTSSFLAPHLVEELALEKALHRTTIAMVACGAQHSLAITDAG-ELYTW 577
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL 362
G G G LG G D P V+
Sbjct: 578 GSGEDGRLGHGDMRDRAVPRKVM 600
>gi|357149503|ref|XP_003575134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 448
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 137/295 (46%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IKI + G LA+ +AG + WG N L +TE S P + F G
Sbjct: 126 IKIKQIACGDSHCLAVTDAGQVHSWGRNQNGQLGLGNTE------DSLLPQKIHAFEGVC 179
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A++ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 180 VKMIAAGAEHTAAIL--------EDGDLYGWGWGQYGNLGLGDRNDRLVPEKVSSVEGEK 231
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ D+ +T+G + GQLGHG + LVP +++ L
Sbjct: 232 ---MVLVACGWRHTVTVS---SSGDL-----YTYGWSKYGQLGHGDFEDHLVPHKLEALK 280
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT V+ G ++ WG K +G+ N D SP+ +
Sbjct: 281 DR-FISQIAGGWRHTMAVAGDGKLYGWGWNKFGQVGVADNV--------DHCSPVQVIF- 330
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q QVACG HT+ +T++ ++SWGRG SG LG G+ ID P ++
Sbjct: 331 ----PDEQKVAQVACGWRHTLALTEN-KNVFSWGRGTSGQLGHGEIIDRNTPKMI 380
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 107/235 (45%), Gaps = 30/235 (12%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TV V+ G+ H VAL+S+ VC SWG +GQLG GD E R P ++ F
Sbjct: 20 QTVALVSAGANHSVALLSS-------KAVC-SWGRGEDGQLGHGDAEDRPVPTLLSGF-- 69
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D P V CG+ HT + + +++G G+ G+LGHG + P+ ++
Sbjct: 70 DVPGIASVVICGADHTTAYSDEQM-------QLYSWGWGDFGRLGHGNSSDVFHPQPIEA 122
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q + + + CG H V+ AG V SWG + N L D++ P I
Sbjct: 123 L-QGIKIKQIACGDSHCLAVTDAGQVHSWGRNQ------NGQLGLGNTEDSLLPQKI--- 172
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H + +A GA HT + +DG L+ WG G+ G LG G D P V
Sbjct: 173 --HAFEGVCVKMIAAGAEHTAAILEDG-DLYGWGWGQYGNLGLGDRNDRLVPEKV 224
Score = 51.6 bits (122), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 60/128 (46%), Gaps = 19/128 (14%)
Query: 235 TQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
++A E+V E P Q V LVS G H+ + S+ V SWG + + L +
Sbjct: 5 AEAAAGDEEVPEAPEQTVALVS--AGANHSVALLSSKAVCSWGRGE------DGQLGHGD 56
Query: 294 AGDAISPILISGNGPHGPKFQDP---VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A D P L+SG F P V CGA HT +D+ +L+SWG G G LG G
Sbjct: 57 AEDRPVPTLLSG-------FDVPGIASVVICGADHTTAYSDEQMQLYSWGWGDFGRLGHG 109
Query: 351 KTIDFFAP 358
+ D F P
Sbjct: 110 NSSDVFHP 117
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 88/267 (32%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SL+P I F + + + AG + AI
Sbjct: 154 QNGQLGLGNTEDSLLPQKIHAF------------------EGVCVKMIAAGAEHTAAILE 195
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D + P V G +V VACG H V + S
Sbjct: 196 DGDLYGWGWGQYGNLGLGDRNDR--------LVPEKVSSVEGEKMVLVACGWRHTVTVSS 247
Query: 145 AGETYK--------------------------------------------GEDLVCYSWG 160
+G+ Y D Y WG
Sbjct: 248 SGDLYTYGWSKYGQLGHGDFEDHLVPHKLEALKDRFISQIAGGWRHTMAVAGDGKLYGWG 307
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+ D P ++ D V +V CG HT LT K +
Sbjct: 308 WNKFGQVGVADNVDHCSP--VQVIFPDEQ-KVAQVACGWRHTLALTENKN--------VF 356
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G +GQLGHG P+ + L
Sbjct: 357 SWGRGTSGQLGHGEIIDRNTPKMIDAL 383
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G ++A+ G L+ WG G V +P V V +VA
Sbjct: 284 ISQIAGGWRHTMAVAGDGKLYGWGWNKF---GQVGVADNVDHCSPVQVIFPDEQKVAQVA 340
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +AL E+ +SWG +GQLG G+ R PK+I+ + D
Sbjct: 341 CGWRHTLALT--------ENKNVFSWGRGTSGQLGHGEIIDRNTPKMIDALSLD 386
>gi|356508943|ref|XP_003523212.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 441
Score = 113 bits (283), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 138/295 (46%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ G + WG N L +TE S P + F G
Sbjct: 119 LRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGNTE------DSLVPQKIQAFKGVP 172
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH VA+ GE Y WG G LGLGDR R P+ + + + D
Sbjct: 173 IKMVAAGAEHSVAITENGE--------LYGWGWGRYGNLGLGDRNDRWNPEKVSSVDCDK 224
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + +LVP++++ L
Sbjct: 225 ---MVMVACGWRHTISVSS--------SGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALS 273
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ + V G H+ ++S G ++ WG K +G+ N D SP+ +
Sbjct: 274 DKL-ISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNL--------DHCSPVQVKF- 323
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P+ Q VQ++CG HT+ VT+ ++SWGRG +G LG G TID +P I+
Sbjct: 324 ----PQDQRVVQISCGWRHTIAVTEK-ENVFSWGRGTNGQLGHGDTIDRNSPKII 373
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 118/235 (50%), Gaps = 35/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S ++VC SWG +GQLG GD + R P + +
Sbjct: 16 VLLISAGASHTVALLSG-------NVVC-SWGRGEDGQLGHGDTDDRPLPTQLSALDAQH 67
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + CG+ HT L + + N++ +++G G+ G+LGHG + L+P+ + L
Sbjct: 68 ---IDSIACGADHT--LAYSESRNEL-----YSWGWGDFGRLGHGNSSDLLIPQPIIAL- 116
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG H V+ G+V SWG + N L D++ P I
Sbjct: 117 QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQ------NGQLGLGNTEDSLVPQKIQ---- 166
Query: 309 HGPKFQD-PVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ P++ VA GA H+V +T++G +L+ WG GR G LG G D + P V
Sbjct: 167 ---AFKGVPIKMVAAGAEHSVAITENG-ELYGWGWGRYGNLGLGDRNDRWNPEKV 217
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 26/173 (15%)
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V ++ G+ HT L + ++ ++G GE+GQLGHG T +P Q+ L
Sbjct: 13 PSRVLLISAGASHTVAL--------LSGNVVCSWGRGEDGQLGHGDTDDRPLPTQLSALD 64
Query: 249 QYVYLVSVDCGLFHTSVVSSAGD---VWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
++ S+ CG HT S + + W WG LG ++ L + A+ + I
Sbjct: 65 AQ-HIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIK- 122
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q+ACG +H + VT +G ++ SWGR ++G LG G T D P
Sbjct: 123 ------------QIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGNTEDSLVP 162
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 102/267 (38%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SLVP I+ F + PIK+ V AG S+AI
Sbjct: 147 QNGQLGLGNTEDSLVPQKIQAFKGV----------------PIKM--VAAGAEHSVAITE 188
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D + + P V +V VACG H +++ S
Sbjct: 189 NGELYGWGWGRYGNLGLGDRNDR--------WNPEKVSSVDCDKMVMVACGWRHTISVSS 240
Query: 145 AGETYK--------------------------GEDLVC------------------YSWG 160
+G Y + L+ + WG
Sbjct: 241 SGGIYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLFGWG 300
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD P ++ F QD V +++CG HT +T ++ +
Sbjct: 301 WNKFGQVGVGDNLDHCSPVQVK-FPQDQ--RVVQISCGWRHTIAVTEKEN--------VF 349
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G NGQLGHG T P+ ++ L
Sbjct: 350 SWGRGTNGQLGHGDTIDRNSPKIIEAL 376
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G S+A+ + G L+ WG S P V VV+++
Sbjct: 277 ISQVSGGWRHSMALTSTGLLFGWGWNKFGQVGVGDNLDHCS---PVQVKFPQDQRVVQIS 333
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E +SWG NGQLG GD R PKIIE + D
Sbjct: 334 CGWRHTIAVT--------EKENVFSWGRGTNGQLGHGDTIDRNSPKIIEALSVD 379
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 13/115 (11%)
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
P V L+S G HT + S V SWG + + L + D P +S
Sbjct: 13 PSRVLLIS--AGASHTVALLSGNVVCSWGRGE------DGQLGHGDTDDRPLPTQLSA-- 62
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q +ACGA HT+ ++ +L+SWG G G LG G + D P ++
Sbjct: 63 ---LDAQHIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII 114
>gi|224093583|ref|XP_002309939.1| predicted protein [Populus trichocarpa]
gi|222852842|gb|EEE90389.1| predicted protein [Populus trichocarpa]
Length = 444
Score = 112 bits (280), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 137/295 (46%), Gaps = 43/295 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+KI + G LA+ G + WG N L +TE S P + F G +
Sbjct: 123 LKIRQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE------DSLVPQKIQAFQGVS 176
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ GE Y WG G LGLGDR RL P+ + N D
Sbjct: 177 IKMVAAGAEHTAAVTEDGE--------LYGWGWGRYGNLGLGDRNDRLVPEKVSLVNGDK 228
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + L P +V+ L
Sbjct: 229 ---MIMVACGWRHTISVSS--------SGGLYTYGWSKYGQLGHGDFEDHLTPHKVEAL- 276
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ Y+ + G HT ++S G+++ WG K +G+ N D SP+ +
Sbjct: 277 RDSYISMISGGWRHTMALTSDGNLYGWGWNKFGQVGVGDNI--------DHCSPVQV--K 326
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
PH + VQ++CG HT+ +T+ ++SWGRG +G LG G+++D P I+
Sbjct: 327 FPH-EQAHSLVQISCGWRHTLAITER-QNVFSWGRGTNGQLGHGESMDRNLPKII 379
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 35/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S ++VC SWG +GQLG GD E R P + T +
Sbjct: 20 VILISAGASHSVALLSG-------NIVC-SWGRGEDGQLGHGDAEDRPTPTQLSTLD--- 68
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +TCG+ HT + + +E W G G+ G+LGHG + P+ +K L
Sbjct: 69 GLDIISITCGADHTTSYSESR-----MEVYSW--GWGDFGRLGHGNSSDLFTPQPIKAL- 120
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG H V+ G+V SWG + N L D++ P I
Sbjct: 121 HSLKIRQIACGDSHCLAVTMDGEVQSWGRNQ------NGQLGLGTTEDSLVPQKIQ---- 170
Query: 309 HGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
FQ VA GA HT VT+DG +L+ WG GR G LG G D P V
Sbjct: 171 ---AFQGVSIKMVAAGAEHTAAVTEDG-ELYGWGWGRYGNLGLGDRNDRLVPEKV 221
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 132/295 (44%), Gaps = 39/295 (13%)
Query: 70 APIK-ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
PI+ + + AG S+A+ + + WG + G TP+ + G
Sbjct: 15 GPIRQVILISAGASHSVALLSGNIVCSWGRG---EDGQLGHGDAEDRPTPTQLSTLDGLD 71
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
++ + CG++H +Y + YSWG + G+LG G+ P+ I+ +
Sbjct: 72 IISITCGADHTT-------SYSESRMEVYSWGWGDFGRLGHGNSSDLFTPQPIKALHS-- 122
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ ++ CG H +T ++ ++G +NGQLG GTT+ +LVP++++
Sbjct: 123 -LKIRQIACGDSHCLAVT--------MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF- 172
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V + V G HT+ V+ G++ W WG LGL + D + P +S
Sbjct: 173 QGVSIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL--------GDRNDRLVPEKVS-- 222
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+G K + VACG HT+ V+ G L+++G + G LG G D P V
Sbjct: 223 LVNGDKM---IMVACGWRHTISVSSSG-GLYTYGWSKYGQLGHGDFEDHLTPHKV 273
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 101/239 (42%), Gaps = 41/239 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ ++G L+ +G G TP V + +
Sbjct: 228 KMIMVACGWRHTISVSSSGGLYTYG---WSKYGQLGHGDFEDHLTPHKVEALRDSYISMI 284
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G Y WG N GQ+G+GD P ++ F + ++
Sbjct: 285 SGGWRHTMALTSDGN--------LYGWGWNKFGQVGVGDNIDHCSPVQVK-FPHEQAHSL 335
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+++CG HT +T R+ +++G G NGQLGHG + + LP+ +
Sbjct: 336 VQISCGWRHTLAITERQN--------VFSWGRGTNGQLGHGESMD-------RNLPKIIE 380
Query: 253 LVSVDCGLFH----TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
++S D H ++V S G W + ++ +E+G A+S + GNG
Sbjct: 381 VLSADGSGGHQIEASTVDPSLGKSW-------VSPSDRYAIVPDESGQAVS---VGGNG 429
>gi|449676845|ref|XP_002166895.2| PREDICTED: uncharacterized protein LOC100213911, partial [Hydra
magnipapillata]
Length = 725
Score = 112 bits (279), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 124/247 (50%), Gaps = 42/247 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV++ACG EH + +G Y +G+N+ GQLGLG +S +P ++
Sbjct: 40 VVEMACGDEHSAVVTESGR--------LYVFGSNDWGQLGLGHTKSLNKPSFVKPL---K 88
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V +V CG HT + + + ++FG E+GQLGH ++ L+P++++ +P
Sbjct: 89 PEKVRKVACGRNHTIVYSESGK--------LFSFGCNEDGQLGHVDKENELLPKEIESIP 140
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q + + + CG +H+ ++S GDV+ WG E LGL G+ + L
Sbjct: 141 Q-MEIKQIACGTYHSIILSEDGDVYVWGNNNEGQLGL-----------GEEVENSL---- 184
Query: 307 GPHGPKF-QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG--TGKTIDFFAPAIVLW 363
P KF ++ V V+CG HT LVT DG+ L+++G G LG + + + P V
Sbjct: 185 -PKKLKFKKEVVSVSCGYYHTALVTRDGF-LYTFGENELGKLGLSSSQLSNTTVPQSVAM 242
Query: 364 PPLTEEF 370
P +E+
Sbjct: 243 PADNDEY 249
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 133/302 (44%), Gaps = 37/302 (12%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L +G SL S P K+ V G ++ +G L+ +G + G
Sbjct: 70 LGLGHTKSLNKPSFVKPLKPEKVRKVACGRNHTIVYSESGKLFSFG---CNEDGQLGHVD 126
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+ P + + ++ACG+ H + L ED Y WG NN GQLGLG+
Sbjct: 127 KENELLPKEIESIPQMEIKQIACGTYHSIIL--------SEDGDVYVWGNNNEGQLGLGE 178
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK ++ F ++ V V+CG +HTAL+T + +TFG E G+LG
Sbjct: 179 EVENSLPKKLK-FKKE----VVSVSCGYYHTALVTR--------DGFLYTFGENELGKLG 225
Query: 232 HGTTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
++Q + VP+ V +SV CG HT ++ G ++WG L L
Sbjct: 226 LSSSQLSNTTVPQSVAMPADNDEYISVSCGARHTVAITKQGHCYAWGDGSQGQLGHGTKL 285
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E + +SG Q + V+CG +HT +VT+ G K++++G GR G LG
Sbjct: 286 L--EVNEPKQIKKLSG--------QKCISVSCGESHTAVVTESG-KVFTFGDGRHGKLGQ 334
Query: 350 GK 351
G+
Sbjct: 335 GE 336
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 91/239 (38%), Gaps = 50/239 (20%)
Query: 7 YYHYYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKT 66
YYH L F+ L G+LG S S L + Q + + A +
Sbjct: 201 YYHTALVTRDGFLYTFGENEL-----GKLGLSSS-QLSNTTVPQSVAMPADND------- 247
Query: 67 NHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPSPVW 122
+ SV G ++AI G + WG+ ++G G L+ P +
Sbjct: 248 ------EYISVSCGARHTVAITKQGHCYAWGD------GSQGQLGHGTKLLEVNEPKQIK 295
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE--SRLRPKI 180
G + V+CG H + +G+ + ++G +G+LG G+ + P
Sbjct: 296 KLSGQKCISVSCGESHTAVVTESGKVF--------TFGDGRHGKLGQGEDSFSNSFDPVY 347
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ FN + V V+CG HT +L K +D ++ GEN T+Q +L
Sbjct: 348 LSRFNY---FNVVYVSCGGCHTLVLAVHKNKDDFVD--------GENSLRASMTSQKSL 395
>gi|449457319|ref|XP_004146396.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
sativus]
Length = 438
Score = 111 bits (278), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 137/296 (46%), Gaps = 47/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+KI + G LA+ G + WG N L +TE S P + F G +
Sbjct: 113 LKIRQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTE------DSLVPQKIQAFEGIS 166
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ GE + WG G LGLGDR RL P+ + + + D
Sbjct: 167 IKMVAAGAEHTAAVTEDGE--------LFGWGWGRYGNLGLGDRNDRLVPQKVSSVDGDK 218
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +++ L
Sbjct: 219 ---MVMVACGWRHTISVSSL--------GGLYTYGWSKYGQLGHGDFEDRLVPHRLEAL- 266
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI---SPILISG 305
+ + + G HT +++ G ++ WG K + AGD I SPI I
Sbjct: 267 RGDNISQISGGWRHTMALTTDGKLYGWGWNK---------FGQVGAGDNIDHCSPIQIKF 317
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P+ Q +Q++CG HT+ VTD ++SWGRG +G LG G+++D P I+
Sbjct: 318 -----PQDQKVIQISCGWRHTLAVTDK-QNVFSWGRGTNGQLGHGESVDRNTPMIL 367
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/233 (32%), Positives = 110/233 (47%), Gaps = 31/233 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S ++VC SWG +GQLG GD E RL P + +
Sbjct: 10 VLFISAGASHSVALLSG-------NIVC-SWGRGEDGQLGHGDAEDRLSPTQLSALDGHE 61
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ VTCG+ HT + + + +++G G+ G+LGHG + L P+ +K L
Sbjct: 62 ---IVSVTCGADHTTAYS-------VARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKAL- 110
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG H V+ G+V SWG + N L D++ P I
Sbjct: 111 HGLKIRQIACGDSHCLAVTMEGEVQSWGRNQ------NGQLGLGTTEDSLVPQKIQAFEG 164
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K VA GA HT VT+DG +L+ WG GR G LG G D P V
Sbjct: 165 ISIKM-----VAAGAEHTAAVTEDG-ELFGWGWGRYGNLGLGDRNDRLVPQKV 211
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 129/288 (44%), Gaps = 38/288 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ + AG S+A+ + + WG + G +P+ + GH +V V
Sbjct: 9 RVLFISAGASHSVALLSGNIVCSWGRG---EDGQLGHGDAEDRLSPTQLSALDGHEIVSV 65
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CG++H A Y YSWG + G+LG G+ L PK I+ + +
Sbjct: 66 TCGADHTTA-------YSVARTEVYSWGWGDFGRLGHGNSSDLLTPKPIKALH---GLKI 115
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG H +T +E ++G +NGQLG GTT+ +LVP++++ + +
Sbjct: 116 RQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF-EGIS 166
Query: 253 LVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ V G HT+ V+ G++ W WG LGL + D + P +S G
Sbjct: 167 IKMVAAGAEHTAAVTEDGELFGWGWGRYGNLGL--------GDRNDRLVPQKVS--SVDG 216
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
K V VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 217 DKM---VMVACGWRHTISVSSLG-GLYTYGWSKYGQLGHGDFEDRLVP 260
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
I + G ++A+ G L+ WG G + +P + V+++
Sbjct: 270 NISQISGGWRHTMALTTDGKLYGWGWNKF---GQVGAGDNIDHCSPIQIKFPQDQKVIQI 326
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+CG H +A+ + +SWG NGQLG G+ R P I+E + D
Sbjct: 327 SCGWRHTLAVT--------DKQNVFSWGRGTNGQLGHGESVDRNTPMILEALSVD 373
>gi|115446671|ref|NP_001047115.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|50725773|dbj|BAD33304.1| putative UVB-resistance protein (UVR8) [Oryza sativa Japonica
Group]
gi|113536646|dbj|BAF09029.1| Os02g0554100 [Oryza sativa Japonica Group]
gi|215697683|dbj|BAG91677.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 41/293 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ AG + WG N L +TE S P + F G
Sbjct: 134 VRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTE------DSLLPQKIQAFEGVR 187
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR+ RL P+ + + N
Sbjct: 188 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 239
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +++ L
Sbjct: 240 ---MVLVACGWRHTITVSS--------SGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALK 288
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + G HT +++ G ++ WG K + NE D SP+ ++
Sbjct: 289 DTT-ISQISGGWRHTMALAADGKLYGWGWNK----FGQVGVGDNE--DHCSPVQVNF--- 338
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQVACG HT+ +T+ ++SWGRG SG LG G+ +D P ++
Sbjct: 339 --PNEQKVVQVACGWRHTLALTE-AKNVFSWGRGTSGQLGHGEIVDRNIPKMI 388
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+VV ++ G+ H VAL+S G +VC SWG +GQLG GD E R P ++ D
Sbjct: 26 SVVLISAGASHSVALLSGG-------VVC-SWGRGEDGQLGHGDAEDRPVPTVLTAAFDD 77
Query: 188 SPWAVYEVT-CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+P V V CG+ HT + E +++G G+ G+LGHG + P+ ++
Sbjct: 78 APGGVASVVICGADHTTAYSDE-------ELQLYSWGWGDFGRLGHGNSSDVFNPQPIQA 130
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q V + + CG H V+ AG V SWG + N L D++ P I
Sbjct: 131 L-QGVRITQIACGDSHCLAVTVAGHVHSWGRNQ------NGQLGLGNTEDSLLPQKIQAF 183
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + + +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 184 --EGVRVK---MIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRDDRLIPEKV 232
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 92/267 (34%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SL+P I+ F +++ + AG + A+
Sbjct: 162 QNGQLGLGNTEDSLLPQKIQAF------------------EGVRVKMIAAGAEHTAAVTE 203
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D P V +G +V VACG H + + S
Sbjct: 204 DGDLYGWGWGRYGNLGLGDRDDR--------LIPEKVSSVNGQKMVLVACGWRHTITVSS 255
Query: 145 AGETYK--------------------------------------------GEDLVCYSWG 160
+G Y D Y WG
Sbjct: 256 SGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWG 315
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD E P + N+ V +V CG HT LT K +
Sbjct: 316 WNKFGQVGVGDNEDHCSPVQVNFPNEQK---VVQVACGWRHTLALTEAKN--------VF 364
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G +GQLGHG +P+ + L
Sbjct: 365 SWGRGTSGQLGHGEIVDRNIPKMIDAL 391
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
E V E P+ +V + G H+ + S G V SWG + + L +A D P
Sbjct: 17 EAVPEAPER-SVVLISAGASHSVALLSGGVVCSWGRGE------DGQLGHGDAEDRPVPT 69
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+++ P V V CGA HT +D+ +L+SWG G G LG G + D F P
Sbjct: 70 VLTAAFDDAPGGVASV-VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNP 125
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV+VACG H +AL A + SWG +GQLG G+ R PK+I+ + D
Sbjct: 344 VVQVACGWRHTLALTEAKNVF--------SWGRGTSGQLGHGEIVDRNIPKMIDALSSD 394
>gi|218190962|gb|EEC73389.1| hypothetical protein OsI_07634 [Oryza sativa Indica Group]
Length = 448
Score = 111 bits (278), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 134/293 (45%), Gaps = 41/293 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ AG + WG N L +TE S P + F G
Sbjct: 129 VRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTE------DSLLPQKIQAFEGVR 182
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR+ RL P+ + + N
Sbjct: 183 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +++ L
Sbjct: 235 ---MVLVACGWRHTITVSS--------SGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALK 283
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + G HT +++ G ++ WG K + NE D SP+ ++
Sbjct: 284 DTT-ISQISGGWRHTMALAADGKLYGWGWNK----FGQVGVGDNE--DHCSPVQVNF--- 333
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQVACG HT+ +T+ ++SWGRG SG LG G+ +D P ++
Sbjct: 334 --PNEQKVVQVACGWRHTLALTE-AKNVFSWGRGTSGQLGHGEIVDRNIPKMI 383
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+VV ++ G+ H VAL+S G +VC SWG +GQLG GD E R P ++ D
Sbjct: 21 SVVLISAGASHSVALLSGG-------VVC-SWGRGEDGQLGHGDAEDRPVPTVLTAAFDD 72
Query: 188 SPWAVYEVT-CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+P V V CG+ HT + E +++G G+ G+LGHG + P+ ++
Sbjct: 73 APGGVASVVICGADHTTAYSDE-------ELQLYSWGWGDFGRLGHGNSSDVFNPQPIQA 125
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q V + + CG H V+ AG V SWG + N L D++ P I
Sbjct: 126 L-QGVRITQIACGDSHCLAVTVAGHVHSWGRNQ------NGQLGLGNTEDSLLPQKIQAF 178
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + + +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 179 --EGVRVK---MIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRDDRLIPEKV 227
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 92/267 (34%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SL+P I+ F +++ + AG + A+
Sbjct: 157 QNGQLGLGNTEDSLLPQKIQAF------------------EGVRVKMIAAGAEHTAAVTE 198
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D P V +G +V VACG H + + S
Sbjct: 199 DGDLYGWGWGRYGNLGLGDRDDR--------LIPEKVSSVNGQKMVLVACGWRHTITVSS 250
Query: 145 AGETYK--------------------------------------------GEDLVCYSWG 160
+G Y D Y WG
Sbjct: 251 SGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALKDTTISQISGGWRHTMALAADGKLYGWG 310
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD E P + N+ V +V CG HT LT K +
Sbjct: 311 WNKFGQVGVGDNEDHCSPVQVNFPNEQK---VVQVACGWRHTLALTEAKN--------VF 359
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G +GQLGHG +P+ + L
Sbjct: 360 SWGRGTSGQLGHGEIVDRNIPKMIDAL 386
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 54/117 (46%), Gaps = 8/117 (6%)
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
E V E P+ +V + G H+ + S G V SWG + + L +A D P
Sbjct: 12 EAVPEAPER-SVVLISAGASHSVALLSGGVVCSWGRGE------DGQLGHGDAEDRPVPT 64
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+++ P V V CGA HT +D+ +L+SWG G G LG G + D F P
Sbjct: 65 VLTAAFDDAPGGVASV-VICGADHTTAYSDEELQLYSWGWGDFGRLGHGNSSDVFNP 120
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV+VACG H +AL A + SWG +GQLG G+ R PK+I+ + D
Sbjct: 339 VVQVACGWRHTLALTEAKNVF--------SWGRGTSGQLGHGEIVDRNIPKMIDALSSD 389
>gi|255638076|gb|ACU19352.1| unknown [Glycine max]
Length = 440
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ G + WG N L ++E S P + F G
Sbjct: 118 LRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSE------DSLVPQKIQTFQGVP 171
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH VA+ GE Y WG G LGLGDR R P+ + + + D
Sbjct: 172 IKMVAAGAEHSVAITENGE--------LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDK 223
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + +LVP++++ L
Sbjct: 224 ---MVMVACGWRHTISVSSL--------GGLYTYGWSKYGQLGHGNFEDSLVPQKLQALS 272
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ + V G H+ ++S G ++ WG K +G+ N D SP+ +
Sbjct: 273 DKL-ISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNV--------DRCSPVQVKF- 322
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQ++CG HT+ VT+ ++SWGRG +G LG G T+D +P I+
Sbjct: 323 ----PHDQKVVQISCGWRHTIAVTEK-ENVFSWGRGTNGQLGHGDTVDRNSPKII 372
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 35/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S ++VC SWG +GQLG GD + RL P + +
Sbjct: 15 VLLISAGASHTVALLSG-------NVVC-SWGRGEDGQLGHGDTDDRLLPTHLSALDAQQ 66
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + CG+ HT L + + N++ +++G G+ G+LGHG + L+P+ + L
Sbjct: 67 ---IDSIACGADHT--LAYSESRNEL-----YSWGWGDFGRLGHGNSSDLLIPQPIIAL- 115
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG H V+ G+V SWG + N L + D++ P I
Sbjct: 116 QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQ------NGQLGLGTSEDSLVPQKIQ---- 165
Query: 309 HGPKFQD-PVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
FQ P++ VA GA H+V +T++G +L+ WG GR G LG G D + P V
Sbjct: 166 ---TFQGVPIKMVAAGAEHSVAITENG-ELYGWGWGRYGNLGLGDRNDRWIPEKV 216
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V ++ G+ HT L + ++ ++G GE+GQLGHG T L+P + L
Sbjct: 12 PSRVLLISAGASHTVAL--------LSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD 63
Query: 249 QYVYLVSVDCGLFHTSVVSSAGD---VWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ S+ CG HT S + + W WG LG ++ L + A+ + I
Sbjct: 64 AQ-QIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIK- 121
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q+ACG +H + VT +G ++ SWGR ++G LG G + D P
Sbjct: 122 ------------QIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGTSEDSLVP 161
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 101/267 (37%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG S +SLVP I+ F + PIK+ V AG S+AI
Sbjct: 146 QNGQLGLGTSEDSLVPQKIQTFQGV----------------PIKM--VAAGAEHSVAITE 187
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D + + P V +V VACG H +++ S
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDR--------WIPEKVSSVDCDKMVMVACGWRHTISVSS 239
Query: 145 AGETYK--------------------------GEDLVC------------------YSWG 160
G Y + L+ Y WG
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWG 299
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD R P ++ F D V +++CG HT +T ++ +
Sbjct: 300 WNKFGQVGVGDNVDRCSPVQVK-FPHDQK--VVQISCGWRHTIAVTEKEN--------VF 348
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G NGQLGHG T P+ ++ L
Sbjct: 349 SWGRGTNGQLGHGDTVDRNSPKIIEAL 375
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G S+A+ + G L+ WG G V +P V H VV+++
Sbjct: 276 ISQVSGGWRHSMALTSTGLLYGWGWNKF---GQVGVGDNVDRCSPVQVKFPHDQKVVQIS 332
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E +SWG NGQLG GD R PKIIE + D
Sbjct: 333 CGWRHTIAVT--------EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVD 378
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
P V L+S G HT + S V SWG + + L + D + P +S
Sbjct: 12 PSRVLLIS--AGASHTVALLSGNVVCSWGRGE------DGQLGHGDTDDRLLPTHLSA-- 61
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q +ACGA HT+ ++ +L+SWG G G LG G + D P ++
Sbjct: 62 ---LDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII 113
>gi|356516391|ref|XP_003526878.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Glycine
max]
Length = 440
Score = 111 bits (277), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 137/295 (46%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ G + WG N L ++E S P + F G
Sbjct: 118 LRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTSE------DSLVPQKIQTFQGVP 171
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH VA+ GE Y WG G LGLGDR R P+ + + + D
Sbjct: 172 IKMVAAGAEHSVAITENGE--------LYGWGWGRYGNLGLGDRNDRWIPEKVSSVDCDK 223
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + +LVP++++ L
Sbjct: 224 ---MVMVACGWRHTISVSSL--------GGLYTYGWSKYGQLGHGNFEDSLVPQKLQALS 272
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ + V G H+ ++S G ++ WG K +G+ N D SP+ +
Sbjct: 273 DKL-ISQVSGGWRHSMALTSTGLLYGWGWNKFGQVGVGDNV--------DRCSPVQVKF- 322
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQ++CG HT+ VT+ ++SWGRG +G LG G T+D +P I+
Sbjct: 323 ----PHDQKVVQISCGWRHTIAVTEK-ENVFSWGRGTNGQLGHGDTVDRNSPKII 372
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 120/235 (51%), Gaps = 35/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S ++VC SWG +GQLG GD + RL P + +
Sbjct: 15 VLLISAGASHTVALLSG-------NVVC-SWGRGEDGQLGHGDTDDRLLPTHLSALDAQQ 66
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + CG+ HT L + + N++ +++G G+ G+LGHG + L+P+ + L
Sbjct: 67 ---IDSIACGADHT--LAYSESRNEL-----YSWGWGDFGRLGHGNSSDLLIPQPIIAL- 115
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG H V+ G+V SWG + N L + D++ P I
Sbjct: 116 QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQ------NGQLGLGTSEDSLVPQKIQ---- 165
Query: 309 HGPKFQD-PVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
FQ P++ VA GA H+V +T++G +L+ WG GR G LG G D + P V
Sbjct: 166 ---TFQGVPIKMVAAGAEHSVAITENG-ELYGWGWGRYGNLGLGDRNDRWIPEKV 216
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V ++ G+ HT L + ++ ++G GE+GQLGHG T L+P + L
Sbjct: 12 PSRVLLISAGASHTVAL--------LSGNVVCSWGRGEDGQLGHGDTDDRLLPTHLSALD 63
Query: 249 QYVYLVSVDCGLFHTSVVSSAGD---VWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ S+ CG HT S + + W WG LG ++ L + A+ + I
Sbjct: 64 AQ-QIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPIIALQGLRIK- 121
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q+ACG +H + VT +G ++ SWGR ++G LG G + D P
Sbjct: 122 ------------QIACGDSHCLAVTMEG-EVQSWGRNQNGQLGLGTSEDSLVP 161
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 101/267 (37%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG S +SLVP I+ F + PIK+ V AG S+AI
Sbjct: 146 QNGQLGLGTSEDSLVPQKIQTFQGV----------------PIKM--VAAGAEHSVAITE 187
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D + + P V +V VACG H +++ S
Sbjct: 188 NGELYGWGWGRYGNLGLGDRNDR--------WIPEKVSSVDCDKMVMVACGWRHTISVSS 239
Query: 145 AGETYK--------------------------GEDLVC------------------YSWG 160
G Y + L+ Y WG
Sbjct: 240 LGGLYTYGWSKYGQLGHGNFEDSLVPQKLQALSDKLISQVSGGWRHSMALTSTGLLYGWG 299
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD R P ++ F D V +++CG HT +T ++ +
Sbjct: 300 WNKFGQVGVGDNVDRCSPVQVK-FPHDQK--VVQISCGWRHTIAVTEKEN--------VF 348
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G NGQLGHG T P+ ++ L
Sbjct: 349 SWGRGTNGQLGHGDTVDRNSPKIIEAL 375
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 50/114 (43%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G S+A+ + G L+ WG G V +P V H VV+++
Sbjct: 276 ISQVSGGWRHSMALTSTGLLYGWGWNKF---GQVGVGDNVDRCSPVQVKFPHDQKVVQIS 332
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E +SWG NGQLG GD R PKIIE + D
Sbjct: 333 CGWRHTIAVT--------EKENVFSWGRGTNGQLGHGDTVDRNSPKIIEALSVD 378
Score = 43.1 bits (100), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 13/115 (11%)
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
P V L+S G HT + S V SWG + + L + D + P +S
Sbjct: 12 PSRVLLIS--AGASHTVALLSGNVVCSWGRGE------DGQLGHGDTDDRLLPTHLSA-- 61
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q +ACGA HT+ ++ +L+SWG G G LG G + D P ++
Sbjct: 62 ---LDAQQIDSIACGADHTLAYSESRNELYSWGWGDFGRLGHGNSSDLLIPQPII 113
>gi|242073146|ref|XP_002446509.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
gi|241937692|gb|EES10837.1| hypothetical protein SORBIDRAFT_06g017130 [Sorghum bicolor]
Length = 443
Score = 110 bits (276), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 133/293 (45%), Gaps = 41/293 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+KI + G LA+ AG + WG N L +TE S P + F G
Sbjct: 119 LKIKQIACGDSHCLAVTMAGQVQSWGRNQNGQLGLGTTE------DSLLPQKIQAFEGVC 172
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 173 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEK 224
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +++ L
Sbjct: 225 ---MVLVACGWRHTITVSDSGN--------LYTYGWSKYGQLGHGDFEDHLVPHKLEALK 273
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + G HT ++S G ++ WG K + N+ D SP+ +
Sbjct: 274 DST-ISQISGGWRHTMALTSEGKLYGWGWNK----FGQVGVGNND--DHCSPVQV----- 321
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H P+ Q QVACG HT+ +++ ++SWGRG SG LG G+ +D P ++
Sbjct: 322 HFPEDQKISQVACGWRHTLALSEK-KNVFSWGRGTSGQLGNGEIVDRNTPVLI 373
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 83/237 (35%), Positives = 113/237 (47%), Gaps = 35/237 (14%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TVV V+ G+ H VAL++ +++C SWG +GQLG GD E RL P ++ F
Sbjct: 14 QTVVLVSAGASHSVALLTG-------NVLC-SWGRGEDGQLGHGDAEDRLVPTVLSGF-- 63
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D+P + V CG+ HT + D L+ W G G+ G+LGHG + P+ VK
Sbjct: 64 DAP-GITSVICGADHTTAYSE-----DELQVYSW--GWGDFGRLGHGNSSDVFTPQPVKA 115
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q + + + CG H V+ AG V SWG + N L D++ P I
Sbjct: 116 L-QGLKIKQIACGDSHCLAVTMAGQVQSWGRNQ------NGQLGLGTTEDSLLPQKIQ-- 166
Query: 307 GPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 167 -----AFEGVCVKMIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRLLPEKV 217
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 54/116 (46%), Gaps = 17/116 (14%)
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
PQ V LVS G H+ + + + SWG + + L +A D + P ++SG
Sbjct: 13 PQTVVLVS--AGASHSVALLTGNVLCSWGRGE------DGQLGHGDAEDRLVPTVLSG-- 62
Query: 308 PHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F P V CGA HT ++D +++SWG G G LG G + D F P V
Sbjct: 63 -----FDAPGITSVICGADHTTAYSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPV 113
>gi|255563857|ref|XP_002522929.1| uvb-resistance protein uvr8, putative [Ricinus communis]
gi|223537856|gb|EEF39472.1| uvb-resistance protein uvr8, putative [Ricinus communis]
Length = 437
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 119/251 (47%), Gaps = 36/251 (14%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
FTP P+ HG + ++ACG H +A+ G+ SWG N NGQLGLG E
Sbjct: 108 FTPQPIRQLHGLKIKQIACGDSHCLAVTMEGQVQ--------SWGRNQNGQLGLGTTEDS 159
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P+ I+ F Q P + V G+ HTA +T + + +G G G LG G
Sbjct: 160 LVPQKIQAF-QGVP--IKMVAAGAEHTAAVTE--------DGELYGWGWGRYGNLGLGDR 208
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNE 293
+ LVPE+V LP +V V CG HT VSS+G ++++G K LG A
Sbjct: 209 KDRLVPEKVS-LPHGEKMVMVACGWRHTISVSSSGGLYTYGWSKYGQLGHGDYADHLIPH 267
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+A+ IS Q++ G HT+ VT DG KL+ WG + G +G G +
Sbjct: 268 QLEALQGSFIS-------------QISGGWRHTMAVTSDG-KLYGWGWNKFGQVGVGDNV 313
Query: 354 DFFAPAIVLWP 364
D +P V P
Sbjct: 314 DRSSPVQVKLP 324
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 132/295 (44%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+KI + G LA+ G + WG N L +TE S P + F G
Sbjct: 119 LKIKQIACGDSHCLAVTMEGQVQSWGRNQNGQLGLGTTE------DSLVPQKIQAFQGVP 172
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ GE Y WG G LGLGDR+ RL P+ + + +
Sbjct: 173 IKMVAAGAEHTAAVTEDGE--------LYGWGWGRYGNLGLGDRKDRLVPEKVSLPHGEK 224
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG L+P Q++ L
Sbjct: 225 ---MVMVACGWRHTISVSS--------SGGLYTYGWSKYGQLGHGDYADHLIPHQLEAL- 272
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
Q ++ + G HT V+S G ++ WG K +G+ N D SP+ +
Sbjct: 273 QGSFISQISGGWRHTMAVTSDGKLYGWGWNKFGQVGVGDNV--------DRSSPVQVKL- 323
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q + ++CG HT+ VT+ ++SWGRG +G LG G+ D P I+
Sbjct: 324 ----PLEQKVILISCGWRHTLAVTER-QNVFSWGRGTNGQLGNGECTDRNVPVII 373
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/238 (32%), Positives = 116/238 (48%), Gaps = 35/238 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S ++VC +WG +GQLG GD + RL P I+ T
Sbjct: 16 VLLISAGASHSVALLSG-------NVVC-TWGRGEDGQLGHGDAQDRLSPTILSTLE--- 64
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG+ HT + + + D+ +++G G+ G+LGHG + P+ +++L
Sbjct: 65 GLEIISVICGADHT--IAYSESHTDV-----YSWGWGDFGRLGHGNSSDLFTPQPIRQL- 116
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG H V+ G V SWG + N L D++ P I
Sbjct: 117 HGLKIKQIACGDSHCLAVTMEGQVQSWGRNQ------NGQLGLGTTEDSLVPQKIQ---- 166
Query: 309 HGPKFQD-PVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
FQ P++ VA GA HT VT+DG +L+ WG GR G LG G D P V P
Sbjct: 167 ---AFQGVPIKMVAAGAEHTAAVTEDG-ELYGWGWGRYGNLGLGDRKDRLVPEKVSLP 220
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/302 (27%), Positives = 136/302 (45%), Gaps = 39/302 (12%)
Query: 60 LEDDSKTNHKAPIK-ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP 118
+ ++ + AP++ + + AG S+A+ + + WG + G +P
Sbjct: 1 MAEEGASEVTAPVRRVLLISAGASHSVALLSGNVVCTWGR---GEDGQLGHGDAQDRLSP 57
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+ + G ++ V CG++H +A Y YSWG + G+LG G+ P
Sbjct: 58 TILSTLEGLEIISVICGADHTIA-------YSESHTDVYSWGWGDFGRLGHGNSSDLFTP 110
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ I + + ++ CG H +T +E ++G +NGQLG GTT+ +
Sbjct: 111 QPIRQLH---GLKIKQIACGDSHCLAVT--------MEGQVQSWGRNQNGQLGLGTTEDS 159
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGD 296
LVP++++ Q V + V G HT+ V+ G++ W WG LGL + D
Sbjct: 160 LVPQKIQAF-QGVPIKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL--------GDRKD 210
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ P +S PHG K V VACG HT+ V+ G L+++G + G LG G D
Sbjct: 211 RLVPEKVS--LPHGEKM---VMVACGWRHTISVSSSG-GLYTYGWSKYGQLGHGDYADHL 264
Query: 357 AP 358
P
Sbjct: 265 IP 266
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 116/317 (36%), Gaps = 95/317 (29%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SLVP I+ F + PIK+ V AG + A+
Sbjct: 147 QNGQLGLGTTEDSLVPQKIQAFQGV----------------PIKM--VAAGAEHTAAVTE 188
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D P V HG +V VACG H +++ S
Sbjct: 189 DGELYGWGWGRYGNLGLGDRKDR--------LVPEKVSLPHGEKMVMVACGWRHTISVSS 240
Query: 145 AGETYK--------------------------------------------GEDLVCYSWG 160
+G Y D Y WG
Sbjct: 241 SGGLYTYGWSKYGQLGHGDYADHLIPHQLEALQGSFISQISGGWRHTMAVTSDGKLYGWG 300
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD R P ++ + V ++CG HT +T R+ +
Sbjct: 301 WNKFGQVGVGDNVDRSSPVQVKLPLEQK---VILISCGWRHTLAVTERQN--------VF 349
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG--LFHTSVVSSAGDVWSWGME 278
++G G NGQLG+G VP +K L V CG + + V SS+G W E
Sbjct: 350 SWGRGTNGQLGNGECTDRNVPVIIKALS-----VDGSCGQHIESSMVDSSSGKTWVLPSE 404
Query: 279 KGLGLCPNASLTRNEAG 295
+ + P+ S + +G
Sbjct: 405 R-YAVVPDESAQTDGSG 420
>gi|379318630|pdb|4DNU|A Chain A, Crystal Structure Of The W285a Mutant Of Uvb-Resistance
Protein Uvr8
Length = 372
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 111 IRIKQIACGDSHCLAVTXEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 164
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 165 IKXVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 216
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 217 ---XSXVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 265
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 266 NS-FISQISGGARHTXALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 313
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 314 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 365
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 5 PRKVLIISAGASHSVALLSGDIVCSWGR---GEDGQLGHGDAEDRPSPTQLSALDGHQIV 61
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G YSWG + G+LG G+ P I+ +
Sbjct: 62 SVTCGADHTVAYSQSGXE-------VYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 112
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 113 -IKQIACGDSHCLAVT--------XEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 162
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 163 IRIKXVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRTDRLVPERVTSTG- 213
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 214 -GEKXS---XVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 258
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K V G ++++ +GAL+ +G G L P + + ++
Sbjct: 216 KXSXVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 272
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G+ H AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 273 SGGARHTXALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 321
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V+CG HT +T R + +G G NGQLG G + + P+ +
Sbjct: 322 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVD-------RNFPKIIE 366
Query: 253 LVSVD 257
+SVD
Sbjct: 367 ALSVD 371
>gi|379318631|pdb|4DNV|A Chain A, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318632|pdb|4DNV|B Chain B, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318633|pdb|4DNV|C Chain C, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
gi|379318634|pdb|4DNV|D Chain D, Crystal Structure Of The W285f Mutant Of Uvb-Resistance
Protein Uvr8
Length = 370
Score = 109 bits (272), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 162
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 163 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 214
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 215 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 263
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 264 NS-FISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 311
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 312 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 363
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 3 PRKVLIISAGASHSVALLSGDIVCSWGR---GEDGQLGHGDAEDRPSPTQLSALDGHQIV 59
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 60 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 110
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 111 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 160
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 161 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRTDRLVPERVTSTG- 211
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 212 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 256
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 214 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 270
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 271 SGGFRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 319
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+V+CG HT +T R + +G G NGQLG G + P+ ++ L
Sbjct: 320 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVDRNFPKIIEAL 366
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G ++A+ + G L+ WG S P V VV+V+
Sbjct: 267 ISQISGGFRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS---PVQVRFPDDQKVVQVS 323
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E ++WG NGQLG+G+ R PKIIE + D
Sbjct: 324 CGWRHTLAVT--------ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVD 369
>gi|312282233|dbj|BAJ33982.1| unnamed protein product [Thellungiella halophila]
Length = 440
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 90/295 (30%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 173
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 174 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + LVP +++ L
Sbjct: 226 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLVPHKLEALG 274
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
V + + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 275 NSV-ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 322
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 323 --RIPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESLDRNFPKII 374
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 113/250 (45%), Gaps = 37/250 (14%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+ TP P V+ ++ G+ H VAL+S D+VC SWG +GQLG GD
Sbjct: 6 VADEVTPPP------RRVLIISAGASHSVALLSG-------DIVC-SWGRGEDGQLGHGD 51
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
E RL P + + + VTCG+ HT + + +E W G G+ G+LG
Sbjct: 52 AEDRLSPTQLSALDDHQ---IVSVTCGADHTVAYSESR-----MEVYSW--GWGDFGRLG 101
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG + P +K L + + + CG H V+ G+V SWG + N L
Sbjct: 102 HGNSSDLFTPLPIKAL-HGIRIKQIACGDSHCLAVTMEGEVQSWGRNQ------NGQLGL 154
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ D++ P I G + + VA GA HT VT+DG L+ WG GR G LG G
Sbjct: 155 GDTEDSLVPQKI--QAFEGIRIK---MVAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGD 208
Query: 352 TIDFFAPAIV 361
D P V
Sbjct: 209 RNDRLVPERV 218
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P ++ + AG S+A+ + + WG + G +P+ + H +V
Sbjct: 14 PRRVLIISAGASHSVALLSGDIVCSWGRG---EDGQLGHGDAEDRLSPTQLSALDDHQIV 70
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA Y + YSWG + G+LG G+ P I+ +
Sbjct: 71 SVTCGADHTVA-------YSESRMEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 122 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 171
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 172 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRNDRLVPERVTSAG- 222
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 223 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLVP 267
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 13/120 (10%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+V ++V P+ V ++S G H+ + S V SWG + + L +A D +
Sbjct: 5 MVADEVTPPPRRVLIIS--AGASHSVALLSGDIVCSWGRGE------DGQLGHGDAEDRL 56
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP +S H V V CGA HTV ++ +++SWG G G LG G + D F P
Sbjct: 57 SPTQLSALDDH-----QIVSVTCGADHTVAYSESRMEVYSWGWGDFGRLGHGNSSDLFTP 111
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/185 (24%), Positives = 76/185 (41%), Gaps = 29/185 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLVPHKLEALGNSVISQI 281
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + + V
Sbjct: 282 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVRIPDDQK---V 330
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V+CG HT +T R + +G G NGQLG G + + P+ +
Sbjct: 331 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESLD-------RNFPKIIE 375
Query: 253 LVSVD 257
+SVD
Sbjct: 376 ALSVD 380
>gi|326518338|dbj|BAJ88198.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326519062|dbj|BAJ96530.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 441
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 93/295 (31%), Positives = 131/295 (44%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IKI + G LA+ AG + WG N L +TE S P + F G +
Sbjct: 119 IKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTE------DSLLPQTIQAFEGIS 172
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR R P+ + + D
Sbjct: 173 VKMIAAGAEHTAAVT--------EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDK 224
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +V+ L
Sbjct: 225 ---MVLVACGWRHTITVSS--------SGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALK 273
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ G HT ++S G ++ WG K +G NA D SP +
Sbjct: 274 DS-STSQISGGWRHTMALTSDGKLYGWGWNKFGQVGAGDNA--------DHCSPAQV--- 321
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ P+ Q QVACG HT+ T+ +++WGRG SG LG G+ +D P I+
Sbjct: 322 --NFPEEQKVAQVACGWRHTLAFTEK-KNVFAWGRGTSGQLGHGEIVDRNTPVII 373
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 108/351 (30%), Positives = 150/351 (42%), Gaps = 62/351 (17%)
Query: 32 DGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI--- 87
DGQLG + + LVP VI F G I SV G + A
Sbjct: 43 DGQLGHGDAEDRLVPTVISGFDAPG------------------ITSVICGADHTTAYSED 84
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
++ W WG D G + FTP PV G + ++ACG H +A+ AGE
Sbjct: 85 EHQVYSWGWG-----DFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGE 139
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
SWG N NGQLGLG E L P+ I+ F S V + G+ HTA +T
Sbjct: 140 VL--------SWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS---VKMIAAGAEHTAAVTE 188
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ + +G G G LG G VPE+V + + +V V CG HT VS
Sbjct: 189 --------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSV-EGDKMVLVACGWRHTITVS 239
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
S+G ++++G K L + D + P + K Q++ G HT+
Sbjct: 240 SSGSLYTYGWSK------YGQLGHGDFEDHLVPHKV-----EALKDSSTSQISGGWRHTM 288
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 378
+T DG KL+ WG + G +G G D +PA V +P EE K ++ G
Sbjct: 289 ALTSDG-KLYGWGWNKFGQVGAGDNADHCSPAQVNFP---EEQKVAQVACG 335
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 82/239 (34%), Positives = 118/239 (49%), Gaps = 41/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV V+ G+ H VAL++ +++C +WG +GQLG GD E RL P +I F D
Sbjct: 15 AVVLVSAGASHSVALLAG-------NVLC-TWGRGEDGQLGHGDAEDRLVPTVISGF--D 64
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+P + V CG+ HT + E +++G G+ G+LGHG + P+ VK L
Sbjct: 65 AP-GITSVICGADHTTAYSED-------EHQVYSWGWGDFGRLGHGNSTDVFTPQPVKAL 116
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRN-EAGDAISPIL 302
Q + + + CG H V+ AG+V SWG + GLG ++ L + +A + IS +
Sbjct: 117 -QGIKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTEDSLLPQTIQAFEGISVKM 175
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
I A GA HT VT+DG ++ WG GR G LG G D F P V
Sbjct: 176 I----------------AAGAEHTAAVTEDG-DIYGWGWGRYGNLGLGDRNDRFVPEKV 217
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 17/118 (14%)
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
E P V LVS G H+ + + + +WG + + L +A D + P +ISG
Sbjct: 11 EAPPAVVLVS--AGASHSVALLAGNVLCTWGRGE------DGQLGHGDAEDRLVPTVISG 62
Query: 306 NGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F P V CGA HT ++D ++++SWG G G LG G + D F P V
Sbjct: 63 -------FDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDVFTPQPV 113
Score = 39.3 bits (90), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 62/158 (39%), Gaps = 30/158 (18%)
Query: 33 GQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG + LVP +E +L+D S + + G ++A+ + G
Sbjct: 253 GQLGHGDFEDHLVPHKVE---------ALKDSSTSQ---------ISGGWRHTMALTSDG 294
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
L+ WG G +P+ V V +VACG H +A
Sbjct: 295 KLYGWGWNKF---GQVGAGDNADHCSPAQVNFPEEQKVAQVACGWRHTLAFT-------- 343
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
E ++WG +GQLG G+ R P II+ + D P
Sbjct: 344 EKKNVFAWGRGTSGQLGHGEIVDRNTPVIIDALSPDGP 381
>gi|449673459|ref|XP_002164132.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Hydra
magnipapillata]
Length = 2284
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 137/283 (48%), Gaps = 45/283 (15%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
SV +GG +A+ + G + WG+ ++ G +L+S P + F G V ++CG
Sbjct: 650 SVHSGGNHVMALTSDGLAFSWGD---GENGQLGHGNLMSCSKPHLIEAFVGKIVTDISCG 706
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S H A+V E+ Y+WG + G+LG GD E+ L+PK + F + V +V
Sbjct: 707 SAHSAAIV--------ENKYLYTWGLGDFGRLGHGDEETILQPKFVTHF---LGYNVVQV 755
Query: 196 TCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+CGS T +T + W++G G+ G+LG G ++ L+P +V++L + + +
Sbjct: 756 SCGSRDAQTVCITDDDK--------VWSWGDGDFGKLGRGGSERCLIPVEVEQL-RGLQI 806
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI---SPILISG-NGPH 309
+ CG T ++ G VW+WG R G I P L+ G G H
Sbjct: 807 CKILCGAQFTVALTKTGTVWTWG---------KGDFYRLGHGTDIHVRQPKLVEGLRGKH 857
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ +A GA H + VT DG +++SWG G LGTG+T
Sbjct: 858 ------VIDIAVGALHCLAVTQDG-EVFSWGDNDHGQLGTGET 893
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 91/294 (30%), Positives = 129/294 (43%), Gaps = 43/294 (14%)
Query: 75 CSVKAGGMMS-LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
C AGG S I N G L+ G S + G ++ SP V + V K
Sbjct: 593 CKFIAGGSKSTFFITNKGKLYSCGE----SSFGKLGIGDITGNVTSPRLVTGLNQLIVTK 648
Query: 132 VAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V+ G HV+AL S G + +SWG NGQLG G+ S +P +IE F
Sbjct: 649 VSVHSGGNHVMALTSDG--------LAFSWGDGENGQLGHGNLMSCSKPHLIEAFVGK-- 698
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +++CGS H+A + K +T+GLG+ G+LGHG ++ L P+ V
Sbjct: 699 -IVTDISCGSAHSAAIVENK--------YLYTWGLGDFGRLGHGDEETILQPKFVTHFLG 749
Query: 250 YVYLVSVDCGLFHTSVVSSAGD--VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Y +V V CG V D VWSWG + G L R + + P+ +
Sbjct: 750 Y-NVVQVSCGSRDAQTVCITDDDKVWSWG-DGDFG-----KLGRGGSERCLIPVEV---- 798
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ CGA TV +T G +W+WG+G LG G I P +V
Sbjct: 799 -EQLRGLQICKILCGAQFTVALTKTG-TVWTWGKGDFYRLGHGTDIHVRQPKLV 850
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 143/334 (42%), Gaps = 58/334 (17%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
+GQLG S T+ +P LE N IK SV +GG LA+ + G
Sbjct: 1504 NGQLGLGYSE-----------TVTSPRLLESIKHIN----IKKISVHSGGRHCLALSSDG 1548
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG + G + +S P + F G + + G H A+ GE
Sbjct: 1549 EVFSWGE---GEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLNGE---- 1601
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD + +L+PK +E + V +V CGS L
Sbjct: 1602 ----LYTWGKGRYGRLGHGDSDDQLKPKQVEALQF---FFVLDVACGSGDAQTLCITNDD 1654
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + VP +++L +V V+CG + ++ G
Sbjct: 1655 N------VWSWGDGDYGKLGRGGSDGCKVPMIIEDLSGK-GIVKVECGSQFSMALTKYGV 1707
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHT 326
+++WG KG LG + R P++++ F V ++CG+ H
Sbjct: 1708 LYTWG--KGDYYRLGHGTEEHVRR--------PMMVTA------LFNKIVTSISCGSLHC 1751
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
V+ TD+G +++ WG G LG G I P +
Sbjct: 1752 VVCTDEG-EVYCWGDNDEGQLGDGTIIARQTPTL 1784
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 102/209 (48%), Gaps = 24/209 (11%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ ++ G NNGQLGLG E+ P+++E+ + + V G H L+
Sbjct: 1495 LVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKI-SVHSGGRHCLALSS------- 1546
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ +++G GE+G+LGHG Q++ P++++ + + ++ G H++ + G++++
Sbjct: 1547 -DGEVFSWGEGEDGKLGHGNRQTSSQPKRIEFFCGKI-ITNICAGGSHSAAIGLNGELYT 1604
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG + L ++ D + P + +F + VACG+ A T+ +T+D
Sbjct: 1605 WGKGR------YGRLGHGDSDDQLKPKQV-----EALQFFFVLDVACGSGDAQTLCITND 1653
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+WSWG G G LG G + P I+
Sbjct: 1654 D-NVWSWGDGDYGKLGRGGSDGCKVPMII 1681
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/195 (29%), Positives = 83/195 (42%), Gaps = 31/195 (15%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I N +W WG+ D G P + D G +VKV CGS+
Sbjct: 1642 SGDAQTLCITNDDNVWSWGD---GDYGKLGRGGSDGCKVPMIIEDLSGKGIVKVECGSQF 1698
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTC 197
+AL G V Y+WG + +LG G E RP ++ FN+ V ++C
Sbjct: 1699 SMALTKYG--------VLYTWGKGDYYRLGHGTEEHVRRPMMVTALFNK----IVTSISC 1746
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H + T D E CW G + GQLG GT ++ Q L ++ +D
Sbjct: 1747 GSLHCVVCT------DEGEVYCW--GDNDEGQLGDGT----IIARQTPTLNTFLLNKKID 1794
Query: 258 ---CGLFHTSVVSSA 269
CG HT S++
Sbjct: 1795 RISCGSAHTIAWSTS 1809
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS L+P +EQ ++IC + G ++A+ G
Sbjct: 782 GKLGRGGSERCLIPVEVEQL------------------RGLQICKILCGAQFTVALTKTG 823
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+W WG D G + + P V G V+ +A G+ H +A+ GE +
Sbjct: 824 TVWTWGK---GDFYRLGHGTDIHVRQPKLVEGLRGKHVIDIAVGALHCLAVTQDGEVF-- 878
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
SWG N++GQLG G+ + + P +I + + V CGS H+
Sbjct: 879 ------SWGDNDHGQLGTGETDVKKVPNLITGLHNHR---IKYVACGSSHS 920
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 19/149 (12%)
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSW 275
++ + G G NGQLG G +++ P ++ + + +SV G H +SS G+V+SW
Sbjct: 1494 ALVFATGYGNNGQLGLGYSETVTSPRLLESIKHINIKKISVHSGGRHCLALSSDGEVFSW 1553
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTDD 332
G E G + + P +F + + G +H+ + +
Sbjct: 1554 G--------------EGEDGKLGHGNRQTSSQPKRIEFFCGKIITNICAGGSHSAAIGLN 1599
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L++WG+GR G LG G + D P V
Sbjct: 1600 G-ELYTWGKGRYGRLGHGDSDDQLKPKQV 1627
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 76/190 (40%), Gaps = 27/190 (14%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
++ I + +W WG+ D G P V G + K+ CG++ VAL
Sbjct: 764 TVCITDDDKVWSWGD---GDFGKLGRGGSERCLIPVEVEQLRGLQICKILCGAQFTVALT 820
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
G ++WG + +LG G +PK++E V ++ G+ H
Sbjct: 821 KTG--------TVWTWGKGDFYRLGHGTDIHVRQPKLVEGLRGKH---VIDIAVGALHCL 869
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH- 262
+T + +++G ++GQLG G T VP + L + + V CG H
Sbjct: 870 AVTQ--------DGEVFSWGDNDHGQLGTGETDVKKVPNLITGLHNH-RIKYVACGSSHS 920
Query: 263 ---TSVVSSA 269
T + +SA
Sbjct: 921 IAWTEITTSA 930
>gi|297797389|ref|XP_002866579.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
gi|297312414|gb|EFH42838.1| UVB-resistance 8 [Arabidopsis lyrata subsp. lyrata]
Length = 440
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 173
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 174 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRNDRLVPERVTSAGGEK 225
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 226 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 275 NS-FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 322
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 323 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 129/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 14 PRTVLIISAGASHSVALLSGDIVCSWGRG---EDGQLGHGDAEDRPSPTQLSALDGHQIV 70
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 71 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 122 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 171
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 172 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRNDRLVPERVTSAG- 222
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 223 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 267
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+ ++V P+ V ++S G H+ + S V SWG + + L +A D
Sbjct: 5 MAADEVTAPPRTVLIIS--AGASHSVALLSGDIVCSWGRGE------DGQLGHGDAEDRP 56
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP +S H V V CGA HTV + G +++SWG G G LG G + D F P
Sbjct: 57 SPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP 111
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 281
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 282 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 330
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V+CG HT +T R + +G G NGQLG G + + P+ +
Sbjct: 331 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVD-------RNFPKIIE 375
Query: 253 LVSVD 257
+SVD
Sbjct: 376 ALSVD 380
>gi|15237540|ref|NP_201191.1| protein UV-B resistance 8 [Arabidopsis thaliana]
gi|10177674|dbj|BAB11034.1| UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|21928123|gb|AAM78089.1| AT5g63860/MGI19_6 [Arabidopsis thaliana]
gi|23308399|gb|AAN18169.1| At5g63860/MGI19_6 [Arabidopsis thaliana]
gi|332010422|gb|AED97805.1| protein UV-B resistance 8 [Arabidopsis thaliana]
Length = 440
Score = 108 bits (270), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 173
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 174 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 226 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 275 NS-FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 322
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 323 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWGRG---EDGQLGHGDAEDRPSPTQLSALDGHQIV 70
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 71 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 122 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 171
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 172 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRTDRLVPERVTSTG- 222
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 223 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 267
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+ ++V P+ V ++S G H+ + S V SWG + + L +A D
Sbjct: 5 MAADEVTAPPRKVLIIS--AGASHSVALLSGDIVCSWGRGE------DGQLGHGDAEDRP 56
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP +S H V V CGA HTV + G +++SWG G G LG G + D F P
Sbjct: 57 SPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP 111
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 281
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 282 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 330
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V+CG HT +T R + +G G NGQLG G + + P+ +
Sbjct: 331 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVD-------RNFPKIIE 375
Query: 253 LVSVD 257
+SVD
Sbjct: 376 ALSVD 380
>gi|147782117|emb|CAN67581.1| hypothetical protein VITISV_010346 [Vitis vinifera]
Length = 423
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 36/251 (14%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
FTP P+ HG + ++ACG H +A+ GE SWG N NGQLGLG E
Sbjct: 98 FTPQPIKALHGLRIKQIACGDSHCLAVTMDGEVQ--------SWGRNQNGQLGLGTTEDS 149
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P+ I+ F S V V G+ HTA +T + + +G G G LG G
Sbjct: 150 LVPQKIQAFQGVS---VKMVAAGAEHTAAVTE--------DGELYGWGWGRYGNLGLGDR 198
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
LVPE+V + + V +V V CG HT VSS+G ++++G K L +
Sbjct: 199 NDRLVPEKVSTV-EGVKMVKVACGWRHTISVSSSGGLYTYGWSK------YGQLGHGDFE 251
Query: 296 DAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D ++P + Q+ + +++ G HT+ +T DG KL+ WG + G +G G +
Sbjct: 252 DHLTPHKLE-------ALQENLISEISGGWRHTMALTSDG-KLYGWGWNKFGQVGVGDNV 303
Query: 354 DFFAPAIVLWP 364
D +P V +P
Sbjct: 304 DHCSPVQVKFP 314
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ G + WG N L +TE S P + F G +
Sbjct: 109 LRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE------DSLVPQKIQAFQGVS 162
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V VA G+EH A+ GE Y WG G LGLGDR RL P+ + T
Sbjct: 163 VKMVAAGAEHTAAVTEDGE--------LYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK 214
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +V CG HT ++ +T+G + GQLGHG + L P +++ L
Sbjct: 215 ---MVKVACGWRHTISVSS--------SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEAL- 262
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
Q + + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 263 QENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV--------DHCSPVQVKF- 313
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q V ++CG HT+ VT+ ++SWGRG +G LG G++ID P ++
Sbjct: 314 ----PHEQKVVHISCGWRHTLAVTER-QNVFSWGRGTNGQLGHGESIDRNIPKMI 363
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 118/265 (44%), Gaps = 61/265 (23%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+ ++VC SWG +GQLG GD E RL P + +
Sbjct: 18 VLLISAGASHSVALLXG-------NVVC-SWGRGEDGQLGHGDAEDRLSPTYLSALDGHE 69
Query: 189 PWAVYEVTCGSFHT------------------------ALLTHRKRPNDMLESMCW---- 220
V VTCG+ HT AL R + +S C
Sbjct: 70 ---VVSVTCGADHTTAYSESFTQVYSWGCDLFTPQPIKALHGLRIKQIACGDSHCLAVTM 126
Query: 221 -----TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--W 273
++G +NGQLG GTT+ +LVP++++ Q V + V G HT+ V+ G++ W
Sbjct: 127 DGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF-QGVSVKMVAAGAEHTAAVTEDGELYGW 185
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
WG LGL + D + P +S G K V+VACG HT+ V+ G
Sbjct: 186 GWGRYGNLGL--------GDRNDRLVPEKVS--TVEGVKM---VKVACGWRHTISVSSSG 232
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAP 358
L+++G + G LG G D P
Sbjct: 233 -GLYTYGWSKYGQLGHGDFEDHLTP 256
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 99/267 (37%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SLVP I+ F + + V AG + A+
Sbjct: 137 QNGQLGLGTTEDSLVPQKIQAF------------------QGVSVKMVAAGAEHTAAVTE 178
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D + P V G +VKVACG H +++ S
Sbjct: 179 DGELYGWGWGRYGNLGLGDRNDR--------LVPEKVSTVEGVKMVKVACGWRHTISVSS 230
Query: 145 AGETYK--------------------------GEDLVC------------------YSWG 160
+G Y E+L+ Y WG
Sbjct: 231 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWG 290
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD P ++ ++ V ++CG HT +T R+ +
Sbjct: 291 WNKFGQVGVGDNVDHCSPVQVKFPHEQK---VVHISCGWRHTLAVTERQN--------VF 339
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G NGQLGHG + +P+ ++ L
Sbjct: 340 SWGRGTNGQLGHGESIDRNIPKMIEVL 366
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G ++A+ + G L+ WG G V +P V H VV ++
Sbjct: 267 ISEISGGWRHTMALTSDGKLYGWGWNKF---GQVGVGDNVDHCSPVQVKFPHEQKVVHIS 323
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E +SWG NGQLG G+ R PK+IE + D
Sbjct: 324 CGWRHTLAVT--------ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSAD 369
>gi|340505322|gb|EGR31664.1| hypothetical protein IMG5_104860 [Ichthyophthirius multifiliis]
Length = 1126
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 137/296 (46%), Gaps = 58/296 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALW--------MWGNCPLPDSSTEGGFSLVSSFTPSPVWDF 124
+I + G +L ID L+ + GN L D +L F
Sbjct: 22 EIIYIACGHHHTLIIDENNQLYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKF-------- 73
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
V+VACG+ H +AL +G + +SWG N GQLG G++ L+PK +
Sbjct: 74 -----VQVACGATHSLALTISG--------IIFSWGKNLRGQLGHGNQNDCLKPKEVI-- 118
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
Q+ A Y + CG H+A ++ K +T+G G+ +LGHG T L+P++V
Sbjct: 119 -QNDIIAEY-IDCGDQHSAFVSKNKE--------LYTWGNGQYYRLGHGVTTDELIPKKV 168
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPIL 302
L Y Y+ V CG+ HT +V+ G V++W GM LG+ + D + L
Sbjct: 169 VVLEDY-YVTHVSCGMNHTLIVTGEGFVYAWGDGMYGKLGV----------SEDCKTQTL 217
Query: 303 ISGNGPHGPKFQDP---VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ G KF+ QVA G+ H++ ++ +G ++++WG +SG LG G D
Sbjct: 218 PTRVGMICKKFRKNKMYYQVAAGSMHSLALSTNG-QIFTWGSSKSGNLGIGYNKDI 272
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 24/168 (14%)
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
+ CG HT ++ + ++FG+G+ G LG+ + +P+Q+ ++ V
Sbjct: 26 IACGHHHTLIIDENNQ--------LYSFGMGKTGLLGNEHLEDVKIPQQLNLKQKF---V 74
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
V CG H+ ++ +G ++SWG K L L D + P + N
Sbjct: 75 QVACGATHSLALTISGIIFSWG--KNL----RGQLGHGNQNDCLKPKEVIQNDIIAEY-- 126
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ CG H+ V+ + +L++WG G+ LG G T D P V+
Sbjct: 127 ----IDCGDQHSAFVSKNK-ELYTWGNGQYYRLGHGVTTDELIPKKVV 169
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 107/266 (40%), Gaps = 45/266 (16%)
Query: 82 MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVV 140
+ ++AI G ++WG G+S ++ P + T++ AC +
Sbjct: 438 LHAIAISQKGQAYVWGKNIYYQLGV--GYSCNYNYIPQKLQGILETKTIIMSACSDKFSA 495
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL--RPKIIETFNQDSPWAVYEVTCG 198
L GE + ++G ++ G LG ++ + PK++ D P +Y + CG
Sbjct: 496 LLTDKGEVW--------TFGTSDCGVLGHQEKNYYVVPEPKMVN----DIPQMIY-IACG 542
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV--------------PEQV 244
++ KR + +G GQLG ++ + EQ+
Sbjct: 543 PQGMVSISAHKR-------QLYAWGNNIYGQLGIKIYRTEMNVNEYDEDKNGKQQNNEQI 595
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
K P+ V + SVD G+FH+ + + G ++S G+ G N + G ILI
Sbjct: 596 K--PEEVQIKSVDMGMFHSVAIDNNGKIYSCGLRIYSGQA-NVFNVEDAKGIDDQFILIR 652
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVT 330
N +F +QV+C HT+ ++
Sbjct: 653 TNELQNQQF---IQVSCSEYHTLALS 675
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 54/118 (45%), Gaps = 14/118 (11%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++ + CG HT ++ ++S+GM K GL N L + I K
Sbjct: 23 IIYIACGHHHTLIIDENNQLYSFGMGKT-GLLGNEHL---------EDVKIPQQLNLKQK 72
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
F VQVACGA H++ +T G ++SWG+ G LG G D P V+ + E+
Sbjct: 73 F---VQVACGATHSLALTISGI-IFSWGKNLRGQLGHGNQNDCLKPKEVIQNDIIAEY 126
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 68/166 (40%), Gaps = 31/166 (18%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-----DR 172
P + F + + ++C H +A+ G+ Y WG N QLG+G +
Sbjct: 419 PFQIQYFKNNIIRYISCSYLHAIAISQKGQ--------AYVWGKNIYYQLGVGYSCNYNY 470
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ I+ET + C +ALLT + WTFG + G LGH
Sbjct: 471 IPQKLQGILET------KTIIMSACSDKFSALLTDKGE--------VWTFGTSDCGVLGH 516
Query: 233 GTTQSALVPE--QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+VPE V ++PQ +Y+ G+ S+ + +++WG
Sbjct: 517 QEKNYYVVPEPKMVNDIPQMIYIACGPQGM--VSISAHKRQLYAWG 560
>gi|219847608|ref|YP_002462041.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541867|gb|ACL23605.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 778
Score = 108 bits (269), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 123/292 (42%), Gaps = 41/292 (14%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + ++ AGG+ + A+ ++G +W WG DS G S S TP V V
Sbjct: 257 PSGMTAIAAGGLHTCALMSSGGVWCWGR---NDSGQLGDGSDTDSSTPVAVSGLP-SGVT 312
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A G H AL +GE + WG N GQLG G +R P + P
Sbjct: 313 AIAAGDYHTCALTGSGEVW--------CWGGNGFGQLGDGTTTARSTPAAVSGL----PS 360
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + G +HT L M W +G +GQLG GTT + P V LP
Sbjct: 361 GVETIAAGDYHTCAL--------MSSGGVWCWGRNNSGQLGDGTTTARSTPAAVSGLPSG 412
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V ++ G HT + S+G VW WG+ + L D+ +P+ +SG
Sbjct: 413 VTAIAA--GGLHTCALMSSGGVWCWGLNN------SGQLGDGSDTDSSTPVAVSG----- 459
Query: 311 PKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V+ +A G HT +T G +W WGR SG LG G TI P V
Sbjct: 460 --LASGVETIAAGGWHTCALTSSG-GVWCWGRNNSGQLGDGSTIYHITPVAV 508
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 126/309 (40%), Gaps = 46/309 (14%)
Query: 60 LEDDSKTNHKAPIKIC-------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D S T+ P+ + ++ AGG + A+ ++G +W WG +S G S
Sbjct: 443 LGDGSDTDSSTPVAVSGLASGVETIAAGGWHTCALTSSGGVWCWGR---NNSGQLGDGST 499
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ TP V V +A G H AL +G + WG N +GQLG G
Sbjct: 500 IYHITPVAVSGLP-SGVTAIAAGDYHTCALTGSGGVW--------CWGYNLSGQLGDGTT 550
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R P + V + G FHT LT W +G +GQLG
Sbjct: 551 TDRSTPVAVSGLTS----GVTVIAAGRFHTCALTSSGG--------VWCWGANFDGQLGD 598
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT + P V LP V ++ G +HT ++S+G+VW WG + G + + T
Sbjct: 599 GTTTNRTTPVAVSGLPSGVTAIAA--GGWHTCALTSSGEVWCWG-DNYYGQLGDGTTTNR 655
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
A+S + P G +A G HT +T G ++W WG G LG G T
Sbjct: 656 STPGAVSGL------PSGVT-----AIAAGWEHTCALTSSG-EVWCWGDNYYGQLGDGTT 703
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 704 TNRSTPGAV 712
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 122/299 (40%), Gaps = 43/299 (14%)
Query: 66 TNHKAPIK-ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF 124
T+ +P++ + ++ AGG + A+ +G + WG D G + + TP V
Sbjct: 46 TSSFSPLQGVTAIAAGGAHTCALTGSGGVMCWGG---NDFGQLGDGTPTTRSTPGAVSGL 102
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
V +A G+ H AL +G + C WGAN +GQLG G R P +
Sbjct: 103 P-SGVTAIAAGNYHTCALTGSG------GVRC--WGANYSGQLGNGLTFGRSTPGAVSGL 153
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPE 242
P V + G HT L MCW G+N GQLG GTT + P
Sbjct: 154 ----PSGVTAIAAGGDHTCALMSSG------GVMCW----GDNYYGQLGDGTTTNRRTPV 199
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V LP V ++ G HT ++ +G+VW WG G + + T + + A L
Sbjct: 200 AVSGLPSGVTAIAA--GGLHTCALTGSGEVWCWGYNY-YGQLGDGTTTYSRSTPAAVGGL 256
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
SG +A G HT + G +W WGR SG LG G D P V
Sbjct: 257 PSGM----------TAIAAGGLHTCALMSSG-GVWCWGRNDSGQLGDGSDTDSSTPVAV 304
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 95/229 (41%), Gaps = 43/229 (18%)
Query: 60 LEDDSKTNHKAPIKICS-------VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGG 109
L D + T+ P+ + + AG + A+ ++G +W WG + L D +T
Sbjct: 545 LGDGTTTDRSTPVAVSGLTSGVTVIAAGRFHTCALTSSGGVWCWGANFDGQLGDGTT--- 601
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ TP V V +A G H AL S+GE + WG N GQLG
Sbjct: 602 ---TNRTTPVAVSGLP-SGVTAIAAGGWHTCALTSSGEVW--------CWGDNYYGQLGD 649
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN-- 227
G +R P + P V + G HT LT E CW G+N
Sbjct: 650 GTTTNRSTPGAVSGL----PSGVTAIAAGWEHTCALTSSG------EVWCW----GDNYY 695
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
GQLG GTT + P V LP V ++ G++HT ++ +G V WG
Sbjct: 696 GQLGDGTTTNRSTPGAVSGLPSGVTAIAA--GVYHTCALTGSGGVMCWG 742
>gi|383280368|pdb|4D9S|A Chain A, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
gi|383280369|pdb|4D9S|B Chain B, Crystal Structure Of Arabidopsis Thaliana Uvr8 (Uv
Resistance Locus 8)
Length = 406
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 121 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 174
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 175 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 226
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 227 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 275
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 276 NS-FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 323
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 324 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 375
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 15 PRKVLIISAGASHSVALLSGDIVCSWGRG---EDGQLGHGDAEDRPSPTQLSALDGHQIV 71
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 72 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 122
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 123 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 172
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 173 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRTDRLVPERVTSTG- 223
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 224 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 268
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+ ++V P+ V ++S G H+ + S V SWG + + L +A D
Sbjct: 6 MAADEVTAPPRKVLIIS--AGASHSVALLSGDIVCSWGRGE------DGQLGHGDAEDRP 57
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP +S H V V CGA HTV + G +++SWG G G LG G + D F P
Sbjct: 58 SPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP 112
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 226 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 282
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 283 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 331
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V+CG HT +T R + +G G NGQLG G + + P+ +
Sbjct: 332 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVD-------RNFPKIIE 376
Query: 253 LVSVD 257
+SVD
Sbjct: 377 ALSVD 381
>gi|379318635|pdb|4DNW|A Chain A, Crystal Structure Of Uvb-Resistance Protein Uvr8
gi|379318636|pdb|4DNW|B Chain B, Crystal Structure Of Uvb-Resistance Protein Uvr8
Length = 374
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 109 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 162
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 163 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 214
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 215 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 263
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 264 NS-FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 311
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 312 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 363
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 3 PRKVLIISAGASHSVALLSGDIVCSWGR---GEDGQLGHGDAEDRPSPTQLSALDGHQIV 59
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 60 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 110
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 111 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 160
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 161 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRTDRLVPERVTSTG- 211
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 212 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 256
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 214 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 270
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 271 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 319
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+V+CG HT +T R + +G G NGQLG G + P+ ++ L
Sbjct: 320 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVDRNFPKIIEAL 366
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 48/114 (42%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G ++A+ + G L+ WG S P V VV+V+
Sbjct: 267 ISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCS---PVQVRFPDDQKVVQVS 323
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E ++WG NGQLG+G+ R PKIIE + D
Sbjct: 324 CGWRHTLAVT--------ERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVD 369
>gi|5478530|gb|AAD43920.1|AF130441_1 UVB-resistance protein UVR8 [Arabidopsis thaliana]
Length = 440
Score = 108 bits (269), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIP 173
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 174 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 226 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 275 NS-FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 322
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 323 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWGRG---EDGQLGHGDAEDRPSPTQLSALDGHQIV 70
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 71 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 122 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 171
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 172 IPIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRTDRLVPERVTSTG- 222
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 223 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 267
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+ ++V P+ V ++S G H+ + S V SWG + + L +A D
Sbjct: 5 MAADEVTAPPRKVLIIS--AGASHSVALLSGDIVCSWGRGE------DGQLGHGDAEDRP 56
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP +S H V V CGA HTV + G +++SWG G G LG G + D F P
Sbjct: 57 SPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP 111
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 281
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 282 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 330
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V+CG HT +T R + +G G NGQLG G + + P+ +
Sbjct: 331 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVD-------RNFPKIIE 375
Query: 253 LVSVD 257
+SVD
Sbjct: 376 ALSVD 380
>gi|225438373|ref|XP_002274569.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Vitis
vinifera]
gi|296082603|emb|CBI21608.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 121/251 (48%), Gaps = 36/251 (14%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
FTP P+ HG + ++ACG H +A+ GE SWG N NGQLGLG E
Sbjct: 110 FTPQPIKALHGLRIKQIACGDSHCLAVTMDGE--------VQSWGRNQNGQLGLGTTEDS 161
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P+ I+ F S V V G+ HTA +T + + +G G G LG G
Sbjct: 162 LVPQKIQAFQGVS---VKMVAAGAEHTAAVTE--------DGELYGWGWGRYGNLGLGDR 210
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
LVPE+V + + V +V V CG HT VSS+G ++++G K L +
Sbjct: 211 NDRLVPEKVSTV-EGVKMVKVACGWRHTISVSSSGGLYTYGWSK------YGQLGHGDFE 263
Query: 296 DAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D ++P + Q+ + +++ G HT+ +T DG KL+ WG + G +G G +
Sbjct: 264 DHLTPHKLE-------ALQENLISEISGGWRHTMALTSDG-KLYGWGWNKFGQVGVGDNV 315
Query: 354 DFFAPAIVLWP 364
D +P V +P
Sbjct: 316 DHCSPVQVKFP 326
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 133/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ G + WG N L +TE S P + F G +
Sbjct: 121 LRIKQIACGDSHCLAVTMDGEVQSWGRNQNGQLGLGTTE------DSLVPQKIQAFQGVS 174
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V VA G+EH A+ GE Y WG G LGLGDR RL P+ + T
Sbjct: 175 VKMVAAGAEHTAAVTEDGE--------LYGWGWGRYGNLGLGDRNDRLVPEKVSTVEGVK 226
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +V CG HT ++ +T+G + GQLGHG + L P +++ L
Sbjct: 227 ---MVKVACGWRHTISVSS--------SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEAL- 274
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
Q + + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 275 QENLISEISGGWRHTMALTSDGKLYGWGWNKFGQVGVGDNV--------DHCSPVQVKF- 325
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q V ++CG HT+ VT+ ++SWGRG +G LG G++ID P ++
Sbjct: 326 ----PHEQKVVHISCGWRHTLAVTER-QNVFSWGRGTNGQLGHGESIDRNIPKMI 375
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 109/235 (46%), Gaps = 35/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S ++VC SWG +GQLG GD E RL P + +
Sbjct: 18 VLLISAGASHSVALLSG-------NVVC-SWGRGEDGQLGHGDAEDRLSPTYLSALDGHE 69
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V VTCG+ HT + + +++G G+ G+LGHG + P+ +K L
Sbjct: 70 ---VVSVTCGADHTTAYSESF-------TQVYSWGWGDFGRLGHGNSSDLFTPQPIKAL- 118
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG H V+ G+V SWG + N L D++ P I
Sbjct: 119 HGLRIKQIACGDSHCLAVTMDGEVQSWGRNQ------NGQLGLGTTEDSLVPQKIQ---- 168
Query: 309 HGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
FQ VA GA HT VT+DG +L+ WG GR G LG G D P V
Sbjct: 169 ---AFQGVSVKMVAAGAEHTAAVTEDG-ELYGWGWGRYGNLGLGDRNDRLVPEKV 219
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 132/292 (45%), Gaps = 39/292 (13%)
Query: 70 APIK-ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP++ + + AG S+A+ + + WG + G +P+ + GH
Sbjct: 13 APVRRVLLISAGASHSVALLSGNVVCSWGRG---EDGQLGHGDAEDRLSPTYLSALDGHE 69
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV V CG++H A Y YSWG + G+LG G+ P+ I+ +
Sbjct: 70 VVSVTCGADHTTA-------YSESFTQVYSWGWGDFGRLGHGNSSDLFTPQPIKALH--- 119
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ ++ CG H +T ++ ++G +NGQLG GTT+ +LVP++++
Sbjct: 120 GLRIKQIACGDSHCLAVT--------MDGEVQSWGRNQNGQLGLGTTEDSLVPQKIQAF- 170
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V + V G HT+ V+ G++ W WG LGL + D + P +S
Sbjct: 171 QGVSVKMVAAGAEHTAAVTEDGELYGWGWGRYGNLGL--------GDRNDRLVPEKVS-- 220
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K V+VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 221 TVEGVKM---VKVACGWRHTISVSSSG-GLYTYGWSKYGQLGHGDFEDHLTP 268
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 99/267 (37%), Gaps = 87/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SLVP I+ F + + V AG + A+
Sbjct: 149 QNGQLGLGTTEDSLVPQKIQAF------------------QGVSVKMVAAGAEHTAAVTE 190
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D + P V G +VKVACG H +++ S
Sbjct: 191 DGELYGWGWGRYGNLGLGDRNDR--------LVPEKVSTVEGVKMVKVACGWRHTISVSS 242
Query: 145 AGETYK--------------------------GEDLVC------------------YSWG 160
+G Y E+L+ Y WG
Sbjct: 243 SGGLYTYGWSKYGQLGHGDFEDHLTPHKLEALQENLISEISGGWRHTMALTSDGKLYGWG 302
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD P ++ ++ V ++CG HT +T R+ +
Sbjct: 303 WNKFGQVGVGDNVDHCSPVQVKFPHEQK---VVHISCGWRHTLAVTERQN--------VF 351
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G NGQLGHG + +P+ ++ L
Sbjct: 352 SWGRGTNGQLGHGESIDRNIPKMIEVL 378
Score = 45.1 bits (105), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G ++A+ + G L+ WG G V +P V H VV ++
Sbjct: 279 ISEISGGWRHTMALTSDGKLYGWGWNKF---GQVGVGDNVDHCSPVQVKFPHEQKVVHIS 335
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E +SWG NGQLG G+ R PK+IE + D
Sbjct: 336 CGWRHTLAVT--------ERQNVFSWGRGTNGQLGHGESIDRNIPKMIEVLSAD 381
>gi|332027112|gb|EGI67208.1| Putative E3 ubiquitin-protein ligase HERC2 [Acromyrmex echinatior]
Length = 4853
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 150/334 (44%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S ++P ++E IK +V +GG +A+ + G
Sbjct: 4057 GRLGIGGTDSVMIPTLLESI----------------QHVFIKKVAVSSGGKHCIALSSEG 4100
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + VS P + D G +V +ACG H A+ SAG
Sbjct: 4101 HVYSWGE---GDDGKLGHGNKVSYDRPKLIEDLLGVEIVDIACGGHHSAAITSAG----- 4152
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD + +LRPK++E QD + V +V CGS L
Sbjct: 4153 ---WLYTWGKGRYGRLGHGDSDDQLRPKVVEAL-QD--YKVIDVACGSGDAQTLCVTDDD 4206
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + VP ++ L + +V V+CG + ++ +G
Sbjct: 4207 N------VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAG-LGVVKVECGSQFSVALTRSGA 4259
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4260 VYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4304
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+D G ++++WG G LG G T P +V
Sbjct: 4305 ACSDKG-EVFTWGDNDEGQLGDGTTSALHRPRLV 4337
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + +S P + +
Sbjct: 3099 IKKVAVHSGGKHALALTQDGKVFSWGE---GEDGKLGHGNCISLDKPKLIEVLKSKRIRD 3155
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S GE Y+WG G+LG GD ++ RPK+++
Sbjct: 3156 IACGSGHSAAIASNGE--------LYTWGLGEYGRLGHGDTITQTRPKLVQALIGHR--- 3204
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + +++G G+ G+LG G + P V L
Sbjct: 3205 VVQVACGSRDAQTMALT--------TDGYVYSWGDGDFGKLGRGGSDGCYTPLLVDRL-N 3255
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ ++ V+CG + ++ G+VW+WG KG L P L+ G
Sbjct: 3256 NLGVIQVECGAQFSLALTKYGEVWTWG--KG----DYFRLGHGNDHHVRKPTLV--EGLR 3307
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + VA GA H + VTD G ++++WG G G G T P++V
Sbjct: 3308 GKKI---IHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTSVNRKPSLV 3355
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 126/277 (45%), Gaps = 45/277 (16%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVVKVACGSEHVVALVSAGETY 149
A+++WG L D GG L S PV+ + +A GS+ + + G+
Sbjct: 3013 AVYVWG---LNDKDQLGG--LKGSKIKLPVYSETLSKLKPIHIAGGSKTLFIVSQEGK-- 3065
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
Y+ G NG+LGLGD + PK I +Q V V G H LT
Sbjct: 3066 ------LYACGEGTNGRLGLGDDNNMCEPKAIPFLSQFVIKKV-AVHSGGKHALALTQ-- 3116
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +++G GE+G+LGHG S P+ + E+ + + + CG H++ ++S
Sbjct: 3117 ------DGKVFSWGEGEDGKLGHGNCISLDKPKLI-EVLKSKRIRDIACGSGHSAAIASN 3169
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAIS---PILISGNGPHGPKFQDPVQVACGA--A 324
G++++WG+ R GD I+ P L+ H VQVACG+ A
Sbjct: 3170 GELYTWGL---------GEYGRLGHGDTITQTRPKLVQALIGH-----RVVQVACGSRDA 3215
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ +T DGY ++SWG G G LG G + + P +V
Sbjct: 3216 QTMALTTDGY-VYSWGDGDFGKLGRGGSDGCYTPLLV 3251
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 108/255 (42%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S AI + G L+ WG L + G ++ P V GH VV+V
Sbjct: 3152 RIRDIACGSGHSAAIASNGELYTWG---LGEYGRLGHGDTITQTRPKLVQALIGHRVVQV 3208
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS + + Y YSWG + G+LG G + P +++ N V
Sbjct: 3209 ACGSRDAQTMALTTDGY------VYSWGDGDFGKLGRGGSDGCYTPLLVDRLNN---LGV 3259
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CG+ + LT WT+G G+ +LGHG P V+ L +
Sbjct: 3260 IQVECGAQFSLALTKYGE--------VWTWGKGDYFRLGHGNDHHVRKPTLVEGL-RGKK 3310
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++ V G H V+ G V++WG + G N + + N P L+ H +
Sbjct: 3311 IIHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTSVNR-----KPSLV-----HDLE 3359
Query: 313 FQDPVQVACGAAHTV 327
+V+CG++H++
Sbjct: 3360 DARVNRVSCGSSHSI 3374
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/257 (26%), Positives = 108/257 (42%), Gaps = 52/257 (20%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
V F+ P+ T++ +H +AL +D YSWG + G+LG GD
Sbjct: 560 VHGFSDKPI------TMIASHADGKHYLALT--------QDGCVYSWGNGDGGRLGHGDT 605
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
S PK+IE + + + + CGS ++A L+ +T+G G G+LGH
Sbjct: 606 ISYDEPKLIEALLEKN---IIFIACGSTYSAALSANGE--------LYTWGRGNYGRLGH 654
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G + P V L + +V V CG T V+++G V+SWG
Sbjct: 655 GNFDDVMTPTLVTTLKGHT-VVHVACGSGDSQTLCVTASGIVFSWG-------------- 699
Query: 291 RNEAGDAISPILISGNGPHGPKFQDP------VQVACGAAHTVLVTDDGYKLWSWGRGRS 344
GD +G PK D V+V CG+ + +T G ++++WG+G +
Sbjct: 700 ---DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG-EVYTWGKGDA 755
Query: 345 GVLGTGKTIDFFAPAIV 361
LG G P ++
Sbjct: 756 YRLGHGSEEHVRYPKVI 772
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E+ + P + G T +
Sbjct: 3997 YGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQL----AGGEQTLFAV-------TAD 4045
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
++ G G G+LG G T S ++P ++ + Q+V++ V+V G H +SS G V+S
Sbjct: 4046 GKIYSTGYGAAGRLGIGGTDSVMIPTLLESI-QHVFIKKVAVSSGGKHCIALSSEGHVYS 4104
Query: 275 WGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG + LG S R + + + + I V +ACG H+ +T
Sbjct: 4105 WGEGDDGKLGHGNKVSYDRPKLIEDLLGVEI-------------VDIACGGHHSAAITSA 4151
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L++WG+GR G LG G + D P +V
Sbjct: 4152 GW-LYTWGKGRYGRLGHGDSDDQLRPKVV 4179
Score = 65.5 bits (158), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 106/258 (41%), Gaps = 49/258 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S A+ G L+ WG + G + TP+ V GHTVV VA
Sbjct: 622 IIFIACGSTYSAALSANGELYTWGR---GNYGRLGHGNFDDVMTPTLVTTLKGHTVVHVA 678
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS + + ++G + +SWG + G+LG G + PKI++ +
Sbjct: 679 CGSGDSQTLCVTASG--------IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN--- 727
Query: 192 VYEVTCGS-FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V CGS F AL H + +T+G G+ +LGHG+ + P+ ++ L
Sbjct: 728 VVKVFCGSQFSAALTAHGE---------VYTWGKGDAYRLGHGSEEHVRYPKVIESLRDR 778
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ + G H ++ V+ WG RN+ G I P L G
Sbjct: 779 -KVKDLSVGTTHILALTEDQFVYGWG--------------RNDYGQ-IDPTL-------G 815
Query: 311 PKFQDPVQVACGAAHTVL 328
P +P ++ TV+
Sbjct: 816 PIISEPTLCPTLSSKTVI 833
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 4194 SGDAQTLCVTDDDNVWSWGD---GDYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQF 4250
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 4251 SVALTRSG--------AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4299
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4300 SLHCVACSDKGE--------VFTWGDNDEGQLGDGTTSALHRPRLVHAL-QGKKITRVAC 4350
Query: 259 GLFHTSVVSSA 269
G HT S+A
Sbjct: 4351 GSAHTLAWSTA 4361
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS+ P ++++ +G + V+ G SLA+ G
Sbjct: 3235 GKLGRGGSDGCYTPLLVDRLNNLG------------------VIQVECGAQFSLALTKYG 3276
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+W WG D G + P+ V G ++ VA G+ H +A+ G+
Sbjct: 3277 EVWTWGK---GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVAVGALHCLAVTDTGQV--- 3330
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
Y+WG N++GQ G G +P ++ V V+CGS H+
Sbjct: 3331 -----YAWGDNDHGQQGNGTTSVNRKPSLVHDLEDAR---VNRVSCGSSHS 3373
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + PS V D V +V
Sbjct: 3310 KIIHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTSVNRKPSLVHDLEDARVNRV 3366
Query: 133 ACGSEHVVALVSAGETYKG-EDLVCYSWGANNNGQLGLG 170
+CGS H +A V + G +D V + + GQ+ LG
Sbjct: 3367 SCGSSHSIAWVLVDQPSNGNQDPVTFPTVRDPLGQMCLG 3405
>gi|428179449|gb|EKX48320.1| hypothetical protein GUITHDRAFT_162457 [Guillardia theta CCMP2712]
Length = 580
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 123/254 (48%), Gaps = 34/254 (13%)
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
F + SFT +G + VACG H VA+ GE SWG N GQLG
Sbjct: 55 FPVSLSFTALAHESLNG--AIYVACGGHHTVAVTEDGEVV--------SWGWGNEGQLGS 104
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G+ + P +++ S V V CG +HTA++T D+ MCW G G +GQ
Sbjct: 105 GNAFDQTVPAVVKAL---SNHRVCGVACGYYHTAVVT------DVGLVMCW--GKGNSGQ 153
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNA 287
LG G S+L+P V L + + CG+ HT +S G+++SWG + LG+ +
Sbjct: 154 LGQGDWTSSLLPRTVSTLYNE-KIRQIACGMAHTLALSVNGEIYSWGAGADGQLGVGKH- 211
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
+ E D +P + + +F +ACG+ H + +TDD +L+SWG G G L
Sbjct: 212 ---QEETADVATPQKVRVDEEEKFEF-----IACGSRHCMAITDD-CRLFSWGLGADGRL 262
Query: 348 GTGKTIDFFAPAIV 361
G G + F+P +V
Sbjct: 263 GLGDSESRFSPTVV 276
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 148/346 (42%), Gaps = 73/346 (21%)
Query: 32 DGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+GQLG + + VP V++ +NH+ +C V G + + +
Sbjct: 99 EGQLGSGNAFDQTVPAVVKAL--------------SNHR----VCGVACGYYHTAVVTDV 140
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G + WG +S G SS P V + + ++ACG H +AL GE Y
Sbjct: 141 GLVMCWGK---GNSGQLGQGDWTSSLLPRTVSTLYNEKIRQIACGMAHTLALSVNGEIY- 196
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV-------YE-VTCGSFHT 202
SWGA +GQLG+G + ET + +P V +E + CGS H
Sbjct: 197 -------SWGAGADGQLGVGKHQE-------ETADVATPQKVRVDEEEKFEFIACGSRHC 242
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T R +++GLG +G+LG G ++S P V+ + + + V G H
Sbjct: 243 MAITDDCR--------LFSWGLGADGRLGLGDSESRFSPTVVRRSIENLRICYVAAGGHH 294
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP--------HGPKFQ 314
T+V+S G++++ C S + GDA + + H + +
Sbjct: 295 TAVLSDNGEIFT---------CGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLR 345
Query: 315 DP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
D ++ ACG HT++++ G ++++WG G LGTG T +P
Sbjct: 346 DKKIIKAACGDTHTLVISTAG-EVFAWGAAEDGQLGTGGTEGANSP 390
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/216 (32%), Positives = 101/216 (46%), Gaps = 43/216 (19%)
Query: 165 GQLGLGDRESRLRPKIIETFNQDSP--------------WAVYEVTCGSFHTALLTHRKR 210
G+LG GD S+L PK + F++ P A+Y V CG HT +T
Sbjct: 33 GRLGHGDTLSQLEPKRLR-FDKRFPVSLSFTALAHESLNGAIY-VACGGHHTVAVT---- 86
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ E + W G G GQLG G VP VK L + + V CG +HT+VV+ G
Sbjct: 87 --EDGEVVSW--GWGNEGQLGSGNAFDQTVPAVVKALSNH-RVCGVACGYYHTAVVTDVG 141
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLV 329
V WG KG + L + + ++ P +S + + + Q+ACG AHT+ +
Sbjct: 142 LVMCWG--KG----NSGQLGQGDWTSSLLPRTVS------TLYNEKIRQIACGMAHTLAL 189
Query: 330 TDDGYKLWSWGRGRSGVLGTGK----TIDFFAPAIV 361
+ +G +++SWG G G LG GK T D P V
Sbjct: 190 SVNG-EIYSWGAGADGQLGVGKHQEETADVATPQKV 224
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 65/155 (41%), Gaps = 30/155 (19%)
Query: 223 GLGENGQLGHGTTQSALVPEQV---KELPQYVYLVS-----------VDCGLFHTSVVSS 268
G GE G+LGHG T S L P+++ K P + + V CG HT V+
Sbjct: 28 GWGEFGRLGHGDTLSQLEPKRLRFDKRFPVSLSFTALAHESLNGAIYVACGGHHTVAVTE 87
Query: 269 AGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
G+V W WG E LG A D P ++ H VACG HT
Sbjct: 88 DGEVVSWGWGNEGQLG--------SGNAFDQTVPAVVKALSNH-----RVCGVACGYYHT 134
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+VTD G + WG+G SG LG G P V
Sbjct: 135 AVVTDVGL-VMCWGKGNSGQLGQGDWTSSLLPRTV 168
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 74/184 (40%), Gaps = 39/184 (21%)
Query: 32 DGQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG S S P V+ + S+E+ ++IC V AGG + + +
Sbjct: 259 DGRLGLGDSESRFSPTVVRR--------SIEN---------LRICYVAAGGHHTAVLSDN 301
Query: 91 GALWMWGNCPL---------PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
G ++ G P + + +L + ++K ACG H +
Sbjct: 302 GEIFTCGRGSYGQLGHGDADPQLTLKKARALRHGCLLLHIVQLRDKKIIKAACGDTHTLV 361
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ +AGE + +WGA +GQLG G E P + + V +V+CG H
Sbjct: 362 ISTAGEVF--------AWGAAEDGQLGTGGTEGANSPVELTSLR----GLVGDVSCGLVH 409
Query: 202 TALL 205
+A +
Sbjct: 410 SAAV 413
>gi|449522147|ref|XP_004168089.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cucumis sativus]
Length = 302
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 120/250 (48%), Gaps = 38/250 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
S P + F G ++ VA G+EH A+ GE + WG G LGLGDR
Sbjct: 17 SLVPQKIQAFEGISIKMVAAGAEHTAAVTEDGE--------LFGWGWGRYGNLGLGDRND 68
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
RL P+ + + + D + V CG HT ++ +T+G + GQLGHG
Sbjct: 69 RLVPQKVSSVDGDK---MVMVACGWRHTISVSSL--------GGLYTYGWSKYGQLGHGD 117
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ LVP +++ L + + + G HT +++ G ++ WG K + A
Sbjct: 118 FEDRLVPHRLEAL-RGDNISQISGGWRHTMALTTDGKLYGWGWNK---------FGQVGA 167
Query: 295 GDAI---SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
GD I SPI I P+ Q +Q++CG HT+ VTD ++SWGRG +G LG G+
Sbjct: 168 GDNIDHCSPIQIK-----FPQDQKVIQISCGWRHTLAVTDK-QNVFSWGRGTNGQLGHGE 221
Query: 352 TIDFFAPAIV 361
++D P I+
Sbjct: 222 SVDRNTPMIL 231
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
I + G ++A+ G L+ WG G + +P + V+++
Sbjct: 134 NISQISGGWRHTMALTTDGKLYGWGWNKF---GQVGAGDNIDHCSPIQIKFPQDQKVIQI 190
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+CG H +A+ + +SWG NGQLG G+ R P I+E + D
Sbjct: 191 SCGWRHTLAVT--------DKQNVFSWGRGTNGQLGHGESVDRNTPMILEALSVD 237
>gi|357464765|ref|XP_003602664.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|358348400|ref|XP_003638235.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355491712|gb|AES72915.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355504170|gb|AES85373.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 439
Score = 107 bits (268), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 91/295 (30%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ G + WG N L +TE S P + F G
Sbjct: 120 LRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGTTE------DSLVPQKIQTFQGVP 173
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH VA+ GE Y WG G LGLGDR R P E + D
Sbjct: 174 IKMVAAGAEHSVAITENGE--------LYGWGWGRYGNLGLGDRNDRCIP---EKVSVDC 222
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V V CG HT ++ +T+G + GQLGHG + LVP +++
Sbjct: 223 DKMVL-VACGWRHTISVSSSGE--------LYTYGWSKYGQLGHGDCKDHLVPHKLQAFS 273
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ + V G HT +++ G ++ WG K +G+ N D SP+ +
Sbjct: 274 DKL-ICQVSGGWRHTMALTTGGQLYGWGWNKFGQVGVGDNV--------DRCSPVQVKF- 323
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q Q++CG HT+ VT+ ++SWGRG +G LG G TID+ P I+
Sbjct: 324 ----PHDQKVAQISCGWRHTIAVTEKD-NVYSWGRGTNGQLGIGDTIDWNYPKII 373
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 113/235 (48%), Gaps = 35/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G H VAL+S ++VC SWG +GQLG GD + RL P + +
Sbjct: 17 VLLISAGGSHSVALISG-------NVVC-SWGRGEDGQLGHGDTDDRLLPTQLSALDAQQ 68
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG+ HT + K +E W G G+ G+LGHG + +P+ ++ L
Sbjct: 69 ---IVSVVCGADHTLAYSESK-----VEVYSW--GWGDFGRLGHGNSSDLFIPQPIRAL- 117
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG H V+ G+V SWG + N L D++ P I
Sbjct: 118 QGLRIKQIACGDSHCLAVTMEGEVQSWGRNQ------NGQLGLGTTEDSLVPQKIQ---- 167
Query: 309 HGPKFQD-PVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
FQ P++ VA GA H+V +T++G +L+ WG GR G LG G D P V
Sbjct: 168 ---TFQGVPIKMVAAGAEHSVAITENG-ELYGWGWGRYGNLGLGDRNDRCIPEKV 218
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 125/290 (43%), Gaps = 39/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P ++ + AGG S+A+ + + WG + G P+ + +V
Sbjct: 14 PRRVLLISAGGSHSVALISGNVVCSWGR---GEDGQLGHGDTDDRLLPTQLSALDAQQIV 70
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H +A Y + YSWG + G+LG G+ P+ I
Sbjct: 71 SVVCGADHTLA-------YSESKVEVYSWGWGDFGRLGHGNSSDLFIPQPIRALQ---GL 120
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG GTT+ +LVP++++ Q
Sbjct: 121 RIKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGTTEDSLVPQKIQTF-QG 171
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + V G H+ ++ G++ W WG LGL + D P +S +
Sbjct: 172 VPIKMVAAGAEHSVAITENGELYGWGWGRYGNLGL--------GDRNDRCIPEKVSVD-- 221
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
V VACG HT+ V+ G +L+++G + G LG G D P
Sbjct: 222 ----CDKMVLVACGWRHTISVSSSG-ELYTYGWSKYGQLGHGDCKDHLVP 266
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 101/267 (37%), Gaps = 88/267 (32%)
Query: 31 MDGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG + +SLVP I+ F + PIK+ V AG S+AI
Sbjct: 148 QNGQLGLGTTEDSLVPQKIQTFQGV----------------PIKM--VAAGAEHSVAITE 189
Query: 90 AGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G L+ WG N L D + P V +V VACG H +++ S
Sbjct: 190 NGELYGWGWGRYGNLGLGDRNDR--------CIPEKV-SVDCDKMVLVACGWRHTISVSS 240
Query: 145 AGETYK--------------------------GEDLVC------------------YSWG 160
+GE Y + L+C Y WG
Sbjct: 241 SGELYTYGWSKYGQLGHGDCKDHLVPHKLQAFSDKLICQVSGGWRHTMALTTGGQLYGWG 300
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+GD R P ++ F D V +++CG HT +T + +
Sbjct: 301 WNKFGQVGVGDNVDRCSPVQVK-FPHDQ--KVAQISCGWRHTIAVTEKDN--------VY 349
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKEL 247
++G G NGQLG G T P+ ++ L
Sbjct: 350 SWGRGTNGQLGIGDTIDWNYPKIIEAL 376
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 49/114 (42%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
IC V G ++A+ G L+ WG G V +P V H V +++
Sbjct: 277 ICQVSGGWRHTMALTTGGQLYGWGWNKF---GQVGVGDNVDRCSPVQVKFPHDQKVAQIS 333
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E YSWG NGQLG+GD PKIIE + D
Sbjct: 334 CGWRHTIAVT--------EKDNVYSWGRGTNGQLGIGDTIDWNYPKIIEALSVD 379
>gi|390359737|ref|XP_003729552.1| PREDICTED: E3 ubiquitin-protein ligase HERC2, partial
[Strongylocentrotus purpuratus]
Length = 4064
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 137/294 (46%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G S ++ P + +
Sbjct: 2293 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHLSRMNCEKPRLLEALKTKRIRD 2349
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++LRPK+++
Sbjct: 2350 IACGSSHSAAVTSSGE--------LYTWGLGEYGRLGHGDSTTQLRPKLVKALVGKR--- 2398
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS LT E M +++G G+ G+LG G ++ VP V+ L
Sbjct: 2399 VIQVACGSRDAQTLTLTD------EGMVYSWGDGDFGKLGRGGSEGCSVPHNVERL-NGQ 2451
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ ++CG + ++ AG VW+WG KG LG ++ + + + +
Sbjct: 2452 GVIQIECGAQFSLALTKAGQVWTWG--KGDYFRLGHGTDSHVRKPQVAE----------- 2498
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + + VA GA H + VTD G ++++WG G G G T PA+V
Sbjct: 2499 --GLKGKKIIHVAVGALHCLAVTDTG-QVFAWGDNDHGQQGDGSTTVNKKPALV 2549
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 144/334 (43%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S+ P ++E IK +V +GG +LA+ G
Sbjct: 3244 GRLGIGGTDSVSTPTLLESI----------------QHVHIKKVAVNSGGKHALALSVEG 3287
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG + G + P + G V+ +ACG H + S+GE
Sbjct: 3288 EVYSWGEG---EDGKLGHGNRTQCDRPRVIESLRGKEVIDIACGGAHSACVTSSGE---- 3340
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD E +LRPK+ + + V +V CGS + L
Sbjct: 3341 ----LYTWGKGRYGRLGHGDSEDQLRPKMADALKG---YRVIDVACGSGDSQTLCISDDD 3393
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + VP++V L + + V+CG + ++ +G
Sbjct: 3394 N------VWSWGDGDYGKLGRGGSDGCKVPQKVDAL-SSIGVCKVECGSQFSIALTKSGC 3446
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 3447 VYTWG--KGDYHRLGHGSDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 3491
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+D G ++++WG G LG G T P IV
Sbjct: 3492 ACSDQG-EVYTWGDNDEGQLGDGTTNAIQRPRIV 3524
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 74/255 (29%), Positives = 110/255 (43%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V G V++V
Sbjct: 2346 RIRDIACGSSHSAAVTSSGELYTWG---LGEYGRLGHGDSTTQLRPKLVKALVGKRVIQV 2402
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L T E +V YSWG + G+LG G E P +E N V
Sbjct: 2403 ACGSRDAQTL-----TLTDEGMV-YSWGDGDFGKLGRGGSEGCSVPHNVERLNGQ---GV 2453
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT WT+G G+ +LGHGT P QV E +
Sbjct: 2454 IQIECGAQFSLALTK--------AGQVWTWGKGDYFRLGHGTDSHVRKP-QVAEGLKGKK 2504
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++ V G H V+ G V++WG + G + S T N+ P L+ G G +
Sbjct: 2505 IIHVAVGALHCLAVTDTGQVFAWG-DNDHGQQGDGSTTVNK-----KPALV--QGLEGVR 2556
Query: 313 FQDPVQVACGAAHTV 327
+VACG++H+
Sbjct: 2557 I---TRVACGSSHST 2568
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 128/295 (43%), Gaps = 54/295 (18%)
Query: 79 AGGMMSLAIDNA-GALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVAC 134
AGG SL + A G ++ G T G L SS P V + V KVA
Sbjct: 2245 AGGSKSLFVVTAEGKVYACGE------GTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAV 2298
Query: 135 --GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G H +AL G+ + SWG ++G+LG R + +P+++E +
Sbjct: 2299 HSGGRHAMALTVDGKVF--------SWGEGDDGKLGHLSRMNCEKPRLLEALKTKR---I 2347
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CGS H+A +T +T+GLGE G+LGHG + + L P+ VK L
Sbjct: 2348 RDIACGSSHSAAVTS--------SGELYTWGLGEYGRLGHGDSTTQLRPKLVKALVGK-R 2398
Query: 253 LVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGN 306
++ V CG T ++ G V+SWG + G G S+ N + N
Sbjct: 2399 VIQVACGSRDAQTLTLTDEGMVYSWGDGDFGKLGRGGSEGCSVPHN---------VERLN 2449
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G Q +Q+ CGA ++ +T G ++W+WG+G LG G P +
Sbjct: 2450 G------QGVIQIECGAQFSLALTKAG-QVWTWGKGDYFRLGHGTDSHVRKPQVA 2497
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 34/211 (16%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC---GSFHTALLTHRKRPND 213
+ WG N+ QLG G R S+++ ++ F + +V C GS ++T
Sbjct: 2209 FVWGLNDKDQLG-GPRGSKIKTPVLNEF-----LSSLKVVCCAGGSKSLFVVT------- 2255
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDV 272
E + G G NG+LG G++Q+ +P+QV L QYV V+V G H ++ G V
Sbjct: 2256 -AEGKVYACGEGTNGRLGLGSSQNVDIPKQVNGLSQYVVKKVAVHSGGRHAMALTVDGKV 2314
Query: 273 WSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+SWG + LG + + +A+ I +ACG++H+ VT
Sbjct: 2315 FSWGEGDDGKLGHLSRMNCEKPRLLEALKTKRIR-------------DIACGSSHSAAVT 2361
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L++WG G G LG G + P +V
Sbjct: 2362 SSG-ELYTWGLGEYGRLGHGDSTTQLRPKLV 2391
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P IE+ P + G T +
Sbjct: 3184 YGWGHNHRGQLGGIEGAKVKVPTAIESLTSLRPIQI----VGGEQTLFAV-------TAD 3232
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G +G+LG G T S P ++ + Q+V++ V+V+ G H +S G+V+S
Sbjct: 3233 GKLYATGYGASGRLGIGGTDSVSTPTLLESI-QHVHIKKVAVNSGGKHALALSVEGEVYS 3291
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG E G + + T+ + I + + ++ + +ACG AH+ VT G
Sbjct: 3292 WG-EGEDGKLGHGNRTQCDRPRVIESL----------RGKEVIDIACGGAHSACVTSSG- 3339
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG+GR G LG G + D P +
Sbjct: 3340 ELYTWGKGRYGRLGHGDSEDQLRPKMA 3366
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 75/191 (39%), Gaps = 23/191 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P V V KV CGS+
Sbjct: 3381 SGDSQTLCISDDDNVWSWGDG---DYGKLGRGGSDGCKVPQKVDALSSIGVCKVECGSQF 3437
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 3438 SIALTKSG--------CVYTWGKGDYHRLGHGSDDHVRRPRKVAALQGKK---IISIATG 3486
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + + +T+G + GQLG GTT + P V L Q + +V C
Sbjct: 3487 SLHCVACSD--------QGEVYTWGDNDEGQLGDGTTNAIQRPRIVTAL-QDKKITNVAC 3537
Query: 259 GLFHTSVVSSA 269
G HT S++
Sbjct: 3538 GSAHTVAWSTS 3548
Score = 40.0 bits (92), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G S + P+ V G + +V
Sbjct: 2504 KIIHVAVGALHCLAVTDTGQVFAWGD---NDHGQQGDGSTTVNKKPALVQGLEGVRITRV 2560
Query: 133 ACGSEHVVA 141
ACGS H A
Sbjct: 2561 ACGSSHSTA 2569
>gi|307204521|gb|EFN83201.1| Probable E3 ubiquitin-protein ligase HERC2 [Harpegnathos saltator]
Length = 4791
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 96/334 (28%), Positives = 150/334 (44%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S +VP ++E IK +V +GG LA+ + G
Sbjct: 3995 GRLGIGGTDSVMVPTLLESI----------------QHVFIKKVAVNSGGKHCLALSSEG 4038
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + +S P V D G +V +ACG H A+ SAG
Sbjct: 4039 HVYSWGE---GDDGKLGHGNRLSYDRPKLVEDLLGIEIVDIACGGHHSAAITSAG----- 4090
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD + +LRPK++E QD + V +V CGS L
Sbjct: 4091 ---WLYTWGKGRYGRLGHGDSDDQLRPKVVEAL-QD--YKVIDVACGSGDAQTLCVTDDD 4144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + VP ++ L + ++ V+CG + ++ +G
Sbjct: 4145 N------VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAG-LGVIKVECGSQFSVALTRSGA 4197
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4198 VYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4242
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+D G ++++WG G LG G T P +V
Sbjct: 4243 ACSDKG-EVFTWGDNDEGQLGDGTTSALQRPRLV 4275
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 130/290 (44%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + + P + +
Sbjct: 3038 IKKVAVHSGGKHALALTQDGKVFSWGE---GEDGKLGHGNCTTLDKPRLIESLKSKRIRD 3094
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S GE Y+WG G+LG GD ++++PK+++ S
Sbjct: 3095 IACGSGHSAAIASNGE--------LYTWGLGEYGRLGHGDTATQMKPKLVQAL---SGQR 3143
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS ++ + +T+G G+ G+LG G + P V L +
Sbjct: 3144 VVQVACGSRDAQTMSL------TADGCVYTWGDGDFGKLGRGGSDGCYTPLLVDRL-NGL 3196
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V V+CG + ++ G+VW+WG KG L P L+ G G
Sbjct: 3197 GVVQVECGAQFSLALTKYGEVWTWG--KG----DYFRLGHGNDHHVRKPTLV--EGLRGK 3248
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G TI P++V
Sbjct: 3249 KI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTIVNRKPSLV 3294
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 120/272 (44%), Gaps = 35/272 (12%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
A+++WG L D GG P + +A GS+ + + G+
Sbjct: 2952 AVYVWG---LNDKDQLGGLKGSKIKIPVRSEVLSKLKPIHIAGGSKTLFIVSQEGK---- 3004
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+ G NG+LGLGD + PK+I +Q V V G H LT
Sbjct: 3005 ----LYACGEGTNGRLGLGDDYNMCEPKLIPFLSQYVIKKV-AVHSGGKHALALTQ---- 3055
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ +++G GE+G+LGHG + P ++ L + + + CG H++ ++S G+
Sbjct: 3056 ----DGKVFSWGEGEDGKLGHGNCTTLDKPRLIESL-KSKRIRDIACGSGHSAAIASNGE 3110
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLV 329
+++WG+ + L + + P L+ Q VQVACG+ A T+ +
Sbjct: 3111 LYTWGLGE------YGRLGHGDTATQMKPKLV-----QALSGQRVVQVACGSRDAQTMSL 3159
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T DG +++WG G G LG G + + P +V
Sbjct: 3160 TADGC-VYTWGDGDFGKLGRGGSDGCYTPLLV 3190
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 118/276 (42%), Gaps = 61/276 (22%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
SF+ PV T++ +H +AL +D YSWG + G+LG GD S
Sbjct: 503 SFSDKPV------TMIASHSDGKHYLALT--------QDGCVYSWGNGDGGRLGHGDNIS 548
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
PK+IET + + + + CGS ++A L+ +T+G G G+LGHG+
Sbjct: 549 HDEPKLIETLLEKN---IIFIACGSTYSAALS--------ASGELYTWGRGNYGRLGHGS 597
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
VP V L ++ +V V CG T V+++G V+SWG
Sbjct: 598 NDDVTVPTLVTTLKGHM-VVHVACGSGDSQTLCVTASGIVFSWG---------------- 640
Query: 293 EAGDAISPILISGNGPHGPKFQDP------VQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
GD +G PK D V+V CG + +T G ++++WG+G +
Sbjct: 641 -DGDYGKLGRGGSDGSKTPKIVDKLLDINVVRVFCGGQFSAALTARG-EVYTWGKGDAYR 698
Query: 347 LGTGKTIDFFAPAIVLWPPLTEEFKQ---DELNTGG 379
LG G V +P L E + +L+ GG
Sbjct: 699 LGHGNE------EHVRYPKLIESLRDKKIKDLSVGG 728
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 98/210 (46%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G ++++ P E+ + P + G T
Sbjct: 3935 YGWGHNHRGQLG-GLEGAKIKLPAPCESLSALRPIQL----AGGEQTLFAV-------TA 3982
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ ++ G G G+LG G T S +VP ++ + Q+V++ V+V+ G H +SS G V+
Sbjct: 3983 DGKVYSTGYGAAGRLGIGGTDSVMVPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGHVY 4041
Query: 274 SWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
SWG + LG S R + + + I I V +ACG H+ +T
Sbjct: 4042 SWGEGDDGKLGHGNRLSYDRPKLVEDLLGIEI-------------VDIACGGHHSAAITS 4088
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L++WG+GR G LG G + D P +V
Sbjct: 4089 AGW-LYTWGKGRYGRLGHGDSDDQLRPKVV 4117
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G V+KV CGS+
Sbjct: 4132 SGDAQTLCVTDDDNVWSWGD---GDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQF 4188
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 4189 SVALTRSG--------AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4237
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4238 SLHCVACSDKGE--------VFTWGDNDEGQLGDGTTSALQRPRLVHAL-QGKKITRVAC 4288
Query: 259 GLFHTSVVSSA 269
G HT S+A
Sbjct: 4289 GSAHTLAWSTA 4299
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ V+ G SLA+ G +W WG D G + P+ V G +V VA
Sbjct: 3198 VVQVECGAQFSLALTKYGEVWTWGK---GDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVA 3254
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P ++ + +
Sbjct: 3255 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTIVNRKPSLVHELDDTR---MN 3303
Query: 194 EVTCGSFHT 202
V+CGS H+
Sbjct: 3304 RVSCGSSHS 3312
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
C + MSL D G ++ WG+ D G +TP V +G VV+V C
Sbjct: 3149 CGSRDAQTMSLTAD--GCVYTWGD---GDFGKLGRGGSDGCYTPLLVDRLNGLGVVQVEC 3203
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G++ +AL GE ++WG + +LG G+ +P ++E +
Sbjct: 3204 GAQFSLALTKYGEV--------WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK---IVH 3252
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V G+ H +T D + W G ++GQ G+GTT P V EL +
Sbjct: 3253 VAVGALHCLAVT------DTGQVYAW--GDNDHGQQGNGTTIVNRKPSLVHELDD-TRMN 3303
Query: 255 SVDCGLFHT 263
V CG H+
Sbjct: 3304 RVSCGSSHS 3312
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 4/99 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + + PS V + + +V
Sbjct: 3249 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTIVNRKPSLVHELDDTRMNRV 3305
Query: 133 ACGSEHVVALVSAGETYKG-EDLVCYSWGANNNGQLGLG 170
+CGS H +A + + G ++ V + + GQ+ LG
Sbjct: 3306 SCGSSHSIAWILVDQPTNGNQEPVTFQTARDPLGQMCLG 3344
>gi|21741206|emb|CAD41017.1| OSJNBb0086G13.15 [Oryza sativa Japonica Group]
Length = 256
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 113/236 (47%), Gaps = 33/236 (13%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV V+ G+ H VAL++ +++C SWG +GQLG GD E RL P ++ F+
Sbjct: 23 AVVLVSAGASHSVALLAG-------NVLC-SWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+P + V CG+ HT + E +++G G+ G+LGHG + P+ VK L
Sbjct: 75 AP-GITSVICGADHTTAYSED-------EQQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL 126
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q + + + CG H V+ AG+V SWG + N L D++ P I
Sbjct: 127 -QGIKIKQIACGDSHCLAVTMAGEVQSWGRNQ------NGQLGLGTTEDSLLPQKIQ--- 176
Query: 308 PHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 177 ----SFEGVCVKMIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRLVPEKV 227
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 91/220 (41%), Gaps = 44/220 (20%)
Query: 32 DGQLGFS-GSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI--- 87
DGQLG + LVP V+ F + AP I SV G + A
Sbjct: 51 DGQLGHGDAEDRLVPTVLSGF---------------DAAAP-GITSVICGADHTTAYSED 94
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
+ W WG D G + FTP PV G + ++ACG H +A+ AGE
Sbjct: 95 EQQVYSWGWG-----DFGRLGHGNSSDVFTPQPVKALQGIKIKQIACGDSHCLAVTMAGE 149
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
SWG N NGQLGLG E L P+ I++F V + G+ HTA +T
Sbjct: 150 VQ--------SWGRNQNGQLGLGTTEDSLLPQKIQSFEG---VCVKMIAAGAEHTAAVTE 198
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ + +G G G LG G LVPE+V +
Sbjct: 199 --------DGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSV 230
>gi|440793979|gb|ELR15150.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 566
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/346 (26%), Positives = 130/346 (37%), Gaps = 89/346 (25%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ G + A + AG L+ WG G F P V G VV+ ACG
Sbjct: 183 IACGAAHTAAWNGAGVLYTWG----AGQGRLGHDHERDRFIPLEVSALGGKKVVQAACGY 238
Query: 137 EHVVALVSAGETY-----------KGEDLVC----------------------------- 156
H A+ AG Y G++ C
Sbjct: 239 AHTAAITDAGRVYTWGQGKGGVLGHGDESACSTPREVASLALQVIVVVIVVVVVAAVVAG 298
Query: 157 -----YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG N GQLG GDR R+ P ++ + ++ + C + L R+
Sbjct: 299 GSGTVYAWGGNEKGQLGFGDRTPRMSPALLADLS-----SISRIACTYLQSNLPVKRRHR 353
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
L WT+G G +GQLGHGT + LVP QV L Q V +++V G HT+ ++S G+
Sbjct: 354 ARQLMMRMWTWGDGASGQLGHGTEEEELVPRQVMALEQ-VNIIAVAAGKAHTAALTSQGE 412
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW+WG L A++ R P+LI + D
Sbjct: 413 VWTWGDGSDGQLGHGAAILRY-----CKPLLIES-----------------------LKD 444
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNT 377
G+ L++WG R G LG G A +V P E + ++
Sbjct: 445 SGH-LYAWGNSRRGALGGG-----LAEEVVSVPRAVEAMEGKKVKA 484
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 99/253 (39%), Gaps = 42/253 (16%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V G V +ACG+ H A AG V Y+WGA G+LG R
Sbjct: 169 PRVVEALLGKDVRGIACGAAHTAAWNGAG--------VLYTWGAGQ-GRLGHDHERDRFI 219
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + V + CG HTA +T R +T+G G+ G LGHG +
Sbjct: 220 PLEVSALGGKK---VVQAACGYAHTAAITDAGR--------VYTWGQGKGGVLGHGDESA 268
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKGLGLCPNASLTRNEAGD 296
P +V L V +V + + V +G V++WG EKG L +
Sbjct: 269 CSTPREVASLALQVIVVVIVVVVVAAVVAGGSGTVYAWGGNEKG-------QLGFGDRTP 321
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK-------LWSWGRGRSGVLGT 349
+SP L++ ++AC + L ++ +W+WG G SG LG
Sbjct: 322 RMSPALLA-------DLSSISRIACTYLQSNLPVKRRHRARQLMMRMWTWGDGASGQLGH 374
Query: 350 GKTIDFFAPAIVL 362
G + P V+
Sbjct: 375 GTEEEELVPRQVM 387
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 62/121 (51%), Gaps = 15/121 (12%)
Query: 161 ANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
+N+NG++G GD E P+++E +D V + CG+ HTA +
Sbjct: 152 SNDNGRVGHGDEEDHKVPRVVEALLGKD----VRGIACGAAHTAAWNG--------AGVL 199
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T+G G+ G+LGH + +P +V L +V CG HT+ ++ AG V++WG K
Sbjct: 200 YTWGAGQ-GRLGHDHERDRFIPLEVSALGGK-KVVQAACGYAHTAAITDAGRVYTWGQGK 257
Query: 280 G 280
G
Sbjct: 258 G 258
>gi|118349964|ref|XP_001008263.1| Regulator of chromosome condensation [Tetrahymena thermophila]
gi|89290030|gb|EAR88018.1| Regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 2290
Score = 106 bits (265), Expect = 2e-20, Method: Composition-based stats.
Identities = 73/245 (29%), Positives = 114/245 (46%), Gaps = 48/245 (19%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G + V+ + P+ + + ++VACGS H +AL G+ + +WG N GQL
Sbjct: 322 GNENFVNVYEPTELLVWPKRKFIQVACGSSHSMALTDNGQIF--------TWGKNTRGQL 373
Query: 168 GLGDRESRLRPK--IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
G G R +L+P IIE + G H+A ++ K +T+G G
Sbjct: 374 GQGHRNDQLKPTMIIIEVM-------ATSICSGDQHSAFISDEKE--------LYTWGNG 418
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+ +LGHG T L P++V L + VY+ V CG+ HT +++ G V++W
Sbjct: 419 QYFRLGHGVTTDELYPKKVVVL-EDVYVTHVSCGMTHTLAITNEGFVYAW---------- 467
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
GD +S L G + P +V+ G H++ +TD G L+SWG + G
Sbjct: 468 ---------GDGMSGKL--GVQENNKSLHLPTRVSAGGLHSMALTDQGI-LYSWGSSKGG 515
Query: 346 VLGTG 350
VLG G
Sbjct: 516 VLGIG 520
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 45/174 (25%), Positives = 80/174 (45%), Gaps = 27/174 (15%)
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
E +SL+ F P + + + ++ ++C H +A+ ++KG V YSWG+N Q
Sbjct: 771 EQNYSLIFDF-PFLI-PYFKNKIIFMSCSYTHAIAI-----SHKG---VAYSWGSNKYYQ 820
Query: 167 LGLGD--RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 224
LGLG + + + KI + TC +ALLT + WTFG
Sbjct: 821 LGLGYMCKYNHIPQKIQGALETKR---IIMSTCSDRFSALLTDKGE--------IWTFGT 869
Query: 225 GENGQLGHGTTQSALV--PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
++G LGH +V P+ + ++P ++L S G+ ++ +++WG
Sbjct: 870 SDSGVLGHDEKNYYVVSEPKMINDIPPMIFLASGPQGMM--AITEQKRQIYAWG 921
Score = 47.4 bits (111), Expect = 0.017, Method: Composition-based stats.
Identities = 35/145 (24%), Positives = 69/145 (47%), Gaps = 25/145 (17%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGM----------EKGLGLCPNASLTRNEAGDA-------I 298
V CG HT V++ G ++ +GM E L L + + + + G+
Sbjct: 273 VSCGHHHTLVITDQGTIFYFGMGTQGKLFLLRECQLLLQNKSKIQKGQLGNENFVNVYEP 332
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ +L+ PK + +QVACG++H++ +TD+G ++++WG+ G LG G D P
Sbjct: 333 TELLV------WPK-RKFIQVACGSSHSMALTDNG-QIFTWGKNTRGQLGQGHRNDQLKP 384
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDE 383
+++ + + ++ + DE
Sbjct: 385 TMIIIEVMATSICSGDQHSAFISDE 409
Score = 46.2 bits (108), Expect = 0.036, Method: Composition-based stats.
Identities = 44/212 (20%), Positives = 84/212 (39%), Gaps = 45/212 (21%)
Query: 173 ESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG------ 225
+S +R + +T N++ + V+CG HT ++T + + FG+G
Sbjct: 250 QSFVRSYVNKTEINEEIKDGIKHVSCGHHHTLVITD--------QGTIFYFGMGTQGKLF 301
Query: 226 ---------------ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ GQLG+ + P ++ P+ + + V CG H+ ++ G
Sbjct: 302 LLRECQLLLQNKSKIQKGQLGNENFVNVYEPTELLVWPKRKF-IQVACGSSHSMALTDNG 360
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+++WG L + D + P +I + G H+ ++
Sbjct: 361 QIFTWGKNT------RGQLGQGHRNDQLKPTMIIIE-------VMATSICSGDQHSAFIS 407
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
D+ +L++WG G+ LG G T D P V+
Sbjct: 408 DEK-ELYTWGNGQYFRLGHGVTTDELYPKKVV 438
>gi|405965978|gb|EKC31310.1| Putative E3 ubiquitin-protein ligase HERC2 [Crassostrea gigas]
Length = 5345
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/295 (29%), Positives = 135/295 (45%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG SLA+ G ++ WG D G FS + P + V
Sbjct: 3552 IKKVAVHSGGRHSLALTTDGKVFSWGEG---DDGKLGHFSRWNCDKPRLIEALKSKRVRD 3608
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S G+ Y+WG G+LG GD ++L+PK ++ +
Sbjct: 3609 IACGSSHSAAITSNGD--------LYTWGLGEYGRLGHGDNTTQLKPKQVKALAHER--- 3657
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E +++G G+ G+LG G ++ VP +V L
Sbjct: 3658 VVQVACGSRDAQTLALTD------EGKVYSWGDGDFGKLGRGGSEGCNVPHEVDRLRDQ- 3710
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG +A + + P ++
Sbjct: 3711 KVCQIECGAQFSLALTKSGQVWTWG--KGDYFRLGHGTDAHVRK--------PQIV---- 3756
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G K + V VA GA H + VTD G ++++WG G G G T PA+V+
Sbjct: 3757 -EGLKGKKIVHVAVGALHCLAVTDSG-QVFAWGDNDHGQQGNGTTTVNRKPALVV 3809
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 129/294 (43%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ G ++ WG + G + P + G VV
Sbjct: 4548 IKKLAVNSGGKHCLALSAEGEVYSWGEG---EDGKLGHGNRSPCDRPRVIDSLRGKEVVD 4604
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + + GE Y+WG G+LG GD E + RPK++E +
Sbjct: 4605 IAAGGAHSACITANGE--------LYTWGKGRYGRLGHGDSEDQPRPKLVEALKS---YR 4653
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ CGS L N W++G G+ G+LG G + VP +++ L Q
Sbjct: 4654 VVDMACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKVPMKIETL-QGQ 4706
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + + R A+
Sbjct: 4707 GVMKVECGSQFSVALTKSGSVYTWG--KGDYHRLGHGSDDHVRRPRKVSAL--------- 4755
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + + VACG+ H V TD G +++SWG G LG G T P +V
Sbjct: 4756 ----QNKKVIDVACGSLHCVACTDTG-EVFSWGDNDEGQLGDGTTNAIQRPRLV 4804
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 119/260 (45%), Gaps = 42/260 (16%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
G + + P + + + KVA G H +AL + G+ + SWG ++G+
Sbjct: 3532 GITTGTVSVPRQITSLSQYVIKKVAVHSGGRHSLALTTDGKVF--------SWGEGDDGK 3583
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG R + +P++IE V ++ CGS H+A +T D+ +T+GLGE
Sbjct: 3584 LGHFSRWNCDKPRLIEALKSKR---VRDIACGSSHSAAITSN---GDL-----YTWGLGE 3632
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLC 284
G+LGHG + L P+QVK L + +V V CG T ++ G V+SWG + G
Sbjct: 3633 YGRLGHGDNTTQLKPKQVKALA-HERVVQVACGSRDAQTLALTDEGKVYSWG-DGDFG-- 3688
Query: 285 PNASLTRNEAGDAISPILISGNGPHGP---KFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
L R + N PH + Q Q+ CGA ++ +T G ++W+WG+
Sbjct: 3689 ---KLGRGGSEGC--------NVPHEVDRLRDQKVCQIECGAQFSLALTKSG-QVWTWGK 3736
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G LG G P IV
Sbjct: 3737 GDYFRLGHGTDAHVRKPQIV 3756
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 125/290 (43%), Gaps = 34/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+I S G + + + G ++ WGN D G + P+ + G V K
Sbjct: 620 IRIAS-HPDGKHYMGLTSDGEVFSWGNG---DGGKLGHGDYQNHEEPALITGLSGKQVAK 675
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ CGS + VAL S GE YSWG N G+LG G E + P +++ F
Sbjct: 676 ICCGSSYSVALTSNGEV--------YSWGKGNFGRLGHGSSEDQTTPMLLKFFKGHR--- 724
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS L +++G G+ G+LG G P+ +++L
Sbjct: 725 IVDVACGSGDAQTLAVTD------SGAVYSWGDGDYGKLGRGGNDGCKTPKVIEKL-MGQ 777
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V V CG + ++ +G V++WG KG N L A P I
Sbjct: 778 DVVRVYCGNQFSMALTKSGAVYTWG--KG----DNYRLGHGTEDHARHPKQIEALS--SK 829
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K +D +A G+ H + +T+DG +L+ WGR G LG +F P ++
Sbjct: 830 KVKD---IAIGSLHCMAITEDG-ELYGWGRNEQGQLGNPSISNFTEPTLI 875
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 109/226 (48%), Gaps = 37/226 (16%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDS 188
V++ GS+ + + G+ Y + G NG+LGLG + P+ I + +Q
Sbjct: 3500 VQIVGGSKSLFCVTQEGKVY--------ACGEATNGRLGLGITTGTVSVPRQITSLSQYV 3551
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + G AL T K +++G G++G+LGH + + P ++ L
Sbjct: 3552 IKKVAVHSGGRHSLALTTDGK---------VFSWGEGDDGKLGHFSRWNCDKPRLIEAL- 3601
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGN 306
+ + + CG H++ ++S GD+++WG+ E G LG N + + + A++
Sbjct: 3602 KSKRVRDIACGSSHSAAITSNGDLYTWGLGEYGRLGHGDNTTQLKPKQVKALA------- 3654
Query: 307 GPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ VQVACG+ A T+ +TD+G K++SWG G G LG G
Sbjct: 3655 ------HERVVQVACGSRDAQTLALTDEG-KVYSWGDGDFGKLGRG 3693
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 22/142 (15%)
Query: 69 KAPIKICSVKAGGMM--------SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI +++ G+M S+A+ +G+++ WG D G S P
Sbjct: 4695 KVPMKIETLQGQGVMKVECGSQFSVALTKSGSVYTWGKG---DYHRLGHGSDDHVRRPRK 4751
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V V+ VACGS H VA GE + SWG N+ GQLG G + RP++
Sbjct: 4752 VSALQNKKVIDVACGSLHCVACTDTGEVF--------SWGDNDEGQLGDGTTNAIQRPRL 4803
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ + + V CGS H+
Sbjct: 4804 VASLLGKK---INRVACGSAHS 4822
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 83/192 (43%), Gaps = 23/192 (11%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ ++GA++ WG+ D G TP + G VV+V CG++
Sbjct: 732 SGDAQTLAVTDSGAVYSWGDG---DYGKLGRGGNDGCKTPKVIEKLMGQDVVRVYCGNQF 788
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL +G Y+WG +N +LG G + PK IE S V ++ G
Sbjct: 789 SMALTKSG--------AVYTWGKGDNYRLGHGTEDHARHPKQIEAL---SSKKVKDIAIG 837
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H +T + + +G E GQLG+ + + P + + + ++ V C
Sbjct: 838 SLHCMAITE--------DGELYGWGRNEQGQLGNPSISNFTEPTLIGGM-EGKNIIGVAC 888
Query: 259 GLFHTSVVSSAG 270
G T +S G
Sbjct: 889 GPTQTFAWTSGG 900
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 59/130 (45%), Gaps = 15/130 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+C ++ G SLA+ +G +W WG D G + P V G +V V
Sbjct: 3711 KVCQIECGAQFSLALTKSGQVWTWGKG---DYFRLGHGTDAHVRKPQIVEGLKGKKIVHV 3767
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G+ H +A+ +G+ ++WG N++GQ G G +P ++ + +
Sbjct: 3768 AVGALHCLAVTDSGQV--------FAWGDNDHGQQGNGTTTVNRKPALVVL----EGYKI 3815
Query: 193 YEVTCGSFHT 202
+V CGS H+
Sbjct: 3816 SKVACGSSHS 3825
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 96/209 (45%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ GQLG D +P E P + G T E
Sbjct: 4464 WGWGHNHRGQLGGVDGAKVKQPVSCEALAVTRPIQL----VGGEQTLFAV-------TAE 4512
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P Q++ + Q+V++ ++V+ G H +S+ G+V+S
Sbjct: 4513 GKVFATGYGAGGRLGVGGTESVSHPTQLESI-QHVFIKKLAVNSGGKHCLALSAEGEVYS 4571
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R D++ + ++ V +A G AH+ +T +
Sbjct: 4572 WGEGEDGKLGHGNRSPCDRPRVIDSL-------------RGKEVVDIAAGGAHSACITAN 4618
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L++WG+GR G LG G + D P +V
Sbjct: 4619 G-ELYTWGKGRYGRLGHGDSEDQPRPKLV 4646
>gi|115458498|ref|NP_001052849.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|32487442|emb|CAE02741.1| OSJNBa0006B20.1 [Oryza sativa Japonica Group]
gi|113564420|dbj|BAF14763.1| Os04g0435700 [Oryza sativa Japonica Group]
gi|125548381|gb|EAY94203.1| hypothetical protein OsI_15977 [Oryza sativa Indica Group]
gi|125590466|gb|EAZ30816.1| hypothetical protein OsJ_14886 [Oryza sativa Japonica Group]
gi|215704772|dbj|BAG94800.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 453
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 79/236 (33%), Positives = 113/236 (47%), Gaps = 33/236 (13%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV V+ G+ H VAL++ +++C SWG +GQLG GD E RL P ++ F+
Sbjct: 23 AVVLVSAGASHSVALLAG-------NVLC-SWGRGEDGQLGHGDAEDRLVPTVLSGFDAA 74
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+P + V CG+ HT + E +++G G+ G+LGHG + P+ VK L
Sbjct: 75 AP-GITSVICGADHTTAYSED-------EQQVYSWGWGDFGRLGHGNSSDVFTPQPVKAL 126
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q + + + CG H V+ AG+V SWG + N L D++ P I
Sbjct: 127 -QGIKIKQIACGDSHCLAVTMAGEVQSWGRNQ------NGQLGLGTTEDSLLPQKIQ--- 176
Query: 308 PHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 177 ----SFEGVCVKMIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRLVPEKV 227
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 129/293 (44%), Gaps = 41/293 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IKI + G LA+ AG + WG N L +TE S P + F G
Sbjct: 129 IKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTE------DSLLPQKIQSFEGVC 182
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 183 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRNDRLVPEKVSSVEGEK 234
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + CG HT ++ +T+G + GQLGHG + LVP +++ L
Sbjct: 235 ---MVLIACGWRHTITVSS--------SGSLYTYGWSKYGQLGHGDFEDHLVPHKLEALK 283
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + G HT ++S G ++ WG K + + D P+ +
Sbjct: 284 DS-SISQISGGWRHTMALTSDGKLYGWGWNK------FGQVGVGDTDDHCFPVQVKF--- 333
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P+ Q QVACG HT+ T+ ++SWGRG SG LG G+ +D P ++
Sbjct: 334 --PEDQKVAQVACGWRHTLAFTEK-KNVFSWGRGTSGQLGHGEIVDRNKPVMI 383
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACG H +A E +SWG +GQLG G+ R +P +I+ + D
Sbjct: 339 VAQVACGWRHTLAFT--------EKKNVFSWGRGTSGQLGHGEIVDRNKPVMIDALSPDG 390
Query: 189 P 189
P
Sbjct: 391 P 391
>gi|195622006|gb|ACG32833.1| HECT domain and RCC1-like domain-containing protein 2 [Zea mays]
Length = 353
Score = 106 bits (265), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 115/237 (48%), Gaps = 35/237 (14%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TVV V+ G+ H VAL++ +++C SWG +GQLG GD E RL P ++ F
Sbjct: 13 QTVVLVSAGASHSVALLTG-------NVLC-SWGRGEDGQLGHGDAEDRLVPTVLSGF-- 62
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D+P A+ V CG+ HT + D L+ W G G+ G+LGHG + P+ VK
Sbjct: 63 DAP-AITSVICGADHTTAYS-----EDELQVYSW--GWGDFGRLGHGNSSDVFTPQPVKA 114
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q + + + CG H V+ AG+V SWG + N L D++ P I
Sbjct: 115 L-QGLKIKQIACGDSHCLAVTMAGEVQSWGRNQ------NGQLGLGTTEDSLLPQKIQ-- 165
Query: 307 GPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 166 -----AFESVCVKMIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRLLPEKV 216
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 115/249 (46%), Gaps = 32/249 (12%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
FTP PV G + ++ACG H +A+ AGE SWG N NGQLGLG E
Sbjct: 107 FTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQ--------SWGRNQNGQLGLGTTEDS 158
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P+ I+ F V + G+ HTA +T + + +G G G LG G
Sbjct: 159 LLPQKIQAFESV---CVKMIAAGAEHTAAVTE--------DGDLYGWGWGRYGNLGLGDR 207
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
L+PE+V + + +V V CG HT VS +G+++++G K L +
Sbjct: 208 NDRLLPEKVSSV-EGEKMVLVACGWRHTITVSDSGNLYTYGWSK------YGQLGHGDFE 260
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
D + P + K Q++ G HT+ +T +G KL+ WG + G +G G D
Sbjct: 261 DHLVPHKVE-----ALKDSTISQISGGWRHTMALTSEG-KLYGWGWNKFGQVGVGNNDDH 314
Query: 356 FAPAIVLWP 364
+P V +P
Sbjct: 315 SSPGQVSFP 323
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + V AG S+A+ L WG + G P+ + F +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNVLCSWGR---GEDGQLGHGDAEDRLVPTVLSGFDAPAIT 68
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H A Y ++L YSWG + G+LG G+ P+ ++
Sbjct: 69 SVICGADHTTA-------YSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQG---L 118
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T + ++G +NGQLG GTT+ +L+P++++ +
Sbjct: 119 KIKQIACGDSHCLAVT--------MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF-ES 169
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + G HT+ V+ GD+ W WG LGL + D + P +S
Sbjct: 170 VCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRNDRLLPEKVS--SV 219
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VACG HT+ V+D G L+++G + G LG G D P V
Sbjct: 220 EGEKM---VLVACGWRHTITVSDSG-NLYTYGWSKYGQLGHGDFEDHLVPHKV 268
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 29/211 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+KI + G LA+ AG + WG N L +TE S P + F
Sbjct: 118 LKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTE------DSLLPQKIQAFESVC 171
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 172 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEK 223
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +V+ L
Sbjct: 224 ---MVLVACGWRHTITVSDSGN--------LYTYGWSKYGQLGHGDFEDHLVPHKVEALK 272
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ + G HT ++S G ++ WG K
Sbjct: 273 DST-ISQISGGWRHTMALTSEGKLYGWGWNK 302
>gi|326507328|dbj|BAJ95741.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 343
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 109/351 (31%), Positives = 150/351 (42%), Gaps = 62/351 (17%)
Query: 32 DGQLGFS-GSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI--- 87
DGQLG + LVP VI F AP I SV G + A
Sbjct: 43 DGQLGHGDAEDRLVPTVISGF-----------------DAP-GITSVICGADHTTAYSED 84
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
++ W WG D G + FTP PV G + ++ACG H +A+ AGE
Sbjct: 85 EHQVYSWGWG-----DFGRLGHGNSTDVFTPQPVKALQGIKIKQLACGDSHCLAVTMAGE 139
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
SWG N NGQLGLG E L P+ I+ F S V + G+ HTA +T
Sbjct: 140 VL--------SWGRNQNGQLGLGTTEDSLLPQTIQAFEGIS---VKMIAAGAEHTAAVTE 188
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ + +G G G LG G VPE+V + + +V V CG HT VS
Sbjct: 189 --------DGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSV-EGDKMVLVACGWRHTITVS 239
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
S+G ++++G K L + D + P + K Q++ G HT+
Sbjct: 240 SSGSLYTYGWSK------YGQLGHGDFEDHLVPHKVE-----ALKDSSTSQISGGWRHTM 288
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 378
+T DG KL+ WG + G +G G D +PA V +P EE K ++ G
Sbjct: 289 ALTSDG-KLYGWGWNKFGQVGAGDNADHCSPAQVNFP---EEQKVAQVACG 335
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 80/233 (34%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV V+ G+ H VAL++ +++C +WG +GQLG GD E RL P +I F D+
Sbjct: 16 VVLVSAGASHSVALLAG-------NVLC-TWGRGEDGQLGHGDAEDRLVPTVISGF--DA 65
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P + V CG+ HT + E +++G G+ G+LGHG + P+ VK L
Sbjct: 66 P-GITSVICGADHTTAYSED-------EHQVYSWGWGDFGRLGHGNSTDVFTPQPVKAL- 116
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG H V+ AG+V SWG + N L D++ P I
Sbjct: 117 QGIKIKQLACGDSHCLAVTMAGEVLSWGRNQ------NGQLGLGTTEDSLLPQTIQAFEG 170
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K +A GA HT VT+DG ++ WG GR G LG G D F P V
Sbjct: 171 ISVKM-----IAAGAEHTAAVTEDG-DIYGWGWGRYGNLGLGDRNDRFVPEKV 217
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/262 (29%), Positives = 110/262 (41%), Gaps = 40/262 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IKI + G LA+ AG + WG N L +TE S P + F G +
Sbjct: 119 IKIKQLACGDSHCLAVTMAGEVLSWGRNQNGQLGLGTTE------DSLLPQTIQAFEGIS 172
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR R P+ + + D
Sbjct: 173 VKMIAAGAEHTAAVT--------EDGDIYGWGWGRYGNLGLGDRNDRFVPEKVSSVEGDK 224
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +V+ L
Sbjct: 225 ---MVLVACGWRHTITVSS--------SGSLYTYGWSKYGQLGHGDFEDHLVPHKVEALK 273
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ G HT ++S G ++ WG K + + D SP ++
Sbjct: 274 DS-STSQISGGWRHTMALTSDGKLYGWGWNK------FGQVGAGDNADHCSPAQVNF--- 323
Query: 309 HGPKFQDPVQVACGAAHTVLVT 330
P+ Q QVACG HT+ T
Sbjct: 324 --PEEQKVAQVACGWRHTLAFT 343
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 57/126 (45%), Gaps = 17/126 (13%)
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
A + E P V LVS G H+ + + + +WG + + L +A D
Sbjct: 3 AALSAVADEAPPAVVLVS--AGASHSVALLAGNVLCTWGRGE------DGQLGHGDAEDR 54
Query: 298 ISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P +ISG F P V CGA HT ++D ++++SWG G G LG G + D
Sbjct: 55 LVPTVISG-------FDAPGITSVICGADHTTAYSEDEHQVYSWGWGDFGRLGHGNSTDV 107
Query: 356 FAPAIV 361
F P V
Sbjct: 108 FTPQPV 113
>gi|91202557|emb|CAJ72196.1| hypothetical protein kustd1451 [Candidatus Kuenenia
stuttgartiensis]
Length = 1413
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 137/312 (43%), Gaps = 57/312 (18%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D+S TN P+++ ++ G ++A+ + G +W WGN L D ST
Sbjct: 175 LGDESTTNRSTPVQVSGLTDVIAIAGGAYHTIALKSDGTVWAWGNNEGGQLGDGSTT--- 231
Query: 111 SLVSSFTPSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
TP V G T V+ +A G H +AL S D ++WG N G+LG
Sbjct: 232 ---DRSTPVQV---SGLTDVIAIAGGYAHTIALKS--------DGTVWAWGDNEGGRLGD 277
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G +R P + + V + G+ HT L + W +G E GQ
Sbjct: 278 GSTTNRSIPVKVGGLSD-----VIAIAGGNAHTIALKS--------DGTVWAWGDNEGGQ 324
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG G+T + P +V L ++++ G HT V+ S G VW+WG +G L ++
Sbjct: 325 LGDGSTTNRSTPVKVSGLAD---VIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTT 381
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
R+ +P+ +SG D + +A G HT+ V DG +W+WG G LG
Sbjct: 382 NRS------TPVQVSG-------LADVIAIAGGVYHTIAVKSDG-TMWAWGYNWYGQLGD 427
Query: 350 GKTIDFFAPAIV 361
G TI+ P V
Sbjct: 428 GTTINSSTPVQV 439
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 126/289 (43%), Gaps = 51/289 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVKV 132
+ AG +L + GA+W WG N L D ST + TP V G T V+ +
Sbjct: 148 ISAGAYHTLTLKPDGAVWTWGANWNGQLGDEST------TNRSTPVQV---SGLTDVIAI 198
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G+ H +AL S D ++WG N GQLG G R P + V
Sbjct: 199 AGGAYHTIALKS--------DGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD-----V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G HT L + W +G E G+LG G+T + +P +V L
Sbjct: 246 IAIAGGYAHTIALKS--------DGTVWAWGDNEGGRLGDGSTTNRSIPVKVGGLSD--- 294
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++++ G HT + S G VW+WG +G L ++ R+ +P+ +SG
Sbjct: 295 VIAIAGGNAHTIALKSDGTVWAWGDNEGGQLGDGSTTNRS------TPVKVSG------- 341
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + +A G +HT+++ DG +W+WG G LG G T + P V
Sbjct: 342 LADVIAIAGGYSHTIVLRSDG-TVWTWGHNEGGQLGDGSTTNRSTPVQV 389
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 133/313 (42%), Gaps = 63/313 (20%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L D S T+ P+++ ++ G ++A+ + G +W WG+ L D ST
Sbjct: 225 LGDGSTTDRSTPVQVSGLTDVIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTT--- 281
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ P V V+ +A G+ H +AL S D ++WG N GQLG G
Sbjct: 282 ---NRSIPVKVGGLS--DVIAIAGGNAHTIALKS--------DGTVWAWGDNEGGQLGDG 328
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+R P + V + G HT +L + WT+G E GQL
Sbjct: 329 STTNRSTPVKVSGLAD-----VIAIAGGYSHTIVLRS--------DGTVWTWGHNEGGQL 375
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPN 286
G G+T + P QV L ++++ G++HT V S G +W+WG + G G N
Sbjct: 376 GDGSTTNRSTPVQVSGLAD---VIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTTIN 432
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
+S +P+ ++G D + +A G HT+ + DG +W+WG G
Sbjct: 433 SS----------TPVQVNG-------LTDVIAIAGGYYHTIAMKSDG-AVWTWGFNYYGQ 474
Query: 347 LGTGKTIDFFAPA 359
LG G + PA
Sbjct: 475 LGDGSITNRSTPA 487
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 133/309 (43%), Gaps = 49/309 (15%)
Query: 60 LEDDSKTNHKAPIKICSVK-----AGGMM-SLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S T+ P+++ + AGG+ ++A+ + G +W WG +S G + +
Sbjct: 623 LGDGSTTDSSTPVQVSGLTDAIAIAGGVYHTIALKSDGTVWTWG---WNNSGQLGDGTTI 679
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ TP V V+ +A G H +AL S D ++WG N GQLG G
Sbjct: 680 NRSTPVQVIGLT--DVIAIAGGDYHTIALKS--------DGTVWTWGFNYYGQLGGGATT 729
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P ++ + + G H+ L + W +G GQLG G
Sbjct: 730 NRSTPVQVKGLAD-----IIAIAGGYVHSIALKS--------DGTVWAWGYNGYGQLGDG 776
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T L P QV L ++++ G HT + S G VW+WG +G G + + T +
Sbjct: 777 STTDHLTPVQVSGLTD---IIAIAGGYIHTIALKSDGTVWAWGHNEG-GQLGDGTTTNSS 832
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+P+ +SG D + V HT+ + DG +W+WGR G LG G T
Sbjct: 833 -----TPVQVSG-------LTDVIAVTARLYHTIALKSDG-TVWTWGRNIYGQLGDGSTT 879
Query: 354 DFFAPAIVL 362
+ P V+
Sbjct: 880 ERSLPVQVI 888
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 126/308 (40%), Gaps = 49/308 (15%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + N P+++ ++ G ++A+ + +W WG+ G ++
Sbjct: 1071 LGDGTTINRSTPVQVSGLTDVIAIAGGDYHTIALKSDNTVWAWGSNSYGQ---LGDGTIT 1127
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ P+PV + ++ +A G H +AL S D ++WG N GQLG G
Sbjct: 1128 NRSIPTPV--TYLTNIIAIAGGYVHTIALKS--------DGTVWAWGYNGYGQLGDGSTT 1177
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P + V + HT L + W +G GQLG G
Sbjct: 1178 NRSTPVQVSGLTD-----VIAIAGEYVHTVALKS--------DGTVWAWGYNGYGQLGDG 1224
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P QV L ++++ G HT + S G VW+WG L ++ R
Sbjct: 1225 STTNRSTPVQVSGLTD---VIAIAGGYVHTIALKSDGTVWTWGWNNSGQLGDGTTINR-- 1279
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
++P+ +SG D + +A G HT+ + D +W+WG G LG G TI
Sbjct: 1280 ----LTPVQVSG-------LTDAIAIAGGDYHTIALKSDN-TVWAWGSNSYGQLGDGTTI 1327
Query: 354 DFFAPAIV 361
+ P V
Sbjct: 1328 NRLTPVQV 1335
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 132/328 (40%), Gaps = 57/328 (17%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + TN P I ++ G + ++A+ + G +W WG L D ST
Sbjct: 1121 LGDGTITNRSIPTPVTYLTNIIAIAGGYVHTIALKSDGTVWAWGYNGYGQLGDGSTT--- 1177
Query: 111 SLVSSFTPSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ TP V G T V+ +A H VAL S D ++WG N GQLG
Sbjct: 1178 ---NRSTPVQV---SGLTDVIAIAGEYVHTVALKS--------DGTVWAWGYNGYGQLGD 1223
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G +R P + V + G HT L + WT+G +GQ
Sbjct: 1224 GSTTNRSTPVQVSGLTD-----VIAIAGGYVHTIALKS--------DGTVWTWGWNNSGQ 1270
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GTT + L P QV L +++ G +HT + S VW+WG L ++
Sbjct: 1271 LGDGTTINRLTPVQVSGLTD---AIAIAGGDYHTIALKSDNTVWAWGSNSYGQLGDGTTI 1327
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
R ++P+ +SG D + +A G HT+ + D +W+WG G LG
Sbjct: 1328 NR------LTPVQVSG-------LTDAIAIAGGDYHTIALKSDN-TVWAWGSNSYGQLGD 1373
Query: 350 GKTIDFFAPAIVLWPPLTEEFKQDELNT 377
T + PA L P+ + T
Sbjct: 1374 VSTANSLTPAQCLLSPIVSTGTAINIGT 1401
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/289 (28%), Positives = 122/289 (42%), Gaps = 51/289 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVKV 132
+ AG +L + G +W G N L D +T ++ TP V G T V+ +
Sbjct: 1044 ISAGAYHTLTLKPDGTVWACGANWNGQLGDGTT------INRSTPVQV---SGLTDVIAI 1094
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G H +AL S D ++WG+N+ GQLG G +R P + +
Sbjct: 1095 AGGDYHTIALKS--------DNTVWAWGSNSYGQLGDGTITNRSIPTPVTYLTN-----I 1141
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G HT L + W +G GQLG G+T + P QV L
Sbjct: 1142 IAIAGGYVHTIALKS--------DGTVWAWGYNGYGQLGDGSTTNRSTPVQVSGLTD--- 1190
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++++ HT + S G VW+WG G G + S T +P+ +SG
Sbjct: 1191 VIAIAGEYVHTVALKSDGTVWAWGYN-GYGQLGDGSTTNRS-----TPVQVSG------- 1237
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + +A G HT+ + DG +W+WG SG LG G TI+ P V
Sbjct: 1238 LTDVIAIAGGYVHTIALKSDG-TVWTWGWNNSGQLGDGTTINRLTPVQV 1285
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 122/305 (40%), Gaps = 49/305 (16%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + N P+++ ++ G ++A+ + G +W WG GG +
Sbjct: 673 LGDGTTINRSTPVQVIGLTDVIAIAGGDYHTIALKSDGTVWTWG---FNYYGQLGGGATT 729
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ TP V ++ +A G H +AL S D ++WG N GQLG G
Sbjct: 730 NRSTPVQVKGLA--DIIAIAGGYVHSIALKS--------DGTVWAWGYNGYGQLGDGSTT 779
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
L P + + + G HT L + W +G E GQLG G
Sbjct: 780 DHLTPVQVSGLTD-----IIAIAGGYIHTIALKS--------DGTVWAWGHNEGGQLGDG 826
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT ++ P QV L +++V L+HT + S G VW+WG G + S T
Sbjct: 827 TTTNSSTPVQVSGLTD---VIAVTARLYHTIALKSDGTVWTWGRNI-YGQLGDGSTTERS 882
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
P+ + G D + +A G HT+ + DG +W+WG + LG T
Sbjct: 883 L-----PVQVIG-------LTDVIAIAGGYYHTIALKSDG-AVWAWGYNGNNQLGNWSTK 929
Query: 354 DFFAP 358
+ P
Sbjct: 930 NSSTP 934
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 99/231 (42%), Gaps = 38/231 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++ G+ H + L D ++WGAN NGQLG +R P +
Sbjct: 147 QISAGAYHTLTLK--------PDGAVWTWGANWNGQLGDESTTNRSTPVQVSGLTD---- 194
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + G++HT L + W +G E GQLG G+T P QV L
Sbjct: 195 -VIAIAGGAYHTIALKS--------DGTVWAWGNNEGGQLGDGSTTDRSTPVQVSGLTD- 244
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++++ G HT + S G VW+WG +G L ++ R+ P+ + G
Sbjct: 245 --VIAIAGGYAHTIALKSDGTVWAWGDNEGGRLGDGSTTNRSI------PVKVGG----- 291
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + +A G AHT+ + DG +W+WG G LG G T + P V
Sbjct: 292 --LSDVIAIAGGNAHTIALKSDG-TVWAWGDNEGGQLGDGSTTNRSTPVKV 339
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 38/232 (16%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+++ G+ H + L D +++GAN N QLG G P +
Sbjct: 594 TQISAGAYHTLTLK--------PDGTVWAYGANWNSQLGDGSTTDSSTPVQVSGLTD--- 642
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ G +HT L + WT+G +GQLG GTT + P QV L
Sbjct: 643 --AIAIAGGVYHTIALKS--------DGTVWTWGWNNSGQLGDGTTINRSTPVQVIGLTD 692
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++++ G +HT + S G VW+WG L A+ R+ +P+ + G
Sbjct: 693 ---VIAIAGGDYHTIALKSDGTVWTWGFNYYGQLGGGATTNRS------TPVQVKG---- 739
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + +A G H++ + DG +W+WG G LG G T D P V
Sbjct: 740 ---LADIIAIAGGYVHSIALKSDG-TVWAWGYNGYGQLGDGSTTDHLTPVQV 787
Score = 72.4 bits (176), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 90/350 (25%), Positives = 138/350 (39%), Gaps = 83/350 (23%)
Query: 60 LEDDSKTNHKAPIKICSVK-----AGGMM-SLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D S TN P+++ + AGG+ ++A+ + G +W WG L D +T
Sbjct: 375 LGDGSTTNRSTPVQVSGLADVIAIAGGVYHTIAVKSDGTMWAWGYNWYGQLGDGTT---- 430
Query: 111 SLVSSFTPSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
++S TP V +G T V+ +A G H +A+ S D ++WG N GQLG
Sbjct: 431 --INSSTPVQV---NGLTDVIAIAGGYYHTIAMKS--------DGAVWTWGFNYYGQLGD 477
Query: 170 GDRESRLRP--------KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
G +R P K + T + TC S +ALL N + + +
Sbjct: 478 GSITNRSTPAQRSLSGMKSVATPTVTTG----SATCVSLSSALLNGWVNGNGVATTAWFD 533
Query: 222 FGLGENGQLGHGT------TQSALVPEQVKEL-PQYVYL--------------------- 253
+G G T T S V + +L P Y
Sbjct: 534 YGT-STGMYFDATKTISCGTGSTYVGATLGDLTPWTTYYCRIASQNIGGIYYGSETTFMP 592
Query: 254 -VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ G +HT + G VW++G N+ L D+ +P+ +SG
Sbjct: 593 RTQISAGAYHTLTLKPDGTVWAYGANW------NSQLGDGSTTDSSTPVQVSG------- 639
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
D + +A G HT+ + DG +W+WG SG LG G TI+ P V+
Sbjct: 640 LTDAIAIAGGVYHTIALKSDG-TVWTWGWNNSGQLGDGTTINRSTPVQVI 688
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 80/341 (23%), Positives = 129/341 (37%), Gaps = 67/341 (19%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S T P+++ ++ G ++A+ + GA+W WG ++ G +S
Sbjct: 873 LGDGSTTERSLPVQVIGLTDVIAIAGGYYHTIALKSDGAVWAWG---YNGNNQLGNWSTK 929
Query: 114 SSFTP--SPVWDFHGHTVVKVACGSEHVVALVSA--GETYKGEDLVCYSWGANNNGQLGL 169
+S TP S +D + T V GS V+L S G +W
Sbjct: 930 NSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNGWVDGNRAATTAWFDYGTSSGVY 989
Query: 170 GDRESRL-----RPKIIETFNQDSPWAVY------------------------EVTCGSF 200
D + + I T +PW Y +++ G++
Sbjct: 990 FDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRGISYGSETIFLPRSQISAGAY 1049
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
HT L +P + W G NGQLG GTT + P QV L ++++ G
Sbjct: 1050 HTLTL----KP----DGTVWACGANWNGQLGDGTTINRSTPVQVSGLTD---VIAIAGGD 1098
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+HT + S VW+WG G + ++T P ++ + + +A
Sbjct: 1099 YHTIALKSDNTVWAWGSNS-YGQLGDGTITNRSI-----PTPVT-------YLTNIIAIA 1145
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT+ + DG +W+WG G LG G T + P V
Sbjct: 1146 GGYVHTIALKSDG-TVWAWGYNGYGQLGDGSTTNRSTPVQV 1185
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 75/193 (38%), Gaps = 38/193 (19%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D S TN P+K+ ++ G ++ + + G +W WG+ L D ST
Sbjct: 325 LGDGSTTNRSTPVKVSGLADVIAIAGGYSHTIVLRSDGTVWTWGHNEGGQLGDGSTT--- 381
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ TP V V+ +A G H +A+ S D ++WG N GQLG G
Sbjct: 382 ---NRSTPVQVSGLA--DVIAIAGGVYHTIAVKS--------DGTMWAWGYNWYGQLGDG 428
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ P + V + G +HT + + WT+G GQL
Sbjct: 429 TTINSSTPVQVNGLTD-----VIAIAGGYYHTIAMKS--------DGAVWTWGFNYYGQL 475
Query: 231 GHGTTQSALVPEQ 243
G G+ + P Q
Sbjct: 476 GDGSITNRSTPAQ 488
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 78/344 (22%), Positives = 126/344 (36%), Gaps = 73/344 (21%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + TN P+++ +V A ++A+ + G +W WG L D ST
Sbjct: 823 LGDGTTTNSSTPVQVSGLTDVIAVTARLYHTIALKSDGTVWTWGRNIYGQLGDGST---- 878
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ PV V+ +A G H +AL S D ++WG N N QLG
Sbjct: 879 ----TERSLPVQVIGLTDVIAIAGGYYHTIALKS--------DGAVWAWGYNGNNQLGNW 926
Query: 171 DRESRLRPKIIETFNQDS---PWAVY-EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
++ P ++ +S P + TC S + LL N + + +G
Sbjct: 927 STKNSSTPVRSLRYDMNSVTTPAVITGSTTCVSLSSVLLNGWVDGNRAATTAWFDYGT-S 985
Query: 227 NGQLGHGT------TQSALVPEQVKELP---QYVYLVS--------------------VD 257
+G T T SA + + L Y Y ++ +
Sbjct: 986 SGVYFDTTATIPCGTSSAYISATLGSLTPWTTYYYRIAAQNSRGISYGSETIFLPRSQIS 1045
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
G +HT + G VW+ G L ++ R+ +P+ +SG D +
Sbjct: 1046 AGAYHTLTLKPDGTVWACGANWNGQLGDGTTINRS------TPVQVSG-------LTDVI 1092
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G HT+ + D +W+WG G LG G + P V
Sbjct: 1093 AIAGGDYHTIALKSDN-TVWAWGSNSYGQLGDGTITNRSIPTPV 1135
>gi|168008673|ref|XP_001757031.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691902|gb|EDQ78262.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 420
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 94/291 (32%), Positives = 126/291 (43%), Gaps = 43/291 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LAI G + WG N L TE P+ V F G
Sbjct: 119 LEIKQIACGDSHCLAITGDGEVHSWGRNQNGQLGLGHTE------DVLVPNKVAAFEGIA 172
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ +G+ Y WG G LGLGDR RL P + +
Sbjct: 173 VKMLAAGAEHTAAVTESGK--------LYGWGWGRYGNLGLGDRNDRLVPGEVAAVPGEK 224
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT + + +TFG + GQLGHG + LVP QV+ L
Sbjct: 225 ---MNLVACGWRHTIAVAN--------SGNLYTFGWSKYGQLGHGDFEDHLVPHQVQALK 273
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-GLGLCPNASLTRNEAGDAISPILISGNG 307
+ +V G HT + G+++ WG K G C N D SP LI+G
Sbjct: 274 NKT-IQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTD-------DHNSPKLITG-- 323
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ +V CG HTV +TD G ++SWGRG SG LG G +D P
Sbjct: 324 ---IVNEKVTRVTCGWRHTVAITDRG-NVYSWGRGTSGQLGHGDAVDRCVP 370
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 109/237 (45%), Gaps = 31/237 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ V+ G+ H VAL+S DLVC SWG +GQLG GD E R P +I +
Sbjct: 16 VISVSAGASHTVALLSG-------DLVC-SWGRGEDGQLGHGDAEERHLPLVISALDDCE 67
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +TCG+ HT + R +++G G+ G+LGHG + +P +K L
Sbjct: 68 ---ISSITCGADHTTARSESTR-------TVYSWGWGDFGRLGHGNSSDLFIPRAIKGL- 116
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + + CG H ++ G+V SWG + N L D + P ++
Sbjct: 117 KGLEIKQIACGDSHCLAITGDGEVHSWGRNQ------NGQLGLGHTEDVLVPNKVAAFEG 170
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
K +A GA HT VT+ G KL+ WG GR G LG G D P V P
Sbjct: 171 IAVKM-----LAAGAEHTAAVTESG-KLYGWGWGRYGNLGLGDRNDRLVPGEVAAVP 221
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 74/175 (42%), Gaps = 22/175 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++A+ N+G L+ +G G P V T+ V
Sbjct: 224 KMNLVACGWRHTIAVANSGNLYTFG---WSKYGQLGHGDFEDHLVPHQVQALKNKTIQAV 280
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H VAL GE Y WG N GQ+G G+ + PK+I + V
Sbjct: 281 SGGWRHTVALDEDGE--------LYGWGWNKFGQVGCGNTDDHNSPKLITGIVNEK---V 329
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
VTCG HT +T R +++G G +GQLGHG VP++++ L
Sbjct: 330 TRVTCGWRHTVAITDRGN--------VYSWGRGTSGQLGHGDAVDRCVPKRIELL 376
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 47/121 (38%), Gaps = 25/121 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG-------NCPLPDSSTEGGFSLVSSFTPSPVWDFHG 126
I +V G ++A+D G L+ WG C D +P +
Sbjct: 277 IQAVSGGWRHTVALDEDGELYGWGWNKFGQVGCGNTDDHN----------SPKLITGIVN 326
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V +V CG H VA+ G Y SWG +GQLG GD R PK IE +
Sbjct: 327 EKVTRVTCGWRHTVAITDRGNVY--------SWGRGTSGQLGHGDAVDRCVPKRIELLSA 378
Query: 187 D 187
D
Sbjct: 379 D 379
>gi|226495309|ref|NP_001141147.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
gi|194702882|gb|ACF85525.1| unknown [Zea mays]
gi|224030327|gb|ACN34239.1| unknown [Zea mays]
gi|414587150|tpg|DAA37721.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 443
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 115/237 (48%), Gaps = 35/237 (14%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TVV V+ G+ H VAL++ +++C SWG +GQLG GD E RL P ++ F
Sbjct: 13 QTVVLVSAGASHSVALLTG-------NVLC-SWGRGEDGQLGHGDAEDRLVPTVLSGF-- 62
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D+P A+ V CG+ HT + D L+ W G G+ G+LGHG + P+ VK
Sbjct: 63 DAP-AITSVICGADHTTAYSE-----DELQVYSW--GWGDFGRLGHGNSSDVFTPQPVKA 114
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q + + + CG H V+ AG+V SWG + N L D++ P I
Sbjct: 115 L-QGLKIKQIACGDSHCLAVTMAGEVQSWGRNQ------NGQLGLGTTEDSLLPQKIQ-- 165
Query: 307 GPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 166 -----AFESVCVKMIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRLLPEKV 216
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/293 (30%), Positives = 131/293 (44%), Gaps = 41/293 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+KI + G LA+ AG + WG N L +TE S P + F
Sbjct: 118 LKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTE------DSLLPQKIQAFESVC 171
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 172 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRNDRLLPEKVSSVEGEK 223
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +V+ L
Sbjct: 224 ---MVLVACGWRHTITVSDSGN--------LYTYGWSKYGQLGHGDFEDHLVPHKVEALK 272
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + G HT ++S G ++ WG K + N+ D SP +S
Sbjct: 273 DST-ISQISGGWRHTMALTSEGKLYGWGWNK----FGQVGVGNND--DHSSPGQVSF--- 322
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P+ Q QVACG HT+ +++ ++SWGRG SG LG G+ +D P ++
Sbjct: 323 --PEDQKISQVACGWRHTLALSEK-KNVFSWGRGTSGQLGNGEIVDRNTPVLI 372
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 127/293 (43%), Gaps = 38/293 (12%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + V AG S+A+ L WG + G P+ + F +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNVLCSWGRG---EDGQLGHGDAEDRLVPTVLSGFDAPAIT 68
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H A Y ++L YSWG + G+LG G+ P+ ++
Sbjct: 69 SVICGADHTTA-------YSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQG---L 118
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T + ++G +NGQLG GTT+ +L+P++++ +
Sbjct: 119 KIKQIACGDSHCLAVT--------MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF-ES 169
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + G HT+ V+ GD+ W WG LGL + D + P +S
Sbjct: 170 VCVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRNDRLLPEKVS--SV 219
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VACG HT+ V+D G L+++G + G LG G D P V
Sbjct: 220 EGEKM---VLVACGWRHTITVSDSG-NLYTYGWSKYGQLGHGDFEDHLVPHKV 268
>gi|307176782|gb|EFN66182.1| Probable E3 ubiquitin-protein ligase HERC2 [Camponotus floridanus]
Length = 4802
Score = 106 bits (264), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S ++P ++E IK +V +GG LA+ + G
Sbjct: 4006 GRLGIGGTDSVMIPTLLESI----------------QHVFIKKVAVSSGGKHCLALSSEG 4049
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + +S P + D G ++ +ACG H A+ SAG
Sbjct: 4050 HVYSWGE---GDDGKLGHGNKMSYDRPKLIEDLLGVEIIDIACGGHHSAAITSAG----- 4101
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD + +LRPK++E QD + V +V CGS L
Sbjct: 4102 ---WLYTWGKGRYGRLGHGDSDDQLRPKVVEAL-QD--YKVIDVACGSGDAQTLCVTDDD 4155
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + VP ++ L + ++ V+CG + ++ +G
Sbjct: 4156 N------VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAG-LGVIKVECGSQFSVALTRSGA 4208
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4209 VYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4253
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+D G ++++WG G LG G T P +V
Sbjct: 4254 ACSDKG-EVFTWGDNDEGQLGDGTTSALHRPRLV 4286
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 131/292 (44%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + +S P + +
Sbjct: 3048 IKKVAVHSGGKHALALTQDGKVFSWGE---GEDGKLGHGNNMSLDKPKLIETLKSKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S GE Y+WG G+LG GD ++ RPK+++T
Sbjct: 3105 IACGSGHSAAIASNGE--------LYTWGLGEYGRLGHGDTVTQARPKLVQTLVGHR--- 3153
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + +++G G+ G+LG G + P V+ L
Sbjct: 3154 VVQVACGSRDAQTMALT--------TDGCVYSWGDGDFGKLGRGGSDGCYTPLVVERL-N 3204
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V V+CG + ++ G+VW+WG KG L P L+ G
Sbjct: 3205 GLGVVQVECGAQFSLALTKYGEVWTWG--KG----DYFRLGHGNDHHVRKPTLV--EGLR 3256
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G T P++V
Sbjct: 3257 GKKI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTSVNRKPSLV 3304
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 125/277 (45%), Gaps = 45/277 (16%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVVKVACGSEHVVALVSAGETY 149
A+++WG L D GG L S PV+ + +A GS+ + + G+
Sbjct: 2962 AVYVWG---LNDKDQLGG--LKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFIVSQEGK-- 3014
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
Y+ G NG+LGLGD + PK I +Q V V G H LT
Sbjct: 3015 ------LYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKV-AVHSGGKHALALTQ-- 3065
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +++G GE+G+LGHG S P+ ++ L + + + CG H++ ++S
Sbjct: 3066 ------DGKVFSWGEGEDGKLGHGNNMSLDKPKLIETL-KSKRIRDIACGSGHSAAIASN 3118
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAIS---PILISGNGPHGPKFQDPVQVACGA--A 324
G++++WG+ R GD ++ P L+ H VQVACG+ A
Sbjct: 3119 GELYTWGL---------GEYGRLGHGDTVTQARPKLVQTLVGH-----RVVQVACGSRDA 3164
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ +T DG ++SWG G G LG G + + P +V
Sbjct: 3165 QTMALTTDGC-VYSWGDGDFGKLGRGGSDGCYTPLVV 3200
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 48/254 (18%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V F V +A S+ H +AL +D YSWG + G+LG GD S
Sbjct: 498 PQRVHGFSDKLVTMIASHSDGKHHLALT--------QDGCVYSWGNGDGGRLGHGDTVSY 549
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
PK+IE + + + + CGS ++A L+ + +T+G G G+LGHG
Sbjct: 550 DEPKLIEALLEKN---IVFIACGSTYSAALS--------VSGELYTWGRGNYGRLGHGNF 598
Query: 236 QSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
++P V L + +V V CG T V+++G V+SWG
Sbjct: 599 DDVMIPTLVTTLKGHT-VVHVACGSGDSQTLCVTASGIVFSWG----------------- 640
Query: 294 AGDAISPILISGNGPHGPKFQDP------VQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
GD +G PK D V+V CG+ + +T G ++++WG+G + L
Sbjct: 641 DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGSQFSAALTAHG-EVYTWGKGDTYRL 699
Query: 348 GTGKTIDFFAPAIV 361
G G P I+
Sbjct: 700 GHGSEEHVRYPKII 713
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 27/206 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S A+ +G L+ WG + G + P+ V GHTVV VA
Sbjct: 563 IVFIACGSTYSAALSVSGELYTWGR---GNYGRLGHGNFDDVMIPTLVTTLKGHTVVHVA 619
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS + + ++G + +SWG + G+LG G + PKI++ +
Sbjct: 620 CGSGDSQTLCVTASG--------IVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLDIN--- 668
Query: 192 VYEVTCGS-FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V CGS F AL H + +T+G G+ +LGHG+ + P+ ++ L
Sbjct: 669 VVKVFCGSQFSAALTAHGE---------VYTWGKGDTYRLGHGSEEHVRYPKIIESLRDK 719
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ + G H V++ V+ WG
Sbjct: 720 -KIKDLSVGATHILVLTEDQFVYGWG 744
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 93/209 (44%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E+ + P + G T +
Sbjct: 3946 YGWGHNHRGQLGGLEGPKVKLPAPCESLSALRPIQL----AGGEQTLFAV-------TAD 3994
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
++ G G G+LG G T S ++P ++ + Q+V++ V+V G H +SS G V+S
Sbjct: 3995 GKVYSTGYGAAGRLGIGGTDSVMIPTLLESI-QHVFIKKVAVSSGGKHCLALSSEGHVYS 4053
Query: 275 WGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG + LG S R + + + + I + +ACG H+ +T
Sbjct: 4054 WGEGDDGKLGHGNKMSYDRPKLIEDLLGVEI-------------IDIACGGHHSAAITSA 4100
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L++WG+GR G LG G + D P +V
Sbjct: 4101 GW-LYTWGKGRYGRLGHGDSDDQLRPKVV 4128
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 30/226 (13%)
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCG 198
VA+ + + ++ Y WG N+ QLG G + S+++ P E ++ P + G
Sbjct: 2947 VAVQRSIDATPPQESAVYVWGLNDKDQLG-GLKGSKIKLPVYSEVLSKLKPIHI----AG 3001
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVD 257
T + + E + G G NG+LG G + P+ + L Q+V V+V
Sbjct: 3002 GSKTLFIVSQ-------EGKLYACGEGTNGRLGLGDDNNVCEPKPIPFLSQFVIKKVAVH 3054
Query: 258 CGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
G H ++ G V+SWG E G LG N SL + P LI K +
Sbjct: 3055 SGGKHALALTQDGKVFSWGEGEDGKLGHGNNMSLDK--------PKLI-----ETLKSKR 3101
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ACG+ H+ + +G +L++WG G G LG G T+ P +V
Sbjct: 3102 IRDIACGSGHSAAIASNG-ELYTWGLGEYGRLGHGDTVTQARPKLV 3146
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G V+KV CGS+
Sbjct: 4143 SGDAQTLCVTDDDNVWSWGD---GDYGKLGRGGSDGCKVPLKIDSLAGLGVIKVECGSQF 4199
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 4200 SVALTRSG--------AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4248
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4249 SLHCVACSDKGE--------VFTWGDNDEGQLGDGTTSALHRPRLVHAL-QGKKITRVAC 4299
Query: 259 GLFHTSVVSSA 269
G HT S+A
Sbjct: 4300 GSAHTLAWSTA 4310
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 89/237 (37%), Gaps = 61/237 (25%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S AI + G L+ WG L + G V+ P V GH VV+V
Sbjct: 3101 RIRDIACGSGHSAAIASNGELYTWG---LGEYGRLGHGDTVTQARPKLVQTLVGHRVVQV 3157
Query: 133 ACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
ACGS +AL + G YSWG + G+LG G + P ++E N
Sbjct: 3158 ACGSRDAQTMALTTDG--------CVYSWGDGDFGKLGRGGSDGCYTPLVVERLNG---L 3206
Query: 191 AVYEVTCGSFHTALLT---------------------HRKRPNDMLESM----------- 218
V +V CG+ + LT H R ++E +
Sbjct: 3207 GVVQVECGAQFSLALTKYGEVWTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKKIVHVAVG 3266
Query: 219 ------------CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+ +G ++GQ G+GTT P V EL + + V CG H+
Sbjct: 3267 ALHCLAVTDTGQVYAWGDNDHGQQGNGTTSVNRKPSLVHEL-EDARVNRVSCGSSHS 3322
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + PS V + V +V
Sbjct: 3259 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTSVNRKPSLVHELEDARVNRV 3315
Query: 133 ACGSEHVVALVSAGETYKG-EDLVCYSWGANNNGQLGLG 170
+CGS H +A V + G ++ V + + GQ+ LG
Sbjct: 3316 SCGSSHSIAWVLVDQPSSGNQEPVTFPTARDPLGQMCLG 3354
>gi|387193358|gb|AFJ68699.1| hypothetical protein NGATSA_3056200, partial [Nannochloropsis
gaditana CCMP526]
Length = 511
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/289 (30%), Positives = 132/289 (45%), Gaps = 36/289 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G + AI + GALW WG G + V P V F G V ++A
Sbjct: 93 IKQVTCGSYHTAAISDTGALWTWGGGMY---GKLGHGNEVGHPAPCRVEAFIGREVEQIA 149
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAV 192
CGS H AL++ GE Y WG NG G+G+ E + PK +E +
Sbjct: 150 CGSRHTAALLAGGEV--------YCWGDRENGVCGIGEAAEHQYLPKKLEALKGVK---I 198
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ FHTA +T + W++G G+ G+LG G ++ + P V+ L Q V
Sbjct: 199 TQIAACGFHTAAITQ--------DGALWSWGEGKFGRLGQGNEKNQVTPCCVEGL-QGVR 249
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ V CG FH++ V+ GDV ++G + + L + + P L+ G
Sbjct: 250 VKQVACGGFHSACVTEDGDVLTFGGGE------HGQLGHGDKTNRTVPCLVKALEGAG-- 301
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VQV CG +HTV +++DG K++++G G G LG G P +V
Sbjct: 302 ---IVQVTCGWSHTVTLSEDG-KVFTFGNGDHGKLGHGANAKSALPKLV 346
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 112/248 (45%), Gaps = 39/248 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P PV TVV++ACGS H V L ED +SWG ++G+LG D +
Sbjct: 30 PMPVEGLKHLTVVQIACGSGHTVVLT--------EDKDVWSWGRGDDGRLGHADNHWKYV 81
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P ++ S + +VTCGS+HTA ++ WT+G G G+LGHG
Sbjct: 82 PHLVSALTGKS---IKQVTCGSYHTAAISD--------TGALWTWGGGMYGKLGHGNEVG 130
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE---- 293
P +V+ + + CG HT+ + + G+V+ WG ++ G+C ++
Sbjct: 131 HPAPCRVEAFIGR-EVEQIACGSRHTAALLAGGEVYCWG-DRENGVCGIGEAAEHQYLPK 188
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+A+ + I+ Q+A HT +T DG LWSWG G+ G LG G
Sbjct: 189 KLEALKGVKIT-------------QIAACGFHTAAITQDG-ALWSWGEGKFGRLGQGNEK 234
Query: 354 DFFAPAIV 361
+ P V
Sbjct: 235 NQVTPCCV 242
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 82/183 (44%), Gaps = 34/183 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
+KI + A G + AI GALW WG EG F + + TP V
Sbjct: 196 VKITQIAACGFHTAAITQDGALWSWG---------EGKFGRLGQGNEKNQVTPCCVEGLQ 246
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V +VACG H + G+ ++G +GQLG GD+ +R P +++
Sbjct: 247 GVRVKQVACGGFHSACVTEDGDVL--------TFGGGEHGQLGHGDKTNRTVPCLVKALE 298
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ +VTCG HT L+ + +TFG G++G+LGHG + +P+ V+
Sbjct: 299 GA---GIVQVTCGWSHTVTLSE--------DGKVFTFGNGDHGKLGHGANAKSALPKLVE 347
Query: 246 ELP 248
L
Sbjct: 348 SLA 350
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+SM +++G GE+GQ G+G+T +P V+ L +++ +V + CG HT V++ DVWSW
Sbjct: 5 DSMLYSWGRGEDGQCGNGSTNDQEMPMPVEGL-KHLTVVQIACGSGHTVVLTEDKDVWSW 63
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G + L + P L+S K QV CG+ HT ++D G
Sbjct: 64 GRGD------DGRLGHADNHWKYVPHLVSALTGKSIK-----QVTCGSYHTAAISDTG-A 111
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
LW+WG G G LG G + AP V
Sbjct: 112 LWTWGGGMYGKLGHGNEVGHPAPCRV 137
>gi|168052711|ref|XP_001778783.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669789|gb|EDQ56369.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 461
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 95/296 (32%), Positives = 127/296 (42%), Gaps = 47/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+++ + G LAI G + WG N L TE TP + F G
Sbjct: 119 LEVKQIACGDSHCLAITTDGEVLGWGRNQNGQLGLGHTE------DVLTPHKLTAFEGVA 172
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ G+ Y WG G LGLGDRE RL P + +
Sbjct: 173 VKMLAAGAEHTTAVTENGK--------LYGWGWGRYGNLGLGDREDRLVPDQVAAVAGE- 223
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT + +TFG + GQLGHG L+P QV+ L
Sbjct: 224 --LMKMVACGWRHTICVAE--------SGNMYTFGWSKYGQLGHGDFADHLIPHQVQAL- 272
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-GLGLCPNASLTRNEAGDAISPILISGNG 307
+ + ++ G HT + S G ++ WG K G C N D SP L+ G
Sbjct: 273 KSKKIQAITGGWRHTFALDSDGRLYGWGWNKFGQVGCGNTE-------DQSSPQLVKG-- 323
Query: 308 PHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD V V CG HT+ +TD G ++SWGRG SG LG G T+D P +
Sbjct: 324 -----LQDQVVTVVQCGWRHTLAMTDRG-NVYSWGRGTSGQLGHGDTVDRSTPKRI 373
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 113/233 (48%), Gaps = 31/233 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ ++ G+ H VAL+S DLVC SWG +GQLG GD E R P I+ +
Sbjct: 16 VLALSAGASHSVALLSG-------DLVC-SWGRGEDGQLGHGDAEERHFPTIVSALDD-- 65
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ VTCG+ HT L++ + +++G G+ G+LGHG + +P+ +K L
Sbjct: 66 -CEISSVTCGADHTTALSNSTK-------TVYSWGWGDFGRLGHGNSSDLFIPQPIKAL- 116
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + + CG H +++ G+V WG + N L D ++P ++
Sbjct: 117 KGLEVKQIACGDSHCLAITTDGEVLGWGRNQ------NGQLGLGHTEDVLTPHKLTAFEG 170
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K +A GA HT VT++G KL+ WG GR G LG G D P V
Sbjct: 171 VAVKM-----LAAGAEHTTAVTENG-KLYGWGWGRYGNLGLGDREDRLVPDQV 217
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 67/174 (38%), Gaps = 33/174 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
IC ++G M + G L G P V + +
Sbjct: 236 ICVAESGNMYTFGWSKYGQL--------------GHGDFADHLIPHQVQALKSKKIQAIT 281
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL S G Y WG N GQ+G G+ E + P++++ QD V
Sbjct: 282 GGWRHTFALDSDGR--------LYGWGWNKFGQVGCGNTEDQSSPQLVKGL-QDQ--VVT 330
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V CG HT +T R +++G G +GQLGHG T P++++ L
Sbjct: 331 VVQCGWRHTLAMTDRGN--------VYSWGRGTSGQLGHGDTVDRSTPKRIEIL 376
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 47/115 (40%), Gaps = 11/115 (9%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI ++ G + A+D+ G L+ WG G + +P V V V
Sbjct: 276 KIQAITGGWRHTFALDSDGRLYGWGWNKF---GQVGCGNTEDQSSPQLVKGLQDQVVTVV 332
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ G Y SWG +GQLG GD R PK IE + D
Sbjct: 333 QCGWRHTLAMTDRGNVY--------SWGRGTSGQLGHGDTVDRSTPKRIEILSSD 379
>gi|380019055|ref|XP_003693433.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Apis florea]
Length = 4812
Score = 105 bits (263), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 94/334 (28%), Positives = 150/334 (44%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S +VP ++E +K +V +GG LA+ + G
Sbjct: 4016 GRLGIGGTDSVMVPTLLESI----------------QHVFVKKVAVNSGGKHCLALSSEG 4059
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + +S P + + G +V +ACG H A+ SAG
Sbjct: 4060 HVYSWGEG---DDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAG----- 4111
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD E +L PK+IE QD + V +V CGS L
Sbjct: 4112 ---WLYTWGKGRYGRLGHGDSEDQLTPKLIEAL-QD--YKVIDVACGSGDAQTLCVTDDD 4165
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + +P +++ L + +V V+CG + ++ +G
Sbjct: 4166 N------VWSWGDGDYGKLGRGGSDGCKIPMKIESLAG-LGVVKVECGSQFSVALTRSGA 4218
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
+++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4219 IYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4263
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
TD G ++++WG G LG G T P +V
Sbjct: 4264 ACTDKG-EVFTWGDNDEGQLGDGTTSALQRPRLV 4296
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 138/312 (44%), Gaps = 45/312 (14%)
Query: 60 LEDDSKTNHKAPI--------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L DDS PI K SV +GG +LA+ G ++ WG + G +
Sbjct: 3001 LGDDSNVCEPKPIPFLSQYVIKKVSVHSGGKHALALTQDGKVFSWGEG---EDGKLGHGN 3057
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+S P + + +ACGS H A+ S+GE Y+WG G+LG GD
Sbjct: 3058 SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGE--------LYTWGLGEYGRLGHGD 3109
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
++ +PK++++ + ++ CGS T LT + + +++G G+ G+
Sbjct: 3110 TATQSKPKLVQSLVGQR---IIQIACGSRDAQTMALT--------ADGLVYSWGDGDFGK 3158
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG G + P + L + +V ++CG + ++ G+VW+WG KG L
Sbjct: 3159 LGRGGSDGCYTPLLIDRL-NGLGVVQIECGAQFSLALTKYGEVWTWG--KG----DYFRL 3211
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
P L+ G G K + VA GA H + VTD G ++++WG G G
Sbjct: 3212 GHGNDHHVRKPTLVE--GLRGKKV---IHVAVGALHCLAVTDIG-QVYAWGDNDHGQQGN 3265
Query: 350 GKTIDFFAPAIV 361
G TI P++V
Sbjct: 3266 GTTIVNKKPSLV 3277
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 128/277 (46%), Gaps = 45/277 (16%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVVKVACGSEHVVALVSAGETY 149
A+++WG L D GG L S PV+ V +A GS+ + + G+
Sbjct: 2935 AVYVWG---LNDKDQLGG--LKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGK-- 2987
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTH 207
Y+ G NG+LGLGD + PK I +Q + + +V+ G H LT
Sbjct: 2988 ------LYACGEGTNGRLGLGDDSNVCEPKPIPFLSQ---YVIKKVSVHSGGKHALALTQ 3038
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ +++G GE+G+LGHG + S P ++ L + + + CG H++ ++
Sbjct: 3039 --------DGKVFSWGEGEDGKLGHGNSISLDKPRLIESL-KSKRIRDIACGSGHSAAIT 3089
Query: 268 SAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--A 324
S+G++++WG+ E G L + P L+ Q +Q+ACG+ A
Sbjct: 3090 SSGELYTWGLGEYG-------RLGHGDTATQSKPKLV-----QSLVGQRIIQIACGSRDA 3137
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ +T DG ++SWG G G LG G + + P ++
Sbjct: 3138 QTMALTADGL-VYSWGDGDFGKLGRGGSDGCYTPLLI 3173
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 122/284 (42%), Gaps = 57/284 (20%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V+ F ++ +A S+ H +AL +D YSWG + G+LG GDR
Sbjct: 494 PQRVYGFSEKPIIMIASHSDGTHYLALT--------QDNSVYSWGNGDGGRLGHGDRAWY 545
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
PK+IE + + + + CGS ++A L+ +T+G G G+LGHG +
Sbjct: 546 DEPKLIEALVEKN---ITFIACGSTYSAALSSNGE--------LYTWGRGNYGRLGHGNS 594
Query: 236 QSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
+ ++P V L + V V+ G T V+++G V+SWG + G G C
Sbjct: 595 DNVMIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC------ 648
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRS 344
+G PK D + +V CG + +T G ++++WG+G +
Sbjct: 649 ---------------DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG-EVYTWGKGEA 692
Query: 345 GVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKD 388
LG G P I+ + + K EL G L T+D
Sbjct: 693 YRLGHGNEDHVRYPKII---DILKTKKVKELCVGNLHVLALTED 733
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P + E+ + P ++T G +T +
Sbjct: 3956 YGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP---VQLTGGEQTLFAVT--------AD 4004
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S +VP ++ + Q+V++ V+V+ G H +SS G V+S
Sbjct: 4005 GKVYATGYGAVGRLGIGGTDSVMVPTLLESI-QHVFVKKVAVNSGGKHCLALSSEGHVYS 4063
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG E G + + + I +L + + V +ACG H+ +T G+
Sbjct: 4064 WG-EGDDGKLGHGNRLSYDRPKLIEELLGT----------EIVDIACGGHHSAAITSAGW 4112
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG G + D P ++
Sbjct: 4113 -LYTWGKGRYGRLGHGDSEDQLTPKLI 4138
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 4153 SGDAQTLCVTDDDNVWSWGDG---DYGKLGRGGSDGCKIPMKIESLAGLGVVKVECGSQF 4209
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 4210 SVALTRSG--------AIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4258
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4259 SLHCVACTDKGE--------VFTWGDNDEGQLGDGTTSALQRPRLVHAL-QGKKITRVAC 4309
Query: 259 GLFHT 263
G HT
Sbjct: 4310 GSAHT 4314
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ G SLA+ G +W WG D G + P+ V G V+ VA
Sbjct: 3181 VVQIECGAQFSLALTKYGEVWTWGKG---DYFRLGHGNDHHVRKPTLVEGLRGKKVIHVA 3237
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P ++ + V
Sbjct: 3238 VGALHCLAVTDIGQV--------YAWGDNDHGQQGNGTTIVNKKPSLVHELDDAR---VN 3286
Query: 194 EVTCGSFHT 202
V+CGS H+
Sbjct: 3287 RVSCGSSHS 3295
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
C + M+L D G ++ WG+ D G +TP + +G VV++ C
Sbjct: 3132 CGSRDAQTMALTAD--GLVYSWGDG---DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIEC 3186
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G++ +AL GE ++WG + +LG G+ +P ++E V
Sbjct: 3187 GAQFSLALTKYGEV--------WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK---VIH 3235
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V G+ H +T D+ + W G ++GQ G+GTT P V EL +
Sbjct: 3236 VAVGALHCLAVT------DIGQVYAW--GDNDHGQQGNGTTIVNKKPSLVHELDD-ARVN 3286
Query: 255 SVDCGLFHT 263
V CG H+
Sbjct: 3287 RVSCGSSHS 3295
Score = 41.6 bits (96), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 61/152 (40%), Gaps = 22/152 (14%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + +G ++ WG+ + G S TP V V KV CG +
Sbjct: 618 SGDSQTLCVTASGIVFSWGDG---NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQF 674
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
AL + GE Y+WG +LG G+ + PKII+ V E+ G
Sbjct: 675 SAALTAYGEV--------YTWGKGEAYRLGHGNEDHVRYPKIIDILKTKK---VKELCVG 723
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ H LT + + + +G + GQ+
Sbjct: 724 NLHVLALTE--------DQLIYGWGRNDYGQI 747
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ + G ++ WG+ D +G + + + PS V + V +V
Sbjct: 3232 KVIHVAVGALHCLAVTDIGQVYAWGD---NDHGQQGNGTTIVNKKPSLVHELDDARVNRV 3288
Query: 133 ACGSEHVVALVSAGE-TYKGEDLVCYSWGANNNGQLGL 169
+CGS H +A V + T ++ V + + GQ+ L
Sbjct: 3289 SCGSSHSIAWVLTDQPTINNQEPVTFPTTKDPLGQMLL 3326
>gi|390352695|ref|XP_003727958.1| PREDICTED: uncharacterized protein LOC100887866 [Strongylocentrotus
purpuratus]
Length = 1139
Score = 105 bits (263), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 129/296 (43%), Gaps = 39/296 (13%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKIC----SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTE 107
LTI P ED ++ + P+ + +V A G AI G ++ WG
Sbjct: 749 LTI--PVCPEDTLNSSDRLPVGLLLPTQNVLACGQDHAAIVANGDVYTWGRAHEGRLGQG 806
Query: 108 GGFSLVSSFTPSPVWDFHGH--TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
SL P V H H V VACG EH +A+ G+ YSWG+++ G
Sbjct: 807 DIMSLDGRAPPLRVETLHMHGIHVRAVACGKEHTMAVTQEGK--------LYSWGSSSYG 858
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
QLG+GDR RP +E S V CG HT +LT +R W+FG G
Sbjct: 859 QLGVGDRNVHSRPVAVEAL---SGQRCLSVACGQLHTLVLTQDQR--------LWSFGWG 907
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+GQLGHG + ++P+ V +L + +V + G H+ +++ G VW +G G
Sbjct: 908 VHGQLGHGDVEDQILPKLVNQLSK-CAIVGISAGYAHSGALTNDGQVWMFG-SSSFGQLG 965
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
S+ G + P+ + H + CG + +T + K+++WG+
Sbjct: 966 TGSI-----GKSTVPVRLKALSSHHVSI-----LTCGYYSNIAITSNPQKVYTWGK 1011
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 79/173 (45%), Gaps = 29/173 (16%)
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS---ALVPEQVKELPQY- 250
+ CG H A++ + +T+G G+LG G S P +V+ L +
Sbjct: 777 LACGQDHAAIVANGD---------VYTWGRAHEGRLGQGDIMSLDGRAPPLRVETLHMHG 827
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGP 308
+++ +V CG HT V+ G ++SWG LG+ +R A +A+S
Sbjct: 828 IHVRAVACGKEHTMAVTQEGKLYSWGSSSYGQLGVGDRNVHSRPVAVEALSG-------- 879
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q + VACG HT+++T D +LWS+G G G LG G D P +V
Sbjct: 880 -----QRCLSVACGQLHTLVLTQD-QRLWSFGWGVHGQLGHGDVEDQILPKLV 926
>gi|322795832|gb|EFZ18511.1| hypothetical protein SINV_14428 [Solenopsis invicta]
Length = 786
Score = 105 bits (262), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 136/294 (46%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +A+ + G ++ WG D G + VS P + D G +V
Sbjct: 14 IKKVAVSSGGKHCIALSSEGHVYSWGEG---DDGKLGHGNKVSYDRPKLIEDLLGVEIVD 70
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H A+ SAG Y+WG G+LG GD + +LRPK++E QD +
Sbjct: 71 IACGGHHSAAITSAGW--------LYTWGKGRYGRLGHGDSDDQLRPKVVEAL-QD--YK 119
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L N W++G G+ G+LG G + VP ++ L +
Sbjct: 120 VIDVACGSGDAQTLCVTDDDN------VWSWGDGDYGKLGRGGSDGCKVPLKIDSLAG-L 172
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V V+CG + ++ +G V++WG KG LG + + R A+
Sbjct: 173 GVVKVECGSQFSVALTRSGAVYTWG--KGDYHRLGHGTDDHVRRPRKVAAL--------- 221
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G T P +V
Sbjct: 222 -QGKKI---ISIATGSLHCVACSDKG-EVFTWGDNDEGQLGDGTTSALHRPRLV 270
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + A + + V+ G S+A+ +GA++ WG D G +
Sbjct: 155 GGSDGCKVPLKIDSLAGLGVVKVECGSQFSVALTRSGAVYTWGKG---DYHRLGHGTDDH 211
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA GE ++WG N+ GQLG G +
Sbjct: 212 VRRPRKVAALQGKKIISIATGSLHCVACSDKGEV--------FTWGDNDEGQLGDGTTSA 263
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ + V CGS HT
Sbjct: 264 LHRPRLVHALQGKK---ITRVACGSAHT 288
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 76/191 (39%), Gaps = 23/191 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 127 SGDAQTLCVTDDDNVWSWGDG---DYGKLGRGGSDGCKVPLKIDSLAGLGVVKVECGSQF 183
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 184 SVALTRSG--------AVYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 232
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 233 SLHCVACSDKGE--------VFTWGDNDEGQLGDGTTSALHRPRLVHAL-QGKKITRVAC 283
Query: 259 GLFHTSVVSSA 269
G HT S+A
Sbjct: 284 GSAHTLAWSTA 294
>gi|145512133|ref|XP_001441983.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409255|emb|CAK74586.1| unnamed protein product [Paramecium tetraurelia]
Length = 2041
Score = 105 bits (262), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 136/279 (48%), Gaps = 32/279 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ + G ++A+ GA+++WG + G + TP+ + D G ++
Sbjct: 300 EFVKIVCGHHHTMALTEEGAVFIWG---MGSQGCLGNGRVDDLETPTQI-DISGLFFNEI 355
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G+ H +AL + Y WG NN GQLG+G++E++L PK + F++
Sbjct: 356 AAGAYHSLALAKNNQVY--------GWGVNNRGQLGIGNKENQLLPKQLTFFDRKKIQCQ 407
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
Y + CG H+A +T K +T+G G+ +LGHG + P+++ E+ Q VY
Sbjct: 408 Y-LYCGDQHSACITTNKE--------LYTWGNGDYYRLGHGMLLDEMEPKKI-EILQDVY 457
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++ V G H+ +++ G V++WG K L + + D P + G
Sbjct: 458 VLDVALGTIHSLCITNEGFVYAWGSSKDSVL----GMPTQQYKDQTLPQRV---GLMSQS 510
Query: 313 FQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
F+D QVA G +H++ ++++G+ L+ WG ++ +LG
Sbjct: 511 FRDASFYQVAAGTSHSLSLSENGH-LYVWGSNKNSLLGV 548
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/248 (23%), Positives = 92/248 (37%), Gaps = 51/248 (20%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
SFTP + F + ++C H +A+ + G Y WG+N QLGLG +
Sbjct: 675 QSFTPIEIVYFRNTIIRYISCQYNHCIAVTAKGN--------AYCWGSNQYNQLGLGFQS 726
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ I+ + + +T F +ALLT + W+FG E G LGH
Sbjct: 727 DHVFTPILLEGAIEQKVIIMAITGEKF-SALLTD--------QGEVWSFGTSEFGVLGHE 777
Query: 234 TTQSALV--PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-------------E 278
++ P + ++P + L + +F + +W+WG E
Sbjct: 778 LKNFYVIMEPRMINDIPSMINLACSNQTMF---AIDQKQQLWAWGNNQFGQLGISLQRDE 834
Query: 279 KGLGLCPN--------------ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+ + L N SL E P S G F D QV+CG
Sbjct: 835 EEINLQTNKQVSSEFLEWKAQLKSLKNPERYIVYQPDKPSTRSITGEAFVD--QVSCGLY 892
Query: 325 HTVLVTDD 332
HT ++T +
Sbjct: 893 HTCIITTN 900
Score = 46.6 bits (109), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/177 (22%), Positives = 67/177 (37%), Gaps = 38/177 (21%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CG HT LT E + +G+G G LG+G P Q+ ++
Sbjct: 303 KIVCGHHHTMALTE--------EGAVFIWGMGSQGCLGNGRVDDLETPTQID--ISGLFF 352
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ G +H+ ++ V+ WG+ G+G N L P
Sbjct: 353 NEIAAGAYHSLALAKNNQVYGWGVNNRGQLGIGNKENQLL------------------PK 394
Query: 310 GPKFQDPVQVAC-----GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F D ++ C G H+ +T + +L++WG G LG G +D P +
Sbjct: 395 QLTFFDRKKIQCQYLYCGDQHSACITTNK-ELYTWGNGDYYRLGHGMLLDEMEPKKI 450
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 78/203 (38%), Gaps = 38/203 (18%)
Query: 167 LGLGDRESRLRPKIIETF--NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 224
LG GD ++ P E F + S E+ ++ +LT RP E + +G
Sbjct: 173 LGTGDEANKDEPNAFEKFFMMEKSKDGKTEINI-CYYYQMLTQESRP----EYIAIVWGN 227
Query: 225 GENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLG 282
NG+LG P+ + D + S D S M++
Sbjct: 228 PANGRLG---------------APKSKFPNESDKQTIFNNNNPSQMDFTSRQMQQPSRTQ 272
Query: 283 LCPNASLTRNEA----GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
N+ N+A D I PI + Q+ V++ CG HT+ +T++G ++
Sbjct: 273 QVQNSQYNLNQAEPNNSDFIQPIALK---------QEFVKIVCGHHHTMALTEEG-AVFI 322
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G G LG G+ D P +
Sbjct: 323 WGMGSQGCLGNGRVDDLETPTQI 345
>gi|328793081|ref|XP_395007.4| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Apis mellifera]
Length = 4643
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 93/334 (27%), Positives = 150/334 (44%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S +VP ++E +K +V +GG LA+ + G
Sbjct: 3847 GRLGIGGTDSVMVPTLLESI----------------QHVFVKKVAVNSGGKHCLALSSEG 3890
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + +S P + + G +V +ACG H A+ SAG
Sbjct: 3891 HVYSWGEG---DDGKLGHGNRLSYDRPKLIEELLGTEIVDIACGGHHSAAITSAG----- 3942
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD E +L PK+IE QD + V +V CGS L
Sbjct: 3943 ---WLYTWGKGRYGRLGHGDSEDQLTPKLIEAL-QD--YKVIDVACGSGDAQTLCVTDDD 3996
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + +P +++ L + ++ V+CG + ++ +G
Sbjct: 3997 N------VWSWGDGDYGKLGRGGSDGCKIPMKIESLAG-LGVIKVECGSQFSVALTRSGA 4049
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
+++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4050 IYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4094
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
TD G ++++WG G LG G T P +V
Sbjct: 4095 ACTDKG-EVFTWGDNDEGQLGDGTTSALQRPRLV 4127
Score = 94.7 bits (234), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 138/312 (44%), Gaps = 45/312 (14%)
Query: 60 LEDDSKTNHKAPI--------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L DDS PI K +V +GG +LA+ G ++ WG + G +
Sbjct: 2857 LGDDSNVCEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGKVFSWGEG---EDGKLGHGN 2913
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+S P + + +ACGS H A+ S+GE Y+WG G+LG GD
Sbjct: 2914 SISLDKPRLIESLKSKRIRDIACGSGHSAAITSSGE--------LYTWGLGEYGRLGHGD 2965
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
++ +PK++++ V ++ CGS T LT + + +++G G+ G+
Sbjct: 2966 TATQSKPKLVQSLVGQR---VIQIACGSRDAQTMALT--------ADGLVYSWGDGDFGK 3014
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG G + P + L + +V ++CG + ++ G+VW+WG KG L
Sbjct: 3015 LGRGGSDGCYTPLLIDRL-NGLGVVQIECGAQFSLALTKYGEVWTWG--KG----DYFRL 3067
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
P L+ G G K + VA GA H + VTD G ++++WG G G
Sbjct: 3068 GHGNDHHVRKPTLVE--GLRGKKI---IHVAVGALHCLAVTDIG-QVYAWGDNDHGQQGN 3121
Query: 350 GKTIDFFAPAIV 361
G TI P++V
Sbjct: 3122 GTTIVNKKPSLV 3133
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 125/275 (45%), Gaps = 41/275 (14%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVVKVACGSEHVVALVSAGETY 149
A+++WG L D GG L S PV+ V +A GS+ + + G+
Sbjct: 2791 AVYVWG---LNDKDQLGG--LKGSKIKLPVYSEVLSKLKPVHIAGGSKTLFVVSQEGK-- 2843
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
Y+ G NG+LGLGD + PK I +Q V V G H LT
Sbjct: 2844 ------LYACGEGTNGRLGLGDDSNVCEPKPIPFLSQYVIKKV-AVHSGGKHALALTQ-- 2894
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +++G GE+G+LGHG + S P ++ L + + + CG H++ ++S+
Sbjct: 2895 ------DGKVFSWGEGEDGKLGHGNSISLDKPRLIESL-KSKRIRDIACGSGHSAAITSS 2947
Query: 270 GDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHT 326
G++++WG+ E G L + P L+ Q +Q+ACG+ A T
Sbjct: 2948 GELYTWGLGEYG-------RLGHGDTATQSKPKLV-----QSLVGQRVIQIACGSRDAQT 2995
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +T DG ++SWG G G LG G + + P ++
Sbjct: 2996 MALTADGL-VYSWGDGDFGKLGRGGSDGCYTPLLI 3029
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P + E+ + P ++T G +T +
Sbjct: 3787 YGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP---VQLTGGEQTLFAVT--------AD 3835
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S +VP ++ + Q+V++ V+V+ G H +SS G V+S
Sbjct: 3836 GKVYATGYGAVGRLGIGGTDSVMVPTLLESI-QHVFVKKVAVNSGGKHCLALSSEGHVYS 3894
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG E G + + + I +L + + V +ACG H+ +T G+
Sbjct: 3895 WG-EGDDGKLGHGNRLSYDRPKLIEELLGT----------EIVDIACGGHHSAAITSAGW 3943
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG G + D P ++
Sbjct: 3944 -LYTWGKGRYGRLGHGDSEDQLTPKLI 3969
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 111/257 (43%), Gaps = 53/257 (20%)
Query: 124 FHGHTVVKVACGSEHVVALVSA---GETYKG--EDLVCYSWGANNNGQLGLGDRESRLRP 178
++G +V SE + ++++ G Y +D YSWG G+LG G+ P
Sbjct: 486 YYGSETQRVYGFSEKPITMIASHSDGTHYLALTQDNSVYSWGNGECGRLGHGNMTWYDEP 545
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QS 237
K+IE + + + + CGS ++A L+ +T+G G G+LGHG + +
Sbjct: 546 KLIEALVEKN---ITFIACGSTYSAALSSNGE--------LYTWGRGNYGKLGHGNSDKD 594
Query: 238 ALVPEQVKELPQYVYLVSVDCG---LFHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
++P V L ++ +V V CG T V+++G V+SWG + G G C
Sbjct: 595 VMIPTLVTALNGHM-VVYVACGGGRDPQTLCVTASGIVFSWGDGNHGKLGRGGC------ 647
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRS 344
+G PK D + +V CG + +T G ++++WG+G
Sbjct: 648 ---------------DGSKTPKIVDKLLDINVAKVYCGQQFSAALTAYG-EVYTWGKGED 691
Query: 345 GVLGTGKTIDFFAPAIV 361
LG G P I+
Sbjct: 692 YKLGHGNEDHVRYPKII 708
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 99/243 (40%), Gaps = 39/243 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S A+ + G L+ WG G S P+ V +GH VV VA
Sbjct: 556 ITFIACGSTYSAALSSNGELYTWGRGNY--GKLGHGNSDKDVMIPTLVTALNGHMVVYVA 613
Query: 134 CG---SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
CG + + ++G + +SWG N+G+LG G + PKI++ +
Sbjct: 614 CGGGRDPQTLCVTASG--------IVFSWGDGNHGKLGRGGCDGSKTPKIVDKLLDINVA 665
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
VY CG +A LT +T+G GE+ +LGHG P ++ ++ +
Sbjct: 666 KVY---CGQQFSAALTAYGE--------VYTWGKGEDYKLGHGNEDHVRYP-KIIDILKT 713
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWG------MEKGLG-------LCPNASLTRNEAGDA 297
+ + G H ++ V+ WG ++ LG LCP S +N G A
Sbjct: 714 KKIKDLYIGHLHVLALTEDQLVYGWGRNDHGQIDPALGTIVPEPTLCPTFS-GKNVIGLA 772
Query: 298 ISP 300
P
Sbjct: 773 CGP 775
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G V+KV CGS+
Sbjct: 3984 SGDAQTLCVTDDDNVWSWGDG---DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF 4040
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 4041 SVALTRSG--------AIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4089
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4090 SLHCVACTDKGE--------VFTWGDNDEGQLGDGTTSALQRPRLVHAL-QGKKITRVAC 4140
Query: 259 GLFHT 263
G HT
Sbjct: 4141 GSAHT 4145
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ G SLA+ G +W WG D G + P+ V G ++ VA
Sbjct: 3037 VVQIECGAQFSLALTKYGEVWTWGKG---DYFRLGHGNDHHVRKPTLVEGLRGKKIIHVA 3093
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P ++ + V
Sbjct: 3094 VGALHCLAVTDIGQV--------YAWGDNDHGQQGNGTTIVNKKPSLVHELDDAR---VN 3142
Query: 194 EVTCGSFHT 202
V+CGS H+
Sbjct: 3143 RVSCGSSHS 3151
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
C + M+L D G ++ WG+ D G +TP + +G VV++ C
Sbjct: 2988 CGSRDAQTMALTAD--GLVYSWGDG---DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIEC 3042
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G++ +AL GE ++WG + +LG G+ +P ++E +
Sbjct: 3043 GAQFSLALTKYGEV--------WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK---IIH 3091
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V G+ H +T D+ + W G ++GQ G+GTT P V EL +
Sbjct: 3092 VAVGALHCLAVT------DIGQVYAW--GDNDHGQQGNGTTIVNKKPSLVHELDD-ARVN 3142
Query: 255 SVDCGLFHT 263
V CG H+
Sbjct: 3143 RVSCGSSHS 3151
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + + PS V + V +V
Sbjct: 3088 KIIHVAVGALHCLAVTDIGQVYAWGD---NDHGQQGNGTTIVNKKPSLVHELDDARVNRV 3144
Query: 133 ACGSEHVVALV 143
+CGS H +A V
Sbjct: 3145 SCGSSHSIAWV 3155
>gi|221482889|gb|EEE21220.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii GT1]
Length = 1020
Score = 105 bits (261), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 139/304 (45%), Gaps = 70/304 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHTVVKVA 133
V AGGM + ++G L+MWG +++EG + P V HG V VA
Sbjct: 138 VSAGGMQMAVVAHSGELYMWG------ANSEGQLGTGDRRDASVPRLVKALHGKVVKAVA 191
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------------------GDRESR 175
C EH V + +D Y+WG NG+LGL G R
Sbjct: 192 CSQEHTVCCL--------DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 243
Query: 176 L-------RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
L P+++E+ + + +V CG +H+A L ++ L +T GLG NG
Sbjct: 244 LASACAVCTPRVLESLCG---YFIADVACGPYHSAFLGIYEQDRTSL----FTCGLGLNG 296
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLC 284
+LGHG + +P V L + V + ++ CG HT+ V+SAG +++WG GLG
Sbjct: 297 RLGHGDEEDRHLPTAVHAL-ENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLG-- 353
Query: 285 PNASLTRNEAGDAISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
+ G + P +S GP + + V VA G+ H+ VT DG +L++WG+GR
Sbjct: 354 -------STRGSQLLPKHVS-----GPLRNKAVVSVALGSQHSACVTTDG-ELYTWGQGR 400
Query: 344 SGVL 347
G L
Sbjct: 401 RGNL 404
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 97/246 (39%), Gaps = 51/246 (20%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+ G + + +GE Y WGAN+ GQLG GDR P++++ +
Sbjct: 137 RVSAGGMQMAVVAHSGELYM--------WGANSEGQLGTGDRRDASVPRLVKALHGK--- 185
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HG------------TTQS 237
V V C HT + + + +G NG+LG HG + +
Sbjct: 186 VVKAVACSQEHTVCC--------LDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 237
Query: 238 ALVPEQVKE-----LPQYV------YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
PE + P+ + ++ V CG +H++ + + GLGL N
Sbjct: 238 GARPEPLASACAVCTPRVLESLCGYFIADVACGPYHSAFLGIYEQDRTSLFTCGLGL--N 295
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
L + D P + H + + +ACGA HT VT G L++WG G
Sbjct: 296 GRLGHGDEEDRHLPTAV-----HALENVNITAIACGAHHTACVTSAG-TLYTWGGAAFGK 349
Query: 347 LGTGKT 352
LG G T
Sbjct: 350 LGLGST 355
>gi|237840751|ref|XP_002369673.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|211967337|gb|EEB02533.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii ME49]
gi|221503319|gb|EEE29017.1| regulator of chromosome condensation RCC1 domain-containing protein
[Toxoplasma gondii VEG]
Length = 1015
Score = 105 bits (261), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 92/304 (30%), Positives = 139/304 (45%), Gaps = 70/304 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHTVVKVA 133
V AGGM + ++G L+MWG +++EG + P V HG V VA
Sbjct: 138 VSAGGMQMAVVAHSGELYMWG------ANSEGQLGTGDRRDASVPRLVKALHGKVVKAVA 191
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------------------GDRESR 175
C EH V + +D Y+WG NG+LGL G R
Sbjct: 192 CSQEHTVCCL--------DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 243
Query: 176 L-------RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
L P+++E+ + + +V CG +H+A L ++ L +T GLG NG
Sbjct: 244 LASACAVCTPRVLESLCG---YFIADVACGPYHSAFLGIYEQDRTSL----FTCGLGLNG 296
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLC 284
+LGHG + +P V L + V + ++ CG HT+ V+SAG +++WG GLG
Sbjct: 297 RLGHGDEEDRHLPTAVHAL-ENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLG-- 353
Query: 285 PNASLTRNEAGDAISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
+ G + P +S GP + + V VA G+ H+ VT DG +L++WG+GR
Sbjct: 354 -------STRGSQLLPKHVS-----GPLRNKAVVSVALGSQHSACVTTDG-ELYTWGQGR 400
Query: 344 SGVL 347
G L
Sbjct: 401 RGNL 404
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 53/247 (21%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+ G + + +GE Y WGAN+ GQLG GDR P++++ +
Sbjct: 137 RVSAGGMQMAVVAHSGELYM--------WGANSEGQLGTGDRRDASVPRLVKALHGK--- 185
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HG---------------- 233
V V C HT + + + +G NG+LG HG
Sbjct: 186 VVKAVACSQEHTVCC--------LDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 237
Query: 234 --------TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+ + P ++ L Y ++ V CG +H++ + + GLGL
Sbjct: 238 GARPEPLASACAVCTPRVLESLCGY-FIADVACGPYHSAFLGIYEQDRTSLFTCGLGL-- 294
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N L + D P + H + + +ACGA HT VT G L++WG G
Sbjct: 295 NGRLGHGDEEDRHLPTAV-----HALENVNITAIACGAHHTACVTSAG-TLYTWGGAAFG 348
Query: 346 VLGTGKT 352
LG G T
Sbjct: 349 KLGLGST 355
>gi|357163608|ref|XP_003579788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Brachypodium distachyon]
Length = 449
Score = 105 bits (261), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 102/337 (30%), Positives = 143/337 (42%), Gaps = 59/337 (17%)
Query: 32 DGQLGFS-GSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DGQLG + LVP VI F AP +I SV G + A
Sbjct: 50 DGQLGHGDAEDRLVPTVISGF-----------------DAP-RITSVICGADHTTAYSEE 91
Query: 91 GAL---WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
W WG D G + FTP PV G + ++ACG H +A+ GE
Sbjct: 92 EQQVYSWGWG-----DFGRLGHGNSSDVFTPQPVRALQGIKIKQMACGDSHCLAVTMGGE 146
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
SWG N NGQLGLG E L P+ I+ F V + G+ HTA +T
Sbjct: 147 VQ--------SWGRNQNGQLGLGTTEDSLLPQKIQAFEGI---CVKMIAAGAEHTAAVTE 195
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ + +G G G LG G VPE+V L + +V + CG HT VS
Sbjct: 196 --------DGDLYGWGWGRYGNLGLGDRNDRFVPEKVS-LVEGEKMVLIACGWRHTITVS 246
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
S+G ++++G K L + D + P + K Q++ G HT+
Sbjct: 247 SSGILYTYGWSK------YGQLGHGDFEDHLFPHKV-----EALKDSSTSQISGGWRHTM 295
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+T DG KL+ WG + G +G G ++D +P V++P
Sbjct: 296 ALTSDG-KLYGWGWNKFGQVGAGDSVDHCSPVQVMFP 331
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 110/235 (46%), Gaps = 35/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV V+ G+ H VAL+ E V SWG +GQLG GD E RL P +I F D+
Sbjct: 23 VVLVSAGASHSVALL--------EGNVLCSWGRGEDGQLGHGDAEDRLVPTVISGF--DA 72
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P + V CG+ HT + E +++G G+ G+LGHG + P+ V+ L
Sbjct: 73 P-RITSVICGADHTTAYSEE-------EQQVYSWGWGDFGRLGHGNSSDVFTPQPVRAL- 123
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG H V+ G+V SWG + N L D++ P I
Sbjct: 124 QGIKIKQMACGDSHCLAVTMGGEVQSWGRNQ------NGQLGLGTTEDSLLPQKIQ---- 173
Query: 309 HGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ +A GA HT VT+DG L+ WG GR G LG G D F P V
Sbjct: 174 ---AFEGICVKMIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRNDRFVPEKV 224
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 128/296 (43%), Gaps = 47/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IKI + G LA+ G + WG N L +TE S P + F G
Sbjct: 126 IKIKQMACGDSHCLAVTMGGEVQSWGRNQNGQLGLGTTE------DSLLPQKIQAFEGIC 179
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR R P+ + +
Sbjct: 180 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRNDRFVPEKVSLVEGEK 231
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + CG HT ++ + +T+G + GQLGHG + L P +V+ L
Sbjct: 232 ---MVLIACGWRHTITVSS--------SGILYTYGWSKYGQLGHGDFEDHLFPHKVEALK 280
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI---SPILISG 305
+ G HT ++S G ++ WG K + AGD++ SP+ +
Sbjct: 281 DS-STSQISGGWRHTMALTSDGKLYGWGWNK---------FGQVGAGDSVDHCSPVQV-- 328
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q QVACG HT+ T+ +++WGRG SG LG G+ +D P ++
Sbjct: 329 ---MFPAEQKVAQVACGWRHTLAYTEK-KNVFAWGRGTSGQLGHGEIVDRNKPLMI 380
>gi|157127963|ref|XP_001661249.1| hect E3 ubiquitin ligase [Aedes aegypti]
gi|108882309|gb|EAT46534.1| AAEL002306-PA [Aedes aegypti]
Length = 4837
Score = 104 bits (260), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG + G + ++ P + V
Sbjct: 2979 VKKVAVHSGGKHAMALTLDGKVFSWGE---GEDGKLGHGNRLTLEKPKLIESLRTKRVRD 3035
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK++ T
Sbjct: 3036 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNCTQLKPKLVTTLQGHR--- 3084
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + E + +++G G+ G+LG G ++ VP QV+ L V
Sbjct: 3085 VVQVACGSRDAQTLCLTE------EGLVFSWGDGDFGKLGRGGSEGCSVPHQVERL-NSV 3137
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ ++CG + ++ +G+VW+WG KG LG + + + +PI
Sbjct: 3138 GVMQIECGAQFSLALTKSGEVWTWG--KGDYYRLGHGTDQHVRKP------TPI------ 3183
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T+ P +VL
Sbjct: 3184 -QGLRGKKVIHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGSGNTVVNKKPNLVL 3236
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 129/294 (43%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + S P + G V+
Sbjct: 4024 IKKVAVNSGGKHCLALSSDGEVFSWGE---GEDGKLGHGNRDSYDRPKLIEALSGIGVID 4080
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H + S G +WG G+LG GD E +L+PK++E +
Sbjct: 4081 IACGSAHSACITSQGHVL--------TWGKGRYGRLGHGDSEDQLQPKLVEAL---LGYR 4129
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4130 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKIPMKIESLAG-L 4182
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4183 GVIKVECGSQFSVALTRSGSVYTWG--KGDYHRLGHGNTDHVRRPKKVAAL--------- 4231
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4232 -QGKKI---ISIATGSLHCVACSDSG-EVFTWGDNDEGQLGDGTVTAIQRPRLV 4280
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 112/239 (46%), Gaps = 35/239 (14%)
Query: 127 HTVVK---VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
H ++K V G +H +AL S GE + SWG +G+LG G+R+S RPK+IE
Sbjct: 4021 HVIIKKVAVNSGGKHCLALSSDGEVF--------SWGEGEDGKLGHGNRDSYDRPKLIEA 4072
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
S V ++ CGS H+A +T + T+G G G+LGHG ++ L P+
Sbjct: 4073 L---SGIGVIDIACGSAHSACITS--------QGHVLTWGKGRYGRLGHGDSEDQLQPKL 4121
Query: 244 VKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+ L Y + ++ G T ++ +VWSWG + G L R + P+
Sbjct: 4122 VEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG-DGDYG-----KLGRGGSDGCKIPMK 4175
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
I G ++V CG+ +V +T G +++WG+G LG G T P V
Sbjct: 4176 IESLAGLG-----VIKVECGSQFSVALTRSG-SVYTWGKGDYHRLGHGNTDHVRRPKKV 4228
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 124/265 (46%), Gaps = 42/265 (15%)
Query: 106 TEGG--FSLVSS----FTPSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCY 157
T GG FSL S+ P G VV++A C +HV+ L SA E +
Sbjct: 539 TTGGQVFSLHSNSSENIAPKAFEGLEGVHVVQIAAHCEGKHVMVLSSANEVW-------- 590
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
SWGA + G+LG GD S+ P +I ++ +Y CG+ ++A +T +
Sbjct: 591 SWGAGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIY---CGASYSAAIT--------IAG 639
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G G G+LGHG + LVP QV+ L Y V V++ G H+ V+ G +++WG
Sbjct: 640 ELFTWGRGTYGRLGHGNSDDKLVPTQVQALKSYKVVDVALGSGDAHSMCVTDNGLLFAWG 699
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ G N S SPI + + + ++ G+ +V ++ DG L
Sbjct: 700 -DGDFGKLGNGSCNG-------SPIPVQID-----TLVNVSRIYSGSQFSVALSCDG-TL 745
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG+G G LG G + P +V
Sbjct: 746 YTWGKGHGGRLGHGNSEHSNVPKLV 770
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 28/203 (13%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 209
+D Y+ G NG+LGLG + P+ + NQ + V +V G H LT
Sbjct: 2942 QDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQ---YVVKKVAVHSGGKHAMALT--- 2995
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
L+ +++G GE+G+LGHG + P+ ++ L + + + CG H++ ++S+
Sbjct: 2996 -----LDGKVFSWGEGEDGKLGHGNRLTLEKPKLIESL-RTKRVRDIACGSSHSAAITSS 3049
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTV 327
G++++WG+ + L + + P L++ H VQVACG+ A T+
Sbjct: 3050 GELYTWGLGE------YGRLGHGDNCTQLKPKLVTTLQGH-----RVVQVACGSRDAQTL 3098
Query: 328 LVTDDGYKLWSWGRGRSGVLGTG 350
+T++G ++SWG G G LG G
Sbjct: 3099 CLTEEGL-VFSWGDGDFGKLGRG 3120
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 114/263 (43%), Gaps = 39/263 (14%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
G + + +A +W WG D G VS P+ + H V + CG+ +
Sbjct: 577 GKHVMVLSSANEVWSWG---AGDGGRLGHGDTVSKEHPTMIVGLHEKQVCGIYCGASYSA 633
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS- 199
A+ AGE ++WG G+LG G+ + +L P ++ + V +V GS
Sbjct: 634 AITIAGE--------LFTWGRGTYGRLGHGNSDDKLVPTQVQALKS---YKVVDVALGSG 682
Query: 200 -FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
H+ +T + + +G G+ G+LG+G+ + +P Q+ L V + +
Sbjct: 683 DAHSMCVTD--------NGLLFAWGDGDFGKLGNGSCNGSPIPVQIDTL---VNVSRIYS 731
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
G + +S G +++WG KG G L + + P L+ G K D
Sbjct: 732 GSQFSVALSCDGTLYTWG--KGHG----GRLGHGNSEHSNVPKLV--RALEGKKIAD--- 780
Query: 319 VACGAAHTVLVTDDGYKLWSWGR 341
VA G+AH + +T G +L+ WGR
Sbjct: 781 VAVGSAHCLALTSSG-ELYGWGR 802
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 67/266 (25%), Positives = 110/266 (41%), Gaps = 52/266 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTV 129
++C + G S AI AG L+ WG T G +S P+ V + V
Sbjct: 621 QVCGIYCGASYSAAITIAGELFTWGR------GTYGRLGHGNSDDKLVPTQVQALKSYKV 674
Query: 130 VKVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V VA GS H + + G + ++WG + G+LG G P I+T
Sbjct: 675 VDVALGSGDAHSMCVTDNG--------LLFAWGDGDFGKLGNGSCNGSPIPVQIDTLVN- 725
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V + GS + L+ + +T+G G G+LGHG ++ + VP+ V+ L
Sbjct: 726 ----VSRIYSGSQFSVALS--------CDGTLYTWGKGHGGRLGHGNSEHSNVPKLVRAL 773
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + V G H ++S+G+++ WG +CP +G + PI+
Sbjct: 774 -EGKKIADVAVGSAHCLALTSSGELYGWGRNDYQQICP--------SGVSRDPII----- 819
Query: 308 PHGPKFQDPVQV-----ACGAAHTVL 328
H P P + CGAA +++
Sbjct: 820 -HSPILTTPPTLRISGMTCGAAQSIV 844
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 78/190 (41%), Gaps = 23/190 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V+KV CGS+
Sbjct: 4137 SGDAQTLCITDDDNVWSWGD---GDYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF 4193
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G+ + RPK + + + G
Sbjct: 4194 SVALTRSGSV--------YTWGKGDYHRLGHGNTDHVRRPKKVAALQGKK---IISIATG 4242
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + D E W G + GQLG GT + P V+ L Q ++V V C
Sbjct: 4243 SLHCVACS------DSGEVFTW--GDNDEGQLGDGTVTAIQRPRLVQSL-QGKHIVKVIC 4293
Query: 259 GLFHTSVVSS 268
G HT +S+
Sbjct: 4294 GSAHTLALST 4303
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 90/205 (43%), Gaps = 26/205 (12%)
Query: 159 WGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG N+ QLG G + S+++ P +Q P + GS +++ +
Sbjct: 2897 WGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKP---IHIAGGSKSLFIVSQ--------DG 2944
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSWG 276
+ G G NG+LG G + P QV L QYV V+V G H ++ G V+SWG
Sbjct: 2945 KLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWG 3004
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ L LT + P LI + +D +ACG++H+ +T G +L
Sbjct: 3005 EGEDGKLGHGNRLTLEK------PKLI--ESLRTKRVRD---IACGSSHSAAITSSG-EL 3052
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G G LG G P +V
Sbjct: 3053 YTWGLGEYGRLGHGDNCTQLKPKLV 3077
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ GQLG D P E + P ++ G +T P+ L
Sbjct: 3940 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRP---IQIAGGEQTLYAVT----PDGKL- 3991
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S P V+ L Q+V + V+V+ G H +SS G+V+S
Sbjct: 3992 ---YATGYGAGGRLGIGGTDSVSAPTLVESL-QHVIIKKVAVNSGGKHCLALSSDGEVFS 4047
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG S R + +A+S I + + +ACG+AH+ +T
Sbjct: 4048 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGV-------------IDIACGSAHSACITSQ 4094
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4095 GHVL-TWGKGRYGRLGHGDSEDQLQPKLV 4122
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ ++G ++ WG+ D +G + V + P+ V G V +V
Sbjct: 3190 KVIHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGSGNTVVNKKPNLVLGLDGVFVNRV 3246
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3247 ACGSSHSVA 3255
>gi|338533363|ref|YP_004666697.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337259459|gb|AEI65619.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1379
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 128/312 (41%), Gaps = 55/312 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + T+ P+++ ++ AG + ++A+ G +W WG L D +T
Sbjct: 1109 LGDGTTTHRATPVQVQGLTGVIAIAAGSLHTVALRQDGTVWAWGRNSWGQLGDGTT---- 1164
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V G V+ +A GS H VAL +D ++WG N+ GQLG G
Sbjct: 1165 --THRATPVQVQGLTG--VIAIAAGSLHTVALR--------QDGTVWAWGFNDLGQLGDG 1212
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
RL P ++ V + G FHTA + + WT+G GQL
Sbjct: 1213 TTTRRLTPAQVQGLT-----GVTTIAAGYFHTAAVRQ--------DGTAWTWGFNLWGQL 1259
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT P QV+ L L G HT VV G VW+WG G L +S
Sbjct: 1260 GDGTFTDRATPVQVQGLTGVSALA---AGYAHTVVVGEDGTVWAWGNNSGTQLGNGSSTD 1316
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R+ +P+ + +A G HTV ++ DG W WGR G +G G
Sbjct: 1317 RS------TPVQVE-------ALTGAFSLAAGRFHTVAMSPDGAG-WGWGRNNLGQVGDG 1362
Query: 351 KTIDFFAPAIVL 362
T D P V+
Sbjct: 1363 TTADRPTPVNVM 1374
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 91/321 (28%), Positives = 131/321 (40%), Gaps = 57/321 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + P+++ ++ AG ++A+ G +W WG L D +T
Sbjct: 1059 LGDGTTAQSLTPVQVQGLTGVTAISAGDAHTVALRRDGTVWAWGRNSWGQLGDGTT---- 1114
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V G V+ +A GS H VAL +D ++WG N+ GQLG G
Sbjct: 1115 --THRATPVQVQGLTG--VIAIAAGSLHTVALR--------QDGTVWAWGRNSWGQLGDG 1162
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R P ++ V + GS HT L + W +G + GQL
Sbjct: 1163 TTTHRATPVQVQGLT-----GVIAIAAGSLHTVALRQ--------DGTVWAWGFNDLGQL 1209
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GTT L P QV+ L + ++ G FHT+ V G W+WG G + + T
Sbjct: 1210 GDGTTTRRLTPAQVQGL---TGVTTIAAGYFHTAAVRQDGTAWTWGFNL-WGQLGDGTFT 1265
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
D +P+ + G +A G AHTV+V +DG +W+WG LG G
Sbjct: 1266 -----DRATPVQVQG-------LTGVSALAAGYAHTVVVGEDG-TVWAWGNNSGTQLGNG 1312
Query: 351 KTIDFFAPAIVLWPPLTEEFK 371
+ D P V LT F
Sbjct: 1313 SSTDRSTPVQV--EALTGAFS 1331
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 119/291 (40%), Gaps = 43/291 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VV 130
+ + ++ AGG A G LW WG L GG L S TP V G T V
Sbjct: 975 MSVTAMAAGGYHMAAAGQDGTLWTWG---LNSYGQLGGGPLSQSLTPVQV-QVQGLTGVA 1030
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A G H +A+ +D +SWG N GQLG G L P ++
Sbjct: 1031 AIAAGFSHTLAVR--------QDGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGLT----- 1077
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++ G HT L R+ + W +G GQLG GTT P QV+ L
Sbjct: 1078 GVTAISAGDAHTVAL--RR------DGTVWAWGRNSWGQLGDGTTTHRATPVQVQGL--- 1126
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++++ G HT + G VW+WG G + + T +P+ + G
Sbjct: 1127 TGVIAIAAGSLHTVALRQDGTVWAWGRNS-WGQLGDGTTTHRA-----TPVQVQG----- 1175
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +A G+ HTV + DG +W+WG G LG G T PA V
Sbjct: 1176 --LTGVIAIAAGSLHTVALRQDG-TVWAWGFNDLGQLGDGTTTRRLTPAQV 1223
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 115/291 (39%), Gaps = 49/291 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I ++ A ++++A+ G +W WG+ L D +T TP V G V
Sbjct: 473 ITAIAASNLLTVAVRQDGTVWAWGDNARGQLGDGTT------TRRLTPVQVQGLAG--VT 524
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA H+VA+ +D ++WG GQLG G R P ++
Sbjct: 525 AVAASDYHLVAVR--------QDGTVWAWGVGFWGQLGDGTGMDRSTPVQVQGLT----- 571
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + GS HT L + W +G GQLG GTT L P QV P
Sbjct: 572 GVTAIAAGSNHTVALRQ--------DGTVWAWGFNNYGQLGDGTTAGHLTPVQV---PGV 620
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V++ G HT + G VW+WG G + + T SP+ + G
Sbjct: 621 TGAVAIAAGGSHTVALLQDGTVWTWGYNI-WGQLGDGTTTHRH-----SPVQVQG----- 669
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + +A HTV V DG +W+WG SG LG G T P V
Sbjct: 670 --LADVIAIATNNGHTVAVRQDG-TVWTWGLNSSGQLGDGTTTQRLTPVQV 717
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 118/290 (40%), Gaps = 41/290 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + ++ AGG A G LW WG L GG L P V +V
Sbjct: 925 MDVTAMAAGGYHMAAAGQDGTLWTWG---LNSYGQLGGGPLSYRLLPVQVQGLM--SVTA 979
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H+ A G+D ++WG N+ GQLG G L P ++
Sbjct: 980 MAAGGYHMAA--------AGQDGTLWTWGLNSYGQLGGGPLSQSLTPVQVQVQGLT---G 1028
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + G HT L R+ + W++G GQLG GTT +L P QV+ L
Sbjct: 1029 VAAIAAGFSHT--LAVRQ------DGTVWSWGGNAYGQLGDGTTAQSLTPVQVQGL---T 1077
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++ G HT + G VW+WG G + + T +P+ + G
Sbjct: 1078 GVTAISAGDAHTVALRRDGTVWAWGRNS-WGQLGDGTTTHRA-----TPVQVQG------ 1125
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +A G+ HTV + DG +W+WGR G LG G T P V
Sbjct: 1126 -LTGVIAIAAGSLHTVALRQDG-TVWAWGRNSWGQLGDGTTTHRATPVQV 1173
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 120/311 (38%), Gaps = 55/311 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + T P+++ ++ AGG ++A+ G LW WG+ L + +T G
Sbjct: 253 LGDGTTTVRFTPVQVLGLTGVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFG-- 310
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S+ P V G V +A H VAL +D ++WG N++GQLG G
Sbjct: 311 ----SYRPEQVQGLTG--VTAIAASGIHTVALR--------QDGTLWAWGNNSSGQLGDG 356
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R P ++ V + G +T + W +G E GQL
Sbjct: 357 TTTVRFTPVQVQGLT-----GVTAIAAGYLYTVASKQ--------DGTVWAWGDNEWGQL 403
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GTT L P QV+ L + ++ G +T G VW+WG K L A
Sbjct: 404 GDGTTTRRLTPVQVQGL---TGVTAIAAGYLYTVASKQDGTVWAWGDNKRSQLGEGAVSQ 460
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R+ G+ + +A TV V DG +W+WG G LG G
Sbjct: 461 RHTPGEV-------------QGLEGITAIAASNLLTVAVRQDG-TVWAWGDNARGQLGDG 506
Query: 351 KTIDFFAPAIV 361
T P V
Sbjct: 507 TTTRRLTPVQV 517
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 109/293 (37%), Gaps = 51/293 (17%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFH 125
AP G +LA+ G +W WGN L D +T FS V T +
Sbjct: 70 AAPAGPVLAAGNGNHTLAVRQDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMTGA------ 123
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
+A G H VA +D ++WG N++GQLG G R P ++
Sbjct: 124 ----TAIAAGIYHTVA--------ASQDGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGLT 171
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V V G H+A L WT+G GQLG GT+ L P QV+
Sbjct: 172 -----GVTAVAAGRNHSAALGQ--------GGTVWTWGDNLVGQLGDGTSTQRLTPVQVQ 218
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L + + + D T + G VW+WG L + R +P+ + G
Sbjct: 219 GLTGVIAISANDS---ETVALRQDGTVWAWGNNSSGQLGDGTTTVR------FTPVQVLG 269
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+A G V + DG LW+WG G LG G T + P
Sbjct: 270 -------LTGVTAIAAGGGFAVALRQDG-TLWAWGSNSRGQLGNGTTFGSYRP 314
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 127/312 (40%), Gaps = 55/312 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + H P+++ ++ AGG ++A+ G +W WG L D +T
Sbjct: 603 LGDGTTAGHLTPVQVPGVTGAVAIAAGGSHTVALLQDGTVWTWGYNIWGQLGDGTT---- 658
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ SPV V+ +A + H VA+ +D ++WG N++GQLG G
Sbjct: 659 ----THRHSPVQVQGLADVIAIATNNGHTVAVR--------QDGTVWTWGLNSSGQLGDG 706
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQ 229
RL P + TA+LT + M + W +G GQ
Sbjct: 707 TTTQRLTPVQVHGLTD--------------ATAILTSSSQTVAMRQDRTLWAWGDNHWGQ 752
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GTT L P QV+ L + + ++ G +H + G +W+WG+ G L
Sbjct: 753 LGDGTTTRRLTPVQVQGL---MDVTAMAAGGYHMAAAGQDGTLWTWGLNS-YGQLGGGPL 808
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ + P+ + G +A G +HTV V DG +W+WG SG LG
Sbjct: 809 SYR-----LLPVQV-----QGLTSATATAIAAGDSHTVAVRQDG-TVWAWGSNFSGQLGD 857
Query: 350 GKTIDFFAPAIV 361
G T P V
Sbjct: 858 GTTAQSLTPVQV 869
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 123/325 (37%), Gaps = 67/325 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ A G+ ++A+ G LW WGN S G + FTP V G V +A
Sbjct: 323 VTAIAASGIHTVALRQDGTLWAWGNN---SSGQLGDGTTTVRFTPVQVQGLTG--VTAIA 377
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-------- 185
G + VA +D ++WG N GQLG G RL P ++
Sbjct: 378 AGYLYTVA--------SKQDGTVWAWGDNEWGQLGDGTTTRRLTPVQVQGLTGVTAIAAG 429
Query: 186 --------QD-SPWAVYEVTCGSFHTALLTHRKRPNDM--LESM---------------- 218
QD + WA + ++ R P ++ LE +
Sbjct: 430 YLYTVASKQDGTVWAWGDNKRSQLGEGAVSQRHTPGEVQGLEGITAIAASNLLTVAVRQD 489
Query: 219 --CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W +G GQLG GTT L P QV+ L + + D +H V G VW+WG
Sbjct: 490 GTVWAWGDNARGQLGDGTTTRRLTPVQVQGLAGVTAVAASD---YHLVAVRQDGTVWAWG 546
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ L + R+ +P+ + G +A G+ HTV + DG +
Sbjct: 547 VGFWGQLGDGTGMDRS------TPVQVQG-------LTGVTAIAAGSNHTVALRQDG-TV 592
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
W+WG G LG G T P V
Sbjct: 593 WAWGFNNYGQLGDGTTAGHLTPVQV 617
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 118/300 (39%), Gaps = 55/300 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D + + P+++ ++ AG ++A+ G +W WG L D +T G
Sbjct: 553 LGDGTGMDRSTPVQVQGLTGVTAIAAGSNHTVALRQDGTVWAWGFNNYGQLGDGTTAG-- 610
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V G V +A G H VAL+ +D ++WG N GQLG G
Sbjct: 611 ----HLTPVQVPGVTG--AVAIAAGGSHTVALL--------QDGTVWTWGYNIWGQLGDG 656
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R P ++ V + + HT + + WT+GL +GQL
Sbjct: 657 TTTHRHSPVQVQGLAD-----VIAIATNNGHTVAVRQ--------DGTVWTWGLNSSGQL 703
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GTT L P QV L +++ T + +W+WG + G + + T
Sbjct: 704 GDGTTTQRLTPVQVHGLTDATAILTSSS---QTVAMRQDRTLWAWG-DNHWGQLGDGTTT 759
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R ++P+ + G D +A G H DG LW+WG G LG G
Sbjct: 760 RR-----LTPVQVQG-------LMDVTAMAAGGYHMAAAGQDG-TLWTWGLNSYGQLGGG 806
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 85/343 (24%), Positives = 125/343 (36%), Gaps = 71/343 (20%)
Query: 60 LEDDSKTNHKAPIKI----CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
L D + T +P+++ ++ AG ++A G +W WG S G + +
Sbjct: 105 LGDGTTTRRFSPVQVMTGATAIAAGIYHTVAASQDGTVWTWGRN---SSGQLGDGTSIQR 161
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F+P V G V VA G H AL G+ ++WG N GQLG G R
Sbjct: 162 FSPVQVQGLTG--VTAVAAGRNHSAAL--------GQGGTVWTWGDNLVGQLGDGTSTQR 211
Query: 176 LRPKIIE----------------TFNQD-SPWAVYEVTCGSFHTALLTHRKRPNDML--- 215
L P ++ QD + WA + G T R P +L
Sbjct: 212 LTPVQVQGLTGVIAISANDSETVALRQDGTVWAWGNNSSGQLGDGTTTVRFTPVQVLGLT 271
Query: 216 -----------------ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
+ W +G GQLG+GTT + PEQV+ L + ++
Sbjct: 272 GVTAIAAGGGFAVALRQDGTLWAWGSNSRGQLGNGTTFGSYRPEQVQGL---TGVTAIAA 328
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
HT + G +W+WG L + R +P+ + G
Sbjct: 329 SGIHTVALRQDGTLWAWGNNSSGQLGDGTTTVR------FTPVQVQG-------LTGVTA 375
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G +TV DG +W+WG G LG G T P V
Sbjct: 376 IAAGYLYTVASKQDG-TVWAWGDNEWGQLGDGTTTRRLTPVQV 417
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 93/211 (44%), Gaps = 32/211 (15%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D ++WG N++GQLG G R P + T + G +HT +
Sbjct: 90 QDGTVWAWGNNDDGQLGDGTTTRRFSPVQVMT-------GATAIAAGIYHTVAASQ---- 138
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ WT+G +GQLG GT+ P QV+ L + +V G H++ + G
Sbjct: 139 ----DGTVWTWGRNSSGQLGDGTSIQRFSPVQVQGL---TGVTAVAAGRNHSAALGQGGT 191
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW+WG + +G + + T+ ++P+ + G + ++ + TV +
Sbjct: 192 VWTWG-DNLVGQLGDGTSTQR-----LTPVQVQG-------LTGVIAISANDSETVALRQ 238
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
DG +W+WG SG LG G T F P VL
Sbjct: 239 DG-TVWAWGNNSSGQLGDGTTTVRFTPVQVL 268
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 115/308 (37%), Gaps = 45/308 (14%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P+++ ++ AGG A G LW WG L GG L
Sbjct: 753 LGDGTTTRRLTPVQVQGLMDVTAMAAGGYHMAAAGQDGTLWTWG---LNSYGQLGGGPLS 809
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V T +A G H VA+ +D ++WG+N +GQLG G
Sbjct: 810 YRLLPVQVQGLTSATATAIAAGDSHTVAVR--------QDGTVWAWGSNFSGQLGDGTTA 861
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
L P ++ V + G +H A + WT+GL GQLG G
Sbjct: 862 QSLTPVQVQVQGLMD---VTAMAAGGYHMAAAGQ--------DGTLWTWGLNSYGQLGGG 910
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
L+P QV+ L + + ++ G +H + G +W+WG+ G L+
Sbjct: 911 PLSYRLLPVQVQGL---MDVTAMAAGGYHMAAAGQDGTLWTWGLNS-YGQLGGGPLSYR- 965
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ P+ + G +A G H DG LW+WG G LG G
Sbjct: 966 ----LLPVQVQG-------LMSVTAMAAGGYHMAAAGQDG-TLWTWGLNSYGQLGGGPLS 1013
Query: 354 DFFAPAIV 361
P V
Sbjct: 1014 QSLTPVQV 1021
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 116/300 (38%), Gaps = 51/300 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + T P+++ ++ ++A+ LW WG+ L D +T
Sbjct: 703 LGDGTTTQRLTPVQVHGLTDATAILTSSSQTVAMRQDRTLWAWGDNHWGQLGDGTT---- 758
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V V +A G H+ A G+D ++WG N+ GQLG G
Sbjct: 759 --TRRLTPVQVQGLM--DVTAMAAGGYHMAA--------AGQDGTLWTWGLNSYGQLGGG 806
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
RL P ++ + + G HT + + W +G +GQL
Sbjct: 807 PLSYRLLPVQVQGLTSAT---ATAIAAGDSHTVAVRQ--------DGTVWAWGSNFSGQL 855
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GTT +L P QV ++ + + ++ G +H + G +W+WG+ G L+
Sbjct: 856 GDGTTAQSLTPVQV-QVQGLMDVTAMAAGGYHMAAAGQDGTLWTWGLNS-YGQLGGGPLS 913
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ P+ + G D +A G H DG LW+WG G LG G
Sbjct: 914 YR-----LLPVQVQG-------LMDVTAMAAGGYHMAAAGQDG-TLWTWGLNSYGQLGGG 960
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT V G VW+WG G + + TR SP+ + +A
Sbjct: 84 HTLAVRQDGTVWAWGNNDD-GQLGDGTTTRR-----FSPVQV---------MTGATAIAA 128
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HTV + DG +W+WGR SG LG G +I F+P V
Sbjct: 129 GIYHTVAASQDG-TVWTWGRNSSGQLGDGTSIQRFSPVQV 167
>gi|66810824|ref|XP_639119.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60467743|gb|EAL65761.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2083
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/433 (25%), Positives = 178/433 (41%), Gaps = 93/433 (21%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-------WDFH 125
KI ++ AG ++ + +G L+ +G D G S VS P+ +
Sbjct: 1327 KIQAIAAGFAHTIVLKKSGELYSFG---YGDQGQLGHGSFVSKSIPTRIELNTIVGIQHG 1383
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G + ++ACG H V GE YSWG GQLG G+ ES RP++IE
Sbjct: 1384 GGKITQIACGFGHSVICSDNGE--------VYSWGLGKQGQLGHGNYESIARPRLIEALK 1435
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V +++CG F+T T K +++GLGE+ +LGHG+ ++ P V
Sbjct: 1436 -----GVTKISCGHFYTMATTDLKN--------VYSWGLGEHMKLGHGSDKNEATPRVVD 1482
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG------LGLCP-------------- 285
Q + + CGL HT ++ GD+ + + + L P
Sbjct: 1483 FFIQ-KNVSKIVCGLNHTITLTYPGDLNNNSLSNDDDVNDFIDLAPSTSNSSSSSSLTND 1541
Query: 286 -----NASLTRNEAGDAISPILISGNGPHG----------PKFQDP-------------V 317
+ L NE +SPI G G HG P F P +
Sbjct: 1542 NNNGRSGRLGLNE-NSQVSPIYACGAGEHGKLGLGGDLKSPFFDKPIPTAIKGVNALNLI 1600
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE-EFKQDELN 376
++CG T ++T +G L+ WG G G +G GKT D + P + PLT+ + Q L
Sbjct: 1601 DISCGTDFTAMITSNG-ALYVWGYGNFGQIGNGKTDDAWVPIRI---PLTDSKANQSSLQ 1656
Query: 377 TGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERY--ASILHGSIFGKPFAA 434
+ D++ + EG E+ + +L +K E Y A++++ I G P +
Sbjct: 1657 S---DNKKQRYSQEGLEDILRSNVHSYRPFHIL-NKAKQFENYDIAAVIY-DILGDPIST 1711
Query: 435 EQDIPISLKDMGF 447
+ +SL+ F
Sbjct: 1712 LEYRLLSLEKKNF 1724
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 111/234 (47%), Gaps = 25/234 (10%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--PKIIETFNQD 187
+KV+CG +HV + +GE ++WG N +GQLG G +++ PK +E F
Sbjct: 1221 IKVSCGWDHVALISESGE--------LFTWGKNQSGQLGHGLDIGKIQTTPKRLEFFRGK 1272
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
SP + V CG H+ + + + +++G + GQLGHGT + ++ E
Sbjct: 1273 SP--IIMVECGGEHSICVDS--------DYVVYSWGQDKFGQLGHGTKSVSQNRPKIIED 1322
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ ++ G HT V+ +G+++S+G G + S I I G
Sbjct: 1323 ISGQKIQAIAAGFAHTIVLKKSGELYSFGYGDQ-GQLGHGSFVSKSIPTRIELNTIVGIQ 1381
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K Q+ACG H+V+ +D+G +++SWG G+ G LG G P ++
Sbjct: 1382 HGGGKI---TQIACGFGHSVICSDNG-EVYSWGLGKQGQLGHGNYESIARPRLI 1431
>gi|356512860|ref|XP_003525133.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 437
Score = 104 bits (259), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 118/249 (47%), Gaps = 37/249 (14%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
S P + F + VA G+EH VA+ G Y WG G LGLGDR
Sbjct: 159 SLLPQKIQIFEEIPIKMVAAGAEHSVAITKDGN--------LYGWGWGRYGNLGLGDRND 210
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
RL P+ + T + D + V CG HT ++ +T G G+ GQLGHG
Sbjct: 211 RLLPEKV-TVDGDK---MAMVACGWRHTICVSS--------SGGLYTNGWGKYGQLGHGD 258
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRN 292
+ LVP +V+ L ++ V G H+ ++S+G + WG K +G+ N
Sbjct: 259 FEDHLVPRKVQALSDK-FISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNF----- 312
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
D SP+ + N PH K Q ++CG HT+ VT+ ++SWGRG +G LG G+T
Sbjct: 313 ---DCCSPMQV--NFPHDQKVQ---MISCGWRHTIAVTER-ENVYSWGRGANGQLGNGET 363
Query: 353 IDFFAPAIV 361
ID P I+
Sbjct: 364 IDRNVPTII 372
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 114/236 (48%), Gaps = 37/236 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QD 187
V+ V+ G+ H VAL+S ++VC SWG +GQLG GD + RL P + + QD
Sbjct: 16 VLLVSAGASHSVALLSG-------NVVC-SWGRGEDGQLGHGDTDDRLFPTKLSALDGQD 67
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ VTCG+ HT + R +++G G+ G+LGHG L+P +K L
Sbjct: 68 ----IICVTCGADHTMARSESGRD-------VYSWGWGDFGRLGHGDHSDLLIPHPIKAL 116
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q + + + CG H V+ V SWG + N L A D++ P I
Sbjct: 117 -QGLMIQQIACGDSHCLAVTMDSQVLSWGRNQ------NGELGLGTAEDSLLPQKIQ--- 166
Query: 308 PHGPKFQD-PVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F++ P++ VA GA H+V +T DG L+ WG GR G LG G D P V
Sbjct: 167 ----IFEEIPIKMVAAGAEHSVAITKDG-NLYGWGWGRYGNLGLGDRNDRLLPEKV 217
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 79/314 (25%), Positives = 139/314 (44%), Gaps = 42/314 (13%)
Query: 60 LEDDSKTNHKAP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP 118
+ED+ + AP ++ V AG S+A+ + + WG + G P
Sbjct: 1 MEDEVMSEVAAPPRRVLLVSAGASHSVALLSGNVVCSWGR---GEDGQLGHGDTDDRLFP 57
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+ + G ++ V CG++H +A +G YSWG + G+LG GD L P
Sbjct: 58 TKLSALDGQDIICVTCGADHTMARSESGRD-------VYSWGWGDFGRLGHGDHSDLLIP 110
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
I+ + ++ CG H +T ++S ++G +NG+LG GT + +
Sbjct: 111 HPIKALQG---LMIQQIACGDSHCLAVT--------MDSQVLSWGRNQNGELGLGTAEDS 159
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGD 296
L+P+++ ++ + + + V G H+ ++ G++ W WG LGL + D
Sbjct: 160 LLPQKI-QIFEEIPIKMVAAGAEHSVAITKDGNLYGWGWGRYGNLGL--------GDRND 210
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ P ++ +G VACG HT+ V+ G L++ G G+ G LG G D
Sbjct: 211 RLLPEKVTVDG------DKMAMVACGWRHTICVSSSG-GLYTNGWGKYGQLGHGDFEDHL 263
Query: 357 APAIVLWPPLTEEF 370
P V L+++F
Sbjct: 264 VPRKV--QALSDKF 275
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 47/114 (41%), Gaps = 11/114 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G S+A+ ++G L WG F S P V H V ++
Sbjct: 276 ISQVSGGWRHSMALTSSGQLLGWGWNKFGQIGVGNNFDCCS---PMQVNFPHDQKVQMIS 332
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
CG H +A+ E YSWG NGQLG G+ R P IIE F+ D
Sbjct: 333 CGWRHTIAVT--------ERENVYSWGRGANGQLGNGETIDRNVPTIIEAFSVD 378
>gi|338534909|ref|YP_004668243.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337261005|gb|AEI67165.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 862
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/315 (29%), Positives = 129/315 (40%), Gaps = 55/315 (17%)
Query: 56 APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSST 106
A L D + + + P++I ++ AG +LA GA+W WG L D +T
Sbjct: 538 ASGQLGDGATIDRRIPVQIPGLAGVTAIAAGSAHTLAAGQDGAVWSWGANSYGQLGDGTT 597
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
+P V G V +A G H VAL+ +D +WG N+ GQ
Sbjct: 598 ------THRLSPVQVPGLTG--VSAMAAGDAHSVALL--------QDGTVSAWGRNSWGQ 641
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG G +RL P + V V GS HT L + W +G +
Sbjct: 642 LGDGTTAARLTPVQVHGLT-----GVTAVAAGSLHTVALRQ--------DGTVWAWGYND 688
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
GQLG GTT L P QV+ L + ++ G FHT V G VW+WG L
Sbjct: 689 LGQLGDGTTTRRLAPVQVQGLTD---VTAIAAGYFHTVAVRQDGTVWAWGYNLWGQLGDG 745
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
+S R+ +P+ + + +A G AHTV V DG +W+WG
Sbjct: 746 SSTARS------TPVQVQ-------ELTGVSALAAGYAHTVAVKQDG-TVWAWGNNSGTQ 791
Query: 347 LGTGKTIDFFAPAIV 361
LG G + D + P V
Sbjct: 792 LGNGSSTDRYTPVWV 806
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 130/315 (41%), Gaps = 51/315 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D ++TN P+++ ++ AG +LA+ G +W WGN L G +
Sbjct: 189 LGDGTRTNRLTPVQVPGLTGVTAIAAGDYHTLAVRQDGTVWAWGNNAL---GQLGDGTYT 245
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP V G V ++ G H VA+ +D ++WG N GQLG G R
Sbjct: 246 ERLTPVQVPGLTG--VTAISAGESHTVAVR--------QDGTVWAWGDNVWGQLGDGTRT 295
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P + + V + G HT + + W +GL GQLG G
Sbjct: 296 DRLTPVQVPGLS-----GVTAIAEGRRHTFAVRQ--------DGTVWAWGLNFWGQLGDG 342
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T L P QV P + ++ G +HT V G VW+WG + G + + T
Sbjct: 343 TRSDRLTPVQV---PDLTSVTAIAAGDYHTLAVRQDGTVWAWG-DNVWGQLGDGTYT--- 395
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D ++P+ + P +A G +HTV + DG +W+WG G LG G
Sbjct: 396 --DRLTPVQV-------PGLTGVTAIAAGESHTVAMRQDG-TVWAWGDNVWGQLGDGTYT 445
Query: 354 DFFAPAIVLWPPLTE 368
D P V P LT
Sbjct: 446 DRLTPVQV--PDLTS 458
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 90/313 (28%), Positives = 129/313 (41%), Gaps = 57/313 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + T+ +P+++ ++ AG S+A+ G + WG L D +T
Sbjct: 592 LGDGTTTHRLSPVQVPGLTGVSAMAAGDAHSVALLQDGTVSAWGRNSWGQLGDGTT---- 647
Query: 111 SLVSSFTPSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ TP V HG T V VA GS H VAL +D ++WG N+ GQLG
Sbjct: 648 --AARLTPVQV---HGLTGVTAVAAGSLHTVALR--------QDGTVWAWGYNDLGQLGD 694
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G RL P ++ V + G FHT + + W +G GQ
Sbjct: 695 GTTTRRLAPVQVQGLTD-----VTAIAAGYFHTVAVRQ--------DGTVWAWGYNLWGQ 741
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG G++ + P QV+EL L G HT V G VW+WG G L +S
Sbjct: 742 LGDGSSTARSTPVQVQELTGVSALA---AGYAHTVAVKQDGTVWAWGNNSGTQLGNGSST 798
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
R +P+ + G + G HT V+ +G+ W+WGR G +G
Sbjct: 799 DR------YTPVWVEG-------LTGVSALTAGRFHTAAVSPEGFG-WAWGRNNFGQVGD 844
Query: 350 GKTIDFFAPAIVL 362
G T D P V+
Sbjct: 845 GTTADRPRPVDVV 857
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 128/314 (40%), Gaps = 48/314 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D ++++ P+++ ++ AG +LA+ G +W WG+ G +
Sbjct: 339 LGDGTRSDRLTPVQVPDLTSVTAIAAGDYHTLAVRQDGTVWAWGDNVW---GQLGDGTYT 395
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP V G V +A G H VA+ +D ++WG N GQLG G
Sbjct: 396 DRLTPVQVPGLTG--VTAIAAGESHTVAMR--------QDGTVWAWGDNVWGQLGDGTYT 445
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P + +V + G +HT L R+ ++C +G GQLG G
Sbjct: 446 DRLTPVQVPDLT-----SVTAIAAGDYHT--LAVRQD-----GTVC-AWGFNAYGQLGDG 492
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T+ + P V L ++ G HT V G VW+WG+ L A++ R
Sbjct: 493 TSSRSPSPVMVPGLTGVTVFAALAAGDSHTVAVMQDGTVWAWGLNASGQLGDGATIDRR- 551
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
P+ I P +A G+AHT+ DG +WSWG G LG G T
Sbjct: 552 -----IPVQI-------PGLAGVTAIAAGSAHTLAAGQDG-AVWSWGANSYGQLGDGTTT 598
Query: 354 DFFAPAIVLWPPLT 367
+P V P LT
Sbjct: 599 HRLSPVQV--PGLT 610
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 112/294 (38%), Gaps = 45/294 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + AG ++A+ G W WGN G + TP V G V VA
Sbjct: 9 VTATTAGEYHTVAVRQDGTAWAWGNNAW---GQLGDGTRTDRLTPVQVPGLTG--VTAVA 63
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H A+ +D ++WG N GQLG G R P + V
Sbjct: 64 AGRHHTFAVR--------QDGTVWAWGLNVWGQLGDGTHTERHTPVQVPGLT-----GVT 110
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G HT ++ + W +G + GQLG GT P Q LP+ +
Sbjct: 111 AIAAGRRHTFAVSQ--------DGTVWAWGDNDWGQLGDGTRADRHTPVQ---LPELTGV 159
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
++ G HT V G VW+WG + G + + T ++P+ + P
Sbjct: 160 TAIAAGRRHTFAVRQDGTVWAWG-DNAWGQLGDGTRTNR-----LTPVQV-------PGL 206
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
+A G HT+ V DG +W+WG G LG G + P V P LT
Sbjct: 207 TGVTAIAAGDYHTLAVRQDG-TVWAWGNNALGQLGDGTYTERLTPVQV--PGLT 257
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 49/122 (40%), Gaps = 16/122 (13%)
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
++P + + G +HT V G W+WG G + + T D ++P+ +
Sbjct: 2 QVPGLTGVTATTAGEYHTVAVRQDGTAWAWG-NNAWGQLGDGTRT-----DRLTPVQV-- 53
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
P VA G HT V DG +W+WG G LG G + P V P
Sbjct: 54 -----PGLTGVTAVAAGRHHTFAVRQDG-TVWAWGLNVWGQLGDGTHTERHTPVQV--PG 105
Query: 366 LT 367
LT
Sbjct: 106 LT 107
>gi|383865452|ref|XP_003708187.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Megachile
rotundata]
Length = 4755
Score = 103 bits (257), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 92/334 (27%), Positives = 151/334 (45%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S ++P ++E + +K +V +GG LA+ + G
Sbjct: 3959 GRLGIGGTDSVMMPTLLESIQHVF----------------VKKVAVNSGGKHCLALSSEG 4002
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + +S P + + G +V VACG H A+ SAG
Sbjct: 4003 HVYSWGEG---DDGKLGHGNRLSYDRPKLIEELLGTEIVDVACGGHHSAAITSAG----- 4054
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD E +L PK++E QD + V +V CGS L
Sbjct: 4055 ---WLYTWGKGRYGRLGHGDSEDQLTPKLVEAL-QD--YKVIDVACGSGDAQTLCVTDDD 4108
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + VP +++ L + ++ V+CG + ++ +G
Sbjct: 4109 N------VWSWGDGDYGKLGRGGSDGCKVPMKIESLAG-LGVIKVECGSQFSVALTRSGS 4161
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
+++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4162 IYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4206
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+D G ++++WG G LG G T P +V
Sbjct: 4207 ACSDKG-EVFTWGDNDEGQLGDGTTCALQRPRLV 4239
Score = 96.3 bits (238), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/292 (29%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + S P + +
Sbjct: 2996 IKKVAVHSGGKHALALTQDGRVFSWGEG---EDGKLGHGNCSSLDKPRLIESLKSKRIRD 3052
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H A+ S+GE Y+WG G+LG GD ++L+PK++++
Sbjct: 3053 VACGSGHSAAITSSGE--------LYTWGLGEYGRLGHGDTNTQLKPKLVQSLVGQR--- 3101
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + +++G G+ G+LG G + P V L
Sbjct: 3102 VIQVACGSRDAQTMALT--------ADGSVYSWGDGDFGKLGRGGSDGCYTPLLVDRL-N 3152
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V ++CG + ++ G+VW+WG KG L P L+ G
Sbjct: 3153 GLGVVQIECGAQFSLALTKYGEVWTWG--KG----DYFRLGHGNDHHVRKPTLV--EGLR 3204
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + VA GA H + VTD G ++++WG G G G TI P++V
Sbjct: 3205 GKKV---IHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGSTIVNKKPSLV 3252
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 116/247 (46%), Gaps = 34/247 (13%)
Query: 118 PSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P+ + + KVA G +H +AL G + SWG +G+LG G+ S
Sbjct: 2985 PKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVF--------SWGEGEDGKLGHGNCSSL 3036
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+P++IE+ + +V CGS H+A +T +T+GLGE G+LGHG T
Sbjct: 3037 DKPRLIESLKSKR---IRDVACGSGHSAAITS--------SGELYTWGLGEYGRLGHGDT 3085
Query: 236 QSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ L P+ V+ L Q V V+ T +++ G V+SWG + G L R +
Sbjct: 3086 NTQLKPKLVQSLVGQRVIQVACGSRDAQTMALTADGSVYSWG-DGDFG-----KLGRGGS 3139
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+P+L+ G VQ+ CGA ++ +T G ++W+WG+G LG G
Sbjct: 3140 DGCYTPLLVDRLNGLG-----VVQIECGAQFSLALTKYG-EVWTWGKGDYFRLGHGNDHH 3193
Query: 355 FFAPAIV 361
P +V
Sbjct: 3194 VRKPTLV 3200
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 108/247 (43%), Gaps = 56/247 (22%)
Query: 118 PSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V+ F V +A +H +AL ED YSWG + G+LG GDR
Sbjct: 495 PQRVYGFSDKFVAMIASHPDGKHYLALT--------EDSSVYSWGNGDGGRLGHGDRTWY 546
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
PK+IE+ + + + CGS ++A L+ +T+G G G+LGHG +
Sbjct: 547 EEPKLIESLVDKN---ITFIACGSTYSAALSSNGE--------LYTWGRGNYGRLGHGNS 595
Query: 236 QSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASL 289
+VP V L ++ +V V CG T V+++G V+SWG + G G C
Sbjct: 596 DDVMVPTLVSALNGHM-IVYVACGSGDSQTLCVTASGIVFSWGDGDYGKLGRGGC----- 649
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGR 343
NG PK D + +V CG + +T G ++++WG+G
Sbjct: 650 ----------------NGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG-EVYTWGKGE 692
Query: 344 SGVLGTG 350
+ LG G
Sbjct: 693 AYRLGHG 699
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 108/257 (42%), Gaps = 36/257 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I V G S AI ++G L+ WG L + G + P V G V++V
Sbjct: 3049 RIRDVACGSGHSAAITSSGELYTWG---LGEYGRLGHGDTNTQLKPKLVQSLVGQRVIQV 3105
Query: 133 ACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
ACGS +AL + G Y SWG + G+LG G + P +++ N
Sbjct: 3106 ACGSRDAQTMALTADGSVY--------SWGDGDFGKLGRGGSDGCYTPLLVDRLNG---L 3154
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++ CG+ + LT WT+G G+ +LGHG P V+ L +
Sbjct: 3155 GVVQIECGAQFSLALTKYGE--------VWTWGKGDYFRLGHGNDHHVRKPTLVEGL-RG 3205
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++ V G H V+ G V++WG + G N S N+ P L+ H
Sbjct: 3206 KKVIHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGSTIVNK-----KPSLV-----HE 3254
Query: 311 PKFQDPVQVACGAAHTV 327
+V+CG++H++
Sbjct: 3255 LDDARVNRVSCGSSHSI 3271
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P + E+ + P ++T G +T +
Sbjct: 3899 YGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP---VQLTGGEQTLFAVT--------AD 3947
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S ++P ++ + Q+V++ V+V+ G H +SS G V+S
Sbjct: 3948 GKVYATGYGAVGRLGIGGTDSVMMPTLLESI-QHVFVKKVAVNSGGKHCLALSSEGHVYS 4006
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG E G + + + I +L + + V VACG H+ +T G+
Sbjct: 4007 WG-EGDDGKLGHGNRLSYDRPKLIEELLGT----------EIVDVACGGHHSAAITSAGW 4055
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG G + D P +V
Sbjct: 4056 -LYTWGKGRYGRLGHGDSEDQLTPKLV 4081
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 90/207 (43%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ QLG G + S+++ P E+ ++ P + G T + +
Sbjct: 2912 YVWGLNDKDQLG-GLKGSKIKLPVYSESLSKLKPVHI----AGGSKTLFVVSQ------- 2959
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWS 274
E + G G NG+LG G +A P+ + L QYV V+V G H ++ G V+S
Sbjct: 2960 EGKLYACGEGTNGRLGLGDDGNACEPKPIPFLSQYVIKKVAVHSGGKHALALTQDGRVFS 3019
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + + L P LI K + VACG+ H+ +T G
Sbjct: 3020 WGEGE------DGKLGHGNCSSLDKPRLI-----ESLKSKRIRDVACGSGHSAAITSSG- 3067
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG G G LG G T P +V
Sbjct: 3068 ELYTWGLGEYGRLGHGDTNTQLKPKLV 3094
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 86/205 (41%), Gaps = 25/205 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S A+ + G L+ WG + G + P+ V +GH +V VA
Sbjct: 560 ITFIACGSTYSAALSSNGELYTWGRG---NYGRLGHGNSDDVMVPTLVSALNGHMIVYVA 616
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS + + ++G + +SWG + G+LG G PKI++ +
Sbjct: 617 CGSGDSQTLCVTASG--------IVFSWGDGDYGKLGRGGCNGSKTPKIVDKLLDINVAK 668
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
VY CG +A LT +T+G GE +LGHG + P+ ++ L +
Sbjct: 669 VY---CGGQFSAALTAYGE--------VYTWGKGEAYRLGHGNEEHVRYPKAIEAL-KTK 716
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+ + G H ++ V+ WG
Sbjct: 717 KVKELCVGSLHVLALTEDQLVYGWG 741
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G V+KV CGS+
Sbjct: 4096 SGDAQTLCVTDDDNVWSWGDG---DYGKLGRGGSDGCKVPMKIESLAGLGVIKVECGSQF 4152
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y +WG + +LG G + RP+ + + + G
Sbjct: 4153 SVALTRSGSIY--------TWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4201
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4202 SLHCVACSDKGE--------VFTWGDNDEGQLGDGTTCALQRPRLVHAL-QGKKITRVAC 4252
Query: 259 GLFHT 263
G HT
Sbjct: 4253 GSAHT 4257
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 70/148 (47%), Gaps = 15/148 (10%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+S +++G G+ G+LGHG P+ ++ L + + CG +++ +SS G++++W
Sbjct: 524 DSSVYSWGNGDGGRLGHGDRTWYEEPKLIESLVDK-NITFIACGSTYSAALSSNGELYTW 582
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
G L + D + P L+S H V VACG+ + T+ VT G
Sbjct: 583 GRGN------YGRLGHGNSDDVMVPTLVSALNGHMI-----VYVACGSGDSQTLCVTASG 631
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++SWG G G LG G P IV
Sbjct: 632 I-VFSWGDGDYGKLGRGGCNGSKTPKIV 658
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 60/152 (39%), Gaps = 22/152 (14%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + +G ++ WG+ D G S TP V V KV CG +
Sbjct: 619 SGDSQTLCVTASGIVFSWGDG---DYGKLGRGGCNGSKTPKIVDKLLDINVAKVYCGGQF 675
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
AL + GE Y+WG +LG G+ E PK IE V E+ G
Sbjct: 676 SAALTAYGEV--------YTWGKGEAYRLGHGNEEHVRYPKAIEALKTKK---VKELCVG 724
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
S H LT + + + +G + GQ+
Sbjct: 725 SLHVLALTE--------DQLVYGWGRNDYGQI 748
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ + G ++ WG+ D +G S + + PS V + V +V
Sbjct: 3207 KVIHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGSTIVNKKPSLVHELDDARVNRV 3263
Query: 133 ACGSEHVVALV 143
+CGS H +A V
Sbjct: 3264 SCGSSHSIAWV 3274
>gi|95007393|emb|CAJ20613.1| uvb-resistance protein uvr8, putative [Toxoplasma gondii RH]
Length = 918
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 136/299 (45%), Gaps = 68/299 (22%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHTVVKVA 133
V AGGM + ++G L+MWG +++EG + P V HG V VA
Sbjct: 18 VSAGGMQMAVVAHSGELYMWG------ANSEGQLGTGDRRDASVPRLVKALHGKVVKAVA 71
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------------------GDRESR 175
C EH V + +D Y+WG NG+LGL G R
Sbjct: 72 CSQEHTVCCL--------DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPATGARPEP 123
Query: 176 L-------RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
L P+++E+ + + +V CG +H+A L ++ L +T GLG NG
Sbjct: 124 LASACAVCTPRVLESLCG---YFIADVACGPYHSAFLGIYEQDRTSL----FTCGLGLNG 176
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLC 284
+LGHG + +P V L + V + ++ CG HT+ V+SAG +++WG GLG
Sbjct: 177 RLGHGDEEDRHLPTAVHAL-ENVNITAIACGAHHTACVTSAGTLYTWGGAAFGKLGLG-- 233
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
+ G + P +SG + + V VA G+ H+ VT DG +L++WG+GR
Sbjct: 234 -------STRGSQLLPKHVSGP----LRNKAVVSVALGSQHSACVTTDG-ELYTWGQGR 280
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 24/168 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P+ V + +ACG+ H + SAG Y+WG G+LGLG R S+L
Sbjct: 189 PTAVHALENVNITAIACGAHHTACVTSAG--------TLYTWGGAAFGKLGLGSTRGSQL 240
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
PK + ++ AV V GS H+A +T + +T+G G +LGH
Sbjct: 241 LPKHVSGPLRNK--AVVSVALGSQHSACVT--------TDGELYTWGQGR--RLGHEVQG 288
Query: 237 SA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
+ ++P +V+ L ++++ V CG HT+ + G+VW+WG + LG
Sbjct: 289 ESDEILPRRVEAL-LGLFVIHVVCGDAHTACIVENGNVWAWGTSRILG 335
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 96/247 (38%), Gaps = 53/247 (21%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+ G + + +GE Y WGAN+ GQLG GDR P++++ +
Sbjct: 17 RVSAGGMQMAVVAHSGELYM--------WGANSEGQLGTGDRRDASVPRLVKALHGK--- 65
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HG---------------- 233
V V C HT + + + +G NG+LG HG
Sbjct: 66 VVKAVACSQEHTVCC--------LDDGSAYAWGCALNGRLGLHGLSIPSSAGLGVFSPAT 117
Query: 234 --------TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+ + P ++ L Y ++ V CG +H++ + + GLGL
Sbjct: 118 GARPEPLASACAVCTPRVLESLCGY-FIADVACGPYHSAFLGIYEQDRTSLFTCGLGL-- 174
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N L + D P + H + + +ACGA HT VT G L++WG G
Sbjct: 175 NGRLGHGDEEDRHLPTAV-----HALENVNITAIACGAHHTACVTSAG-TLYTWGGAAFG 228
Query: 346 VLGTGKT 352
LG G T
Sbjct: 229 KLGLGST 235
>gi|312381821|gb|EFR27472.1| hypothetical protein AND_05798 [Anopheles darlingi]
Length = 5197
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 143/295 (48%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG + G + ++ P + +
Sbjct: 3328 VKKVAVHSGGKHAMALTLDGKVFSWGEG---EDGKLGHGNRLTLEKPKLIETLRTKRIRD 3384
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK++ +
Sbjct: 3385 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNCTQLKPKLVTAL---ADHR 3433
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + E + +++G G+ G+LG G ++ +P QV+ L V
Sbjct: 3434 VVQVACGSRDAQTLCLTE------EGLVFSWGDGDFGKLGRGGSEGCSIPHQVERL-NGV 3486
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ ++CG + ++ +G+VW+WG KG LG + + + +PI
Sbjct: 3487 GVMQIECGAQFSLALTKSGEVWTWG--KGDYYRLGHGTDQHVRKP------TPI------ 3532
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G TI P++VL
Sbjct: 3533 -QGLRGKKVIHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGSGNTIVNKKPSLVL 3585
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 115/251 (45%), Gaps = 34/251 (13%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
S TP+ V + KVA G +H +AL S GE + SWG +G+LG G+
Sbjct: 4449 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVF--------SWGEGEDGKLGHGN 4500
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R+S RPK+IE S V ++ CGS H+A +T + T+G G G+LG
Sbjct: 4501 RDSYDRPKLIEAL---SGIGVIDIACGSAHSACITS--------QGHVLTWGKGRYGRLG 4549
Query: 232 HGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
HG ++ L P+ V+ L Y + ++ G T ++ +VWSWG + G L
Sbjct: 4550 HGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG-DGDYG-----KLG 4603
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R + P+ I G +V CG+ +V +T G +++WG+G LG G
Sbjct: 4604 RGGSDGCKVPMKIESLAGLG-----VTKVECGSQFSVALTRSG-SVYTWGKGDYHRLGHG 4657
Query: 351 KTIDFFAPAIV 361
T P V
Sbjct: 4658 NTDHVRRPKKV 4668
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 128/294 (43%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + S P + G V+
Sbjct: 4464 IKKVAVNSGGKHCLALSSDGEVFSWGEG---EDGKLGHGNRDSYDRPKLIEALSGIGVID 4520
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H + S G +WG G+LG GD E +L+PK++E +
Sbjct: 4521 IACGSAHSACITSQGHVL--------TWGKGRYGRLGHGDSEDQLQPKLVEAL---LGYR 4569
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + VP +++ L +
Sbjct: 4570 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKVPMKIESLAG-L 4622
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4623 GVTKVECGSQFSVALTRSGSVYTWG--KGDYHRLGHGNTDHVRRPKKVAAL--------- 4671
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4672 -QGKKI---ISIATGSLHCVACSDGG-EVFTWGDNDEGQLGDGTVSAIQRPRLV 4720
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 107/258 (41%), Gaps = 38/258 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S AI ++G L+ WG L + G + P V H VV+V
Sbjct: 3381 RIRDIACGSSHSAAITSSGELYTWG---LGEYGRLGHGDNCTQLKPKLVTALADHRVVQV 3437
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E+ + +SWG + G+LG G E P +E N V
Sbjct: 3438 ACGSRDAQTLCLT------EEGLVFSWGDGDFGKLGRGGSEGCSIPHQVERLNG---VGV 3488
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT WT+G G+ +LGHGT Q P ++ L +
Sbjct: 3489 MQIECGAQFSLALTKSGE--------VWTWGKGDYYRLGHGTDQHVRKPTPIQGL-RGKK 3539
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++ V G H V+ +G V++WG N+ G S I P
Sbjct: 3540 VIHVAVGALHCLAVTDSGQVYAWG--------------DNDHGQQGSGNTIVNKKPSLVL 3585
Query: 313 FQDPV---QVACGAAHTV 327
D + +VACG++H+V
Sbjct: 3586 GLDGIFVNRVACGSSHSV 3603
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 101/203 (49%), Gaps = 28/203 (13%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 209
+D Y+ G NG+LGLG + PK + +Q + V +V G H LT
Sbjct: 3291 QDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQ---YVVKKVAVHSGGKHAMALT--- 3344
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
L+ +++G GE+G+LGHG + P+ ++ L + + + CG H++ ++S+
Sbjct: 3345 -----LDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETL-RTKRIRDIACGSSHSAAITSS 3398
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTV 327
G++++WG+ + L + + P L++ H VQVACG+ A T+
Sbjct: 3399 GELYTWGLGE------YGRLGHGDNCTQLKPKLVTALADH-----RVVQVACGSRDAQTL 3447
Query: 328 LVTDDGYKLWSWGRGRSGVLGTG 350
+T++G ++SWG G G LG G
Sbjct: 3448 CLTEEGL-VFSWGDGDFGKLGRG 3469
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 113/254 (44%), Gaps = 54/254 (21%)
Query: 98 NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLV 155
NC PD++ P P+ +V++A C HV+AL + G+ +
Sbjct: 610 NCHTPDTTA-----------PKPIEGLESVNIVQLAAHCEGRHVLALTATGDVF------ 652
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
SWG G+LG GD S+ P I + V+ CGS ++A +T
Sbjct: 653 --SWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTGVF---CGSSYSAAIT--------A 699
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ-YVYLVSVDCGLFHTSVVSSAGDVWS 274
+T+G G G+LGHG ++ +P V+ L Q V V++ CG H+ V+ G V++
Sbjct: 700 AGELYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHVALGCGDAHSLCVTDTGIVYA 759
Query: 275 WG----MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD-PVQVACGAAHTVLV 329
WG + G G C +S+ P+ I P+ D V+V G+ +V +
Sbjct: 760 WGDGDFGKLGNGTCNGSSV----------PVAI-----ELPQCSDGAVKVFSGSHFSVAL 804
Query: 330 TDDGYKLWSWGRGR 343
DG ++SWG+G
Sbjct: 805 GRDG-TVYSWGKGH 817
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/262 (27%), Positives = 109/262 (41%), Gaps = 34/262 (12%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
G LA+ G ++ WGN + G S P+ + V V CGS +
Sbjct: 639 GRHVLALTATGDVFSWGNG---EGGRLGHGDTSSKDIPTRIVALAERQVTGVFCGSSYSA 695
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
A+ +AGE Y+WG G+LG G+ E + P I++ Q V + CG
Sbjct: 696 AITAAGE--------LYTWGRGTYGRLGHGNSEDKHLPTIVQVLKQQRVIHV-ALGCGDA 746
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCG 259
H+ +T + + +G G+ G+LG+GT + VP + ELPQ V V G
Sbjct: 747 HSLCVTD--------TGIVYAWGDGDFGKLGNGTCNGSSVPVAI-ELPQCSDGAVKVFSG 797
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
+ + G V+SWG L + SP I + ++ V +
Sbjct: 798 SHFSVALGRDGTVYSWGKGH------GGRLGHGHSEHTASPKAI-----QALEGKNIVDL 846
Query: 320 ACGAAHTVLVTDDGYKLWSWGR 341
A G AH + +T G +L+ WGR
Sbjct: 847 AVGLAHCLALTASG-ELYGWGR 867
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 14/152 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +G+++ WG D G +
Sbjct: 4605 GGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG---DYHRLGHGNTDH 4661
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA GE + +WG N+ GQLG G +
Sbjct: 4662 VRRPKKVAALQGKKIISIATGSLHCVACSDGGEVF--------TWGDNDEGQLGDGTVSA 4713
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
RP+++++ + +V CGS HT L+
Sbjct: 4714 IQRPRLVQSLQGKH---IVKVICGSAHTLALS 4742
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 159 WGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG N+ QLG G + S+++ P +Q P + GS +++ +
Sbjct: 3246 WGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKP---IHIAGGSKSLFIVSQ--------DG 3293
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSWG 276
+ G G NG+LG G + P+QV L QYV V+V G H ++ G V+SWG
Sbjct: 3294 KLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWG 3353
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ L LT + P LI + +D +ACG++H+ +T G +L
Sbjct: 3354 EGEDGKLGHGNRLTLEK------PKLI--ETLRTKRIRD---IACGSSHSAAITSSG-EL 3401
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G G LG G P +V
Sbjct: 3402 YTWGLGEYGRLGHGDNCTQLKPKLV 3426
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 15/147 (10%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE G+LGHG T S +P ++ L + + V CG +++ +++AG++++WG +
Sbjct: 652 FSWGNGEGGRLGHGDTSSKDIPTRIVALAER-QVTGVFCGSSYSAAITAAGELYTWG--R 708
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA--CGAAHTVLVTDDGYKLW 337
G L + D P ++ K Q + VA CG AH++ VTD G ++
Sbjct: 709 GT----YGRLGHGNSEDKHLPTIV-----QVLKQQRVIHVALGCGDAHSLCVTDTGI-VY 758
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+WG G G LG G P + P
Sbjct: 759 AWGDGDFGKLGNGTCNGSSVPVAIELP 785
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 23/190 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V KV CGS+
Sbjct: 4577 SGDAQTLCITDDDNVWSWGDG---DYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQF 4633
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y +WG + +LG G+ + RPK + + + G
Sbjct: 4634 SVALTRSGSVY--------TWGKGDYHRLGHGNTDHVRRPKKVAALQGKK---IISIATG 4682
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + D E W G + GQLG GT + P V+ L Q ++V V C
Sbjct: 4683 SLHCVACS------DGGEVFTW--GDNDEGQLGDGTVSAIQRPRLVQSL-QGKHIVKVIC 4733
Query: 259 GLFHTSVVSS 268
G HT +S+
Sbjct: 4734 GSAHTLALST 4743
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ GQLG D P E + P ++ G +T P+ L
Sbjct: 4380 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRP---IQIAGGEQTLYAVT----PDGKL- 4431
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S P V+ L Q+V + V+V+ G H +SS G+V+S
Sbjct: 4432 ---YATGYGAGGRLGIGGTDSVTTPTLVESL-QHVMIKKVAVNSGGKHCLALSSDGEVFS 4487
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG S R + +A+S I + + +ACG+AH+ +T
Sbjct: 4488 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGV-------------IDIACGSAHSACITSQ 4534
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4535 GHVL-TWGKGRYGRLGHGDSEDQLQPKLV 4562
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 61/131 (46%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + ++ G SLA+ +G +W WG D G + P+P+ G V+
Sbjct: 3486 VGVMQIECGAQFSLALTKSGEVWTWGKG---DYYRLGHGTDQHVRKPTPIQGLRGKKVIH 3542
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ +G+ Y+WG N++GQ G G+ +P ++ D +
Sbjct: 3543 VAVGALHCLAVTDSGQV--------YAWGDNDHGQQGSGNTIVNKKPSLV--LGLDGIF- 3591
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 3592 VNRVACGSSHS 3602
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ ++G ++ WG+ D +G + + + PS V G V +V
Sbjct: 3539 KVIHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGSGNTIVNKKPSLVLGLDGIFVNRV 3595
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3596 ACGSSHSVA 3604
Score = 41.2 bits (95), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 16/113 (14%)
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGP 308
+ ++ C H +++ GDV+SWG +G LG +S A++ ++G
Sbjct: 630 IVQLAAHCEGRHVLALTATGDVFSWGNGEGGRLGHGDTSSKDIPTRIVALAERQVTG--- 686
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V CG++++ +T G +L++WGRG G LG G + D P IV
Sbjct: 687 ----------VFCGSSYSAAITAAG-ELYTWGRGTYGRLGHGNSEDKHLPTIV 728
>gi|326509355|dbj|BAJ91594.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518534|dbj|BAJ88296.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 158/378 (41%), Gaps = 95/378 (25%)
Query: 32 DGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI-DN 89
DGQLG S + VP V+ F P ++ SV G ++A D+
Sbjct: 50 DGQLGHGDSEDRPVPTVLTSF-----------------DVP-RVTSVICGADHTIAYSDD 91
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
L+ WG D G + F P P+ G + ++ACG H + + T+
Sbjct: 92 EMQLYSWG---WGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV-----TF 143
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH-- 207
G+ +SWG N NGQLGLG+ + L P+ I+ F V + G+ HT +T
Sbjct: 144 NGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV---CVKMIAAGAEHTTAITEGG 197
Query: 208 --------------------RKRPND--------MLESMC--------------WTFGLG 225
R P M+ C +T+G
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGL 283
+ GQLGHG Q LVP +++ L + V + + G HT V+ G ++ WG K +G+
Sbjct: 258 KYGQLGHGDFQDHLVPRKLEAL-KDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGV 316
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
N D SP+ + + P Q VQVACG HT+ +T++ ++SWGRG
Sbjct: 317 EDNV--------DHCSPVEV-----NFPDEQKIVQVACGWRHTLALTEN-KNIFSWGRGA 362
Query: 344 SGVLGTGKTIDFFAPAIV 361
SG LG G+ ID P ++
Sbjct: 363 SGQLGHGEIIDRNTPKMI 380
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+V+ ++ G+ H AL+S +VC SWG +GQLG GD E R P ++ +F
Sbjct: 21 QSVILISAGANHSAALLSG-------QMVC-SWGRGEDGQLGHGDSEDRPVPTVLTSF-- 70
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D P V V CG+ HT + +D ++ W G G+ G+LGHG + P+ +
Sbjct: 71 DVP-RVTSVICGADHTIAYS-----DDEMQLYSW--GWGDFGRLGHGNSSDVFNPQPIVA 122
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILIS 304
L Q + + + CG H V+ G V SWG + LGL N + A + +
Sbjct: 123 L-QGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK 181
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A GA HT +T+ G L+ WG GR G LG D P V
Sbjct: 182 -------------MIAAGAEHTTAITEGG-DLYGWGWGRYGNLGLSDRDDRSVPEKV 224
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 98/297 (32%), Gaps = 89/297 (29%)
Query: 1 MKLQHYYYHYYLCFTCFFMPFICYTSLNCCMDGQLGF-SGSNSLVPCVIEQFLTIGAPDS 59
MK++ C T F + N +GQLG + +SL+P I+ F
Sbjct: 126 MKIKQIACGDSHCLTVTFNGQVHSWGRN--QNGQLGLGNNQDSLLPQKIKAF-------- 175
Query: 60 LEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVS 114
+ + + AG + AI G L+ WG N L D
Sbjct: 176 ----------EGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRS------ 219
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK------------------------ 150
P V G +V VACG H V++ S+G Y
Sbjct: 220 --VPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLE 277
Query: 151 --------------------GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
ED Y WG N GQ+G+ D P + ++
Sbjct: 278 ALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQK-- 335
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +V CG HT LT K +++G G +GQLGHG P+ + L
Sbjct: 336 -IVQVACGWRHTLALTENKN--------IFSWGRGASGQLGHGEIIDRNTPKMIDAL 383
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 242 EQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
E V E P Q V L+S G H++ + S V SWG + + L ++ D P
Sbjct: 13 EAVPEAPEQSVILIS--AGANHSAALLSGQMVCSWGRGE------DGQLGHGDSEDRPVP 64
Query: 301 ILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+++ F P V CGA HT+ +DD +L+SWG G G LG G + D F P
Sbjct: 65 TVLT-------SFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNP 117
Query: 359 AIVL 362
++
Sbjct: 118 QPIV 121
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I + G ++A+ G L+ WG E V +P V +V+
Sbjct: 282 VPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN---VDHCSPVEVNFPDEQKIVQ 338
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VACG H +AL E+ +SWG +GQLG G+ R PK+I+ + D
Sbjct: 339 VACGWRHTLALT--------ENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLD 386
>gi|326511771|dbj|BAJ92030.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 442
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 106/378 (28%), Positives = 158/378 (41%), Gaps = 95/378 (25%)
Query: 32 DGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI-DN 89
DGQLG S + VP V+ F P ++ SV G ++A D+
Sbjct: 50 DGQLGHGDSEDRPVPTVLTSF-----------------DVP-RVTSVICGADHTIAYSDD 91
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
L+ WG D G + F P P+ G + ++ACG H + + T+
Sbjct: 92 EMQLYSWG---WGDFGRLGHGNSSDVFNPQPIVALQGMKIKQIACGDSHCLTV-----TF 143
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH-- 207
G+ +SWG N NGQLGLG+ + L P+ I+ F V + G+ HT +T
Sbjct: 144 NGQ---VHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGV---CVKMIAAGAEHTTAITEGG 197
Query: 208 --------------------RKRPND--------MLESMC--------------WTFGLG 225
R P M+ C +T+G
Sbjct: 198 DLYGWGWGRYGNLGLSDRDDRSVPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWS 257
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGL 283
+ GQLGHG Q LVP +++ L + V + + G HT V+ G ++ WG K +G+
Sbjct: 258 KYGQLGHGDFQDHLVPRKLEAL-KDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGV 316
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
N D SP+ + + P Q VQVACG HT+ +T++ ++SWGRG
Sbjct: 317 EDNV--------DHCSPVEV-----NFPDEQKIVQVACGWRHTLALTEN-KNIFSWGRGA 362
Query: 344 SGVLGTGKTIDFFAPAIV 361
SG LG G+ ID P ++
Sbjct: 363 SGQLGHGEIIDRNTPKMI 380
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 106/237 (44%), Gaps = 35/237 (14%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+V+ ++ G+ H AL+S +VC SWG +GQLG GD E R P ++ +F
Sbjct: 21 QSVILISAGANHSAALLSG-------QMVC-SWGRGEDGQLGHGDSEDRPVPTVLTSF-- 70
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D P V V CG+ HT + +D ++ W G G+ G+LGHG + P+ +
Sbjct: 71 DVP-RVTSVICGADHTIAYS-----DDEMQLYSW--GWGDFGRLGHGNSSDVFNPQPIVA 122
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILIS 304
L Q + + + CG H V+ G V SWG + LGL N + A + +
Sbjct: 123 L-QGMKIKQIACGDSHCLTVTFNGQVHSWGRNQNGQLGLGNNQDSLLPQKIKAFEGVCVK 181
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A GA HT +T+ G L+ WG GR G LG D P V
Sbjct: 182 -------------MIAAGAEHTTAITEGG-DLYGWGWGRYGNLGLSDRDDRSVPEKV 224
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 98/297 (32%), Gaps = 89/297 (29%)
Query: 1 MKLQHYYYHYYLCFTCFFMPFICYTSLNCCMDGQLGF-SGSNSLVPCVIEQFLTIGAPDS 59
MK++ C T F + N +GQLG + +SL+P I+ F
Sbjct: 126 MKIKQIACGDSHCLTVTFNGQVHSWGRN--QNGQLGLGNNQDSLLPQKIKAF-------- 175
Query: 60 LEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVS 114
+ + + AG + AI G L+ WG N L D
Sbjct: 176 ----------EGVCVKMIAAGAEHTTAITEGGDLYGWGWGRYGNLGLSDRDDRS------ 219
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK------------------------ 150
P V G +V VACG H V++ S+G Y
Sbjct: 220 --VPEKVSSVEGEKMVLVACGWRHSVSVSSSGALYTYGWSKYGQLGHGDFQDHLVPRKLE 277
Query: 151 --------------------GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
ED Y WG N GQ+G+ D P + ++
Sbjct: 278 ALKDVPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDNVDHCSPVEVNFPDEQK-- 335
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +V CG HT LT K +++G G +GQLGHG P+ + L
Sbjct: 336 -IVQVACGWRHTLALTENKN--------IFSWGRGASGQLGHGEIIDRNTPKMIDAL 383
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 242 EQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
E V E P Q V L+S G H++ + S V SWG + + L ++ D P
Sbjct: 13 EAVPEAPEQSVILISA--GANHSAALLSGQMVCSWGRGE------DGQLGHGDSEDRPVP 64
Query: 301 ILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+++ F P V CGA HT+ +DD +L+SWG G G LG G + D F P
Sbjct: 65 TVLT-------SFDVPRVTSVICGADHTIAYSDDEMQLYSWGWGDFGRLGHGNSSDVFNP 117
Query: 359 AIVL 362
++
Sbjct: 118 QPIV 121
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 50/116 (43%), Gaps = 11/116 (9%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I + G ++A+ G L+ WG E V +P V +V+
Sbjct: 282 VPISQISGGWRHTMAVAEDGKLYGWGWNKFGQVGVEDN---VDHCSPVEVNFPDEQKIVQ 338
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VACG H +AL E+ +SWG +GQLG G+ R PK+I+ + D
Sbjct: 339 VACGWRHTLALT--------ENKNIFSWGRGASGQLGHGEIIDRNTPKMIDALSLD 386
>gi|158300884|ref|XP_552411.3| AGAP011823-PA [Anopheles gambiae str. PEST]
gi|157013375|gb|EAL38855.3| AGAP011823-PA [Anopheles gambiae str. PEST]
Length = 4947
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 143/295 (48%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG + G + ++ P + +
Sbjct: 3115 VKKVAVHSGGKHAMALTLDGKVFSWGEG---EDGKLGHGNRLTLEKPKLIETLRTKRIRD 3171
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK++ QD
Sbjct: 3172 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNCTQLKPKLVTAL-QDH--R 3220
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + + + +++G G+ G+LG G ++ +P QV L V
Sbjct: 3221 VVQVACGSRDAQTLCLTE------DGLVFSWGDGDFGKLGRGGSEGCSIPHQVDRL-NGV 3273
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ ++CG + ++ AG+VW+WG KG LG + + + +PI
Sbjct: 3274 GVMQIECGAQFSLALTKAGEVWTWG--KGDYYRLGHGTDQHVRKP------TPI------ 3319
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G TI P++VL
Sbjct: 3320 -QGLRGKKVIHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGSGNTIVNKKPSLVL 3372
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 117/251 (46%), Gaps = 34/251 (13%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
S TP+ V + KVA G +H +AL S GE + SWG +G+LG G+
Sbjct: 4161 SVTTPTLVESLQHVMIKKVAVNSGGKHCLALSSDGEVF--------SWGEGEDGKLGHGN 4212
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R+S RPK+IE+ S V ++ CGS H+A +T ++ T+G G G+LG
Sbjct: 4213 RDSYDRPKLIESL---SGIGVVDIACGSAHSACIT--------IQGHVLTWGKGRYGRLG 4261
Query: 232 HGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
HG ++ L P+ V+ L Y + ++ G T ++ +VWSWG + G L
Sbjct: 4262 HGDSEDQLQPKLVEALLGYRAIDIACGSGDAQTLCITDDDNVWSWG-DGDYG-----KLG 4315
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R + P+ I G +V CG+ +V +T G +++WG+G LG G
Sbjct: 4316 RGGSDGCKVPMKIESLAGLG-----VTKVECGSQFSVALTRSG-SVYTWGKGDYHRLGHG 4369
Query: 351 KTIDFFAPAIV 361
T P V
Sbjct: 4370 NTDHVRRPKKV 4380
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + S P + G VV
Sbjct: 4176 IKKVAVNSGGKHCLALSSDGEVFSWGEG---EDGKLGHGNRDSYDRPKLIESLSGIGVVD 4232
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H SA T +G L +WG G+LG GD E +L+PK++E +
Sbjct: 4233 IACGSAH-----SACITIQGHVL---TWGKGRYGRLGHGDSEDQLQPKLVEAL---LGYR 4281
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + VP +++ L +
Sbjct: 4282 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKVPMKIESLAG-L 4334
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4335 GVTKVECGSQFSVALTRSGSVYTWG--KGDYHRLGHGNTDHVRRPKKVAAL--------- 4383
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4384 -QGKKI---ISIATGSLHCVACSDAG-EVFTWGDNDEGQLGDGTVSAIQRPRLV 4432
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 114/237 (48%), Gaps = 34/237 (14%)
Query: 128 TVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
T+V++A C HV+AL S+G+ Y SWG+ + G+LG GD ++ P I
Sbjct: 608 TIVQLAAHCEGRHVLALASSGDVY--------SWGSGDGGRLGHGDTSAKELPTRIAALA 659
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V+ CGS ++A +T +T+G G G+LGHG ++ VP V
Sbjct: 660 DRQVTGVF---CGSSYSAAIT--------ASGELYTWGRGTYGRLGHGNSEDKYVPTLVT 708
Query: 246 ELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
L + V V++ CG H+ V+ AG ++WG + G N S G ++ P+ +
Sbjct: 709 ALKAHRVVHVALGCGDAHSLCVTEAGLAFAWG-DGDFGKLGNESCV----GTSV-PVQVD 762
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P+ V+V G+ +V +T +G +++WG+G G LG G + P +V
Sbjct: 763 -----LPQASCVVKVFSGSQFSVALTREG-TVYTWGKGHGGRLGHGNSEHSPVPKMV 813
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 101/203 (49%), Gaps = 28/203 (13%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 209
+D Y+ G NG+LGLG + PK + +Q + V +V G H LT
Sbjct: 3078 QDGKLYACGEGTNGRLGLGHNNNVPTPKQVPILSQ---YVVKKVAVHSGGKHAMALT--- 3131
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
L+ +++G GE+G+LGHG + P+ ++ L + + + CG H++ ++S+
Sbjct: 3132 -----LDGKVFSWGEGEDGKLGHGNRLTLEKPKLIETL-RTKRIRDIACGSSHSAAITSS 3185
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTV 327
G++++WG+ + L + + P L++ H VQVACG+ A T+
Sbjct: 3186 GELYTWGLGE------YGRLGHGDNCTQLKPKLVTALQDH-----RVVQVACGSRDAQTL 3234
Query: 328 LVTDDGYKLWSWGRGRSGVLGTG 350
+T+DG ++SWG G G LG G
Sbjct: 3235 CLTEDGL-VFSWGDGDFGKLGRG 3256
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/237 (27%), Positives = 106/237 (44%), Gaps = 34/237 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTV 129
++ V G S AI +G L+ WG T G +S + P+ V H V
Sbjct: 662 QVTGVFCGSSYSAAITASGELYTWGR------GTYGRLGHGNSEDKYVPTLVTALKAHRV 715
Query: 130 VKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V VA CG H + + AG + ++WG + G+LG ES + + +
Sbjct: 716 VHVALGCGDAHSLCVTEAG--------LAFAWGDGDFGKLG---NESCVGTSVPVQVDLP 764
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V GS + LT E +T+G G G+LGHG ++ + VP+ V+ L
Sbjct: 765 QASCVVKVFSGSQFSVALTR--------EGTVYTWGKGHGGRLGHGNSEHSPVPKMVQAL 816
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ +V + GL H ++++G+++ WG +CP +TR+ A PIL +
Sbjct: 817 -EGKKIVDLAVGLAHCLALTASGELYGWGRNDFQQICPEC-VTRDPIITA--PILTT 869
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +G+++ WG D G +
Sbjct: 4317 GGSDGCKVPMKIESLAGLGVTKVECGSQFSVALTRSGSVYTWGKG---DYHRLGHGNTDH 4373
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA AGE + +WG N+ GQLG G +
Sbjct: 4374 VRRPKKVAALQGKKIISIATGSLHCVACSDAGEVF--------TWGDNDEGQLGDGTVSA 4425
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
RP+++++ + +V CGS HT L+
Sbjct: 4426 IQRPRLVQSLQGKH---IVKVICGSAHTLALS 4454
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 77/190 (40%), Gaps = 23/190 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V KV CGS+
Sbjct: 4289 SGDAQTLCITDDDNVWSWGDG---DYGKLGRGGSDGCKVPMKIESLAGLGVTKVECGSQF 4345
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y +WG + +LG G+ + RPK + + + G
Sbjct: 4346 SVALTRSGSVY--------TWGKGDYHRLGHGNTDHVRRPKKVAALQGKK---IISIATG 4394
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + D E W G + GQLG GT + P V+ L Q ++V V C
Sbjct: 4395 SLHCVACS------DAGEVFTW--GDNDEGQLGDGTVSAIQRPRLVQSL-QGKHIVKVIC 4445
Query: 259 GLFHTSVVSS 268
G HT +S+
Sbjct: 4446 GSAHTLALST 4455
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 26/205 (12%)
Query: 159 WGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG N+ QLG G + S+++ P +Q P + GS +++ +
Sbjct: 3033 WGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKP---IHIAGGSKSLFIVSQ--------DG 3080
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSWG 276
+ G G NG+LG G + P+QV L QYV V+V G H ++ G V+SWG
Sbjct: 3081 KLYACGEGTNGRLGLGHNNNVPTPKQVPILSQYVVKKVAVHSGGKHAMALTLDGKVFSWG 3140
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ L LT + P LI + +D +ACG++H+ +T G +L
Sbjct: 3141 EGEDGKLGHGNRLTLEK------PKLI--ETLRTKRIRD---IACGSSHSAAITSSG-EL 3188
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G G LG G P +V
Sbjct: 3189 YTWGLGEYGRLGHGDNCTQLKPKLV 3213
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ GQLG D P E + P ++ G +T P+ L
Sbjct: 4092 FGWGHNHRGQLGGLDGSRIKNPTPCEALSLLRP---IQIAGGEQTLYAVT----PDGKL- 4143
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S P V+ L Q+V + V+V+ G H +SS G+V+S
Sbjct: 4144 ---YATGYGAGGRLGVGGTDSVTTPTLVESL-QHVMIKKVAVNSGGKHCLALSSDGEVFS 4199
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG S R + +++S I + V +ACG+AH+ +T
Sbjct: 4200 WGEGEDGKLGHGNRDSYDRPKLIESLSGIGV-------------VDIACGSAHSACITIQ 4246
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4247 GHVL-TWGKGRYGRLGHGDSEDQLQPKLV 4274
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG T + +P ++ L + V CG +++ ++++G++++WG +
Sbjct: 631 YSWGSGDGGRLGHGDTSAKELPTRIAALADR-QVTGVFCGSSYSAAITASGELYTWG--R 687
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L + D P L++ H V + CG AH++ VT+ G ++W
Sbjct: 688 G----TYGRLGHGNSEDKYVPTLVTALKAHRVVH---VALGCGDAHSLCVTEAGLA-FAW 739
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWP 364
G G G LG + P V P
Sbjct: 740 GDGDFGKLGNESCVGTSVPVQVDLP 764
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 58/121 (47%), Gaps = 12/121 (9%)
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P QVK L + ++ C H ++S+GDV+SWG G G + + E I+
Sbjct: 599 PAQVKGLECTIVQLAAHCEGRHVLALASSGDVYSWGSGDG-GRLGHGDTSAKELPTRIAA 657
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ + V CG++++ +T G +L++WGRG G LG G + D + P +
Sbjct: 658 L----------ADRQVTGVFCGSSYSAAITASG-ELYTWGRGTYGRLGHGNSEDKYVPTL 706
Query: 361 V 361
V
Sbjct: 707 V 707
Score = 41.6 bits (96), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ ++G ++ WG+ D +G + + + PS V G V +V
Sbjct: 3326 KVIHVAVGALHCLAVTDSGQVYAWGD---NDHGQQGSGNTIVNKKPSLVLGLDGIFVNRV 3382
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3383 ACGSSHSVA 3391
>gi|444915391|ref|ZP_21235524.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713468|gb|ELW54366.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 743
Score = 102 bits (255), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 138/307 (44%), Gaps = 53/307 (17%)
Query: 62 DDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
+ + N +P+++ +V AG SLA + G++W WG+ DS G + +S
Sbjct: 380 EGTTNNRASPVQVQGLGGGVAVAAGFNHSLAARSDGSVWAWGSN---DSGQLGDGTTRNS 436
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+P V G VV VA G +H +AL S G ++WG+N GQLG G +R
Sbjct: 437 TSPVQVQGLSG--VVAVAAGFDHSLALRSDGS--------VWAWGSNAYGQLGEGTTTNR 486
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P + + V V GS H+ L R + WT+G GQLG GTT
Sbjct: 487 LVPVQVLS-------GVVAVAAGSNHS--LAVRS------DGTVWTWGSNLYGQLGDGTT 531
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+ LVP QV+ L + +V G FH+ V S G VW+WG S + E G
Sbjct: 532 SNRLVPVQVQGLSG---VAAVAAGSFHSLAVHSDGSVWAWG-----------SNSSGELG 577
Query: 296 DA-ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
D S L+ G P V VA G H+++V DG +W+WG G LG G T
Sbjct: 578 DGTTSNRLVPG---RVPGLSGGVAVAAGGFHSLVVRSDG-TVWTWGSNSFGELGDGTTTS 633
Query: 355 FFAPAIV 361
P V
Sbjct: 634 RSVPVQV 640
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 94/308 (30%), Positives = 137/308 (44%), Gaps = 54/308 (17%)
Query: 60 LEDDSKTNHKAPIKICS----VKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSL 112
L + + TN P+++ S V AG SLA+ + G +W WG+ L D +T
Sbjct: 478 LGEGTTTNRLVPVQVLSGVVAVAAGSNHSLAVRSDGTVWTWGSNLYGQLGDGTTS----- 532
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V G V VA GS H +A+ S G ++WG+N++G+LG G
Sbjct: 533 -NRLVPVQVQGLSG--VAAVAAGSFHSLAVHSDGS--------VWAWGSNSSGELGDGTT 581
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+RL P + + V G FH+ ++ + WT+G G+LG
Sbjct: 582 SNRLVPGRVPGLSGG-----VAVAAGGFHSLVVRS--------DGTVWTWGSNSFGELGD 628
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT S VP QV+ L +V+VD G H+ V S G VW+WG G + + TR
Sbjct: 629 GTTTSRSVPVQVQGLSG---VVAVDAGNSHSLAVRSDGTVWTWGYNS-YGQLGDGTTTRR 684
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P+ + P V +A GA H ++V DG +W+WG G LG G
Sbjct: 685 SV-----PVQV-------PGLSGVVAMATGALHPLVVRSDG-TVWAWGYNSFGQLGNGSP 731
Query: 353 IDFFAPAI 360
+ F AI
Sbjct: 732 L-FATTAI 738
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 142/311 (45%), Gaps = 55/311 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + T P+++ SV AG SLA+ + G +W WG+ L D +T
Sbjct: 128 LGDGTTTMRLTPVRVQGLSGVVSVAAGSSYSLAVRSDGTVWAWGSNFSGQLGDGTTS--- 184
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ P V G VV VA GS H +A++S G ++WGAN++GQLG G
Sbjct: 185 ---NRLVPVQVPGLSG--VVSVAAGSSHSLAVLSDGS--------VWAWGANSSGQLGDG 231
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ +RL P + + V V G+ H+ L R + WT+G GQL
Sbjct: 232 TKINRLVPVQVPGLS-----GVVAVAAGAAHS--LAVRS------DGTVWTWGANSFGQL 278
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT LVP +V+ L +V+ D G +H+ + S G VW+WG L ++S +
Sbjct: 279 GDGTKSDRLVPVRVQGLSG---VVASDVGSYHSLALRSDGSVWAWGHNSSGQLGDDSSTS 335
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R+ P+ + G + V G++H++ V DG +W+WG SG G G
Sbjct: 336 RSV------PVQVRG-------LSGGMAVTAGSSHSLAVGSDG-TVWAWGSNFSGERGEG 381
Query: 351 KTIDFFAPAIV 361
T + +P V
Sbjct: 382 TTNNRASPVQV 392
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 94/305 (30%), Positives = 131/305 (42%), Gaps = 47/305 (15%)
Query: 61 EDDSKTNHKAPIK----ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
E +T+ AP++ + AG SLA+ G +W G+ L G + +
Sbjct: 31 ESAEQTSRGAPLRDAPSRARLAAGSSYSLALRPDGTVWATGSNDLGQ---LGDGTTTNHS 87
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
P V G VV VA GS H +A+ D ++WG+N++GQLG G RL
Sbjct: 88 APVQVPGLSG--VVAVAAGSSHSLAVR--------HDGTVWAWGSNSDGQLGDGTTTMRL 137
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
P ++ + V V GS ++ L R + W +G +GQLG GTT
Sbjct: 138 TPVRVQGLS-----GVVSVAAGSSYS--LAVRS------DGTVWAWGSNFSGQLGDGTTS 184
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
+ LVP QV P +VSV G H+ V S G VW+WG L + R
Sbjct: 185 NRLVPVQV---PGLSGVVSVAAGSSHSLAVLSDGSVWAWGANSSGQLGDGTKINR----- 236
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ P+ + P V VA GAAH++ V DG +W+WG G LG G D
Sbjct: 237 -LVPVQV-------PGLSGVVAVAAGAAHSLAVRSDG-TVWTWGANSFGQLGDGTKSDRL 287
Query: 357 APAIV 361
P V
Sbjct: 288 VPVRV 292
>gi|301106605|ref|XP_002902385.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262098259|gb|EEY56311.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 545
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 136/309 (44%), Gaps = 42/309 (13%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S + PI +I + G ++ + G ++ WG D G
Sbjct: 16 LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTEEGEVYTWGR---GDDGRLGHGDNG 72
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
F P V + G + +V CGS H A+ +G+ Y+WG G+LG G+
Sbjct: 73 WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGD--------LYTWGGGMYGKLGHGNET 124
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ET V +V CGS HT +L K +T+G ENG GHG
Sbjct: 125 GHSTPYLVETLK---SMQVRQVACGSRHTVVLLENKD--------VYTWGDKENGVSGHG 173
Query: 234 TTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
T+ +P V+EL + CG FHT+ +S G+V+++G K L N+ RN
Sbjct: 174 DTEGHQYLPCPVEELRGKSIVQISACG-FHTAALSEFGEVFTFGEGKFGRLGHNSE--RN 230
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ P+ + G + + QVACG HT VT+ G ++++WG G G LG G
Sbjct: 231 Q------PVARFVDALAGKRVK---QVACGGFHTAAVTETG-EVYTWGGGEHGQLGHGDK 280
Query: 353 IDFFAPAIV 361
++ P V
Sbjct: 281 VNKTVPTRV 289
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 28/201 (13%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
+ YSWG +GQLGLGD + RP I+ + + ++ CGS HT +LT
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERR---IVQIACGSGHTVVLTE------ 51
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
E +T+G G++G+LGHG VP V+EL + + V CG +HT+ V+ +GD++
Sbjct: 52 --EGEVYTWGRGDDGRLGHGDNGWKFVPRLVEEL-RGKNIRQVTCGSYHTAAVTVSGDLY 108
Query: 274 SW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+W GM LG NE G + +P L+ K QVACG+ HTV++ +
Sbjct: 109 TWGGGMYGKLG-------HGNETGHS-TPYLVE-----TLKSMQVRQVACGSRHTVVLLE 155
Query: 332 DGYKLWSWGRGRSGVLGTGKT 352
+ +++WG +GV G G T
Sbjct: 156 N-KDVYTWGDKENGVSGHGDT 175
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 67/270 (24%), Positives = 115/270 (42%), Gaps = 41/270 (15%)
Query: 64 SKTNHKAP--------IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSL 112
++T H P +++ V G ++ + ++ WG N TEG
Sbjct: 122 NETGHSTPYLVETLKSMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG---- 177
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P PV + G ++V+++ H AL GE +++G G+LG
Sbjct: 178 -HQYLPCPVEELRGKSIVQISACGFHTAALSEFGE--------VFTFGEGKFGRLGHNSE 228
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
++ + ++ + V +V CG FHTA +T +T+G GE+GQLGH
Sbjct: 229 RNQPVARFVDAL---AGKRVKQVACGGFHTAAVTETGE--------VYTWGGGEHGQLGH 277
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLT 290
G + VP +V+ L + + L + CG HT ++ G+V++WG LG A +T
Sbjct: 278 GDKVNKTVPTRVESLLEKLVL-QITCGWSHTVTLTDTGEVYTWGNGDHGKLGHNDTAKVT 336
Query: 291 RNEAGDAIS---PILISGNGPHGPKFQDPV 317
+ D + I ++ H DPV
Sbjct: 337 LPKPVDVLDGKRVISVASYNEHTVALVDPV 366
>gi|222623048|gb|EEE57180.1| hypothetical protein OsJ_07117 [Oryza sativa Japonica Group]
Length = 463
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 80/235 (34%), Positives = 112/235 (47%), Gaps = 29/235 (12%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+VV ++ G+ H VAL+S G +VC SWG +GQLG GD E R P ++ D
Sbjct: 21 SVVLISAGASHSVALLSGG-------VVC-SWGRGEDGQLGHGDAEDRPVPTVLTAAFDD 72
Query: 188 SPWAVYEVT-CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+P V V CG+ HT + E +++G G+ G+LGHG + P+ ++
Sbjct: 73 APGGVASVVICGADHTTAYSDE-------ELQLYSWGWGDFGRLGHGNSSDVFNPQPIQA 125
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q V + + CG H V+ AG V SWG + N L D++ P I
Sbjct: 126 L-QGVRITQIACGDSHCLAVTVAGHVHSWGRNQ------NGQLGLGNTEDSLLPQKIQAF 178
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + + +A GA HT VT+DG L+ WG GR G LG G D P V
Sbjct: 179 --EGVRVK---MIAAGAEHTAAVTEDG-DLYGWGWGRYGNLGLGDRDDRLIPEKV 227
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/307 (28%), Positives = 134/307 (43%), Gaps = 54/307 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++I + G LA+ AG + WG N L +TE S P + F G
Sbjct: 129 VRITQIACGDSHCLAVTVAGHVHSWGRNQNGQLGLGNTE------DSLLPQKIQAFEGVR 182
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH A+ ED Y WG G LGLGDR+ RL P+ + + N
Sbjct: 183 VKMIAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRDDRLIPEKVSSVNGQK 234
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT ++ +T+G + GQLGHG + LVP +++ L
Sbjct: 235 ---MVLVACGWRHTITVSS--------SGSIYTYGWSKYGQLGHGDFEDHLVPHKLEALK 283
Query: 249 ----------QYVYLVSVDCGLFHTS----VVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ ++ D G +++ G ++ WG K + NE
Sbjct: 284 DTTISQEEAVELIFFFLGDEGFRVGGGIQWALAADGKLYGWGWNK----FGQVGVGDNE- 338
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
D SP+ ++ P Q VQVACG HT+ +T+ ++SWGRG SG LG G+ +D
Sbjct: 339 -DHCSPVQVNF-----PNEQKVVQVACGWRHTLALTE-AKNVFSWGRGTSGQLGHGEIVD 391
Query: 355 FFAPAIV 361
P ++
Sbjct: 392 RNIPKMI 398
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 132/313 (42%), Gaps = 62/313 (19%)
Query: 62 DDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-------------NCPLPDSSTEG 108
DD + + AG S+A+ + G + WG + P+P
Sbjct: 10 DDEAVPEAPERSVVLISAGASHSVALLSGGVVCSWGRGEDGQLGHGDAEDRPVPT----- 64
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
L ++F +P G V CG++H A Y E+L YSWG + G+LG
Sbjct: 65 --VLTAAFDDAP-----GGVASVVICGADHTTA-------YSDEELQLYSWGWGDFGRLG 110
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G+ P+ I+ + ++ CG H +T + ++G +NG
Sbjct: 111 HGNSSDVFNPQPIQALQGVR---ITQIACGDSHCLAVT--------VAGHVHSWGRNQNG 159
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPN 286
QLG G T+ +L+P++++ + V + + G HT+ V+ GD+ W WG LGL
Sbjct: 160 QLGLGNTEDSLLPQKIQAF-EGVRVKMIAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--- 215
Query: 287 ASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
+ D + P +S NG Q V VACG HT+ V+ G ++++G + G
Sbjct: 216 -----GDRDDRLIPEKVSSVNG------QKMVLVACGWRHTITVSSSG-SIYTYGWSKYG 263
Query: 346 VLGTGKTIDFFAP 358
LG G D P
Sbjct: 264 QLGHGDFEDHLVP 276
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 44/95 (46%), Gaps = 11/95 (11%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D Y WG N GQ+G+GD E P + N+ V +V CG HT LT K
Sbjct: 318 DGKLYGWGWNKFGQVGVGDNEDHCSPVQVNFPNEQK---VVQVACGWRHTLALTEAKN-- 372
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+++G G +GQLGHG +P+ + L
Sbjct: 373 ------VFSWGRGTSGQLGHGEIVDRNIPKMIDAL 401
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV+VACG H +AL A + SWG +GQLG G+ R PK+I+ + D
Sbjct: 354 VVQVACGWRHTLALTEAKNVF--------SWGRGTSGQLGHGEIVDRNIPKMIDALSSD 404
>gi|170050907|ref|XP_001861523.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
gi|167872400|gb|EDS35783.1| hect E3 ubiquitin ligase [Culex quinquefasciatus]
Length = 4784
Score = 102 bits (254), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 140/295 (47%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG + G + V+ P + +
Sbjct: 2994 VKKVAVHSGGKHAMALTLDGKVFSWGEG---EDGKLGHGNRVTLEKPKLLESLRTKRIRD 3050
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK++
Sbjct: 3051 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNCTQLKPKLVTALQGHR--- 3099
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + E + +++G G+ G+LG G ++ VP QV+ L V
Sbjct: 3100 VVQVACGSRDAQTLCLTE------EGLVFSWGDGDFGKLGRGGSEGCSVPHQVERL-NGV 3152
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V ++CG + ++ G+VW+WG KG LG + + + +PI G
Sbjct: 3153 GVVQIECGAQFSLALTKIGEVWTWG--KGDYYRLGHGTDQHVRKP------TPI----QG 3200
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G K + VA GA H + VTD G ++++WG G G+G T+ P +VL
Sbjct: 3201 LRGKKV---IHVAVGALHCLAVTDSG-QVFAWGDNDHGQQGSGNTVVNKKPNLVL 3251
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 114/258 (44%), Gaps = 46/258 (17%)
Query: 111 SLVSSFTPSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
S + P V G +V+++A C H +AL SAGE Y SWGA G+LG
Sbjct: 561 SCAETVAPKLVEGLEGVSVIQIAAHCEGRHAMALSSAGEVY--------SWGAGEGGRLG 612
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
GD S+ P I Q V + G+ ++A ++ +T+G G G
Sbjct: 613 HGDTASKEVPTKIALEKQ-----VTAIYAGASYSAAVSSVGE--------LFTWGRGTYG 659
Query: 229 QLGHGTTQSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGL 283
+LGHG + VP QV+ L Y V V++ G H+ V+ G +++WG + G G
Sbjct: 660 RLGHGNSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGGLLFAWGDGDFGKLGNGS 719
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
C + L P+ I G ++ G+ +V ++ DG L+SWG+G
Sbjct: 720 CNGSPL----------PVQIEG-------VSSVARIYSGSQFSVALSYDG-TLYSWGKGH 761
Query: 344 SGVLGTGKTIDFFAPAIV 361
G LG G + P +V
Sbjct: 762 GGRLGHGNSEHSNVPKLV 779
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 55/274 (20%)
Query: 117 TPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
TP+ V + KVA G +H +AL S GE + SWG +G+LG G+R+S
Sbjct: 4019 TPTLVESLQHVIIKKVAVNSGGKHCLALSSDGEVF--------SWGEGEDGKLGHGNRDS 4070
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
RPK+IE S V ++ CGS H+A +T + T+G G G+LGHG
Sbjct: 4071 YDRPKLIEAL---SGIGVVDIACGSAHSACITS--------QGHVLTWGKGRYGRLGHGD 4119
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--------GLGLCP- 285
++ L P++ V ++ CG+ T++++S + G GLG+
Sbjct: 4120 SEDQLQPKRC------VLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIKV 4173
Query: 286 ------NASLTRNEA----GDAISPILISGNGPH--GPKFQDPVQ------VACGAAHTV 327
+ +LTR+ + G L GN H PK +Q +A G+ H V
Sbjct: 4174 ECGSQFSVALTRSGSVYTWGKGDYHRLGHGNTDHVRRPKKVAALQGKKIISIATGSLHCV 4233
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+D G ++++WG G LG G P +V
Sbjct: 4234 ACSDSG-EVFTWGDNDEGQLGDGTVTAIQRPRLV 4266
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 63/290 (21%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + S P + G VV
Sbjct: 4031 IKKVAVNSGGKHCLALSSDGEVFSWGEG---EDGKLGHGNRDSYDRPKLIEALSGIGVVD 4087
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK------------ 179
+ACGS H + S G +WG G+LG GD E +L+PK
Sbjct: 4088 IACGSAHSACITSQGHV--------LTWGKGRYGRLGHGDSEDQLQPKRCVLRTTIMCGV 4139
Query: 180 ----IIETFNQDSPW--------------AVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
I+ + ++ P V +V CGS + LT +T
Sbjct: 4140 GVTAIMASLAEEVPMGARSPMKIESLAGLGVIKVECGSQFSVALTR--------SGSVYT 4191
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G G+ +LGHG T P++V L Q ++S+ G H S +G+V++WG +
Sbjct: 4192 WGKGDYHRLGHGNTDHVRRPKKVAAL-QGKKIISIATGSLHCVACSDSGEVFTWG-DNDE 4249
Query: 282 GLCPNASLTRNEAGDAISPILI-SGNGPHGPKFQDPVQVACGAAHTVLVT 330
G + ++T + P L+ S G H V+V CG+AHT+ ++
Sbjct: 4250 GQLGDGTVTAIQ-----RPRLVQSLQGKH------IVKVICGSAHTLALS 4288
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 30/204 (14%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 209
+D Y+ G NG+LGLG + P+ + NQ + V +V G H LT
Sbjct: 2957 QDGKLYACGEGTNGRLGLGHNNNVPTPRQVPILNQ---YVVKKVAVHSGGKHAMALT--- 3010
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
L+ +++G GE+G+LGHG + P+ ++ L + + + CG H++ ++S+
Sbjct: 3011 -----LDGKVFSWGEGEDGKLGHGNRVTLEKPKLLESL-RTKRIRDIACGSSHSAAITSS 3064
Query: 270 GDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHT 326
G++++WG+ E G L + + P L++ H VQVACG+ A T
Sbjct: 3065 GELYTWGLGEYG-------RLGHGDNCTQLKPKLVTALQGH-----RVVQVACGSRDAQT 3112
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTG 350
+ +T++G ++SWG G G LG G
Sbjct: 3113 LCLTEEGL-VFSWGDGDFGKLGRG 3135
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+G D+ + T ++ ++ AG S A+ + G L+ WG T G
Sbjct: 611 LGHGDTASKEVPTKIALEKQVTAIYAGASYSAAVSSVGELFTWGR------GTYGRLGHG 664
Query: 114 SS---FTPSPVWDFHGHTVVKVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+S F P+ V + VV VA GS H +A+ G + ++WG + G+LG
Sbjct: 665 NSDDKFVPTQVQALKAYKVVDVALGSGDAHSMAVTDGG--------LLFAWGDGDFGKLG 716
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G P IE + +V + GS + L++ + +++G G G
Sbjct: 717 NGSCNGSPLPVQIEGVS-----SVARIYSGSQFSVALSY--------DGTLYSWGKGHGG 763
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
+LGHG ++ + VP+ V L + +V V G H ++S+G+++ WG +CP+
Sbjct: 764 RLGHGNSEHSNVPKLVHAL-EGKKIVDVAVGSAHCLALTSSGELYGWGRNDYQQICPS 820
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 33 GQLGFSGS-NSLVP--CVIEQFLTIGAP-----DSLEDDSKTNHKAPIKICS-------- 76
G+LG S + L P CV+ + G SL ++ ++P+KI S
Sbjct: 4113 GRLGHGDSEDQLQPKRCVLRTTIMCGVGVTAIMASLAEEVPMGARSPMKIESLAGLGVIK 4172
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V+ G S+A+ +G+++ WG D G + P V G ++ +A GS
Sbjct: 4173 VECGSQFSVALTRSGSVYTWGKG---DYHRLGHGNTDHVRRPKKVAALQGKKIISIATGS 4229
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H VA +GE + +WG N+ GQLG G + RP+++++ + +V
Sbjct: 4230 LHCVACSDSGEVF--------TWGDNDEGQLGDGTVTAIQRPRLVQSLQGKH---IVKVI 4278
Query: 197 CGSFHTALLT 206
CGS HT L+
Sbjct: 4279 CGSAHTLALS 4288
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 94/207 (45%), Gaps = 30/207 (14%)
Query: 159 WGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG N+ QLG G + S+++ P +Q P ++ GS +++ +
Sbjct: 2912 WGLNDKEQLG-GLKGSKVKLPTYSSVLSQLKP---IHISGGSKSLFIVSQ--------DG 2959
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSWG 276
+ G G NG+LG G + P QV L QYV V+V G H ++ G V+SWG
Sbjct: 2960 KLYACGEGTNGRLGLGHNNNVPTPRQVPILNQYVVKKVAVHSGGKHAMALTLDGKVFSWG 3019
Query: 277 M-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
E G LG +L + + +++ + +D +ACG++H+ +T G
Sbjct: 3020 EGEDGKLGHGNRVTLEKPKLLESL----------RTKRIRD---IACGSSHSAAITSSG- 3065
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG G G LG G P +V
Sbjct: 3066 ELYTWGLGEYGRLGHGDNCTQLKPKLV 3092
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 66/152 (43%), Gaps = 20/152 (13%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
+P + G V+KV CGS+ VAL +G Y +WG + +LG G+ +
Sbjct: 4158 SPMKIESLAGLGVIKVECGSQFSVALTRSGSVY--------TWGKGDYHRLGHGNTDHVR 4209
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
RPK + + + GS H + D E W G + GQLG GT
Sbjct: 4210 RPKKVAALQGKK---IISIATGSLHCVACS------DSGEVFTW--GDNDEGQLGDGTVT 4258
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ P V+ L Q ++V V CG HT +S+
Sbjct: 4259 AIQRPRLVQSL-QGKHIVKVICGSAHTLALST 4289
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/206 (32%), Positives = 96/206 (46%), Gaps = 30/206 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ GQLG D P E + P ++ G +T P+ L
Sbjct: 3947 FGWGHNHRGQLGGLDGSRIKMPTPCEALSLLRP---IQIAGGEQTLYAVT----PDGKL- 3998
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S P V+ L Q+V + V+V+ G H +SS G+V+S
Sbjct: 3999 ---YATGYGAGGRLGIGGTDSVSTPTLVESL-QHVIIKKVAVNSGGKHCLALSSDGEVFS 4054
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG S R + +A+S I + V +ACG+AH+ +T
Sbjct: 4055 WGEGEDGKLGHGNRDSYDRPKLIEALSGIGV-------------VDIACGSAHSACITSQ 4101
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAP 358
G+ L +WG+GR G LG G + D P
Sbjct: 4102 GHVL-TWGKGRYGRLGHGDSEDQLQP 4126
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/267 (23%), Positives = 116/267 (43%), Gaps = 49/267 (18%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGF----SLVSSFTPSPVWDFHGHTVVKVACGS 136
G ++A+ +AG ++ WG + EGG S P+ + V + G+
Sbjct: 588 GRHAMALSSAGEVYSWG-------AGEGGRLGHGDTASKEVPTKI--ALEKQVTAIYAGA 638
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
+ A+ S GE ++WG G+LG G+ + + P ++ + V +V
Sbjct: 639 SYSAAVSSVGE--------LFTWGRGTYGRLGHGNSDDKFVPTQVQALK---AYKVVDVA 687
Query: 197 CGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
GS H+ +T + + +G G+ G+LG+G+ + +P Q++ + +
Sbjct: 688 LGSGDAHSMAVTD--------GGLLFAWGDGDFGKLGNGSCNGSPLPVQIEGVSSVARIY 739
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
S G + +S G ++SWG KG G L + + P L+ H + +
Sbjct: 740 S---GSQFSVALSYDGTLYSWG--KGHG----GRLGHGNSEHSNVPKLV-----HALEGK 785
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGR 341
V VA G+AH + +T G +L+ WGR
Sbjct: 786 KIVDVAVGSAHCLALTSSG-ELYGWGR 811
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ ++G ++ WG+ D +G + V + P+ V G V +V
Sbjct: 3205 KVIHVAVGALHCLAVTDSGQVFAWGD---NDHGQQGSGNTVVNKKPNLVLGLDGVFVNRV 3261
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3262 ACGSSHSVA 3270
>gi|350405799|ref|XP_003487554.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Bombus impatiens]
Length = 5118
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 149/334 (44%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S +VP ++E +K +V +GG LA+ + G
Sbjct: 4322 GRLGIGGTDSVMVPTLLESI----------------QHVFVKKVAVNSGGKHCLALSSEG 4365
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + + P + + G +V +ACG H A+ SAG
Sbjct: 4366 HVYSWGEG---DDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAG----- 4417
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD E +L PK++E QD + V +V CGS L
Sbjct: 4418 ---WLYTWGKGRYGRLGHGDSEDQLTPKLVEAL-QD--YKVIDVACGSGDAQTLCVTDDD 4471
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + +P +++ L + ++ V+CG + ++ +G
Sbjct: 4472 N------VWSWGDGDYGKLGRGGSDGCKIPMKIESLAG-LGVIKVECGSQFSVALTRSGA 4524
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
+++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4525 IYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4569
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
TD G ++++WG G LG G T P +V
Sbjct: 4570 ACTDKG-EVFTWGDNDEGQLGDGTTSALQRPRLV 4602
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + VS P + +
Sbjct: 3341 IKKVAVHSGGKHALALTQDGKIFSWGE---GEDGKLGHGNSVSLDKPRLIESLKSKRIRD 3397
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++++PK++++
Sbjct: 3398 IACGSGHSAAITSSGE--------LYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQR--- 3446
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + +++G G+ G+LG G + P + L
Sbjct: 3447 VIQVACGSRDAQTMALT--------ADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRL-N 3497
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V ++CG + ++ G+VW+WG KG L P L+ G
Sbjct: 3498 GLGVVQIECGAQFSLALTKYGEVWTWG--KG----DYFRLGHGNDHHVRKPTLV--EGLR 3549
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G TI P++V
Sbjct: 3550 GKKV---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGSTIVNKKPSLV 3597
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 127/275 (46%), Gaps = 41/275 (14%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVVKVACGSEHVVALVSAGETY 149
A+++WG L D GG L S PV+ + +A GS+ + + G+
Sbjct: 3255 AVYVWG---LNDKDQLGG--LKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGK-- 3307
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
Y+ G NG+LGLGD + PK+I +Q V V G H LT
Sbjct: 3308 ------LYACGEGTNGRLGLGDDSNVCEPKLIPFLSQYMIKKV-AVHSGGKHALALTQ-- 3358
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +++G GE+G+LGHG + S P ++ L + + + CG H++ ++S+
Sbjct: 3359 ------DGKIFSWGEGEDGKLGHGNSVSLDKPRLIESL-KSKRIRDIACGSGHSAAITSS 3411
Query: 270 GDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHT 326
G++++WG+ E G L + + P L+ Q +QVACG+ A T
Sbjct: 3412 GELYTWGLGEYG-------RLGHGDTATQMKPKLV-----QSLVGQRVIQVACGSRDAQT 3459
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +T DG ++SWG G G LG G + + P ++
Sbjct: 3460 MALTADG-SVYSWGDGDFGKLGRGGSDGCYTPLLI 3493
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 56/268 (20%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V+ F V +A S+ H +AL +D YSWG + G+LG GDR
Sbjct: 486 PQRVYGFSEKPVTMIASHSDGTHYLALT--------QDSSVYSWGNGDGGRLGHGDRVWY 537
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
PK++E + + + CGS ++A+L+ +T+G G G+LGHG +
Sbjct: 538 DEPKLVEALVDKN---ITFIACGSTYSAVLSSNGE--------LYTWGRGNYGRLGHGNS 586
Query: 236 QSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
+ L+P V L + V V+ G T V+++G V+SWG + G G C
Sbjct: 587 DNVLIPTLVTALNGHMVVYVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC------ 640
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRS 344
+G PK D + +V CG + +T G ++++WG+G
Sbjct: 641 ---------------DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG-EVYTWGKGEG 684
Query: 345 GVLGTGKTIDFFAPAI--VLWPPLTEEF 370
LG G P + VL P +E
Sbjct: 685 YRLGHGNEEHIRYPKVIEVLKPKKVKEL 712
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P + E+ + P ++T G +T +
Sbjct: 4262 YGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP---VQLTGGEQTLLAVT--------AD 4310
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S +VP ++ + Q+V++ V+V+ G H +SS G V+S
Sbjct: 4311 GKVYATGYGAAGRLGIGGTDSVMVPTLLESI-QHVFVKKVAVNSGGKHCLALSSEGHVYS 4369
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG E G + + + I +L + + V +ACG H+ +T G+
Sbjct: 4370 WG-EGDDGKLGHGNRLMYDRPKLIEELLGT----------EIVDIACGGHHSAAITSAGW 4418
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG G + D P +V
Sbjct: 4419 -LYTWGKGRYGRLGHGDSEDQLTPKLV 4444
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 90/206 (43%), Gaps = 27/206 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S + + G L+ WG + G + + P+ V +GH VV VA
Sbjct: 551 ITFIACGSTYSAVLSSNGELYTWGRG---NYGRLGHGNSDNVLIPTLVTALNGHMVVYVA 607
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS + + ++G + +SWG N G+LG G + PKI++ +
Sbjct: 608 CGSGDSQTLCVTASG--------IVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAK 659
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQY 250
VY CG +A LT +T+G GE +LGHG + P+ ++ L P+
Sbjct: 660 VY---CGGQFSAALTAYGE--------VYTWGKGEGYRLGHGNEEHIRYPKVIEVLKPKK 708
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWG 276
V + V G FH ++ V+ WG
Sbjct: 709 VKELCV--GNFHVLALTEDQLVYGWG 732
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G V+KV CGS+
Sbjct: 4459 SGDAQTLCVTDDDNVWSWGDG---DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF 4515
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 4516 SVALTRSG--------AIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4564
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4565 SLHCVACTDKGE--------VFTWGDNDEGQLGDGTTSALQRPRLVHAL-QGKKITRVAC 4615
Query: 259 GLFHT 263
G HT
Sbjct: 4616 GSAHT 4620
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ G SLA+ G +W WG D G + P+ V G VV VA
Sbjct: 3501 VVQIECGAQFSLALTKYGEVWTWGK---GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVA 3557
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P ++ + V
Sbjct: 3558 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGSTIVNKKPSLVHELDDAR---VN 3606
Query: 194 EVTCGSFHT 202
V+CGS H+
Sbjct: 3607 RVSCGSSHS 3615
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 67/164 (40%), Gaps = 24/164 (14%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + +G ++ WG+ + G S TP V V KV CG +
Sbjct: 610 SGDSQTLCVTASGIVFSWGDG---NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQF 666
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
AL + GE Y +WG +LG G+ E PK+IE P V E+ G
Sbjct: 667 SAALTAYGEVY--------TWGKGEGYRLGHGNEEHIRYPKVIEVLK---PKKVKELCVG 715
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
+FH LT + + + +G + GQ+ +VPE
Sbjct: 716 NFHVLALTE--------DQLVYGWGRNDYGQIDPAL--GTIVPE 749
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
C + M+L D G+++ WG+ D G +TP + +G VV++ C
Sbjct: 3452 CGSRDAQTMALTAD--GSVYSWGDG---DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIEC 3506
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G++ +AL GE ++WG + +LG G+ +P ++E V
Sbjct: 3507 GAQFSLALTKYGEV--------WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK---VVH 3555
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V G+ H +T D + W G ++GQ G+G+T P V EL +
Sbjct: 3556 VAVGALHCLAVT------DTGQVYAW--GDNDHGQQGNGSTIVNKKPSLVHELDD-ARVN 3606
Query: 255 SVDCGLFHT 263
V CG H+
Sbjct: 3607 RVSCGSSHS 3615
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ + G ++ WG+ D +G S + + PS V + V +V
Sbjct: 3552 KVVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGSTIVNKKPSLVHELDDARVNRV 3608
Query: 133 ACGSEHVVALV 143
+CGS H +A V
Sbjct: 3609 SCGSSHSIAWV 3619
>gi|348688336|gb|EGZ28150.1| hypothetical protein PHYSODRAFT_321832 [Phytophthora sojae]
Length = 423
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 129/292 (44%), Gaps = 49/292 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG---HT 128
+K+ V GG S A+ N G L+MWG F P G +
Sbjct: 107 LKVDYVSCGGCHSAAVTNDGTLYMWGETHWGQLGLPKEFEAAHESFPVKCPLLEGVADES 166
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-------DRESRL---RP 178
VVKV+CG H AL + G Y WG ++GQLG+G D L RP
Sbjct: 167 VVKVSCGGTHTAALTNLGRVY--------VWGRGDSGQLGIGSAWLKDTDDNGLLGVSRP 218
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
++E FN + V +V CG+FH+A +T + + +G + G LG G T
Sbjct: 219 HLVEGFNGEK---VVQVACGAFHSAAVTE--------QGHVYIWGKEDYGMLGVGQTSDQ 267
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGD 296
P++V E + + V CG +HT VV+ +GD +++G E G LGL S TR
Sbjct: 268 QTPKRV-EFFDDIPALRVSCGGWHTMVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHLVK 326
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
A+ K Q +Q ACG +HT+ VT DG + GR G LG
Sbjct: 327 AL-------------KGQTVIQAACGGSHTLFVTSDGIA-YVAGRPDHGRLG 364
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 132/314 (42%), Gaps = 67/314 (21%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH--GHTVV 130
+I +V G ++A+ +GA++ WG + G L S P + F G V
Sbjct: 54 EIVAVSCGSRHTMALTASGAVYSWGWGSM---GQLGHGDLKSINVPQKIAFFEQEGLKVD 110
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V+CG H A+ + D Y WG + GQLGL PK E ++ P
Sbjct: 111 YVSCGGCHSAAVTN--------DGTLYMWGETHWGQLGL--------PKEFEAAHESFPV 154
Query: 191 -----------AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG------ 233
+V +V+CG HTA LT+ R + +G G++GQLG G
Sbjct: 155 KCPLLEGVADESVVKVSCGGTHTAALTNLGR--------VYVWGRGDSGQLGIGSAWLKD 206
Query: 234 TTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
T + L+ L + +V V CG FH++ V+ G V+ WG E L
Sbjct: 207 TDDNGLLGVSRPHLVEGFNGEKVVQVACGAFHSAAVTEQGHVYIWGKED------YGMLG 260
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
+ D +P + +F D + +V+CG HT++V G +++GRG G L
Sbjct: 261 VGQTSDQQTPKRV--------EFFDDIPALRVSCGGWHTMVVAKSG-DCYAFGRGEYGRL 311
Query: 348 GTGKTIDFFAPAIV 361
G G T P +V
Sbjct: 312 GLGDTKSRTRPHLV 325
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G S A+ G +++WG D G TP V F ++V
Sbjct: 228 KVVQVACGAFHSAAVTEQGHVYIWGK---EDYGMLGVGQTSDQQTPKRVEFFDDIPALRV 284
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG H + + +G+ CY++G G+LGLGD +SR RP +++ + V
Sbjct: 285 SCGGWHTMVVAKSGD--------CYAFGRGEYGRLGLGDTKSRTRPHLVKALKGQT---V 333
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG HT +T + + + G ++G+LG + VP ++ P V
Sbjct: 334 IQAACGGSHTLFVTS--------DGIAYVAGRPDHGRLGMTDMKPLSVPTRLDLGPIPVR 385
Query: 253 LVSV 256
VS
Sbjct: 386 QVSA 389
>gi|376260724|ref|YP_005147444.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
gi|373944718|gb|AEY65639.1| RCC1 domain-containing protein, alpha-tubulin suppressor
[Clostridium sp. BNL1100]
Length = 985
Score = 102 bits (254), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 43/316 (13%)
Query: 46 CVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSS 105
C + +G ++++ +S + K+ S+ AG S+A+ + G +W WG D
Sbjct: 199 CGENDYGQLGNNNTIDINSPIPVEGLNKVSSISAGKYYSMALKSDGTVWTWGE---NDYG 255
Query: 106 TEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
G + + +P V + G ++ ++ G+ H +AL +D ++WG N +G
Sbjct: 256 QLGDGTTATRLSPVQVQNLSG--IIAISSGNSHSLAL--------KDDGTVWAWGDNESG 305
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
QLG G S+ P ++ + + ++CG +++ L + + W +G
Sbjct: 306 QLGDGTTNSKYIPSQVQGLS-----GIVSISCGFYYSMALKN--------DGTVWVWGDN 352
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+GQLG GTT V L ++++ CG+ H+ + + G VW+WG L
Sbjct: 353 TSGQLGDGTTTDRNTAVPVSGLDG---VIAIACGVNHSMALRNDGTVWTWGFNAFGQLGD 409
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
+++N A + ISG + + CG +H++ + DDG +W+WG + G
Sbjct: 410 GTKVSKNTA------VPISG-------LDGIIAITCGTSHSMALKDDG-TVWAWGDNQYG 455
Query: 346 VLGTGKTIDFFAPAIV 361
LG G I P+ V
Sbjct: 456 QLGNGTFISNTTPSQV 471
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 125/280 (44%), Gaps = 43/280 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G +LA+++ G +W C D G + + +P PV + V ++
Sbjct: 177 IIKVSGGESHTLALESDGTVWA---CGENDYGQLGNNNTIDINSPIPVEGLN--KVSSIS 231
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G + +AL S G ++WG N+ GQLG G +RL P ++ + +
Sbjct: 232 AGKYYSMALKSDG--------TVWTWGENDYGQLGDGTTATRLSPVQVQNLS-----GII 278
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ G+ H+ L + W +G E+GQLG GTT S +P QV+ L +
Sbjct: 279 AISSGNSHSLALKD--------DGTVWAWGDNESGQLGDGTTNSKYIPSQVQGLSG---I 327
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
VS+ CG +++ + + G VW WG L + RN A + +SG
Sbjct: 328 VSISCGFYYSMALKNDGTVWVWGDNTSGQLGDGTTTDRNTA------VPVSG-------L 374
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ +ACG H++ + +DG +W+WG G LG G +
Sbjct: 375 DGVIAIACGVNHSMALRNDG-TVWTWGFNAFGQLGDGTKV 413
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 118/279 (42%), Gaps = 43/279 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I S+ G S+A+ N G +W+WG+ S G + T PV G V+ +A
Sbjct: 327 IVSISCGFYYSMALKNDGTVWVWGDNT---SGQLGDGTTTDRNTAVPVSGLDG--VIAIA 381
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H +AL + G ++WG N GQLG G + S+ I + +
Sbjct: 382 CGVNHSMALRNDG--------TVWTWGFNAFGQLGDGTKVSKNTAVPISGLD-----GII 428
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+TCG+ H+ L + W +G + GQLG+GT S P QV L +
Sbjct: 429 AITCGTSHSMALKD--------DGTVWAWGDNQYGQLGNGTFISNTTPSQVSNLSG---I 477
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
S+ CG + + G VW+WG + G TR I P
Sbjct: 478 KSIFCGYSTSFALKPDGTVWAWGNNE-YGELGKGFTTR-----VIYP-------TETLNI 524
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
D ++ G++H + + +DG +W+WG R G LG G T
Sbjct: 525 GDIKAISIGSSHCLALKNDG-TVWAWGDNRYGQLGDGTT 562
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/309 (25%), Positives = 125/309 (40%), Gaps = 49/309 (15%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + +P++ I ++ +G SLA+ + G +W WG+ +S G +
Sbjct: 257 LGDGTTATRLSPVQVQNLSGIIAISSGNSHSLALKDDGTVWAWGD---NESGQLGDGTTN 313
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S + PS V G +V ++CG + +AL + G + WG N +GQLG G
Sbjct: 314 SKYIPSQVQGLSG--IVSISCGFYYSMALKNDG--------TVWVWGDNTSGQLGDGTTT 363
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R + + V + CG H+ L + + WT+G GQLG G
Sbjct: 364 DRNTAVPVSGLD-----GVIAIACGVNHSMALRN--------DGTVWTWGFNAFGQLGDG 410
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T S + L ++++ CG H+ + G VW+WG + G N + N
Sbjct: 411 TKVSKNTAVPISGLDG---IIAITCGTSHSMALKDDGTVWAWG-DNQYGQLGNGTFISNT 466
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+S + G K + CG + + + DG +W+WG G LG G T
Sbjct: 467 TPSQVSNL-------SGIK-----SIFCGYSTSFALKPDG-TVWAWGNNEYGELGKGFTT 513
Query: 354 DFFAPAIVL 362
P L
Sbjct: 514 RVIYPTETL 522
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 80/333 (24%), Positives = 128/333 (38%), Gaps = 69/333 (20%)
Query: 67 NHKAPIK----ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW 122
N PI I ++ G S+A+ + G +W WG+ G + +S+ TPS V
Sbjct: 416 NTAVPISGLDGIIAITCGTSHSMALKDDGTVWAWGDNQYGQ---LGNGTFISNTTPSQVS 472
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+ G + + CG AL G ++WG N G+LG G + P E
Sbjct: 473 NLSG--IKSIFCGYSTSFALKPDG--------TVWAWGNNEYGELGKGFTTRVIYPT--E 520
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
T N + ++ GS H L + + W +G GQLG GTT +P
Sbjct: 521 TLNIGD---IKAISIGSSHCLALKN--------DGTVWAWGDNRYGQLGDGTTTIKSLPV 569
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----------------------G 280
QV + + ++ G H+ + S G VW+WG G
Sbjct: 570 QVSGISG---ITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKEDRNTPVQVSELSG 626
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHG---PKFQDPVQVA---------CGAAHTVL 328
+ + N + R+ A + + G+ + K P+Q++ CG H +
Sbjct: 627 ITVISNC-IYRSFALKNDGTVWVWGSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLA 685
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +DG +W+WG+ G G G T P V
Sbjct: 686 LKNDG-TVWAWGKNNFGQFGDGTTTTTNIPVQV 717
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 68/304 (22%), Positives = 113/304 (37%), Gaps = 68/304 (22%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGF 110
L D + T P++ I ++ AGG SLA+ + G +W WG L D + E
Sbjct: 557 LGDGTTTIKSLPVQVSGISGITAISAGGSHSLALKSDGTVWAWGQNNVGQLGDGTKE--- 613
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V + G TV+ + + S+ N+G + +
Sbjct: 614 ---DRNTPVQVSELSGITVI---------------------SNCIYRSFALKNDGTVWVW 649
Query: 171 DRESRLRP--KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
+S P K+ + + CG++H L + + W +G G
Sbjct: 650 GSDSYNLPLEKMTMPIQISGLSGIIAIECGTYHNLALKN--------DGTVWAWGKNNFG 701
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
Q G GTT + +P QV L + ++ G + + S G VW WG + + P+
Sbjct: 702 QFGDGTTTTTNIPVQVSGLSG---VKAIAVGGNRSIALKSDGTVWQWGRIL-VSVSPSTV 757
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
T A + D + ++ V + +DG K+++WG G LG
Sbjct: 758 ETWTTA-----------------RQVDGLSEIVSISNNVALKNDG-KVFTWGANDYGQLG 799
Query: 349 TGKT 352
G T
Sbjct: 800 DGTT 803
>gi|340711630|ref|XP_003394376.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase
HERC2-like [Bombus terrestris]
Length = 5151
Score = 102 bits (253), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 91/334 (27%), Positives = 149/334 (44%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G++S +VP ++E +K +V +GG LA+ + G
Sbjct: 4355 GRLGIGGTDSVMVPTLLESI----------------QHVFVKKVAVNSGGKHCLALSSEG 4398
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + + P + + G +V +ACG H A+ SAG
Sbjct: 4399 HVYSWGEG---DDGKLGHGNRLMYDRPKLIEELLGTEIVDIACGGHHSAAITSAG----- 4450
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD E +L PK++E QD + V +V CGS L
Sbjct: 4451 ---WLYTWGKGRYGRLGHGDSEDQLTPKLVEAL-QD--YKVIDVACGSGDAQTLCVTDDD 4504
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + +P +++ L + ++ V+CG + ++ +G
Sbjct: 4505 N------VWSWGDGDYGKLGRGGSDGCKIPMKIESLAG-LGVIKVECGSQFSVALTRSGA 4557
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
+++WG KG LG + + R A+ G K + +A G+ H V
Sbjct: 4558 IYTWG--KGDYHRLGHGTDDHVRRPRKVAAL----------QGKKI---ISIATGSLHCV 4602
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
TD G ++++WG G LG G T P +V
Sbjct: 4603 ACTDKG-EVFTWGDNDEGQLGDGTTSALQRPRLV 4635
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + VS P + +
Sbjct: 3346 IKKMAVHSGGKHALALTQDGKIFSWGE---GEDGKLGHGNSVSLDKPRLIESLKSKRIRD 3402
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++++PK++++
Sbjct: 3403 IACGSGHSAAITSSGE--------LYTWGLGEYGRLGHGDTATQMKPKLVQSLVGQR--- 3451
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + +++G G+ G+LG G + P + L
Sbjct: 3452 VIQVACGSRDAQTMALT--------ADGSVYSWGDGDFGKLGRGGSDGCYTPLLIDRL-N 3502
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V ++CG + ++ G+VW+WG KG L P L+ G
Sbjct: 3503 GLGVVQIECGAQFSLALTKYGEVWTWG--KG----DYFRLGHGNDHHVRKPTLV--EGLR 3554
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G TI P++V
Sbjct: 3555 GKKV---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGSTIVNKKPSLV 3602
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 128/276 (46%), Gaps = 43/276 (15%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVVKVACGSEHVVALVSAGETY 149
A+++WG L D GG L S PV+ + +A GS+ + + G+
Sbjct: 3260 AVYVWG---LNDKDQLGG--LKGSKIKLPVYSEVLSKLKPIHIAGGSKTLFVVSQEGK-- 3312
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE--VTCGSFHTALLTH 207
Y+ G NG+LGLGD + PK+I +Q + + + V G H LT
Sbjct: 3313 ------LYACGEGTNGRLGLGDDSNVCEPKLIPFLSQ---YMIKKMAVHSGGKHALALTQ 3363
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ +++G GE+G+LGHG + S P ++ L + + + CG H++ ++
Sbjct: 3364 --------DGKIFSWGEGEDGKLGHGNSVSLDKPRLIESL-KSKRIRDIACGSGHSAAIT 3414
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
S+G++++WG+ + L + + P L+ Q +QVACG+ A
Sbjct: 3415 SSGELYTWGLGE------YGRLGHGDTATQMKPKLV-----QSLVGQRVIQVACGSRDAQ 3463
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ +T DG ++SWG G G LG G + + P ++
Sbjct: 3464 TMALTADG-SVYSWGDGDFGKLGRGGSDGCYTPLLI 3498
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 112/258 (43%), Gaps = 56/258 (21%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V+ F V +A S+ H +AL +D YSWG + G+LG GDR
Sbjct: 494 PQRVYGFSEKPVTMIASHSDGTHYLALT--------QDSSVYSWGNGDGGRLGHGDRVWY 545
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
PK++E + + + CGS ++A+L+ +T+G G G+LGHG +
Sbjct: 546 DEPKLVEALVDKN---ITFIACGSTYSAVLSSNGE--------LYTWGRGNYGRLGHGNS 594
Query: 236 QSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASL 289
+ L+P V L ++ +V V CG T V+++G V+SWG + G G C
Sbjct: 595 DNVLIPTLVTALNGHM-VVHVACGSGDSQTLCVTASGIVFSWGDGNYGKLGRGGC----- 648
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGR 343
+G PK D + +V CG + +T G ++++WG+G
Sbjct: 649 ----------------DGSKTPKIVDKLLDINVAKVYCGGQFSAALTAYG-EVYTWGKGE 691
Query: 344 SGVLGTGKTIDFFAPAIV 361
LG G P ++
Sbjct: 692 GYRLGHGNEEHIRYPKVI 709
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 97/207 (46%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P + E+ + P ++T G +T +
Sbjct: 4295 YGWGHNHRGQLGGLEGAKVKLPVLCESLSALRP---VQLTGGEQTLLAVT--------AD 4343
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T S +VP ++ + Q+V++ V+V+ G H +SS G V+S
Sbjct: 4344 GKVYATGYGAAGRLGIGGTDSVMVPTLLESI-QHVFVKKVAVNSGGKHCLALSSEGHVYS 4402
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG E G + + + I +L + + V +ACG H+ +T G+
Sbjct: 4403 WG-EGDDGKLGHGNRLMYDRPKLIEELLGT----------EIVDIACGGHHSAAITSAGW 4451
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG G + D P +V
Sbjct: 4452 -LYTWGKGRYGRLGHGDSEDQLTPKLV 4477
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 87/205 (42%), Gaps = 25/205 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S + + G L+ WG + G + + P+ V +GH VV VA
Sbjct: 559 ITFIACGSTYSAVLSSNGELYTWGRG---NYGRLGHGNSDNVLIPTLVTALNGHMVVHVA 615
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS + + ++G + +SWG N G+LG G + PKI++ +
Sbjct: 616 CGSGDSQTLCVTASG--------IVFSWGDGNYGKLGRGGCDGSKTPKIVDKLLDINVAK 667
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
VY CG +A LT +T+G GE +LGHG + P +V E+
Sbjct: 668 VY---CGGQFSAALTAYGE--------VYTWGKGEGYRLGHGNEEHIRYP-KVIEVLXTK 715
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+ + G FH ++ V+ WG
Sbjct: 716 KVKELCVGNFHVLALTEDQLVYGWG 740
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G V+KV CGS+
Sbjct: 4492 SGDAQTLCVTDDDNVWSWGDG---DYGKLGRGGSDGCKIPMKIESLAGLGVIKVECGSQF 4548
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ + + + G
Sbjct: 4549 SVALTRSG--------AIYTWGKGDYHRLGHGTDDHVRRPRKVAALQGKK---IISIATG 4597
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4598 SLHCVACTDKGE--------VFTWGDNDEGQLGDGTTSALQRPRLVHAL-QGKKITRVAC 4648
Query: 259 GLFHT 263
G HT
Sbjct: 4649 GSAHT 4653
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 56/129 (43%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ G SLA+ G +W WG D G + P+ V G VV VA
Sbjct: 3506 VVQIECGAQFSLALTKYGEVWTWGK---GDYFRLGHGNDHHVRKPTLVEGLRGKKVVHVA 3562
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P ++ + V
Sbjct: 3563 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGSTIVNKKPSLVHELDDAR---VN 3611
Query: 194 EVTCGSFHT 202
V+CGS H+
Sbjct: 3612 RVSCGSSHS 3620
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 79/189 (41%), Gaps = 25/189 (13%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
C + M+L D G+++ WG+ D G +TP + +G VV++ C
Sbjct: 3457 CGSRDAQTMALTAD--GSVYSWGDG---DFGKLGRGGSDGCYTPLLIDRLNGLGVVQIEC 3511
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G++ +AL GE ++WG + +LG G+ +P ++E V
Sbjct: 3512 GAQFSLALTKYGEV--------WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK---VVH 3560
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V G+ H +T D + W G ++GQ G+G+T P V EL +
Sbjct: 3561 VAVGALHCLAVT------DTGQVYAW--GDNDHGQQGNGSTIVNKKPSLVHELDD-ARVN 3611
Query: 255 SVDCGLFHT 263
V CG H+
Sbjct: 3612 RVSCGSSHS 3620
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 62/152 (40%), Gaps = 22/152 (14%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + +G ++ WG+ + G S TP V V KV CG +
Sbjct: 618 SGDSQTLCVTASGIVFSWGDG---NYGKLGRGGCDGSKTPKIVDKLLDINVAKVYCGGQF 674
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
AL + GE Y +WG +LG G+ E PK+IE V E+ G
Sbjct: 675 SAALTAYGEVY--------TWGKGEGYRLGHGNEEHIRYPKVIEVLXTKK---VKELCVG 723
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+FH LT + + + +G + GQ+
Sbjct: 724 NFHVLALTE--------DQLVYGWGRNDYGQI 747
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ + G ++ WG+ D +G S + + PS V + V +V
Sbjct: 3557 KVVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGSTIVNKKPSLVHELDDARVNRV 3613
Query: 133 ACGSEHVVALV 143
+CGS H +A V
Sbjct: 3614 SCGSSHSIAWV 3624
>gi|47214126|emb|CAG01384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4628
Score = 102 bits (253), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 2818 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKAKRIRD 2874
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE YSWG G+LG GD ++LRPK+++
Sbjct: 2875 IACGSSHSAAITSSGE--------LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR--- 2923
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 2924 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 2976
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + P ++ G G
Sbjct: 2977 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK------PQMV--EGLRGK 3028
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3029 KI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3074
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 133/312 (42%), Gaps = 60/312 (19%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3844 IRKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGVEVVD 3900
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + ++GE ++WG G+LG GD E +L+PK+++
Sbjct: 3901 IAAGGAHSACITASGE--------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHR--- 3949
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + M W++G G+ G+LG G + P ++ L
Sbjct: 3950 VIDVACGSGDAQTLCLTD--------DDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSLTG 4001
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ ++ V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 4002 -LGVIKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 4048
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGY----------------KLWSWGRGRSGVLGT 349
G G K + +A G+ H V T+DG ++++WG G LG
Sbjct: 4049 QGLQGKKV---IAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGD 4105
Query: 350 GKTIDFFAPAIV 361
G T P +V
Sbjct: 4106 GTTNAIQRPRLV 4117
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S AI ++G L+ WG L + G + P V GH V++V
Sbjct: 2871 RIRDIACGSSHSAAITSSGELYSWG---LGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQV 2927
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E + +SWG + G+LG G E P+ IE N V
Sbjct: 2928 ACGSRDAQTLALTDEG------LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GV 2978
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT + WT+G G+ +LGHGT P+ V+ L +
Sbjct: 2979 CQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL-RGKK 3029
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V G H V+ G V++WG + G N + T N P L+ G +
Sbjct: 3030 IVHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLE 3078
Query: 313 FQDPVQVACGAAHTV 327
Q +VACG++H+V
Sbjct: 3079 GQKITRVACGSSHSV 3093
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 116/244 (47%), Gaps = 38/244 (15%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
++ P + +VK+A +H +AL S GE + SWG + G+LG GD
Sbjct: 443 TTLAPMLIHSLSSRKMVKLAAHPDGQHYLALSSNGEVF--------SWGCGDGGRLGHGD 494
Query: 172 RESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
P +I FN + + V + CGS ++A +T ++ +T+G G G+L
Sbjct: 495 TTYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAAIT--------VDGELYTWGRGNYGRL 546
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
GHG+++ P V L + + +V V CG T V+ G VWSWG + G
Sbjct: 547 GHGSSEDQTTPMLVTAL-KGLKVVDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----K 599
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
L R + +P L+ K Q D V+V CG+ +V +T DG ++++WG+G +
Sbjct: 600 LGRGGSDGCKTPKLVE-------KLQDLDIVKVCCGSQFSVALTKDG-QVYTWGKGDNQR 651
Query: 347 LGTG 350
LG G
Sbjct: 652 LGHG 655
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 114/267 (42%), Gaps = 37/267 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ + AGG S I +G L+ WG G P V GH V+
Sbjct: 3896 VEVVDIAAGGAHSACITASGELFTWGKGRY---GRLGHGDSEDQLKPKLVDALQGHRVID 3952
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS L +D + +SWG + G+LG G + P I++ +
Sbjct: 3953 VACGSGDAQTLCLT------DDDMVWSWGDGDYGKLGRGGSDGCKTPMKIDSL---TGLG 4003
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4004 VIKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGK 4054
Query: 252 YLVSVDCGLFHTSVVSSAG--DVWSWGMEK-GLGLCPNASLTRNEAG-------DAIS-P 300
++++ G H + G V+ WG+ + LGL + N+ G +AI P
Sbjct: 4055 KVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGEVYTWGDNDEGQLGDGTTNAIQRP 4114
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTV 327
L++ G K +VACG+AHT+
Sbjct: 4115 RLVAA--LQGKKIN---RVACGSAHTL 4136
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 137/307 (44%), Gaps = 50/307 (16%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF 110
FL + +D + T A K +++ G + + ++WG L D GG
Sbjct: 2696 FLASDNEEEDDDKAATGSLARKKSSGLESAGTIRTKV------FVWG---LNDKDQLGGL 2746
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
PS VV+VA GS+ + A+ G+ Y + G NG+LGLG
Sbjct: 2747 KGSKIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKIY--------ACGEATNGRLGLG 2798
Query: 171 DRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
+ P+ I S + V +V G H LT ++ +++G G++
Sbjct: 2799 LSSGTIPIPRQITAL---SNYVVKKVAVHSGGRHAMALT--------VDGKVFSWGEGDD 2847
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP 285
G+LGH + + P ++ L + + + CG H++ ++S+G+++SWG+ E G LG
Sbjct: 2848 GKLGHFSRMNCDKPRLIEAL-KAKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGD 2906
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGR 343
N + R P L+ H +QVACG+ A T+ +TD+G ++SWG G
Sbjct: 2907 NTTQLR--------PKLVKVLLGH-----RVIQVACGSRDAQTLALTDEGL-VFSWGDGD 2952
Query: 344 SGVLGTG 350
G LG G
Sbjct: 2953 FGKLGRG 2959
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 91/210 (43%), Gaps = 25/210 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S TP V G VV VA
Sbjct: 516 VVHIACGSTYSAAITVDGELYTWGRG---NYGRLGHGSSEDQTTPMLVTALKGLKVVDVA 572
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS +A+ G+ + SWG + G+LG G + PK++E QD
Sbjct: 573 CGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLVEKL-QD--LD 621
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS + LT + +T+G G+N +LGHGT + P+ + L Q
Sbjct: 622 IVKVCCGSQFSVALTK--------DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTL-QGK 672
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+V V G H ++ G+V SWG L
Sbjct: 673 KVVDVAVGSTHCLALTDDGEVHSWGSNDKL 702
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3750 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3806
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 3807 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKV-AVNSGGKHCL 3857
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + V +V + G H+
Sbjct: 3858 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGVEVVDIAAGGAHS 3908
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ ++++G++++WG + L ++ D + P L+ H + VACG+
Sbjct: 3909 ACITASGELFTWGKGR------YGRLGHGDSEDQLKPKLVDALQGH-----RVIDVACGS 3957
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3958 GDAQTLCLTDDDM-VWSWGDGDYGKLGRG 3985
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 2978 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVA 3034
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3035 VGALHCLAVTDTGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3083
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3084 RVACGSSHSVAWT 3096
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P + K+ ++V V + CG +++ ++ G++++
Sbjct: 480 FSWGCGDGGRLGHGDTTYLEEPTMIAAFNGKQAGKHV--VHIACGSTYSAAITVDGELYT 537
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG L + D +P+L++ K V VACG+ A T+ VT++
Sbjct: 538 WGRGN------YGRLGHGSSEDQTTPMLVTA-----LKGLKVVDVACGSGDAQTLAVTEN 586
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P +V
Sbjct: 587 G-QVWSWGDGDYGKLGRGGSDGCKTPKLV 614
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 62/160 (38%), Gaps = 21/160 (13%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 3985 GGSDGCKTPMKIDSLTGLGVIKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDH 4041
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK------------GEDLVCYSWGAN 162
P V G V+ +A GS H V G GE Y+WG N
Sbjct: 4042 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGRIKVFQWGLPRWSLGLGE---VYTWGDN 4098
Query: 163 NNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+ GQLG G + RP+++ + V CGS HT
Sbjct: 4099 DEGQLGDGTTNAIQRPRLVAALQGKK---INRVACGSAHT 4135
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3760 YGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLI----GGEQTLFAV-------TAD 3808
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 3809 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIRKVAVNSGGKHCLALSSEGEVYS 3867
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ + + V +A G AH+ +T
Sbjct: 3868 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEV-------------VDIAAGGAHSACITAS 3914
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L++WG+GR G LG G + D P +V
Sbjct: 3915 G-ELFTWGKGRYGRLGHGDSEDQLKPKLV 3942
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVA 320
H +SS G+V+SWG G G + T E P +I+ NG K V +A
Sbjct: 469 HYLALSSNGEVFSWGCGDG-GRLGHGDTTYLE-----EPTMIAAFNGKQAGKHV--VHIA 520
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG+ ++ +T DG +L++WGRG G LG G + D P +V
Sbjct: 521 CGSTYSAAITVDG-ELYTWGRGNYGRLGHGSSEDQTTPMLV 560
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3029 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3085
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3086 ACGSSHSVA 3094
>gi|410920940|ref|XP_003973941.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Takifugu rubripes]
Length = 4822
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3033 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3089
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE YSWG G+LG GD ++LRPK+++
Sbjct: 3090 IACGSSHSAAITSSGE--------LYSWGLGEYGRLGHGDNATQLRPKLVKVLLGHR--- 3138
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3139 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3191
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + P ++ G G
Sbjct: 3192 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK------PQMV--EGLRGK 3243
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3244 KI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3289
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4027 IRKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGVEVVD 4083
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + ++GE ++WG G+LG GD E +L+PK+++
Sbjct: 4084 IAAGGAHSACITASGE--------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHR--- 4132
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + M W++G G+ G+LG G + +P ++ L
Sbjct: 4133 VIDVACGSGDAQTLCLTD--------DDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSLTG 4184
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ + V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 4185 -LGVTKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 4231
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4232 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4283
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 117/244 (47%), Gaps = 38/244 (15%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
++ P + +VK+A +H +AL S GE + SWG + G+LG GD
Sbjct: 466 TTLAPMLIHSLSSRKIVKLAAHPDGQHYLALSSNGEVF--------SWGCGDGGRLGHGD 517
Query: 172 RESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
P +I FN + + V + CGS ++A++T ++ +T+G G G+L
Sbjct: 518 ATYLEEPTMIAAFNGKQAGKHVVHIACGSTYSAVIT--------IDGELYTWGRGNYGRL 569
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
GHG+++ P V L + + +V V CG T V+ G VWSWG + G
Sbjct: 570 GHGSSEDQTTPMLVTAL-KGLKVVDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----K 622
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
L R + +P L+ K Q D V+V CG+ +V +T DG ++++WG+G +
Sbjct: 623 LGRGGSDGCKTPKLVE-------KLQDLDIVKVCCGSQFSVALTKDG-QVYTWGKGDNQR 674
Query: 347 LGTG 350
LG G
Sbjct: 675 LGHG 678
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3062 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3103
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3104 GELYSWG---LGEYGRLGHGDNATQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3158
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3159 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3208
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 3209 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL-RGKKIVHVAVGALHCLAVTDTG 3262
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3263 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3308
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 136/297 (45%), Gaps = 48/297 (16%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
EDD KT A + K+ G+ S +++WG L D GG PS
Sbjct: 2919 EDDDKT---ATGSLARKKSSGLESAGTIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2971
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y + G NG+LGLG + P+
Sbjct: 2972 SETLSALNVVQVAGGSKSLFAVTVEGKIY--------ACGEATNGRLGLGLSSGTIPIPR 3023
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3024 QITAL---SNYVVKKVAVHSGGRHAMALT--------VDGKVFSWGEGDDGKLGHFSRMN 3072
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
P ++ L + + + CG H++ ++S+G+++SWG+ E G LG NA+ R
Sbjct: 3073 CDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNATQLR---- 3127
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P L+ H +QVACG+ A T+ +TD+G ++SWG G G LG G
Sbjct: 3128 ----PKLVKVLLGH-----RVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRG 3174
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ + AGG S I +G L+ WG G P V GH V+
Sbjct: 4079 VEVVDIAAGGAHSACITASGELFTWGKGRY---GRLGHGDSEDQLKPKLVDALQGHRVID 4135
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS L +D + +SWG + G+LG G + P I++ +
Sbjct: 4136 VACGSGDAQTLCLT------DDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL---TGLG 4186
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4187 VTKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGK 4237
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4238 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA--LQ 4287
Query: 310 GPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4288 GKKIN---RVACGSAHTL 4302
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 90/210 (42%), Gaps = 25/210 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S I G L+ WG + G S TP V G VV VA
Sbjct: 539 VVHIACGSTYSAVITIDGELYTWGRG---NYGRLGHGSSEDQTTPMLVTALKGLKVVDVA 595
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS +A+ G+ + SWG + G+LG G + PK++E QD
Sbjct: 596 CGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLVEKL-QD--LD 644
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS + LT + +T+G G+N +LGHGT + P+ + L Q
Sbjct: 645 IVKVCCGSQFSVALTK--------DGQVYTWGKGDNQRLGHGTDEHVRFPKLLDTL-QGK 695
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+V V G H ++ G+V SWG L
Sbjct: 696 KVVDVAVGSTHCLALTDDGEVHSWGSNDKL 725
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3933 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3989
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 3990 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKV-AVNSGGKHCL 4040
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + V +V + G H+
Sbjct: 4041 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGVEVVDIAAGGAHS 4091
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ ++++G++++WG + L ++ D + P L+ H + VACG+
Sbjct: 4092 ACITASGELFTWGKGR------YGRLGHGDSEDQLKPKLVDALQGH-----RVIDVACGS 4140
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4141 GDAQTLCLTDDDM-VWSWGDGDYGKLGRG 4168
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3193 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVA 3249
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3250 VGALHCLAVTDTGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3298
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3299 RVACGSSHSVAWT 3311
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4174 KIPMKIDSLTGLGVTKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4230
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4231 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4282
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ + V CGS HT
Sbjct: 4283 VAALQGKK---INRVACGSAHT 4301
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG P + K+ ++V V + CG +++V++ G++++
Sbjct: 503 FSWGCGDGGRLGHGDATYLEEPTMIAAFNGKQAGKHV--VHIACGSTYSAVITIDGELYT 560
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG L + D +P+L++ K V VACG+ A T+ VT++
Sbjct: 561 WGRGN------YGRLGHGSSEDQTTPMLVTA-----LKGLKVVDVACGSGDAQTLAVTEN 609
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P +V
Sbjct: 610 G-QVWSWGDGDYGKLGRGGSDGCKTPKLV 637
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3943 YGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLI----GGEQTLFAV-------TAD 3991
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 3992 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIRKVAVNSGGKHCLALSSEGEVYS 4050
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ + + V +A G AH+ +T
Sbjct: 4051 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEV-------------VDIAAGGAHSACITAS 4097
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L++WG+GR G LG G + D P +V
Sbjct: 4098 G-ELFTWGKGRYGRLGHGDSEDQLKPKLV 4125
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVA 320
H +SS G+V+SWG G L +A P +I+ NG K V +A
Sbjct: 492 HYLALSSNGEVFSWGCGDG------GRLGHGDATYLEEPTMIAAFNGKQAGKHV--VHIA 543
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG+ ++ ++T DG +L++WGRG G LG G + D P +V
Sbjct: 544 CGSTYSAVITIDG-ELYTWGRGNYGRLGHGSSEDQTTPMLV 583
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3244 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3300
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3301 ACGSSHSVA 3309
>gi|432856462|ref|XP_004068433.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Oryzias latipes]
Length = 4777
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3009 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3065
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE YSWG G+LG GD ++LRPK+++
Sbjct: 3066 IACGSSHSAAITSSGE--------LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR--- 3114
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3115 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3167
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + P ++ G G
Sbjct: 3168 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK------PQIV--EGLRGK 3219
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3220 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3265
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 134/296 (45%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3982 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGVEVVD 4038
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + ++GE ++WG G+LG GD E +L+PK+++
Sbjct: 4039 IAAGGAHSACITASGE--------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHR--- 4087
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + M W++G G+ G+LG G + VP ++ L
Sbjct: 4088 VIDVACGSGDAQTLCLTD--------DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4138
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 4139 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 4186
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4187 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4238
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 36/243 (14%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
++ P + +VK+A +H +AL ++GE Y SWG + G+LG GD
Sbjct: 431 TTLAPMLIHGLSSRKIVKLAAHPDGQHFLALSTSGEVY--------SWGCGDGGRLGHGD 482
Query: 172 RESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
P +I TF+ + + V ++ CGS ++A +T + +T+G G G+L
Sbjct: 483 ATYLEEPALITTFSGKQTGKQVVQIACGSTYSAAVT--------ADGELYTWGRGNYGRL 534
Query: 231 GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
GHG+++ P V L Q V V+ G T V+ G VWSWG + G L
Sbjct: 535 GHGSSEDVTTPMLVTALKGQKVVDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 588
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P L+ K Q D V+V CG+ +V +T DG ++++WG+G + L
Sbjct: 589 GRGGSDGCKTPKLVE-------KLQDLDIVKVCCGSQFSVALTKDG-QVYTWGKGDNQRL 640
Query: 348 GTG 350
G G
Sbjct: 641 GHG 643
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3038 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3079
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3080 GELYSWG---LGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3134
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3135 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3184
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ +G
Sbjct: 3185 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQIVEGL-RGKKIVHVAVGALHCLAVTDSG 3238
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3239 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3284
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 135/294 (45%), Gaps = 42/294 (14%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
EDD KT A + K+ G+ S A +++WG L D GG PS
Sbjct: 2895 EDDEKT---AAGSLARKKSSGLESAASIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2947
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
VV+VA GS+ + A+ G+ Y + G NG+LGLG L
Sbjct: 2948 SETLSALNVVQVAGGSKSLFAVTVEGKIY--------ACGEATNGRLGLG-----LSSGT 2994
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
I+ Q S + Y V + H+ R ++ +++G G++G+LGH + +
Sbjct: 2995 IQIPRQISALSNYVVKKVAVHSG---GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 3051
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAI 298
P ++ L + + + CG H++ ++S+G+++SWG+ E G LG N + R
Sbjct: 3052 PRLIEAL-KTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLR------- 3103
Query: 299 SPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P L+ H +QVACG+ A T+ +TD+G ++SWG G G LG G
Sbjct: 3104 -PKLVKVLLGH-----RVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRG 3150
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ + AGG S I +G L+ WG G P V GH V+
Sbjct: 4034 VEVVDIAAGGAHSACITASGELFTWGKGRY---GRLGHGDSEDQLKPKLVDALQGHRVID 4090
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS L +D + +SWG + G+LG G + P I++ +
Sbjct: 4091 VACGSGDAQTLCLT------DDDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLG 4141
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4142 VVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGK 4192
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4193 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL--Q 4242
Query: 310 GPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4243 GKKIN---RVACGSAHTL 4257
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 92/211 (43%), Gaps = 25/211 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ + G S A+ G L+ WG + G S TP V G VV V
Sbjct: 503 QVVQIACGSTYSAAVTADGELYTWGRG---NYGRLGHGSSEDVTTPMLVTALKGQKVVDV 559
Query: 133 ACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
ACGS +A+ G+ + SWG + G+LG G + PK++E QD
Sbjct: 560 ACGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLVEKL-QD--L 608
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ +V CGS + LT + +T+G G+N +LGHGT + P+ + L Q
Sbjct: 609 DIVKVCCGSQFSVALTK--------DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSL-QG 659
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+V + G H ++ G+V SWG L
Sbjct: 660 KKVVDIAVGSTHCLALTDEGEVHSWGSNDKL 690
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3169 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQIVEGLRGKKIVHVA 3225
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3226 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3274
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3275 RVACGSSHSVAWT 3287
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3888 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 3944
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3945 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3995
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + V +V + G H+
Sbjct: 3996 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGVEVVDIAAGGAHS 4046
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ ++++G++++WG + L ++ D + P L+ H + VACG+
Sbjct: 4047 ACITASGELFTWGKGR------YGRLGHGDSEDQLKPKLVDALQGH-----RVIDVACGS 4095
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4096 GDAQTLCLTDDDM-VWSWGDGDYGKLGRG 4123
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4129 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4185
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4186 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4237
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4238 VAALQGKK---INRVACGSAHTLAWSTSKPTN 4266
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 75/149 (50%), Gaps = 21/149 (14%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG P + K+ + V V + CG +++ V++ G++++
Sbjct: 468 YSWGCGDGGRLGHGDATYLEEPALITTFSGKQTGKQV--VQIACGSTYSAAVTADGELYT 525
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG L + D +P+L++ K Q V VACG+ A T+ VT++
Sbjct: 526 WGRGN------YGRLGHGSSEDVTTPMLVTAL-----KGQKVVDVACGSGDAQTLAVTEN 574
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P +V
Sbjct: 575 G-QVWSWGDGDYGKLGRGGSDGCKTPKLV 602
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVA 320
H +S++G+V+SWG G L +A P LI+ +G K VQ+A
Sbjct: 457 HFLALSTSGEVYSWGCGDG------GRLGHGDATYLEEPALITTFSGKQTGK--QVVQIA 508
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG+ ++ VT DG +L++WGRG G LG G + D P +V
Sbjct: 509 CGSTYSAAVTADG-ELYTWGRGNYGRLGHGSSEDVTTPMLV 548
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3898 YGWGHNHRGQLGGIEGAKVKVPTPTEALATLRPVQLI----GGEQTLFAV-------TAD 3946
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 3947 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 4005
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ + + V +A G AH+ +T
Sbjct: 4006 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEV-------------VDIAAGGAHSACITAS 4052
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L++WG+GR G LG G + D P +V
Sbjct: 4053 G-ELFTWGKGRYGRLGHGDSEDQLKPKLV 4080
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3220 KIVHVAVGALHCLAVTDSGQVYAWGDN---DHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3276
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3277 ACGSSHSVA 3285
>gi|426344976|ref|XP_004039179.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Gorilla gorilla gorilla]
Length = 1016
Score = 101 bits (252), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNEFGQLGLGHTESKDYPSLIEGLDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y
Sbjct: 246 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEGL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V V+ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGY-----RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
>gi|348527836|ref|XP_003451425.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Oreochromis niloticus]
Length = 4833
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 131/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3044 IKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE YSWG G+LG GD ++LRPK+++
Sbjct: 3101 IACGSSHSAAITSSGE--------LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR--- 3149
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E +++G G+ G+LG G ++ VP+ ++ L
Sbjct: 3150 VIQVACGSRDAQTLALTD------EGFVFSWGDGDFGKLGRGGSEGCNVPQNIERL-NGQ 3202
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + P ++ G G
Sbjct: 3203 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK------PQMV--EGLRGK 3254
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3255 KI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3300
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 134/296 (45%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4038 IRKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGVEVVD 4094
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + ++GE ++WG G+LG GD E +L+PK+++
Sbjct: 4095 IAAGGAHSACITASGE--------LFTWGKGRYGRLGHGDSEDQLKPKLVDALQGHR--- 4143
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + M W++G G+ G+LG G + +P ++ L
Sbjct: 4144 VIDVACGSGDAQTLCLTD--------DDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL-T 4194
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 4195 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 4242
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4243 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4294
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3073 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3114
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E +
Sbjct: 3115 GELYSWG---LGEYGRLGHGDNTTQLRPKLVKVLLGHRVIQVACGSRDAQTLALTDEGF- 3170
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3171 -----VFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3219
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 3220 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL-RGKKIVHVAVGALHCLAVTDTG 3273
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3274 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3319
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 116/244 (47%), Gaps = 38/244 (15%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
++ P + +VK+A +H +AL S GE + SWG + G+LG GD
Sbjct: 471 TTLAPMLIHVLSSRKIVKLAAHPDGQHYLALSSNGEVF--------SWGCGDGGRLGHGD 522
Query: 172 RESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
PK+I TFN + + V V CGS ++A +T + +T+G G G+L
Sbjct: 523 TTYLEEPKMIGTFNGKQAGKHVVHVACGSTYSAAIT--------ADGELYTWGRGNYGRL 574
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
GHG+++ P V + + +V V CG T V+ G VWSWG + G
Sbjct: 575 GHGSSEDQTTPMVVTAF-KGLKVVDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----K 627
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
L R + +P L+ K Q D V+V CG+ +V +T DG ++++WG+G +
Sbjct: 628 LGRGGSDGCKTPKLVE-------KLQDLDIVKVCCGSQFSVALTKDG-QVYTWGKGDNQR 679
Query: 347 LGTG 350
LG G
Sbjct: 680 LGHG 683
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 136/297 (45%), Gaps = 48/297 (16%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
EDD KT A + K G+ S A +++WG L D GG PS
Sbjct: 2930 EDDEKT---AAGSLARKKPSGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2982
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y + G NG+LGLG + P+
Sbjct: 2983 SETLSALNVVQVAGGSKSLFAVTVEGKIY--------ACGEATNGRLGLGLSSGTIPIPR 3034
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + + +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3035 QITAL---SNYVIKKVAVHSGGRHAMALT--------VDGKVFSWGEGDDGKLGHFSRMN 3083
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
P ++ L + + + CG H++ ++S+G+++SWG+ E G LG N + R
Sbjct: 3084 CDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLR---- 3138
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P L+ H +QVACG+ A T+ +TD+G+ ++SWG G G LG G
Sbjct: 3139 ----PKLVKVLLGH-----RVIQVACGSRDAQTLALTDEGF-VFSWGDGDFGKLGRG 3185
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 110/258 (42%), Gaps = 36/258 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ + AGG S I +G L+ WG G P V GH V+
Sbjct: 4090 VEVVDIAAGGAHSACITASGELFTWGKGRY---GRLGHGDSEDQLKPKLVDALQGHRVID 4146
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS L +D + +SWG + G+LG G + P I++ +
Sbjct: 4147 VACGSGDAQTLCLT------DDDMVWSWGDGDYGKLGRGGSDGCKIPMKIDSL---TGLG 4197
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4198 VVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGK 4248
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4249 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA--LQ 4298
Query: 310 GPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 GKKIN---RVACGSAHTL 4313
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 92/210 (43%), Gaps = 25/210 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ V G S AI G L+ WG + G S TP V F G VV VA
Sbjct: 544 VVHVACGSTYSAAITADGELYTWGRG---NYGRLGHGSSEDQTTPMVVTAFKGLKVVDVA 600
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS +A+ G+ + SWG + G+LG G + PK++E QD
Sbjct: 601 CGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLVEKL-QD--LD 649
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS + LT + +T+G G+N +LGHGT + P+ + L Q
Sbjct: 650 IVKVCCGSQFSVALTK--------DGQVYTWGKGDNQRLGHGTDEHVRYPKLLDSL-QGK 700
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+V V G H ++ G+V SWG L
Sbjct: 701 KVVDVAVGSTHCLALTDDGEVLSWGSNDKL 730
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3204 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVA 3260
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y +WG N++GQ G G +P +++ +
Sbjct: 3261 VGALHCLAVTDTGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3309
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3310 RVACGSSHSVAWT 3322
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4185 KIPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4241
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4242 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4293
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4294 VAALQGKK---INRVACGSAHTLAWSTSKPTN 4322
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 125/321 (38%), Gaps = 87/321 (27%)
Query: 84 SLAIDNAGALWMWGN-------------CPLPDSSTEGGFSLV----------------- 113
+L+ +G ++ WG+ +P +STE +L
Sbjct: 3944 TLSAGGSGTIYGWGHNHRGQLGGIEGAKVKVP-TSTEALATLRPVQLIGGEQTLFAVTAD 4002
Query: 114 --------------------SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKG 151
S TP+ + + KVA G +H +AL S GE
Sbjct: 4003 GKLYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKVAVNSGGKHCLALSSEGEV--- 4059
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
YSWG +G+LG G+R RP++IE+ V ++ G H+A +T
Sbjct: 4060 -----YSWGEAEDGKLGHGNRSPCDRPRVIESLRG---VEVVDIAAGGAHSACIT----- 4106
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+T+G G G+LGHG ++ L P+ V L Q ++ V CG + D
Sbjct: 4107 ---ASGELFTWGKGRYGRLGHGDSEDQLKPKLVDAL-QGHRVIDVACGSGDAQTLCLTDD 4162
Query: 272 --VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
VWSWG + G L R + P+ I G V+V CG+ +V +
Sbjct: 4163 DMVWSWG-DGDYG-----KLGRGGSDGCKIPMKIDSLTGLG-----VVKVECGSQFSVAL 4211
Query: 330 TDDGYKLWSWGRGRSGVLGTG 350
T G +++WG+G LG G
Sbjct: 4212 TKSG-AVYTWGKGDYHRLGHG 4231
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 77/149 (51%), Gaps = 21/149 (14%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V V CG +++ +++ G++++
Sbjct: 508 FSWGCGDGGRLGHGDTTYLEEPKMIGTFNGKQAGKHV--VHVACGSTYSAAITADGELYT 565
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG L + D +P++++ K V VACG+ A T+ VT++
Sbjct: 566 WGRGN------YGRLGHGSSEDQTTPMVVTAF-----KGLKVVDVACGSGDAQTLAVTEN 614
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P +V
Sbjct: 615 G-QVWSWGDGDYGKLGRGGSDGCKTPKLV 642
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3954 YGWGHNHRGQLGGIEGAKVKVPTSTEALATLRPVQLI----GGEQTLFAV-------TAD 4002
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 4003 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIRKVAVNSGGKHCLALSSEGEVYS 4061
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ + + V +A G AH+ +T
Sbjct: 4062 WGEAEDGKLGHGNRSPCDRPRVIESLRGVEV-------------VDIAAGGAHSACITAS 4108
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L++WG+GR G LG G + D P +V
Sbjct: 4109 G-ELFTWGKGRYGRLGHGDSEDQLKPKLV 4136
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H +SS G+V+SWG G G + T E I NG K V VAC
Sbjct: 497 HYLALSSNGEVFSWGCGDG-GRLGHGDTTYLEEPKMIGTF----NGKQAGKHV--VHVAC 549
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ ++ +T DG +L++WGRG G LG G + D P +V
Sbjct: 550 GSTYSAAITADG-ELYTWGRGNYGRLGHGSSEDQTTPMVV 588
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3255 KIVHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3311
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3312 ACGSSHSVA 3320
>gi|110825982|ref|NP_057407.2| E3 ISG15--protein ligase HERC5 [Homo sapiens]
gi|296434523|sp|Q9UII4.2|HERC5_HUMAN RecName: Full=E3 ISG15--protein ligase HERC5; AltName:
Full=Cyclin-E-binding protein 1; AltName: Full=HECT
domain and RCC1-like domain-containing protein 5
gi|119626425|gb|EAX06020.1| hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y
Sbjct: 246 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V V+ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGY-----RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
>gi|187954501|gb|AAI40717.1| Hect domain and RLD 5 [Homo sapiens]
Length = 1024
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y
Sbjct: 246 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V V+ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGY-----RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
>gi|6630609|dbj|BAA88519.1| cyclin-E binding protein 1 [Homo sapiens]
Length = 1024
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y
Sbjct: 246 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V V+ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGY-----RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
>gi|281205822|gb|EFA80011.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 1800
Score = 101 bits (251), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 158/334 (47%), Gaps = 51/334 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP-----SPVWDFHGH 127
K+ ++ G ++ + +G L+ +G DS G + + P S + HG
Sbjct: 1140 KVLAIATGYAHTMVLKKSGDLFTFG---WNDSGQLGLGNFKNRAVPMRIETSEIVGIHGE 1196
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +A G H + + G+ YSWGAN+ GQLG G+ E LRPK I+ +
Sbjct: 1197 RITAIAAGHSHSIMCLDNGD--------IYSWGANSKGQLGHGNIEKSLRPKQIDEL-KG 1247
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P + +++CG FHT ++ ++ CW G GE+ LG+G+ ++ L P+ + E
Sbjct: 1248 KP--IIKISCGHFHTVAIS------ELNSVYCW--GQGEHMCLGNGSNKNELSPKMI-EF 1296
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG-LGLCPNASLTR-NEAGDAISPILISG 305
+ V CGL+HT+ V++A + G ++G + +C + GD +P
Sbjct: 1297 FINKKIEKVVCGLYHTATVTAAEN----GSDRGNVYICGGGEHGKLGTGGDLKTPFF--- 1349
Query: 306 NGPHG---PKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA- 359
+ PH P + V + G+ + ++T++G L++WG G G +G GKT D + P
Sbjct: 1350 DKPHPAVIPSLNSMNIVGFSSGSEFSAIITNNG-ALYTWGYGNFGQIGNGKTEDMWLPTK 1408
Query: 360 -------IVLWPPLTEEFKQDELNTGGLDDEIKT 386
+L+ ++ F + + GL+D +K+
Sbjct: 1409 ISLNDQRFMLFNQNSKGFAKARYSQEGLEDVLKS 1442
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 115/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P + V VACG EH+ + S GE ++WG N+ GQLG G +
Sbjct: 1021 LNPMPPLVKNEKKAVSVACGWEHIAVISSDGE--------LFTWGNNSQGQLGHGLNVGK 1072
Query: 176 LR--PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P+ +ETF + SP + ++CG H+ + + +++G GQLGHG
Sbjct: 1073 YQSTPRRVETF-KSSP--IIMISCGGEHSVAVDQSFQ--------IYSWGSSRYGQLGHG 1121
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASL 289
+P+++++ ++++ G HT V+ +GD++++G + GLG N ++
Sbjct: 1122 VLTPQNLPKKIEDFTGGQKVLAIATGYAHTMVLKKSGDLFTFGWNDSGQLGLGNFKNRAV 1181
Query: 290 -TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R E + + G HG + +A G +H+++ D+G ++SWG G LG
Sbjct: 1182 PMRIETSEIV--------GIHGERI---TAIAAGHSHSIMCLDNG-DIYSWGANSKGQLG 1229
Query: 349 TG 350
G
Sbjct: 1230 HG 1231
>gi|348687440|gb|EGZ27254.1| hypothetical protein PHYSODRAFT_358246 [Phytophthora sojae]
Length = 545
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 136/309 (44%), Gaps = 42/309 (13%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S + PI +I + G ++ + + G ++ WG D G
Sbjct: 16 LGDTSDQHRPVPIDALAERRIVQIACGSGHTVVLTDEGEVYTWGR---GDDGRLGHGDNG 72
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
F P V + G + +V CGS H A+ +G+ Y+WG G+LG G+
Sbjct: 73 WKFVPRLVEELRGKNIRQVTCGSYHTAAVTVSGD--------LYTWGGGMYGKLGHGNET 124
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ET V +V CGS HT +L K +T+G ENG GHG
Sbjct: 125 GHSTPFLVETLK---GMQVRQVACGSRHTVVLLENKD--------VYTWGDKENGVSGHG 173
Query: 234 TTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
T+ +P V+EL + CG FHT+ +S G+V+++G K L N+ RN
Sbjct: 174 DTEGHQYLPCPVEELRGKNIVQISACG-FHTAALSEFGEVFTFGEGKFGRLGHNSE--RN 230
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ P+ G + + QVACG HT VT+ G ++++WG G G LG G
Sbjct: 231 Q------PVARFVEALAGKRVK---QVACGGFHTAAVTETG-EVYTWGGGEHGQLGHGDK 280
Query: 353 IDFFAPAIV 361
++ P V
Sbjct: 281 VNKTVPTRV 289
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/201 (34%), Positives = 105/201 (52%), Gaps = 28/201 (13%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
+ YSWG +GQLGLGD + RP I+ + + ++ CGS HT +LT
Sbjct: 1 MTVYSWGRGEDGQLGLGDTSDQHRPVPIDALAERR---IVQIACGSGHTVVLTD------ 51
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
E +T+G G++G+LGHG VP V+EL + + V CG +HT+ V+ +GD++
Sbjct: 52 --EGEVYTWGRGDDGRLGHGDNGWKFVPRLVEEL-RGKNIRQVTCGSYHTAAVTVSGDLY 108
Query: 274 SW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+W GM LG NE G + +P L+ K QVACG+ HTV++ +
Sbjct: 109 TWGGGMYGKLG-------HGNETGHS-TPFLVE-----TLKGMQVRQVACGSRHTVVLLE 155
Query: 332 DGYKLWSWGRGRSGVLGTGKT 352
+ +++WG +GV G G T
Sbjct: 156 N-KDVYTWGDKENGVSGHGDT 175
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 100/224 (44%), Gaps = 36/224 (16%)
Query: 64 SKTNHKAP--------IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSL 112
++T H P +++ V G ++ + ++ WG N TEG
Sbjct: 122 NETGHSTPFLVETLKGMQVRQVACGSRHTVVLLENKDVYTWGDKENGVSGHGDTEG---- 177
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P PV + G +V+++ H AL GE +++G G+LG
Sbjct: 178 -HQYLPCPVEELRGKNIVQISACGFHTAALSEFGE--------VFTFGEGKFGRLGHNSE 228
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
++ + +E + V +V CG FHTA +T +T+G GE+GQLGH
Sbjct: 229 RNQPVARFVEAL---AGKRVKQVACGGFHTAAVTETGE--------VYTWGGGEHGQLGH 277
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
G + VP +V+ L + + +V + CG HT ++ G+V++WG
Sbjct: 278 GDKVNKTVPTRVESLVEKL-VVQITCGWSHTVALTDTGEVYTWG 320
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 82/181 (45%), Gaps = 34/181 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDF----HG 126
I + A G + A+ G ++ +G EG F + +S PV F G
Sbjct: 192 NIVQISACGFHTAALSEFGEVFTFG---------EGKFGRLGHNSERNQPVARFVEALAG 242
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V +VACG H A+ GE Y+WG +GQLG GD+ ++ P +E+ +
Sbjct: 243 KRVKQVACGGFHTAAVTETGE--------VYTWGGGEHGQLGHGDKVNKTVPTRVESLVE 294
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V ++TCG HT LT D E +T+G G++G+LGH T +P+ V
Sbjct: 295 K---LVVQITCGWSHTVALT------DTGE--VYTWGNGDHGKLGHNDTTKVTLPKLVDV 343
Query: 247 L 247
L
Sbjct: 344 L 344
>gi|37695550|gb|AAR00320.1| HECT E3 ubiquitin ligase [Homo sapiens]
Length = 1024
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSTALSMSGNI--------YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y
Sbjct: 246 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSTALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V V+ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGY-----RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
>gi|444914429|ref|ZP_21234572.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444714661|gb|ELW55540.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 648
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/288 (30%), Positives = 129/288 (44%), Gaps = 43/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V AGG+ SLA+ + G LW WG+ D G S V + V G VV +A
Sbjct: 251 VMAVAAGGLYSLALRSDGTLWAWGSN---DHGQRGDGSTVYLSSSVRVRWLSG--VVAMA 305
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS H +A+ S D ++WGAN GQLG G R+ PK ++ ++ V
Sbjct: 306 AGSAHSLAVRS--------DGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSR-----VV 352
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V G H+ L + WT+G +GQL HG+T + VP V+EL +
Sbjct: 353 AVAAGDGHSIAL--------CADGTVWTWGYNHDGQLAHGSTNDSPVPLHVRELSG---V 401
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V+V G H+ V S G VW+WG + G + SL+ + P+ + G
Sbjct: 402 VAVAAGALHSLAVLSDGSVWAWGYNR-QGQLGDGSLS-----SSAEPVRVQG-------L 448
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V+ G H++ DG +W+WG G LG G T + P V
Sbjct: 449 SGVAAVSAGLNHSLARGTDG-GVWAWGGNSFGQLGEGTTSNALVPVRV 495
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/315 (28%), Positives = 133/315 (42%), Gaps = 63/315 (20%)
Query: 60 LEDDSKTNHKAP------IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D ++ +H P ++ +V AG S+A+ G +W WG + L ST
Sbjct: 331 LGDGTRKDHDTPKRVQGLSRVVAVAAGDGHSIALCADGTVWTWGYNHDGQLAHGSTN--- 387
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V + G VV VA G+ H +A++S G ++WG N GQLG G
Sbjct: 388 ---DSPVPLHVRELSG--VVAVAAGALHSLAVLSDGS--------VWAWGYNRQGQLGDG 434
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
S P ++ + V V+ G H+ R D W +G GQL
Sbjct: 435 SLSSSAEPVRVQGLS-----GVAAVSAGLNHS-----LARGTD---GGVWAWGGNSFGQL 481
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPN 286
G GTT +ALVP +V+ L + ++ G H+ +S G +W+WG + G G N
Sbjct: 482 GEGTTSNALVPVRVRGLSG---VETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTSN 538
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
+S+ P+ + G V G H++ V DG +W+WG G
Sbjct: 539 SSV----------PVRVQG-------LSGVAAVFAGLNHSLAVRTDG-SVWAWGINSFGQ 580
Query: 347 LGTGKTIDFFAPAIV 361
LG G T FAP V
Sbjct: 581 LGEGTTNTSFAPVRV 595
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 120/277 (43%), Gaps = 43/277 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V AG + SLA+ + G++W WG G SL SS P V G V V+
Sbjct: 401 VVAVAAGALHSLAVLSDGSVWAWG---YNRQGQLGDGSLSSSAEPVRVQGLSG--VAAVS 455
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +A +G D ++WG N+ GQLG G + L P + + V
Sbjct: 456 AGLNHSLA--------RGTDGGVWAWGGNSFGQLGEGTTSNALVPVRVRGLS-----GVE 502
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ G H+ R +D W +G GQLG GTT ++ VP +V+ L +
Sbjct: 503 TISAGFNHS-----LARASD---GGLWAWGGNYTGQLGDGTTSNSSVPVRVQGLSG---V 551
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+V GL H+ V + G VW+WG+ L + +P+ + G
Sbjct: 552 AAVFAGLNHSLAVRTDGSVWAWGINS------FGQLGEGTTNTSFAPVRVQG-------L 598
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
VA G+ H++ V DG +WSWG G LG G
Sbjct: 599 SGMETVAAGSLHSLSVGSDG-SMWSWGNNHHGQLGHG 634
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 135/311 (43%), Gaps = 52/311 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + +H P+++ +V AG SLA+ + G++W WG+ +S GG
Sbjct: 78 LGDGTSDSHSEPVRVPGLSGVVAVSAGDNHSLALRSDGSVWAWGDN---NSDQLGGAPGA 134
Query: 114 SSFT-PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD- 171
S++ P + D VV VA G H +A+ + D ++WG N GQLG G+
Sbjct: 135 QSYSVPWRLEDL--SEVVAVAAGGNHSLAVRA--------DGTVWAWGDNFAGQLGDGNI 184
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+R PK ++ + V + G H+ + + + W +G +GQLG
Sbjct: 185 LTTRWLPKQVQGLS-----GVVAASAGWAHSMVA--------LSDGSVWAWGNNTSGQLG 231
Query: 232 HGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
+G + +PEQV+ L +++V G ++ + S G +W+WG
Sbjct: 232 NGISVGYGALPEQVQGLRG---VMAVAAGGLYSLALRSDGTLWAWGSND----------- 277
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ GD + L S V +A G+AH++ V DG LW+WG G LG G
Sbjct: 278 HGQRGDGSTVYLSS--SVRVRWLSGVVAMAAGSAHSLAVRSDG-TLWAWGANYYGQLGDG 334
Query: 351 KTIDFFAPAIV 361
D P V
Sbjct: 335 TRKDHDTPKRV 345
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 88/321 (27%), Positives = 131/321 (40%), Gaps = 68/321 (21%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L D S +H P+++ +V AG SLA+ G +W WG+ L D +++
Sbjct: 28 LGDGSSDSHSEPVRVRGLSGVVAVSAGEGHSLALHRDGTVWAWGDNALGQLGDGTSD--- 84
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V G VV V+ G H +AL S G ++WG NN+ QLG
Sbjct: 85 ---SHSEPVRVPGLSG--VVAVSAGDNHSLALRSDGS--------VWAWGDNNSDQLGGA 131
Query: 171 -DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
+S P +E ++ V V G H+ L R + W +G GQ
Sbjct: 132 PGAQSYSVPWRLEDLSE-----VVAVAAGGNHS--LAVRA------DGTVWAWGDNFAGQ 178
Query: 230 LGHGTT-QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
LG G + +P+QV+ L +V+ G H+ V S G VW+WG
Sbjct: 179 LGDGNILTTRWLPKQVQGLSG---VVAASAGWAHSMVALSDGSVWAWGNN---------- 225
Query: 289 LTRNEAGDAIS------PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
T + G+ IS P + G + + VA G +++ + DG LW+WG
Sbjct: 226 -TSGQLGNGISVGYGALPEQVQG-------LRGVMAVAAGGLYSLALRSDG-TLWAWGSN 276
Query: 343 RSGVLGTGKTIDFFAPAIVLW 363
G G G T+ + V W
Sbjct: 277 DHGQRGDGSTVYLSSSVRVRW 297
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 88/336 (26%), Positives = 132/336 (39%), Gaps = 85/336 (25%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHG--- 126
++ +V AGG SLA+ G +W WG+ L D G L + + P V G
Sbjct: 148 EVVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGD-----GNILTTRWLPKQVQGLSGVVA 202
Query: 127 ------HTVVKVACGS------------------------EHVVAL-----VSAGETYK- 150
H++V ++ GS E V L V+AG Y
Sbjct: 203 ASAGWAHSMVALSDGSVWAWGNNTSGQLGNGISVGYGALPEQVQGLRGVMAVAAGGLYSL 262
Query: 151 --GEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
D ++WG+N++GQ G G S +R + + V + GS H+ L
Sbjct: 263 ALRSDGTLWAWGSNDHGQRGDGSTVYLSSSVRVRWLS--------GVVAMAAGSAHS--L 312
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
R + W +G GQLG GT + P++V+ L + +V+V G H+
Sbjct: 313 AVRS------DGTLWAWGANYYGQLGDGTRKDHDTPKRVQGLSR---VVAVAAGDGHSIA 363
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
+ + G VW+WG + L D+ P+ H + V VA GA H
Sbjct: 364 LCADGTVWTWGYNH------DGQLAHGSTNDSPVPL-------HVRELSGVVAVAAGALH 410
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V DG +W+WG R G LG G P V
Sbjct: 411 SLAVLSDG-SVWAWGYNRQGQLGDGSLSSSAEPVRV 445
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 93/224 (41%), Gaps = 41/224 (18%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G++H +AL D ++WG N GQLG G +S P + +
Sbjct: 1 MAAGTDHSLALR--------HDGTVWAWGGNALGQLGDGSSDSHSEPVRVRGLS-----G 47
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V+ G H+ L HR + W +G GQLG GT+ S P +V P
Sbjct: 48 VVAVSAGEGHS-LALHR-------DGTVWAWGDNALGQLGDGTSDSHSEPVRV---PGLS 96
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPH 309
+V+V G H+ + S G VW+WG LG P A P +
Sbjct: 97 GVVAVSAGDNHSLALRSDGSVWAWGDNNSDQLGGAPGAQSYS-------VPWRL------ 143
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ V VA G H++ V DG +W+WG +G LG G +
Sbjct: 144 -EDLSEVVAVAAGGNHSLAVRADG-TVWAWGDNFAGQLGDGNIL 185
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 117/285 (41%), Gaps = 49/285 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ AG SLA+ + G +W WG L D S++ S P V G VV V+
Sbjct: 1 MAAGTDHSLALRHDGTVWAWGGNALGQLGDGSSD------SHSEPVRVRGLSG--VVAVS 52
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL D ++WG N GQLG G +S P + + V
Sbjct: 53 AGEGHSLALH--------RDGTVWAWGDNALGQLGDGTSDSHSEPVRVPGLS-----GVV 99
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVKELPQYVY 252
V+ G H+ L + W +G + QLG QS VP ++++L +
Sbjct: 100 AVSAGDNHSLALRS--------DGSVWAWGDNNSDQLGGAPGAQSYSVPWRLEDLSE--- 148
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V+V G H+ V + G VW+WG L LT P + G
Sbjct: 149 VVAVAAGGNHSLAVRADGTVWAWGDNFAGQLGDGNILTTRWL-----PKQVQG------- 196
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
V + G AH+++ DG +W+WG SG LG G ++ + A
Sbjct: 197 LSGVVAASAGWAHSMVALSDG-SVWAWGNNTSGQLGNGISVGYGA 240
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 75/183 (40%), Gaps = 38/183 (20%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L + + +N P+++ ++ AG SLA + G LW WG L D +T
Sbjct: 481 LGEGTTSNALVPVRVRGLSGVETISAGFNHSLARASDGGLWAWGGNYTGQLGDGTTS--- 537
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+S P V G V V G H +A+ + G ++WG N+ GQLG G
Sbjct: 538 ---NSSVPVRVQGLSG--VAAVFAGLNHSLAVRTDGS--------VWAWGINSFGQLGEG 584
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ P ++ + + V GS H+ + + W++G +GQL
Sbjct: 585 TTNTSFAPVRVQGLS-----GMETVAAGSLHSLSVGS--------DGSMWSWGNNHHGQL 631
Query: 231 GHG 233
GHG
Sbjct: 632 GHG 634
>gi|270001314|gb|EEZ97761.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 3894
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ ++ WG D G + ++ TP + G+ ++
Sbjct: 3118 IKKIAVNSGGKHCLALSADNDVYSWGE---GDDGKLGHGNRLACETPKLIEALQGYEIID 3174
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H A+ S G+ Y+WG G+LG GD E +L+PK+IE +
Sbjct: 3175 IACGGAHSAAITSTGQ--------LYTWGKGRYGRLGHGDSEDQLKPKLIEEL---VGYK 3223
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L N W++G G+ G+LG G + VP++++ L +
Sbjct: 3224 VIDVACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKVPKKIESLAG-L 3276
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 3277 GVIKVECGSQFSVALTRSGSVYTWG--KGDYHRLGHGTGEHVRRPKKVAAL--------- 3325
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D+G ++++WG G LG T P +V
Sbjct: 3326 -QGKKI---ISIATGSLHCVACSDEG-EVFTWGDNDEGQLGDDTTNAIQRPRLV 3374
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG ++A+ G ++ WG + G + ++ P + +
Sbjct: 2142 IKKVAVHSGGKHAMALTLDGKVFSWGE---GEDGKLGHGNRLNLDKPKMIEALRSKKIRD 2198
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+I++
Sbjct: 2199 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHR--- 2247
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTF--GLGENGQLGHGTTQSALVPEQVKELPQ 249
+ +V CGS L L W F G G+ G+LG G ++ +P ++ L
Sbjct: 2248 IVQVACGSRDAQTLA--------LTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERL-N 2298
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V ++CG + ++ G+VW+WG KG L P +I
Sbjct: 2299 ALEVVQIECGAQFSLALTKTGEVWTWG--KG----DYFRLGHGSDQHVRKPTVI-----E 2347
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + + VA GA H + VTD G ++++WG G G G TI PA+V
Sbjct: 2348 SLKDKKVIHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTIVNRKPALV 2398
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 135/304 (44%), Gaps = 60/304 (19%)
Query: 71 PIKICSVKAGGMMSLAI-DNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHG 126
PI I AGG SL I + G L+ G T G L S P P+
Sbjct: 2090 PIHI----AGGSKSLFIVSHEGKLYACG------EGTNGRLGLGHSNNVPYPRPIPFLSQ 2139
Query: 127 HTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
+ + KVA G +H +AL G+ + SWG +G+LG G+R + +PK+IE
Sbjct: 2140 YVIKKVAVHSGGKHAMALTLDGKVF--------SWGEGEDGKLGHGNRLNLDKPKMIEAL 2191
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ ++ CGS H+A +T +T+GLGE G+LGHG + L P+ +
Sbjct: 2192 RSKK---IRDIACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNITQLKPKLI 2240
Query: 245 KELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRN-EAGDA 297
K L + +V V CG T ++ G V+SWG + G G ++ N E +A
Sbjct: 2241 KSLVGH-RIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNA 2299
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+ + VQ+ CGA ++ +T G ++W+WG+G LG G
Sbjct: 2300 L----------------EVVQIECGAQFSLALTKTG-EVWTWGKGDYFRLGHGSDQHVRK 2342
Query: 358 PAIV 361
P ++
Sbjct: 2343 PTVI 2346
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G S AI ++G L+ WG L + G ++ P + GH +V+V
Sbjct: 2195 KIRDIACGSSHSAAITSSGELYTWG---LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQV 2251
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E + +SWG + G+LG G E P IE N V
Sbjct: 2252 ACGSRDAQTLALTDEGW------VFSWGDGDFGKLGRGGSEGCNIPHNIERLN---ALEV 2302
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT WT+G G+ +LGHG+ Q P ++ L
Sbjct: 2303 VQIECGAQFSLALTKTGE--------VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK-K 2353
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++ V G H V+ G V++WG + G N + N P L+ HG +
Sbjct: 2354 VIHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTIVNR-----KPALV-----HGLE 2402
Query: 313 FQDPVQVACGAAHTV 327
+VACG++H++
Sbjct: 2403 DVHINRVACGSSHSI 2417
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 28/225 (12%)
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS 199
VA S GE + WG N+ QLG G + S+++ + F W ++ + GS
Sbjct: 2041 VAQDSTGEPSSTVGCRVFVWGLNDKDQLG-GMKGSKVKLPVQSDF-LSQLWPIH-IAGGS 2097
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDC 258
+++H E + G G NG+LG G + + P + L QYV V+V
Sbjct: 2098 KSLFIVSH--------EGKLYACGEGTNGRLGLGHSNNVPYPRPIPFLSQYVIKKVAVHS 2149
Query: 259 GLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
G H ++ G V+SWG E G LG +L + + +A+ K +D
Sbjct: 2150 GGKHAMALTLDGKVFSWGEGEDGKLGHGNRLNLDKPKMIEAL----------RSKKIRD- 2198
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ACG++H+ +T G +L++WG G G LG G I P ++
Sbjct: 2199 --IACGSSHSAAITSSG-ELYTWGLGEYGRLGHGDNITQLKPKLI 2240
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V+KV CGS+
Sbjct: 3231 SGDAQTLCITDDDNVWSWGD---GDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQF 3287
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y +WG + +LG G E RPK + + + G
Sbjct: 3288 SVALTRSGSVY--------TWGKGDYHRLGHGTGEHVRRPKKVAALQGKK---IISIATG 3336
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + E +T+G + GQLG TT + P V L Q + +V C
Sbjct: 3337 SLHCVACSD--------EGEVFTWGDNDEGQLGDDTTNAIQRPRLVSAL-QGKKITNVAC 3387
Query: 259 GLFHT 263
G HT
Sbjct: 3388 GSAHT 3392
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 100 PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK---GEDLVC 156
PLP + + +S W+ H + K + ++ L E + G
Sbjct: 2974 PLPANFCQEVRKKLSDTNADGCWEHESHDIFKKEHDEQLLIWLNRRPEDWTLSWGGSGTI 3033
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G ++++ P E + P + G T
Sbjct: 3034 YGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQL----VGGEQTLFAV-------TA 3081
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ + G G G+LG G T S LVP ++ + Q+V++ ++V+ G H +S+ DV+
Sbjct: 3082 DGKVYATGYGAGGRLGIGGTDSVLVPTLLESI-QHVFIKKIAVNSGGKHCLALSADNDVY 3140
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWG + L +P LI + + + +ACG AH+ +T G
Sbjct: 3141 SWGEGD------DGKLGHGNRLACETPKLIEALQGY-----EIIDIACGGAHSAAITSTG 3189
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG+GR G LG G + D P ++
Sbjct: 3190 -QLYTWGKGRYGRLGHGDSEDQLKPKLI 3216
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ ++ G SLA+ G +W WG D G S P+ + V+
Sbjct: 2300 LEVVQIECGAQFSLALTKTGEVWTWGK---GDYFRLGHGSDQHVRKPTVIESLKDKKVIH 2356
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ G+ Y+WG N++GQ G G +P ++
Sbjct: 2357 VAVGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTIVNRKPALVHGLED---VH 2405
Query: 192 VYEVTCGSFHT 202
+ V CGS H+
Sbjct: 2406 INRVACGSSHS 2416
>gi|427782019|gb|JAA56461.1| Putative hect e3 ubiquitin ligase hect e3 ubiquitin ligase
[Rhipicephalus pulchellus]
Length = 1480
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK V +GG LA+ G ++ WG D G + S P + G VV
Sbjct: 668 IKKVVVNSGGKHCLALSAEGEVYSWGEG---DDGKLGHGNKSSCERPRVIESLRGKEVVD 724
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG H + ++GE Y+WG G+LG GD + +LRPK +E S W
Sbjct: 725 VACGGAHSACITASGE--------LYTWGKGRYGRLGHGDSDDQLRPKKVEAL---SGWR 773
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V CGS L + W++G G+ G+LG G + VP +V +L Q +
Sbjct: 774 VRCVACGSGDAQTLCVTD------DDCVWSWGDGDYGKLGRGGSDGCKVPLRV-DLLQGM 826
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++++G V++WG KG LG + + R + A+
Sbjct: 827 GVIRVECGSQFSVALTASGSVYTWG--KGDYHRLGHGTDDHVRRPKRVAAL--------- 875
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V TD G ++++WG G LG G P +V
Sbjct: 876 -QGKKV---ICIAVGSLHCVACTDTG-EVYTWGDNDEGQLGDGTVNAIHKPRLV 924
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 71/293 (24%), Positives = 114/293 (38%), Gaps = 76/293 (25%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK-------------GEDL 154
GG P P ++V G + + A+ + G+ Y + +
Sbjct: 595 GGVEGAKVKLPMPCEALSALRPIQVVGGEQTLFAVTADGKVYATGYGAGGRLGIGGTDSV 654
Query: 155 VC---------------------------------YSWGANNNGQLGLGDRESRLRPKII 181
C YSWG ++G+LG G++ S RP++I
Sbjct: 655 SCPTLLESLQHVFIKKVVVNSGGKHCLALSAEGEVYSWGEGDDGKLGHGNKSSCERPRVI 714
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
E+ V +V CG H+A +T +T+G G G+LGHG + L P
Sbjct: 715 ESLRGKE---VVDVACGGAHSACIT--------ASGELYTWGKGRYGRLGHGDSDDQLRP 763
Query: 242 EQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
++V+ L + V V+ G T V+ VWSWG + G L R + P
Sbjct: 764 KKVEALSGWRVRCVACGSGDAQTLCVTDDDCVWSWG-DGDYG-----KLGRGGSDGCKVP 817
Query: 301 I---LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ L+ G G ++V CG+ +V +T G +++WG+G LG G
Sbjct: 818 LRVDLLQGMG--------VIRVECGSQFSVALTASG-SVYTWGKGDYHRLGHG 861
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 77/192 (40%), Gaps = 23/192 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ + +G +L + + +W WG+ D G P V G V++
Sbjct: 774 VRCVACGSGDAQTLCVTDDDCVWSWGDG---DYGKLGRGGSDGCKVPLRVDLLQGMGVIR 830
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V CGS+ VAL ++G Y +WG + +LG G + RPK +
Sbjct: 831 VECGSQFSVALTASGSVY--------TWGKGDYHRLGHGTDDHVRRPKRVAALQGKK--- 879
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + GS H T D E +T+G + GQLG GT + P V L Q
Sbjct: 880 VICIAVGSLHCVACT------DTGE--VYTWGDNDEGQLGDGTVNAIHKPRLVAAL-QGK 930
Query: 252 YLVSVDCGLFHT 263
+ V CG HT
Sbjct: 931 KINRVSCGSAHT 942
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG N+ GQLG + P E + P V G T +
Sbjct: 586 WGHNHRGQLGGVEGAKVKLPMPCEALSALRPIQVV----GGEQTLFAV-------TADGK 634
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG 276
+ G G G+LG G T S P ++ L Q+V++ V V+ G H +S+ G+V+SWG
Sbjct: 635 VYATGYGAGGRLGIGGTDSVSCPTLLESL-QHVFIKKVVVNSGGKHCLALSAEGEVYSWG 693
Query: 277 M--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
+ LG +S R +++ + ++ V VACG AH+ +T G
Sbjct: 694 EGDDGKLGHGNKSSCERPRVIESL-------------RGKEVVDVACGGAHSACITASG- 739
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG+GR G LG G + D P V
Sbjct: 740 ELYTWGKGRYGRLGHGDSDDQLRPKKV 766
>gi|391339113|ref|XP_003743897.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Metaseiulus occidentalis]
Length = 4496
Score = 100 bits (250), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + +S P V +
Sbjct: 2739 IKKVAVHSGGRHALALTIDGRVFSWGE---GEDGKLGHGNKISYDRPKLVESLKCKRIRD 2795
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H A+ S+GE Y+WG+ G+LG GD +L+PK + + +
Sbjct: 2796 VACGSSHSAAVTSSGE--------LYTWGSGEYGRLGHGDNVPQLKPKQVRALSHER--- 2844
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L +R +++G G+ G+LG G + + +P+ V+ L
Sbjct: 2845 VVQVACGSRDAQTLALTER------HWVYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQ- 2897
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + +S G VW+WG KG LG ++ + + + ++
Sbjct: 2898 QVIQVECGAQFSLALSKNGKVWTWG--KGDYFRLGHGSDSHVRWPQVVEELAD------- 2948
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ +QV+ GA H + VTD G ++++WG G G G T PAIV
Sbjct: 2949 ------KNVIQVSVGALHCIAVTDRG-EVYAWGDNDHGQQGNGNTTVNRKPAIV 2995
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 129/286 (45%), Gaps = 32/286 (11%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
+V +GG LA+ ++G ++ WG D G S P + VV VACG
Sbjct: 3710 AVNSGGKHCLALTSSGDVFSWGE---GDDGKLGHGSKALCERPKLIESLRDKHVVSVACG 3766
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + ++GE Y+WG G+LG GD E +L+PK +E + V +V
Sbjct: 3767 GAHSACITASGE--------LYTWGKGRYGRLGHGDSEDQLKPKKVEELAGHN---VLDV 3815
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CGS L + + + W++G G+ G+LG G + P+++ L Q ++
Sbjct: 3816 ACGSGDAQTLCVSR------DGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSL-QNAGVIK 3868
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V+CG + +++AG V++WG KG L P + G G +
Sbjct: 3869 VECGSQFSVALTAAGVVYTWG--KG----DYHRLGHGSEDHVRRPQAVQG-ALQGKRV-- 3919
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+QVA G+ H V TD G ++++WG G LG G T P +V
Sbjct: 3920 -IQVAVGSLHCVACTDSG-EVFTWGDNDEGQLGDGSTNAIQRPKLV 3963
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/261 (29%), Positives = 119/261 (45%), Gaps = 50/261 (19%)
Query: 118 PSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P+ D + + KVA G H +AL G + SWG +G+LG G++ S
Sbjct: 2728 PKPLTDLSPYFIKKVAVHSGGRHALALTIDGRVF--------SWGEGEDGKLGHGNKISY 2779
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
RPK++E+ + +V CGS H+A +T +T+G GE G+LGHG
Sbjct: 2780 DRPKLVESLKCKR---IRDVACGSSHSAAVTSSGE--------LYTWGSGEYGRLGHGDN 2828
Query: 236 QSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGM----EKGLGLCPNASL 289
L P+QV+ L + +V V CG T ++ V+SWG + G G +SL
Sbjct: 2829 VPQLKPKQVRAL-SHERVVQVACGSRDAQTLALTERHWVYSWGDGDFGKLGKGGSDGSSL 2887
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+N Q +QV CGA ++ ++ +G K+W+WG+G LG
Sbjct: 2888 PQN---------------VETLNSQQVIQVECGAQFSLALSKNG-KVWTWGKGDYFRLGH 2931
Query: 350 GKTIDFFAPAIVLWPPLTEEF 370
G + + V WP + EE
Sbjct: 2932 G------SDSHVRWPQVVEEL 2946
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/262 (28%), Positives = 112/262 (42%), Gaps = 36/262 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I V G S A+ ++G L+ WG+ + G V P V VV+V
Sbjct: 2792 RIRDVACGSSHSAAVTSSGELYTWGS---GEYGRLGHGDNVPQLKPKQVRALSHERVVQV 2848
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L + YSWG + G+LG G + P+ +ET N V
Sbjct: 2849 ACGSRDAQTLALTERHW------VYSWGDGDFGKLGKGGSDGSSLPQNVETLNSQQ---V 2899
Query: 193 YEVTCGS-FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+V CG+ F AL + K WT+G G+ +LGHG+ P+ V+EL
Sbjct: 2900 IQVECGAQFSLALSKNGK---------VWTWGKGDYFRLGHGSDSHVRWPQVVEELADK- 2949
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ V G H V+ G+V++WG + G N + T N P ++ G
Sbjct: 2950 NVIQVSVGALHCIAVTDRGEVYAWG-DNDHGQQGNGNTTVNR-----KPAIVRG------ 2997
Query: 312 KFQDPVQVACGAAHTVLVTDDG 333
+ VACG++H+V + G
Sbjct: 2998 -LEAITNVACGSSHSVAWSSTG 3018
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 109/256 (42%), Gaps = 35/256 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV GG S I +G L+ WG G P V + GH V+ VA
Sbjct: 3760 VVSVACGGAHSACITASGELYTWGK---GRYGRLGHGDSEDQLKPKKVEELAGHNVLDVA 3816
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS L + D + +SWG + G+LG G + P+ I++ V
Sbjct: 3817 CGSGDAQTLCVS------RDGLVWSWGDGDYGKLGRGGSDGCKFPQKIDSLQNA---GVI 3867
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V CGS + LT + +T+G G+ +LGHG+ P+ V+ Q +
Sbjct: 3868 KVECGSQFSVALT--------AAGVVYTWGKGDYHRLGHGSEDHVRRPQAVQGALQGKRV 3919
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V G H + +G+V++WG E LG ++ R P L++ G
Sbjct: 3920 IQVAVGSLHCVACTDSGEVFTWGDNDEGQLGDGSTNAIQR--------PKLVA--SLKGK 3969
Query: 312 KFQDPVQVACGAAHTV 327
K +VACG+AHTV
Sbjct: 3970 KMN---RVACGSAHTV 3982
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 107/223 (47%), Gaps = 32/223 (14%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V++ G + + AL S G+ Y + G G+LG+G ES P +IET Q
Sbjct: 3655 VQIVGGEQTLFALTSDGKVY--------ATGYGAGGRLGIGGTESVSTPTLIETL-QHVI 3705
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V G H LT +++G G++G+LGHG+ P+ ++ L +
Sbjct: 3706 VTQVAVNSGGKHCLALTS--------SGDVFSWGEGDDGKLGHGSKALCERPKLIESL-R 3756
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++VSV CG H++ ++++G++++WG + L ++ D + P + H
Sbjct: 3757 DKHVVSVACGGAHSACITASGELYTWGKGR------YGRLGHGDSEDQLKPKKVEELAGH 3810
Query: 310 GPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + VACG+ A T+ V+ DG +WSWG G G LG G
Sbjct: 3811 -----NVLDVACGSGDAQTLCVSRDGL-VWSWGDGDYGKLGRG 3847
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 96/221 (43%), Gaps = 50/221 (22%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
V + WG N+ GQLG G ++++ I C + TAL RP +
Sbjct: 3620 VIHGWGHNHRGQLG-GVEGAKVKTATI---------------CDAL-TAL-----RPVQI 3657
Query: 215 LESMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL-VSVDCGLFH 262
+ F L +G++ G G T+S P ++ L + V+V+ G H
Sbjct: 3658 VGGEQTLFALTSDGKVYATGYGAGGRLGIGGTESVSTPTLIETLQHVIVTQVAVNSGGKH 3717
Query: 263 TSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
++S+GDV+SWG + LG A R P LI + + V VA
Sbjct: 3718 CLALTSSGDVFSWGEGDDGKLGHGSKALCER--------PKLI-----ESLRDKHVVSVA 3764
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG AH+ +T G +L++WG+GR G LG G + D P V
Sbjct: 3765 CGGAHSACITASG-ELYTWGKGRYGRLGHGDSEDQLKPKKV 3804
>gi|428166922|gb|EKX35889.1| hypothetical protein GUITHDRAFT_40307, partial [Guillardia theta
CCMP2712]
Length = 277
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/240 (32%), Positives = 118/240 (49%), Gaps = 39/240 (16%)
Query: 117 TPSPVWDFHGHTVVKVACGS----EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+P P+ G VV VACG +H A+ G+ Y +WG+ +GQLG GD
Sbjct: 21 SPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVY--------TWGSGKSGQLGHGDS 72
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
++ + P++I Q +P + EV CGS HT +++ + + +G G GQLG
Sbjct: 73 QNLVLPRLIVGL-QSNP--IVEVACGSAHTVVVSK--------AGLVFAWGWGHFGQLGV 121
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLT 290
G+T ++ P QV L V + V CG HT+VV+ +G V W WG+ LG +AS +
Sbjct: 122 GSTHNSNDPVQVTSLDG-VKVCKVACGSAHTAVVTESGHVYTWGWGVNGQLGHGDDASQS 180
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R + I +S +ACG AHTV+V++ ++SWG G LG G
Sbjct: 181 RPMYVKKLHGIYVS-------------TLACGLAHTVVVSEVDRAVFSWGWDEYGQLGHG 227
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 87/303 (28%), Positives = 139/303 (45%), Gaps = 42/303 (13%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGG----MMSLAIDNAGALWMWGNCPLPDSSTE 107
L +G D++ + + SV GG S A+ G ++ WG+ S
Sbjct: 11 LGLGTTDAVGSPCPIIALQGLLVVSVACGGGSEEQHSAAVTEQGQVYTWGS---GKSGQL 67
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G + P + + +V+VACGS H V + AG + ++WG + GQL
Sbjct: 68 GHGDSQNLVLPRLIVGLQSNPIVEVACGSAHTVVVSKAG--------LVFAWGWGHFGQL 119
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G+G + P + + + V +V CGS HTA++T +T+G G N
Sbjct: 120 GVGSTHNSNDPVQVTSLDGVK---VCKVACGSAHTAVVTESGH--------VYTWGWGVN 168
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD-VWSWGMEKGLGLCPN 286
GQLGHG S P VK+L +Y+ ++ CGL HT VVS V+SWG ++
Sbjct: 169 GQLGHGDDASQSRPMYVKKL-HGIYVSTLACGLAHTVVVSEVDRAVFSWGWDE------- 220
Query: 287 ASLTRNEAGDAISPILISGNGPHGPK-FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
+ G I GN P+ +D Q+ACG+++T+ ++ G ++++G G+ G
Sbjct: 221 ----YGQLGHGGWDIF-GGNKNRSPRPIKDLQQIACGSSYTLALSSRG-DVYAFGWGKDG 274
Query: 346 VLG 348
LG
Sbjct: 275 QLG 277
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/211 (33%), Positives = 103/211 (48%), Gaps = 32/211 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF----HTALLTHRKRPN 212
+SWG NN+G LGLG ++ P I V V CG H+A +T + +
Sbjct: 1 FSWGFNNDGALGLGTTDAVGSPCPIIALQ---GLLVVSVACGGGSEEQHSAAVTEQGQ-- 55
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+T+G G++GQLGHG +Q+ ++P + L Q +V V CG HT VVS AG V
Sbjct: 56 ------VYTWGSGKSGQLGHGDSQNLVLPRLIVGL-QSNPIVEVACGSAHTVVVSKAGLV 108
Query: 273 --WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
W WG LG+ + + + D + + G +VACG+AHT +VT
Sbjct: 109 FAWGWGHFGQLGVG-----STHNSNDPVQVTSLDG--------VKVCKVACGSAHTAVVT 155
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G+ +++WG G +G LG G P V
Sbjct: 156 ESGH-VYTWGWGVNGQLGHGDDASQSRPMYV 185
>gi|326668760|ref|XP_686789.5| PREDICTED: e3 ubiquitin-protein ligase HERC2, partial [Danio rerio]
Length = 3645
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 1856 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 1912
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE YSWG G+LG GD ++LRPK+++
Sbjct: 1913 IACGSSHSAAITSSGE--------LYSWGLGEYGRLGHGDNTTQLRPKLVKVLLGHR--- 1961
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E M +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 1962 VVQVACGSRDAQTLALTD------EGMVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 2014
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + P ++ G G
Sbjct: 2015 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGTDVHVRK------PQMV--EGLRGK 2066
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VT+ G ++++WG G G G T P +V
Sbjct: 2067 KI---VHVAVGALHCLAVTETG-QVFAWGDNDHGQQGNGTTTVNRKPTLV 2112
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ +V +GG LA+ + G L+ WG + G + P + G VV
Sbjct: 2850 IRKVAVNSGGKHCLALSSEGELYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGVEVVD 2906
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + ++GE Y+WG G+LG GD E +L+PK++E
Sbjct: 2907 IAAGGAHSACITASGE--------LYTWGKGRYGRLGHGDSEDQLKPKLVEALQGHR--- 2955
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + M W++G G+ G+LG G + VP ++ L
Sbjct: 2956 VIDVACGSGDAQTLCLTD--------DDMVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 3006
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 3007 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 3054
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 3055 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 3106
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 1885 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 1926
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH VV+VACGS L E
Sbjct: 1927 GELYSWG---LGEYGRLGHGDNTTQLRPKLVKVLLGHRVVQVACGSRDAQTLALTDEG-- 1981
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 1982 ----MVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2031
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 2032 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQMVEGL-RGKKIVHVAVGALHCLAVTETG 2085
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 2086 QVFAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 2131
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 134/294 (45%), Gaps = 42/294 (14%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D KT A + + G+ S A +++WG L D GG PS
Sbjct: 1742 EEDEKT---ATGSMSRKRLSGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 1794
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
VV+VA GS+ + A+ + G+ Y+ G NG+LGLG L
Sbjct: 1795 SETLSALNVVQVAGGSKSLFAVTAEGKV--------YACGEATNGRLGLG-----LSSGT 1841
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
I Q S + Y V + H+ R ++ +++G G++G+LGH + +
Sbjct: 1842 IPIPRQISALSNYVVKKVAVHSG---GRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDK 1898
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAI 298
P ++ L + + + CG H++ ++S+G+++SWG+ E G LG N + R
Sbjct: 1899 PRLIEAL-KTKRIRDIACGSSHSAAITSSGELYSWGLGEYGRLGHGDNTTQLR------- 1950
Query: 299 SPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P L+ H VQVACG+ A T+ +TD+G ++SWG G G LG G
Sbjct: 1951 -PKLVKVLLGH-----RVVQVACGSRDAQTLALTDEGM-VFSWGDGDFGKLGRG 1997
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 2756 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPTEALATLRPVQLIGGEQTLFAVT 2812
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 2813 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIRKV-AVNSGGKHCL 2863
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + V +V + G H+
Sbjct: 2864 ALSS--------EGELYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGVEVVDIAAGGAHS 2914
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ ++++G++++WG + L ++ D + P L+ H + VACG+
Sbjct: 2915 ACITASGELYTWGKGR------YGRLGHGDSEDQLKPKLVEALQGH-----RVIDVACGS 2963
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 2964 GDAQTLCLTDDDM-VWSWGDGDYGKLGRG 2991
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 2997 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 3053
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 3054 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 3105
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ + V CGS HT
Sbjct: 3106 VAALQGKK---INRVACGSAHT 3124
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 2016 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQMVEGLRGKKIVHVA 2072
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ + +WG N++GQ G G +P +++ +
Sbjct: 2073 VGALHCLAVTETGQVF--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2121
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 2122 RVACGSSHSVAWT 2134
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 2963 SGDAQTLCLTDDDMVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 3019
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 3020 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 3068
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 3069 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 3119
Query: 259 GLFHT 263
G HT
Sbjct: 3120 GSAHT 3124
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ G ++ WG+ D +G + + P+ V G + +V
Sbjct: 2067 KIVHVAVGALHCLAVTETGQVFAWGDN---DHGQQGNGTTTVNRKPTLVQGLEGQKITRV 2123
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 2124 ACGSSHSVA 2132
>gi|452823021|gb|EME30035.1| E3 ubiquitin-protein ligase HERC2 [Galdieria sulphuraria]
Length = 432
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 125/289 (43%), Gaps = 45/289 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
I V GG AID G L+ WG S+ GG V F P + D V+ V
Sbjct: 145 IVKVSIGGNHMAAIDKDGHLYCWGRAA---SAGSGGTEHV--FIPRLIKGDLEKEKVISV 199
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG H A+ GE + +WG G+LG G++ S+ +PK +++ + V
Sbjct: 200 SCGRSHTAAVTEKGEVW--------TWGNGYEGELGHGEKNSQYQPKKVQSLTEK----V 247
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CG T + ES ++ G + GQLG G + + + L
Sbjct: 248 VDVACGRDFTIFVC---------ESGLYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGL 298
Query: 253 --LVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+V++ G +H + G V++WG+ E LG A + + D + I
Sbjct: 299 SDVVAISAGDYHVCALGRDGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNFEI----- 353
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
VQVACG HT VT DG L++WGRGR G LG G ++ A
Sbjct: 354 --------VQVACGGGHTAAVTKDGV-LYTWGRGRDGQLGRGGELESIA 393
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 87/204 (42%), Gaps = 22/204 (10%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ SV G + A+ G +W WGN G S + P V VV V
Sbjct: 195 KVISVSCGRSHTAAVTEKGEVWTWGN---GYEGELGHGEKNSQYQPKKVQSLT-EKVVDV 250
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG + + + +G YS GA++ GQLGLG + + + V
Sbjct: 251 ACGRDFTIFVCESG---------LYSCGADDYGQLGLGRSHGERFVQTPRSLSGTGLSDV 301
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ G +H L + + +T+GLG GQLGHG + + V L +
Sbjct: 302 VAISAGDYHVCALGR--------DGLVYTWGLGREGQLGHGEKADCSLAKPVDNLRNF-E 352
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG 276
+V V CG HT+ V+ G +++WG
Sbjct: 353 IVQVACGGGHTAAVTKDGVLYTWG 376
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/235 (25%), Positives = 93/235 (39%), Gaps = 35/235 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P PV G +V VA G A+ G+ Y +WG+ G+LG D +
Sbjct: 82 PFPVEALSGKRIVYVAAGDSCTAAISLDGDVY--------TWGSGEYGKLGHNDDSNENL 133
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+++E + + +V+ G H A + CW G G G T+
Sbjct: 134 PRLVEALKGKN---IVKVSIGGNHMAAIDKDGHL------YCW----GRAASAGSGGTEH 180
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
+P +K + ++SV CG HT+ V+ G+VW+WG L E
Sbjct: 181 VFIPRLIKGDLEKEKVISVSCGRSHTAAVTEKGEVWTWGNGY------EGELGHGEKNSQ 234
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P + + V VACG T+ V + G L+S G G LG G++
Sbjct: 235 YQPKKVQ------SLTEKVVDVACGRDFTIFVCESG--LYSCGADDYGQLGLGRS 281
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 27/212 (12%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
++G N GQLG G RP +E S + V G TA ++ L+
Sbjct: 62 TFGLNLIGQLGQGHERPADRPFPVEAL---SGKRIVYVAAGDSCTAAIS--------LDG 110
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+T+G GE G+LGH + +P V+ L + +V V G H + + G ++ WG
Sbjct: 111 DVYTWGSGEYGKLGHNDDSNENLPRLVEAL-KGKNIVKVSIGGNHMAAIDKDGHLYCWGR 169
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
AS P LI G+ + + + V+CG +HT VT+ G ++W
Sbjct: 170 A--------ASAGSGGTEHVFIPRLIKGD----LEKEKVISVSCGRSHTAAVTEKG-EVW 216
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 369
+WG G G LG G+ + P V LTE+
Sbjct: 217 TWGNGYEGELGHGEKNSQYQPKKV--QSLTEK 246
>gi|299471207|emb|CBN79063.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 513
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/196 (33%), Positives = 105/196 (53%), Gaps = 26/196 (13%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ YSWG +GQLGLGD + RP +++ V +V CGS HT +L+
Sbjct: 8 LVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSK---GVVQVACGSGHTVVLSE------- 57
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ +T+G G++G+LGHG VP V+ L + +V CG +HT+ V+ G++++
Sbjct: 58 -DGAVYTWGRGDDGRLGHGDNGWKYVPRIVEAL-EGQRIVQATCGSYHTAAVTDKGELYT 115
Query: 275 W--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W GM LG NE+G +P ++ G + Q+ACG+ HTV++TD
Sbjct: 116 WGGGMYGKLG-------HGNESGHP-TPCMVKHLRDEGARV---TQIACGSRHTVVLTDL 164
Query: 333 GYKLWSWGRGRSGVLG 348
G K+++WG +GV+G
Sbjct: 165 G-KVYTWGDKENGVVG 179
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 111/234 (47%), Gaps = 31/234 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H V L ED Y+WG ++G+LG GD + P+I+E
Sbjct: 42 VVQVACGSGHTVVL--------SEDGAVYTWGRGDDGRLGHGDNGWKYVPRIVEALEGQR 93
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL- 247
+ + TCGS+HTA +T + +T+G G G+LGHG P VK L
Sbjct: 94 ---IVQATCGSYHTAAVTDKGE--------LYTWGGGMYGKLGHGNESGHPTPCMVKHLR 142
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + + CG HT V++ G V++WG +K G+ + N G P ++
Sbjct: 143 DEGARVTQIACGSRHTVVLTDLGKVYTWG-DKENGVVGHT----NADGHQYLPRMLE--- 194
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + QVA HT +T G ++++WG G+ G LG G + P +V
Sbjct: 195 --SLQAKTVTQVAACGFHTAALTAAG-EIFTWGEGKFGRLGHGMERNQMVPRMV 245
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/316 (25%), Positives = 130/316 (41%), Gaps = 53/316 (16%)
Query: 32 DGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DGQLG +N P +++ + G + V G ++ +
Sbjct: 17 DGQLGLGDTNDQDRPVLVDALKSKG------------------VVQVACGSGHTVVLSED 58
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
GA++ WG D G + P V G +V+ CGS H A+ GE
Sbjct: 59 GAVYTWGR---GDDGRLGHGDNGWKYVPRIVEALEGQRIVQATCGSYHTAAVTDKGE--- 112
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
Y+WG G+LG G+ P +++ +D V ++ CGS HT +LT +
Sbjct: 113 -----LYTWGGGMYGKLGHGNESGHPTPCMVKHL-RDEGARVTQIACGSRHTVVLTDLGK 166
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G ENG +GH +P ++ L CG FHT+ +++A
Sbjct: 167 --------VYTWGDKENGVVGHTNADGHQYLPRMLESLQAKTVTQVAACG-FHTAALTAA 217
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G++++WG E G + + RN+ + L+ H VACG H+ +
Sbjct: 218 GEIFTWG-EGKFGRLGHG-MERNQMVPRMVEALMGKRVGH---------VACGGFHSAAI 266
Query: 330 TDDGYKLWSWGRGRSG 345
D G +L++WG G G
Sbjct: 267 LDSG-ELYTWGGGEHG 281
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/252 (24%), Positives = 105/252 (41%), Gaps = 52/252 (20%)
Query: 31 MDGQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
M G+LG S PC+++ GA ++ + G ++ + +
Sbjct: 120 MYGKLGHGNESGHPTPCMVKHLRDEGA----------------RVTQIACGSRHTVVLTD 163
Query: 90 AGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
G ++ WG N + ++ +G + P + TV +VA H AL +AG
Sbjct: 164 LGKVYTWGDKENGVVGHTNADG-----HQYLPRMLESLQAKTVTQVAACGFHTAALTAAG 218
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
E ++WG G+LG G +++ P+++E V V CG FH+A +
Sbjct: 219 E--------IFTWGEGKFGRLGHGMERNQMVPRMVEALMGKR---VGHVACGGFHSAAIL 267
Query: 207 HRKRPNDMLESMCW---------TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
D E W TFG G++G+LGHG + VP V L + +++V V
Sbjct: 268 ------DSGELYTWGGGEHGQVYTFGNGDHGKLGHGDVRKVSVPTLVAGLVK-MHVVKVA 320
Query: 258 CGLFHTSVVSSA 269
HT+ ++ A
Sbjct: 321 SYNEHTAALAGA 332
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 68/147 (46%), Gaps = 13/147 (8%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ + +++G GE+GQLG G T P V L +V V CG HT V+S G V++
Sbjct: 5 VAGLVYSWGRGEDGQLGLGDTNDQDRPVLVDALKSK-GVVQVACGSGHTVVLSEDGAVYT 63
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + L + G P ++ + Q VQ CG+ HT VTD G
Sbjct: 64 WGR------GDDGRLGHGDNGWKYVPRIVE-----ALEGQRIVQATCGSYHTAAVTDKG- 111
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG G G LG G P +V
Sbjct: 112 ELYTWGGGMYGKLGHGNESGHPTPCMV 138
>gi|189241718|ref|XP_968558.2| PREDICTED: similar to hect domain and RLD 2 [Tribolium castaneum]
Length = 4733
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ ++ WG D G + ++ TP + G+ ++
Sbjct: 3957 IKKIAVNSGGKHCLALSADNDVYSWGE---GDDGKLGHGNRLACETPKLIEALQGYEIID 4013
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H A+ S G+ Y+WG G+LG GD E +L+PK+IE +
Sbjct: 4014 IACGGAHSAAITSTGQ--------LYTWGKGRYGRLGHGDSEDQLKPKLIEEL---VGYK 4062
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L N W++G G+ G+LG G + VP++++ L +
Sbjct: 4063 VIDVACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKVPKKIESLAG-L 4115
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4116 GVIKVECGSQFSVALTRSGSVYTWG--KGDYHRLGHGTGEHVRRPKKVAAL--------- 4164
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D+G ++++WG G LG T P +V
Sbjct: 4165 -QGKKI---ISIATGSLHCVACSDEG-EVFTWGDNDEGQLGDDTTNAIQRPRLV 4213
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 132/292 (45%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG ++A+ G ++ WG + G + ++ P + +
Sbjct: 2981 IKKVAVHSGGKHAMALTLDGKVFSWGE---GEDGKLGHGNRLNLDKPKMIEALRSKKIRD 3037
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+I++
Sbjct: 3038 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNITQLKPKLIKSLVGHR--- 3086
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTF--GLGENGQLGHGTTQSALVPEQVKELPQ 249
+ +V CGS L L W F G G+ G+LG G ++ +P ++ L
Sbjct: 3087 IVQVACGSRDAQTLA--------LTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERL-N 3137
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V ++CG + ++ G+VW+WG KG L P +I
Sbjct: 3138 ALEVVQIECGAQFSLALTKTGEVWTWG--KG----DYFRLGHGSDQHVRKPTVI-----E 3186
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + + VA GA H + VTD G ++++WG G G G TI PA+V
Sbjct: 3187 SLKDKKVIHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTIVNRKPALV 3237
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 36/264 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V+ GG S AI GAL+ WG + G + TP+ + ++KVA
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGR---GNYGRLGHGTAEDCLTPTMISALSDEHIIKVA 625
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS H + + S G+ Y SWG + G+LG G + P++IE
Sbjct: 626 CGSFYAHTLCITSQGKVY--------SWGDGDYGKLGRGGSDGSKLPRLIEKLQN---VK 674
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CG+ + L+ + +T+G GE +LGH T ++ PE V E+ +
Sbjct: 675 IVQVYCGAQFSVALSE--------DGHVYTWGKGEGWKLGHPTEENVRFPEMV-EVLRDR 725
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V V G+ H ++ G+V+ WG + +C ++ L + P LI
Sbjct: 726 KVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQ------PRLI-----EAL 774
Query: 312 KFQDPVQVACGAAHTVLVTDDGYK 335
K Q V V CG A + TDD +
Sbjct: 775 KGQKVVGVCCGPAQSFAWTDDNER 798
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 40/250 (16%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P + G ++K+A E H +AL +D YSWG + G+LG GD ++
Sbjct: 504 PQEMTGLSGINMIKIAAHPEGKHYLALT--------KDYEVYSWGNGDGGRLGHGDTSTK 555
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P +I+ + +V CG ++A ++ N L +T+G G G+LGHGT
Sbjct: 556 EEPTLIQALKGKD---IIDVECGGTYSAAIS----ANGAL----YTWGRGNYGRLGHGTA 604
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLF--HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ L P + L +++ V CG F HT ++S G V+SWG + G L R
Sbjct: 605 EDCLTPTMISALSDE-HIIKVACGSFYAHTLCITSQGKVYSWG-DGDYG-----KLGRGG 657
Query: 294 AGDAISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ + P LI K Q+ VQV CGA +V +++DG+ +++WG+G LG
Sbjct: 658 SDGSKLPRLIE-------KLQNVKIVQVYCGAQFSVALSEDGH-VYTWGKGEGWKLGHPT 709
Query: 352 TIDFFAPAIV 361
+ P +V
Sbjct: 710 EENVRFPEMV 719
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/304 (28%), Positives = 135/304 (44%), Gaps = 60/304 (19%)
Query: 71 PIKICSVKAGGMMSLAI-DNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHG 126
PI I AGG SL I + G L+ G T G L S P P+
Sbjct: 2929 PIHI----AGGSKSLFIVSHEGKLYACG------EGTNGRLGLGHSNNVPYPRPIPFLSQ 2978
Query: 127 HTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
+ + KVA G +H +AL G+ + SWG +G+LG G+R + +PK+IE
Sbjct: 2979 YVIKKVAVHSGGKHAMALTLDGKVF--------SWGEGEDGKLGHGNRLNLDKPKMIEAL 3030
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ ++ CGS H+A +T +T+GLGE G+LGHG + L P+ +
Sbjct: 3031 RSKK---IRDIACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNITQLKPKLI 3079
Query: 245 KELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRN-EAGDA 297
K L + +V V CG T ++ G V+SWG + G G ++ N E +A
Sbjct: 3080 KSLVGH-RIVQVACGSRDAQTLALTDEGWVFSWGDGDFGKLGRGGSEGCNIPHNIERLNA 3138
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+ + VQ+ CGA ++ +T G ++W+WG+G LG G
Sbjct: 3139 L----------------EVVQIECGAQFSLALTKTG-EVWTWGKGDYFRLGHGSDQHVRK 3181
Query: 358 PAIV 361
P ++
Sbjct: 3182 PTVI 3185
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 109/255 (42%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G S AI ++G L+ WG L + G ++ P + GH +V+V
Sbjct: 3034 KIRDIACGSSHSAAITSSGELYTWG---LGEYGRLGHGDNITQLKPKLIKSLVGHRIVQV 3090
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E + +SWG + G+LG G E P IE N V
Sbjct: 3091 ACGSRDAQTLALTDEGW------VFSWGDGDFGKLGRGGSEGCNIPHNIERLN---ALEV 3141
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT WT+G G+ +LGHG+ Q P ++ L
Sbjct: 3142 VQIECGAQFSLALTKTGE--------VWTWGKGDYFRLGHGSDQHVRKPTVIESLKDK-K 3192
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
++ V G H V+ G V++WG + G N + N P L+ HG +
Sbjct: 3193 VIHVAVGALHCLAVTDTGQVYAWG-DNDHGQQGNGTTIVNR-----KPALV-----HGLE 3241
Query: 313 FQDPVQVACGAAHTV 327
+VACG++H++
Sbjct: 3242 DVHINRVACGSSHSI 3256
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V+KV CGS+
Sbjct: 4070 SGDAQTLCITDDDNVWSWGD---GDYGKLGRGGSDGCKVPKKIESLAGLGVIKVECGSQF 4126
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y +WG + +LG G E RPK + + + G
Sbjct: 4127 SVALTRSGSVY--------TWGKGDYHRLGHGTGEHVRRPKKVAALQGKK---IISIATG 4175
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + E +T+G + GQLG TT + P V L Q + +V C
Sbjct: 4176 SLHCVACSD--------EGEVFTWGDNDEGQLGDDTTNAIQRPRLVSAL-QGKKITNVAC 4226
Query: 259 GLFHT 263
G HT
Sbjct: 4227 GSAHT 4231
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 114/268 (42%), Gaps = 31/268 (11%)
Query: 100 PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK---GEDLVC 156
PLP + + +S W+ H + K + ++ L E + G
Sbjct: 3813 PLPANFCQEVRKKLSDTNADGCWEHESHDIFKKEHDEQLLIWLNRRPEDWTLSWGGSGTI 3872
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G ++++ P E + P + G T
Sbjct: 3873 YGWGHNHRGQLG-GIEGAKVKIPTPCEALSTLRPVQL----VGGEQTLFAV-------TA 3920
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ + G G G+LG G T S LVP ++ + Q+V++ ++V+ G H +S+ DV+
Sbjct: 3921 DGKVYATGYGAGGRLGIGGTDSVLVPTLLESI-QHVFIKKIAVNSGGKHCLALSADNDVY 3979
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWG + L +P LI + + + +ACG AH+ +T G
Sbjct: 3980 SWGEGD------DGKLGHGNRLACETPKLIEALQGY-----EIIDIACGGAHSAAITSTG 4028
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG+GR G LG G + D P ++
Sbjct: 4029 -QLYTWGKGRYGRLGHGDSEDQLKPKLI 4055
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 55/131 (41%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ ++ G SLA+ G +W WG D G S P+ + V+
Sbjct: 3139 LEVVQIECGAQFSLALTKTGEVWTWGK---GDYFRLGHGSDQHVRKPTVIESLKDKKVIH 3195
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ G+ Y+WG N++GQ G G +P ++
Sbjct: 3196 VAVGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTIVNRKPALVHGLED---VH 3244
Query: 192 VYEVTCGSFHT 202
+ V CGS H+
Sbjct: 3245 INRVACGSSHS 3255
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 63/167 (37%), Gaps = 33/167 (19%)
Query: 33 GQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS+ S +P +IE+ + KI V G S+A+ G
Sbjct: 651 GKLGRGGSDGSKLPRLIEKLQNV------------------KIVQVYCGAQFSVALSEDG 692
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG + G + + P V VV V+ G HV+AL GE
Sbjct: 693 HVYTWGK---GEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEV--- 746
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
Y WG N N Q+ +P++IE V V CG
Sbjct: 747 -----YGWGKNENKQICDSSELFVQQPRLIEALKGQK---VVGVCCG 785
>gi|428184654|gb|EKX53509.1| hypothetical protein GUITHDRAFT_64398, partial [Guillardia theta
CCMP2712]
Length = 279
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 33/248 (13%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P P+ V++VA G +H AL S+G+ Y SWG NG+LG G+ +
Sbjct: 21 PKPIKSLKEKGVIQVAVGPQHCSALCSSGQIY--------SWGIGLNGRLGHGNIQDSSA 72
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
PK++ + ++ ++ CG+ H+A LT + +++G G NG+LG+G
Sbjct: 73 PKMLASTKKNC--TAVQIACGAAHSAYLTQ--------DGKLYSWGRGLNGELGNGERHD 122
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
P V L V + V CG T + G ++SWG K + L + D
Sbjct: 123 QWTPNLVLRLRDLV-VSYVACGTNTTFACTGGGLLFSWGSGK------HGCLGLGDREDR 175
Query: 298 ISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ P L+ + +D + +VACG H + +T+DG KLW WGRG G G G T +
Sbjct: 176 LEPSLVR------LREEDRIIRVACGEHHCLALTEDG-KLWGWGRGTGGCHGLGHTSEVL 228
Query: 357 APAIVLWP 364
+P + P
Sbjct: 229 SPHKLPMP 236
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 93/206 (45%), Gaps = 27/206 (13%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
SWG N LG G + PK I++ + V +V G H + L
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIKSLKEK---GVIQVAVGPQHCSALCS--------SG 49
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+++G+G NG+LGHG Q + P+ + + V + CG H++ ++ G ++SWG
Sbjct: 50 QIYSWGIGLNGRLGHGNIQDSSAPKMLASTKKNCTAVQIACGAAHSAYLTQDGKLYSWG- 108
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYK 335
+GL N L E D +P L+ + +D V VACG T T G
Sbjct: 109 -RGL----NGELGNGERHDQWTPNLVL-------RLRDLVVSYVACGTNTTFACTGGGL- 155
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
L+SWG G+ G LG G D P++V
Sbjct: 156 LFSWGSGKHGCLGLGDREDRLEPSLV 181
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 23/205 (11%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ G S + G L+ WG + G +TP+ V V VACG+
Sbjct: 88 IACGAAHSAYLTQDGKLYSWGR---GLNGELGNGERHDQWTPNLVLRLRDLVVSYVACGT 144
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
A G + +SWG+ +G LGLGDRE RL P ++ +D + V
Sbjct: 145 NTTFACTGGG--------LLFSWGSGKHGCLGLGDREDRLEPSLVRLREEDR---IIRVA 193
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
CG H LT + W +G G G G G T L P ++ +P+ +VS+
Sbjct: 194 CGEHHCLALTE--------DGKLWGWGRGTGGCHGLGHTSEVLSPHKL-PMPEDRTIVSM 244
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGL 281
CG +H++ ++ GD++ +G +G
Sbjct: 245 SCGRWHSAYLTIRGDIFCFGSGRGF 269
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 79/142 (55%), Gaps = 12/142 (8%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
++G G N LGHG+ + P+ +K L + ++ V G H S + S+G ++SWG
Sbjct: 1 SWGTGFNLCLGHGSHANEKYPKPIKSLKEKG-VIQVAVGPQHCSALCSSGQIYSWG---- 55
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+GL N L D+ +P +++ K VQ+ACGAAH+ +T DG KL+SWG
Sbjct: 56 IGL--NGRLGHGNIQDSSAPKMLAST----KKNCTAVQIACGAAHSAYLTQDG-KLYSWG 108
Query: 341 RGRSGVLGTGKTIDFFAPAIVL 362
RG +G LG G+ D + P +VL
Sbjct: 109 RGLNGELGNGERHDQWTPNLVL 130
>gi|325181521|emb|CCA15971.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 6906
Score = 100 bits (248), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/266 (32%), Positives = 125/266 (46%), Gaps = 38/266 (14%)
Query: 116 FTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
PSP+ G + VA G EH++A+ D YSWG N+ GQLGLG
Sbjct: 3208 IVPSPIPALSGIPITMVAASNGCEHMLAI--------SHDGAVYSWGYNDRGQLGLGTTV 3259
Query: 174 SRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
S+ P++IE+ + + + H+A++++ D+L TFG+ ++GQLG
Sbjct: 3260 SKSHTPRVIESLREK--YFITFAAVSYHHSAVVSNN---GDLL-----TFGMNDSGQLGL 3309
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLT 290
TQ P+ V+ L + V CGL+HT + GDV+S+G + LGL S T
Sbjct: 3310 DHTQHQHTPQLVETLSSQ-KVGRVACGLYHTVAIVDDGDVYSFGKNEYGQLGL----SHT 3364
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+N + I + P VQV CG HTV + + G K+ +WGR G LG G
Sbjct: 3365 QNTKVPMLVKIPPAPRTPMLDAVNKAVQVYCGYYHTVTILECG-KVVTWGRNDYGQLGIG 3423
Query: 351 ----KTIDFFAPAIVLWPPLTEEFKQ 372
K+I F P PLT K+
Sbjct: 3424 SKEHKSIAQFVPL-----PLTSRVKR 3444
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 125/293 (42%), Gaps = 50/293 (17%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTV 129
PI + + G LAI + GA++ WG D G G ++ S TP +
Sbjct: 3220 PITMVAASNGCEHMLAISHDGAVYSWG---YNDRGQLGLGTTVSKSHTPRVIESLREKYF 3276
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ A S H A+VS DL+ ++G N++GQLGL + + P+++ET S
Sbjct: 3277 ITFAAVSYHHSAVVS-----NNGDLL--TFGMNDSGQLGLDHTQHQHTPQLVETL---SS 3326
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK--EL 247
V V CG +HT + + ++FG E GQLG TQ+ VP VK
Sbjct: 3327 QKVGRVACGLYHTVAIVD--------DGDVYSFGKNEYGQLGLSHTQNTKVPMLVKIPPA 3378
Query: 248 PQYVYL------VSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDA 297
P+ L V V CG +HT + G V +WG + G+G + S+ +
Sbjct: 3379 PRTPMLDAVNKAVQVYCGYYHTVTILECGKVVTWGRNDYGQLGIGSKEHKSIAQ------ 3432
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P+ P + +CG HT+L+ +G + +GR G LG
Sbjct: 3433 FVPL---------PLTSRVKRASCGCYHTLLLLVNGRPM-VFGRNNKGQLGVA 3475
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 117/282 (41%), Gaps = 64/282 (22%)
Query: 120 PVWDFHGHTV--VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ H V + + G EH++A+ G + YSWG N+ GQLG + ++L
Sbjct: 427 PIQALRSHRVKYINASNGCEHLIAITDTG--------LAYSWGYNDRGQLGHENVGTKLY 478
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
PK+IE+ + + H+AL++ + +TFG+ + GQLG TQ
Sbjct: 479 LPKLIESIKEKK---MKSAAVSYHHSALVS--------VSGELYTFGMNDCGQLGLDHTQ 527
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG---------- 282
P+ VK L + ++ V CGL+H + + +G+V++ G + GLG
Sbjct: 528 HQSTPQLVKALLGH-HVSMVSCGLYHMVLCTISGEVFTCGKNDHGQLGLGHNKQVKVPTQ 586
Query: 283 -LCPNA----------------------SLTRNEAGDAISPILISGNGPHGPKFQDP--- 316
+ PN S RN+ G I N P
Sbjct: 587 VVLPNELVCFVACGYYHATAITSTGLTYSFGRNDYGQLGIGSKIHQNIPIALTISSNTRM 646
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
V ACG HT+L++D G +++ +GR G LG D P
Sbjct: 647 VHAACGCYHTLLMSDSG-QVFVFGRNNKGQLGNRGNTDSLLP 687
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 116/257 (45%), Gaps = 35/257 (13%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIE 182
F ++ +A G+E +V L+ G ++ G N +GQ G+G+ + RL P I
Sbjct: 3163 FSYKSIQSIAGGNEVLVVLMKDG--------AVFTCGLNKSGQCGIGNFDERLIVPSPIP 3214
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVP 241
+ P + + G H ++H + +++G + GQLG GTT S + P
Sbjct: 3215 ALS-GIPITMVAASNGCEHMLAISH--------DGAVYSWGYNDRGQLGLGTTVSKSHTP 3265
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAIS 299
++ L + ++ H++VVS+ GD+ ++GM LGL T+++ +
Sbjct: 3266 RVIESLREKYFITFAAVSYHHSAVVSNNGDLLTFGMNDSGQLGL----DHTQHQHTPQLV 3321
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
L S Q +VACG HTV + DDG ++S+G+ G LG T + P
Sbjct: 3322 ETLSS---------QKVGRVACGLYHTVAIVDDG-DVYSFGKNEYGQLGLSHTQNTKVPM 3371
Query: 360 IVLWPPLTEEFKQDELN 376
+V PP D +N
Sbjct: 3372 LVKIPPAPRTPMLDAVN 3388
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 91/214 (42%), Gaps = 32/214 (14%)
Query: 71 PIKICSVKAGGMMSLAIDN--------AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW 122
P I S+K M S A+ +G L+ +G + D G TP V
Sbjct: 480 PKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFG---MNDCGQLGLDHTQHQSTPQLVK 536
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
GH V V+CG H+V +GE ++ G N++GQLGLG + P +
Sbjct: 537 ALLGHHVSMVSCGLYHMVLCTISGEV--------FTCGKNDHGQLGLGHNKQVKVPTQVV 588
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N+ V V CG +H +T + ++FG + GQLG G+ +P
Sbjct: 589 LPNE----LVCFVACGYYHATAITS--------TGLTYSFGRNDYGQLGIGSKIHQNIPI 636
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ + +V CG +HT ++S +G V+ +G
Sbjct: 637 ALT-ISSNTRMVHAACGCYHTLLMSDSGQVFVFG 669
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 103/250 (41%), Gaps = 33/250 (13%)
Query: 123 DFHGHTVVKVA-CGSEHVVALVSAGETYK--GEDLVCYSWGANNNGQLGLGDRESR---L 176
D H + V CG +H+ +VS E D V + G N +GQ G G+ + R L
Sbjct: 366 DIERHQLTSVPLCGWDHIRQVVSGNEILAILTSDGVVLTCGLNKSGQCGHGNFDERVMLL 425
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
RP I+ + + G H +T + +++G + GQLGH
Sbjct: 426 RP--IQALRSHRVKYI-NASNGCEHLIAITD--------TGLAYSWGYNDRGQLGHENVG 474
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEA 294
+ L ++ E + + S H+++VS +G+++++GM LGL +
Sbjct: 475 TKLYLPKLIESIKEKKMKSAAVSYHHSALVSVSGELYTFGMNDCGQLGL--------DHT 526
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+P L+ H V+CG H VL T G ++++ G+ G LG G
Sbjct: 527 QHQSTPQLVKALLGHHVSM-----VSCGLYHMVLCTISG-EVFTCGKNDHGQLGLGHNKQ 580
Query: 355 FFAPAIVLWP 364
P V+ P
Sbjct: 581 VKVPTQVVLP 590
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V VACG H A+ S G TY S+G N+ GQLG+G S++ I S
Sbjct: 594 VCFVACGYYHATAITSTGLTY--------SFGRNDYGQLGIG---SKIHQNIPIALTISS 642
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH-GTTQSAL-VPEQVKE 246
+ CG +HT L++ + FG GQLG+ G T S L VP +V+
Sbjct: 643 NTRMVHAACGCYHTLLMSD--------SGQVFVFGRNNKGQLGNRGNTDSLLPVPLKVRP 694
Query: 247 LPQYVYLVSVDCGLFHTSVV 266
+ + G + TS++
Sbjct: 695 EKNMRRCLHIAAGFYTTSLI 714
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 56/140 (40%), Gaps = 11/140 (7%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C V G + AI + G + +G D G S + P + +V A
Sbjct: 594 VCFVACGYYHATAITSTGLTYSFGR---NDYGQLGIGSKIHQNIPIALTISSNTRMVHAA 650
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H + + +G+ + +G NN GQLG L P ++ + +
Sbjct: 651 CGCYHTLLMSDSGQVF--------VFGRNNKGQLGNRGNTDSLLPVPLKVRPEKNMRRCL 702
Query: 194 EVTCGSFHTALLTHRKRPND 213
+ G + T+L+ RKR ND
Sbjct: 703 HIAAGFYTTSLIVERKREND 722
>gi|379719198|ref|YP_005311329.1| protein ChiA12 [Paenibacillus mucilaginosus 3016]
gi|378567870|gb|AFC28180.1| ChiA12 [Paenibacillus mucilaginosus 3016]
Length = 1205
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/302 (28%), Positives = 126/302 (41%), Gaps = 47/302 (15%)
Query: 61 EDDSKTNHKAPIKICSVKAGG-MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS 119
E DS K+ + AGG +LA++ G +W WG L + ST G +P+
Sbjct: 27 ESDSVVAAKSTYSGIRMAAGGESHTLALNANGTVWAWGGGQLGNGSTTG--------SPA 78
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
PV H+V +A G H +A+ S G ++WG N GQLG G R P
Sbjct: 79 PVQVQDLHSVEAIAAGGSHNLAIKSDG--------TVWAWGFNGYGQLGDGSTTGRNTPV 130
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+E ++ H+ L + W +G E GQLG G+
Sbjct: 131 QVEGLR-----SIVGAAAHYDHSLALKS--------DGTVWAWGRNEYGQLGDGSKTDRH 177
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
P +VK L +V++ G ++ V S G VW+WG + G N S T++ A
Sbjct: 178 TPVRVKGLDS---VVAISSGFGYSLAVKSDGTVWAWGKNE-YGQLGNGSTTQSSA----- 228
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+ + G VA G H + + DG +WSWG +G LG G +D + P
Sbjct: 229 PVQVQG-------LHSVTAVASGDYHNLAIKRDG-TVWSWGPNLAGQLGDGSDMDRYTPV 280
Query: 360 IV 361
V
Sbjct: 281 QV 282
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 123/291 (42%), Gaps = 55/291 (18%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L + S T AP+++ ++ AGG +LAI + G +W WG L D ST G
Sbjct: 68 LGNGSTTGSPAPVQVQDLHSVEAIAAGGSHNLAIKSDGTVWAWGFNGYGQLGDGSTTG-- 125
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+PV ++V A +H +AL S G ++WG N GQLG G
Sbjct: 126 ------RNTPVQVEGLRSIVGAAAHYDHSLALKSDG--------TVWAWGRNEYGQLGDG 171
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ R P ++ + +V ++ G F +L + W +G E GQL
Sbjct: 172 SKTDRHTPVRVKGLD-----SVVAISSG-FGYSLAVKS-------DGTVWAWGKNEYGQL 218
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+G+T + P QV+ L + +V G +H + G VWSWG L + +
Sbjct: 219 GNGSTTQSSAPVQVQGLHS---VTAVASGDYHNLAIKRDGTVWSWGPNLAGQLGDGSDMD 275
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
R +P+ + G F V V G H++ + DG +W+WG
Sbjct: 276 R------YTPVQVEG-------FSSAVDVDAGFGHSLALKSDG-TVWAWGN 312
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 107/260 (41%), Gaps = 46/260 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D SKT+ P+++ ++ +G SLA+ + G +W WG + G S
Sbjct: 168 LGDGSKTDRHTPVRVKGLDSVVAISSGFGYSLAVKSDGTVWAWGKN---EYGQLGNGSTT 224
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V H +V VA G H +A+ D +SWG N GQLG G
Sbjct: 225 QSSAPVQVQGLH--SVTAVASGDYHNLAI--------KRDGTVWSWGPNLAGQLGDGSDM 274
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P +E F+ + +V G H+ L + W +G + + G G
Sbjct: 275 DRYTPVQVEGFS-----SAVDVDAGFGHSLALKS--------DGTVWAWGNYQFNEWGFG 321
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
++ P QV+EL +V + G H+ V + G VW+WG L S R
Sbjct: 322 SS----TPVQVQELDS---VVDIAAGTQHSLAVRNDGTVWAWGKNDNGQLGDGTSTAR-- 372
Query: 294 AGDAISPILISG-NGPHGPK 312
++PI + G GP P+
Sbjct: 373 ----LTPIKVQGFGGPEWPE 388
>gi|195060098|ref|XP_001995753.1| GH17927 [Drosophila grimshawi]
gi|193896539|gb|EDV95405.1| GH17927 [Drosophila grimshawi]
Length = 4933
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 2995 HQYVVKKVAVHSGGKHALALTLDGKVFSWGE---GEDGKLGHGNRTTLDKPRLVEALRAK 3051
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +ACGS H A+ S GE Y +WG G+LG GD ++L+PK++
Sbjct: 3052 KIRDIACGSSHSAAISSQGELY--------TWGLGEYGRLGHGDNATQLKPKLVTALCGS 3103
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 3104 R---VIQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERL 3154
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ +V ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 3155 -SGIGVVQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PIA- 3204
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3205 ------GLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3256
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P + +G +V
Sbjct: 4157 VKKVAVNSGGKHCLALTTDGEVYAWGE---GEDGKLGHGNRLSYDRPKLLEHLNGMSVAD 4213
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 4214 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEAL---LGYR 4262
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4263 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4315
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4316 GVIKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4364
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4365 -QGKKI---ISIATGSLHCVACSDAG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4413
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4298 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGK---GDFHRLGHGSVDH 4354
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA AGE Y+WG N+ GQLG G +
Sbjct: 4355 VRRPKKVAALQGKKIISIATGSLHCVACSDAGEV--------YTWGDNDEGQLGDGTVTA 4406
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4407 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4445
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 115/261 (44%), Gaps = 48/261 (18%)
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA--CGSEHVVAL 142
L + G L+ W + PD+ + P D T + +A C H +A+
Sbjct: 608 LLLSKEGKLYNW-HISKPDTEPQ----------PLDFGDIGSETFISIASHCEGRHFLAV 656
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+ YSWG +N +LG GD SR P IE+ + V V CG ++
Sbjct: 657 --------DNNFNAYSWGTGDNRRLGHGDCHSRELPTKIESLVRR----VKSVYCGCSYS 704
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCGLF 261
A +T L +T+G G G+LGHG + +P V L + V V++ G
Sbjct: 705 AAIT--------LRGNLYTWGRGNYGRLGHGISDDQCLPTMVMALKDHQVVDVALGSGDA 756
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT +++ G V++WG + G NAS ++ P+LI P+ Q +V
Sbjct: 757 HTLCLTNEGLVYAWG-DGDYGKLGNAS-----CNSSLQPLLIECL----PRVQ---RVFA 803
Query: 322 GAAHTVLVTDDGYKLWSWGRG 342
G+ ++ +T +G +L+SWG+
Sbjct: 804 GSQFSLALTGEG-QLYSWGKA 823
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 103/205 (50%), Gaps = 32/205 (15%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 209
+D ++ G NG+LGLG + P + +Q + V +V G H LT
Sbjct: 2962 QDGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQ---YVVKKVAVHSGGKHALALT--- 3015
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
L+ +++G GE+G+LGHG + P V+ L + + + CG H++ +SS
Sbjct: 3016 -----LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL-RAKKIRDIACGSSHSAAISSQ 3069
Query: 270 GDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
G++++WG+ E G LG NA+ + P L++ G + +QVACG+ A
Sbjct: 3070 GELYTWGLGEYGRLGHGDNAT--------QLKPKLVTALC--GSRV---IQVACGSRDAQ 3116
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTG 350
T+ +T+DG ++SWG G G LG G
Sbjct: 3117 TLALTEDG-AVFSWGDGDFGKLGRG 3140
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+D+ C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 2908 QDVPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFVVSQ- 2962
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 2963 -------DGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3015
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D +ACG++H
Sbjct: 3016 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---IACGSSH 3062
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 3063 SAAISSQG-ELYTWGLGEYGRLGHGDNATQLKPKLV 3097
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS S P IE+ IG + ++ G SLA+ AG
Sbjct: 3135 GKLGRGGSEGSATPHEIERLSGIG------------------VVQIECGAQFSLALTRAG 3176
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+W WG D G P P+ G V+ VA G+ H +A+ AG+
Sbjct: 3177 EVWTWGK---GDYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV--- 3230
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
Y+WG N++GQ G G+ +P ++ D+ + V V CGS H+
Sbjct: 3231 -----YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF-VNRVACGSSHS 3273
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ SV G S AI G L+ WG + G P+ V H VV V
Sbjct: 693 RVKSVYCGCSYSAAITLRGNLYTWGR---GNYGRLGHGISDDQCLPTMVMALKDHQVVDV 749
Query: 133 ACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
A GS H + L + G + Y+WG + G+LG S L+P +IE +
Sbjct: 750 ALGSGDAHTLCLTNEG--------LVYAWGDGDYGKLGNASCNSSLQPLLIECLPR---- 797
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V GS + LT + ++ C LG QL Q VP + L Q+
Sbjct: 798 -VQRVFAGSQFSLALTGEGQLYSWGKASC----LGH--QLVERNVQGCSVPRLITSL-QH 849
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+V V G+ H +SSAG+++ WG +CP
Sbjct: 850 KRIVDVAVGVTHCLALSSAGEIFGWGRNDNQQICP 884
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4073 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4124
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4125 ----FATGYGSGGRLGVGGSDSWSIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTDGEVY 4179
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4180 AWGEGEDGKLGHGNRLSYDRPKLLEHLNGMSVA-------------DIACGSAHSAAITA 4226
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4227 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4255
>gi|397599967|gb|EJK57568.1| hypothetical protein THAOC_22376, partial [Thalassiosira oceanica]
Length = 657
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 122/274 (44%), Gaps = 36/274 (13%)
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+ G ++ WG D G + P G + V CGS H A+ S G
Sbjct: 24 HGGGVYTWGR---GDDGRLGHGDNGWKYVPRLTHSLAGQVITHVTCGSYHTAAVSSKGNL 80
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ +WG G+LG G+ PK +++ AV ++ CGS HTA++T R
Sbjct: 81 F--------TWGGGMYGKLGHGNESGHSTPKRVDSL---VGLAVVDIACGSRHTAIVTSR 129
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+T+G ENG GHG T+ P+ ++ L + CG FHT ++
Sbjct: 130 --------GCLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKRVVQLSACG-FHTGCLT 180
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
AG+V++WG K L A RN + L+ + PVQ++CG H+
Sbjct: 181 DAGEVYTWGEGKFGRLGHGAE--RNCHSPRLVETLLG---------KRPVQISCGGFHSA 229
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+VT DG K++++G G G LG G ++ P +V
Sbjct: 230 VVTADG-KMYTFGGGEHGQLGHGDKVNKVKPTLV 262
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 131/294 (44%), Gaps = 46/294 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I V G + A+ + G L+ WG E G S TP V G VV
Sbjct: 61 ITHVTCGSYHTAAVSSKGNLFTWGGGMYGKLGHGNESGHS-----TPKRVDSLVGLAVVD 115
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPW 190
+ACGS H + S G Y+WG NG G GD E + PK++E +
Sbjct: 116 IACGSRHTAIVTSRG--------CLYTWGDKENGVAGHGDTEGHQYTPKLLERLSGKR-- 165
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +++ FHT LT D E +T+G G+ G+LGHG ++ P V+ L
Sbjct: 166 -VVQLSACGFHTGCLT------DAGE--VYTWGEGKFGRLGHGAERNCHSPRLVETLLGK 216
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V + CG FH++VV++ G ++++G + + L + + + P L+
Sbjct: 217 -RPVQISCGGFHSAVVTADGKMYTFGGGE------HGQLGHGDKVNKVKPTLV------- 262
Query: 311 PKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K D V Q+ CG +H+V +T +++++WG G G LG G P +V
Sbjct: 263 -KDLDGVFLTQITCGWSHSVALTSS-HEVYTWGNGDHGKLGHGCGKKVSTPQLV 314
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 99/208 (47%), Gaps = 28/208 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+ + + G + + + G L+ WG N TEG +TP + G
Sbjct: 111 LAVVDIACGSRHTAIVTSRGCLYTWGDKENGVAGHGDTEG-----HQYTPKLLERLSGKR 165
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+++ H L AGE Y +WG G+LG G + P+++ET
Sbjct: 166 VVQLSACGFHTGCLTDAGEVY--------TWGEGKFGRLGHGAERNCHSPRLVETLLGKR 217
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P +++CG FH+A++T + +TFG GE+GQLGHG + + P VK+L
Sbjct: 218 P---VQISCGGFHSAVVT--------ADGKMYTFGGGEHGQLGHGDKVNKVKPTLVKDLD 266
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
V+L + CG H+ ++S+ +V++WG
Sbjct: 267 G-VFLTQITCGWSHSVALTSSHEVYTWG 293
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 85/181 (46%), Gaps = 34/181 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFHG 126
++ + A G + + +AG ++ WG EG F + + +P V G
Sbjct: 165 RVVQLSACGFHTGCLTDAGEVYTWG---------EGKFGRLGHGAERNCHSPRLVETLLG 215
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V+++CG H + + G+ Y ++G +GQLG GD+ ++++P +++ +
Sbjct: 216 KRPVQISCGGFHSAVVTADGKMY--------TFGGGEHGQLGHGDKVNKVKPTLVKDLDG 267
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ ++TCG H+ LT +T+G G++G+LGHG + P+ V++
Sbjct: 268 ---VFLTQITCGWSHSVALTSSHE--------VYTWGNGDHGKLGHGCGKKVSTPQLVEK 316
Query: 247 L 247
L
Sbjct: 317 L 317
>gi|195133162|ref|XP_002011008.1| GI16306 [Drosophila mojavensis]
gi|193906983|gb|EDW05850.1| GI16306 [Drosophila mojavensis]
Length = 5077
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 136/297 (45%), Gaps = 37/297 (12%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 3144 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRSTLDKPRLVEALRAK 3200
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +ACGS H A+ S GE Y +WG G+LG GD ++L+PK++
Sbjct: 3201 KIRDIACGSSHSAAISSQGELY--------TWGLGEYGRLGHGDNATQLKPKLVAAL--- 3249
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
S V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 3250 SGRRVIQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSSTPHEIERL 3303
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD--AISPILISG 305
+ ++ ++CG + ++ AG+VW+WG L GD P I+G
Sbjct: 3304 -SGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRL--------GHGGDQHVRKPQPIAG 3354
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
H + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3355 LRGH-----RVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3405
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G +V
Sbjct: 4301 VKKVAVNSGGKHCLALTTDGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMSVAD 4357
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 4358 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEAL---LGYR 4406
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4407 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4459
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4460 GVIKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVEHVRRPKKVAAL--------- 4508
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4509 -QGKKI---ISIATGSLHCVACSDAG-EVFTWGDNDEGQLGDGTVTAIQRPRLV 4557
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 102/205 (49%), Gaps = 32/205 (15%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 209
+D Y+ G NG+LGLG + P + +Q + V +V G H LT
Sbjct: 3111 QDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQ---YVVKKVAVHSGGKHALALT--- 3164
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
L+ +++G GE+G+LGHG + P V+ L + + + CG H++ +SS
Sbjct: 3165 -----LDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEAL-RAKKIRDIACGSSHSAAISSQ 3218
Query: 270 GDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
G++++WG+ E G LG NA+ + + A+S + +QVACG+ A
Sbjct: 3219 GELYTWGLGEYGRLGHGDNATQLKPKLVAALSGRRV-------------IQVACGSRDAQ 3265
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTG 350
T+ +T+DG ++SWG G G LG G
Sbjct: 3266 TLALTEDG-AVFSWGDGDFGKLGRG 3289
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4442 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVEH 4498
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA AGE ++WG N+ GQLG G +
Sbjct: 4499 VRRPKKVAALQGKKIISIATGSLHCVACSDAGEV--------FTWGDNDEGQLGDGTVTA 4550
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4551 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4589
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 59/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ GH V+
Sbjct: 3306 IGVIQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIAGLRGHRVIH 3362
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ +
Sbjct: 3363 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALVIGLDA---VI 3411
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 3412 VNRVACGSSHS 3422
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 159 WGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG N+ QLG G + S+++ P T ++ P + GS +++ +
Sbjct: 3066 WGLNDKEQLG-GLKGSKVKVPTFSPTISRLRP---IHIAGGSKSLFVVSQ--------DG 3113
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSWG 276
+ G G NG+LG G T + +P Q+ L QYV V+V G H ++ G V+SWG
Sbjct: 3114 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3173
Query: 277 M-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
E G LG ++L + +A+ K +D +ACG++H+ ++ G
Sbjct: 3174 EGEDGKLGHGNRSTLDKPRLVEAL----------RAKKIRD---IACGSSHSAAISSQG- 3219
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG G G LG G P +V
Sbjct: 3220 ELYTWGLGEYGRLGHGDNATQLKPKLV 3246
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 103/223 (46%), Gaps = 37/223 (16%)
Query: 123 DFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
+ T + +A C H +A+ S + YSWG ++ +LG GD +R P
Sbjct: 640 EIANETFISIAAHCEGRHFLAVDS--------NFNAYSWGVGDSRRLGHGDCHARELPTK 691
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
IE+ + V V CG ++A +T L +T+G G G+LGHGT+ +
Sbjct: 692 IESLVR----LVKSVYCGCSYSAAIT--------LGGNLYTWGRGTYGRLGHGTSDDQCL 739
Query: 241 PEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
P V L + V V++ G HT ++S G V++WG + G N S ++
Sbjct: 740 PAMVMALKDHQVVDVALGSGDAHTLCLTSEGLVFAWG-DGDYGKLGNGS-----CNSSLL 793
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
P LI P+ Q +V GA ++ ++ +G +L+SWG+
Sbjct: 794 PQLIDCL----PRVQ---RVFAGAQFSLALSCEG-QLYSWGKA 828
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V+KV CGS+
Sbjct: 4414 SGDAQTLCITDDDNVWSWGDG---DYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQF 4470
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G E RPK + + + G
Sbjct: 4471 SVALTKSG--------AVYTWGKGDFHRLGHGSVEHVRRPKKVAALQGKK---IISIATG 4519
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + D E W G + GQLG GT + P V L Q ++V V C
Sbjct: 4520 SLHCVACS------DAGEVFTW--GDNDEGQLGDGTVTAIQRPRLVAAL-QGKHIVKVTC 4570
Query: 259 GLFHTSVVSSA 269
G HT +S++
Sbjct: 4571 GSAHTLALSTS 4581
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 60/219 (27%), Positives = 90/219 (41%), Gaps = 35/219 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 130
+ SV G S AI G L+ WG T G +S P+ V H VV
Sbjct: 699 VKSVYCGCSYSAAITLGGNLYTWGR------GTYGRLGHGTSDDQCLPAMVMALKDHQVV 752
Query: 131 KVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VA GS H + L S G + ++WG + G+LG G S L P++I+ +
Sbjct: 753 DVALGSGDAHTLCLTSEG--------LVFAWGDGDYGKLGNGSCNSSLLPQLIDCLPR-- 802
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE--NGQLGHGTTQSALVPEQVKE 246
V V G+ + L+ E +++G QL Q VP +
Sbjct: 803 ---VQRVFAGAQFSLALS--------CEGQLYSWGKASCLGHQLVERNVQGCSVPRLITG 851
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
L Q+ +V V G+ H +SS+G+++ WG +CP
Sbjct: 852 L-QHKRIVDVAVGVAHCLALSSSGEIFGWGRNDNQQICP 889
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G+G++ +LGHG + +P +++ L + V SV CG +++ ++ G++++WG +
Sbjct: 668 YSWGVGDSRRLGHGDCHARELPTKIESLVRLVK--SVYCGCSYSAAITLGGNLYTWG--R 723
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L + D P ++ H + D V + G AHT+ +T +G +++W
Sbjct: 724 GT----YGRLGHGTSDDQCLPAMVMALKDH--QVVD-VALGSGDAHTLCLTSEGL-VFAW 775
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G G LG G P ++
Sbjct: 776 GDGDYGKLGNGSCNSSLLPQLI 797
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4217 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4268
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4269 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTDGEVY 4323
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4324 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-------------DIACGSAHSAAITA 4370
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4371 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4399
>gi|351699519|gb|EHB02438.1| Putative E3 ubiquitin-protein ligase HERC2 [Heterocephalus glaber]
Length = 4833
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3050 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALRAKRIRD 3106
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3107 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3155
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3156 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3208
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3209 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3260
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3261 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3306
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 93/336 (27%), Positives = 146/336 (43%), Gaps = 49/336 (14%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DG+L +G + I ++ AP LE + I+ +V +GG LA+ + G
Sbjct: 4007 DGKLYATGYGAGGRLGIGGTESVSAPTLLE----SIQHVFIRKVAVNSGGKHCLALSSEG 4062
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG + G S P V G VV VA G H + +AG+
Sbjct: 4063 EVYSWGEA---EDGKLGHGSRSPCDRPRVVESLRGIEVVDVAAGGAHSACVTAAGD---- 4115
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS--FHTALLTHRK 209
Y+WG G+LG D E +L+PK++E V +V CGS T LT
Sbjct: 4116 ----LYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHR---VVDVACGSGDAQTLCLTD-- 4166
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ W++G G+ G+LG G + VP +++ L + +V V+CG + ++ +
Sbjct: 4167 ------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIESL-TGLGVVKVECGSQFSVALTKS 4219
Query: 270 GDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V++WG KG LG + + R G G K + +A G+ H
Sbjct: 4220 GAVYTWG--KGDYHRLGHGSDDHVRRPR----------QVQGLQGKKV---IAIATGSLH 4264
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V T+DG ++++WG G LG G T P +V
Sbjct: 4265 CVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4299
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVF--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K QD V+V CG+ +V +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLEVVKVRCGSQFSVALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G L S P P + + V KVA
Sbjct: 3001 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3056
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3057 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALRAKR---IR 3105
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3106 DIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3156
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3157 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3207
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3208 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3254
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 113/255 (44%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 3103 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3159
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E + +SWG + G+LG G E P+ IE N V
Sbjct: 3160 ACGSRDAQTLALTDEG------LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GV 3210
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT + WT+G G+ +LGHG+ P+ V+ L +
Sbjct: 3211 CQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKK 3261
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V G H V+ +G V++WG + G N + T N P L+ G +
Sbjct: 3262 IVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLE 3310
Query: 313 FQDPVQVACGAAHTV 327
Q +VACG++H+V
Sbjct: 3311 GQKITRVACGSSHSV 3325
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4095 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEVLQGHR 4148
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P IE+ +
Sbjct: 4149 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIESL---T 4199
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4200 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4250
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4251 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4302
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4303 --QGKKVN---RVACGSAHTL 4318
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 120/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3949 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4005
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 4006 ADGK--------LYATGYGAGGRLGIGGTESVSAPTLLESIQHVFIRKV-AVNSGGKHCL 4056
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG+ P V+ L + + +V V G H+
Sbjct: 4057 ALSS--------EGEVYSWGEAEDGKLGHGSRSPCDRPRVVESL-RGIEVVDVAAGGAHS 4107
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4108 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEVLQGH-----RVVDVACGS 4156
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4157 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4184
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3210 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3266
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3267 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3315
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3316 RVACGSSHSVAWT 3328
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 80/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLEVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL G+ Y SWG +N +LG G E P+++E + V +V G
Sbjct: 670 SVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPRLLEGLHGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 FSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDGG 526
Query: 282 GLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L ++ E P +IS +G G K V +ACG+ ++ +T +G +L++WG
Sbjct: 527 RLGHGDTVPLEE------PKVISAFSGKQGGKHV--VHIACGSTYSAAITAEG-ELYTWG 577
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
RG G LG G + D P +V
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLV 598
>gi|328873771|gb|EGG22137.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1859
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 134/292 (45%), Gaps = 44/292 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPL--PDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ICS+ G S A+ G ++MWG + P ST G SL P+ V VV
Sbjct: 625 EICSISCGSYYSAALTENGDVYMWGRGSVKNPPLSTLGNGSLEDQLLPTKVESL--SEVV 682
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V+ G H AL S GE +WG +GQLG GD ++ PK+++T S W
Sbjct: 683 LVSIGYYHSAALKSNGE--------LLTWGCGEDGQLGHGDVLNQTIPKVVQTMT--SHW 732
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V CG HT LT + +T+G E GQLG G TQ P V L +Y
Sbjct: 733 -VTQVQCGEKHTICLTKNGK--------VFTWGTSEYGQLGLGDTQKNCTPMLVTSLEKY 783
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGPH 309
++ + CG H +V+++A +V +G +G + + IS P+++
Sbjct: 784 -NIIQIACGSTHCAVLTNAREVLVFGNGAAMG-----------SANIISVPMMVP----- 826
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + +++CG T +T+ G +++WG G+ LG G P +V
Sbjct: 827 ALKHLNIERLSCGHYSTAALTECG-DVYTWGSGQE--LGHGTNQSELHPKLV 875
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 131/286 (45%), Gaps = 53/286 (18%)
Query: 87 IDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+D + WG NC L TEG S TP + +F+ + ++CGS + AL
Sbjct: 584 LDTQRGIMTWGSSSNCKL-GFKTEGREQ--SQATPERLPNFNIPEICSISCGSYYSAALT 640
Query: 144 SAGETYKGEDLVCYSWGANNN---GQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
G+ Y + G+ N LG G E +L P +E+ ++ V V+ G +
Sbjct: 641 ENGDVY------MWGRGSVKNPPLSTLGNGSLEDQLLPTKVESLSE-----VVLVSIGYY 689
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
H+A L K ++L T+G GE+GQLGHG + +P+ V+ + + ++ V CG
Sbjct: 690 HSAAL---KSNGELL-----TWGCGEDGQLGHGDVLNQTIPKVVQTMTSH-WVTQVQCGE 740
Query: 261 FHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
HT ++ G V++WG + GLG + +P+L++ + +
Sbjct: 741 KHTICLTKNGKVFTWGTSEYGQLGLG----------DTQKNCTPMLVTSLEKY-----NI 785
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID--FFAPAI 360
+Q+ACG+ H ++T + ++ +G G +G+ I PA+
Sbjct: 786 IQIACGSTHCAVLT-NAREVLVFGNG--AAMGSANIISVPMMVPAL 828
>gi|444911351|ref|ZP_21231526.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444718109|gb|ELW58925.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1085
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 125/305 (40%), Gaps = 49/305 (16%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T H P+++ V AGG SLA+ + G +W WGN + G
Sbjct: 719 LGDGTSTLHPVPVQVPGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQ-- 776
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P PV + V V+ G+ H +A+ S D ++WG N+ GQLG G
Sbjct: 777 ---RPRPVQVQGLGSAVAVSAGTNHSLAVQS--------DGTVWAWGGNSQGQLGDGTGI 825
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P + N V V+ GS H+ L + W +G GQLG
Sbjct: 826 TRYVPVRVSGLN-----GVMAVSAGSAHSLALRS--------DGTVWAWGYNFYGQLGDA 872
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T+ LVP QV P +VS+ G H+ V S G VW+WG L + R+
Sbjct: 873 TSTQRLVPIQV---PGLTGVVSIAAGTHHSLAVRSDGTVWAWGYNFYGQLGDGTKIQRSP 929
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
P+ + P V VA G H++ V +G +W+WG G LG G T
Sbjct: 930 ------PVQV-------PGLAGMVSVAAGTYHSLAVHSNG-TVWAWGYNNHGQLGDGTTT 975
Query: 354 DFFAP 358
P
Sbjct: 976 QRLLP 980
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 124/309 (40%), Gaps = 49/309 (15%)
Query: 59 SLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
+L D + +P+++ ++ AG SLA+D G++W WG + G +
Sbjct: 568 ALGDGTTLRRLSPVQVPGLSGVVALAAGNGYSLAVDAQGSVWAWGYNGM---GQLGDGTT 624
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
TP+ G VV +A G H +AL + D V ++WG N+ GQLG
Sbjct: 625 TPRVTPTQAPALSG--VVALAAGDSHSLALRA--------DGVAWAWGGNDQGQLGDATT 674
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R P + V + G+ H+ +L + ++G GQLG
Sbjct: 675 LERSTPAAVPGLAH-----VVALAAGNAHSLVL--------HADGTSSSWGNNAYGQLGD 721
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GT+ VP QV P + V G H+ V S G VW+WG L L R
Sbjct: 722 GTSTLHPVPVQV---PGPSAMKGVAAGGSHSLAVRSDGTVWAWGNNGSGELGDGTGLQRP 778
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P+ + G G V V+ G H++ V DG +W+WG G LG G
Sbjct: 779 R------PVQVQGLG-------SAVAVSAGTNHSLAVQSDG-TVWAWGGNSQGQLGDGTG 824
Query: 353 IDFFAPAIV 361
I + P V
Sbjct: 825 ITRYVPVRV 833
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 122/289 (42%), Gaps = 43/289 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ S+ AGG SLA+ G W WG+ DS + G SS P + +
Sbjct: 338 RMKSIAAGGAHSLAMRADGITWAWGD----DSQGQLGDGQ-SSQQLRPARVLGQRIRMPL 392
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G+ H +AL + D ++WG N GQLG G R P + V
Sbjct: 393 GTGNRHSLALHA--------DGTVWAWGVNTAGQLGDGTDLPRTLPVQVPGLA-----GV 439
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ ++ + H+ L R + W +G GQLG GTT L+P QV P
Sbjct: 440 HTLSATTSHS--LAARA------DGTVWAWGDNAFGQLGDGTTTQRLLPVQV---PGLAG 488
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ +V H+ VS G VW+WG L +L+R ++P+ + P
Sbjct: 489 VDTVSSMHQHSLAVSRDGTVWAWGFNGSGRLGDGTTLSR------LTPVQV-------PG 535
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V VA G+ H++ + DG +W+WG +G LG G T+ +P V
Sbjct: 536 LSSMVAVAAGSTHSLALRADG-TVWAWGDNSNGALGDGTTLRRLSPVQV 583
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 136/312 (43%), Gaps = 55/312 (17%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D S + PI++ S + AG SLA+ + G++W WG + L D +T
Sbjct: 119 LGDGSDAQSQVPIQVWSLNGVVAIAAGDHHSLALLSDGSVWAWGYNAHGQLGDDTT---- 174
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
V+S P V G VV ++ GS H +A++S G+ +WG N GQLG G
Sbjct: 175 --VASPLPVQVQGLSG--VVALSAGSTHSLAVLSDGK--------VKAWGDNYYGQLGDG 222
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R P ++ + V V G+FH+ L + +G +GQL
Sbjct: 223 SSTERWTPVLVSSLT-----GVKSVVAGTFHSLALCS--------DGTVRAWGENGSGQL 269
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G +T VP V P + ++ G H+ + S G V +WG G N +++
Sbjct: 270 GISSTTRRPVPVVV---PGLTNVQALAAGSAHSLALRSDGTVRAWGNND-HGQVGNGTIS 325
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ ++P+ + G G + + +A G AH++ + DG W+WG G LG G
Sbjct: 326 QQ-----LTPVQVPGVG----RMKS---IAAGGAHSLAMRADGIT-WAWGDDSQGQLGDG 372
Query: 351 KTIDFFAPAIVL 362
++ PA VL
Sbjct: 373 QSSQQLRPARVL 384
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/311 (26%), Positives = 127/311 (40%), Gaps = 56/311 (18%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + P+++ +V AG SLA+ + G +W WG L D+++
Sbjct: 819 LGDGTGITRYVPVRVSGLNGVMAVSAGSAHSLALRSDGTVWAWGYNFYGQLGDATS---- 874
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
P V G VV +A G+ H +A+ S D ++WG N GQLG G
Sbjct: 875 --TQRLVPIQVPGLTG--VVSIAAGTHHSLAVRS--------DGTVWAWGYNFYGQLGDG 922
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ R P + + V G++H+ L H W +G +GQL
Sbjct: 923 TKIQRSPPVQVPGLA-----GMVSVAAGTYHS-LAVHSN-------GTVWAWGYNNHGQL 969
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GTT L+P + + + +H+ VV + G VW WG L ++
Sbjct: 970 GDGTTTQRLLPVPISSSSGVIAAAAN----WHSLVVRTDGTVWGWGSNNASQLGDGSTSD 1025
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R +P + P+G + ++ GA H++ + DG +W+WG G SG LG G
Sbjct: 1026 RKMP----TPSSV----PNGVR-----SISSGANHSLALRSDG-TVWAWGFGNSGQLGDG 1071
Query: 351 KTIDFFAPAIV 361
PA V
Sbjct: 1072 VMSMRLVPAGV 1082
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/346 (26%), Positives = 137/346 (39%), Gaps = 75/346 (21%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P+++ +V + SLA+ G +W WG S G + +
Sbjct: 469 LGDGTTTQRLLPVQVPGLAGVDTVSSMHQHSLAVSRDGTVWAWG---FNGSGRLGDGTTL 525
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S TP V ++V VA GS H +AL + D ++WG N+NG LG G
Sbjct: 526 SRLTPVQVPGLS--SMVAVAAGSTHSLALRA--------DGTVWAWGDNSNGALGDGTTL 575
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P + + V + G+ ++ + + W +G GQLG G
Sbjct: 576 RRLSPVQVPGLS-----GVVALAAGNGYSLAVD--------AQGSVWAWGYNGMGQLGDG 622
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN- 292
TT + P Q L V L + D H+ + + G W+WG L +L R+
Sbjct: 623 TTTPRVTPTQAPALSGVVALAAGDS---HSLALRADGVAWAWGGNDQGQLGDATTLERST 679
Query: 293 -------------EAGDAISPILIS-------GNGPHGPKFQD--------PVQ------ 318
AG+A S +L + GN +G + D PVQ
Sbjct: 680 PAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYG-QLGDGTSTLHPVPVQVPGPSA 738
Query: 319 ---VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA G +H++ V DG +W+WG SG LG G + P V
Sbjct: 739 MKGVAAGGSHSLAVRSDG-TVWAWGNNGSGELGDGTGLQRPRPVQV 783
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 127/312 (40%), Gaps = 51/312 (16%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
+G +LE + + ++ AG SL + G WGN L D +
Sbjct: 669 LGDATTLERSTPAAVPGLAHVVALAAGNAHSLVLHADGTSSSWGNNAYGQLGDGT----- 723
Query: 111 SLVSSFTPSPVWDFHGHTVVK-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S+ P PV G + +K VA G H +A+ S D ++WG N +G+LG
Sbjct: 724 ---STLHPVPV-QVPGPSAMKGVAAGGSHSLAVRS--------DGTVWAWGNNGSGELGD 771
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G R RP ++ + V+ G+ H+ + + W +G GQ
Sbjct: 772 GTGLQRPRPVQVQGLG-----SAVAVSAGTNHSLAVQS--------DGTVWAWGGNSQGQ 818
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GT + VP +V L +++V G H+ + S G VW+WG G +A+
Sbjct: 819 LGDGTGITRYVPVRVSGLNG---VMAVSAGSAHSLALRSDGTVWAWGYNF-YGQLGDATS 874
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
T+ + PI + P V +A G H++ V DG +W+WG G LG
Sbjct: 875 TQR-----LVPIQV-------PGLTGVVSIAAGTHHSLAVRSDG-TVWAWGYNFYGQLGD 921
Query: 350 GKTIDFFAPAIV 361
G I P V
Sbjct: 922 GTKIQRSPPVQV 933
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 120/299 (40%), Gaps = 47/299 (15%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS-PVWDFHGHTV 129
P+ V AG SL + + G +W WG+ +T G + T PV +V
Sbjct: 36 PLGHEQVAAGAAHSLMLRSDGTVWAWGD------NTYGQLGDGTGITQRLPVRVQSLDSV 89
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V +A G +H +AL S D ++WG N GQLG G P + + N
Sbjct: 90 VALAVGYQHSLALRS--------DGTVWAWGDNFFGQLGDGSDAQSQVPIQVWSLN---- 137
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + G H+ L + + W +G +GQLG TT ++ +P QV+ L
Sbjct: 138 -GVVAIAAGDHHSLAL--------LSDGSVWAWGYNAHGQLGDDTTVASPLPVQVQGLSG 188
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V L G H+ V S G V +WG L +S R +P+L+S
Sbjct: 189 VVAL---SAGSTHSLAVLSDGKVKAWGDNYYGQLGDGSSTER------WTPVLVS----- 234
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
V G H++ + DG + +WG SG LG T P +V P LT
Sbjct: 235 --SLTGVKSVVAGTFHSLALCSDG-TVRAWGENGSGQLGISSTTRRPVPVVV--PGLTN 288
>gi|194767960|ref|XP_001966082.1| GF19414 [Drosophila ananassae]
gi|190622967|gb|EDV38491.1| GF19414 [Drosophila ananassae]
Length = 5087
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 3157 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRQVEALRAK 3213
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VACGS H A+ S GE Y+WG G+LG GD ++L+PK++
Sbjct: 3214 KIRDVACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNATQLKPKLVAALAGR 3265
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 3266 R---VVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 3316
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ ++ ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 3317 -SGIGVIQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI-- 3365
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3366 -----GGLRGRRVIHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3418
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + VS P V HG +V
Sbjct: 4311 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRVSYDRPKLVEHLHGMSVAD 4367
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G+ +WG G+LG GD E +LRPK++E +
Sbjct: 4368 IACGSAHSAAITASGQVL--------TWGKGRYGRLGHGDSEDQLRPKLVEALLG---YR 4416
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4417 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESL-AGL 4469
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4470 GVIKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4518
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4519 -QGKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4567
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4452 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 4508
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 4509 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 4560
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4561 IQRPRLVSALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4599
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 3070 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQE 3125
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
R + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3126 GR--------VFACGEGTNGRLGLGVTYNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3177
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 3178 LDGKVFSWGEGEDGKLGHGNRTTLDKPRQVEAL----------RAKKIRD---VACGSSH 3224
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 3225 SAAISSQG-ELYTWGLGEYGRLGHGDNATQLKPKLV 3259
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 105/232 (45%), Gaps = 44/232 (18%)
Query: 118 PSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P+ + T + +A C H +A+ S + YSWGA + +LG GD +R
Sbjct: 620 PQPLEEAGHETFISIAGHCEGRHFMAIDS--------NHNAYSWGAGEDHRLGHGDTHAR 671
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P I Q V V CG ++A++T T+G G +LGHG +
Sbjct: 672 AVPTKIAALEQH---CVQSVFCGCTYSAVIT--------CGGNLLTWGRGTYARLGHGNS 720
Query: 236 QSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
+P V L ++ + V++ G H+ ++S G V++WG + G G C N SL
Sbjct: 721 DDRCLPTLVAALAEHTVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC-NGSL- 778
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
PIL+ P+ Q ++ G+ ++V ++ +G ++++WG+
Sbjct: 779 --------QPILVESL----PRVQ---RIFAGSQYSVALSSEG-QVYTWGKA 814
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 72/142 (50%), Gaps = 11/142 (7%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++V++ G++ +WG
Sbjct: 653 YSWGAGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVFCGCTYSAVITCGGNLLTWGRGT 711
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
A L + D P L++ H D V + G AH++ +T +G +++W
Sbjct: 712 ------YARLGHGNSDDRCLPTLVAALAEH--TVVD-VALGSGDAHSLALTSEGL-VFAW 761
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G G LG G P +V
Sbjct: 762 GDGDYGKLGNGNCNGSLQPILV 783
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 83/176 (47%), Gaps = 30/176 (17%)
Query: 118 PSPVWDFHGHTVVKVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P+ V HTVV VA GS H +AL S G + ++WG + G+LG G+
Sbjct: 726 PTLVAALAEHTVVDVALGSGDAHSLALTSEG--------LVFAWGDGDYGKLGNGNCNGS 777
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG----LGENGQLG 231
L+P ++E+ + V + GS ++ L+ E +T+G LG QL
Sbjct: 778 LQPILVESLPR-----VQRIFAGSQYSVALSS--------EGQVYTWGKATCLGH--QLV 822
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
+ Q VP V L Q+ +V + G+ H +SS+G+V+ WG +CP++
Sbjct: 823 ERSVQGCSVPRLVSSL-QHKRIVDMAVGVAHCLALSSSGEVFGWGRNDCQQVCPSS 877
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 77/191 (40%), Gaps = 23/191 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V+KV CGS+
Sbjct: 4424 SGDAQTLCITDDDNVWSWGDG---DYGKLGRGGSDGCKLPYKIESLAGLGVIKVECGSQF 4480
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RPK + + + G
Sbjct: 4481 SVALTKSG--------AVYTWGKGDFHRLGHGSVDHVRRPKKVAALQGKK---IISIATG 4529
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H + +T+G + GQLG GT + P V L Q ++V V C
Sbjct: 4530 SLHCVACSD--------SGEVYTWGDNDEGQLGDGTVTAIQRPRLVSAL-QGKHIVKVTC 4580
Query: 259 GLFHTSVVSSA 269
G HT +S++
Sbjct: 4581 GSAHTLALSTS 4591
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 3319 IGVIQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIH 3375
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ +G+ Y+WG N++GQ G G+ +P ++ +
Sbjct: 3376 VAVGALHCLAVTDSGQV--------YAWGDNDHGQQGSGNTFVNKKPALVIGLDD---VF 3424
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 3425 VNRVACGSSHS 3435
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4227 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4278
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4279 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4333
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + + HG D +ACG+AH+ +T
Sbjct: 4334 AWGEGEDGKLGHGNRVSYDRPKLVEHL----------HGMSVAD---IACGSAHSAAITA 4380
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++ +WG+GR G LG G + D P +V
Sbjct: 4381 SG-QVLTWGKGRYGRLGHGDSEDQLRPKLV 4409
>gi|148908280|gb|ABR17254.1| unknown [Picea sitchensis]
Length = 286
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 113/239 (47%), Gaps = 31/239 (12%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
D V+ ++ G+ H VALV+ +LVC SWG +GQLG GD E R P +
Sbjct: 10 DGQRRKVLLISAGASHTVALVAG-------NLVC-SWGRGEDGQLGHGDAEDRPMPTFVS 61
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
+ + V CG+ HT + + + +++G G+ G+LGHG + +P
Sbjct: 62 ALD---GCEITSVICGADHTTAYSDSRL-------VVYSWGWGDFGRLGHGNSSDLFIPH 111
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+K L Q + + + CG H V+ G+V SWG + N L + D P
Sbjct: 112 AIKTL-QGLQIKQIACGDSHCLAVTINGEVQSWGRNQ------NGQLGVGDNIDHSFPQR 164
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ P ++ VQV+CG HTV +T ++SWGRG SG LG G +D P ++
Sbjct: 165 VK-----LPAEEEVVQVSCGWRHTVAITGK-SNVFSWGRGTSGQLGHGDILDRNMPVLI 217
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 83/189 (43%), Gaps = 26/189 (13%)
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
T N V ++ G+ HT L + ++ ++G GE+GQLGHG + +P
Sbjct: 7 TRNDGQRRKVLLISAGASHTVAL--------VAGNLVCSWGRGEDGQLGHGDAEDRPMPT 58
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDV---WSWGMEKGLGLCPNASLTRNEAGDAIS 299
V L + SV CG HT+ S + V W WG LG ++ L A +
Sbjct: 59 FVSAL-DGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPHAIKTLQ 117
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
+ I Q+ACG +H + VT +G ++ SWGR ++G LG G ID P
Sbjct: 118 GLQIK-------------QIACGDSHCLAVTING-EVQSWGRNQNGQLGVGDNIDHSFPQ 163
Query: 360 IVLWPPLTE 368
V P E
Sbjct: 164 RVKLPAEEE 172
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 66/142 (46%), Gaps = 26/142 (18%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F P + G + ++ACG H +A+ GE SWG N NGQLG+GD
Sbjct: 108 FIPHAIKTLQGLQIKQIACGDSHCLAVTINGEV--------QSWGRNQNGQLGVGDNIDH 159
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P+ ++ ++ V +V+CG HT +T + S +++G G +GQLGHG
Sbjct: 160 SFPQRVKLPAEEE---VVQVSCGWRHTVAITGK--------SNVFSWGRGTSGQLGHGDI 208
Query: 236 QSALVPEQVKELPQYVYLVSVD 257
+ +P + +SVD
Sbjct: 209 LD-------RNMPVLIEALSVD 223
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
V E + Q ++ + G HT + + V SWG + + L +A D
Sbjct: 3 VEEATRNDGQRRKVLLISAGASHTVALVAGNLVCSWGRGE------DGQLGHGDAEDRPM 56
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P +S + V CGA HT +D ++SWG G G LG G + D F P
Sbjct: 57 PTFVSA-----LDGCEITSVICGADHTTAYSDSRLVVYSWGWGDFGRLGHGNSSDLFIPH 111
Query: 360 IV 361
+
Sbjct: 112 AI 113
>gi|444915471|ref|ZP_21235603.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713402|gb|ELW54302.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 752
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 129/306 (42%), Gaps = 48/306 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L S+ + +P+++ +V AG SL +++ G LW WG+ G +L
Sbjct: 332 LGGGSRAHAASPVQVLGVSGAVAVAAGYRHSLVVNSDGTLWAWGSNL---DGQRGDGTLT 388
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP V G VV VA G HV+AL+S D ++WG N +GQLG G R
Sbjct: 389 RYPTPGRVPGLSG--VVSVAAGGGHVLALLS--------DGTVWAWGDNASGQLGDGTRH 438
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
SR P+ + + V V GS + + + + W++G GQLGHG
Sbjct: 439 SRWVPRQVPELS-----GVVAVAAGSSFSLAVRY--------DGSVWSWGDNAYGQLGHG 485
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T ++ VP V+EL + +V+V G H V + G VW WG +
Sbjct: 486 STDASSVPLHVRELSE---VVAVAAGSMHALAVRADGTVWGWGFND-----------YGQ 531
Query: 294 AGDAISPILISGNGP-HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
GD I P P V VA H++ V DG +W+WG LG G T
Sbjct: 532 LGDGFEGISARRYSPVQVPGLSGMVSVAADFGHSLAVRADG-TVWAWGNNTDSELGDGTT 590
Query: 353 IDFFAP 358
P
Sbjct: 591 TRRLVP 596
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/310 (28%), Positives = 128/310 (41%), Gaps = 51/310 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L DD++ N P+++ SV AG SLA+ + G++W WG S G +
Sbjct: 130 LGDDTRDNRTVPVQVTGLSGVVSVVAGDTHSLAVRSDGSVWAWGRNT---SGQLGDGTRD 186
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V G VV VA G H +A+ S G ++WG N +GQLG
Sbjct: 187 DRAVPVQVTGLSG--VVSVAAGGNHSLAVRSDGS--------VWAWGNNASGQLGGAPEA 236
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P +E + V V G +H+ + + + W +G GQLG G
Sbjct: 237 AYPVPWRVEDVS-----GVVAVAAGQYHSLAVRY--------DGTVWAWGDNLYGQLGDG 283
Query: 234 TTQ--SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
+ S +P+QV P +V+V G +H+ VV S G VW+WG L
Sbjct: 284 KLEGNSRWLPKQV---PGLGGVVAVSAGFYHSLVVRSDGTVWAWGNNA------YGQLGG 334
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
A SP+ + G V VA G H+++V DG LW+WG G G G
Sbjct: 335 GSRAHAASPVQVLG-------VSGAVAVAAGYRHSLVVNSDG-TLWAWGSNLDGQRGDGT 386
Query: 352 TIDFFAPAIV 361
+ P V
Sbjct: 387 LTRYPTPGRV 396
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 83/206 (40%), Gaps = 30/206 (14%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D ++ G N +GQLG G SR P ++ + V V G H+ L +
Sbjct: 66 DGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLS-----GVAAVAAGHGHSLALRY----- 115
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ W +G GQLG T + VP QV L V +V+ D H+ V S G V
Sbjct: 116 ---DGTVWAWGNNAYGQLGDDTRDNRTVPVQVTGLSGVVSVVAGDT---HSLAVRSDGSV 169
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+WG + L D P+ ++G V VA G H++ V D
Sbjct: 170 WAWGRNT------SGQLGDGTRDDRAVPVQVTG-------LSGVVSVAAGGNHSLAVRSD 216
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAP 358
G +W+WG SG LG + P
Sbjct: 217 G-SVWAWGNNASGQLGGAPEAAYPVP 241
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 93/343 (27%), Positives = 133/343 (38%), Gaps = 70/343 (20%)
Query: 62 DDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
D + T + P ++ SV AGG LA+ + G +W WG+ S G + S
Sbjct: 384 DGTLTRYPTPGRVPGLSGVVSVAAGGGHVLALLSDGTVWAWGDNA---SGQLGDGTRHSR 440
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+ P V + G VV VA GS +A+ Y G +SWG N GQLG G ++
Sbjct: 441 WVPRQVPELSG--VVAVAAGSSFSLAV-----RYDGS---VWSWGDNAYGQLGHGSTDAS 490
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P + ++ V V GS H L R + W +G + GQLG G
Sbjct: 491 SVPLHVRELSE-----VVAVAAGSMHA--LAVRA------DGTVWGWGFNDYGQLGDGFE 537
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLG-----LCP- 285
+ ++P +VSV H+ V + G VW+WG E G G L P
Sbjct: 538 GISARRYSPVQVPGLSGMVSVAADFGHSLAVRADGTVWAWGNNTDSELGDGTTTRRLVPL 597
Query: 286 -----------NASLTRNEAGDAISPILISGNGPHGP-------------KFQDPVQ--- 318
+A + A A + G G + Q PV+
Sbjct: 598 RVNAPGTVALLSAGYNYSMAMRADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGPVRAST 657
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G +H++ V DG+ LW+WG G LG G P V
Sbjct: 658 LAAGQSHSMAVGSDGF-LWAWGFNFEGQLGDGTLTHHALPVRV 699
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 42/278 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 131
++ +V AG M +LA+ G +W WG D G GF +S+ SPV +V
Sbjct: 501 EVVAVAAGSMHALAVRADGTVWGWG---FNDYGQLGDGFEGISARRYSPVQVPGLSGMVS 557
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA H +A+ + D ++WG N + +LG G RL P ++P
Sbjct: 558 VAADFGHSLAVRA--------DGTVWAWGNNTDSELGDGTTTRRLVP-----LRVNAPGT 604
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ G ++ + + W +G GQLG G+T S VP +V+ V
Sbjct: 605 VALLSAGYNYSMAM--------RADGSLWAWGTNFAGQLGDGSTTSRAVPVRVQGP---V 653
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ G H+ V S G +W+WG G + +LT + P+ + P
Sbjct: 654 RASTLAAGQSHSMAVGSDGFLWAWGFNF-EGQLGDGTLTHHAL-----PVRV-------P 700
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
V V ++ V DG LW+WG G LGT
Sbjct: 701 GMSGVVAVDVTLNLSLAVRSDG-SLWAWGNNDVGQLGT 737
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 62/146 (42%), Gaps = 17/146 (11%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ WT G +GQLG GTT S P QV+ L + +V G H+ + G VW+W
Sbjct: 66 DGTVWTTGGNGHGQLGDGTTLSRRTPVQVQGLSG---VAAVAAGHGHSLALRYDGTVWAW 122
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G L + + P+ ++G V V G H++ V DG
Sbjct: 123 GNNA------YGQLGDDTRDNRTVPVQVTG-------LSGVVSVVAGDTHSLAVRSDG-S 168
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+W+WGR SG LG G D P V
Sbjct: 169 VWAWGRNTSGQLGDGTRDDRAVPVQV 194
>gi|196005109|ref|XP_002112421.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
gi|190584462|gb|EDV24531.1| hypothetical protein TRIADDRAFT_56425 [Trichoplax adhaerens]
Length = 4625
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V GG SL I G ++ WG G + S +P+ + +V+
Sbjct: 2956 VKKVTVHPGGRHSLCITREGKVFSWGEGI---DGKLGHGDVTSRLSPTLIEALESKLIVE 3012
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ + GE Y+WG + G+LG GD ++ PK ++ QD +
Sbjct: 3013 IACGSSHSAAVTADGE--------LYTWGLGDYGRLGHGDSKTLHIPKQVKAL-QD--YK 3061
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++ CGS L + ++ C W++G G+ G+LG G ++ +P+++ L
Sbjct: 3062 VIDIACGSRDAQTLA-------LTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDALCGR 3114
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ + CG + +S+ G VW+WG KG L SP LI G
Sbjct: 3115 -DVCRIACGAQFSLALSTTGKVWTWG--KG----DYYRLGHGNDSHYRSPQLIEG----P 3163
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
K + ++A GA H + VTD G +++SWG G G G T P I L
Sbjct: 3164 LKKKRITEIAVGALHCLAVTDTG-EVYSWGDNDHGQQGNGNTTVNKRPQICL 3214
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 43/295 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ SV +GG ++ + + ++ WG+ + G +SS TP + G +V
Sbjct: 3857 IEKLSVHSGGRHAMVLTSNFEVFSWGD---GEDGKLGHGDKLSSETPRKIEALLGKQIVH 3913
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CGS H A+ S GE Y+WG G+LG GD + L+PK++E +
Sbjct: 3914 ISCGSSHSAAITSKGE--------LYTWGKGRYGRLGHGDGDDCLKPKLLEALKS---YK 3962
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V CGS L + + C W++G G+ G+LG G + P +++ L
Sbjct: 3963 VIDVACGSGDAQTLA-------ITDDDCVWSWGDGDYGKLGRGGSDGCKKPLRIESLIG- 4014
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGN 306
+ + V+CG + ++ GD+++WG KG LG N + R + I
Sbjct: 4015 MAVCKVECGSQFSVALTKNGDLYTWG--KGDYYRLGHGTNDHVRRPRKVACLQGKQI--- 4069
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V VA G+ H V TD G ++++WG G LG G P +V
Sbjct: 4070 ----------VTVAAGSLHCVACTDAG-EVFTWGDNDEGQLGNGTLNPIPEPTLV 4113
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 114/246 (46%), Gaps = 38/246 (15%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+ H V V G H + + G+ + SWG +G+LG GD SRL P +IE
Sbjct: 2952 NMHFVKKVTVHPGGRHSLCITREGKVF--------SWGEGIDGKLGHGDVTSRLSPTLIE 3003
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
+ E+ CGS H+A +T + +T+GLG+ G+LGHG +++ +P+
Sbjct: 3004 ALESK---LIVEIACGSSHSAAVT--------ADGELYTWGLGDYGRLGHGDSKTLHIPK 3052
Query: 243 QVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAI 298
QVK L Y ++ + CG T ++ VWSWG LG + + DA+
Sbjct: 3053 QVKALQDY-KVIDIACGSRDAQTLALTDNNCVWSWGDGDFGKLGRGGSEGCNIPQKIDAL 3111
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+D ++ACGA ++ ++ G K+W+WG+G LG G + +P
Sbjct: 3112 CG-------------RDVCRIACGAQFSLALSTTG-KVWTWGKGDYYRLGHGNDSHYRSP 3157
Query: 359 AIVLWP 364
++ P
Sbjct: 3158 QLIEGP 3163
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 119/272 (43%), Gaps = 39/272 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTV 129
IK + G LA+ + G ++ WG S +GG P V + +
Sbjct: 513 IKKIAANVEGEHYLALSSDGCVYSWG-------SGDGGRLGHGDIRREPELVKELVNKKI 565
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
++ACGS + A+ S GE Y+WG + G+LG G+ E RL P ++ S
Sbjct: 566 TQIACGSTYSAAVTSNGE--------LYTWGRGSYGRLGHGNSEDRLLPTLVAGL---SG 614
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS L K + + W++G G+ G+LG G + VP+ V+ L
Sbjct: 615 SHVVDVACGSGDAHTLAIDK------DGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKH 668
Query: 250 Y-VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ Y+V+V CG + + G VW+WG G L P ++ G
Sbjct: 669 HNKYIVNVLCGSQFSVALGKDGTVWTWGKSDGY------RLGHGTLDHVRYPKMVEGLIN 722
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+ V +A G +H + +TD+ ++++WG
Sbjct: 723 Y-----HIVDIAVGPSHCLALTDN-CQIFTWG 748
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 106/234 (45%), Gaps = 40/234 (17%)
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII-ETFNQDSPWAVYEV 195
EH +AL S G YSWG+ + G+LG GD R P+++ E N+ + ++
Sbjct: 523 EHYLALSSDG--------CVYSWGSGDGGRLGHGD--IRREPELVKELVNK----KITQI 568
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLV 254
CGS ++A +T +T+G G G+LGHG ++ L+P V L +V V
Sbjct: 569 ACGSTYSAAVTSNGE--------LYTWGRGSYGRLGHGNSEDRLLPTLVAGLSGSHVVDV 620
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
+ G HT + G VWSWG + G L R + P ++ H
Sbjct: 621 ACGSGDAHTLAIDKDGIVWSWG-DGDYG-----KLGRGGSDCCKVPKVVETLKHHNKYI- 673
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
V V CG+ +V + DG +W+WG+ LG G T+D V +P + E
Sbjct: 674 --VNVLCGSQFSVALGKDG-TVWTWGKSDGYRLGHG-TLDH-----VRYPKMVE 718
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 37/264 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G S A+ + G L+ WG G + P+ V G VV V
Sbjct: 564 KITQIACGSTYSAAVTSNGELYTWGRGSY---GRLGHGNSEDRLLPTLVAGLSGSHVVDV 620
Query: 133 ACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
ACGS H +A+ +D + +SWG + G+LG G + PK++ET + +
Sbjct: 621 ACGSGDAHTLAI--------DKDGIVWSWGDGDYGKLGRGGSDCCKVPKVVETLKHHNKY 672
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V CGS + L + WT+G + +LGHGT P+ V+ L Y
Sbjct: 673 IV-NVLCGSQFSVALGK--------DGTVWTWGKSDGYRLGHGTLDHVRYPKMVEGLINY 723
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGME-KGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++V + G H ++ +++WG + + L + AI+ I+G
Sbjct: 724 -HIVDIAVGPSHCLALTDNCQIFTWGSDVQKYALSSDNYNMEPTCISAINKEFIAG---- 778
Query: 310 GPKFQDPVQVACGAAHTVLVTDDG 333
VACG A L T G
Sbjct: 779 ---------VACGPAQNFLWTSGG 793
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 102/211 (48%), Gaps = 26/211 (12%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
D + WG N+ GQLG G + S+++ P ++ P + GS ++T+
Sbjct: 2868 DSRVFVWGLNDKGQLG-GCKGSKVKSPTEMKNIAALRP---VSIAGGSKTVFIVTY---- 2919
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAG 270
+ + G G NG+LG G T++ +P Q+ L +V V+V G H+ ++ G
Sbjct: 2920 ----DGKVYVSGEGANGRLGLGNTENISIPVQLDTLNMHFVKKVTVHPGGRHSLCITREG 2975
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
V+SWG +G+ + L + +SP LI + + V++ACG++H+ VT
Sbjct: 2976 KVFSWG--EGI----DGKLGHGDVTSRLSPTLI-----EALESKLIVEIACGSSHSAAVT 3024
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG +L++WG G G LG G + P V
Sbjct: 3025 ADG-ELYTWGLGDYGRLGHGDSKTLHIPKQV 3054
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 94/221 (42%), Gaps = 32/221 (14%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G + + L S G+ Y G + + + P IIE Q
Sbjct: 3808 VAGGEQTLFILTSEGKVYASGLGGSGRLGIGRSDNI--------VTPVIIEPL-QHLKIE 3858
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V G H +LT E W G GE+G+LGHG S+ P +++ L
Sbjct: 3859 KLSVHSGGRHAMVLTSN------FEVFSW--GDGEDGKLGHGDKLSSETPRKIEALLGK- 3909
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V + CG H++ ++S G++++WG + L + D + P L+
Sbjct: 3910 QIVHISCGSSHSAAITSKGELYTWGKGR------YGRLGHGDGDDCLKPKLL-----EAL 3958
Query: 312 KFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
K + VACG+ A T+ +TDD +WSWG G G LG G
Sbjct: 3959 KSYKVIDVACGSGDAQTLAITDDDC-VWSWGDGDYGKLGRG 3998
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 78/208 (37%), Gaps = 30/208 (14%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LAI + +W WG+ D G P + G V KV CGS+
Sbjct: 3970 SGDAQTLAITDDDCVWSWGD---GDYGKLGRGGSDGCKKPLRIESLIGMAVCKVECGSQF 4026
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL G+ Y+WG + +LG G + RP+ + + V G
Sbjct: 4027 SVALTKNGD--------LYTWGKGDYYRLGHGTNDHVRRPRKVACLQGKQ---IVTVAAG 4075
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T D E W G + GQLG+GT P V L + V L V C
Sbjct: 4076 SLHCVACT------DAGEVFTW--GDNDEGQLGNGTLNPIPEPTLVTVL-ENVKLNRVGC 4126
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
G H+ WS +G PN
Sbjct: 4127 GSAHSF-------AWSTEAPIDIGYMPN 4147
>gi|395527072|ref|XP_003765675.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Sarcophilus
harrisii]
Length = 4483
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 2799 VKKVAVHSGGRHAMALTVDGKIFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 2855
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2856 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2904
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 2905 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 2957
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG + + + + + G
Sbjct: 2958 GVCQIECGAQFSLALTKSGVVWTWG--KGDYFRLGHGTDVHVRKPQVVE----------G 3005
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3006 LRGKKI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3055
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3793 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 3849
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AG+ Y+WG G+LG GD E +L+PK++E +
Sbjct: 3850 IAAGGAHSACITAAGD--------LYTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 3898
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 3899 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 3949
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 3950 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 3997
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 3998 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4049
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 2828 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 2869
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 2870 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 2924
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2925 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2974
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 2975 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDTG 3028
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3029 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3074
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 2805
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 2806 SGGRHAMALTVDGKIF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 2854
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 2855 DIACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 2905
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 2906 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 2956
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2957 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGTDVHVRKPQVV 3003
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P +++ G + + A+
Sbjct: 3699 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVT 3755
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3756 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3806
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V + G H+
Sbjct: 3807 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHS 3857
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ +++AGD+++WG + L ++ D + P L+ G + D +ACG+
Sbjct: 3858 ACITAAGDLYTWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 3906
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3907 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3934
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 2959 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3015
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3016 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3064
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3065 RVACGSSHSVAWT 3077
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 3940 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 3996
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 3997 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4048
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4049 VAALQGKK---INRVACGSAHTLAWSTSKPAN 4077
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 3906 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 3962
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 3963 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 4011
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4012 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 4062
Query: 259 GLFHT 263
G HT
Sbjct: 4063 GSAHT 4067
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 91/209 (43%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3709 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLI----GGEQTLFAV-------TAD 3757
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 3758 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 3816
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ I + V +A G AH+ +T
Sbjct: 3817 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAAGGAHSACITAA 3863
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G L++WG+GR G LG G + D P +V
Sbjct: 3864 G-DLYTWGKGRYGRLGHGDSEDQLKPKLV 3891
Score = 46.6 bits (109), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 42/101 (41%), Gaps = 11/101 (10%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G +W WG+ D G TP + VVKV CGS+ VAL G+ Y
Sbjct: 409 GQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQFSVALTKDGQVY- 464
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
SWG +N +LG G E PK++E P A
Sbjct: 465 -------SWGKGDNQRLGHGTEEHVRYPKLLEGLQATLPQA 498
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 47/183 (25%), Positives = 77/183 (42%), Gaps = 45/183 (24%)
Query: 129 VVKVACGSEHVVALVSAG----ETYKGEDLV------------CYSWGANNNGQLGLGDR 172
+ ++AC + + L G + Y + LV +SWG + G+LG G
Sbjct: 368 ITQIACAEKRFLILSRNGRVYMQAYNSDTLVGVVAVFSLIFGQVWSWGDGDYGKLGRGGS 427
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ PK+IE QD V +V CGS + LT + +++G G+N +LGH
Sbjct: 428 DGCKTPKLIEKL-QD--LDVVKVRCGSQFSVALTK--------DGQVYSWGKGDNQRLGH 476
Query: 233 GTTQSALVPEQVK----ELPQ-------------YVYLVSVDCGLFHTSVVSSAGDVWSW 275
GT + P+ ++ LPQ ++V + CG + SS + WS
Sbjct: 477 GTEEHVRYPKLLEGLQATLPQANCLSKKXXXXLDTKHIVGIACGPAQSFAWSSCSE-WSI 535
Query: 276 GME 278
G+
Sbjct: 536 GLR 538
>gi|195399111|ref|XP_002058164.1| GJ15642 [Drosophila virilis]
gi|194150588|gb|EDW66272.1| GJ15642 [Drosophila virilis]
Length = 5062
Score = 99.0 bits (245), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 141/299 (47%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 3128 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRSTLDKPRLVEALRAK 3184
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +ACGS H A+ S GE Y +WG G+LG GD ++L+PK++ +
Sbjct: 3185 KIRDIACGSSHSAAISSQGELY--------TWGLGEYGRLGHGDNATQLKPKLVTALHGR 3236
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 3237 R---VIQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERL 3287
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ ++ ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 3288 -SGIGVIQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PIA- 3337
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3338 ------GLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3389
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P + +G +V
Sbjct: 4286 VKKVAVNSGGKHCLALTTDGEVYAWGEG---EDGKLGHGNRMSYDRPKLLEHLNGMSVAD 4342
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 4343 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEAL---LGYR 4391
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4392 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4444
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4445 GVIKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4493
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4494 -QGKKI---ISIATGSLHCVACSDAG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4542
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 104/205 (50%), Gaps = 32/205 (15%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRK 209
+D Y+ G NG+LGLG + P + +Q + V +V G H LT
Sbjct: 3095 QDGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQ---YVVKKVAVHSGGKHALALT--- 3148
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
L+ +++G GE+G+LGHG + P V+ L + + + CG H++ +SS
Sbjct: 3149 -----LDGKVFSWGEGEDGKLGHGNRSTLDKPRLVEAL-RAKKIRDIACGSSHSAAISSQ 3202
Query: 270 GDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
G++++WG+ E G LG NA+ + P L++ HG + +QVACG+ A
Sbjct: 3203 GELYTWGLGEYGRLGHGDNAT--------QLKPKLVTAL--HGRRV---IQVACGSRDAQ 3249
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTG 350
T+ +T+DG ++SWG G G LG G
Sbjct: 3250 TLALTEDG-AVFSWGDGDFGKLGRG 3273
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4427 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 4483
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA AGE Y+WG N+ GQLG G +
Sbjct: 4484 VRRPKKVAALQGKKIISIATGSLHCVACSDAGEV--------YTWGDNDEGQLGDGTVTA 4535
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4536 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4574
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 97/207 (46%), Gaps = 30/207 (14%)
Query: 159 WGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG N+ QLG G + S+++ P +T ++ P + GS +++ +
Sbjct: 3050 WGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFVVSQ--------DG 3097
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSWG 276
+ G G NG+LG G T + +P Q+ L QYV V+V G H ++ G V+SWG
Sbjct: 3098 KVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALTLDGKVFSWG 3157
Query: 277 M-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
E G LG ++L + +A+ K +D +ACG++H+ ++ G
Sbjct: 3158 EGEDGKLGHGNRSTLDKPRLVEAL----------RAKKIRD---IACGSSHSAAISSQG- 3203
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG G G LG G P +V
Sbjct: 3204 ELYTWGLGEYGRLGHGDNATQLKPKLV 3230
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 90/187 (48%), Gaps = 27/187 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YSWG ++ +LG GD +R P IE+ + V V CG ++A +T L
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLVRR----VQSVYCGCSYSAAIT--------LR 686
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSW 275
+T+G G G+LGHG + +P V L + L V++ G HT ++ G V++W
Sbjct: 687 GNLYTWGRGTYGRLGHGNSDDQCMPAMVMALKDHQVLDVALGSGDAHTLCLTRGGLVYAW 746
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G + G N S ++ P+LI P+ Q +V G+ ++ +T +G +
Sbjct: 747 G-DGDYGKLGNGS-----CNSSLQPLLIECL----PRVQ---RVFAGSQFSLALTCEG-Q 792
Query: 336 LWSWGRG 342
L+SWG+
Sbjct: 793 LYSWGKA 799
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS S P IE+ IG + ++ G SLA+ AG
Sbjct: 3268 GKLGRGGSEGSATPHEIERLSGIG------------------VIQIECGAQFSLALTRAG 3309
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+W WG D G P P+ G V+ VA G+ H +A+ AG+
Sbjct: 3310 EVWTWGKG---DYYRLGHGGDQHVRKPQPIAGLRGRRVIHVAVGALHCLAVTDAGQV--- 3363
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
Y+WG N++GQ G G+ +P ++ D+ + V V CGS H+
Sbjct: 3364 -----YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF-VNRVACGSSHS 3406
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 89/220 (40%), Gaps = 35/220 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTV 129
++ SV G S AI G L+ WG T G +S P+ V H V
Sbjct: 669 RVQSVYCGCSYSAAITLRGNLYTWGR------GTYGRLGHGNSDDQCMPAMVMALKDHQV 722
Query: 130 VKVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VA GS H + L G + Y+WG + G+LG G S L+P +IE +
Sbjct: 723 LDVALGSGDAHTLCLTRGG--------LVYAWGDGDYGKLGNGSCNSSLQPLLIECLPR- 773
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE--NGQLGHGTTQSALVPEQVK 245
V V GS + LT E +++G QL Q VP +
Sbjct: 774 ----VQRVFAGSQFSLALT--------CEGQLYSWGKASCLGHQLVERNVQGCSVPRLIT 821
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
L Q+ +V V G+ H +SS G+++ WG +CP
Sbjct: 822 SL-QHKRIVHVAVGVAHCLALSSNGEIFGWGRNDNQQICP 860
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G+G++ +LGHG + +P +++ L + V SV CG +++ ++ G++++WG +
Sbjct: 639 YSWGVGDSRRLGHGDCHARELPTKIESLVRRVQ--SVYCGCSYSAAITLRGNLYTWG--R 694
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G L + D P ++ H + D V + G AHT+ +T G +++W
Sbjct: 695 GT----YGRLGHGNSDDQCMPAMVMALKDH--QVLD-VALGSGDAHTLCLTRGGL-VYAW 746
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G G LG G P ++
Sbjct: 747 GDGDYGKLGNGSCNSSLQPLLI 768
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4202 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---IQLAGGEQSLFAVT----PDGKL 4253
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4254 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTDGEVY 4308
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4309 AWGEGEDGKLGHGNRMSYDRPKLLEHLNGMSVA-------------DIACGSAHSAAITA 4355
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4356 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4384
>gi|327268092|ref|XP_003218832.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Anolis
carolinensis]
Length = 4839
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE YSWG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAAITSSGE--------LYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3157 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3209
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG + + + + + G
Sbjct: 3210 GVCQIECGAQFSLALTKSGVVWTWG--KGDYFRLGHGTDVHVRKPQVVE----------G 3257
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 LRGKKI---IHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AG+ Y+WG G+LG GD E +L+PK++E +
Sbjct: 4101 IAAGGAHSACITAAGD--------LYTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4149
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4150 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4200
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
V +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4201 GVGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4248
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4249 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4300
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 116/240 (48%), Gaps = 38/240 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 485 PQLVQSLASRNIVKIAAHSDGHHYLALAATGEVF--------SWGCGDGGRLGHGDTVPL 536
Query: 176 LRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
PK+I + + + V + CGS ++A +T E +T+G G G+LGHG+
Sbjct: 537 EEPKMISALSGKQAGKHVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLGHGS 588
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
++ +P V L + + ++ V CG T V+ G VWSWG + G L R
Sbjct: 589 SEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KLGRG 641
Query: 293 EAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P LI K Q D V+V+CG+ +V +T DG +++SWG+G + LG G
Sbjct: 642 GSDGCKTPKLIE-------KLQDLDIVKVSCGSQFSVALTKDG-QVYSWGKGDNQRLGHG 693
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3121
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3122 GELYSWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3176
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3177 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3226
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + ++ V G H V+ G
Sbjct: 3227 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL-RGKKIIHVAVGALHCLAVTDTG 3280
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3281 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3326
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/354 (25%), Positives = 141/354 (39%), Gaps = 88/354 (24%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
EDD K N + ++ K G+ S+A +++WG L D GG PS
Sbjct: 2937 EDDDKANTGSLVR---KKTSGLESVATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2989
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYK-GE--------------------------- 152
VV+VA GS+ + A+ G+ Y GE
Sbjct: 2990 SETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATNGRLGLGLSSGTVPIPRQITALSNY 3049
Query: 153 -------------------DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
D +SWG ++G+LG R + +P++IE +
Sbjct: 3050 VVKKVAVHSGGRHAMALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3106
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +++GLGE G+LGHG + L P+ VK L + +
Sbjct: 3107 DIACGSSHSAAITS--------SGELYSWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3157
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3158 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3208
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3209 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3950 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4007 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4057
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V + G H+
Sbjct: 4058 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHS 4108
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ +++AGD+++WG + L ++ D + P L+ G + D +ACG+
Sbjct: 4109 ACITAAGDLYTWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 4157
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4158 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4185
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4185 GGSDGCKVPMKIDSLTGVGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDH 4241
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y+WG N+ GQLG G +
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNA 4293
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
RP+++ + V CGS HT + K N
Sbjct: 4294 IQRPRLVAALQGKK---INRVACGSAHTLAWSTSKPAN 4328
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 82/205 (40%), Gaps = 28/205 (13%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
S +G +LA+ G +W WG+ D G TP + +VKV+CG
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDIVKVSCG 666
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S+ VAL G+ YSWG +N +LG G E PK++E + V +V
Sbjct: 667 SQFSVALTKDGQV--------YSWGKGDNQRLGHGTEEHVRYPKLLEGLQGEK---VIDV 715
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYL 253
GS H LT E W G N Q H T P+ LP ++
Sbjct: 716 VAGSTHCLALTEDS------EVYSW----GSNDQCQHFDTLRITKPDPTA-LPGLDSKHI 764
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGME 278
V + CG + SS + WS G+
Sbjct: 765 VGIACGPAQSFAWSSCSE-WSIGLR 788
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGVGVVKVECGSQF 4213
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 4214 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 4262
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4263 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 4313
Query: 259 GLFHT 263
G HT
Sbjct: 4314 GSAHT 4318
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + L ++V + CG +++ +++ G++++WG
Sbjct: 518 FSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D V+CG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDQTIPMLVTG--LKGLKVID---VSCGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3960 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3997
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3998 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4056
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V +A
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAA 4103
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ +T G L++WG+GR G LG G + D P +V
Sbjct: 4104 GGAHSACITAAG-DLYTWGKGRYGRLGHGDSEDQLKPKLV 4142
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 10/140 (7%)
Query: 224 LGENGQLGHGTTQSALV-PEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ S ++ P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDILGPQLVQSLASRNIVKIAAHSDGHHYLALAATGEVFSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS + G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKMISALSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDQTIPMLV 598
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + P+ V G + +V
Sbjct: 3262 KIIHVAVGALHCLAVTDTGQVYAWGDN---DHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3318
Query: 133 ACGSEHVVA 141
ACGS H V+
Sbjct: 3319 ACGSSHSVS 3327
>gi|356991167|ref|NP_001239305.1| E3 ubiquitin-protein ligase HERC2 [Gallus gallus]
Length = 4839
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKIFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3157 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3209
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG + + + + + G
Sbjct: 3210 GVCQIECGAQFSLALTKSGVVWTWG--KGDYFRLGHGTDVHVRKPQVVE----------G 3257
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 LRGKKI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AG+ ++WG G+LG GD E +L+PK++E +
Sbjct: 4101 IAAGGAHSACITAAGD--------LFTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4149
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4150 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTD 4201
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4202 -LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4248
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4249 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4300
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3121
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3122 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3176
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3177 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3226
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 3227 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDTG 3280
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3281 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3326
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I + + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG ++++WG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3058 SGGRHAMALTVDGKIF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3106
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3107 DIACGSSHSAAITS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3157
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3158 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3208
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3209 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRG---NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS +A+ G+ + SWG + G+LG G + PK+IE QD
Sbjct: 611 CGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLIEKL-QD--LD 659
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS + LT + +T+G G+N +LGHGT + P+ ++ L +
Sbjct: 660 IVKVRCGSQFSIALTK--------DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL-KGK 710
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
++ V G H ++ +V SWG
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3950 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4007 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4057
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V + G H+
Sbjct: 4058 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHS 4108
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ +++AGD+++WG + L ++ D + P L+ G + D +ACG+
Sbjct: 4109 ACITAAGDLFTWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 4157
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4158 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4185
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 64/158 (40%), Gaps = 14/158 (8%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 4185 GGSDGCKVPMKIDSLTDLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDH 4241
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y+WG N+ GQLG G +
Sbjct: 4242 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNA 4293
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
RP+++ + V CGS HT + K N
Sbjct: 4294 IQRPRLVAALQGKK---INRVACGSAHTLAWSTSKPAN 4328
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 44/238 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV++AC + + L G Y A N+ LG P+++++ +
Sbjct: 454 VVQIACAEKRFLILSRNGRVYTQ---------AYNSDTLG---------PQLVQSLASRN 495
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + G + AL + + +++G G+ G+LGHG T P+ + L
Sbjct: 496 IVKIAAHSDGHHYLALSANGE---------VFSWGCGDGGRLGHGDTVPLEEPKLISALS 546
Query: 249 QYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
++V + CG +++ +++ G++++WG L + D P+L++G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN------YGRLGHGSSEDQTIPMLVTG 600
Query: 306 NGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K D V+CG+ A T+ VT++G ++WSWG G G LG G + P ++
Sbjct: 601 --LKGLKVID---VSCGSGDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + VVKV CGS+
Sbjct: 4157 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTDLGVVKVECGSQF 4213
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 4214 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 4262
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4263 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 4313
Query: 259 GLFHT 263
G HT
Sbjct: 4314 GSAHT 4318
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3960 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3997
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3998 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4056
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V +A
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAA 4103
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ +T G L++WG+GR G LG G + D P +V
Sbjct: 4104 GGAHSACITAAG-DLFTWGKGRYGRLGHGDSEDQLKPKLV 4142
>gi|326913714|ref|XP_003203179.1| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Meleagris
gallopavo]
Length = 4815
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3027 VKKVAVHSGGRHAMALTVDGKIFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3083
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3084 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3132
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3133 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3185
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG + + + + + G
Sbjct: 3186 GVCQIECGAQFSLALTKSGVVWTWG--KGDYFRLGHGTDVHVRKPQVVE----------G 3233
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3234 LRGKKI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3283
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4020 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4076
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AG+ ++WG G+LG GD E +L+PK++E +
Sbjct: 4077 IAAGGAHSACITAAGD--------LFTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4125
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4126 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4176
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4177 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4224
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4225 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4276
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3056 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3097
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3098 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3152
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3153 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3202
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 3203 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDTG 3256
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3257 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3302
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 458 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDT 509
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I + + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 510 VPLEEPKLISALSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 561
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 562 HGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 614
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG ++++WG+G + L
Sbjct: 615 GRGGSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRL 666
Query: 348 GTG 350
G G
Sbjct: 667 GHG 669
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2978 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3033
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3034 SGGRHAMALTVDGKIF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3082
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3083 DIACGSSHSAAITS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3133
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3134 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3184
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3185 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGTDVHVRKPQVV 3231
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 530 VVHIACGSTYSAAITAEGELYTWGRG---NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 586
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS +A+ G+ + SWG + G+LG G + PK+IE QD
Sbjct: 587 CGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLIEKL-QD--LD 635
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS + LT + +T+G G+N +LGHGT + P+ ++ L +
Sbjct: 636 IVKVRCGSQFSIALTK--------DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL-KGK 686
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
++ V G H ++ +V SWG
Sbjct: 687 KVIDVAAGSTHCLALTEDSEVHSWG 711
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3187 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3243
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3244 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3292
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3293 RVACGSSHSVAWT 3305
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3926 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3982
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3983 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4033
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V + G H+
Sbjct: 4034 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHS 4084
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ +++AGD+++WG + L ++ D + P L+ G + D +ACG+
Sbjct: 4085 ACITAAGDLFTWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 4133
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4134 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4161
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4167 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4223
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4224 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4275
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4276 VAALQGKK---INRVACGSAHTLAWSTSKPAN 4304
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 44/238 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV++AC + + L G Y A N+ LG P+++++ +
Sbjct: 430 VVQIACAEKRFLILSRNGRVYTQ---------AYNSDTLG---------PQLVQSLASRN 471
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + G + AL + + +++G G+ G+LGHG T P+ + L
Sbjct: 472 IVKIAAHSDGHHYLALSANGE---------VFSWGCGDGGRLGHGDTVPLEEPKLISALS 522
Query: 249 QYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
++V + CG +++ +++ G++++WG L + D P+L++G
Sbjct: 523 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN------YGRLGHGSSEDQTIPMLVTG 576
Query: 306 NGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K D V+CG+ A T+ VT++G ++WSWG G G LG G + P ++
Sbjct: 577 L--KGLKVID---VSCGSGDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLI 628
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 4133 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 4189
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 4190 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 4238
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4239 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 4289
Query: 259 GLFHT 263
G HT
Sbjct: 4290 GSAHT 4294
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 93/220 (42%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3936 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3973
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3974 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4032
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V +A
Sbjct: 4033 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAA 4079
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ +T G L++WG+GR G LG G + D P +V
Sbjct: 4080 GGAHSACITAAG-DLFTWGKGRYGRLGHGDSEDQLKPKLV 4118
>gi|296203907|ref|XP_002806938.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Callithrix jacchus]
Length = 4774
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2987 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3043
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3044 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3092
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ VP+ ++ L
Sbjct: 3093 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL-NGQ 3145
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3146 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3197
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3198 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3243
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G S P + G VV
Sbjct: 3979 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGSRSPCDRPRVIESLRGVEVVD 4035
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4036 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4084
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4085 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4135
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4136 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4183
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4184 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4235
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3016 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3057
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3058 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3112
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3113 ----LVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3162
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3163 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3216
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3217 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3262
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2938 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYMVKKVA 2991
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 2992 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3040
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3041 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3091
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3092 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQN---------IERL 3142
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3143 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3191
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 412 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 463
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G +L
Sbjct: 464 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYXRLD 515
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS--SAGDVWSWGMEKGLGLCPNASL 289
HG + + + L + ++ CG+ ++ G VWSWG + G L
Sbjct: 516 HGRSAMNEILIMISGLDRQKFIYK-SCGIRFAQTLAFYENGQVWSWG-DGDYG-----KL 568
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 569 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 620
Query: 348 GTG 350
G G
Sbjct: 621 GHG 623
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4031 VEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4084
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4085 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4135
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4136 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4186
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4187 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA- 4237
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4238 -LQGKKVN---RVACGSAHTL 4254
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 120/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3885 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3941
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3942 ADGK--------LYATGYGAGGRLGIGGTESVSSPTLLESI-QHVFIKKVAVNSGGKHCL 3992
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG+ P ++ L + V +V V G H+
Sbjct: 3993 ALSS--------EGEVYSWGEAEDGKLGHGSRSPCDRPRVIESL-RGVEVVDVAAGGAHS 4043
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4044 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4092
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4093 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4120
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3147 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3203
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3204 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3252
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3253 RVACGSSHSVAWT 3265
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 80/208 (38%), Gaps = 30/208 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K C ++ +LA G +W WG+ D G TP + VVKV
Sbjct: 539 KSCGIRFA--QTLAFYENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKV 593
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CGS+ +AL G+ Y SWG +N +LG G E PK++E V
Sbjct: 594 RCGSQFSIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---V 642
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QY 250
+V GS H LT E W G N Q H T PE LP
Sbjct: 643 IDVAAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDT 691
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGME 278
++V + CG + SS + WS G+
Sbjct: 692 KHIVGIACGPAQSFAWSSCSE-WSIGLR 718
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 74/148 (50%), Gaps = 19/148 (12%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 448 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 507
Query: 277 MEKGLGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDG 333
+ R + G A++ ILI +G KF + +CG A T+ ++G
Sbjct: 508 ---------RGNYXRLDHGRSAMNEILIMISGLDRQKF---IYKSCGIRFAQTLAFYENG 555
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 556 -QVWSWGDGDYGKLGRGGSDGCKTPKLI 582
>gi|431917309|gb|ELK16842.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 3660
Score = 99.0 bits (245), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 131/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS + P + +
Sbjct: 1882 VKKVAVHSGGRHATALTADGKVFSWGEG---DDGKLGHFSRXNCDKPRLIEALKSRRIRD 1938
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 1939 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGHR--- 1987
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ VP+ ++ L
Sbjct: 1988 VVQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL-NGQ 2040
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2041 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 2092
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 2093 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 2138
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 128/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 2875 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 2931
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG Y+WG G+LG D E +L+PK++E
Sbjct: 2932 VAAGGAHSACVTAAGG--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 2980
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP +V L
Sbjct: 2981 VVDVACGSGDAQTLCLTE--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKVDAL-T 3031
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 3032 GLGAVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 3079
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 3080 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 3131
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 89/296 (30%), Positives = 132/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L VSS T P V + V KVA
Sbjct: 1833 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGVSSGTVPVPRQVTALSSYVVKKVA 1886
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL + G+ + SWG ++G+LG R + +P++IE
Sbjct: 1887 VHSGGRHATALTADGKVF--------SWGEGDDGKLGHFSRXNCDKPRLIEALKSRR--- 1935
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 1936 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLVGH- 1986
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
+V V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 1987 RVVQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQN---------IERL 2037
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2038 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2086
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE + +I + G S A+ ++
Sbjct: 1911 DGKLGHFSRXNCDKPRLIEALKSR------------------RIRDIACGSSHSAALTSS 1952
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH VV+VACGS L E
Sbjct: 1953 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLVGHRVVQVACGSRDAQTLALTDEG-- 2007
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2008 ----LVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2057
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 2058 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 2111
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 2112 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 2157
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 2927 IEVVDVAAGGAHSACVTAAGGLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 2980
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L ED +SWG + G+LG G + P ++ +
Sbjct: 2981 VVDVACGSGDAQTLCLT------EDDTVWSWGDGDYGKLGRGGSDGCKVPMKVDAL---T 3031
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 3032 GLGAVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 3082
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 3083 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 3134
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 3135 --QGKKVN---RVACGSAHTL 3150
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2042 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2098
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 2099 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2147
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 2148 RVACGSSHSVAWT 2160
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 68/171 (39%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS+ VP ++ +GA V+ G S+A+ +G
Sbjct: 3011 GKLGRGGSDGCKVPMKVDALTGLGA------------------VKVECGSQFSVALTKSG 3052
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
A++ WG D G S P V G V+ +A GS H V GE
Sbjct: 3053 AVYTWGKG---DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--- 3106
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
Y+WG N+ GQLG G + RP+++ V V CGS HT
Sbjct: 3107 -----YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VNRVACGSAHT 3149
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 117/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P ++ G + + A+
Sbjct: 2781 TLSAGGSGTVYGWGH---NHRGQLGGVEGAKVKVPTPCEALAALRPAQLIGGEQTLFAVT 2837
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 2838 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 2888
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 2889 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 2939
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AG +++WG + L +++ D + P L+ H V VACG+
Sbjct: 2940 ACVTAAGGLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 2988
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +T+D +WSWG G G LG G
Sbjct: 2989 GDAQTLCLTEDD-TVWSWGDGDYGKLGRG 3016
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 2791 YGWGHNHRGQLGGVEGAKVKVPTPCEALAALRPAQLI----GGEQTLFAV-------TAD 2839
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 2840 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 2898
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ I + V VA G AH+ VT
Sbjct: 2899 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAA 2945
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G L++WG+GR G LG + D P +V
Sbjct: 2946 G-GLYTWGKGRYGRLGHSDSEDQLKPKLV 2973
>gi|198471444|ref|XP_001355626.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
gi|198145920|gb|EAL32685.2| GA11166 [Drosophila pseudoobscura pseudoobscura]
Length = 5072
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 37/297 (12%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 3178 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVETLRSK 3234
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VACGS H A+ S GE Y+WG G+LG GD ++L+PK++
Sbjct: 3235 KIRDVACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNSTQLKPKLVAALAGR 3286
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 3287 R---VIQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 3337
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD--AISPILISG 305
+ ++ ++CG + ++ AG+VW+WG L GD P I+G
Sbjct: 3338 -SGIGVIQIECGAQFSLALTRAGEVWTWGKGDYYRL--------GHGGDQHVRKPQPIAG 3388
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3389 L-----RGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3439
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G V
Sbjct: 4323 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMNVAD 4379
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRP+++E +
Sbjct: 4380 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPQLVEALLG---YR 4428
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4429 AIDIACGSGDAQTLCINDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4481
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4482 GVIKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4530
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4531 -QGKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4579
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/286 (27%), Positives = 129/286 (45%), Gaps = 49/286 (17%)
Query: 79 AGGMMSLAIDN--AGAL--------WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AGG +SL D+ AGAL +WG L D GG P+
Sbjct: 3073 AGGSVSLHGDHGMAGALDQDLPCTVMVWG---LNDKEQLGGLKGSKVKVPTFSQTISRLR 3129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +A GS+ + + G++ Y+ G NG+LGLG + P + +Q
Sbjct: 3130 PIHIAGGSKSLFIV--------GQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQ-- 3179
Query: 189 PWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +V G H LT L+ +++G GE+G+LGHG + P V+
Sbjct: 3180 -YVVKKVAVHSGGKHALALT--------LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVET 3230
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L + + V CG H++ +SS G++++WG+ + L + + P L++
Sbjct: 3231 L-RSKKIRDVACGSSHSAAISSQGELYTWGLGE------YGRLGHGDNSTQLKPKLVAAL 3283
Query: 307 GPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
G + +QVACG+ A T+ +T+DG ++SWG G G LG G
Sbjct: 3284 A--GRRV---IQVACGSRDAQTLALTEDG-AVFSWGDGDFGKLGRG 3323
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4464 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 4520
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 4521 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 4572
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4573 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4611
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 90/187 (48%), Gaps = 27/187 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YSWG + +LG GD +R P I ++ V V CG ++A +T
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKITLLDR----CVKAVFCGCSYSAAIT--------CS 689
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSW 275
+T+G G +LGHG + +P V L ++ + V++ G H+ ++S G V++W
Sbjct: 690 GNLYTWGRGTYARLGHGNSDDQPLPTVVMALTEHEIIDVALGSGDAHSLCLTSEGHVYAW 749
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G + G N +L ++SP+L+ PK Q +V GA ++ +T DG +
Sbjct: 750 G-DADYGKLGNGNLN-----GSMSPVLVESL----PKVQ---RVFAGAQFSMALTTDG-Q 795
Query: 336 LWSWGRG 342
L+SWG+
Sbjct: 796 LYSWGKA 802
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS ++
Sbjct: 3091 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVGQN 3146
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3147 GK--------VYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3198
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + + + K +D VACG++H
Sbjct: 3199 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETL----------RSKKIRD---VACGSSH 3245
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 3246 SAAISSQG-ELYTWGLGEYGRLGHGDNSTQLKPKLV 3280
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 3340 IGVIQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIAGLRGRRVIH 3396
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ +
Sbjct: 3397 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF- 3445
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 3446 VNRVACGSSHS 3456
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 73/142 (51%), Gaps = 12/142 (8%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE+ +LGHG T + VP ++ L + V +V CG +++ ++ +G++++WG
Sbjct: 642 YSWGNGEDHRLGHGDTHARAVPTKITLLDRCVK--AVFCGCSYSAAITCSGNLYTWGRGT 699
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
A L + D P ++ H + D V + G AH++ +T +G+ +++W
Sbjct: 700 ------YARLGHGNSDDQPLPTVVMALTEH--EIID-VALGSGDAHSLCLTSEGH-VYAW 749
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G +P +V
Sbjct: 750 GDADYGKLGNGNLNGSMSPVLV 771
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 92/217 (42%), Gaps = 27/217 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V G S AI +G L+ WG + G + P+ V H ++ VA
Sbjct: 673 VKAVFCGCSYSAAITCSGNLYTWGRG---TYARLGHGNSDDQPLPTVVMALTEHEIIDVA 729
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
GS H + L S G Y +WG + G+LG G+ + P ++E+ +
Sbjct: 730 LGSGDAHSLCLTSEGHVY--------AWGDADYGKLGNGNLNGSMSPVLVESLPK----- 776
Query: 192 VYEVTCGS-FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V G+ F AL T + L S LG QL + Q VP + L Q+
Sbjct: 777 VQRVFAGAQFSMALTT-----DGQLYSWGKASCLGH--QLVERSAQWCSVPRLISGL-QH 828
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
+V V G+ H +SS G+V+ WG +CP++
Sbjct: 829 KRIVDVAVGVAHCLALSSCGEVFGWGRNDSQQICPSS 865
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4239 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4290
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4291 ----FATGYGSGGRLGVGGADSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4345
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4346 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVA-------------DIACGSAHSAAITA 4392
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4393 SGHVL-TWGKGRYGRLGHGDSEDQLRPQLV 4421
>gi|403306428|ref|XP_003943737.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Saimiri boliviensis
boliviensis]
Length = 4472
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2685 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 2741
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2742 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2790
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ VP+ ++ L
Sbjct: 2791 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL-NGQ 2843
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2844 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 2895
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 2896 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 2941
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G S P + G VV
Sbjct: 3677 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGSRSPCDRPRVIESLRGIEVVD 3733
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 3734 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 3782
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 3783 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSL-T 3833
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 3834 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 3881
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 3882 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 3933
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 170 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 221
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 222 VPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 273
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 274 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 326
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 327 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 378
Query: 348 GTG 350
G G
Sbjct: 379 GHG 381
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 2714 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 2755
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 2756 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 2810
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2811 ----LVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2860
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 2861 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 2914
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 2915 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 2960
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G L S P P + + V KVA
Sbjct: 2636 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGLSSGTVPIPRQITALSSYMVKKVAVH 2691
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 2692 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 2740
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 2741 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 2791
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 2792 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQN---------IERLNG 2842
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2843 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2889
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 3729 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 3782
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 3783 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPTKIDSL---T 3833
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 3834 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 3884
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 3885 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 3936
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 3937 --QGKKVN---RVACGSAHTL 3952
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3583 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3639
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3640 ADGK--------LYATGYGAGGRLGIGGTESVSSPTLLESI-QHVFIKKVAVNSGGKHCL 3690
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG+ P ++ L + + +V V G H+
Sbjct: 3691 ALSS--------EGEVYSWGEAEDGKLGHGSRSPCDRPRVIESL-RGIEVVDVAAGGAHS 3741
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 3742 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 3790
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3791 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3818
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2845 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2901
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 2902 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2950
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 2951 RVACGSSHSVAWT 2963
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 301 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 357
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 358 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 406
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 407 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 455
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 456 ACGPAQSFAWSSCSE-WSIGLR 476
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 206 YSWGCGDGGRLGHGDTVPLEEPKAISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 265
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 266 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 313
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 314 QVWSWGDGDYGKLGRGGSDGCKTPKLI 340
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 9/124 (7%)
Query: 239 LVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
L P+ V+ L + + ++ H +++ G+V+SWG G G + E A
Sbjct: 171 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPKA 229
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
IS G H V +ACG+ ++ +T +G +L++WGRG G LG G + D
Sbjct: 230 ISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGRGNYGRLGHGSSEDEAI 282
Query: 358 PAIV 361
P +V
Sbjct: 283 PMLV 286
>gi|410048912|ref|XP_003952667.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pan troglodytes]
Length = 4776
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3040 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3096
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3097 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3145
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3146 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3198
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3199 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3250
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3251 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3296
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3981 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4037
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4038 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4086
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4087 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4137
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4138 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4185
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4186 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4237
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3069 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3110
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3111 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3165
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3166 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3215
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3216 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3269
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3270 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3315
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2991 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3044
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3045 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3093
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3094 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3144
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3145 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3195
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3196 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3244
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4033 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4086
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4087 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4137
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4138 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4188
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4189 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4240
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4241 --QGKKVN---RVACGSAHTL 4256
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3200 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3256
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3257 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3305
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3306 RVACGSSHSVAWT 3318
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 84/180 (46%), Gaps = 24/180 (13%)
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
ES P ++E+ Q V G H L+ E +++G E+G+LGH
Sbjct: 3965 ESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSS--------EGEVYSWGEAEDGKLGH 4015
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G P ++ L + + +V V G H++ V++AGD+++WG + L +
Sbjct: 4016 GNRSPCDRPRVIESL-RGIEVVDVAAGGAHSACVTAAGDLYTWGKGR------YGRLGHS 4068
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
++ D + P L+ H V +ACG+ A T+ +TDD +WSWG G G LG G
Sbjct: 4069 DSEDQLKPKLVEALQGH-----RVVDIACGSGDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4122
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4128 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4184
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4185 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4236
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4237 VAALQGKK---VNRVACGSAHT 4255
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 235 TQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASLT 290
T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E G LG +
Sbjct: 3964 TESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD 4022
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R +++ I + V VA G AH+ VT G L++WG+GR G LG
Sbjct: 4023 RPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYTWGKGRYGRLGHS 4068
Query: 351 KTIDFFAPAIV 361
+ D P +V
Sbjct: 4069 DSEDQLKPKLV 4079
Score = 45.8 bits (107), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|301117316|ref|XP_002906386.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107735|gb|EEY65787.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 419
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/294 (29%), Positives = 137/294 (46%), Gaps = 53/294 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHG 126
+++ + GG S A+ G L++WG LP E + P P + G
Sbjct: 103 LEVDYISCGGCHSAAVTKDGTLYVWGESHWGQLGLP-KEYEAAHESLPVKCPMPEGEA-G 160
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-------DRESRL--- 176
T+VKV+CG H AL S G Y WG ++GQLG+G + ES +
Sbjct: 161 ETIVKVSCGGTHTAALTSFGRV--------YVWGRGDSGQLGIGSVWMKDPENESLMGAS 212
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
RP +++ FN + V +V CG+FH+A +T + + +G + G LG G +
Sbjct: 213 RPHLLKAFNGEK---VVQVACGAFHSAAVTE--------QGHVYVWGKEDYGMLGVGQSS 261
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEA 294
+P++++ + ++ V CG +HT VV+ +GD +++G E G LGL S TR
Sbjct: 262 DQQIPKRLEYFDD-IPVLRVSCGGWHTVVVAKSGDCYAFGRGEYGRLGLGDTKSRTRPHL 320
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
A+ K + +Q ACG +HT+ VT DG + GR G LG
Sbjct: 321 VKAL-------------KGKTVIQAACGGSHTLFVTSDG-TAYVAGRPDHGRLG 360
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 116/248 (46%), Gaps = 20/248 (8%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+S P + + +V V+CGS H +AL S+G YSWG + GQLG GD +
Sbjct: 36 ASNFPQQIGNLPDEDIVAVSCGSRHTMALTSSG--------AVYSWGWGSMGQLGHGDLK 87
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P+ I F Q+ Y ++CG H+A +T ES GL + + H
Sbjct: 88 IINEPQKIAFFEQERLEVDY-ISCGGCHSAAVTKDGTLYVWGESHWGQLGLPKEYEAAH- 145
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+S V + E +V V CG HT+ ++S G V+ WG L + ++
Sbjct: 146 --ESLPVKCPMPEGEAGETIVKVSCGGTHTAALTSFGRVYVWGRGDSGQLGIGSVWMKDP 203
Query: 294 AGDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
++ L+ + PH K + VQVACGA H+ VT+ G+ ++ WG+ G+LG G
Sbjct: 204 ENES----LMGASRPHLLKAFNGEKVVQVACGAFHSAAVTEQGH-VYVWGKEDYGMLGVG 258
Query: 351 KTIDFFAP 358
++ D P
Sbjct: 259 QSSDQQIP 266
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 94/363 (25%), Positives = 148/363 (40%), Gaps = 76/363 (20%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMS 84
T+ C DGQLG +G+ I+ P + + + I +V G +
Sbjct: 9 TAFGCNDDGQLG-TGAKRRPTLAIDDVSASNFPQQIGNLPDED------IVAVSCGSRHT 61
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
+A+ ++GA++ WG + G +++ ++ V ++CG H A+
Sbjct: 62 MALTSSGAVYSWGWGSM-GQLGHGDLKIINEPQKIAFFEQERLEVDYISCGGCHSAAVT- 119
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW-----------AVY 193
+D Y WG ++ GQLGL PK E ++ P +
Sbjct: 120 -------KDGTLYVWGESHWGQLGL--------PKEYEAAHESLPVKCPMPEGEAGETIV 164
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT----------QSALVPEQ 243
+V+CG HTA LT R + +G G++GQLG G+ A P
Sbjct: 165 KVSCGGTHTAALTSFGR--------VYVWGRGDSGQLGIGSVWMKDPENESLMGASRPHL 216
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL-TRNEAGDAI 298
+K +V V CG FH++ V+ G V+ WG E G+G + + R E D I
Sbjct: 217 LKAF-NGEKVVQVACGAFHSAAVTEQGHVYVWGKEDYGMLGVGQSSDQQIPKRLEYFDDI 275
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P+L +V+CG HTV+V G +++GRG G LG G T P
Sbjct: 276 -PVL---------------RVSCGGWHTVVVAKSG-DCYAFGRGEYGRLGLGDTKSRTRP 318
Query: 359 AIV 361
+V
Sbjct: 319 HLV 321
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 34/212 (16%)
Query: 153 DLVCYSWGANNNGQLGLGDRE-----------SRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ V ++G N++GQLG G + S +I ++D + V+CGS H
Sbjct: 5 ECVVTAFGCNDDGQLGTGAKRRPTLAIDDVSASNFPQQIGNLPDED----IVAVSCGSRH 60
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS-VDCGL 260
T LT +++G G GQLGHG + P+++ Q V + CG
Sbjct: 61 TMALTS--------SGAVYSWGWGSMGQLGHGDLKIINEPQKIAFFEQERLEVDYISCGG 112
Query: 261 FHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
H++ V+ G ++ WG LGL P +E+ P+ P G + V+
Sbjct: 113 CHSAAVTKDGTLYVWGESHWGQLGL-PKEYEAAHESLPVKCPM------PEGEAGETIVK 165
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
V+CG HT +T G +++ WGRG SG LG G
Sbjct: 166 VSCGGTHTAALTSFG-RVYVWGRGDSGQLGIG 196
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 82/196 (41%), Gaps = 26/196 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G S A+ G +++WG D G P + F V++V
Sbjct: 224 KVVQVACGAFHSAAVTEQGHVYVWGK---EDYGMLGVGQSSDQQIPKRLEYFDDIPVLRV 280
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG H V + +G+ CY++G G+LGLGD +SR RP +++ + V
Sbjct: 281 SCGGWHTVVVAKSGD--------CYAFGRGEYGRLGLGDTKSRTRPHLVKALKGKT---V 329
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG HT +T + + G ++G+LG ++ VP ++ P V
Sbjct: 330 IQAACGGSHTLFVTS--------DGTAYVAGRPDHGRLGLADMKALGVPTRLDLGPIPVR 381
Query: 253 LVSV----DCGLFHTS 264
S L H+S
Sbjct: 382 QFSAGGAHSVALMHSS 397
>gi|410265950|gb|JAA20941.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|195482069|ref|XP_002101897.1| GE17877 [Drosophila yakuba]
gi|194189421|gb|EDX03005.1| GE17877 [Drosophila yakuba]
Length = 2660
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 815 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVEALRAK 871
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VACGS H A+ S GE Y+WG G+LG GD ++L+PK++
Sbjct: 872 KIRDVACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNATQLKPKLVTALAGR 923
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 924 R---VVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 974
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ +V ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 975 -SGIGVVQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI-- 1023
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 1024 -----GGLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 1076
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G +V
Sbjct: 1884 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMSVAD 1940
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 1941 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEALLG---YR 1989
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 1990 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 2042
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 2043 GVVKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 2091
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 2092 -QGKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 2140
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 103/392 (26%), Positives = 154/392 (39%), Gaps = 68/392 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G S AI + G L+ WG L + G + P V G VV+V
Sbjct: 872 KIRDVACGSSHSAAISSQGELYTWG---LGEYGRLGHGDNATQLKPKLVTALAGRRVVQV 928
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L ED +SWG + G+LG G E P IE S V
Sbjct: 929 ACGSRDAQTLALT------EDGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL---SGIGV 979
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT R ++ WT+G G+ +LGHG Q P+ + L +
Sbjct: 980 VQIECGAQFSLALT---RAGEV-----WTWGKGDYYRLGHGGDQHVRKPQPIGGL-RGRR 1030
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG-MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ V G H V+ AG V++WG + G N + + P L+ G
Sbjct: 1031 VIHVAVGALHCLAVTDAGQVYAWGDNDHGQQGSGNTFVNKK-------PALVIG------ 1077
Query: 312 KFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI--VLWPPL 366
D V +VACG++H++ G S + G + G T D + +
Sbjct: 1078 --LDAVFVNRVACGSSHSIAW---GLPNASTDEEKRGPVPFGSTRDPLGGSSLGIYEAET 1132
Query: 367 TEEFKQDE--LNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQ------------SK 412
+ KQ+ LN L + + LE R L + M +LQ SK
Sbjct: 1133 VQTLKQEAKPLNQSSLSESLA---LETPAARQAALGHVLRAMSILQARQLIVAALTSHSK 1189
Query: 413 LSVMERYAS------ILHGSIFGKPFAAEQDI 438
++ ER A+ ++ G + G P + I
Sbjct: 1190 VNFKERGAAGGEEDQLIGGPMMGAPLQLAETI 1221
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 2025 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 2081
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 2082 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 2133
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 2134 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 2172
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 728 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQ- 782
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 783 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 835
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 836 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 882
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 883 SAAISSQG-ELYTWGLGEYGRLGHGDNATQLKPKLV 917
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 977 IGVVQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIH 1033
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ +
Sbjct: 1034 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF- 1082
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 1083 VNRVACGSSHS 1093
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 1800 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 1851
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 1852 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 1906
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 1907 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-------------DIACGSAHSAAITA 1953
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 1954 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 1982
>gi|410265952|gb|JAA20942.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|410223232|gb|JAA08835.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304314|gb|JAA30757.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 98.6 bits (244), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|410349247|gb|JAA41227.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.8 bits (107), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|126032348|ref|NP_004658.3| E3 ubiquitin-protein ligase HERC2 [Homo sapiens]
gi|308153453|sp|O95714.2|HERC2_HUMAN RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4834
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.4 bits (106), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|224043006|ref|XP_002197493.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Taeniopygia guttata]
Length = 4839
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3157 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3209
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG + + + + + G
Sbjct: 3210 GVCQIECGAQFSLALTKSGVVWTWG--KGDYFRLGHGTDVHVRKPQVVE----------G 3257
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 LRGKKI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ G ++ WG + G + P + G VV
Sbjct: 4044 IKKVAVNSGGKHCLALSFEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AG+ ++WG G+LG GD E +L+PK++E +
Sbjct: 4101 IAAGGAHSACITAAGD--------LFTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4149
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4150 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4200
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4201 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4248
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4249 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4300
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3121
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3122 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3176
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3177 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3226
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 3227 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDTG 3280
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3281 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3326
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I + + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG ++++WG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3058 SGGRHAMALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3106
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3107 DIACGSSHSAAITS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3157
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3158 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3208
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3209 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 109/258 (42%), Gaps = 36/258 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I++ + AGG S I AG L+ WG G P V G+ V+
Sbjct: 4096 IEVVDIAAGGAHSACITAAGDLFTWGKGRY---GRLGHGDSEDQLKPKLVEALQGYRVID 4152
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4153 IACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLG 4203
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4204 VVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-QGK 4254
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4255 KVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL--Q 4304
Query: 310 GPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4305 GKKIN---RVACGSAHTL 4319
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRG---NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS +A+ G+ + SWG + G+LG G + PK+IE QD
Sbjct: 611 CGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLIEKL-QD--LD 659
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS + LT + +T+G G+N +LGHGT + P+ ++ L +
Sbjct: 660 IVKVRCGSQFSIALTK--------DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL-KGK 710
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
++ V G H ++ +V SWG
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3950 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4007 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4057
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V + G H+
Sbjct: 4058 ALS--------FEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDIAAGGAHS 4108
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ +++AGD+++WG + L ++ D + P L+ G + D +ACG+
Sbjct: 4109 ACITAAGDLFTWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 4157
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4158 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4185
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4247
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4248 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4299
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4300 VAALQGKK---INRVACGSAHTLAWSTSKPAN 4328
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/238 (23%), Positives = 107/238 (44%), Gaps = 44/238 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VAC + + L G Y A N+ LG P+++++ +
Sbjct: 454 VMQVACAEKRFLILSRNGRVYTQ---------AYNSDTLG---------PQLVQSLASRN 495
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + G + AL + + +++G G+ G+LGHG T P+ + L
Sbjct: 496 IVKIAAHSDGHHYLALSANGE---------VFSWGCGDGGRLGHGDTVPLEEPKMISALS 546
Query: 249 QYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
++V + CG +++ +++ G++++WG L + D P+L++G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN------YGRLGHGSSEDQTIPMLVTG 600
Query: 306 NGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K D V+CG+ A T+ VT++G ++WSWG G G LG G + P ++
Sbjct: 601 L--KGLKVID---VSCGSGDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3960 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3997
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3998 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4056
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+S G+V+SWG E G LG + R +++ I + V +A
Sbjct: 4057 LALSFEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDIAA 4103
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ +T G L++WG+GR G LG G + D P +V
Sbjct: 4104 GGAHSACITAAG-DLFTWGKGRYGRLGHGDSEDQLKPKLV 4142
>gi|157821067|ref|NP_001100990.1| E3 ubiquitin-protein ligase HERC2 [Rattus norvegicus]
gi|149031474|gb|EDL86454.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2 (predicted) [Rattus
norvegicus]
Length = 4779
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2991 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3047
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3048 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3096
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3097 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3149
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3150 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3201
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3202 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3247
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3984 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4040
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4041 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4089
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4090 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4140
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4141 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4188
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4189 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4240
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 428 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 479
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 480 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 531
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 532 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 584
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 585 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 636
Query: 349 TG 350
G
Sbjct: 637 HG 638
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3020 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3061
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3062 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3116
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3117 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3166
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3167 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3220
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3221 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3266
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2942 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2997
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 2998 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3046
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3047 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3097
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3098 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3148
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3149 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3195
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4036 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4089
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4090 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4140
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4141 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4191
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4192 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4243
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4244 --QGKKVN---RVACGSAHTL 4259
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3890 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3946
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3947 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3997
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3998 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4048
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4049 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4097
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4098 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4125
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3151 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3207
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3208 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3256
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3257 RVACGSSHSVAWT 3269
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4131 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4187
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4188 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4239
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4240 VAALQGKK---VNRVACGSAHT 4258
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 83/211 (39%), Gaps = 30/211 (14%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 558 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 614
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 615 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 663
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 664 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDTKHIVGI 712
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKG--LGLCP 285
CG + SS + WS G+ + +CP
Sbjct: 713 ACGPAQSFAWSSCSE-WSIGLRVPFVVDICP 742
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 463 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 522
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 523 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 570
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 571 QVWSWGDGDYGKLGRGGSDGCKTPKLI 597
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3900 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3937
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3938 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 3996
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 3997 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4043
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4044 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4082
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 412 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 470
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 471 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 523
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 524 GNYGRLGHGSSEDEAIPMLV 543
>gi|4079809|gb|AAD08657.1| HERC2 [Homo sapiens]
Length = 4834
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|410223230|gb|JAA08834.1| hect domain and RLD 2 [Pan troglodytes]
gi|410304312|gb|JAA30756.1| hect domain and RLD 2 [Pan troglodytes]
Length = 4834
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|449275747|gb|EMC84515.1| putative E3 ubiquitin-protein ligase HERC2 [Columba livia]
Length = 4840
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3157 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3209
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG + + + + + G
Sbjct: 3210 GVCQIECGAQFSLALTKSGVVWTWG--KGDYFRLGHGTDVHVRKPQVVE----------G 3257
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 LRGKKI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 42/295 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ ++WG G+LG GD E +L+PK++E +
Sbjct: 4101 VAAGGAHSACITAAGD--------LFTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4149
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4150 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4200
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG---LGLCPNASLTRNEAGDAISPILISGN 306
+ +V V+CG + ++ +G V++W + + LG + + R
Sbjct: 4201 GLGVVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPR----------QVQ 4250
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4251 GLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4301
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3121
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3122 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3176
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3177 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3226
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 3227 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDTG 3280
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3281 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3326
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 482 TLGPQLVQSLASRNIVKIAAHSDGHHYLALSANGEVF--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I + + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG ++++WG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYTWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3057
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3058 SGGRHAMALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3106
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3107 DIACGSSHSAAITS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3157
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3158 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3208
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3209 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGTDVHVRKPQVV 3255
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 25/205 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S P V G V+ V+
Sbjct: 554 VVHIACGSTYSAAITAEGELYTWGRG---NYGRLGHGSSEDQTIPMLVTGLKGLKVIDVS 610
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS +A+ G+ + SWG + G+LG G + PK+IE QD
Sbjct: 611 CGSGDAQTLAVTENGQVW--------SWGDGDYGKLGRGGSDGCKTPKLIEKL-QD--LD 659
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS + LT + +T+G G+N +LGHGT + P+ ++ L +
Sbjct: 660 IVKVRCGSQFSIALTK--------DGQVYTWGKGDNQRLGHGTEEHVRYPKLLEGL-KGK 710
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
++ V G H ++ +V SWG
Sbjct: 711 KVIDVAAGSTHCLALTEDSEVHSWG 735
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 107/238 (44%), Gaps = 44/238 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VAC + + L G Y A N+ LG P+++++ +
Sbjct: 454 VVQVACAEKRFLILSRNGRVYTQ---------AYNSDTLG---------PQLVQSLASRN 495
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + G + AL + + +++G G+ G+LGHG T P+ + L
Sbjct: 496 IVKIAAHSDGHHYLALSANGE---------VFSWGCGDGGRLGHGDTVPLEEPKMISALS 546
Query: 249 QYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
++V + CG +++ +++ G++++WG L + D P+L++G
Sbjct: 547 GKQAGKHVVHIACGSTYSAAITAEGELYTWGRGN------YGRLGHGSSEDQTIPMLVTG 600
Query: 306 NGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K D V+CG+ A T+ VT++G ++WSWG G G LG G + P ++
Sbjct: 601 L--KGLKVID---VSCGSGDAQTLAVTENG-QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3950 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4007 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4057
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4058 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4108
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ +++AGD+++WG + L ++ D + P L+ G + D +ACG+
Sbjct: 4109 ACITAAGDLFTWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 4157
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4158 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4185
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 62/152 (40%), Gaps = 21/152 (13%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ W D G S P
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWQ--VFRDYHRLGHGSDDHVRRPRQ 4248
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4249 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4300
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4301 VAALQGKK---INRVACGSAHTLAWSTSKPAN 4329
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 86/237 (36%), Gaps = 58/237 (24%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I++ V AGG S I AG L+ WG G P V G+ V+
Sbjct: 4096 IEVVDVAAGGAHSACITAAGDLFTWGKGRY---GRLGHGDSEDQLKPKLVEALQGYRVID 4152
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4153 IACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TGLG 4203
Query: 192 VYEVTCGSFHTALLT-----------------------HRKRPNDM-------------- 214
V +V CGS + LT H +RP +
Sbjct: 4204 VVKVECGSQFSVALTKSGAVYTWQVFRDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATG 4263
Query: 215 -LESMC-------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L +C +T+G + GQLG GTT + P V L Q + V CG HT
Sbjct: 4264 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVACGSAHT 4319
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3960 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3997
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3998 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4056
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4103
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ +T G L++WG+GR G LG G + D P +V
Sbjct: 4104 GGAHSACITAAG-DLFTWGKGRYGRLGHGDSEDQLKPKLV 4142
>gi|426378407|ref|XP_004055918.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like, partial [Gorilla gorilla gorilla]
Length = 4586
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2799 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 2855
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2856 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2904
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 2905 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 2957
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2958 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3009
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3010 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3055
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 146/343 (42%), Gaps = 49/343 (14%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMS 84
T L DG+L +G + I ++ P LE + IK +V +GG
Sbjct: 3748 TLLAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLE----SIQHVFIKKVAVNSGGKHC 3803
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
LA+ + G ++ WG + G + P + G VV VA G H + +
Sbjct: 3804 LALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAGGAHSACVTA 3860
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS--FHT 202
AG+ Y+WG G+LG D E +L+PK++E V ++ CGS T
Sbjct: 3861 AGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VVDIACGSGDAQT 3909
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
LT + W++G G+ G+LG G + VP ++ L + +V V+CG
Sbjct: 3910 LCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-TGLGVVKVECGSQF 3960
Query: 263 TSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
+ ++ +G V++WG KG LG + + R G G K +
Sbjct: 3961 SVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QVQGLQGKKV---IA 4005
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4006 IATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4047
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V VVK+A S+ H +AL + GE Y SWG + +LG GD
Sbjct: 458 TLVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVY--------SWGCGDGRRLGHGDT 509
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 510 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 561
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 562 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 614
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 615 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 666
Query: 348 GTG 350
G G
Sbjct: 667 GHG 669
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 2828 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 2869
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 2870 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 2924
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2925 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2974
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 2975 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3028
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3029 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3074
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2750 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 2803
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 2804 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 2852
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 2853 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 2903
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 2904 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 2954
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2955 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3003
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 3843 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 3896
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 3897 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 3947
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 3948 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 3998
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 3999 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA- 4049
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4050 -LQGKKVN---RVACGSAHTL 4066
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + ++A+
Sbjct: 3697 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLLAVT 3753
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3754 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3804
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3805 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 3855
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 3856 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 3904
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3905 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3932
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 88/227 (38%), Gaps = 35/227 (15%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 589 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 645
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 646 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 694
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 695 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 743
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLC-PNASLTRNEAGDAISPIL 302
CG +S SS + W M GLC P R+ + + +L
Sbjct: 744 ACGPAQSSAGSSX---YEWSM----GLCVPQGGDIRSTTSEQLDLLL 783
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2959 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3015
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3016 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3064
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3065 RVACGSSHSVAWT 3077
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 3938 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 3994
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 3995 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4046
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4047 VAALQGKK---VNRVACGSAHT 4065
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ +LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 494 YSWGCGDGRRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 553
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 554 RGN------YGRLGHGSSEDEAIPMLVAG-----LKGLKVIDVACGSGDAQTLAVTENG- 601
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 602 QVWSWGDGDYGKLGRGGSDGCKTPKLI 628
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 63/125 (50%), Gaps = 11/125 (8%)
Query: 239 LVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
LVP+ V+ L + V ++ H +++ G+V+SWG G L ++ E
Sbjct: 459 LVPQLVQGLASRNVVKIAAHSDGHHYLALAATGEVYSWGCGDGRRLGHGDTVPLEE---- 514
Query: 298 ISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
P +IS +G K V +ACG+ ++ +T +G +L++WGRG G LG G + D
Sbjct: 515 --PKVISAFSGKQAGKHV--VHIACGSTYSAAITAEG-ELYTWGRGNYGRLGHGSSEDEA 569
Query: 357 APAIV 361
P +V
Sbjct: 570 IPMLV 574
>gi|395855546|ref|XP_003800216.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Otolemur garnettii]
Length = 5093
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3308 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3364
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3365 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3413
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3414 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3466
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3467 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3518
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3519 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3564
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 742 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 793
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I TF+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 794 VPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 845
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 846 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 898
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 899 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 950
Query: 348 GTG 350
G G
Sbjct: 951 GHG 953
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G V
Sbjct: 4298 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVAD 4354
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4355 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4403
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4404 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4454
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 4455 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 4502
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4503 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4554
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 127/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3337 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3378
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3379 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3433
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3434 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3483
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3484 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3537
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ HG + Q +VACG++H+V
Sbjct: 3538 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----HGLEGQKITRVACGSSHSV 3583
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G L S P P V + V KVA
Sbjct: 3259 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGLSSGTVPIPRQVTALSSYVVKKVAVH 3314
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3315 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3363
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3364 DIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3414
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3415 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3465
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3466 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3512
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4350 IEVADVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4403
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4404 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4454
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4455 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4505
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4506 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4557
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4558 --QGKKVN---RVACGSAHTL 4573
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 4204 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4260
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4261 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4311
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + + V G H+
Sbjct: 4312 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVADVAAGGAHS 4362
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4363 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4411
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4412 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4439
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3468 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3524
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P ++ +
Sbjct: 3525 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVHGLEGQK---IT 3573
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3574 RVACGSSHSVAWT 3586
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4445 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4501
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4502 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4553
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4554 VAALQGKK---VNRVACGSAHT 4572
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 873 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 929
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 930 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 978
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 979 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDTKHIVGI 1027
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 1028 ACGPAQSFAWSSCSE-WSIGLR 1048
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 778 YSWGCGDGGRLGHGDTVPLEEPKVISTFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 837
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 838 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 885
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 886 QVWSWGDGDYGKLGRGGSDGCKTPKLI 912
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 4214 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 4251
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 4252 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4310
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I ++ VA
Sbjct: 4311 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVA-------------DVAA 4357
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4358 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4396
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 727 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 785
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 786 GRLGHGDTVPLEEPKVISTFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 838
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 839 GNYGRLGHGSSEDEAIPMLV 858
>gi|397515765|ref|XP_003828114.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Pan paniscus]
Length = 4839
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3052 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3108
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3109 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3157
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3158 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3210
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3211 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3262
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3263 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3308
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4044 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4100
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4101 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4149
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4150 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4200
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4201 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4248
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4249 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4300
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 427 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 478
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 479 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 530
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 531 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 583
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 584 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 635
Query: 348 GTG 350
G G
Sbjct: 636 GHG 638
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3081 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3122
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3123 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3177
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3178 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3227
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3228 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3281
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3282 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3327
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 3003 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3056
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3057 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3105
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3106 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3156
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3157 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3207
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3208 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3256
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4096 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4149
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4150 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4200
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4201 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4251
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4252 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4303
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4304 --QGKKVN---RVACGSAHTL 4319
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3950 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4006
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4007 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4057
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4058 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4108
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4109 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4157
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4158 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4185
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3212 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3268
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3269 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3317
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3318 RVACGSSHSVAWT 3330
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4191 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4247
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4248 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4299
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4300 VAALQGKK---VNRVACGSAHT 4318
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 558 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 614
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 615 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 663
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 664 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 712
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 713 ACGPAQSFAWSSCSE-WSIGLR 733
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 463 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 522
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 523 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 570
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 571 QVWSWGDGDYGKLGRGGSDGCKTPKLI 597
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3960 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3997
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3998 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4056
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4057 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4103
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4104 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4142
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 412 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 470
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 471 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 523
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 524 GNYGRLGHGSSEDEAIPMLV 543
>gi|442318560|ref|YP_007358581.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486202|gb|AGC42897.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 866
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 92/318 (28%), Positives = 134/318 (42%), Gaps = 49/318 (15%)
Query: 72 IKIC-SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
++ C SV G +L + + G+LW WGN P S G P+ V + VV
Sbjct: 144 VQFCPSVSPGVYHTLEVKSGGSLWAWGNNP---SGQLGNGQRTQRNAPTRVRGLN--QVV 198
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+ G+EH VA+ ED ++WG+N GQLG G R P + +
Sbjct: 199 SASAGAEHSVAVT--------EDGSVWTWGSNAYGQLGDGTNTLRAVPVQVPGMSD---- 246
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V GS AL + WT+G+ +G+LG GTT +L+P QV P
Sbjct: 247 VVAVAAAGSRTVAL---------KADGTVWTWGINSSGELGDGTTTHSLLPIQV---PNL 294
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ ++ GL+HT V G WSWG L +L R + P+L++G
Sbjct: 295 SGVTNIAAGLWHTLAVKKDGSAWSWGNNAYGQLGDGTTLNR------LRPVLVAG----- 343
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
++ G HTV + DG W WG +G LG G T + P V LT+
Sbjct: 344 --LTGVRALSGGVVHTVALKWDG-TAWGWGYNSAGQLGNGTTTNSSIPVQV--AALTQAV 398
Query: 371 KQDELNTGGLDDEIKTKD 388
E++ GG + +D
Sbjct: 399 ---EIDAGGYHTLARRQD 413
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 123/289 (42%), Gaps = 43/289 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ V AG ++A+ G + WG G + + TP V + G V ++
Sbjct: 551 VIDVAAGVNHTVALSADGTVAAWGYNAY---GQLGNGTTANQLTPQSVPELDG--VTAIS 605
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS H VAL + D ++WG+N GQLG G R P + + V
Sbjct: 606 AGSTHTVALKA--------DGTVWAWGSNLYGQLGDGTFTHRSSPVQVPSLEN-----VV 652
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G FHT + + W +G G GQLG GTT + VP QV L +
Sbjct: 653 SIAAGHFHTVAVKG--------DGTLWVWGYGPQGQLGLGTTTNQSVPVQVSGLG---HA 701
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V++ G +HT + + G VW+WG G +A++ + SP+L+ P
Sbjct: 702 VAIAAGGYHTVALLANGQVWTWGYNSS-GQLGDATIIQR-----YSPVLV-------PGL 748
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ + +A G T ++ DG +W++G +G LG G T +P L
Sbjct: 749 TNVIALAAGGYTTAVLKRDG-TVWAFGYNPNGQLGDGTTTSRSSPTATL 796
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 130/341 (38%), Gaps = 83/341 (24%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P+++ +V A G ++A+ G +W WG + S G +
Sbjct: 227 LGDGTNTLRAVPVQVPGMSDVVAVAAAGSRTVALKADGTVWTWG---INSSGELGDGTTT 283
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V + G V +A G H +A+ +D +SWG N GQLG G
Sbjct: 284 HSLLPIQVPNLSG--VTNIAAGLWHTLAVK--------KDGSAWSWGNNAYGQLGDGTTL 333
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+RLRP ++ V ++ G HT L + W +G GQLG+G
Sbjct: 334 NRLRPVLVAGLT-----GVRALSGGVVHTVAL--------KWDGTAWGWGYNSAGQLGNG 380
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASL 289
TT ++ +P QV L Q V +D G +HT G +++WG G G ++S+
Sbjct: 381 TTTNSSIPVQVAALTQ---AVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTGNTTSSSV 437
Query: 290 ----------------------------------------TRNEAGDAISPILISGNGPH 309
T E GD + S P
Sbjct: 438 PVQVPLSGVRWFGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGELGDGTTTQRTS---PT 494
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
V+ A G+AH+V + G +W+WG G LG G
Sbjct: 495 AVVVSGIVKTAGGSAHSVALGAGG-AVWTWGYNAYGQLGNG 534
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 124/315 (39%), Gaps = 63/315 (20%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L + +T AP ++ S AG S+A+ G++W WG+ L D +
Sbjct: 177 LGNGQRTQRNAPTRVRGLNQVVSASAGAEHSVAVTEDGSVWTWGSNAYGQLGDGT----- 231
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
++ PV VV VA VAL + D ++WG N++G+LG G
Sbjct: 232 ---NTLRAVPVQVPGMSDVVAVAAAGSRTVALKA--------DGTVWTWGINSSGELGDG 280
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
L P + + V + G +HT L +K + W++G GQL
Sbjct: 281 TTTHSLLPIQVPNLS-----GVTNIAAGLWHT--LAVKK------DGSAWSWGNNAYGQL 327
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPN 286
G GTT + L P V L + ++ G+ HT + G W WG G G N
Sbjct: 328 GDGTTLNRLRPVLVAGLTG---VRALSGGVVHTVALKWDGTAWGWGYNSAGQLGNGTTTN 384
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
+S+ P+ ++ V++ G HT+ DG L++WG G
Sbjct: 385 SSI----------PVQVA-------ALTQAVEIDAGGYHTLARRQDG-TLYAWGDNFYGA 426
Query: 347 LGTGKTIDFFAPAIV 361
LGTG T P V
Sbjct: 427 LGTGNTTSSSVPVQV 441
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 83/364 (22%), Positives = 125/364 (34%), Gaps = 107/364 (29%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + + TN P+++ + + AGG +LA G L+ WG+ T +
Sbjct: 377 LGNGTTTNSSIPVQVAALTQAVEIDAGGYHTLARRQDGTLYAWGDNFYGALGTG---NTT 433
Query: 114 SSFTPSPV------WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
SS P V W G+ + ++ + + ++WG N NG+L
Sbjct: 434 SSSVPVQVPLSGVRW-----------FGAGYYYSVAERKKVNMAQVHTLFAWGHNTNGEL 482
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G R P + + + GS H+ L WT+G
Sbjct: 483 GDGTTTQRTSPTAVVVS------GIVKTAGGSAHSVALG--------AGGAVWTWGYNAY 528
Query: 228 GQLGHG--------------------------------------------------TTQS 237
GQLG+G TT +
Sbjct: 529 GQLGNGTTTQVVTPTQLPGMSGVIDVAAGVNHTVALSADGTVAAWGYNAYGQLGNGTTAN 588
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
L P+ V EL + ++ G HT + + G VW+WG G + + T
Sbjct: 589 QLTPQSVPELDG---VTAISAGSTHTVALKADGTVWAWGSNL-YGQLGDGTFTHRS---- 640
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
SP+ + P ++ V +A G HTV V DG LW WG G G LG G T +
Sbjct: 641 -SPVQV-------PSLENVVSIAAGHFHTVAVKGDG-TLWVWGYGPQGQLGLGTTTNQSV 691
Query: 358 PAIV 361
P V
Sbjct: 692 PVQV 695
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 89/237 (37%), Gaps = 67/237 (28%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T+ +P+++ S+ AG ++A+ G LW+WG P +G L
Sbjct: 631 LGDGTFTHRSSPVQVPSLENVVSIAAGHFHTVAVKGDGTLWVWGYGP------QGQLGLG 684
Query: 114 SSFTPS-PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
++ S PV V +A G H VAL++ G+ ++WG N++GQLG
Sbjct: 685 TTTNQSVPVQVSGLGHAVAIAAGGYHTVALLANGQ--------VWTWGYNSSGQLGDATI 736
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------------------THRKR 210
R P ++ V + G + TA+L T R
Sbjct: 737 IQRYSPVLVPGLTN-----VIALAAGGYTTAVLKRDGTVWAFGYNPNGQLGDGTTTSRSS 791
Query: 211 P---------------NDM--LESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELP 248
P N M L W G N GQLG GTT P QV LP
Sbjct: 792 PTATLMNSVVDLSSGVNHMMGLRKDAWVRACGYNSAGQLGDGTTTQRPTPVQVTNLP 848
>gi|134288898|ref|NP_034548.2| E3 ubiquitin-protein ligase HERC2 [Mus musculus]
gi|341941077|sp|Q4U2R1.3|HERC2_MOUSE RecName: Full=E3 ubiquitin-protein ligase HERC2; AltName: Full=HECT
domain and RCC1-like domain-containing protein 2
Length = 4836
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4097
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4098 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4146
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4147 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4197
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4245
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4246 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 534
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 586
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 587 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 639
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 640 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 691
Query: 349 TG 350
G
Sbjct: 692 HG 693
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3055 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4146
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4147 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4197
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4198 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4248
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4249 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4300
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4301 --QGKKVN---RVACGSAHTL 4316
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4004 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4054
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4105
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4106 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4154
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4155 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4182
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4244
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4245 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4296
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4297 VAALQGKK---VNRVACGSAHT 4315
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDSKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3957 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3994
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4053
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4100
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4101 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|148689921|gb|EDL21868.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_a [Mus
musculus]
Length = 4902
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3114 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3170
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3171 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3219
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3220 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3272
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3273 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3324
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3325 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3370
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4107 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4163
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4164 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4212
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4213 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4263
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4264 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4311
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4312 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4363
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 551 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 602
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 603 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 654
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 655 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 707
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 708 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 759
Query: 349 TG 350
G
Sbjct: 760 HG 761
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3143 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3184
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3185 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3239
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3240 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3289
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3290 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3343
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3344 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3389
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 3065 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3120
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3121 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3169
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3170 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3220
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3221 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3271
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3272 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3318
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4159 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4212
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4213 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4263
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4264 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4314
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4315 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4366
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4367 --QGKKVN---RVACGSAHTL 4382
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 4013 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4069
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4070 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4120
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4121 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4171
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4172 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4220
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4221 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4248
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3274 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3330
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3331 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3379
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3380 RVACGSSHSVAWT 3392
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4254 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4310
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4311 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4362
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4363 VAALQGKK---VNRVACGSAHT 4381
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 681 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 737
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 738 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 786
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 787 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDSKHIVGI 835
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 836 ACGPAQSFAWSSCSE-WSIGLR 856
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 586 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 645
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 646 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 693
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 694 QVWSWGDGDYGKLGRGGSDGCKTPKLI 720
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 4023 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 4060
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 4061 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4119
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4120 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4166
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4167 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4205
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 535 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 593
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 594 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 646
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 647 GNYGRLGHGSSEDEAIPMLV 666
>gi|148689922|gb|EDL21869.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 2, isoform CRA_b [Mus
musculus]
Length = 4841
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3053 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3109
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3110 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3158
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3159 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3211
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3212 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3263
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3264 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3309
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4046 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4102
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4103 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4151
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4152 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4202
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4203 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4250
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4251 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4302
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 488 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 539
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 540 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 591
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 592 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 644
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 645 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 696
Query: 349 TG 350
G
Sbjct: 697 HG 698
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3082 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3123
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3124 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3178
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3179 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3228
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3229 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3282
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3283 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3328
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 3004 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3059
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3060 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3108
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3109 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3159
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3160 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3210
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3211 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3257
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4098 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4151
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4152 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4202
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4203 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4253
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4254 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4305
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4306 --QGKKVN---RVACGSAHTL 4321
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3952 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4008
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4009 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4059
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4060 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4110
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4111 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4159
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4160 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4187
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3213 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3269
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3270 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3318
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3319 RVACGSSHSVAWT 3331
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4193 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4249
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4250 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4301
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4302 VAALQGKK---VNRVACGSAHT 4320
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 618 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 674
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 675 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 723
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 724 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDSKHIVGI 772
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 773 ACGPAQSFAWSSCSE-WSIGLR 793
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 523 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 582
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 583 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 630
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 631 QVWSWGDGDYGKLGRGGSDGCKTPKLI 657
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3962 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3999
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 4000 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4058
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4059 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4105
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4106 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4144
Score = 45.4 bits (106), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 472 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 530
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 531 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 583
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 584 GNYGRLGHGSSEDEAIPMLV 603
>gi|441617074|ref|XP_004088418.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Nomascus leucogenys]
Length = 4530
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2743 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 2799
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2800 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2848
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 2849 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 2901
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2902 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 2953
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 2954 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 2999
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3735 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 3791
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 3792 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 3840
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 3841 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 3891
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 3892 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 3939
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 3940 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 3991
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 2772 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 2813
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 2814 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 2868
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2869 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2918
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 2919 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 2972
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 2973 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3018
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2694 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 2747
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 2748 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 2796
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 2797 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 2847
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 2848 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 2898
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2899 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2947
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 3787 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 3840
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 3841 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 3891
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 3892 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 3942
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 3943 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 3994
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 3995 --QGKKVN---RVACGSAHTL 4010
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 72/148 (48%), Gaps = 20/148 (13%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 436 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 487
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 488 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 539
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCG 259
HG+++ +P V L + + ++ V CG
Sbjct: 540 HGSSEDEAIPMLVAGL-KGLKVIDVACG 566
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3641 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3697
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3698 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3748
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3749 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 3799
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 3800 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 3848
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3849 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3876
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2903 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2959
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 2960 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3008
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3009 RVACGSSHSVAWT 3021
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 3882 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 3938
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 3939 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 3990
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 3991 VAALQGKK---VNRVACGSAHT 4009
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3651 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3688
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3689 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 3747
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 3748 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 3794
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 3795 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 3833
Score = 45.8 bits (107), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 421 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 479
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 480 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 532
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 533 GNYGRLGHGSSEDEAIPMLV 552
>gi|195168456|ref|XP_002025047.1| GL26839 [Drosophila persimilis]
gi|194108492|gb|EDW30535.1| GL26839 [Drosophila persimilis]
Length = 3840
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 1915 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVETLRSK 1971
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VACGS H A+ S GE Y+WG G+LG GD ++L+PK++
Sbjct: 1972 KIRDVACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNATQLKPKLVAALAGR 2023
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 2024 R---VIQVACGSRDAQTLALTE------DGSVFSWGDGDFGKLGRGGSEGSDTPHEIERL 2074
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ ++ ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 2075 -SGIGVIQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI-- 2123
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 2124 -----GGLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 2176
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G V
Sbjct: 3064 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMNVAD 3120
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRP+++E +
Sbjct: 3121 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPQLVEALLG---YR 3169
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 3170 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 3222
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++ V+CG + ++ +G V++W G LG + R + A+
Sbjct: 3223 GVIKVECGSQFSVALTKSGAVYTWSKGDFHRLGHGSVDHVRRPKKVAAL----------Q 3272
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 3273 GKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 3320
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 100/204 (49%), Gaps = 28/204 (13%)
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHR 208
G++ Y+ G NG+LGLG + P + +Q + V +V G H LT
Sbjct: 1881 GQNGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQ---YVVKKVAVHSGGKHALALT-- 1935
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
L+ +++G GE+G+LGHG + P V+ L + + V CG H++ +SS
Sbjct: 1936 ------LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETL-RSKKIRDVACGSSHSAAISS 1988
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHT 326
G++++WG+ + L + + P L++ G + +QVACG+ A T
Sbjct: 1989 QGELYTWGLGE------YGRLGHGDNATQLKPKLVAALA--GRRV---IQVACGSRDAQT 2037
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTG 350
+ +T+DG ++SWG G G LG G
Sbjct: 2038 LALTEDG-SVFSWGDGDFGKLGRG 2060
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ W D G S+
Sbjct: 3205 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWSKG---DFHRLGHGSVDH 3261
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 3262 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 3313
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 3314 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 3352
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS ++
Sbjct: 1828 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVGQN 1883
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 1884 GK--------VYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 1935
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + + + K +D VACG++H
Sbjct: 1936 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVETL----------RSKKIRD---VACGSSH 1982
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 1983 SAAISSQG-ELYTWGLGEYGRLGHGDNATQLKPKLV 2017
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 2077 IGVIQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIH 2133
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ +
Sbjct: 2134 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF- 2182
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 2183 VNRVACGSSHS 2193
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 101/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 2980 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 3031
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 3032 ----FATGYGSGGRLGVGGADSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 3086
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 3087 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMNVA-------------DIACGSAHSAAITA 3133
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 3134 SGHVL-TWGKGRYGRLGHGDSEDQLRPQLV 3162
>gi|380817670|gb|AFE80709.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4829
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3042 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3098
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3099 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3147
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3148 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3200
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3201 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3252
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3253 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3298
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4034 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4090
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4091 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4139
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4140 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4190
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4191 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4238
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4239 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4290
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3071 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3112
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3113 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3167
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3168 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3217
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3218 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3271
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3272 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3317
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2993 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3046
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3047 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3095
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3096 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3146
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3147 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3197
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3198 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3246
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4086 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4139
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4140 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4191 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4241
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4242 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4293
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4294 --QGKKVN---RVACGSAHTL 4309
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3940 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3996
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3997 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4047
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4048 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4098
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4099 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4147
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4148 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4175
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3202 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3258
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3259 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3307
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3308 RVACGSSHSVAWT 3320
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4181 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4237
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4238 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4289
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4290 VAALQGKK---VNRVACGSAHT 4308
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3950 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3987
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3988 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4046
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4047 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4093
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4094 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4132
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|380787033|gb|AFE65392.1| E3 ubiquitin-protein ligase HERC2 [Macaca mulatta]
Length = 4834
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.4 bits (106), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|354489070|ref|XP_003506687.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Cricetulus griseus]
Length = 4836
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4097
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4098 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4146
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4147 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4197
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4245
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4246 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 534
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 586
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 587 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 639
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 640 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 691
Query: 349 TG 350
G
Sbjct: 692 HG 693
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3055 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4146
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4147 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4197
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4198 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4248
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4249 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4300
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4301 --QGKKVN---RVACGSAHTL 4316
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4004 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4054
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4105
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4106 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4154
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4155 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4182
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4244
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4245 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4296
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4297 VAALQGKK---VNRVACGSAHT 4315
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCXE-WSIGLR 788
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3957 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3994
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4053
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4100
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4101 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 45.4 bits (106), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|334346980|ref|XP_001366466.2| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Monodelphis domestica]
Length = 4706
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG + + + + + G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWG--KGDYFRLGHGTDVHVRKPQVVE----------G 3254
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3255 LRGKKI---VHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE + SWG + G+LG GD
Sbjct: 482 TLGPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVF--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I + + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ +V +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 125/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHGT P+ V+ L + +V V G H V+ G
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGTDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDTG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/294 (27%), Positives = 130/294 (44%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGISSGTVPIPRQITALSNYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3055 SGGRHAMALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIACGSSHSAAITS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGTDVHVRKPQVV 3252
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 33/206 (16%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
G+ V+ +ACGS L +D +SWG + G+LG G + P I++
Sbjct: 4012 LQGYRVIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS 4065
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
+ V +V CGS + LT +T+G G+ +LGHG+ P Q
Sbjct: 4066 L---TGLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQ 4114
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPI 301
V+ L Q ++++ G H + G+V++WG E LG ++ R P
Sbjct: 4115 VQGL-QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PR 4165
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTV 327
L++ G K +VACG+AHT+
Sbjct: 4166 LVAAL--QGKKIN---RVACGSAHTL 4186
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G + V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGTDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 80/205 (39%), Gaps = 28/205 (13%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
S +G +LA+ G +W WG+ D G TP + VVKV CG
Sbjct: 610 SCGSGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCG 666
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S+ VAL G+ Y SWG +N +LG G E PK++E V +V
Sbjct: 667 SQFSVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VVDV 715
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYL 253
GS H LT E W G N Q H T PE LP ++
Sbjct: 716 AAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRITKPEPTA-LPGLDTKHI 764
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGME 278
V + CG + SS + WS G+
Sbjct: 765 VGIACGPAQSFAWSSCSE-WSIGLR 788
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4058 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4114
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y +WG N+ GQLG G + RP++
Sbjct: 4115 VQGLQGKKVIAIATGSLHCVCCTEDGEVY--------TWGDNDEGQLGDGTTNAIQRPRL 4166
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4167 VAALQGKK---INRVACGSAHTLAWSTSKPAN 4195
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 4024 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 4080
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 4081 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 4129
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4130 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 4180
Query: 259 GLFHT 263
G HT
Sbjct: 4181 GSAHT 4185
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 76/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + L ++V + CG +++ +++ G++++WG
Sbjct: 518 FSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D V+CG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDQTIPMLVTGL--KGLKVID---VSCGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 93/235 (39%), Gaps = 55/235 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSP------------------------WAV 192
Y WG N+ GQLG + P E P + V
Sbjct: 3958 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPIQLIGGEQTLFAVTADGKVEALQGYRV 4017
Query: 193 YEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4018 IDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-TG 4068
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGN 306
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4069 LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QVQ 4116
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4117 GLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4167
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H +++ G+V+SWG G G + E IS + G H V +AC
Sbjct: 507 HYLALAATGEVFSWGCGDG-GRLGHGDTVPLEEPKMISALSGKQAGKH------VVHIAC 559
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ ++ +T +G +L++WGRG G LG G + D P +V
Sbjct: 560 GSTYSAAITAEG-ELYTWGRGNYGRLGHGSSEDQTIPMLV 598
>gi|402873774|ref|XP_003919728.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase HERC2
[Papio anubis]
Length = 4123
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2336 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 2392
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2393 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2441
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 2442 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 2494
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2495 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 2546
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 2547 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 2592
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3328 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 3384
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 3385 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 3433
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 3434 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 3484
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 3485 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 3532
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 3533 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 3584
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 2365 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 2406
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 2407 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 2461
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2462 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2511
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 2512 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 2565
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 2566 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 2611
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2287 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 2340
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 2341 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 2389
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 2390 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 2440
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 2441 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 2491
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2492 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2540
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 3380 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 3433
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 3434 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 3484
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 3485 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 3535
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 3536 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 3587
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 3588 --QGKKVN---RVACGSAHTL 3603
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3234 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3290
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3291 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3341
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3342 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 3392
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 3393 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 3441
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3442 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3469
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2496 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2552
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 2553 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2601
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 2602 RVACGSSHSVAWT 2614
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 3475 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 3531
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 3532 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 3583
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 3584 VAALQGKK---VNRVACGSAHT 3602
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3244 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3281
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3282 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 3340
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 3341 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 3387
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 3388 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 3426
>gi|297296008|ref|XP_001109429.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like [Macaca
mulatta]
Length = 4840
Score = 98.2 bits (243), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4070 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4126
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4127 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4175
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4176 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4226
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4227 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4274
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4275 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4326
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4122 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4175
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4176 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4226
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4227 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4277
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4278 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4329
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4330 --QGKKVN---RVACGSAHTL 4345
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3976 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4032
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4033 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4083
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4084 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4134
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4135 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4183
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4184 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4211
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4217 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4273
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4274 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4325
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4326 VAALQGKK---VNRVACGSAHT 4344
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3986 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 4023
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 4024 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4082
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4083 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4129
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4130 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4168
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|195345959|ref|XP_002039536.1| GM23027 [Drosophila sechellia]
gi|194134762|gb|EDW56278.1| GM23027 [Drosophila sechellia]
Length = 3806
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 2724 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVEALRAK 2780
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VACGS H A+ S GE Y+WG G+LG GD ++L+PK++
Sbjct: 2781 KIRDVACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNTTQLKPKLVTALAGR 2832
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 2833 R---VVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 2883
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ +V ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 2884 -SGIGVVQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI-- 2932
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 2933 -----GGLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 2985
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 2637 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQ- 2691
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 2692 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 2744
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 2745 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 2791
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 2792 SAAISSQG-ELYTWGLGEYGRLGHGDNTTQLKPKLV 2826
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 2886 IGVVQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIH 2942
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ +
Sbjct: 2943 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF- 2991
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 2992 VNRVACGSSHS 3002
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 116/269 (43%), Gaps = 44/269 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV G S AI G L WG + G + P+ V H VV VA
Sbjct: 324 VQSVYCGCSYSAAITCGGNLLTWGRG---TYARLGHGNSDDRSLPTLVVALSDHMVVDVA 380
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
GS H +AL S G + ++WG + G+LG G+ L+P ++E+ +
Sbjct: 381 LGSGDAHSLALTSEG--------LVFAWGDGDYGKLGNGNCNGSLQPILVESLPR----- 427
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG----LGENGQLGHGTTQSALVPEQVKEL 247
V V GS + L+ E +T+G LG QL + Q VP V L
Sbjct: 428 VQRVFAGSQFSVALSS--------EGQLYTWGKATCLGH--QLVERSVQGCSVPRLVSSL 477
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q+ +V V + H +SS+G+V+ WG +CP AS++ +PIL+S
Sbjct: 478 -QHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP-ASVSSEPL--LRTPILVS--- 530
Query: 308 PHGPKFQDPVQ-VACGAAHTVLVTDDGYK 335
P F P +AC +A +++ T ++
Sbjct: 531 --LPTF--PASGIACTSAQSLVWTQSSHQ 555
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++ ++ G++ +WG
Sbjct: 292 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVYCGCSYSAAITCGGNLLTWGRGT 350
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
A L + D P L+ H V + G AH++ +T +G +++W
Sbjct: 351 ------YARLGHGNSDDRSLPTLVVALSDH---MVVDVALGSGDAHSLALTSEGL-VFAW 400
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-----------KQDELNTGG----LDDEI 384
G G G LG G P +V P + + +L T G L ++
Sbjct: 401 GDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL 460
Query: 385 KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFG 429
+ ++G +L S+++ +++ +SV A G +FG
Sbjct: 461 VERSVQGCSV--PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 503
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 88/191 (46%), Gaps = 34/191 (17%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YSWG + +LG GD +R P I Q +VY CG ++A +T
Sbjct: 292 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHCVQSVY---CGCSYSAAIT--------CG 340
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSW 275
T+G G +LGHG + +P V L ++ + V++ G H+ ++S G V++W
Sbjct: 341 GNLLTWGRGTYARLGHGNSDDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAW 400
Query: 276 G----MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
G + G G C N SL PIL+ P+ Q +V G+ +V ++
Sbjct: 401 GDGDYGKLGNGNC-NGSL---------QPILVESL----PRVQ---RVFAGSQFSVALSS 443
Query: 332 DGYKLWSWGRG 342
+G +L++WG+
Sbjct: 444 EG-QLYTWGKA 453
>gi|387541824|gb|AFJ71539.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G + S+ TP V G + ++
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRTFPSTTTPQIVEHLAGVPLAQI 195
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 196 SAGEAHSMALSMSGNI--------YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK---V 244
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL
Sbjct: 245 EFLACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN-R 295
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 296 VTQIACGRWHTLAYVSDFGKVFSFG 320
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 40/238 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G S P+I+E
Sbjct: 139 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRTFPSTTTPQIVEHL-AG 189
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 190 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEAL 239
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-- 304
Q V ++ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 240 DNQKVEFLA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 291
Query: 305 -GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
GN Q+ACG HT+ D K++S+G G+ G LG G T+D P V
Sbjct: 292 VGN--------RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
>gi|384947464|gb|AFI37337.1| E3 ISG15--protein ligase HERC5 [Macaca mulatta]
Length = 1023
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G + S+ TP V G + ++
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRTFPSTTTPQIVEHLAGVPLAQI 195
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 196 SAGEAHSMALSMSGNI--------YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK---V 244
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL
Sbjct: 245 EFLACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN-R 295
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 296 VTQIACGRWHTLAYVSDFGKVFSFG 320
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 40/238 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G S P+I+E
Sbjct: 139 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRTFPSTTTPQIVEHL-AG 189
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 190 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNEFGQLGLGHTESKDSPSLIEAL 239
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-- 304
Q V ++ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 240 DNQKVEFLA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 291
Query: 305 -GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
GN Q+ACG HT+ D K++S+G G+ G LG G T+D P V
Sbjct: 292 VGN--------RVTQIACGRWHTLAYVSDFGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
>gi|194206384|ref|XP_001917973.1| PREDICTED: LOW QUALITY PROTEIN: e3 ubiquitin-protein ligase HERC2
[Equus caballus]
Length = 4840
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3157 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3209
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3210 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3261
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3262 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3307
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ VP V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAVPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G +V
Sbjct: 4045 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIELVD 4101
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4102 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4150
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4151 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4201
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4202 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4249
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4250 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4301
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3080 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3121
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3122 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3176
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3177 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3226
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3227 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3280
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3281 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3326
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P V + V KVA
Sbjct: 3002 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQVTALSSYVVKKVA 3055
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3056 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3104
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3105 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3155
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3156 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3206
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3207 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3255
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4097 IELVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4150
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4151 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4201
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4202 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4252
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R A+
Sbjct: 4253 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVPAL-------- 4304
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4305 --QGKKVN---RVACGSAHTL 4320
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3951 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4007
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4008 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4058
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + LV V G H+
Sbjct: 4059 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIELVDVAAGGAHS 4109
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4110 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 4158
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4159 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4186
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3211 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3267
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3268 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3316
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3317 RVACGSSHSVAWT 3329
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4192 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4248
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4249 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4300
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4301 VPALQGKK---VNRVACGSAHT 4319
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAVPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3961 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3998
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3999 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4057
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4058 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEL-------------VDVAA 4104
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4105 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4143
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAVPMLV 598
>gi|402869932|ref|XP_003898997.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Papio anubis]
Length = 1023
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 138 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 195
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 196 SAGEAHSMALSMSGNV--------YSWGKNEFGQLGLGHTESKDSPSLIEALDNQK---V 244
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL
Sbjct: 245 EFLACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN-R 295
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 296 VTQIACGRWHTLAYVSDLGKVFSFG 320
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 115/238 (48%), Gaps = 40/238 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 139 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 189
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 190 VPLA--QISAGEAHSMALS--------MSGNVYSWGKNEFGQLGLGHTESKDSPSLIEAL 239
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-- 304
Q V ++ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 240 DNQKVEFLA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 291
Query: 305 -GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
GN Q+ACG HT+ D K++S+G G+ G LG G T+D P V
Sbjct: 292 VGN--------RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTLDQLIPLPV 341
>gi|60360320|dbj|BAD90404.1| mKIAA0393 protein [Mus musculus]
Length = 1871
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 83 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 139
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 140 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 188
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 189 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 241
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 242 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 293
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 294 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 339
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG G + P + G VV
Sbjct: 1076 IKKVAVNSGGKHCLALSSEGEVYSWGEA---KDGKLGHGNRSPCDRPRVIESLRGIEVVD 1132
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 1133 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 1181
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 1182 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 1233
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 1234 -LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 1280
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 1281 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 1332
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 112 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 153
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 154 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 208
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 209 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 258
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 259 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 312
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 313 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 358
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 34 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 89
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 90 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 138
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 139 DIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 189
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 190 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 240
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 241 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 287
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 1128 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 1181
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 1182 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 1232
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 1233 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 1283
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 1284 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA- 1334
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 1335 -LQGKKVN---RVACGSAHTL 1351
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 982 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1038
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 1039 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 1089
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G ++G+LGHG P ++ L + + +V V G H+
Sbjct: 1090 ALSS--------EGEVYSWGEAKDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 1140
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 1141 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 1189
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 1190 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 1217
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 243 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 299
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 300 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 348
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 349 RVACGSSHSVAWT 361
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 1223 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 1279
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 1280 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 1331
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 1332 VAALQGKK---VNRVACGSAHT 1350
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 91/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 992 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 1029
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 1030 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 1088
Query: 264 SVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG K LG + R +++ I + V VA
Sbjct: 1089 LALSSEGEVYSWGEAKDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 1135
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 1136 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 1174
>gi|329663335|ref|NP_001193010.1| E3 ubiquitin-protein ligase HERC2 [Bos taurus]
gi|296490789|tpg|DAA32902.1| TPA: hect domain and RLD 3-like [Bos taurus]
Length = 4837
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ +V +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGTEVVD 4098
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4099 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4147
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4148 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4198
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4199 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4246
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V ++DG ++++WG G LG G T P +V
Sbjct: 4247 QGLQGKKV---IAIATGSLHCVCCSEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3052
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3053 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3101
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3102 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3152
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3203
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3204 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 111/260 (42%), Gaps = 42/260 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
++ V AGG S + AG L+ WG L S +E P V GH V
Sbjct: 4095 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHRV 4148
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4149 VDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TG 4199
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4200 LGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-Q 4250
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNG 307
++++ G H S G+V++WG E LG ++ R P L++
Sbjct: 4251 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL- 4301
Query: 308 PHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4302 -QGKKVN---RVACGSAHTL 4317
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3948 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4004
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4005 ADGK--------LYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4055
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + +V V G H+
Sbjct: 4056 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHS 4106
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4107 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 4155
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4156 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4183
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4245
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4246 VQGLQGKKVIAIATGSLHCVCCSEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4297
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4298 VAALQGKK---VNRVACGSAHT 4316
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3958 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TAD 4006
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 4007 GKLYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 4065
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + + L P +I + + V VA G AH+ VT G
Sbjct: 4066 WGEAE------DGKLGHGNRSPCDRPRVI-----ESLRGTEVVDVAAGGAHSACVTAAG- 4113
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG + D P +V
Sbjct: 4114 DLYTWGKGRYGRLGHSDSEDQLKPKLV 4140
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|229442359|gb|AAI72911.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 640 VKKVAVHSGGRHATALTVDGKVFSWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 696
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 697 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 745
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 746 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 798
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 799 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 850
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 851 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 896
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 1632 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 1688
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 1689 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 1737
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 1738 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 1789
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 1790 -LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 1836
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 1837 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 1888
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 669 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 710
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 711 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 765
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 766 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 815
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 816 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 869
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 870 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 915
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 591 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 644
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 645 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 693
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 694 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 744
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 745 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 795
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 796 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 844
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 1684 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 1737
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 1738 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 1788
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 1789 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 1839
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 1840 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA- 1890
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 1891 -LQGKKVN---RVACGSAHTL 1907
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 1538 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 1594
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 1595 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 1645
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 1646 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 1696
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 1697 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 1745
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 1746 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 1773
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 800 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 856
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 857 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 905
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 906 RVACGSSHSVAWT 918
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 1779 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQ 1835
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 1836 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 1887
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 1888 VAALQGKK---VNRVACGSAHT 1906
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 1548 YGWGHNHRGQLGG-----------IEGAKVKVP-----TPCEALATL------RPVQLIG 1585
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 1586 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 1644
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 1645 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 1691
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 1692 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 1730
>gi|73952408|ref|XP_536160.2| PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform 1 [Canis lupus
familiaris]
Length = 4837
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4098
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4099 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4147
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4148 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4198
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4199 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4246
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4247 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G L S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3055 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4094 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4147
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4148 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4198
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4199 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4249
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4250 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4301
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4302 --QGKKVN---RVACGSAHTL 4317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3948 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4005 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4055
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4056 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4106
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4107 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 4155
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4156 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4183
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4245
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4246 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4297
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4298 VAALQGKK---VNRVACGSAHT 4316
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3958 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3995
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3996 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4054
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4055 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4101
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4102 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4140
Score = 45.4 bits (106), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|384249755|gb|EIE23236.1| UVB-resistance 8 [Coccomyxa subellipsoidea C-169]
Length = 434
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/290 (30%), Positives = 128/290 (44%), Gaps = 43/290 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVVK 131
I V G +LA+ + G L+ +G + + + G S + P PV G V
Sbjct: 120 NIVKVACGDTHTLAVTDTGELFSFGR----NQNGQLGLGTTSDAILPQPVESLRGQEVTS 175
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG EH +A SAG+ + +WG G LG+G E R P +
Sbjct: 176 IACGGEHSLAATSAGDVF--------AWGWGRYGNLGVGPPEDRHLPSQVHGLEGVK--- 224
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V CG H+ +TFG + GQLGHG LVP+ V+ L +
Sbjct: 225 VTSVACGWRHSIAADE--------TGAVYTFGWSKYGQLGHGDCIDQLVPKAVESL-KDS 275
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPH 309
+V + G HTS +G ++SWG K LG+ N D+ +P+ + G
Sbjct: 276 RIVLIAGGWRHTSAADDSGKLYSWGWNKFGQLGIGSNT--------DSNAPVPVQG---- 323
Query: 310 GPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
PV++ +CG HT VT+ G ++SWGRG +G LG + D AP
Sbjct: 324 --LNTSPVKLLSCGWRHTFAVTEAG-DVFSWGRGVNGQLGHNEPKDTNAP 370
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/233 (31%), Positives = 108/233 (46%), Gaps = 31/233 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V+CGS H +AL+S G + SWG +GQLG GD E R +P+ I Q S
Sbjct: 16 VTSVSCGSSHSLALLSNG--------IALSWGRGEDGQLGHGDAEERKKPRAIFHLMQAS 67
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
AV + + AL R +++G G+ G+LGHG +P+ ++ L
Sbjct: 68 CSAV--CSGAEYSVALSQPRNE--------VYSWGWGDFGRLGHGDCNDVFIPQPIRALA 117
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+V V CG HT V+ G+++S+G + N L DAI P +
Sbjct: 118 GR-NIVKVACGDTHTLAVTDTGELFSFGRNQ------NGQLGLGTTSDAILPQPV----- 165
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ +ACG H++ T G +++WG GR G LG G D P+ V
Sbjct: 166 ESLRGQEVTSIACGGEHSLAATSAG-DVFAWGWGRYGNLGVGPPEDRHLPSQV 217
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 125/292 (42%), Gaps = 38/292 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ SV G SLA+ + G WG + G P ++ +
Sbjct: 14 LRVTSVSCGSSHSLALLSNGIALSWGRG---EDGQLGHGDAEERKKPRAIFHLMQASCSA 70
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V G+E+ VAL YSWG + G+LG GD P+ I +
Sbjct: 71 VCSGAEYSVALSQPRNE-------VYSWGWGDFGRLGHGDCNDVFIPQPIRALAGRN--- 120
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CG HT +T D E ++FG +NGQLG GTT A++P+ V+ L +
Sbjct: 121 IVKVACGDTHTLAVT------DTGE--LFSFGRNQNGQLGLGTTSDAILPQPVESL-RGQ 171
Query: 252 YLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ S+ CG H+ +SAGDV W WG LG+ P D P + H
Sbjct: 172 EVTSIACGGEHSLAATSAGDVFAWGWGRYGNLGVGPPE--------DRHLPSQV-----H 218
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + VACG H++ + G ++++G + G LG G ID P V
Sbjct: 219 GLEGVKVTSVACGWRHSIAADETG-AVYTFGWSKYGQLGHGDCIDQLVPKAV 269
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 81/196 (41%), Gaps = 22/196 (11%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L +G P+ S+ + +K+ SV G S+A D GA++ +G G
Sbjct: 203 LGVGPPEDRHLPSQVHGLEGVKVTSVACGWRHSIAADETGAVYTFG---WSKYGQLGHGD 259
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+ P V +V +A G H A +G+ YSWG N GQLG+G
Sbjct: 260 CIDQLVPKAVESLKDSRIVLIAGGWRHTSAADDSGK--------LYSWGWNKFGQLGIGS 311
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
P ++ N SP V ++CG HT +T +++G G NGQLG
Sbjct: 312 NTDSNAPVPVQGLNT-SP--VKLLSCGWRHTFAVTE--------AGDVFSWGRGVNGQLG 360
Query: 232 HGTTQSALVPEQVKEL 247
H + P ++ EL
Sbjct: 361 HNEPKDTNAPVRLAEL 376
>gi|281354478|gb|EFB30062.1| hypothetical protein PANDA_019422 [Ailuropoda melanoleuca]
Length = 4814
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3025 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3081
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3082 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3130
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3131 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3183
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3184 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3235
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3236 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3281
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4019 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4075
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4076 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4124
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4125 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4175
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4176 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4223
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4224 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4275
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V ++K+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 459 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 510
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 511 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 562
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 563 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 615
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 616 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 667
Query: 348 GTG 350
G G
Sbjct: 668 GHG 670
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3054 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3095
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3096 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3150
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3151 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3200
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3201 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3254
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3255 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3300
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2976 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3029
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3030 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3078
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3079 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3129
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3130 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3180
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3181 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3229
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4071 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4124
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4125 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4175
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4176 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4226
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4227 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4278
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4279 --QGKKVN---RVACGSAHTL 4294
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3925 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3981
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3982 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4032
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4033 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4083
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4084 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 4132
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4133 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4160
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3185 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3241
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3242 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3290
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3291 RVACGSSHSVAWT 3303
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4166 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4222
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4223 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4274
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4275 VAALQGKK---VNRVACGSAHT 4293
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 590 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 646
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 647 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 695
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 696 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 744
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 745 ACGPAQSFAWSSCSE-WSIGLR 765
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 495 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 554
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 555 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 602
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 603 QVWSWGDGDYGKLGRGGSDGCKTPKLI 629
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3935 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3972
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3973 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4031
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4032 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4078
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4079 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4117
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 444 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDG- 502
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 503 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 555
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 556 GNYGRLGHGSSEDEAIPMLV 575
>gi|410960762|ref|XP_003986956.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 1 [Felis
catus]
Length = 4837
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4098
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4099 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHH--- 4147
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4148 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4198
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4199 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4246
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4247 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPVLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3052
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3053 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3101
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3102 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3152
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3203
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3204 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4094 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHH 4147
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4148 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4198
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4199 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4249
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4250 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4301
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4302 --QGKKVN---RVACGSAHTL 4317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3948 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4005 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4055
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4056 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4106
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4107 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----HVVDVACGS 4155
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4156 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4183
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4245
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4246 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4297
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4298 VAALQGKK---VNRVACGSAHT 4316
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPVLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3958 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3995
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3996 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4054
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4055 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4101
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4102 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4140
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPVLV 598
>gi|88855032|ref|ZP_01129697.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
gi|88815560|gb|EAR25417.1| hypothetical protein A20C1_04101 [marine actinobacterium PHSC20C1]
Length = 524
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/292 (29%), Positives = 131/292 (44%), Gaps = 33/292 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ V AG SLA+ + G ++ WG S G S+++S P V G T +
Sbjct: 49 VVFTQVSAGINHSLAMGSDGNIYAWG---YNSSGQLGNNSILNSSVPVLVSTPDGVTFTQ 105
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+ G++H +A+ G D Y+WG N +G+LG G P ++ S
Sbjct: 106 VSAGADHSLAV--------GSDGNAYAWGRNTDGRLGNGTSTGSSVPLLVSAGAVPSGVT 157
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK--ELPQ 249
+ +V G FH+ + +++G +GQLG GTT ++ VP +V +P
Sbjct: 158 ISQVMAGGFHSLAVGSNGD--------IYSWGYNRSGQLGDGTTLASSVPLKVSAGAVPA 209
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V V G H+ + S G ++WG +G G S++R A P L+S P
Sbjct: 210 GVTFSQVSAGDRHSLAIGSNGKTYAWGEARG-GQLGIGSISRTPA-----PALVS--APA 261
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G F QV+ G H++ V DG K ++WG SG LG T AP +V
Sbjct: 262 GVSF---TQVSAGDLHSLAVGSDG-KAYAWGNNDSGQLGNATTTSSLAPVLV 309
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 79/306 (25%), Positives = 133/306 (43%), Gaps = 49/306 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFH--- 125
+ I V AGG SLA+ + G ++ WG + L D +T ++S P V
Sbjct: 156 VTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTT------LASSVPLKVSAGAVPA 209
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T +V+ G H +A+ S G+TY +WG GQLG+G P ++
Sbjct: 210 GVTFSQVSAGDRHSLAIGSNGKTY--------AWGEARGGQLGIGSISRTPAPALVS--- 258
Query: 186 QDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
+P V +V+ G H+ + + + +G ++GQLG+ TT S+L P
Sbjct: 259 --APAGVSFTQVSAGDLHSLAVGSDGK--------AYAWGNNDSGQLGNATTTSSLAPVL 308
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V + + + V G H+ + + G+ ++WG+ N L N + P+++
Sbjct: 309 VSPMGG-LAVTQVSAGADHSLAIGADGNAYAWGLNV------NGQLGNNTITTSTVPVMV 361
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP-AIVL 362
+ P G F ++ G H++ D ++WG G LG G + P AI
Sbjct: 362 TA--PDGVTF---TRIEAGGLHSLTAASD-ENTYTWGANSFGQLGNGTSDGSLVPVAISR 415
Query: 363 WPPLTE 368
+P +TE
Sbjct: 416 FPVITE 421
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 109/247 (44%), Gaps = 42/247 (17%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-- 183
G +V+ G H +A+ G D Y+WG N++GQLG + P ++ T
Sbjct: 48 GVVFTQVSAGINHSLAM--------GSDGNIYAWGYNSSGQLGNNSILNSSVPVLVSTPD 99
Query: 184 ---FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
F Q S A + + GS + + +G +G+LG+GT+ + V
Sbjct: 100 GVTFTQVSAGADHSLAVGS----------------DGNAYAWGRNTDGRLGNGTSTGSSV 143
Query: 241 PEQVKE--LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
P V +P V + V G FH+ V S GD++SWG + L +L +
Sbjct: 144 PLLVSAGAVPSGVTISQVMAGGFHSLAVGSNGDIYSWGYNRSGQLGDGTTLASSV----- 198
Query: 299 SPILIS-GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
P+ +S G P G F QV+ G H++ + +G K ++WG R G LG G A
Sbjct: 199 -PLKVSAGAVPAGVTFS---QVSAGDRHSLAIGSNG-KTYAWGEARGGQLGIGSISRTPA 253
Query: 358 PAIVLWP 364
PA+V P
Sbjct: 254 PALVSAP 260
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 26/181 (14%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A + V AG + SLA+ + G + WGN DS G + SS P V G V
Sbjct: 261 AGVSFTQVSAGDLHSLAVGSDGKAYAWGNN---DSGQLGNATTTSSLAPVLVSPMGGLAV 317
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+V+ G++H +A+ G D Y+WG N NGQLG + P ++ +P
Sbjct: 318 TQVSAGADHSLAI--------GADGNAYAWGLNVNGQLGNNTITTSTVPVMVT-----AP 364
Query: 190 WAVY--EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V + G H+ LT N +T+G GQLG+GT+ +LVP +
Sbjct: 365 DGVTFTRIEAGGLHS--LTAASDEN------TYTWGANSFGQLGNGTSDGSLVPVAISRF 416
Query: 248 P 248
P
Sbjct: 417 P 417
>gi|350593460|ref|XP_003133446.3| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 4060
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2272 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 2328
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2329 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2377
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 2378 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 2430
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2431 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 2482
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 2483 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 2528
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 128/296 (43%), Gaps = 46/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3266 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 3322
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK+++
Sbjct: 3323 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVDALQGHR--- 3371
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 3372 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 3422
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 3423 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 3470
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++WG G LG G T P +V
Sbjct: 3471 QGLQGKKV---IAIATGSLHCVCCTEDGS--YTWGDNDEGQLGDGTTNAIQRPRLV 3521
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 2301 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 2342
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 2343 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 2397
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2398 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2447
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 2448 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 2501
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 2502 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 2547
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2223 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 2276
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 2277 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 2325
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 2326 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 2376
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 2377 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 2427
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2428 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2476
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3172 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 3228
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3229 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3279
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3280 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 3330
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 3331 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVDALQGH-----RVVDVACGS 3379
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3380 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3407
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2432 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2488
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 2489 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 2537
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 2538 RVACGSSHSVAWT 2550
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 24/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 3379 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 3435
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 3436 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 3484
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T E +T+G + GQLG GTT + P V L Q + V C
Sbjct: 3485 SLHCVCCT---------EDGSYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKVNRVAC 3534
Query: 259 GLFHT 263
G HT
Sbjct: 3535 GSAHT 3539
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 59/142 (41%), Gaps = 23/142 (16%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 3413 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 3469
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V G Y+WG N+ GQLG G + RP++
Sbjct: 3470 VQGLQGKKVIAIATGSLHCVCCTEDGS---------YTWGDNDEGQLGDGTTNAIQRPRL 3520
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 3521 VAALQGKK---VNRVACGSAHT 3539
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3182 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TAD 3230
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 3231 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 3289
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ I + V VA G AH+ VT
Sbjct: 3290 WGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAA 3336
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G L++WG+GR G LG + D P +V
Sbjct: 3337 G-DLYTWGKGRYGRLGHSDSEDQLKPKLV 3364
>gi|332233500|ref|XP_003265940.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Nomascus leucogenys]
Length = 1024
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 99/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNEFGQLGLGHTESKDYPSLIEALDNQE---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL
Sbjct: 246 EFLACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGN-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 114/238 (47%), Gaps = 40/238 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNEFGQLGLGHTESKDYPSLIEAL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-- 304
Q V ++ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQEVEFLA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 305 -GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
GN Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGN--------RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLIPLPV 342
>gi|301787735|ref|XP_002929284.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC2-like
[Ailuropoda melanoleuca]
Length = 4837
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4042 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4098
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4099 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4147
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4148 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4198
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4199 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4246
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4247 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4298
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V ++K+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3052
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3053 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3101
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3102 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3152
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3203
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3204 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4094 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4147
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4148 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4198
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4199 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4249
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4250 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4301
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4302 --QGKKVN---RVACGSAHTL 4317
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3948 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4004
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4005 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4055
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4056 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4106
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4107 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 4155
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4156 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4183
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4189 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4245
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4246 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4297
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4298 VAALQGKK---VNRVACGSAHT 4316
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3958 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3995
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3996 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4054
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4055 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4101
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4102 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4140
Score = 45.4 bits (106), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|426220634|ref|XP_004004519.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ovis aries]
Length = 4836
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGTEVVD 4097
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4098 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4146
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4147 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4197
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4245
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V ++DG ++++WG G LG G T P +V
Sbjct: 4246 QGLQGKKV---IAIATGSLHCVCCSEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3052
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3053 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3101
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3102 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3152
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3153 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3203
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3204 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 111/260 (42%), Gaps = 42/260 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
++ V AGG S + AG L+ WG L S +E P V GH V
Sbjct: 4094 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHRV 4147
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4148 VDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TG 4198
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4199 LGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-Q 4249
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNG 307
++++ G H S G+V++WG E LG ++ R P L++
Sbjct: 4250 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL- 4300
Query: 308 PHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4301 -QGKKVN---RVACGSAHTL 4316
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4003
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4004 ADGK--------LYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4054
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHS 4105
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4106 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 4154
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4155 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4182
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4244
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4245 VQGLQGKKVIAIATGSLHCVCCSEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4296
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4297 VAALQGKK---VNRVACGSAHT 4315
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3957 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TAD 4005
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 4006 GKLYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 4064
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + + L P +I + + V VA G AH+ VT G
Sbjct: 4065 WGEAE------DGKLGHGNRSPCDRPRVI-----ESLRGTEVVDVAAGGAHSACVTAAG- 4112
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG + D P +V
Sbjct: 4113 DLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 45.4 bits (106), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|196004949|ref|XP_002112341.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
gi|190584382|gb|EDV24451.1| hypothetical protein TRIADDRAFT_56257 [Trichoplax adhaerens]
Length = 794
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 136/298 (45%), Gaps = 48/298 (16%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFTPSPVWDFHGH 127
P KI V AG +LA+ ++ L+ +G +EG P+ +
Sbjct: 86 PEKITHVAAGRFHTLAVTDSNKLYSFG------QGSEGALGHGDETDLNMPTSIESLEDK 139
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V +ACG H A+ GE Y WG+N+ GQLGL + ++ P ++ D
Sbjct: 140 DVNIIACGGYHSAAITKNGE--------LYIWGSNSEGQLGLKN-DTISYPTML-----D 185
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV--PEQVK 245
+V V CG +HTA++T + +TFG E G+LG G ++ V P+ VK
Sbjct: 186 LGKSVISVACGYYHTAVVT--------ADGKLYTFGETEGGKLGLGDIEAHKVTKPKVVK 237
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ V V V CG HT ++++G V+++G + L + + D+ P L+
Sbjct: 238 GISGKV--VKVACGGNHTVALTASGQVYTFGSGQNGQLGLGSKIM-----DSNIPKLVEA 290
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT--IDFFAPAIV 361
K +ACG +HT +V+D G +L+++G GR G LG G + F P V
Sbjct: 291 LSKRKIK-----HIACGESHTAVVSDKG-ELFTFGDGRHGKLGQGDESFSNLFKPVKV 342
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 129/324 (39%), Gaps = 92/324 (28%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
I GA++ +G D+ T + W V +ACG EH V + G
Sbjct: 8 IPETGAVFTFGKSRFGDNRT------------NKFW-IRSDKVTDIACGDEHTVVVTENG 54
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+++G N GQLG+G ++R +P ++ P + V G FHT +T
Sbjct: 55 R--------LFTFGNNEWGQLGIGSNKTRNKPTTVKAL---KPEKITHVAAGRFHTLAVT 103
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ----------------- 249
+ ++FG G G LGHG +P ++ L
Sbjct: 104 DSNK--------LYSFGQGSEGALGHGDETDLNMPTSIESLEDKDVNIIACGGYHSAAIT 155
Query: 250 -----YVY--------------------------LVSVDCGLFHTSVVSSAGDVWSWGME 278
Y++ ++SV CG +HT+VV++ G ++++G
Sbjct: 156 KNGELYIWGSNSEGQLGLKNDTISYPTMLDLGKSVISVACGYYHTAVVTADGKLYTFGET 215
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+G L L EA P ++ G V+VACG HTV +T G ++++
Sbjct: 216 EGGKL----GLGDIEAHKVTKPKVVKGISGK------VVKVACGGNHTVALTASG-QVYT 264
Query: 339 WGRGRSGVLGTG-KTIDFFAPAIV 361
+G G++G LG G K +D P +V
Sbjct: 265 FGSGQNGQLGLGSKIMDSNIPKLV 288
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 98/213 (46%), Gaps = 39/213 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG------FSLVSSFTPSPVWDFHGH 127
+ SV G + + G L+ +G TEGG P V G
Sbjct: 190 VISVACGYYHTAVVTADGKLYTFG-------ETEGGKLGLGDIEAHKVTKPKVVKGISGK 242
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFN 185
VVKVACG H VAL ++G+ Y++G+ NGQLGLG + +S + PK++E
Sbjct: 243 -VVKVACGGNHTVALTASGQ--------VYTFGSGQNGQLGLGSKIMDSNI-PKLVEAL- 291
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG--TTQSALVPEQ 243
S + + CG HTA+++ + +TFG G +G+LG G + + P +
Sbjct: 292 --SKRKIKHIACGESHTAVVSDK--------GELFTFGDGRHGKLGQGDESFSNLFKPVK 341
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
V+ L +++ L + CG HT V + D + G
Sbjct: 342 VQRLKEFIVL-HIACGGCHTIVACNKIDKLANG 373
>gi|440911989|gb|ELR61602.1| E3 ubiquitin-protein ligase HERC2 [Bos grunniens mutus]
Length = 4835
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3046 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3102
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3103 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3151
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3152 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3204
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3205 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3256
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3257 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3302
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ +V +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4040 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGTEVVD 4096
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4097 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4145
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4146 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4196
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4197 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4244
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V ++DG ++++WG G LG G T P +V
Sbjct: 4245 QGLQGKKV---IAIATGSLHCVCCSEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4296
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3075 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3116
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3117 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3171
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3172 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3221
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3222 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3275
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3276 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3321
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2997 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3050
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3051 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3099
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3100 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3150
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3151 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3201
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3202 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3250
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 111/260 (42%), Gaps = 42/260 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
++ V AGG S + AG L+ WG L S +E P V GH V
Sbjct: 4093 EVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHRV 4146
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4147 VDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---TG 4197
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L Q
Sbjct: 4198 LGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL-Q 4248
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNG 307
++++ G H S G+V++WG E LG ++ R P L++
Sbjct: 4249 GKKVIAIATGSLHCVCCSEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL- 4299
Query: 308 PHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4300 -QGKKVN---RVACGSAHTL 4315
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3946 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4002
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4003 ADGK--------LYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4053
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + +V V G H+
Sbjct: 4054 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDVAAGGAHS 4104
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4105 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 4153
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4154 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4181
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3206 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3262
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3263 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3311
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3312 RVACGSSHSVAWT 3324
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4187 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4243
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4244 VQGLQGKKVIAIATGSLHCVCCSEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4295
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4296 VAALQGKK---VNRVACGSAHT 4314
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 87/207 (42%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3956 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TAD 4004
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 4005 GKLYATGYGAGGRLGVGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 4063
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + + L P +I + + V VA G AH+ VT G
Sbjct: 4064 WGEAE------DGKLGHGNRSPCDRPRVI-----ESLRGTEVVDVAAGGAHSACVTAAG- 4111
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG+GR G LG + D P +V
Sbjct: 4112 DLYTWGKGRYGRLGHSDSEDQLKPKLV 4138
Score = 45.4 bits (106), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|432118039|gb|ELK37976.1| E3 ubiquitin-protein ligase HERC2 [Myotis davidii]
Length = 4285
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2751 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 2807
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2808 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2856
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ VP+ ++ L
Sbjct: 2857 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL-NGQ 2909
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2910 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 2961
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 2962 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3007
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS--VVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG V+ G VWSWG L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQPLAVTDNGQVWSWGDGD------YGKL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ +V +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSVALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 2780 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 2821
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 2822 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 2876
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 2877 ----LVFSWGDGDFGKLGRGGSEGCNVPQNIERLNGQ---GVCQIECGAQFSLALTK--- 2926
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 2927 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 2980
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 2981 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3026
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P V + V KVA
Sbjct: 2702 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGMSSGTVPIPRQVTALSSYVVKKVAVH 2757
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 2758 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 2806
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 2807 DIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 2857
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 2858 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQN---------IERLNG 2908
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2909 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 2955
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 136/333 (40%), Gaps = 51/333 (15%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DG+L +G + + ++ AP LE + I+ +V +GG LA+ + G
Sbjct: 3682 DGKLYATGYGAGGRLGVGGTESVSAPTLLE----SIQHVFIRKVAVNSGGKHCLALSSEG 3737
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG + G + P V G VV +A G H + SAG+
Sbjct: 3738 EVYSWGEA---EDGKLGHGNRSPCDRPRVVESLRGTEVVDIAAGGAHSACVTSAGD---- 3790
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS--FHTALLTHRK 209
Y+WG G+LG D E +L+PK++E V +V CGS T LT
Sbjct: 3791 ----LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR---VVDVACGSGDAQTLCLTD-- 3841
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-S 268
+ W++G G+ G+LG G + VP +V +S+ G T S
Sbjct: 3842 ------DDTVWSWGDGDYGKLGRGGSDGCKVPMKVP--------LSLRVGRPSTPPPSWP 3887
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
DV G LG + + R P + G G K + +A G+ H V
Sbjct: 3888 RLDVGGKGDYHRLGHGSDDHVRR--------PRQV--QGLQGKKV---IAIATGSLHCVC 3934
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T++G ++++WG G LG G T P +V
Sbjct: 3935 CTEEG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 3966
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3624 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3680
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 3681 ADGK--------LYATGYGAGGRLGVGGTESVSAPTLLESIQHVFIRKVA-VNSGGKHCL 3731
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P V+ L + +V + G H+
Sbjct: 3732 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVVESL-RGTEVVDIAAGGAHS 3782
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V+SAGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 3783 ACVTSAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGS 3831
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3832 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3859
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 2911 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 2967
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y +WG N++GQ G G +P +++ +
Sbjct: 2968 VGALHCLAVTDAGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3016
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3017 RVACGSSHSVAWT 3029
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G LA+ + G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQPLAVTDNGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEALQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GNNDQCQHFDTLHQTKPEP-SLLPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSVGLR 788
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 73/147 (49%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A + VTD+G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQPLAVTDNG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 37/85 (43%), Gaps = 11/85 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V G V+ +A GS H V GE Y +WG N+ GQLG G + R
Sbjct: 3911 PRQVQGLQGKKVIAIATGSLHCVCCTEEGEVY--------TWGDNDEGQLGDGTTNAIQR 3962
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHT 202
P+++ V V CGS HT
Sbjct: 3963 PRLVAALQGRK---VNRVACGSAHT 3984
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 282 GLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L ++ E P +IS +G K V +ACG+ ++ +T +G +L++WG
Sbjct: 527 RLGHGDTVPLEE------PKVISAFSGKQAGKHV--VHIACGSTYSAAITAEG-ELYTWG 577
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
RG G LG G + D P +V
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLV 598
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ +AG ++ WG+ D +G + + P+ V G + +V
Sbjct: 2962 KIVHVAVGALHCLAVTDAGQVYAWGDN---DHGQQGNGTTTVNRKPTLVQGLEGQKITRV 3018
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 3019 ACGSSHSVA 3027
>gi|321470134|gb|EFX81111.1| hypothetical protein DAPPUDRAFT_50378 [Daphnia pulex]
Length = 4502
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 133/292 (45%), Gaps = 35/292 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ + G ++ WG + G + + P + G VV
Sbjct: 3701 VKKVAVNSGGKHCLALSSEGEVYSWGEG---EDGKLGHGNKLPCDRPRIIESLRGKDVVD 3757
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG H A+ + GE Y+WG G+LG GD + +L+PK++E +
Sbjct: 3758 VACGGAHSAAITALGE--------LYTWGKGRYGRLGHGDSDDQLKPKLVEAL---LGYR 3806
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T +T D W++G G+ G+LG G + +P +++ L
Sbjct: 3807 VMDVACGSGDAQTCAIT------DEEGGTVWSWGDGDYGKLGRGGSDGCKIPTKIESL-S 3859
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ ++ V+CG + +S+ G V++WG KG + G + +
Sbjct: 3860 GLGIIKVECGSQFSVALSNNGSVYTWG--KG---------DYHRLGHGVDEHVRRPKKVM 3908
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + + ++ GA H V+ TD G ++++WG G LG G T P +V
Sbjct: 3909 TLQGKKVISISTGALHCVVCTDQG-EVYTWGDNDEGQLGDGTTTGIQKPRLV 3959
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/261 (31%), Positives = 117/261 (44%), Gaps = 46/261 (17%)
Query: 117 TPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
+P + H V KVA G H +AL + G + SWG ++G+LG GD S
Sbjct: 2773 SPHQITALSQHVVRKVAVHSGGRHALALTADGRVF--------SWGEGDDGKLGHGDVTS 2824
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
P+ IE N + V +V GS H+A +T +T+GLGE G+LGHG
Sbjct: 2825 LDTPRCIEALNG---FRVRDVAAGSNHSAAVTSSGE--------LYTWGLGEYGRLGHGD 2873
Query: 235 TQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ L P++V+ L Q V VS T + G V+SWG + G L R
Sbjct: 2874 NLTQLTPKRVESLVGQRVVQVSCGSRDAQTLALVEGGLVYSWG-DGDFG-----KLGRGG 2927
Query: 294 AGDAISPILI---SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ SP L+ SG G V CGA +V +T +G+ +++WG+G LG G
Sbjct: 2928 SEGCSSPCLVDKLSGLG--------VCHVECGAQFSVALTCNGH-VYTWGKGDYFRLGHG 2978
Query: 351 KTIDFFAPAIVLWPPLTEEFK 371
+ V WP L E +
Sbjct: 2979 ------SDQHVRWPTLVEGLR 2993
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 131/291 (45%), Gaps = 35/291 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ +V +GG +LA+ G ++ WG D G + S TP + +G V
Sbjct: 2785 VRKVAVHSGGRHALALTADGRVFSWGEG---DDGKLGHGDVTSLDTPRCIEALNGFRVRD 2841
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA GS H A+ S+GE Y+WG G+LG GD ++L PK +E+
Sbjct: 2842 VAAGSNHSAAVTSSGE--------LYTWGLGEYGRLGHGDNLTQLTPKRVESLVGQR--- 2890
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLE-SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V+CGS L ++E + +++G G+ G+LG G ++ P V +L
Sbjct: 2891 VVQVSCGSRDAQTLA-------LVEGGLVYSWGDGDFGKLGRGGSEGCSSPCLVDKL-SG 2942
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ + V+CG + ++ G V++WG KG L P L+ G G
Sbjct: 2943 LGVCHVECGAQFSVALTCNGHVYTWG--KG----DYFRLGHGSDQHVRWPTLV--EGLRG 2994
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + V+ GA H + VTD G ++++WG G G G P +V
Sbjct: 2995 KKV---IGVSVGALHCLAVTDAG-QVFAWGDNDHGQQGNGSITVNRRPTLV 3041
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ QLG G + S+++ P+ ++ P V GS L+T +
Sbjct: 2701 YVWGLNDKEQLG-GPKGSKIKVPQAVDWTVSLQP---ISVAGGSKSLFLVTQSGK----- 2751
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWS 274
+ G G NG+LG G +++ P Q+ L Q+V V+V G H +++ G V+S
Sbjct: 2752 ---AYACGEGSNGRLGLGHSRNVNSPHQITALSQHVVRKVAVHSGGRHALALTADGRVFS 2808
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG E G + +T + I + +G + +D VA G+ H+ VT G
Sbjct: 2809 WG-EGDDGKLGHGDVTSLDTPRCIEAL-------NGFRVRD---VAAGSNHSAAVTSSG- 2856
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG G G LG G + P V
Sbjct: 2857 ELYTWGLGEYGRLGHGDNLTQLTPKRV 2883
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P + E + P ++ G +T R
Sbjct: 3617 YGWGHNHRGQLGGVEGAKVKVPTVCEALSALRP---IQLAGGEQTLFAITSDGR------ 3667
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G +S VP ++ L Q+V++ V+V+ G H +SS G+V+S
Sbjct: 3668 --VYATGYGAGGRLGIGGAESVTVPSLLESL-QHVFVKKVAVNSGGKHCLALSSEGEVYS 3724
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + + L P +I + +D V VACG AH+ +T G
Sbjct: 3725 WGEGE------DGKLGHGNKLPCDRPRII-----ESLRGKDVVDVACGGAHSAAITALG- 3772
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG+GR G LG G + D P +V
Sbjct: 3773 ELYTWGKGRYGRLGHGDSDDQLKPKLV 3799
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + +K + + I V+ G S+A+ N G+++ WG D G
Sbjct: 3844 GGSDGCKIPTKIESLSGLGIIKVECGSQFSVALSNNGSVYTWGKG---DYHRLGHGVDEH 3900
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ ++ G+ H V GE Y +WG N+ GQLG G
Sbjct: 3901 VRRPKKVMTLQGKKVISISTGALHCVVCTDQGEVY--------TWGDNDEGQLGDGTTTG 3952
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+P+++ + V+CGS HT
Sbjct: 3953 IQKPRLVAALQNKK---INRVSCGSAHT 3977
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 76/181 (41%), Gaps = 33/181 (18%)
Query: 33 GQLGFSGSNSLV-PCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS PC++++ +G +C V+ G S+A+ G
Sbjct: 2921 GKLGRGGSEGCSSPCLVDKLSGLG------------------VCHVECGAQFSVALTCNG 2962
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G S P+ V G V+ V+ G+ H +A+ AG+ +
Sbjct: 2963 HVYTWGKG---DYFRLGHGSDQHVRWPTLVEGLRGKKVIGVSVGALHCLAVTDAGQVF-- 3017
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+WG N++GQ G G RP +++ + + V CGS H+ T + P
Sbjct: 3018 ------AWGDNDHGQQGNGSITVNRRPTLVQGIDG---IKITRVACGSSHSVAWTAPEPP 3068
Query: 212 N 212
+
Sbjct: 3069 S 3069
>gi|410960764|ref|XP_003986957.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like isoform 2 [Felis
catus]
Length = 4844
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3055 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3111
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3112 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3160
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3161 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3213
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3214 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3265
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3266 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3311
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4049 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4105
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4106 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHH--- 4154
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4155 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4205
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4206 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4253
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4254 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4305
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPVLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3084 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3125
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3126 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3180
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3181 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3230
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3231 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3284
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3285 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3330
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 3006 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3059
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3060 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3108
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3109 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3159
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3160 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3210
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3211 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3259
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4101 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHH 4154
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4155 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4206 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4256
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4257 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4308
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4309 --QGKKVN---RVACGSAHTL 4324
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3955 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4011
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4012 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4062
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4063 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4113
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 4114 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----HVVDVACGS 4162
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4163 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4190
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3215 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3271
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3272 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3320
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3321 RVACGSSHSVAWT 3333
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4196 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4252
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4253 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4304
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4305 VAALQGKK---VNRVACGSAHT 4323
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPVLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3965 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 4002
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 4003 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4061
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4062 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4108
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4109 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4147
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPVLV 598
>gi|403263471|ref|XP_003924055.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Saimiri boliviensis
boliviensis]
Length = 1024
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 98/205 (47%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLSGIPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGL ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNEFGQLGLDHTESKDSPSLIEALDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG HTALLT + + +TFG G++GQLGH +TQ+ L P V EL
Sbjct: 246 EFLACGGSHTALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGN-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 112/235 (47%), Gaps = 40/235 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL--- 188
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
S + +++ G H+ L+ + +++G E GQLG T+S P ++ L
Sbjct: 189 SGIPLAQISAGEAHSMALS--------MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEAL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-- 304
Q V ++ CG HT++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFLA--CGGSHTALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 305 -GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
GN Q+ACG HT+ D K++S+G G+ G LG G T D P
Sbjct: 293 AGN--------RVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339
>gi|3414809|gb|AAC31431.1| rjs [Mus musculus]
Length = 4836
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CG+ L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGTRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4097
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4098 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4146
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + + VP ++ L
Sbjct: 4147 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSL-T 4197
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4245
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4246 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 534
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLGH 586
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 587 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 639
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 640 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 691
Query: 349 TG 350
G
Sbjct: 692 LG 693
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3055 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGTRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACG+ L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGTRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4146
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4147 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGSKVPMKIDSL---T 4197
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4198 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4248
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4249 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4300
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4301 --QGKKVN---RVACGSAHTL 4316
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4004 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4054
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4105
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4106 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4154
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4155 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4182
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 80/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LGLG E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGLGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDSKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS+ S VP I+ +G + V+ G S+A+ +G
Sbjct: 4177 GKLGRGGSDGSKVPMKIDSLTGLG------------------VVKVECGSQFSVALTKSG 4218
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
A++ WG D G S P V G V+ +A GS H V GE
Sbjct: 4219 AVYTWGKG---DYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--- 4272
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
Y+WG N+ GQLG G + RP+++ V V CGS HT
Sbjct: 4273 -----YTWGDNDEGQLGDGTTNAIQRPRLVAALQGKK---VNRVACGSAHT 4315
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3957 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3994
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4053
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4100
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4101 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|195432783|ref|XP_002064396.1| GK20144 [Drosophila willistoni]
gi|194160481|gb|EDW75382.1| GK20144 [Drosophila willistoni]
Length = 4996
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 140/299 (46%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 3110 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVEALRAK 3166
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VACGS H A+ S GE Y+WG G+LG GD ++L+PK +
Sbjct: 3167 KIRDVACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNATQLKPKQVTAL--- 3215
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 3216 AGRRVIQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSATPHEIERL 3269
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ ++ ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 3270 -SGIGVIQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI-- 3318
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3319 -----GGLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3371
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G +V
Sbjct: 4233 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMSVAD 4289
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+G +WG G+LG GD E +LRPK++E +
Sbjct: 4290 IACGSAHSAAITSSGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEALLG---YR 4338
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4339 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4391
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4392 GVIKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4440
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4441 -QGKKI---ISIATGSLHCVACSDAG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4489
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4374 GGSDGCKLPYKIESLAGLGVIKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 4430
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA AGE Y+WG N+ GQLG G +
Sbjct: 4431 VRRPKKVAALQGKKIISIATGSLHCVACSDAGEV--------YTWGDNDEGQLGDGTVTA 4482
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4483 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4521
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 104/226 (46%), Gaps = 33/226 (14%)
Query: 143 VSAGETYKGE-DLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCG 198
S GE+ E +L C WG N+ QLG G + S+++ P +T ++ P ++ G
Sbjct: 3013 TSLGESVAAEQELPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHISGG 3068
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVD 257
S +++ + + G G NG+LG G T + +P Q+ L QYV V+V
Sbjct: 3069 SKSLFIVSQ--------DGKVFACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVH 3120
Query: 258 CGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
G H ++ G V+SWG E G LG +L + +A+ K +D
Sbjct: 3121 SGGKHALALTLDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD 3170
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VACG++H+ ++ G +L++WG G G LG G P V
Sbjct: 3171 ---VACGSSHSAAISSQG-ELYTWGLGEYGRLGHGDNATQLKPKQV 3212
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 72/171 (42%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS S P IE+ IG + ++ G SLA+ AG
Sbjct: 3250 GKLGRGGSEGSATPHEIERLSGIG------------------VIQIECGAQFSLALTRAG 3291
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+W WG D G P P+ G V+ VA G+ H +A+ AG+
Sbjct: 3292 EVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIHVAVGALHCLAVTDAGQV--- 3345
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
Y+WG N++GQ G G+ +P ++ D+ + V V CGS H+
Sbjct: 3346 -----YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF-VNRVACGSSHS 3388
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 130
+ +V G S AI +G L+ WG T G +S P+ V + ++
Sbjct: 668 VKAVFCGCSYSAAITWSGNLYTWGR------GTYGRLGHGNSDDQCVPAIVMALAEYEII 721
Query: 131 KVACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VA GS H + L S G + Y+WG + G+LG G+ S L+P ++ET +
Sbjct: 722 DVALGSGDAHSLCLTSEG--------LVYAWGDGDYGKLGNGNCNSSLQPILVETLPR-- 771
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL----VPEQV 244
V + G+ + LT + G+ LGH + ++ VP V
Sbjct: 772 ---VQRIFAGAQSSMALTTEGH----------LYSWGKASCLGHQQVERSVQGCSVPRLV 818
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
L Q+ LV V G+ H ++S G+V+ WG +CP++
Sbjct: 819 SSL-QHKRLVDVAVGVAHCLALTSCGEVFGWGRNDSQQICPSS 860
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 89/195 (45%), Gaps = 21/195 (10%)
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P+ IE Q++ ++ G A+ ++R +++G GE+ +LGHG T
Sbjct: 602 LEPQPIEELAQETILSIAGHCEGRHFLAIDSNRN---------AYSWGAGEDHRLGHGDT 652
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+ VP ++ L + V +V CG +++ ++ +G++++WG L +
Sbjct: 653 HARAVPTKISALDRCVK--AVFCGCSYSAAITWSGNLYTWGRGT------YGRLGHGNSD 704
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
D P ++ + + D V + G AH++ +T +G +++WG G G LG G
Sbjct: 705 DQCVPAIVMALAEY--EIID-VALGSGDAHSLCLTSEGL-VYAWGDGDYGKLGNGNCNSS 760
Query: 356 FAPAIVLWPPLTEEF 370
P +V P +
Sbjct: 761 LQPILVETLPRVQRI 775
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4149 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4200
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4201 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4255
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4256 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-------------DIACGSAHSAAITS 4302
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4303 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4331
>gi|321474724|gb|EFX85688.1| hypothetical protein DAPPUDRAFT_98215 [Daphnia pulex]
Length = 1052
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 145/298 (48%), Gaps = 46/298 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
I V G +LA + G ++ WG+ +S+ + G ++ S P+P V VV+
Sbjct: 86 ITQVACGAQHTLAQNEWGEVFAWGS----NSNGQLGLNVEESMMPTPKMVKSLATKQVVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPW 190
+ACG H +AL + GE Y WG+N++GQLGLG + +P +++ Q P
Sbjct: 142 IACGRSHSMALTNVGEIY--------CWGSNSHGQLGLGSSGTPETKPCLVKLL-QGIP- 191
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELP 248
+ ++CG+ + +T P+ + +G G+N GQLG G T P Q+K L
Sbjct: 192 -ISHISCGADFSFAVT----PSGAV------YGWGKNSFGQLGLGDTTDRPQPTQLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGN 306
++ + + CG+ HT+ ++ G V+++G M LG C +A+ + + ++
Sbjct: 240 RFQRVTYIRCGMDHTAALTRDGGVFTFGAGMYGQLGHCTSAN-------EMLPRKVLELM 292
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G Q+ CG HT+ +++++G G SG LGT T + +P +V+ P
Sbjct: 293 G------TTVTQICCGRCHTLAFVPSKGRIYAFGLGGSGQLGTKSTANVNSPQLVIGP 344
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 48/290 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I +K G + S +++ G L G+C S PV H + +VA
Sbjct: 47 ILVMKDGKLFSFGLNDYGQL---GHCR-------------SRTRAEPVDGLEAHNITQVA 90
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAV 192
CG++H +A GE ++WG+N+NGQLGL ES + PK++++ + V
Sbjct: 91 CGAQHTLAQNEWGEV--------FAWGSNSNGQLGLNVEESMMPTPKMVKSL---ATKQV 139
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG H+ LT ++ E CW G +GQLG G++ + + +L Q +
Sbjct: 140 VQIACGRSHSMALT------NVGEIYCW--GSNSHGQLGLGSSGTPETKPCLVKLLQGIP 191
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ + CG + V+ +G V+ WG + G L + D P + +
Sbjct: 192 ISHISCGADFSFAVTPSGAVYGWG-KNSFG-----QLGLGDTTDRPQPTQLK-----SLR 240
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
FQ + CG HT +T DG ++++G G G LG + + P VL
Sbjct: 241 FQRVTYIRCGMDHTAALTRDG-GVFTFGAGMYGQLGHCTSANEMLPRKVL 289
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 87/201 (43%), Gaps = 33/201 (16%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA----VYEVTCGSFHTALLTHRKRPN 212
+ WG +G+ + I T + SP+ + +V CG HT L+
Sbjct: 2 FCWGRMKHGE-----LGLGGLEEEIITSPRASPFTLVDDIVQVGCGENHTILV------- 49
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
M + ++FGL + GQLGH +++ P E + V CG HT + G+V
Sbjct: 50 -MKDGKLFSFGLNDYGQLGHCRSRTRAEPVDGLEAHN---ITQVACGAQHTLAQNEWGEV 105
Query: 273 WSWGMEKGLGLCPNASLTRN-EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
++WG N L N E +P ++ + VQ+ACG +H++ +T+
Sbjct: 106 FAWGSNS------NGQLGLNVEESMMPTPKMVKSLAT-----KQVVQIACGRSHSMALTN 154
Query: 332 DGYKLWSWGRGRSGVLGTGKT 352
G +++ WG G LG G +
Sbjct: 155 VG-EIYCWGSNSHGQLGLGSS 174
>gi|194893471|ref|XP_001977881.1| GG19286 [Drosophila erecta]
gi|190649530|gb|EDV46808.1| GG19286 [Drosophila erecta]
Length = 4908
Score = 97.4 bits (241), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 141/299 (47%), Gaps = 41/299 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ +K +V +GG +LA+ G ++ WG + G + + P V
Sbjct: 3066 HQYVVKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVEALRAK 3122
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ VACGS H A+ S GE Y+WG G+LG GD ++L+PK++
Sbjct: 3123 KIRDVACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNVTQLKPKLVVAL--- 3171
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V +V CGS L + + +++G G+ G+LG G ++ + P +++ L
Sbjct: 3172 AGRRVVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL 3225
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILI 303
+ +V ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 3226 -SGIGVVQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI-- 3274
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3275 -----GGLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3327
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G +V
Sbjct: 4132 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMSVAD 4188
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 4189 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEALLG---YR 4237
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4238 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4290
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4291 GVVKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4339
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4340 -QGKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4388
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4273 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 4329
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 4330 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 4381
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4382 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4420
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 2979 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQ- 3033
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3034 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLHQYVVKKVAVHSGGKHALALT 3086
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 3087 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 3133
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ ++ G +L++WG G G LG G + P +V+
Sbjct: 3134 SAAISSQG-ELYTWGLGEYGRLGHGDNVTQLKPKLVV 3169
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 3228 IGVVQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIH 3284
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ +
Sbjct: 3285 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF- 3333
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 3334 VNRVACGSSHS 3344
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 115/265 (43%), Gaps = 36/265 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV G S AI G L WG + G + P+ V H VV VA
Sbjct: 667 VQSVYCGCSYSAAITCGGNLLTWGRG---TYARLGHGNSDDRSLPTLVVALSDHMVVDVA 723
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
GS H +AL S G + ++WG + G+LG G+ L+P ++E+ +
Sbjct: 724 LGSGDAHSLALTSEG--------LVFAWGDGDYGKLGNGNCNGSLQPILVESLPR----- 770
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V GS + L+ + ++ C LG QL + Q VP V L Q+
Sbjct: 771 VQRVFAGSQFSLALSSEGQLYSWGKATC----LGH--QLVERSVQGCSVPRLVSSL-QHK 823
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V V + H +SS+G+V+ WG +CP AS++ +PIL+S P
Sbjct: 824 RIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP-ASVSSEPL--LRTPILVS-----LP 875
Query: 312 KFQDPVQ-VACGAAHTVLVTDDGYK 335
F P +AC +A +++ T ++
Sbjct: 876 TF--PASGIACTSAQSLVWTQSSHQ 898
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 69/142 (48%), Gaps = 11/142 (7%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++ ++ G++ +WG
Sbjct: 635 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVYCGCSYSAAITCGGNLLTWGRGT 693
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
A L + D P L+ H V + G AH++ +T +G +++W
Sbjct: 694 ------YARLGHGNSDDRSLPTLVVALSDH---MVVDVALGSGDAHSLALTSEGL-VFAW 743
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G G LG G P +V
Sbjct: 744 GDGDYGKLGNGNCNGSLQPILV 765
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 44/232 (18%)
Query: 118 PSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P+ + + +A C H +A+ S Y SWG + +LG GD +R
Sbjct: 602 PLPMEEVAHEVFISIAGHCEGRHFLAIDSNHNAY--------SWGTGEDHRLGHGDTHAR 653
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P I Q +VY CG ++A +T T+G G +LGHG +
Sbjct: 654 AVPTKIAALEQHCVQSVY---CGCSYSAAIT--------CGGNLLTWGRGTYARLGHGNS 702
Query: 236 QSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
+P V L ++ + V++ G H+ ++S G V++WG + G G C N SL
Sbjct: 703 DDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC-NGSL- 760
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
PIL+ P+ Q +V G+ ++ ++ +G +L+SWG+
Sbjct: 761 --------QPILVESL----PRVQ---RVFAGSQFSLALSSEG-QLYSWGKA 796
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4048 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4099
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4100 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4154
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4155 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-------------DIACGSAHSAAITA 4201
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4202 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4230
>gi|156740286|ref|YP_001430415.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
gi|156231614|gb|ABU56397.1| regulator of chromosome condensation RCC1 [Roseiflexus castenholzii
DSM 13941]
Length = 792
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 93/313 (29%), Positives = 132/313 (42%), Gaps = 54/313 (17%)
Query: 60 LEDDSKTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWMWG---NCPLPD-SSTEG 108
L D + T+ P+ + ++ AGG + A+ ++G +W WG + L D ++T+
Sbjct: 456 LGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGRNSSGQLGDGTTTDR 515
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G + S PS V +A G H AL S+G ++C WGAN +GQLG
Sbjct: 516 GTPVAVSGLPSEV--------TAIASGGVHTCALTSSG------GVMC--WGANWSGQLG 559
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G +R P + P V + G HT LT W +G +G
Sbjct: 560 DGTTTARSTPVAVSGL----PSGVMAIAAGDLHTCALTS--------SGGVWCWGANSSG 607
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG GTT + P V LP V ++ G FHT ++S+G VW WG +
Sbjct: 608 QLGDGTTTARSTPVAVSGLPSGVTAIAA--GSFHTCALTSSGGVWCWGANW------SGQ 659
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
L D+ +P+ +SG P G +A G HT T G +W W R G LG
Sbjct: 660 LGDGSYTDSSTPVAVSGL-PSGVT-----AIAAGRFHTCARTGSG-GVWCWASNRYGQLG 712
Query: 349 TGKTIDFFAPAIV 361
G D P V
Sbjct: 713 DGSYTDSSTPVAV 725
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 129/303 (42%), Gaps = 54/303 (17%)
Query: 60 LEDDSKTNHKAPI-------KICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGG 109
L D + T+ P+ ++ ++ +GG+ + A+ ++G + WG + L D +T
Sbjct: 507 LGDGTTTDRGTPVAVSGLPSEVTAIASGGVHTCALTSSGGVMCWGANWSGQLGDGTTTAR 566
Query: 110 FSLVS-SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ V+ S PS V + +A G H AL S+G + WGAN++GQLG
Sbjct: 567 STPVAVSGLPSGV--------MAIAAGDLHTCALTSSGGVW--------CWGANSSGQLG 610
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G +R P + P V + GSFHT LT W +G +G
Sbjct: 611 DGTTTARSTPVAVSGL----PSGVTAIAAGSFHTCALTS--------SGGVWCWGANWSG 658
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG G+ + P V LP V ++ G FHT + +G VW W + G + S
Sbjct: 659 QLGDGSYTDSSTPVAVSGLPSGVTAIAA--GRFHTCARTGSGGVWCWASNR-YGQLGDGS 715
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
T D+ +P+ +SG +A G HT T G + WG SG LG
Sbjct: 716 YT-----DSSTPVAVSG------LVSGVTAIAAGVVHTCARTSSGGVM-CWGANSSGQLG 763
Query: 349 TGK 351
G+
Sbjct: 764 DGR 766
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/312 (28%), Positives = 122/312 (39%), Gaps = 52/312 (16%)
Query: 60 LEDDSKTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGG 109
L D + T+ P+ + ++ AGG + A+ ++G +W WG+ L D +T
Sbjct: 201 LGDGTTTDRSTPVAVSGLGSGVTAIAAGGSHTCALMSSGGVWCWGDNWSGQLGDGTTT-- 258
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
TP V V +A G H A S+G ++C WGAN +GQLG
Sbjct: 259 ----DRSTPVAVSGLA-SGVTAIAAGGFHTCARTSSG------GVMC--WGANWSGQLGD 305
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G +R P + V + G HT LT W +G GQ
Sbjct: 306 GTTTARSTPVAVSGLAS----GVTAIAAGDSHTCALTS--------SGGVWCWGYNFFGQ 353
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GTT P V L V ++ G FHT + S+G V WG K L +
Sbjct: 354 LGDGTTTDRSTPVAVSGLGSGVTAIAA--GDFHTCALMSSGGVRCWGRNKDGQLGDGTTT 411
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
TR+ +P+ +SG +A G HT T G + WG SG LG
Sbjct: 412 TRS------TPVAVSG------LVSGVTAIAAGDDHTCARTSSGGVM-CWGDNWSGQLGD 458
Query: 350 GKTIDFFAPAIV 361
G T D P V
Sbjct: 459 GTTTDRSTPVAV 470
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 120/314 (38%), Gaps = 56/314 (17%)
Query: 60 LEDDSKTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGG 109
L D + T P+ + ++ AG + A+ ++G +W WG L D +T
Sbjct: 303 LGDGTTTARSTPVAVSGLASGVTAIAAGDSHTCALTSSGGVWCWGYNFFGQLGDGTTT-- 360
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
TP V G V +A G H AL+S+G + C WG N +GQLG
Sbjct: 361 ----DRSTPVAVSGL-GSGVTAIAAGDFHTCALMSSG------GVRC--WGRNKDGQLGD 407
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN-- 227
G +R P + V + G HT T MCW G+N
Sbjct: 408 GTTTTRSTPVAVSGLVS----GVTAIAAGDDHTCARTSSGGV------MCW----GDNWS 453
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
GQLG GTT P V L V ++ G HT + S+G VW WG +
Sbjct: 454 GQLGDGTTTDRSTPVAVSGLGSGVTAIAA--GGSHTCALMSSGGVWCWGRNS------SG 505
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
L D +P+ +SG + +A G HT +T G + WG SG L
Sbjct: 506 QLGDGTTTDRGTPVAVSG------LPSEVTAIASGGVHTCALTSSGGVM-CWGANWSGQL 558
Query: 348 GTGKTIDFFAPAIV 361
G G T P V
Sbjct: 559 GDGTTTARSTPVAV 572
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 96/251 (38%), Gaps = 46/251 (18%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
SSF+P G V +A G H AL S+G ++C WG N GQLG G
Sbjct: 60 TSSFSP-----LQG--VTAIAAGGAHTCALTSSG------GVMC--WGRNGFGQLGDGTT 104
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQL 230
R P + V + G HT L MCW G+N GQL
Sbjct: 105 TDRSTPVAVSGLTS----GVTAIAAGYAHTCALMSSGGV------MCW----GDNWSGQL 150
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GTT P V L V ++ G HT +S+G V WG + L
Sbjct: 151 GDGTTTDRSTPVAVSGLASGVTAIAA--GDDHTCARTSSGGVMCWGDNW------SGQLG 202
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
D +P+ +SG G +A G +HT + G +W WG SG LG G
Sbjct: 203 DGTTTDRSTPVAVSGLG------SGVTAIAAGGSHTCALMSSG-GVWCWGDNWSGQLGDG 255
Query: 351 KTIDFFAPAIV 361
T D P V
Sbjct: 256 TTTDRSTPVAV 266
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 85/302 (28%), Positives = 117/302 (38%), Gaps = 50/302 (16%)
Query: 66 TNHKAPIK-ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPV 121
T+ +P++ + ++ AGG + A+ ++G + WG L D +T TP V
Sbjct: 60 TSSFSPLQGVTAIAAGGAHTCALTSSGGVMCWGRNGFGQLGDGTTT------DRSTPVAV 113
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
V +A G H AL+S+G ++C WG N +GQLG G R P +
Sbjct: 114 SGLT-SGVTAIAAGYAHTCALMSSG------GVMC--WGDNWSGQLGDGTTTDRSTPVAV 164
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSAL 239
V + G HT T MCW G+N GQLG GTT
Sbjct: 165 SGLAS----GVTAIAAGDDHTCARTSSGGV------MCW----GDNWSGQLGDGTTTDRS 210
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
P V L V ++ G HT + S+G VW WG + L D +
Sbjct: 211 TPVAVSGLGSGVTAIAA--GGSHTCALMSSGGVWCWGDNW------SGQLGDGTTTDRST 262
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+ +SG +A G HT T G + WG SG LG G T P
Sbjct: 263 PVAVSG------LASGVTAIAAGGFHTCARTSSGGVM-CWGANWSGQLGDGTTTARSTPV 315
Query: 360 IV 361
V
Sbjct: 316 AV 317
>gi|410957260|ref|XP_003985249.1| PREDICTED: LOW QUALITY PROTEIN: E3 ISG15--protein ligase HERC5
[Felis catus]
Length = 1143
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 71/211 (33%), Positives = 101/211 (47%), Gaps = 31/211 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHTV 129
I + G SLA+ G L+ WG + G + S F P V + G +
Sbjct: 258 IIQITCGDYHSLALSKGGELFAWGQ------NLHGQLGIGSQFASIAIPQIVENLSGIPL 311
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V+++ G H +AL +G YSWG N+ GQLGLG + + P +IE +
Sbjct: 312 VQISAGKAHSMALSMSGN--------IYSWGRNDFGQLGLGHTDGKDFPSLIEALDNQK- 362
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + CG HTALLT + + +TFG G++GQLGH +TQ+ L P V EL
Sbjct: 363 --VEFLACGGSHTALLTK--------DGLVFTFGAGKHGQLGHNSTQNELRPRLVTELAG 412
Query: 250 YVYLVSVDCGLFHT-SVVSSAGDVWSWGMEK 279
+ + CG HT + VS G V+S+G K
Sbjct: 413 N-RVTQIACGRQHTLAYVSDLGKVFSFGSGK 442
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 40/241 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + + + P+I+E
Sbjct: 258 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGIGSQFASIAIPQIVENL--- 306
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
S + +++ G H+ L+ + +++G + GQLG G T P ++ L
Sbjct: 307 SGIPLVQISAGKAHSMALS--------MSGNIYSWGRNDFGQLGLGHTDGKDFPSLIEAL 358
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-- 304
Q V ++ CG HT++++ G V+++G K + L N + + P L++
Sbjct: 359 DNQKVEFLA--CGGSHTALLTKDGLVFTFGAGK------HGQLGHNSTQNELRPRLVTEL 410
Query: 305 -GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
GN Q+ACG HT+ D K++S+G G+ G LG G T + P +
Sbjct: 411 AGN--------RVTQIACGRQHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKL 462
Query: 364 P 364
P
Sbjct: 463 P 463
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 68/143 (47%), Gaps = 20/143 (13%)
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPN-ASLTRNEAGDAISPILISG 305
Q ++ + CG +H+ +S G++++WG + LG+ AS+ + + +S I +
Sbjct: 254 QEKXIIQITCGDYHSLALSKGGELFAWGQNLHGQLGIGSQFASIAIPQIVENLSGIPL-- 311
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
VQ++ G AH++ ++ G ++SWGR G LG G T P+++
Sbjct: 312 -----------VQISAGKAHSMALSMSG-NIYSWGRNDFGQLGLGHTDGKDFPSLI---E 356
Query: 366 LTEEFKQDELNTGGLDDEIKTKD 388
+ K + L GG + TKD
Sbjct: 357 ALDNQKVEFLACGGSHTALLTKD 379
>gi|195999218|ref|XP_002109477.1| hypothetical protein TRIADDRAFT_21647 [Trichoplax adhaerens]
gi|190587601|gb|EDV27643.1| hypothetical protein TRIADDRAFT_21647, partial [Trichoplax
adhaerens]
Length = 330
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 121/263 (46%), Gaps = 37/263 (14%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G ++ WG L G +L S F P + F V+ ++C H A+ S T
Sbjct: 52 GKVYSWG---LGKYGILGQGNLRSRFAPLKIASFKSSNVIDISCHELHAAAVTSVTNTGS 108
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
YS+G N+N QLG+GD E P+++ N ++ + +V CG +H+A L+ +
Sbjct: 109 -----VYSFGDNSNSQLGVGDTEPYAEPQLVTVLNDEN---IIKVACGKYHSAALSAKGN 160
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ +GLG++GQLG G + P + + ++ V CG HT +++ G
Sbjct: 161 --------LFLWGLGDDGQLGLGNYNLSTEPTILHIGEKKAKVMDVACGDLHTCILTVGG 212
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP---VQVACGAAHTV 327
V+++G N G +P + + P+ F V V+CG+ H+
Sbjct: 213 LVYAFG--------------SNIYGQIAAPSMNKFHLPYRISFNTSKRFVSVSCGSFHSA 258
Query: 328 LVTDDGYKLWSWGRGRSGVLGTG 350
+T++G KL++WG G LG G
Sbjct: 259 AITENG-KLYAWGLETDGRLGLG 280
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 88/198 (44%), Gaps = 26/198 (13%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG+ NG LG G+ P+++E + + + CG HT + + +
Sbjct: 2 YTWGSGINGALGHGEDIDIPSPRVVEAL---LAYNIKRLACG-LHTVFALNAE------D 51
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA---GDVW 273
+++GLG+ G LG G +S P ++ + ++ + C H + V+S G V+
Sbjct: 52 GKVYSWGLGKYGILGQGNLRSRFAPLKIASF-KSSNVIDISCHELHAAAVTSVTNTGSVY 110
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
S+G N+ L + P L++ ++ ++VACG H+ ++ G
Sbjct: 111 SFGDNS------NSQLGVGDTEPYAEPQLVTVLND-----ENIIKVACGKYHSAALSAKG 159
Query: 334 YKLWSWGRGRSGVLGTGK 351
L+ WG G G LG G
Sbjct: 160 -NLFLWGLGDDGQLGLGN 176
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 11/76 (14%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V V+CGS H A+ G+ Y+WG +G+LGLGD + R P +E F
Sbjct: 248 VSVSCGSFHSAAITENGK--------LYAWGLETDGRLGLGDCKQRSSPTEVEGFRDKK- 298
Query: 190 WAVYEVTCGSFHTALL 205
+ + CGS HTA L
Sbjct: 299 --IGRIACGSKHTAAL 312
>gi|444516740|gb|ELV11273.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 3151
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 1352 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 1408
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 1409 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGHR--- 1457
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 1458 VVQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 1510
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 1511 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 1562
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 1563 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 1608
Score = 92.0 bits (227), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 127/292 (43%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G S P + G VV
Sbjct: 2347 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGSRSPCDRPRVIESLRGIEVVD 2403
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 2404 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 2452
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 2453 VVGIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 2503
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V V+CG + ++ AG V++WG KG + G +
Sbjct: 2504 GLGVVRVECGSQFSVALTKAGAVYTWG--KG---------DYHRLGHGSDDHVRRPRQVQ 2552
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + + + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 2553 GLQGKKAIAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 2603
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 91/338 (26%), Positives = 144/338 (42%), Gaps = 57/338 (16%)
Query: 41 NSLVPCVIEQFLTIGAPDSLEDD-------SKTNHKAPIKICSVKAGGMMSLAIDNAGAL 93
+S + C I + +G + E+D S + + + + V G A+ G +
Sbjct: 1259 SSGIDCKIHGLILLGRIRAEEEDLAAIKVPSFSETLSALNVVQVAGGSKSLFAVTVEGKV 1318
Query: 94 WMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC--GSEHVVALVSAGETY 149
+ G ++ G L S P P V + V KVA G H AL G+ +
Sbjct: 1319 YACGEA----TNGRLGLGLSSGTVPLPRQVTALSSYVVKKVAVHSGGRHATALTVDGKVF 1374
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
SWG ++G+LG R + +P++IE + ++ CGS H+A LT
Sbjct: 1375 --------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAALTS-- 1421
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVS 267
+T+GLGE G+LGHG T + L P+ VK L + +V V CG T ++
Sbjct: 1422 ------SGELYTWGLGEYGRLGHGDTTTQLKPKMVKVLLGH-RVVQVACGSRDAQTLALT 1474
Query: 268 SAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
G V+SWG + G G ++ +N + NG Q Q+ CGA
Sbjct: 1475 DEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG------QGVCQIECGA 1519
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ +T G +W+WG+G LG G + P +V
Sbjct: 1520 QFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 1556
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 1381 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 1422
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH VV+VACGS L E
Sbjct: 1423 GELYTWG---LGEYGRLGHGDTTTQLKPKMVKVLLGHRVVQVACGSRDAQTLALTDEG-- 1477
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 1478 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 1527
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 1528 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 1581
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 1582 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 1627
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 110/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 2399 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 2452
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 2453 VVGIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 2503
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 2504 GLGVVRVECGSQFSVALTK--------AGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 2554
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q +++ G H + G+V++WG E LG ++ R P L++
Sbjct: 2555 QGKKAIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 2606
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 2607 --QGKKVN---RVACGSAHTL 2622
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 2253 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 2309
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 2310 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 2360
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG+ P ++ L + + +V V G H+
Sbjct: 2361 ALSS--------EGEVYSWGEAEDGKLGHGSRSPCDRPRVIESL-RGIEVVDVAAGGAHS 2411
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 2412 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVGIACGS 2460
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 2461 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 2488
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 1512 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 1568
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y +WG N++GQ G G +P +++ +
Sbjct: 1569 VGALHCLAVTDSGQVY--------AWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 1617
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 1618 RVACGSSHSVAWT 1630
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 59/142 (41%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ AGA++ WG D G S P
Sbjct: 2494 KVPMKIDSLTGLGVVRVECGSQFSVALTKAGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 2550
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G + +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 2551 VQGLQGKKAIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 2602
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 2603 VAALQGKK---VNRVACGSAHT 2621
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 2263 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TAD 2311
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 2312 GKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYS 2370
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ I + V VA G AH+ VT
Sbjct: 2371 WGEAEDGKLGHGSRSPCDRPRVIESLRGIEV-------------VDVAAGGAHSACVTAA 2417
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G L++WG+GR G LG + D P +V
Sbjct: 2418 G-DLYTWGKGRYGRLGHSDSEDQLKPKLV 2445
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P+ V G + +V
Sbjct: 1563 KIVHVAVGALHCLAVTDSGQVYAWGDN---DHGQQGNGTTTVNRKPTLVQGLEGQKITRV 1619
Query: 133 ACGSEHVVA 141
ACGS H VA
Sbjct: 1620 ACGSSHSVA 1628
>gi|281361147|ref|NP_608388.2| HERC2 [Drosophila melanogaster]
gi|91206848|sp|Q9VR91.3|HERC2_DROME RecName: Full=Probable E3 ubiquitin-protein ligase HERC2; AltName:
Full=HECT domain and RCC1-like domain-containing protein
2
gi|272506184|gb|AAF50913.3| HERC2 [Drosophila melanogaster]
Length = 4912
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG +LA+ G ++ WG + G + + P V +
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVEALRAKKIRD 3129
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H A+ S GE Y+WG G+LG GD ++L+PK++ +
Sbjct: 3130 VACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNTTQLKPKLVTAL---AGRR 3178
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L +
Sbjct: 3179 VVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL-SGI 3231
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 3232 GVVQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI------ 3277
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3278 -GGLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3330
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G +V
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMSVAD 4192
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 4193 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEALLG---YR 4241
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4242 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4294
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4295 GVVKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4343
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4344 -QGKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4277 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 4333
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 4334 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 4385
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4386 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4424
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 2982 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQ- 3036
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3037 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 3090 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 3136
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 3137 SAAISSQG-ELYTWGLGEYGRLGHGDNTTQLKPKLV 3171
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 3231 IGVVQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIH 3287
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ +
Sbjct: 3288 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF- 3336
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 3337 VNRVACGSSHS 3347
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 116/269 (43%), Gaps = 44/269 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV G S AI G L WG + G + P+ V H VV VA
Sbjct: 670 VQSVYCGCSYSAAITCGGNLLTWGRG---TYARLGHGNSDDRSLPTLVVALSDHMVVDVA 726
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
GS H +AL S G + ++WG + G+LG G+ L+P ++E+ +
Sbjct: 727 LGSGDAHSLALTSEG--------LVFAWGDGDYGKLGNGNCNGSLQPILVESLPR----- 773
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG----LGENGQLGHGTTQSALVPEQVKEL 247
V V GS + L+ E +T+G LG QL + Q VP V L
Sbjct: 774 VQRVFAGSQFSVALSS--------EGQLYTWGKATCLGH--QLVERSVQGCSVPRLVSSL 823
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q+ +V V + H +SS+G+V+ WG +CP AS++ +PIL+S
Sbjct: 824 -QHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP-ASVSSEPL--LRTPILVS--- 876
Query: 308 PHGPKFQDPVQ-VACGAAHTVLVTDDGYK 335
P F P +AC +A +++ T ++
Sbjct: 877 --LPTF--PASGIACTSAQSLVWTQSSHQ 901
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++ ++ G++ +WG
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVYCGCSYSAAITCGGNLLTWGRGT 696
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
A L + D P L+ H V + G AH++ +T +G +++W
Sbjct: 697 ------YARLGHGNSDDRSLPTLVVALSDH---MVVDVALGSGDAHSLALTSEGL-VFAW 746
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-----------KQDELNTGG----LDDEI 384
G G G LG G P +V P + + +L T G L ++
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL 806
Query: 385 KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFG 429
+ ++G +L S+++ +++ +SV A G +FG
Sbjct: 807 VERSVQGCSV--PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 44/232 (18%)
Query: 118 PSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P+ + + +A C H +A+ S Y SWG + +LG GD +R
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAY--------SWGTGEDHRLGHGDTHAR 656
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P I Q +VY CG ++A +T T+G G +LGHG +
Sbjct: 657 AVPTKIAALEQHCVQSVY---CGCSYSAAIT--------CGGNLLTWGRGTYARLGHGNS 705
Query: 236 QSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
+P V L ++ + V++ G H+ ++S G V++WG + G G C N SL
Sbjct: 706 DDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC-NGSL- 763
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
PIL+ P+ Q +V G+ +V ++ +G +L++WG+
Sbjct: 764 --------QPILVESL----PRVQ---RVFAGSQFSVALSSEG-QLYTWGKA 799
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4052 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4103
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4104 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4159 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-------------DIACGSAHSAAITA 4205
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4206 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4234
>gi|301615126|ref|XP_002937025.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein ligase
HERC2-like [Xenopus (Silurana) tropicalis]
Length = 4845
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4052 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGTEVVD 4108
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + +AGE Y+WG G+LG GD E +L+PK++E +
Sbjct: 4109 IAAGGAHSACITAAGE--------LYTWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 4157
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4158 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 4209
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
V + V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4210 -VGVTKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4256
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4257 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4308
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 119/255 (46%), Gaps = 38/255 (14%)
Query: 114 SSFTPSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
++ P V +VK+A +H +AL + E +SWG + G+LG GD
Sbjct: 480 NTLGPQLVQGLASRNIVKIAAHPDGQHYLALSATSE--------LFSWGCGDGGRLGHGD 531
Query: 172 RESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
S PK++ + + + V + CGS ++A +T + +T+G G G+L
Sbjct: 532 TVSLEEPKLVSALSGKQTGKQVIHIACGSTYSAAITA--------DGELYTWGRGNYGRL 583
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
GHG+++ VP V L + + +V V CG T V+ G VWSWG + G
Sbjct: 584 GHGSSEDQTVPMLVTGL-KGLKVVDVSCGSGDAQTLSVTENGQVWSWG-DGDYG-----K 636
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
L R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G +
Sbjct: 637 LGRGGSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIAITKDG-QVYSWGKGDNQR 688
Query: 347 LGTGKTIDFFAPAIV 361
LG G P I+
Sbjct: 689 LGHGTEEHVRYPKIM 703
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 98/208 (47%), Gaps = 21/208 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3051 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3107
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3108 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3156
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3157 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQA 3210
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ ++CG + ++ +G VW+W K
Sbjct: 3211 -VCQIECGAQFSLALTKSGVVWTWXXTK 3237
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 121/274 (44%), Gaps = 55/274 (20%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 3002 AGGSKSLFAVTAEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSNYVVKKVA 3055
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3056 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3104
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3105 IRDIACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3155
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3156 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3206
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
NG Q Q+ CGA ++ +T G +W+W
Sbjct: 3207 NG------QAVCQIECGAQFSLALTKSGV-VWTW 3233
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 44/295 (14%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
EDD K + + ++ K G+ S A +++WG L D GG PS
Sbjct: 2937 EDDDKASTGSFVR---KKTAGLESTATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2989
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ + G+ Y+ G NG+LGLG + P+
Sbjct: 2990 SETLSALNVVQVAGGSKSLFAVTAEGKV--------YACGEATNGRLGLGISSGTVPIPR 3041
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3042 QITAL---SNYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3090
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
P ++ L + + + CG H++ ++S+G++++WG+ + L +
Sbjct: 3091 CDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYTWGLGE------YGRLGHGDNTTQ 3143
Query: 298 ISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ P ++ H +QVACG+ A T+ +TD+G ++SWG G G LG G
Sbjct: 3144 LKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRG 3192
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4199 KVPMKIDSLTGVGVTKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4255
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4256 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4307
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 4308 VAALQGKK---INRVACGSAHTLAWSTSKPAN 4336
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3958 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4014
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4015 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4065
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + +V + G H+
Sbjct: 4066 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGTEVVDIAAGGAHS 4116
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ +++AG++++WG + L ++ D + P L+ G + D +ACG+
Sbjct: 4117 ACITAAGELYTWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 4165
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4166 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4193
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G V KV CGS+
Sbjct: 4165 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGVGVTKVECGSQF 4221
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 4222 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 4270
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 4271 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 4321
Query: 259 GLFHT 263
G HT
Sbjct: 4322 GSAHT 4326
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 80/205 (39%), Gaps = 28/205 (13%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
S +G +L++ G +W WG+ D G TP + +VKV CG
Sbjct: 609 SCGSGDAQTLSVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCG 665
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S+ +A+ G+ Y SWG +N +LG G E PKI+ V +V
Sbjct: 666 SQFSIAITKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKIMNGLQGKK---VVDV 714
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYVYL 253
GS H LT E W G N Q H T + VP + L ++
Sbjct: 715 AVGSTHCLALTESG------EVYSW----GSNDQCQHFDTLRIAKPVPSVLPGLDSK-HI 763
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGME 278
V + CG + SS + WS G+
Sbjct: 764 VGISCGPAQSFAWSSCSE-WSIGLR 787
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 91/218 (41%), Gaps = 48/218 (22%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3968 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 4005
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 4006 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4064
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+SS G+V+SWG + + L P +I + + V +A G
Sbjct: 4065 LALSSEGEVYSWGEAE------DGKLGHGNRSPCDRPRVI-----ESLRGTEVVDIAAGG 4113
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
AH+ +T G +L++WG+GR G LG G + D P +V
Sbjct: 4114 AHSACITAAG-ELYTWGKGRYGRLGHGDSEDQLKPKLV 4150
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 42/95 (44%), Gaps = 11/95 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V+ G S+AI G ++ WG D+ G + P + G VV
Sbjct: 657 LDIVKVRCGSQFSIAITKDGQVYSWGKG---DNQRLGHGTEEHVRYPKIMNGLQGKKVVD 713
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
VA GS H +AL +GE YSWG+N+ Q
Sbjct: 714 VAVGSTHCLALTESGEV--------YSWGSNDQCQ 740
>gi|344298015|ref|XP_003420690.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Loxodonta africana]
Length = 4838
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3049 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3105
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3106 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3154
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3155 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3207
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3208 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3259
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3260 KI---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3305
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P V G VV
Sbjct: 4043 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVVESLRGIEVVD 4099
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4100 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4148
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4149 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4199
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4200 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4247
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4248 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4299
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 118/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V ++K+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 ALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ ++P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEVIPVLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S AI ++
Sbjct: 3078 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAAITSS 3119
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3120 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3174
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3175 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3224
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ AG
Sbjct: 3225 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDAG 3278
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3279 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3324
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G L S P P + + V KVA
Sbjct: 3000 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3055
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3056 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3104
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3105 DIACGSSHSAAITS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3155
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3156 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3206
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3207 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3253
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4095 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4148
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4149 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4199
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4200 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4250
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4251 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4302
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4303 --QGKKVN---RVACGSAHTL 4318
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3949 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALAALRPVQLIGGEQTLFAVT 4005
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4006 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESV-QHVFIKKVAVNSGGKHCL 4056
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P V+ L + + +V V G H+
Sbjct: 4057 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVVESL-RGIEVVDVAAGGAHS 4107
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4108 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4156
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4157 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4184
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3209 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3265
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P +++ +
Sbjct: 3266 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3314
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3315 RVACGSSHSVAWT 3327
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4190 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4246
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4247 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4298
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4299 VAALQGKK---VNRVACGSAHT 4317
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D + P+L++G K + VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEVIPVLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 90/209 (43%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E P + G T +
Sbjct: 3959 YGWGHNHRGQLGGIEGAKVKVPTPCEALAALRPVQLI----GGEQTLFAV-------TAD 4007
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G T+S P ++ + Q+V++ V+V+ G H +SS G+V+S
Sbjct: 4008 GKLYATGYGAGGRLGIGGTESVSTPTLLESV-QHVFIKKVAVNSGGKHCLALSSEGEVYS 4066
Query: 275 WG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG E G LG + R +++ I + V VA G AH+ VT
Sbjct: 4067 WGEAEDGKLGHGNRSPCDRPRVVESLRGIEV-------------VDVAAGGAHSACVTAA 4113
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G L++WG+GR G LG + D P +V
Sbjct: 4114 G-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4141
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 238 ALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
AL P+ V+ L + + ++ H +++ G+V+SWG G G + E
Sbjct: 482 ALAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDG-GRLGHGDTVPLEEPK 540
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
IS G H V +ACG+ ++ +T +G +L++WGRG G LG G + D
Sbjct: 541 VISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGRGNYGRLGHGSSEDEV 593
Query: 357 APAIV 361
P +V
Sbjct: 594 IPVLV 598
>gi|444919546|ref|ZP_21239558.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708349|gb|ELW49424.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 494
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/310 (30%), Positives = 135/310 (43%), Gaps = 52/310 (16%)
Query: 60 LEDDSKTNHKAPI--------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L D + T P+ ++ +V AG SLA+ + G +W WG+ S G +
Sbjct: 28 LGDGTTTYSPVPVPVQVQGLSEVVAVDAGSSHSLAVRSDGTVWAWGSNA---SGQLGDET 84
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+S TP V G V+ VA GS HV+AL Y G ++WG+N++GQ G G
Sbjct: 85 TISRSTPVQVLGLSG--VLFVAAGSSHVLAL-----RYDGT---VWAWGSNSSGQRGDGT 134
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+R P + + V V G H+ L R + W +G +GQLG
Sbjct: 135 TNNRALPVQAQGLS-----GVMAVAAGDNHS--LAVRS------DGSAWAWGSNASGQLG 181
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GTT + P QV+ L +V+V G H+ V S G VW+WG + L
Sbjct: 182 EGTTSNRPEPVQVQGLSG---VVAVAAGSAHSLAVRSDGTVWAWGANA------SGQLGD 232
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
D + P+ + G V VA G H++ V +DG +W WGR S LG G
Sbjct: 233 GTTTDRLVPVQVQG-------LSGVVAVAAGHHHSLAVRNDG-TVWGWGRNDSNQLGKG- 283
Query: 352 TIDFFAPAIV 361
++ PA V
Sbjct: 284 SMRLLVPAQV 293
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 130/305 (42%), Gaps = 52/305 (17%)
Query: 56 APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
A L D + T+ P+++ +V AG SLA+ N G +W WG + S + G
Sbjct: 226 ASGQLGDGTTTDRLVPVQVQGLSGVVAVAAGHHHSLAVRNDGTVWGWGR----NDSNQLG 281
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ P+ V VV VA G H +A+ G D ++ G+NNNGQLG
Sbjct: 282 KGSMRLLVPAQVQGLS--AVVAVAAGDTHSLAV--------GSDGTVWAVGSNNNGQLGD 331
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G RL P + + V V +H+ L R + W +G GQ
Sbjct: 332 GTTTYRLVPVPVLS-------GVVSVAANDYHS--LAVRS------DGTVWAWGYNSTGQ 376
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GTT + LVP QV L + +VSV G +H+ V S G W WG G + S
Sbjct: 377 LGDGTTTTRLVPVQVSGLSE---VVSVVAGGYHSLAVRSDGSAWDWG-SNAYGQLGDGST 432
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
T P+ + + VA G++H++ + DG +W+WG G LG
Sbjct: 433 TYLPV-----PVRVQ-------QLSGVGAVASGSSHSLALRSDG-TVWTWGYNSFGQLGN 479
Query: 350 GKTID 354
G ++
Sbjct: 480 GPPLN 484
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 125/290 (43%), Gaps = 51/290 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT-VVK 131
+ AG SLA+ + G +W WG + L D +T +++P PV G + VV
Sbjct: 1 MAAGSSHSLALRSDGTVWAWGANSSGQLGDGTT--------TYSPVPVPVQVQGLSEVVA 52
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V GS H +A+ S D ++WG+N +GQLG SR P + +
Sbjct: 53 VDAGSSHSLAVRS--------DGTVWAWGSNASGQLGDETTISRSTPVQVLGLS-----G 99
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V GS H L + + W +G +GQ G GTT + +P Q + L
Sbjct: 100 VLFVAAGSSHVLALRY--------DGTVWAWGSNSSGQRGDGTTNNRALPVQAQGLSG-- 149
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+++V G H+ V S G W+WG L + R E P+ + G
Sbjct: 150 -VMAVAAGDNHSLAVRSDGSAWAWGSNASGQLGEGTTSNRPE------PVQVQG------ 196
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V VA G+AH++ V DG +W+WG SG LG G T D P V
Sbjct: 197 -LSGVVAVAAGSAHSLAVRSDG-TVWAWGANASGQLGDGTTTDRLVPVQV 244
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/306 (29%), Positives = 134/306 (43%), Gaps = 53/306 (17%)
Query: 63 DSKTNHKA-PIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
D TN++A P++ + +V AG SLA+ + G+ W WG+ ++S + G S+
Sbjct: 132 DGTTNNRALPVQAQGLSGVMAVAAGDNHSLAVRSDGSAWAWGS----NASGQLGEGTTSN 187
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P PV VV VA GS H +A+ S D ++WGAN +GQLG G R
Sbjct: 188 R-PEPVQVQGLSGVVAVAAGSAHSLAVRS--------DGTVWAWGANASGQLGDGTTTDR 238
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P ++ + V V G H+ + + + W +G ++ QLG G+
Sbjct: 239 LVPVQVQGLS-----GVVAVAAGHHHSLAVRN--------DGTVWGWGRNDSNQLGKGSM 285
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+ LVP QV+ L +V+V G H+ V S G VW+ +G N L
Sbjct: 286 R-LLVPAQVQGLSA---VVAVAAGDTHSLAVGSDGTVWA------VGSNNNGQLGDGTTT 335
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ P V VA H++ V DG +W+WG +G LG G T
Sbjct: 336 YRLVPV---------PVLSGVVSVAANDYHSLAVRSDG-TVWAWGYNSTGQLGDGTTTTR 385
Query: 356 FAPAIV 361
P V
Sbjct: 386 LVPVQV 391
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 127/313 (40%), Gaps = 50/313 (15%)
Query: 56 APDSLEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
A L D++ + P+++ V AG LA+ G +W WG+ S G
Sbjct: 76 ASGQLGDETTISRSTPVQVLGLSGVLFVAAGSSHVLALRYDGTVWAWGSN---SSGQRGD 132
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ + P G V+ VA G H +A+ S G ++WG+N +GQLG
Sbjct: 133 GTTNNRALPVQAQGLSG--VMAVAAGDNHSLAVRSDGS--------AWAWGSNASGQLGE 182
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G +R P ++ + V V GS H+ L R + W +G +GQ
Sbjct: 183 GTTSNRPEPVQVQGLS-----GVVAVAAGSAHS--LAVRS------DGTVWAWGANASGQ 229
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GTT LVP QV+ L +V+V G H+ V + G VW WG
Sbjct: 230 LGDGTTTDRLVPVQVQGLSG---VVAVAAGHHHSLAVRNDGTVWGWGRND---------- 276
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
N+ G +L+ V VA G H++ V DG +W+ G +G LG
Sbjct: 277 -SNQLGKGSMRLLVP---AQVQGLSAVVAVAAGDTHSLAVGSDG-TVWAVGSNNNGQLGD 331
Query: 350 GKTIDFFAPAIVL 362
G T P VL
Sbjct: 332 GTTTYRLVPVPVL 344
>gi|357613847|gb|EHJ68745.1| hypothetical protein KGM_02265 [Danaus plexippus]
Length = 1039
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 117/271 (43%), Gaps = 42/271 (15%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDF 124
A + V G ++ + N G L+ WG C L + S + TP +
Sbjct: 139 ATKNVIQVACGSYHTVVLTNNGDLYAWGANSYGQCGLGNRSNK-------ETTPQALSSI 191
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G + +ACGS H AL +G + WG N++GQLGL DRESR P ++T
Sbjct: 192 LGIPIALIACGSNHTFALSQSG--------AVFGWGKNSHGQLGLQDRESRCYPTHLKTL 243
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V ++CG TA LT L+ +T G GE GQ GHG T+ LVP +V
Sbjct: 244 RN---VKVCHISCGEDFTAFLT--------LDGGVFTCGAGEYGQTGHGNTKDELVPRKV 292
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGD---VWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
EL + V CG H ++ G+ +G LG CP+ + +P
Sbjct: 293 MELMGST-VTQVACGRRH--MLCRVGERILACGYGARGQLG-CPHMAFALVPTPVTFTP- 347
Query: 302 LISGNGPHGPK-FQDPVQVACGAAHTVLVTD 331
+ P P+ F PV+V G H+ L+ +
Sbjct: 348 --NDESPFSPEIFSGPVKVFAGGDHSFLILN 376
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 127/295 (43%), Gaps = 44/295 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW--DFHGHTVVK 131
I + AG +L + N G L+ G+ + + G S+ SPV F G T+
Sbjct: 37 IQQISAGEFHTLYLSNNGHLYTCGS----NEVGQLGRQTNSADGTSPVLVDTFKGCTLST 92
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG--LGDRESRLRPKIIETFNQDSP 189
+ACG +H +AL G+ +SWG+++ GQLG LG ++ +PKII+T +
Sbjct: 93 IACGLQHSMALDEWGQP--------FSWGSDSMGQLGSNLGSH-AQDKPKIIKTLATKN- 142
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS+HT +LT+ D+ + +G GQ G G + Q
Sbjct: 143 --VIQVACGSYHTVVLTNN---GDL-----YAWGANSYGQCGLGNRSNKETTPQALSSIL 192
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNG 307
+ + + CG HT +S +G V+ WG LGL S + + +
Sbjct: 193 GIPIALIACGSNHTFALSQSGAVFGWGKNSHGQLGLQDRESRCYPTHLKTLRNVKV---- 248
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
++CG T +T DG +++ G G G G G T D P V+
Sbjct: 249 ---------CHISCGEDFTAFLTLDG-GVFTCGAGEYGQTGHGNTKDELVPRKVM 293
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/244 (23%), Positives = 83/244 (34%), Gaps = 38/244 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV---SSFTPSPVWDFHGHT 128
I I + G + A+ +GA++ WG ++ G L S P+ +
Sbjct: 194 IPIALIACGSNHTFALSQSGAVFGWG------KNSHGQLGLQDRESRCYPTHLKTLRNVK 247
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQD 187
V ++CG + L G ++ GA GQ G G+ + L P K++E
Sbjct: 248 VCHISCGEDFTAFLTLDGGV--------FTCGAGEYGQTGHGNTKDELVPRKVMELMGS- 298
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CG H + G G GQLG ALVP V
Sbjct: 299 ---TVTQVACGRRHMLCRVGER---------ILACGYGARGQLGCPHMAFALVPTPVTFT 346
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
P D F + S V++ G L L S + DA IL N
Sbjct: 347 PN-------DESPFSPEIFSGPVKVFAGGDHSFLILNSEKSPADSRVADASKQILSLSNA 399
Query: 308 PHGP 311
P
Sbjct: 400 KLVP 403
>gi|304318007|ref|YP_003853152.1| S-layer domain-containing protein [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302779509|gb|ADL70068.1| S-layer domain protein [Thermoanaerobacterium thermosaccharolyticum
DSM 571]
Length = 479
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 126/292 (43%), Gaps = 45/292 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ AG ++A+ N G +W WG D G + + P V VV +A
Sbjct: 228 VKAIAAGAYHTVALKNDGTVWAWG---WNDCGQLGDGTTTNRTIPVQVKGIS--DVVAIA 282
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG--LGDRESRLRPKIIETFNQDSPWA 191
G H VAL + G ++WG N + QLG E P ++ +
Sbjct: 283 AGMYHTVALKNDG--------TVWAWGDNEHDQLGNETTKEEYHSTPVQVKGISD----- 329
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + G+ +T +L + + W +G+ E G+LG GTT ++ P QV +
Sbjct: 330 VKAIAAGASYTVVLKN--------DGTVWAWGVNEYGKLGDGTTNNSFTPVQVNGISN-- 379
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++ G +HT V+ + G VW+WG G N + D+ +P+ + G
Sbjct: 380 -VKAIAAGAYHTVVLKNDGTVWTWGYNH-YGELGNGTTV-----DSSTPVQVKG------ 426
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
D +A GA HTV + +DG +W+WG G LG G +D P V W
Sbjct: 427 -ISDVKAIAAGACHTVALKNDG-TVWAWGCNYYGELGNGTAVDSSTPVQVKW 476
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 108/236 (45%), Gaps = 40/236 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
TV +A G+ H VAL + G ++WG N+ GQLG G +R P ++ +
Sbjct: 227 TVKAIAAGAYHTVALKNDG--------TVWAWGWNDCGQLGDGTTTNRTIPVQVKGISD- 277
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL--VPEQVK 245
V + G +HT L + + W +G E+ QLG+ TT+ P QVK
Sbjct: 278 ----VVAIAAGMYHTVALKN--------DGTVWAWGDNEHDQLGNETTKEEYHSTPVQVK 325
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ + ++ G +T V+ + G VW+WG+ + L ++ +P+ ++G
Sbjct: 326 GISD---VKAIAAGASYTVVLKNDGTVWAWGVNE------YGKLGDGTTNNSFTPVQVNG 376
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +A GA HTV++ +DG +W+WG G LG G T+D P V
Sbjct: 377 -------ISNVKAIAAGAYHTVVLKNDG-TVWTWGYNHYGELGNGTTVDSSTPVQV 424
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 101/224 (45%), Gaps = 35/224 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + TN P+++ ++ AG ++A+ N G +W WG+ + G +
Sbjct: 258 LGDGTTTNRTIPVQVKGISDVVAIAAGMYHTVALKNDGTVWAWGDN---EHDQLGNETTK 314
Query: 114 SSFTPSPVWDFHGHTVVK-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ +PV G + VK +A G+ + V L + G ++WG N G+LG G
Sbjct: 315 EEYHSTPV-QVKGISDVKAIAAGASYTVVLKNDG--------TVWAWGVNEYGKLGDGTT 365
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ P + + V + G++HT +L + + WT+G G+LG+
Sbjct: 366 NNSFTPVQVNGISN-----VKAIAAGAYHTVVLKN--------DGTVWTWGYNHYGELGN 412
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
GTT + P QVK + + ++ G HT + + G VW+WG
Sbjct: 413 GTTVDSSTPVQVKGISD---VKAIAAGACHTVALKNDGTVWAWG 453
>gi|156372872|ref|XP_001629259.1| predicted protein [Nematostella vectensis]
gi|156216255|gb|EDO37196.1| predicted protein [Nematostella vectensis]
Length = 4220
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ SV +GG ++A+ G L+ WG + G + ++ P + F V
Sbjct: 2509 VRKVSVHSGGRHAMALTIEGKLFSWGEG---EDGKLGHGNRMNCDHPKLIDTFKSSCVRD 2565
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CGS H A++S+GE Y+WG G+LG GD + L+PK +++F
Sbjct: 2566 MSCGSSHSAAILSSGE--------LYTWGLGEYGRLGHGDNYTHLKPKKVQSFTSHR--- 2614
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ CGS L + W++G G+ G+LG G ++ VP V++L Q
Sbjct: 2615 VIDIACGSRDAQTLALTD------DGTVWSWGDGDFGKLGRGGSEGCSVPNPVEKL-QGQ 2667
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG + +S++G VW+WG KG L P ++ +G G
Sbjct: 2668 GVCKVACGAQFSLALSTSGLVWTWG--KG----DYYRLGHGNDTHVRKPQIV--DGLRGK 2719
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G T P +V
Sbjct: 2720 KI---VDVAVGALHCLAVTDSG-QVFAWGDNDHGQQGNNTTTVNRRPQLV 2765
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ +V +GG ++A+ G ++ WG D G + S P + G V+
Sbjct: 3441 VRKVAVHSGGKHAMALSADGDVYSWGEG---DDGKLGHGNRNSCDRPRVIEALRGKGVID 3497
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CG H + E Y+WG G+LG GD E +L PK++E +
Sbjct: 3498 ISCGGSHSACITQNHE--------LYTWGKGRYGRLGHGDSEDQLLPKVVEALRGNR--- 3546
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + +P +V+ L
Sbjct: 3547 VIDVACGSGDAQTLCLTD--------DDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIG 3598
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ + V+CG + ++ +G V++WG KG LG + + R + A+
Sbjct: 3599 -LGVSKVECGSQFSVALTRSGAVYTWG--KGDYYRLGHGVDDHVRRPKRVAAL------- 3648
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V TD G ++++WG G LG G T P +V
Sbjct: 3649 ---QGKKV---ITIATGSLHCVASTDTG-EVYTWGDNDEGQLGDGTTNAIARPRLV 3697
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 115/269 (42%), Gaps = 35/269 (13%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
G LA+ G ++ WG+ D G P+ V G V++++CGS H
Sbjct: 26 GKHFLALTREGEVYSWGSG---DGGKLGHGDTSPREEPTLVTGLAGKQVIRISCGSTHSA 82
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
A+ S GE Y+WG N G+LG G E +L P ++ + +V CGS
Sbjct: 83 AVTSEGE--------LYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGHH---IIDVACGSG 131
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
L + W++G G+ G+LG G + P+ ++ L Q + + V CG
Sbjct: 132 DAHTLAAAD------DGTVWSWGDGDYGKLGRGGSDGCKNPKSIERL-QGLGVCKVYCGA 184
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQV 319
+ ++ G VW+WG +G L P L+ +G H V V
Sbjct: 185 QFSLALTRDGSVWTWGKGEGF------RLGHGTEDHVRHPKLVEALDGKH------VVDV 232
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ G+ H + +TD G +++ WGR G LG
Sbjct: 233 SVGSIHCLALTDAG-EVYCWGRNDQGQLG 260
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 102/233 (43%), Gaps = 46/233 (19%)
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
+H +AL GE Y SWG+ + G+LG GD R P ++ V ++
Sbjct: 27 KHFLALTREGEVY--------SWGSGDGGKLGHGDTSPREEPTLVTGLAGKQ---VIRIS 75
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
CGS H+A +T E +T+G G G+LGHG+++ LVP V L + +++ V
Sbjct: 76 CGSTHSAAVTS--------EGELYTWGRGNYGRLGHGSSEDQLVPVLVSGLRGH-HIIDV 126
Query: 257 DCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
CG HT + G VWSWG GD +G PK
Sbjct: 127 ACGSGDAHTLAAADDGTVWSWG-----------------DGDYGKLGRGGSDGCKNPKSI 169
Query: 315 DPVQ------VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +Q V CGA ++ +T DG +W+WG+G LG G P +V
Sbjct: 170 ERLQGLGVCKVYCGAQFSLALTRDG-SVWTWGKGEGFRLGHGTEDHVRHPKLV 221
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 125/265 (47%), Gaps = 44/265 (16%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGH-TVVKVACGSEHVVALVSAGETYK 150
+++WG L D GG L S PV +F G V ++A GS+ + A+ ++
Sbjct: 2423 VFVWG---LNDKDQLGG--LKGSKIKVPVLSEFIGALKVQQIAGGSKTLFAV-----SHD 2472
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTC--GSFHTALLTH 207
G+ C G + NG+LGLG + + P+ IE S + V +V+ G H LT
Sbjct: 2473 GKVFAC---GESTNGRLGLGPLSANVTVPRQIENL---SSFMVRKVSVHSGGRHAMALT- 2525
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+E +++G GE+G+LGHG + P+ + + + + CG H++ +
Sbjct: 2526 -------IEGKLFSWGEGEDGKLGHGNRMNCDHPKLIDTF-KSSCVRDMSCGSSHSAAIL 2577
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
S+G++++WG+ + L + + P + H + +ACG+ A
Sbjct: 2578 SSGELYTWGLGE------YGRLGHGDNYTHLKPKKVQSFTSH-----RVIDIACGSRDAQ 2626
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTG 350
T+ +TDDG +WSWG G G LG G
Sbjct: 2627 TLALTDDG-TVWSWGDGDFGKLGRG 2650
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 74/188 (39%), Gaps = 39/188 (20%)
Query: 22 ICYTSLNCCMD------GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKI 74
+C T +C G+LG GS+ +P +E + +G +
Sbjct: 3560 LCLTDDDCVWSWGDGDYGKLGRGGSDGCKIPMKVESLIGLG------------------V 3601
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
V+ G S+A+ +GA++ WG D G P V G V+ +A
Sbjct: 3602 SKVECGSQFSVALTRSGAVYTWGKG---DYYRLGHGVDDHVRRPKRVAALQGKKVITIAT 3658
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
GS H VA GE Y +WG N+ GQLG G + RP+++ +
Sbjct: 3659 GSLHCVASTDTGEVY--------TWGDNDEGQLGDGTTNAIARPRLVTALQGKK---ISR 3707
Query: 195 VTCGSFHT 202
V CGS HT
Sbjct: 3708 VACGSAHT 3715
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 78/198 (39%), Gaps = 24/198 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA + G +W WG+ D G P + G V KV CG++
Sbjct: 130 SGDAHTLAAADDGTVWSWGDG---DYGKLGRGGSDGCKNPKSIERLQGLGVCKVYCGAQF 186
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G ++WG +LG G + PK++E + V +V+ G
Sbjct: 187 SLALTRDGSV--------WTWGKGEGFRLGHGTEDHVRHPKLVEALDGKH---VVDVSVG 235
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H LT D E CW G + GQLG Q P V L +V + C
Sbjct: 236 SIHCLALT------DAGEVYCW--GRNDQGQLGDIDCQIRPEPTLVSGLASK-GIVGIAC 286
Query: 259 GLFHTSVVSSAGDVWSWG 276
G + S AG WS G
Sbjct: 287 GPAQSFAWSCAGQ-WSVG 303
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 73/185 (39%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P V G V KV CGS+
Sbjct: 3554 SGDAQTLCLTDDDCVWSWGDG---DYGKLGRGGSDGCKIPMKVESLIGLGVSKVECGSQF 3610
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RPK + V + G
Sbjct: 3611 SVALTRSG--------AVYTWGKGDYYRLGHGVDDHVRRPKRVAALQGKK---VITIATG 3659
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T D E +T+G + GQLG GTT + P V L Q + V C
Sbjct: 3660 SLHCVAST------DTGE--VYTWGDNDEGQLGDGTTNAIARPRLVTAL-QGKKISRVAC 3710
Query: 259 GLFHT 263
G HT
Sbjct: 3711 GSAHT 3715
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 21/132 (15%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D ++ + +C V G SLA+ G++W WG GF L
Sbjct: 158 GGSDGCKNPKSIERLQGLGVCKVYCGAQFSLALTRDGSVWTWGKGE--------GFRLGH 209
Query: 115 SFT-----PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
P V G VV V+ GS H +AL AGE Y WG N+ GQLG
Sbjct: 210 GTEDHVRHPKLVEALDGKHVVDVSVGSIHCLALTDAGEV--------YCWGRNDQGQLGD 261
Query: 170 GDRESRLRPKII 181
D + R P ++
Sbjct: 262 IDCQIRPEPTLV 273
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 89/208 (42%), Gaps = 28/208 (13%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P+ IE P + G T E
Sbjct: 3357 YGWGHNHRGQLGSLEGAKVKLPQTIEALASIRPVQI----VGGEQTLFAV-------TAE 3405
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSW 275
+ G G G+LG G T + + ++ L V V+V G H +S+ GDV+SW
Sbjct: 3406 GKVYATGYGHGGRLGLGGTDTVTSIKMLESLQHVVVRKVAVHSGGKHAMALSADGDVYSW 3465
Query: 276 GM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G + LG S R +A+ G G + ++CG +H+ +T +
Sbjct: 3466 GEGDDGKLGHGNRNSCDRPRVIEALR-----GKGV--------IDISCGGSHSACITQN- 3511
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++L++WG+GR G LG G + D P +V
Sbjct: 3512 HELYTWGKGRYGRLGHGDSEDQLLPKVV 3539
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ ++G ++ WG+ D +G + + P V G + +V
Sbjct: 2720 KIVDVAVGALHCLAVTDSGQVFAWGD---NDHGQQGNNTTTVNRRPQLVNGLEGQKITRV 2776
Query: 133 ACGSEHVVA 141
ACGS H +A
Sbjct: 2777 ACGSSHSIA 2785
>gi|403364753|gb|EJY82151.1| RCC1 domain containing protein [Oxytricha trifallax]
Length = 1344
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 62/229 (27%), Positives = 112/229 (48%), Gaps = 33/229 (14%)
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
H + +VACGS H++A+ ED +SWG+ G LG G R+ P+ +
Sbjct: 287 HTKPITQVACGSAHILAIT--------EDSELFSWGSGQYGALGFGTRDDIFEPRHLIIE 338
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+D + + + CG +H+ LT +K+ T+G G+ G+LGHG LVP+++
Sbjct: 339 KKDYTYFIEGIACGKYHSMCLTRKKK--------ILTWGQGQGGRLGHGDEDDVLVPKEI 390
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPIL 302
+L + + + G H++ +S ++++WG LG + S + P L
Sbjct: 391 YDLSKKKPIF-ISAGESHSAAISEKLNLYTWGTGTYGRLGHGMDTSEKK--------PKL 441
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
I + + + V+CGA HT+ +T G ++++G+G+ G LG +
Sbjct: 442 IEDLDQY-----EIIHVSCGAFHTLAITGQG-TVYAFGQGKYGKLGINR 484
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 60/270 (22%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P ++D + ++ G H A+ E L Y+WG G+LG G S
Sbjct: 385 LVPKEIYDLSKKKPIFISAGESHSAAI--------SEKLNLYTWGTGTYGRLGHGMDTSE 436
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+PK+IE +Q + + V+CG+FHT +T + + FG G+ G+LG
Sbjct: 437 KKPKLIEDLDQ---YEIIHVSCGAFHTLAITG--------QGTVYAFGQGKYGKLGINRK 485
Query: 236 QSALV---PEQVKEL-----PQYVYL------VSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
Q V PE++ PQ + + + G H+ ++ +G ++SWG G
Sbjct: 486 QREGVFSRPEKISFYKVGVEPQEMLVQDKNEAILAAAGYNHSLCLAKSGKIYSWGYN-GK 544
Query: 282 GLCPNASLTRNEAGDAISPILI-------------------SGNGPHGPKFQ-DPVQVAC 321
GL L R + + PI I G+ F + +QVAC
Sbjct: 545 GL-----LGRQKGFEEHLPIEIGQIPGELIGKIPNIDELIQRGDLKQEETFSYEVIQVAC 599
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
G +TV +T+ G +++ +G G L K
Sbjct: 600 GVLNTVSLTNGG-EVYVFGSNAYGQLAKDK 628
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 82/350 (23%), Positives = 149/350 (42%), Gaps = 35/350 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S A+ G L++ GN L + G +L F S + + VA
Sbjct: 723 IQMIACGDNYSAAVSAFGELFVTGN--LENGKLGLGQALKKGFLLSFTLIQNLAPIKSVA 780
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H++A+ + +D +CYSWG N GQLG+G +E PK I ++
Sbjct: 781 CGPNHMLAIADYNPDHPIKDGMCYSWGRNWKGQLGIGSKEDSNVPKKI----HNAKERFK 836
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL-GHGTTQSALVPEQVKELPQYVY 252
+V CG + LT+ + W G N T+ +P+ ++ L Q
Sbjct: 837 KVACGQDFSIGLTYGN------QVYLW----GNNKYFCDSKITKDVDIPQLLQALEQ-AQ 885
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ + C SV++ G++ WG + +N+ D S ++ K
Sbjct: 886 IKDIACSYKFCSVLNDKGEILIWGS------YLTDRIKQNQKKDKKSQNHLAITKFPMRK 939
Query: 313 FQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI--VLWPPLTEE 369
F ++ ++ G H+ V+ L++WG G LG + ++ I +L + +
Sbjct: 940 FDFLMETISAGQNHSAAVSVK-RSLYTWGHAEGGRLGLNEK-EYKNAKIEPILVQSIHDI 997
Query: 370 FKQDELN----TGGLDDEIKTKDLEGAE--ERDEKLSSAMEEMKLLQSKL 413
+++ N G D+EIK E ++ ++D+K+ S ++E + ++KL
Sbjct: 998 MQKNRQNLKEGRGAGDEEIKNLQYESSKPAQKDDKMMSNIQEERKAENKL 1047
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/187 (24%), Positives = 77/187 (41%), Gaps = 24/187 (12%)
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
RP I+ P + +V CGS H +T +S +++G G+ G LG GT
Sbjct: 278 RPTAIKFPKHTKP--ITQVACGSAHILAITE--------DSELFSWGSGQYGALGFGTRD 327
Query: 237 SALVPEQ-VKELPQYVYLVS-VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
P + E Y Y + + CG +H+ ++ + +WG +G L +
Sbjct: 328 DIFEPRHLIIEKKDYTYFIEGIACGKYHSMCLTRKKKILTWGQGQG------GRLGHGDE 381
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
D + P I P F ++ G +H+ +++ L++WG G G LG G
Sbjct: 382 DDVLVPKEIYDLSKKKPIF-----ISAGESHSAAISEK-LNLYTWGTGTYGRLGHGMDTS 435
Query: 355 FFAPAIV 361
P ++
Sbjct: 436 EKKPKLI 442
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 112/269 (41%), Gaps = 66/269 (24%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-------- 178
+ V++VACG + V+L + GE Y +G+N GQL ++ R
Sbjct: 592 YEVIQVACGVLNTVSLTNGGE--------VYVFGSNAYGQLAKDKDQTTFRKYKKQDQNN 643
Query: 179 -----KIIETFNQ--------DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
+ +++ Q ++ + + CG H ++ R N++ FG G
Sbjct: 644 NNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAIS---RMNEL-------FGWG 693
Query: 226 EN--GQLGHG-TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKG- 280
N GQLG G + P ++++ + + + CG +++ VS+ G+++ G +E G
Sbjct: 694 RNDEGQLGLGFVSDFTAEPTLIRQIA-HKNIQMIACGDNYSAAVSAFGELFVTGNLENGK 752
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD--------D 332
LGL +L + G +S LI P VACG H + + D D
Sbjct: 753 LGL--GQALKK---GFLLSFTLIQNLAPIKS-------VACGPNHMLAIADYNPDHPIKD 800
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +SWGR G LG G D P +
Sbjct: 801 GM-CYSWGRNWKGQLGIGSKEDSNVPKKI 828
Score = 42.4 bits (98), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 57/292 (19%), Positives = 103/292 (35%), Gaps = 88/292 (30%)
Query: 63 DSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPL------PDSSTEGGF------ 110
D K ++ V G + ++++ N G ++++G+ D +T +
Sbjct: 583 DLKQEETFSYEVIQVACGVLNTVSLTNGGEVYVFGSNAYGQLAKDKDQTTFRKYKKQDQN 642
Query: 111 ------SLVSSFTPSPVWDFHGHTVVKV---ACGSEHVVALVSAGETYKGEDLVCYSWGA 161
+ S + F G T V++ ACG EH+ A+ E + WG
Sbjct: 643 NNNDNSQALDSSEQMSLIKFPGETTVRINYIACGGEHIFAISRMNE--------LFGWGR 694
Query: 162 NNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR---------- 210
N+ GQLGLG + P +I Q + + + CG ++A ++
Sbjct: 695 NDEGQLGLGFVSDFTAEPTLIR---QIAHKNIQMIACGDNYSAAVSAFGELFVTGNLENG 751
Query: 211 -------------------------------PNDML------------ESMCWTFGLGEN 227
PN ML + MC+++G
Sbjct: 752 KLGLGQALKKGFLLSFTLIQNLAPIKSVACGPNHMLAIADYNPDHPIKDGMCYSWGRNWK 811
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
GQLG G+ + + VP+++ + V CG + ++ V+ WG K
Sbjct: 812 GQLGIGSKEDSNVPKKIHNAKE--RFKKVACGQDFSIGLTYGNQVYLWGNNK 861
>gi|443688897|gb|ELT91442.1| hypothetical protein CAPTEDRAFT_169244 [Capitella teleta]
Length = 1060
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 132/296 (44%), Gaps = 40/296 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ +G S + +AG ++ WG+ + G S+ P V H VV+V
Sbjct: 95 NVLQASSGTKHSTVLTDAGQVFTWGSNE-DNQLGRGQVDSASTSIPRMVRGLADHKVVQV 153
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS H V L + G+ Y +WG+NN+GQLGL ++ + P+ + S +
Sbjct: 154 ACGSAHTVGLTATGQIY--------TWGSNNHGQLGLANKTPQNEPQWVSCI---SGLPI 202
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V G+ H +LT + + +G GQLG G Q P VK L +
Sbjct: 203 VRVAAGADHNLVLT--------ISGALFAWGCNSFGQLGVGDDQDRGAPTLVKTL-RNQG 253
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ ++ CG H+ ++ G V+++G G+ L N + + + P +
Sbjct: 254 ICALACGDDHSLALTRDGGVFTFG--AGM----YGQLGHNTSNNELLPRKV--------- 298
Query: 313 FQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
F+ Q+ACG H++ +++ +G G +G LGTG T++ +PA+V P
Sbjct: 299 FELMGSSVTQIACGRKHSIAYVPSSGRVYVFGLGGNGQLGTGSTVNRMSPAMVKGP 354
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 112/258 (43%), Gaps = 40/258 (15%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
GG + P + F VV +ACG +H + + G S G N+ GQ
Sbjct: 25 GGLEEETVTLPREIRSFCNVEVVHIACGLQHTLFVKKDGRV--------LSCGNNDYGQ- 75
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
LG + RP +I++ + + V + + G+ H+ +LT +T+G E+
Sbjct: 76 -LGHEKPCKRPALIDSLGERN---VLQASSGTKHSTVLTD--------AGQVFTWGSNED 123
Query: 228 GQLGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGL 283
QLG G SA +P V+ L + +V V CG HT +++ G +++WG LGL
Sbjct: 124 NQLGRGQVDSASTSIPRMVRGLADH-KVVQVACGSAHTVGLTATGQIYTWGSNNHGQLGL 182
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
+ IS + I V+VA GA H +++T G L++WG
Sbjct: 183 ANKTPQNEPQWVSCISGLPI-------------VRVAAGADHNLVLTISG-ALFAWGCNS 228
Query: 344 SGVLGTGKTIDFFAPAIV 361
G LG G D AP +V
Sbjct: 229 FGQLGVGDDQDRGAPTLV 246
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 89/194 (45%), Gaps = 30/194 (15%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG+ +GQLGLG + E+ P+ I +F V + CG HT + R
Sbjct: 14 WGSLTHGQLGLGGLEEETVTLPREIRSFCN---VEVVHIACGLQHTLFVKKDGR------ 64
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ G + GQLGH + P + L + L G H++V++ AG V++WG
Sbjct: 65 --VLSCGNNDYGQLGH--EKPCKRPALIDSLGERNVL-QASSGTKHSTVLTDAGQVFTWG 119
Query: 277 MEKGLGLCPNASLTRNEAGDAIS--PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
+ + L R + A + P ++ G H VQVACG+AHTV +T G
Sbjct: 120 SNE------DNQLGRGQVDSASTSIPRMVRGLADH-----KVVQVACGSAHTVGLTATG- 167
Query: 335 KLWSWGRGRSGVLG 348
++++WG G LG
Sbjct: 168 QIYTWGSNNHGQLG 181
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 76/181 (41%), Gaps = 35/181 (19%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMW-----GNCPLPDSSTEGGFSLVSSFTPSPVWDFHG 126
+ I V AG +L + +GAL+ W G + D G P+ V
Sbjct: 200 LPIVRVAAGADHNLVLTISGALFAWGCNSFGQLGVGDDQDRGA--------PTLVKTLRN 251
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFN 185
+ +ACG +H +AL G +++GA GQLG + L P K+ E
Sbjct: 252 QGICALACGDDHSLALTRDGGV--------FTFGAGMYGQLGHNTSNNELLPRKVFELMG 303
Query: 186 QDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+V ++ CG H+ A + R + FGLG NGQLG G+T + + P V
Sbjct: 304 S----SVTQIACGRKHSIAYVPSSGR--------VYVFGLGGNGQLGTGSTVNRMSPAMV 351
Query: 245 K 245
K
Sbjct: 352 K 352
>gi|325186780|emb|CCA21326.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 954
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 140/329 (42%), Gaps = 99/329 (30%)
Query: 82 MMSLAIDNAGA-LWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVKVACGSEHV 139
+ S+ +D A +++WG P G+S +S TP V G ++ ++ACG H+
Sbjct: 201 IASMELDQKCARVFLWGRPP--------GWSHTNSLLTPQKVDVLPGQSIAEIACGGNHI 252
Query: 140 VALVSAGETYKGED----------------------------------LVC--------- 156
+ L SAG+ Y ED + C
Sbjct: 253 LYLSSAGDVYSSEDHAISTTEPTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALT 312
Query: 157 -----YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
YSWG+ +G+LG G+ R P+ I + + V+CG HTA+++
Sbjct: 313 SAGEVYSWGSGEDGRLGHGEMRDRNVPRKIMALLRHR---IEYVSCGGSHTAVVSD---- 365
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY----LVSVDCGLFHTSVVS 267
+++ +TFG G NG+LG G T+ P++V P + + ++ V CG T +S
Sbjct: 366 ----QNLVFTFGRGRNGRLGLGDTKCHDTPQEV---PTWGFRKQRIIKVVCGWNFTIALS 418
Query: 268 SAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP--VQVAC 321
G V+SWG + GLG C D +SP LI K D V VAC
Sbjct: 419 LEGRVFSWGKQSEGQCGLGFCDQ---------DELSPCLIE-------KLLDNRIVDVAC 462
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
G H++ +T +++ SWG G G LG G
Sbjct: 463 GYTHSLALTSQ-HEVLSWGLGEYGQLGRG 490
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 83/306 (27%), Positives = 135/306 (44%), Gaps = 49/306 (16%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF 124
K H+ PI + G S+A+ +AG ++ WG+ + G + P +
Sbjct: 291 KALHRRPI--IHIACGAKHSVALTSAGEVYSWGS---GEDGRLGHGEMRDRNVPRKIMAL 345
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
H + V+CG H A+VS ++LV +++G NG+LGLGD + P+ + T+
Sbjct: 346 LRHRIEYVSCGGSHT-AVVS------DQNLV-FTFGRGRNGRLGLGDTKCHDTPQEVPTW 397
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQ 243
+ +V CG T L+ LE +++G GQ G G Q L P
Sbjct: 398 GFRKQ-RIIKVVCGWNFTIALS--------LEGRVFSWGKQSEGQCGLGFCDQDELSPCL 448
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAIS 299
+++L +V V CG H+ ++S +V SWG+ + G G+ S ++I
Sbjct: 449 IEKLLDN-RIVDVACGYTHSLALTSQHEVLSWGLGEYGQLGRGIVYQPS------PESID 501
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI------ 353
L + G H P ++ CGA H++ +T L++WG G G G T+
Sbjct: 502 QSLFACEGGH------PQRIYCGAFHSI-ITAGSKILYAWGLNSYGACGLGHTLNRDIPE 554
Query: 354 --DFFA 357
DFFA
Sbjct: 555 RNDFFA 560
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 13/134 (9%)
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G T S L P++V LP + + CG H +SSAGDV+S + +++
Sbjct: 221 GWSHTNSLLTPQKVDVLPGQS-IAEIACGGNHILYLSSAGDVYS---------SEDHAIS 270
Query: 291 RNEAGDAI-SPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
E + + +P L+ + P+ +ACGA H+V +T G +++SWG G G LG
Sbjct: 271 TTEPTNMLQTPQLVKELTLEKALHRRPIIHIACGAKHSVALTSAG-EVYSWGSGEDGRLG 329
Query: 349 TGKTIDFFAPAIVL 362
G+ D P ++
Sbjct: 330 HGEMRDRNVPRKIM 343
Score = 39.7 bits (91), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 77/194 (39%), Gaps = 40/194 (20%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALW 94
LGF + L PC+IE+ L D+ +I V G SLA+ + +
Sbjct: 436 LGFCDQDELSPCLIEKLL---------DN---------RIVDVACGYTHSLALTSQHEVL 477
Query: 95 MWGNCPLPDSSTEGGFSLVSSFTPSP------VWDFHGHTVVKVACGSEHVVALVSAGET 148
WG G + PSP ++ G ++ CG+ H ++++AG
Sbjct: 478 SWG------LGEYGQLGRGIVYQPSPESIDQSLFACEGGHPQRIYCGAFH--SIITAGSK 529
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ Y+WG N+ G GLG +R P+ + F V + CG +T L
Sbjct: 530 ------ILYAWGLNSYGACGLGHTLNRDIPERNDFFANIDTDVV--LCCGHKYTIALEVD 581
Query: 209 KRPNDMLESMCWTF 222
K P+ +S TF
Sbjct: 582 KVPSVSADSFGNTF 595
>gi|328870950|gb|EGG19322.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 2003
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/322 (29%), Positives = 146/322 (45%), Gaps = 57/322 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW----DFHGH- 127
KI S+ G +L + + G L+ +G+ + + G + + P P D H
Sbjct: 1301 KISSIATGYWHTLVLRSGGDLFAFGS----NEHGQLGLNDLKHHLPIPTRVNTADIHHAG 1356
Query: 128 ---TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
V + CG H V S G+ YS+GAN GQLG G ES PK+I+
Sbjct: 1357 QPTRVTGIFCGHSHSVLRTSHGD--------VYSFGANAKGQLGHGSTESCRYPKLIQGL 1408
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +TCG +HT + T D+ CW G GE+ LG G+ ++ LVP+ V
Sbjct: 1409 KGKN---IKRITCGPYHTVVTT------DLDSVYCW--GQGEHMCLGTGSNKNELVPKLV 1457
Query: 245 KELPQYVYLVSVDCGLFHTSVVS-------SAGDVWSWGMEK----GLGLCPNASLTRNE 293
EL + V CGL+HT+ ++ + G+V+ G + G+G P S + ++
Sbjct: 1458 -ELFVNKRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPR-SPSLDK 1515
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
A AI P + S N V +A GA L+T +G L+ WG G G +G GK
Sbjct: 1516 AYPAIIPSINSAN---------VVDLASGAEFNALITSNG-ALYMWGAGTHGQIGNGKNQ 1565
Query: 354 DFFAPAIVLWPPLTEEFKQDEL 375
D + P V L+ E Q++
Sbjct: 1566 DTWIPTRV---SLSSEKNQNQF 1584
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/308 (25%), Positives = 132/308 (42%), Gaps = 48/308 (15%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+ PI + S+ GG ++ ID + ++ WGN G S + P + +F G
Sbjct: 1247 QTPIMMMSL--GGEHTVVIDRSFHIYSWGNGKY--GQLGHGVSTPHNL-PKRIEEFAGQK 1301
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL----RPKIIETF 184
+ +A G H + L S G+ +++G+N +GQLGL D + L R +
Sbjct: 1302 ISSIATGYWHTLVLRSGGD--------LFAFGSNEHGQLGLNDLKHHLPIPTRVNTADIH 1353
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ P V + CG H+ L T ++FG GQLGHG+T+S P+ +
Sbjct: 1354 HAGQPTRVTGIFCGHSHSVLRTSHGD--------VYSFGANAKGQLGHGSTESCRYPKLI 1405
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ L + + + CG +HT V + V+ WG +G +C +NE + + ++
Sbjct: 1406 QGL-KGKNIKRITCGPYHTVVTTDLDSVYCWG--QGEHMCLGTGSNKNELVPKLVELFVN 1462
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVT------DDGYKLWSWGRGRSGVLGTG-----KTI 353
+ +V CG HT +T + G ++ G G LG G ++
Sbjct: 1463 ---------KRVERVVCGLYHTATLTQPMGDSNTGGNVYICGSSEHGKLGIGGDPRSPSL 1513
Query: 354 DFFAPAIV 361
D PAI+
Sbjct: 1514 DKAYPAII 1521
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 120/295 (40%), Gaps = 44/295 (14%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS---SFTPSPVWDFHGHTVVKV 132
SV G + I G L+ WGN ++S + G L + TP V ++ +
Sbjct: 1198 SVSCGWEHAAVITVDGELFTWGN----NTSGQLGHGLAAGKHQSTPMRVESLKQTPIMMM 1253
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G EH V + YSWG GQLG G PK IE F + +
Sbjct: 1254 SLGGEHTVVI--------DRSFHIYSWGNGKYGQLGHGVSTPHNLPKRIEEF---AGQKI 1302
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELP--- 248
+ G +HT +L + D+ + FG E+GQLG + L +P +V
Sbjct: 1303 SSIATGYWHTLVL---RSGGDL-----FAFGSNEHGQLGLNDLKHHLPIPTRVNTADIHH 1354
Query: 249 --QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q + + CG H+ + +S GDV+S+G L P LI
Sbjct: 1355 AGQPTRVTGIFCGHSHSVLRTSHGDVYSFGAN------AKGQLGHGSTESCRYPKLI--- 1405
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K ++ ++ CG HTV VT D ++ WG+G LGTG + P +V
Sbjct: 1406 --QGLKGKNIKRITCGPYHTV-VTTDLDSVYCWGQGEHMCLGTGSNKNELVPKLV 1457
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/249 (26%), Positives = 110/249 (44%), Gaps = 33/249 (13%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL--GLGDRESR 175
P P F+ V+CG EH + GE ++WG N +GQL GL + +
Sbjct: 1185 PMPALRFNEKHAKSVSCGWEHAAVITVDGE--------LFTWGNNTSGQLGHGLAAGKHQ 1236
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P +E+ Q + ++ G HT ++ +++G G+ GQLGHG +
Sbjct: 1237 STPMRVESLKQT---PIMMMSLGGEHTVVIDRSFH--------IYSWGNGKYGQLGHGVS 1285
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+P++++E + S+ G +HT V+ S GD++++G + + L N+
Sbjct: 1286 TPHNLPKRIEEFAGQ-KISSIATGYWHTLVLRSGGDLFAFGSNE------HGQLGLNDLK 1338
Query: 296 DAISPILISGNGPHGPKFQDPVQVA---CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ PI N P +V CG +H+VL T G ++S+G G LG G T
Sbjct: 1339 HHL-PIPTRVNTADIHHAGQPTRVTGIFCGHSHSVLRTSHG-DVYSFGANAKGQLGHGST 1396
Query: 353 IDFFAPAIV 361
P ++
Sbjct: 1397 ESCRYPKLI 1405
>gi|325183095|emb|CCA17552.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 545
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 96/333 (28%), Positives = 143/333 (42%), Gaps = 57/333 (17%)
Query: 32 DGQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DGQLG S+ P ++E +L+D + + G ++ + +
Sbjct: 11 DGQLGLGDTSDQYHPILVE---------ALQDR---------QTVQISCGSGHTVVLTDD 52
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G ++ WG D G F P V D V +V CGS H A+ +GE
Sbjct: 53 GKVYTWGR---GDDGRLGHGDNGWKFVPRLVEDLRDKKVRQVTCGSYHTAAVTVSGE--- 106
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
Y+WG G+LG G+ P ++E+ V +V CGS HT +L
Sbjct: 107 -----LYTWGGGMYGKLGHGNENGHSTPSLVESI---KGLYVRQVACGSRHTVVL----- 153
Query: 211 PNDMLESM-CWTFGLGENGQLGHG-TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
LE+ +T+G ENG GHG T+ P V EL + CG FHT+ +S
Sbjct: 154 ----LENQDVYTWGDKENGVSGHGDTSGHQYSPYCVSELVEINIKQISACG-FHTAALSE 208
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G V+++G K L N+ RN+ P+ + G + + QVACG HT
Sbjct: 209 NGQVFTFGEGKFGRLGHNSE--RNQ------PVAKCIDALIGKRIK---QVACGGFHTAA 257
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VT+ G+ +++WG G G LG G ++ P V
Sbjct: 258 VTESGH-VFTWGGGEHGQLGHGDKVNQIIPTRV 289
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/300 (29%), Positives = 131/300 (43%), Gaps = 56/300 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPSPVWDFHGHTVV 130
K+ V G + A+ +G L+ WG E G S TPS V G V
Sbjct: 87 KVRQVTCGSYHTAAVTVSGELYTWGGGMYGKLGHGNENGHS-----TPSLVESIKGLYVR 141
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACGS H V L+ E+ Y+WG NG G GD +Q SP+
Sbjct: 142 QVACGSRHTVVLL--------ENQDVYTWGDKENGVSGHGDTSG----------HQYSPY 183
Query: 191 AVYEVT---------CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
V E+ CG FHTA L+ +TFG G+ G+LGH + ++ V
Sbjct: 184 CVSELVEINIKQISACG-FHTAALSE--------NGQVFTFGEGKFGRLGHNSERNQPVA 234
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
+ + L + V CG FHT+ V+ +G V++WG + + L + + I P
Sbjct: 235 KCIDALIGK-RIKQVACGGFHTAAVTESGHVFTWGGGE------HGQLGHGDKVNQIIPT 287
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ +Q+ CG +HTV +TD G ++++WG G G LG T P ++
Sbjct: 288 RVE-----SLIDKNIIQLTCGWSHTVALTDKG-EVFTWGNGDHGKLGHNDTNKVTEPKLI 341
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 65/201 (32%), Positives = 105/201 (52%), Gaps = 28/201 (13%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
+ Y+WG +GQLGLGD + P ++E QD +++CGS HT +LT
Sbjct: 1 MTVYTWGRGEDGQLGLGDTSDQYHPILVEAL-QDRQ--TVQISCGSGHTVVLTD------ 51
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
+ +T+G G++G+LGHG VP V++L + V CG +HT+ V+ +G+++
Sbjct: 52 --DGKVYTWGRGDDGRLGHGDNGWKFVPRLVEDLRDK-KVRQVTCGSYHTAAVTVSGELY 108
Query: 274 SW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+W GM LG NE G + ++ S G + QVACG+ HTV++ +
Sbjct: 109 TWGGGMYGKLG-------HGNENGHSTPSLVESIKGLY------VRQVACGSRHTVVLLE 155
Query: 332 DGYKLWSWGRGRSGVLGTGKT 352
+ +++WG +GV G G T
Sbjct: 156 N-QDVYTWGDKENGVSGHGDT 175
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/180 (26%), Positives = 81/180 (45%), Gaps = 34/180 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWD----FH 125
I I + A G + A+ G ++ +G EG F + +S PV
Sbjct: 191 INIKQISACGFHTAALSENGQVFTFG---------EGKFGRLGHNSERNQPVAKCIDALI 241
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G + +VACG H A+ +G + +WG +GQLG GD+ +++ P +E+
Sbjct: 242 GKRIKQVACGGFHTAAVTESGHVF--------TWGGGEHGQLGHGDKVNQIIPTRVESLI 293
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ + ++TCG HT LT + +T+G G++G+LGH T P+ ++
Sbjct: 294 DKN---IIQLTCGWSHTVALTDKGE--------VFTWGNGDHGKLGHNDTNKVTEPKLIE 342
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 54/120 (45%), Gaps = 11/120 (9%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I V GG + A+ +G ++ WG + G V+ P+ V ++++
Sbjct: 244 RIKQVACGGFHTAAVTESGHVFTWGG---GEHGQLGHGDKVNQIIPTRVESLIDKNIIQL 300
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CG H VAL GE + +WG ++G+LG D PK+IETFN +V
Sbjct: 301 TCGWSHTVALTDKGEVF--------TWGNGDHGKLGHNDTNKVTEPKLIETFNSKRVISV 352
>gi|295696487|ref|YP_003589725.1| S-layer protein [Kyrpidia tusciae DSM 2912]
gi|295412089|gb|ADG06581.1| S-layer domain protein [Kyrpidia tusciae DSM 2912]
Length = 1423
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 130/285 (45%), Gaps = 50/285 (17%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+V AGG SL + + +W WG N L D +T G TP+P +V +
Sbjct: 73 AAVSAGGSHSLVLTSDQTVWAWGDNTNGQLGDGTTTG------RQTPTPAQGL--PSVAQ 124
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+ G H +AL G ++WG N++GQLG G P ++ DS
Sbjct: 125 VSAGESHSLALTDDGR--------VFAWGLNSSGQLGDGTTADSRTPVQVQGLATDSTIK 176
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V G H+ LT R + +G +GQLG+ +T + +P QV+ LP V
Sbjct: 177 V--VAAGGNHSLALTSDGR--------VFAWGKNSSGQLGNNSTVDSSIPVQVQGLPANV 226
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNG 307
V+ G H+ ++S G +++WG+ G G N+S +P+L++G
Sbjct: 227 TAVA--AGGNHSLALTSDGRIYAWGLNSSGQLGDGTTSNSS----------TPVLVAGL- 273
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P G K PV V+ G H++ + DG +++WG G LG G T
Sbjct: 274 PAGSK---PVAVSAGKDHSLALMQDG-TVYAWGGNSYGQLGNGTT 314
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 131/310 (42%), Gaps = 44/310 (14%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T + P + V AG SLA+ + G ++ WG L S G +
Sbjct: 102 LGDGTTTGRQTPTPAQGLPSVAQVSAGESHSLALTDDGRVFAWG---LNSSGQLGDGTTA 158
Query: 114 SSFTPSPVWDFHGHTVVKV-ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S TP V + +KV A G H +AL S G ++WG N++GQLG
Sbjct: 159 DSRTPVQVQGLATDSTIKVVAAGGNHSLALTSDGR--------VFAWGKNSSGQLGNNST 210
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
P ++ P V V G H+ LT R + +GL +GQLG
Sbjct: 211 VDSSIPVQVQGL----PANVTAVAAGGNHSLALTSDGR--------IYAWGLNSSGQLGD 258
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT ++ P V LP V+V G H+ + G V++WG G N + T +
Sbjct: 259 GTTSNSSTPVLVAGLPAGSKPVAVSAGKDHSLALMQDGTVYAWGGNS-YGQLGNGTTTAS 317
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
E P+ ++G + V+ G + ++ +T DGY +++WG SG LG G T
Sbjct: 318 EM-----PVQVTG-------LANVTAVSAGGSDSLALTSDGY-VYAWGLNSSGQLGDGTT 364
Query: 353 IDFFAPAIVL 362
+ P V
Sbjct: 365 SNRNTPVRVF 374
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+ G H + L S D ++WG N NGQLG G R P T Q P +
Sbjct: 75 VSAGGSHSLVLTS--------DQTVWAWGDNTNGQLGDGTTTGRQTP----TPAQGLP-S 121
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V+ G H+ LT R + +GL +GQLG GTT + P QV+ L
Sbjct: 122 VAQVSAGESHSLALTDDGR--------VFAWGLNSSGQLGDGTTADSRTPVQVQGLATDS 173
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V G H+ ++S G V++WG + L N D+ P+ + G
Sbjct: 174 TIKVVAAGGNHSLALTSDGRVFAWGKNS------SGQLGNNSTVDSSIPVQVQG------ 221
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
+ VA G H++ +T DG ++++WG SG LG G T + P +V P
Sbjct: 222 LPANVTAVAAGGNHSLALTSDG-RIYAWGLNSSGQLGDGTTSNSSTPVLVAGLP 274
>gi|345494033|ref|XP_001605647.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Nasonia
vitripennis]
Length = 4752
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 146/334 (43%), Gaps = 58/334 (17%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG G +S +VP ++E IK +V +GG LA+ + G
Sbjct: 3957 GRLGTGGVDSVMVPTLLESI----------------QHVFIKKVAVNSGGKHCLALSSEG 4000
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG D G + ++ P + G +V +ACG H A+ SAG
Sbjct: 4001 HVYSWGEG---DDGKLGHGNRITYDRPKLIEALLGTEIVDIACGGHHSAAISSAG----- 4052
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+WG G+LG GD + +L+P ++ + V +V CGS L
Sbjct: 4053 ---WLYTWGKGRYGRLGHGDSDDQLKPTVVTALQG---YKVIDVACGSGDAQTLCVTDDD 4106
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
N W++G G+ G+LG G + VP +++ L + +V V+CG + ++ +G
Sbjct: 4107 N------VWSWGDGDYGKLGRGGSDGCKVPMKIESLAG-LGVVKVECGSQFSVALTRSGA 4159
Query: 272 VWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG KG LG + + R A+ G K V +A G+ H V
Sbjct: 4160 VYTWG--KGDYHRLGHGTDDHVRRPRKVSAL----------QGKKI---VSIATGSLHCV 4204
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+D G ++++WG G LG G T +P +V
Sbjct: 4205 ACSDKG-EVYTWGDNDEGQLGDGTTHAQQSPRLV 4237
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 88/296 (29%), Positives = 134/296 (45%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + VS P + +
Sbjct: 3009 IKKVAVHSGGKHALALTQDGKVFSWGEG---EDGKLGHGNRVSLDKPRLIEALKSKRIRD 3065
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S GE Y+WG G+LG GD + L+PK+++
Sbjct: 3066 IACGSGHSAAIASNGE--------LYTWGLGEYGRLGHGDTTTHLKPKLVDALVGQR--- 3114
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + +++G G+ G+LG G + P V L
Sbjct: 3115 VIQVACGSRDAQTMALTE--------DGSVYSWGDGDFGKLGRGGSDGCYSPLPVDRL-N 3165
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ G+VW+WG KG LG + + R P L+
Sbjct: 3166 GLGVVQVECGAQFSLALTKYGEVWTWG--KGDYFRLGHGNDHHVRR--------PTLV-- 3213
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K V VA GA H + VTD G ++++WG G G G T+ P++V
Sbjct: 3214 EGLRGKKV---VHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGNGSTMVNRKPSLV 3265
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 113/247 (45%), Gaps = 34/247 (13%)
Query: 118 PSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P+ + + KVA G +H +AL G+ + SWG +G+LG G+R S
Sbjct: 2998 PKPIPFLSQYIIKKVAVHSGGKHALALTQDGKVF--------SWGEGEDGKLGHGNRVSL 3049
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+P++IE + ++ CGS H+A + +T+GLGE G+LGHG T
Sbjct: 3050 DKPRLIEALKSKR---IRDIACGSGHSAAIASNGE--------LYTWGLGEYGRLGHGDT 3098
Query: 236 QSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ L P+ V L Q V V+ T ++ G V+SWG + G L R +
Sbjct: 3099 TTHLKPKLVDALVGQRVIQVACGSRDAQTMALTEDGSVYSWG-DGDFG-----KLGRGGS 3152
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
SP+ + G VQV CGA ++ +T G ++W+WG+G LG G
Sbjct: 3153 DGCYSPLPVDRLNGLG-----VVQVECGAQFSLALTKYG-EVWTWGKGDYFRLGHGNDHH 3206
Query: 355 FFAPAIV 361
P +V
Sbjct: 3207 VRRPTLV 3213
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 106/255 (41%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + GG S AI +AG L+ WG G P+ V G+ V+ V
Sbjct: 4034 EIVDIACGGHHSAAISSAGWLYTWGKGRY---GRLGHGDSDDQLKPTVVTALQGYKVIDV 4090
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L +D +SWG + G+LG G + P IE+ + V
Sbjct: 4091 ACGSGDAQTLCVT------DDDNVWSWGDGDYGKLGRGGSDGCKVPMKIESL---AGLGV 4141
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CGS + LT +T+G G+ +LGHGT P +V L Q
Sbjct: 4142 VKVECGSQFSVALTR--------SGAVYTWGKGDYHRLGHGTDDHVRRPRKVSAL-QGKK 4192
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+VS+ G H S G+V++WG + GD + S H +
Sbjct: 4193 IVSIATGSLHCVACSDKGEVYTWGDND-----------EGQLGDGTTHAQQSPRLVHALQ 4241
Query: 313 FQDPVQVACGAAHTV 327
++ +VACG+AHT+
Sbjct: 4242 GKNITRVACGSAHTL 4256
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 120/274 (43%), Gaps = 35/274 (12%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
+ A+++WG L D GG P + +A GS+ + + G
Sbjct: 2918 VQQNAAVYVWG---LNDKDQLGGLKGSKIKLPVHSEVLSKLKPIHIAGGSKTLFVVSQEG 2974
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ Y+ G NG+LGLGD + PK I +Q V V G H LT
Sbjct: 2975 K--------LYACGEGTNGRLGLGDNNNVGEPKPIPFLSQYIIKKV-AVHSGGKHALALT 3025
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+ +++G GE+G+LGHG S P ++ L + + + CG H++ +
Sbjct: 3026 Q--------DGKVFSWGEGEDGKLGHGNRVSLDKPRLIEAL-KSKRIRDIACGSGHSAAI 3076
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--A 324
+S G++++WG+ + L + + P L+ Q +QVACG+ A
Sbjct: 3077 ASNGELYTWGLGE------YGRLGHGDTTTHLKPKLVD-----ALVGQRVIQVACGSRDA 3125
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
T+ +T+DG ++SWG G G LG G + ++P
Sbjct: 3126 QTMALTEDG-SVYSWGDGDFGKLGRGGSDGCYSP 3158
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 110/253 (43%), Gaps = 47/253 (18%)
Query: 118 PSPVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V+ F VV++A +H +AL + G + YSWG + G+LG GD S
Sbjct: 491 PQSVYGF-ADDVVQIASHPDGKHYLALTTKG--------IVYSWGNGDGGRLGHGDSFSC 541
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P++IE + + V + CGS ++A ++ ++L T+G G G+LGHG
Sbjct: 542 DEPQVIEVLSDRT---VTYIACGSTYSAAIS---STGELL-----TWGRGSYGRLGHGIC 590
Query: 236 QSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+P V L + V V+ G T V+++G V+SWG
Sbjct: 591 DDISIPTVVTALNGHTVTHVACGSGDSQTLCVTNSGIVFSWG-----------------D 633
Query: 295 GDAISPILISGNGPHGPKF------QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
GD +G PK Q+ V+V CG + +T G ++++WG+G LG
Sbjct: 634 GDYGKLGRGGSDGSKLPKIVDKLLDQNVVKVFCGGQFSAALTAHG-EVYTWGKGDHYRLG 692
Query: 349 TGKTIDFFAPAIV 361
G P +V
Sbjct: 693 HGNEEHVRFPKLV 705
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG + P E+ + P + G T +
Sbjct: 3897 YGWGHNHRGQLGGLEGAKVKLPLPCESLSALRPIQL----AGGEQTLFAV-------TAD 3945
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWS 274
+ G G G+LG G S +VP ++ + Q+V++ V+V+ G H +SS G V+S
Sbjct: 3946 GKVYATGYGALGRLGTGGVDSVMVPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGHVYS 4004
Query: 275 WGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG + LG + R + +A+ I V +ACG H+ ++
Sbjct: 4005 WGEGDDGKLGHGNRITYDRPKLIEALLGTEI-------------VDIACGGHHSAAISSA 4051
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L++WG+GR G LG G + D P +V
Sbjct: 4052 GW-LYTWGKGRYGRLGHGDSDDQLKPTVV 4079
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 93/217 (42%), Gaps = 29/217 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKV 132
+ + G S AI + G L WG S G + + P+ V +GHTV V
Sbjct: 555 VTYIACGSTYSAAISSTGELLTWGR----GSYGRLGHGICDDISIPTVVTALNGHTVTHV 610
Query: 133 ACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
ACGS + + ++G + +SWG + G+LG G + PKI++ +
Sbjct: 611 ACGSGDSQTLCVTNSG--------IVFSWGDGDYGKLGRGGSDGSKLPKIVDKLLDQN-- 660
Query: 191 AVYEVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CG F AL H + +T+G G++ +LGHG + P+ V+ L +
Sbjct: 661 -VVKVFCGGQFSAALTAHGE---------VYTWGKGDHYRLGHGNEEHVRFPKLVEGL-R 709
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
+ + G H ++ V+ WG + P+
Sbjct: 710 NKKVRDLSVGNLHILAITEDQLVYGWGRNDACQIDPS 746
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 14/148 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G +
Sbjct: 4122 GGSDGCKVPMKIESLAGLGVVKVECGSQFSVALTRSGAVYTWGKG---DYHRLGHGTDDH 4178
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G +V +A GS H VA GE Y +WG N+ GQLG G +
Sbjct: 4179 VRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVY--------TWGDNDEGQLGDGTTHA 4230
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+ P+++ + + V CGS HT
Sbjct: 4231 QQSPRLVHALQGKN---ITRVACGSAHT 4255
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ V+ G SLA+ G +W WG D G + P+ V G VV VA
Sbjct: 3169 VVQVECGAQFSLALTKYGEVWTWGKG---DYFRLGHGNDHHVRRPTLVEGLRGKKVVHVA 3225
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ AG+ Y+WG N++GQ G G +P ++ V
Sbjct: 3226 VGALHCLAVTDAGQV--------YAWGDNDHGQQGNGSTMVNRKPSLVHNLEDAK---VN 3274
Query: 194 EVTCGSFHT 202
V CGS H+
Sbjct: 3275 RVACGSSHS 3283
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 23/180 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
++A+ G+++ WG+ D G ++P PV +G VV+V CG++ +AL
Sbjct: 3127 TMALTEDGSVYSWGDG---DFGKLGRGGSDGCYSPLPVDRLNGLGVVQVECGAQFSLALT 3183
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
GE ++WG + +LG G+ RP ++E V V G+ H
Sbjct: 3184 KYGEV--------WTWGKGDYFRLGHGNDHHVRRPTLVEGLRGKK---VVHVAVGALHCL 3232
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+T + +G ++GQ G+G+T P V L + + V CG H+
Sbjct: 3233 AVTD--------AGQVYAWGDNDHGQQGNGSTMVNRKPSLVHNL-EDAKVNRVACGSSHS 3283
Score = 46.6 bits (109), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 52/110 (47%), Gaps = 4/110 (3%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ +AG ++ WG+ D +G S + + PS V + V +V
Sbjct: 3220 KVVHVAVGALHCLAVTDAGQVYAWGD---NDHGQQGNGSTMVNRKPSLVHNLEDAKVNRV 3276
Query: 133 ACGSEHVVALVSAGE-TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
ACGS H +A V + T ++ V + + GQ LG + + ++
Sbjct: 3277 ACGSSHSIAWVLTDQPTLGNQEPVTFPTAKDPLGQATLGFTQDKTETNVV 3326
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 41/95 (43%), Gaps = 3/95 (3%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + KI S+ G + +A + G ++ WG+ D G + +
Sbjct: 4174 GTDDHVRRPRKVSALQGKKIVSIATGSLHCVACSDKGEVYTWGD---NDEGQLGDGTTHA 4230
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
+P V G + +VACGS H +A + T+
Sbjct: 4231 QQSPRLVHALQGKNITRVACGSAHTLAWSTTKATH 4265
>gi|301755556|ref|XP_002913645.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC5-like
[Ailuropoda melanoleuca]
Length = 1035
Score = 95.9 bits (237), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG F+ + TP V G +V+++
Sbjct: 151 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIP--TPQAVEHLSGVPLVQIS 208
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G YSWG N+ GQLGLG + P +IET + V
Sbjct: 209 AGKAHSMALSMSGNV--------YSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ---VE 257
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + + +TFG G+ GQLGH +TQ+ L P V EL +
Sbjct: 258 FLACGGSHTALLT--------TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN-RV 308
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWG 276
+ CG HT + VS G V+S+G
Sbjct: 309 TQIACGRRHTLAYVSDLGKVFSFG 332
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 41/249 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 186
+++++ACG H +AL GE ++WG N +GQLG+G + + P+ +E
Sbjct: 150 SIIQIACGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRLFASIPTPQAVEHL-- 199
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T P ++
Sbjct: 200 -SGVPLVQISAGKAHSMALS--------MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIET 250
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS- 304
L Q V ++ CG HT+++++ G V+++G K L N + + P L++
Sbjct: 251 LDNQQVEFLA--CGGSHTALLTTDGLVFTFGAGK------YGQLGHNSTQNELRPRLVTE 302
Query: 305 --GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
GN Q+ACG HT+ D K++S+G G+ G LG G T + P + +
Sbjct: 303 LAGN--------RVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP-LPM 353
Query: 363 WPPLTEEFK 371
P EE K
Sbjct: 354 KLPSNEELK 362
>gi|301610125|ref|XP_002934599.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Xenopus
(Silurana) tropicalis]
Length = 4842
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 121/452 (26%), Positives = 184/452 (40%), Gaps = 81/452 (17%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGTLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q ++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFTRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG--------AEERDEKLSS-------AMEEMKLLQS 411
T+ K GLD + G A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFFHL 761
Query: 412 KLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRSK 465
+ S +ERY ++ I PF + +D GF + K N L A S
Sbjct: 762 R-SFLERYCEKINSEIPPPPFPSSRD------HHGFLKLCLKMLSNHLALALAGGVATSI 814
Query: 466 LVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 815 LGRQAGPLRNLLFRLMDASVPDEIQEVVIETL 846
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4075 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4131
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ +++G + G+LGLG+ ++ P+ + + +V CG HT
Sbjct: 4132 ADGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---LHIGQVACGLNHTL 4180
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ S+ W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4181 AVSADG-------SLVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4232
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN + P+L+ F D +A GA
Sbjct: 4233 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQLVPVLLG-------IFID--DIAVGA 4281
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ G ++++WG G LG G T P +V
Sbjct: 4282 EHTLALSASG-EVYAWGSNSEGQLGLGHTNHVREPTLV 4318
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGTLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P +V
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVV 608
Score = 46.2 bits (108), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4220 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQLVPVLLGIF 4273
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +A G+EH +AL ++GE Y +WG+N+ GQLGLG P ++ +
Sbjct: 4274 IDDIAVGAEHTLALSASGEVY--------AWGSNSEGQLGLGHTNHVREPTLVTALQGKN 4325
Query: 189 PWAVYEVTCGSFHTALLTHRKRP 211
+ +++ G H+A T P
Sbjct: 4326 ---IRQISAGRCHSAAWTAAPVP 4345
>gi|328715082|ref|XP_001946768.2| PREDICTED: e3 ubiquitin-protein ligase HERC2-like [Acyrthosiphon
pisum]
Length = 4404
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 83/318 (26%), Positives = 138/318 (43%), Gaps = 46/318 (14%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
G+LG N P V+ L G + ++ +V +GG LA+ G
Sbjct: 3607 GRLGIGPYNPKNPYVVTPQLVQGLNNIIK-------------VAVNSGGRHCLALSTTGE 3653
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
++ WG+ D G + V+ P V ++ +ACG H A+ G
Sbjct: 3654 VYAWGD---GDDGKLGLGNRVTHSKPQLVQSLSDKCIIDIACGGFHSAAISRYGH----- 3705
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
Y+WG G+LG GD E L PK+++ + V +V CGS + N
Sbjct: 3706 ---LYTWGKGRYGRLGHGDYEDYLYPKLVQGLIN---YHVVKVACGSGDAQTMCVTSDDN 3759
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
W++G G+ G+LGH ++S +P +++ L ++ +DCG + +S+ G +
Sbjct: 3760 ------VWSWGDGDYGKLGHNISESCKLPCKIESLSGK-GIIQIDCGSQFSVALSANGTL 3812
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
++WG L +S E P+ +G G K VQ + G+ H + +TDD
Sbjct: 3813 YTWGKGDYFRLGHGSS----EHVRKPKPV----SGLQGKKI---VQFSTGSLHVLALTDD 3861
Query: 333 GYKLWSWGRGRSGVLGTG 350
G ++++WG G LG G
Sbjct: 3862 G-EVYAWGDNDEGQLGDG 3878
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 116/247 (46%), Gaps = 34/247 (13%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
TP V + V V G H +AL + GE Y +WG ++G+LGLG+R +
Sbjct: 3623 TPQLVQGLNNIIKVAVNSGGRHCLALSTTGEVY--------AWGDGDDGKLGLGNRVTHS 3674
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
+P+++++ S + ++ CG FH+A ++ +T+G G G+LGHG +
Sbjct: 3675 KPQLVQSL---SDKCIIDIACGGFHSAAISRYGH--------LYTWGKGRYGRLGHGDYE 3723
Query: 237 SALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
L P+ V+ L Y ++V V CG T V+S +VWSWG + G L N +
Sbjct: 3724 DYLYPKLVQGLINY-HVVKVACGSGDAQTMCVTSDDNVWSWG-DGDYG-----KLGHNIS 3776
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P I G +Q+ CG+ +V ++ +G L++WG+G LG G +
Sbjct: 3777 ESCKLPCKIESLSGKG-----IIQIDCGSQFSVALSANG-TLYTWGKGDYFRLGHGSSEH 3830
Query: 355 FFAPAIV 361
P V
Sbjct: 3831 VRKPKPV 3837
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 127/294 (43%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG ++A+ G + WG+ + G +++ TP + V
Sbjct: 2680 IKTVAVHSGGKHAMALSLDGKVLSWGD---GEDGKLGHGDILTLDTPKLIDSLLAKRVFY 2736
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S GE Y+WG G+LG D S+ PK+++ F +
Sbjct: 2737 IACGSAHSAAITSDGE--------LYTWGQGQYGRLGHSDEVSQHTPKLVKEFVGKN--- 2785
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS L N +++G G+ G+LG G + P++V+ L +
Sbjct: 2786 ITQVACGSRDAQTLALDSEGN------VYSWGDGDFGKLGRGGSDGCCTPQKVERLVGH- 2838
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V ++CG + +++ G VW+WG KG LGL + R + + + I
Sbjct: 2839 RVVQIECGAQFSVALTATGQVWTWG--KGEYYRLGLGRGEHVRRPTLVNQLKLVTID--- 2893
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G H + V+ G ++ WG G G G T P +V
Sbjct: 2894 ----------HIAVGTLHCIAVSTQG-DVYCWGDNDHGQQGNGTTNANQEPRLV 2936
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 98/220 (44%), Gaps = 32/220 (14%)
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
T+ G V Y WG N+ GQL D +P ++ + P V F A+ ++
Sbjct: 3538 TWGGNGQVVYVWGHNHRGQLACMDSSQVKKPLACDSLSVLKPTQVIGGEQTMF--AVTSY 3595
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHG----TTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
K + G E+G+LG G + P+ V+ L + V+V+ G H
Sbjct: 3596 GK---------VYASGYTESGRLGIGPYNPKNPYVVTPQLVQGLNNIIK-VAVNSGGRHC 3645
Query: 264 SVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+S+ G+V++WG + LGL + ++ + ++S I + +AC
Sbjct: 3646 LALSTTGEVYAWGDGDDGKLGLGNRVTHSKPQLVQSLSDKCI-------------IDIAC 3692
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G H+ ++ G+ L++WG+GR G LG G D+ P +V
Sbjct: 3693 GGFHSAAISRYGH-LYTWGKGRYGRLGHGDYEDYLYPKLV 3731
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 69/171 (40%), Gaps = 33/171 (19%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG + S S +PC IE G I + G S+A+ G
Sbjct: 3769 GKLGHNISESCKLPCKIESLSGKG------------------IIQIDCGSQFSVALSANG 3810
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
L+ WG D G S P PV G +V+ + GS HV+AL GE
Sbjct: 3811 TLYTWGK---GDYFRLGHGSSEHVRKPKPVSGLQGKKIVQFSTGSLHVLALTDDGEV--- 3864
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
Y+WG N+ GQLG G RP+ I + +V+CGS H+
Sbjct: 3865 -----YAWGDNDEGQLGDGTAHPIARPRPIAALKGKR---IQQVSCGSAHS 3907
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 102/268 (38%), Gaps = 46/268 (17%)
Query: 95 MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDL 154
M N +S+ F V F P P K+ SE+ V
Sbjct: 2556 MIINQEFVSNSSTPQFDAVQEFPPQP------EVESKIRVDSEYAV-------------- 2595
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
Y WG N+ GQLG + RP E P E+ GS ++++
Sbjct: 2596 --YVWGLNDKGQLGGLNGSKVKRPTFNEALTALKP---IEIVGGSKSLFIVSN------- 2643
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVW 273
E + G G+LG P Q+ L Q+V V+V G H +S G V
Sbjct: 2644 -EGKVFVCGDSSGGRLGIPFCGKVSSPRQIPGLSQFVIKTVAVHSGGKHAMALSLDGKVL 2702
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWG + L LT + +P LI + +ACG+AH+ +T DG
Sbjct: 2703 SWGDGEDGKLGHGDILTLD------TPKLIDSLLAKRVFY-----IACGSAHSAAITSDG 2751
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG+G+ G LG + P +V
Sbjct: 2752 -ELYTWGQGQYGRLGHSDEVSQHTPKLV 2778
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+LA+D+ G ++ WG+ D G TP V GH VV++ CG++ VAL
Sbjct: 2798 TLALDSEGNVYSWGD---GDFGKLGRGGSDGCCTPQKVERLVGHRVVQIECGAQFSVALT 2854
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ ++WG +LGLG E RP ++ NQ + + G+ H
Sbjct: 2855 ATGQV--------WTWGKGEYYRLGLGRGEHVRRPTLV---NQLKLVTIDHIAVGTLHCI 2903
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
++ + + CW G ++GQ G+GTT + P V + + V CG
Sbjct: 2904 AVSTQG------DVYCW--GDNDHGQQGNGTTNANQEPRLVTNFNN-IKINRVGCG 2950
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 14/127 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ ++ G S+A+ G +W WG G + P+ V T+ +
Sbjct: 2839 RVVQIECGAQFSVALTATGQVWTWGKGEYYRLGLGRGEHVRR---PTLVNQLKLVTIDHI 2895
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G+ H +A+ + G+ Y WG N++GQ G G + P+++ FN +
Sbjct: 2896 AVGTLHCIAVSTQGDV--------YCWGDNDHGQQGNGTTNANQEPRLVTNFNN---IKI 2944
Query: 193 YEVTCGS 199
V CGS
Sbjct: 2945 NRVGCGS 2951
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 70/289 (24%), Positives = 108/289 (37%), Gaps = 53/289 (18%)
Query: 58 DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF- 116
DSL + K P+K SV LA+ G ++ WG + + G SSF
Sbjct: 480 DSLNFEEKQMMNVPMK--SVDVYDETYLAVTQKGEVYSWG---VNEFGALGHGQKYSSFP 534
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
TP P+ F VV V+CG + A+ G+ Y WG L
Sbjct: 535 TPEPIVAFSKLIVVMVSCGKDFCAAVTEDGK--------LYMWGK------ILHSSNCCY 580
Query: 177 RPKIIETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P+++++ S W V +V+CG S + L R E ++F N G
Sbjct: 581 TPELVKSI---SEWHVSKVSCGSSINNTLALSR-------EGYVFSFEY-RNSDRGCDDK 629
Query: 236 QSALVPEQVKELPQYVY-LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
++P + + Y +VS+ C +V+ A +V++WG L N S N
Sbjct: 630 SLNVIPSMI----VFDYEIVSIYCHNDVNAVIDCANNVFTWGRGNNNMLGHNNSFRVNR- 684
Query: 295 GDAISPILISGNGPHGPKFQDPVQVA--CGAAHTVLVTDDGYKLWSWGR 341
P KF QV A +L D +++ WG+
Sbjct: 685 -------------PKEVKFLSGKQVTSLSLADDYILALTDTGQVYCWGQ 720
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 101/260 (38%), Gaps = 41/260 (15%)
Query: 105 STEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNN 164
+T G +S S +F ++ V S V T KGE YSWG N
Sbjct: 467 TTSGTLHFISYSIDS--LNFEEKQMMNVPMKSVDVYDETYLAVTQKGE---VYSWGVNEF 521
Query: 165 GQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
G LG G + S P+ I F S V V+CG A +T + W
Sbjct: 522 GALGHGQKYSSFPTPEPIVAF---SKLIVVMVSCGKDFCAAVTEDGKL------YMW--- 569
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG--LFHTSVVSSAGDVWSWGMEKGL 281
G++ H ++ PE VK + ++ ++ V CG + +T +S G V+S+
Sbjct: 570 ----GKILH-SSNCCYTPELVKSISEW-HVSKVSCGSSINNTLALSREGYVFSFEYRNSD 623
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
C + SL + P +I + + V + C ++ D +++WGR
Sbjct: 624 RGCDDKSLN-------VIPSMIVFD-------YEIVSIYCHNDVNAVI-DCANNVFTWGR 668
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G + +LG + P V
Sbjct: 669 GNNNMLGHNNSFRVNRPKEV 688
>gi|401396776|ref|XP_003879904.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
gi|325114312|emb|CBZ49869.1| hect E3 ubiquitin ligase, related [Neospora caninum Liverpool]
Length = 1080
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 88/308 (28%), Positives = 131/308 (42%), Gaps = 72/308 (23%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHT 128
I SV AGGM + +G L+MWG C ++EG + P V G
Sbjct: 111 INSASVAAGGMQMAVVSQSGELYMWG-C-----NSEGQLGTGDRRDASVPRVVKALQGKI 164
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------------------- 169
V VAC EH V + +D Y+WG NG+LGL
Sbjct: 165 VKVVACAQEHTVCCL--------DDGSAYAWGCALNGRLGLHGLSIPSSAGLGVSAPPGA 216
Query: 170 ---GDRESRL-------RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G R L P+++E+ + + +V CG +HTA L ++ L
Sbjct: 217 PTKGARTEPLASACLVCTPRVLESLCG---YFITDVACGIYHTAFLGVYEQHKTSL---- 269
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T GLG NG+LGHG + +P V L + + + ++ CG HT+ V+S G ++ WG
Sbjct: 270 FTCGLGLNGRLGHGDEEDRHLPTPVHAL-ENLNITAIACGAHHTACVTSGGTLYMWGGAA 328
Query: 280 ----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
GLG + L G + + + V VA G+ H+ VT DG +
Sbjct: 329 FGKLGLGSTRGSQLLPKHVGGPL-------------RNKTVVSVALGSQHSACVTTDG-E 374
Query: 336 LWSWGRGR 343
L++WG+GR
Sbjct: 375 LYTWGQGR 382
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 79/168 (47%), Gaps = 24/168 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P+PV + +ACG+ H + S G Y WG G+LGLG R S+L
Sbjct: 291 PTPVHALENLNITAIACGAHHTACVTSGG--------TLYMWGGAAFGKLGLGSTRGSQL 342
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
PK + ++ V V GS H+A +T + +T+G G +LGH
Sbjct: 343 LPKHVGGPLRNK--TVVSVALGSQHSACVT--------TDGELYTWGQGR--RLGHEVQG 390
Query: 237 SA--LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
+ +P +V+ L ++++ V CG HT+ + G+VW+WG + LG
Sbjct: 391 ESDEFLPRRVEAL-VGLFVIHVVCGDAHTACIVENGNVWAWGTSRILG 437
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 101/269 (37%), Gaps = 57/269 (21%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ S +P V G VA G + + +GE Y WG N+ GQLG GDR
Sbjct: 97 LESSSPRLVDALKGINSASVAAGGMQMAVVSQSGELYM--------WGCNSEGQLGTGDR 148
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG- 231
P++++ V V C HT + + + +G NG+LG
Sbjct: 149 RDASVPRVVKALQGK---IVKVVACAQEHTVCC--------LDDGSAYAWGCALNGRLGL 197
Query: 232 HGTT--------------------------QSALV--PEQVKELPQYVYLVSVDCGLFHT 263
HG + + LV P ++ L Y ++ V CG++HT
Sbjct: 198 HGLSIPSSAGLGVSAPPGAPTKGARTEPLASACLVCTPRVLESLCGY-FITDVACGIYHT 256
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ + + GLGL N L + D P + H + + +ACGA
Sbjct: 257 AFLGVYEQHKTSLFTCGLGL--NGRLGHGDEEDRHLPTPV-----HALENLNITAIACGA 309
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
HT VT G L+ WG G LG G T
Sbjct: 310 HHTACVTSGG-TLYMWGGAAFGKLGLGST 337
>gi|296196028|ref|XP_002745648.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Callithrix jacchus]
Length = 1024
Score = 95.5 bits (236), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 97/205 (47%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ P V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTAPQIVEHLAGIPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGL ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNEFGQLGLDHTESKDSPSLIEALDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG HTALLT + + +TFG G++GQLGH +TQ+ L P V EL
Sbjct: 246 EFLACGGSHTALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELAGN-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 112/235 (47%), Gaps = 40/235 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTAPQIVEHL--- 188
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ + +++ G H+ L+ + +++G E GQLG T+S P ++ L
Sbjct: 189 AGIPLAQISAGEAHSMALS--------MSGNIYSWGKNEFGQLGLDHTESKDSPSLIEAL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS-- 304
Q V ++ CG HT++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFLA--CGGSHTALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 305 -GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
GN Q+ACG HT+ D K++S+G G+ G LG G T D P
Sbjct: 293 AGN--------RVTQIACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTRDQLIP 339
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 94/215 (43%), Gaps = 37/215 (17%)
Query: 31 MDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+ GQLG V +F + AP +E H A I + + AG S+A+ +
Sbjct: 166 LHGQLG----------VGRKFPSTTAPQIVE------HLAGIPLAQISAGEAHSMALSMS 209
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G ++ WG + G S +PS + V +ACG H L G
Sbjct: 210 GNIYSWGK---NEFGQLGLDHTESKDSPSLIEALDNQKVEFLACGGSHTALLTQDG---- 262
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +++GA +GQLG ++ LRP ++ + V ++ CG +HT
Sbjct: 263 ----LLFTFGAGKHGQLGHNSTQNELRPCLVAELAGNR---VTQIACGRWHTLAYV---- 311
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+D+ ++FG G+ GQLG+G T+ L+P +K
Sbjct: 312 -SDL--GKVFSFGSGKEGQLGNGGTRDQLIPLPMK 343
>gi|281344276|gb|EFB19860.1| hypothetical protein PANDA_001439 [Ailuropoda melanoleuca]
Length = 993
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG F+ + TP V G +V+++
Sbjct: 108 IIQIACGDYHSLALSKGGELFAWGQNLHGQLGVGRLFASIP--TPQAVEHLSGVPLVQIS 165
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G YSWG N+ GQLGLG + P +IET + V
Sbjct: 166 AGKAHSMALSMSGNV--------YSWGRNDLGQLGLGHTDGEDFPSLIETLDNQQ---VE 214
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + + +TFG G+ GQLGH +TQ+ L P V EL +
Sbjct: 215 FLACGGSHTALLT--------TDGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN-RV 265
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWG 276
+ CG HT + VS G V+S+G
Sbjct: 266 TQIACGRRHTLAYVSDLGKVFSFG 289
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 41/249 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 186
+++++ACG H +AL GE ++WG N +GQLG+G + + P+ +E
Sbjct: 107 SIIQIACGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRLFASIPTPQAVEHL-- 156
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T P ++
Sbjct: 157 -SGVPLVQISAGKAHSMALS--------MSGNVYSWGRNDLGQLGLGHTDGEDFPSLIET 207
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS- 304
L Q V ++ CG HT+++++ G V+++G K L N + + P L++
Sbjct: 208 LDNQQVEFLA--CGGSHTALLTTDGLVFTFGAGK------YGQLGHNSTQNELRPRLVTE 259
Query: 305 --GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
GN Q+ACG HT+ D K++S+G G+ G LG G T + P + +
Sbjct: 260 LAGN--------RVTQIACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP-LPM 310
Query: 363 WPPLTEEFK 371
P EE K
Sbjct: 311 KLPSNEELK 319
>gi|355694501|gb|AER99690.1| hect domain and RLD 5 [Mustela putorius furo]
Length = 675
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 100/206 (48%), Gaps = 27/206 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
I + G SLA+ G L+ WG + + G + + P+P V G +V+
Sbjct: 49 IIQITCGDYHSLALSKGGELFAWGQ----NLHGQLGIGRLFASIPTPQLVEHLSGVPLVQ 104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ G H +AL +G YSWG N+ GQLGLG + P ++E +
Sbjct: 105 ISAGKAHSMALSMSGN--------IYSWGRNDLGQLGLGHTDGEEFPSLVEALDSQK--- 153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + CG HTALLT + +TFG G++GQLGH +TQ+ L P V EL +
Sbjct: 154 VEFLACGGSHTALLTE--------DGQVFTFGAGKHGQLGHNSTQNELRPRLVTELTG-I 204
Query: 252 YLVSVDCGLFHT-SVVSSAGDVWSWG 276
+ V CG HT + VS G V+S+G
Sbjct: 205 RVTQVACGRRHTLAYVSDLGKVFSFG 230
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 114/239 (47%), Gaps = 34/239 (14%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 186
+++++ CG H +AL GE ++WG N +GQLG+G + + P+++E
Sbjct: 48 SIIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGIGRLFASIPTPQLVEHL-- 97
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T P V+
Sbjct: 98 -SGVPLVQISAGKAHSMALS--------MSGNIYSWGRNDLGQLGLGHTDGEEFPSLVEA 148
Query: 247 L-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Q V ++ CG HT++++ G V+++G K + L N + + P L++
Sbjct: 149 LDSQKVEFLA--CGGSHTALLTEDGQVFTFGAGK------HGQLGHNSTQNELRPRLVTE 200
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G + QVACG HT+ D K++S+G G+ G LG G T + P + P
Sbjct: 201 LT--GIRV---TQVACGRRHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIPLPMKLP 254
>gi|242008674|ref|XP_002425127.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212508801|gb|EEB12389.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 1044
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 109/246 (44%), Gaps = 45/246 (18%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF+G+ +P +I+ A I + G SLA+ N G
Sbjct: 114 GQLGFNGTTQPLPKIIKSL------------------ATFHIVQISCGKNHSLALTNNGE 155
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVACGSEHVVALVSAGETYK 150
L+ WG + + G + S + P + G + +ACGS H AL +G
Sbjct: 156 LYSWGG----NYDGQLGLGMRSEYEKQPTLIKSLLGIPIAFIACGSNHSFALSKSG---- 207
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
Y WG N GQLGL D E++L P ++T V + CG +A L+
Sbjct: 208 ----AIYGWGKNTYGQLGLNDEENKLHPTQLKTLRS---IRVKYIACGEDFSAFLS---- 256
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSA 269
+ +T G G GQLGHG+T + ++P ++ EL + V CG HT ++V S
Sbjct: 257 ----ADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGST-VTQVSCGKRHTLALVPSR 311
Query: 270 GDVWSW 275
G V+S+
Sbjct: 312 GRVYSF 317
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 48/299 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + GG +LA + G L+ WG+ DS + GF+ + P + +V++
Sbjct: 85 RITKISCGGNHTLAFNEWGQLFGWGS----DSHGQLGFNGTTQPLPKIIKSLATFHIVQI 140
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL + GE YSWG N +GQLGLG R E +P +I++ P A
Sbjct: 141 SCGKNHSLALTNNGE--------LYSWGGNYDGQLGLGMRSEYEKQPTLIKSL-LGIPIA 191
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQ 249
+ CGS H+ L+ +G G+N GQLG ++ L P Q+K L +
Sbjct: 192 F--IACGSNHSFALSKSGA----------IYGWGKNTYGQLGLNDEENKLHPTQLKTL-R 238
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 305
+ + + CG ++ +S+ G V++ G + G G N L R S +
Sbjct: 239 SIRVKYIACGEDFSAFLSADGGVFTCGAGMYGQLGHGSTSNEILPRKIMELMGSTV---- 294
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
QV+CG HT+ + +++S+G G G LGT + P +VL P
Sbjct: 295 -----------TQVSCGKRHTLALVPSRGRVYSFGLGGGGQLGTRVKTNCSTPQVVLGP 342
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/245 (26%), Positives = 110/245 (44%), Gaps = 42/245 (17%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
GG F P + V +V G H V L +GE +S G N+ Q
Sbjct: 15 GGIEHDQIFAPIEHTFKYASNVSQVTMGENHTVMLTKSGEV--------FSCGNNDLDQ- 65
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
LG ++ R +P+ +E + + + +++CG HT N+ + W G +
Sbjct: 66 -LGHKKQRTKPEKVEGLDF---YRITKISCGGNHTLAF------NEWGQLFGW--GSDSH 113
Query: 228 GQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLC 284
GQLG +GTTQ +P+ +K L + ++V + CG H+ +++ G+++SWG + LGL
Sbjct: 114 GQLGFNGTTQP--LPKIIKSLATF-HIVQISCGKNHSLALTNNGELYSWGGNYDGQLGLG 170
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGR 343
+ + P LI P+ +ACG+ H+ ++ G ++ WG+
Sbjct: 171 MRSEYEK-------QPTLIKS------LLGIPIAFIACGSNHSFALSKSG-AIYGWGKNT 216
Query: 344 SGVLG 348
G LG
Sbjct: 217 YGQLG 221
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 89/197 (45%), Gaps = 31/197 (15%)
Query: 157 YSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG+ +G+LGLG E ++ I TF S V +VT G HT +LT
Sbjct: 2 YCWGSTVHGELGLGGIEHDQIFAPIEHTFKYAS--NVSQVTMGENHTVMLTKSGE----- 54
Query: 216 ESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
F G N QLGH ++ PE+V+ L Y + + CG HT + G ++
Sbjct: 55 -----VFSCGNNDLDQLGHKKQRTK--PEKVEGLDFY-RITKISCGGNHTLAFNEWGQLF 106
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
WG + + L N + I+ S H VQ++CG H++ +T++G
Sbjct: 107 GWGSDS------HGQLGFNGTTQPLPKIIKSLATFH------IVQISCGKNHSLALTNNG 154
Query: 334 YKLWSWGRGRSGVLGTG 350
+L+SWG G LG G
Sbjct: 155 -ELYSWGGNYDGQLGLG 170
>gi|298713261|emb|CBJ26957.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 530
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 114/255 (44%), Gaps = 42/255 (16%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G+SL P PV F G+ V KVAC H V + +D +++G N GQLG
Sbjct: 148 GYSL-----PRPVAGFAGYRVTKVACSYSHTVVVT--------DDDRTWTFGGNGYGQLG 194
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
GD SR P + F V V CG +HT + + ++FG ++G
Sbjct: 195 HGDHSSRSAPAALACFQG---LGVLSVACGVYHTVV--------SVASGGLYSFGKNDHG 243
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPN 286
QLG +S P Q + V ++ CG +HT +S AG+V ++G LGL
Sbjct: 244 QLGLEGGESRFTPVQHRACTSVVEQLA--CGYYHTVALSRAGEVVAFGRNDYGQLGLGHR 301
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
S + ++ + I +QVACG+ HT+ + D+G +++ +GR G
Sbjct: 302 ESTWQGGQVPDLAGLRI-------------IQVACGSYHTISLDDEG-RVYPFGRNNHGQ 347
Query: 347 LGTGKTIDFFAPAIV 361
LGTG D P V
Sbjct: 348 LGTGTREDACRPCFV 362
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 88/191 (46%), Gaps = 37/191 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV-KV 132
+ SV +GG+ S ++ G L + EGG S FTP V +VV ++
Sbjct: 226 VVSVASGGLYSFGKNDHGQLGL-----------EGG---ESRFTP--VQHRACTSVVEQL 269
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H VAL AGE ++G N+ GQLGLG RES + + + +
Sbjct: 270 ACGYYHTVALSRAGEVV--------AFGRNDYGQLGLGHRESTWQGGQVPDL---AGLRI 318
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CGS+HT L R + FG +GQLG GT + A P V+ L Q +
Sbjct: 319 IQVACGSYHTISLDDEGR--------VYPFGRNNHGQLGTGTREDACRPCFVEGLSQ-SF 369
Query: 253 LVSVDCGLFHT 263
+ V G +HT
Sbjct: 370 VCQVAAGFYHT 380
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
Query: 64 SKTNHKAPIKICSVKAGGMM-SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW 122
+ H+A + A G ++A+ AG + +G D G S++ V
Sbjct: 255 TPVQHRACTSVVEQLACGYYHTVALSRAGEVVAFGR---NDYGQLGLGHRESTWQGGQVP 311
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
D G +++VACGS H ++L G Y +G NN+GQLG G RE RP +E
Sbjct: 312 DLAGLRIIQVACGSYHTISLDDEGRVYP--------FGRNNHGQLGTGTREDACRPCFVE 363
Query: 183 TFNQDSPWAVYEVTCGSFHTALLT 206
+Q V +V G +HT LT
Sbjct: 364 GLSQS---FVCQVAAGFYHTLCLT 384
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 112/299 (37%), Gaps = 98/299 (32%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD----- 171
TP+ G +V V G+E L + GE YS G N+ GQ G+G+
Sbjct: 34 TPTLSQTSRGKDIVGVTAGNELTAVLTNTGEV--------YSCGYNSEGQCGIGEIDETV 85
Query: 172 ------------RESRLRP---------------------------------------KI 180
RE RP ++
Sbjct: 86 PEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLVVVTEEGELQTCGRNNSGQLGHGEV 145
Query: 181 IETFNQDSPWA------VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
+ ++ P A V +V C HT ++T R WTFG GQLGHG
Sbjct: 146 GKGYSLPRPVAGFAGYRVTKVACSYSHTVVVTDDDRT--------WTFGGNGYGQLGHGD 197
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRN 292
S P + Q + ++SV CG++HT V ++G ++S+G LGL
Sbjct: 198 HSSRSAPAALACF-QGLGVLSVACGVYHTVVSVASGGLYSFGKNDHGQLGL--------- 247
Query: 293 EAGDA-ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
E G++ +P+ H Q+ACG HTV ++ G ++ ++GR G LG G
Sbjct: 248 EGGESRFTPV------QHRACTSVVEQLACGYYHTVALSRAG-EVVAFGRNDYGQLGLG 299
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 90/218 (41%), Gaps = 37/218 (16%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y +G N G+LGLGD R P + +T + VT G+ TA+LT+
Sbjct: 14 YGFGQNACGELGLGDTLERHTPTLSQTSRGKD---IVGVTAGNELTAVLTNTGE------ 64
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKEL-------PQY-----VYLVSVDCGLFHTS 264
++ G GQ G G VPE V L P + V LV G H
Sbjct: 65 --VYSCGYNSEGQCGIGEIDET-VPEMVPSLTKVTLREPSFRPAGRVSLVHSGNGSEHLV 121
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGA 323
VV+ G++ + G + L E G S P ++G + +VAC
Sbjct: 122 VVTEEGELQTCGRNN------SGQLGHGEVGKGYSLPRPVAGFAGY-----RVTKVACSY 170
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+HTV+VTDD + W++G G LG G APA +
Sbjct: 171 SHTVVVTDDD-RTWTFGGNGYGQLGHGDHSSRSAPAAL 207
>gi|345324538|ref|XP_003430830.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Ornithorhynchus
anatinus]
Length = 3053
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 133/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ + G ++ WG + G + P V G VV
Sbjct: 2258 VKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVVESLRGIEVVD 2314
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + AG+ YSWG G+LG GD E +L+PK++E +
Sbjct: 2315 IAAGGAHSACITVAGD--------LYSWGKGRYGRLGHGDSEDQLKPKLVEALQG---YR 2363
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 2364 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 2414
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 2415 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 2462
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 2463 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 2514
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 114/243 (46%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VKVA S+ H +AL + GE + SWG + G+LG GD
Sbjct: 186 TLGPQLVQGLASRNIVKVAAHSDGHHYLALAATGEVF--------SWGCGDGGRLGHGDT 237
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I + + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 238 VPLEEPKMISALSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 289
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG L
Sbjct: 290 HGSSEDQTIPMLVTGL-KGLKVIDVSCGSGDAQTLAVTENGQVWSWGDGD------YGKL 342
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 343 GRGGSDGCKTPKLIE-------KLQDLDIVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 394
Query: 348 GTG 350
G G
Sbjct: 395 GHG 397
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 99/205 (48%), Gaps = 21/205 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG ++A+ G ++ WG D G FS ++ P + +
Sbjct: 1237 VKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 1293
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 1294 IACGSSHSAAITSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 1342
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ VP+ ++ L
Sbjct: 1343 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNVPQNIERL-NGQ 1395
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+ ++CG + ++ +G VW+WG
Sbjct: 1396 GVCQIECGAQFSLALTKSGVVWTWG 1420
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 127/282 (45%), Gaps = 55/282 (19%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 1188 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPLPRQITALSNYVVKKVA 1241
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H +AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 1242 VHSGGRHAMALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 1290
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A +T +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 1291 IRDIACGSSHSAAITS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 1341
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 1342 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNVPQN---------IERL 1392
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
NG Q Q+ CGA ++ +T G +W+WGRG G L
Sbjct: 1393 NG------QGVCQIECGAQFSLALTKSGV-VWTWGRGDFGEL 1427
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 134/295 (45%), Gaps = 44/295 (14%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
EDD K N + I+ KA G+ S A +++WG L D GG PS
Sbjct: 1123 EDDEKANAGSLIR---KKASGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 1175
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y + G NG+LGLG + P+
Sbjct: 1176 SETLSALNVVQVAGGSKSLFAVTVEGKVY--------ACGEATNGRLGLGISSGTVPLPR 1227
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 1228 QITAL---SNYVVKKVAVHSGGRHAMALT--------VDGKVFSWGEGDDGKLGHFSRMN 1276
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
P ++ L + + + CG H++ ++S+G++++WG+ + L +
Sbjct: 1277 CDKPRLIEAL-KTKRIRDIACGSSHSAAITSSGELYTWGLGE------YGRLGHGDNTTQ 1329
Query: 298 ISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ P ++ H +QVACG+ A T+ +TD+G ++SWG G G LG G
Sbjct: 1330 LKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRG 1378
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 118/269 (43%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 2164 TLSAGGSGTIYGWGHN---HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 2220
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 2221 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFVKKV-AVNSGGKHCL 2271
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P V+ L + + +V + G H+
Sbjct: 2272 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVVESL-RGIEVVDIAAGGAHS 2322
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ ++ AGD++SWG + L ++ D + P L+ G + D +ACG+
Sbjct: 2323 ACITVAGDLYSWGKGR------YGRLGHGDSEDQLKPKLV--EALQGYRVID---IACGS 2371
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 2372 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 2399
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 63/152 (41%), Gaps = 22/152 (14%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 2405 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 2461
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 2462 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 2513
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + V CGS HT + K N
Sbjct: 2514 VAALQGKK---INRVACGSAHTLAWSTSKPAN 2542
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 74/185 (40%), Gaps = 23/185 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L + + +W WG+ D G P + G VVKV CGS+
Sbjct: 2371 SGDAQTLCLTDDDTVWSWGDG---DYGKLGRGGSDGCKVPMKIDSLTGLGVVKVECGSQF 2427
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL +G Y+WG + +LG G + RP+ ++ V + G
Sbjct: 2428 SVALTKSG--------AVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKK---VIAIATG 2476
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S H T + +T+G + GQLG GTT + P V L Q + V C
Sbjct: 2477 SLHCVCCTE--------DGEVYTWGDNDEGQLGDGTTNAIQRPRLVAAL-QGKKINRVAC 2527
Query: 259 GLFHT 263
G HT
Sbjct: 2528 GSAHT 2532
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 80/205 (39%), Gaps = 28/205 (13%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
S +G +LA+ G +W WG+ D G TP + +VKV CG
Sbjct: 314 SCGSGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDIVKVRCG 370
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S+ +AL G+ Y SWG +N +LG G E PK++E V +V
Sbjct: 371 SQFSIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VVDV 419
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYL 253
GS H LT E W G N Q H T P Q LP ++
Sbjct: 420 AAGSTHCLALTEDS------EVHSW----GSNDQCQHFDTLRITKP-QPSALPGLDTKHI 468
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGME 278
V + CG + SS + WS G+
Sbjct: 469 VGIACGPAQSFAWSSCSE-WSIGLR 492
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + L ++V + CG +++ +++ G++++WG
Sbjct: 222 FSWGCGDGGRLGHGDTVPLEEPKMISALSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 281
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + V+CG+ A T+ VT++G
Sbjct: 282 RGN------YGRLGHGSSEDQTIPMLVTG-----LKGLKVIDVSCGSGDAQTLAVTENG- 329
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 330 QVWSWGDGDYGKLGRGGSDGCKTPKLI 356
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 93/220 (42%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 2174 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 2211
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 2212 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFVKKVAVNSGGKHC 2270
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V +A
Sbjct: 2271 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVVESLRGIEV-------------VDIAA 2317
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ +T G L+SWG+GR G LG G + D P +V
Sbjct: 2318 GGAHSACITVAG-DLYSWGKGRYGRLGHGDSEDQLKPKLV 2356
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 52/101 (51%), Gaps = 10/101 (9%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVA 320
H +++ G+V+SWG G L ++ E P +IS +G K V +A
Sbjct: 211 HYLALAATGEVFSWGCGDGGRLGHGDTVPLEE------PKMISALSGKQAGKHV--VHIA 262
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG+ ++ +T +G +L++WGRG G LG G + D P +V
Sbjct: 263 CGSTYSAAITAEG-ELYTWGRGNYGRLGHGSSEDQTIPMLV 302
>gi|440790434|gb|ELR11717.1| regulator of chromosome condensation (RCC1) repeat domain containing
protein [Acanthamoeba castellanii str. Neff]
Length = 1563
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 83/282 (29%), Positives = 125/282 (44%), Gaps = 47/282 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTE---GGFSLVSSFTPSPVWDFHGHTV 129
++ +V G A+ G ++ WG + S E G S V P V F V
Sbjct: 876 QVVNVSCGWNHCAALTENGHVYTWGR----NGSGELGHGDKSGVPQLHPKQVIFFKSKCV 931
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+V CG EH +A +G Y WG GQLGLGDR P I+T +
Sbjct: 932 KEVVCGGEHTLARTESGS--------VYGWGNGRIGQLGLGDRTLHWLPVPIKTLRK--- 980
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ G HT ++ + FG GE GQLG G + LVP +++ +P
Sbjct: 981 MHVTQLAAGYAHTIVV--------LKSGEVMVFGGGEVGQLGTGMRKDLLVPTKLQAMPS 1032
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+V CG HT++++ AG+V++ G M LG N D ++P ++ G
Sbjct: 1033 ---IVQAACGYCHTALLTEAGEVYTCGSAMSGQLGHADNLQ------NDRLAPKMVEGLN 1083
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+F +ACG+ HT+ +TD +++WG GV GT
Sbjct: 1084 GKRIRF-----IACGSFHTIAITDLD-NVYTWG----GVQGT 1115
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 103/239 (43%), Gaps = 32/239 (13%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD--RESRLRPKIIETFN 185
++V+ ACG H L AGE Y+ G+ +GQLG D + RL PK++E N
Sbjct: 1032 SIVQAACGYCHTALLTEAGE--------VYTCGSAMSGQLGHADNLQNDRLAPKMVEGLN 1083
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW--TFGLGENGQLGHGTTQSAL---V 240
+ + CGSFHT +T D+ W G +G + + L
Sbjct: 1084 GKR---IRFIACGSFHTIAIT------DLDNVYTWGGVQGTDSDGAMRQERKAAILKRVT 1134
Query: 241 PEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG--LCPNASLTRNEAGDA 297
P VK L + + LVS CG H+ + G+V+ W L L S +G
Sbjct: 1135 PSIVKGLMGKRISLVS--CGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTT 1192
Query: 298 ISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+P+L+S PV A G T++VT++G L+SWG G G LG G D
Sbjct: 1193 EAPLLVSAIPDGQDAKSKPVVKHAAAGEEFTLVVTENGL-LYSWGSGAFGQLGLGDQGD 1250
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 66/170 (38%), Gaps = 33/170 (19%)
Query: 204 LLTHRKRPNDM-LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+L HR++ N+ L LG + G + + L +V+V CG H
Sbjct: 827 MLNHRRKRNEAHLPPKVEKRNLGPESEQDDGVSSGGKLNVPFGGLVSMRQVVNVSCGWNH 886
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ---- 318
+ ++ G V++WG RN +G+ L G+ P+ P Q
Sbjct: 887 CAALTENGHVYTWG--------------RNGSGE-----LGHGDKSGVPQLH-PKQVIFF 926
Query: 319 -------VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V CG HT+ T+ G ++ WG GR G LG G + P +
Sbjct: 927 KSKCVKEVVCGGEHTLARTESG-SVYGWGNGRIGQLGLGDRTLHWLPVPI 975
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 48/114 (42%), Gaps = 18/114 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMW---GNCPLPDSSTEGGFSLVSSFTPSPVW------- 122
+I V G S+A G +++W G+ P G S S T +P+
Sbjct: 1145 RISLVSCGHAHSVATTMDGEVYVWSSTGSLQPPLLLRGSGLSTASGTTEAPLLVSAIPDG 1204
Query: 123 -DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
D VVK A E +V+ E+ + YSWG+ GQLGLGD+ R
Sbjct: 1205 QDAKSKPVVKHAAAGEEFTLVVT-------ENGLLYSWGSGAFGQLGLGDQGDR 1251
>gi|340375548|ref|XP_003386296.1| PREDICTED: e3 ubiquitin-protein ligase HERC2 [Amphimedon
queenslandica]
Length = 4694
Score = 95.1 bits (235), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 108/226 (47%), Gaps = 33/226 (14%)
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
H++AL G+ Y SWG +NG LG+G+ ES+ P + + D + ++
Sbjct: 519 HILALTKDGKVY--------SWGQGSNGVLGIGNTESQTAPTAVAALSGDR---IVHISA 567
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+A +T + + +T+G G G+LGHG + L+P V+ L V +V VD
Sbjct: 568 GSMHSAAVTE--------DGVLYTWGKGSYGRLGHGNAEDKLIPTIVEGL-NGVKIVQVD 618
Query: 258 CGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
CG HT + G VWSWG + G +N+ P ISG G P
Sbjct: 619 CGSGDAHTLALDDTGQVWSWG-DGDYGKLGRPGSDQNKV-----PKPISGIGSTSPV--- 669
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V++ CG ++ +T DG KL+SWG G + LG G P ++
Sbjct: 670 -VKIICGNQISMALTKDG-KLYSWGCGDTYQLGHGNQEHVRQPKLI 713
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 122/260 (46%), Gaps = 43/260 (16%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
GGF+ + P + + V KVA C HV+A+ + G+ + SWG G
Sbjct: 2993 GGFANIR--MPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVF--------SWGDGQYG 3042
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
QLG G +S RPK+IE F + EV+CG+ H+A ++ + +T+G G
Sbjct: 3043 QLGHGSLQSYDRPKMIEIFQAKH---IREVSCGTGHSAAVS--------VNGELFTWGQG 3091
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD--VWSWGMEK--GL 281
+G+LGHG + + P+ V+ L + V + V CG + + +AGD +W+WG L
Sbjct: 3092 ADGRLGHGDSNNQTKPKLVRAL-EKVRISCVACGSRNAHTL-AAGDNSLWAWGDGSFGKL 3149
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
GL +S T P I +Q+ CG +VL+T +G K+++WG+
Sbjct: 3150 GLKDGSSSTDVPVQVITFPSNI-------------IQIECGMHFSVLLTKEG-KVYTWGK 3195
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G LG T P +V
Sbjct: 3196 GEYYRLGNDSTSVQPIPTLV 3215
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 115/259 (44%), Gaps = 38/259 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + AG M S A+ G L+ WG G + P+ V +G +V+V
Sbjct: 561 RIVHISAGSMHSAAVTEDGVLYTWGKGSY---GRLGHGNAEDKLIPTIVEGLNGVKIVQV 617
Query: 133 ACGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
CGS H +AL G+ +SWG + G+LG + PK I SP
Sbjct: 618 DCGSGDAHTLALDDTGQV--------WSWGDGDYGKLGRPGSDQNKVPKPISGIGSTSP- 668
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++ CG+ + LT + +++G G+ QLGHG + P+ ++ L +
Sbjct: 669 -VVKIICGNQISMALTK--------DGKLYSWGCGDTYQLGHGNQEHVRQPKLIEGLSET 719
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI-SPILISGNGPH 309
V + V G H +++ DV++WG N+S NE+GD I SP++I
Sbjct: 720 V-VSDVSVGAQHCVALTTDSDVYAWG--------KNSSFEVNESGDIISSPLMIEAASGK 770
Query: 310 GPKFQDPVQVACGAAHTVL 328
G + +ACGA+ T +
Sbjct: 771 G-----ALLIACGASETFV 784
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 125/288 (43%), Gaps = 34/288 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K ++ +GG LA+ G L+ WG + G + V+ P + V+
Sbjct: 3923 VKKIAIHSGGKHCLAVTTQGELYAWGEG---EDGKLGLGTTVNMNVPHLIESLKSKHVID 3979
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS H + G Y+WG G+LG D E++ +PK++ +
Sbjct: 3980 AGCGSSHSACITDDGS--------LYTWGKGRYGRLGHNDHETQHKPKLVSALKGEQ--- 4028
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V CGS L S C +++G G+ G+LG G + + VP+++ L
Sbjct: 4029 VTCVACGSGDAQTLC-------ATASGCVFSWGDGDYGKLGRGGNEGSKVPKKIDSLTGK 4081
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+++ + CG + +++AG V++WG KG L + +P + G H
Sbjct: 4082 -HVIKLLCGSQFSMALTTAGHVYTWG--KG----DYYRLGHGDDSHQRTPRRVLGLLAH- 4133
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
++ + + CG+ H ++ T+ G K++SWG G +G T P
Sbjct: 4134 ---ENVIDIGCGSLHCIVCTESG-KVFSWGDNDEGQIGNDTTQAVSVP 4177
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 87/430 (20%), Positives = 156/430 (36%), Gaps = 121/430 (28%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ +V G LA+ G ++ WG+ G SL S P + F + +
Sbjct: 3012 VRKVAVSCAGRHVLAVTADGKVFSWGDGQY---GQLGHGSLQSYDRPKMIEIFQAKHIRE 3068
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ----- 186
V+CG+ H A+ GE ++WG +G+LG GD ++ +PK++ +
Sbjct: 3069 VSCGTGHSAAVSVNGE--------LFTWGQGADGRLGHGDSNNQTKPKLVRALEKVRISC 3120
Query: 187 ---------------DSPWA------------------------------VYEVTCGSFH 201
+S WA + ++ CG
Sbjct: 3121 VACGSRNAHTLAAGDNSLWAWGDGSFGKLGLKDGSSSTDVPVQVITFPSNIIQIECGMHF 3180
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
+ LLT E +T+G GE +LG+ +T +P V L + V G
Sbjct: 3181 SVLLTK--------EGKVYTWGKGEYYRLGNDSTSVQPIPTLVDGLASKT-ITQVAVGAL 3231
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H ++S+G+V+SWG + G N S N ++ + K ++AC
Sbjct: 3232 HCLALTSSGEVYSWG-DNEHGQQGNNSTICNRKPQIVASL----------KGHRICKIAC 3280
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGL- 380
G++H++ G L T V + P++ +D L +
Sbjct: 3281 GSSHSIAFA-------------QGSLTTA----------VKFSPISFSNSKDPLGASIVH 3317
Query: 381 ----DDEIKTKD------------LEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILH 424
DD +TKD L+ +R E L + +++ ++ +++ + I+H
Sbjct: 3318 GKSSDDAKETKDKERPSLTQIIISLKQHSKRQEALGHVLTALQIAYARDTIVNALSGIVH 3377
Query: 425 GSIFGKPFAA 434
S K A
Sbjct: 3378 ASAHEKKQGA 3387
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 34/205 (16%)
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
G + WG N+ GQLG + P++ E+ ++ +P +T G +T
Sbjct: 3831 GSTFSVFGWGHNHRGQLGGIEGNKVKSPRLCESLSELNPAM---ITGGEQTLFAVTD--- 3884
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY---VYLVSVDCGLFHTSVVS 267
+ + G +G+LG G++ + P + L V +++ G H V+
Sbjct: 3885 -----DGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRGIAVKKIAIHSGGKHCLAVT 3939
Query: 268 SAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ G++++WG + GLG N ++ P LI K + + CG+
Sbjct: 3940 TQGELYAWGEGEDGKLGLGTTVNMNV----------PHLI-----ESLKSKHVIDAGCGS 3984
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLG 348
+H+ +TDDG L++WG+GR G LG
Sbjct: 3985 SHSACITDDG-SLYTWGKGRYGRLG 4008
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 93/207 (44%), Gaps = 25/207 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKI-IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
+ WG N+ QLG E++++ I T + P + GS + +++
Sbjct: 2927 FVWGLNDMRQLGTDLSEAKVKSPIESRTLARLHP---IQFAGGSKCSFVVSD-------- 2975
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWS 274
+ + G G +G+LG G + +P Q+ L YV V+V C H V++ G V+S
Sbjct: 2976 DGKVFACGEGSSGRLGIGGFANIRMPHQISSLSMYVVRKVAVSCAGRHVLAVTADGKVFS 3035
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + G + SL + I + + +V+CG H+ V+ +G
Sbjct: 3036 WG-DGQYGQLGHGSLQSYDRPKMIEIF----------QAKHIREVSCGTGHSAAVSVNG- 3083
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WG+G G LG G + + P +V
Sbjct: 3084 ELFTWGQGADGRLGHGDSNNQTKPKLV 3110
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 29/222 (13%)
Query: 136 SEHVVALVSAGETY---KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
SE A+++ GE +D Y+ G +G+LG+G ++ P + + AV
Sbjct: 3865 SELNPAMITGGEQTLFAVTDDGKVYASGYAAHGRLGIGSSDNVATPTPLTSLATRG-IAV 3923
Query: 193 YEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
++ G H +T + + +G GE+G+LG GTT + VP ++ L +
Sbjct: 3924 KKIAIHSGGKHCLAVT--------TQGELYAWGEGEDGKLGLGTTVNMNVPHLIESL-KS 3974
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+++ CG H++ ++ G +++WG + L N T+++ P L+S
Sbjct: 3975 KHVIDAGCGSSHSACITDDGSLYTWGKGRYGRLGHNDHETQHK------PKLVS-----A 4023
Query: 311 PKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
K + VACG+ A T+ T G ++SWG G G LG G
Sbjct: 4024 LKGEQVTCVACGSGDAQTLCATASGC-VFSWGDGDYGKLGRG 4064
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P I ++ G S+ + G ++ WG + G S P+ V T+
Sbjct: 3168 PSNIIQIECGMHFSVLLTKEGKVYTWGKG---EYYRLGNDSTSVQPIPTLVDGLASKTIT 3224
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VA G+ H +AL S+GE YSWG N +GQ G +P+I+ +
Sbjct: 3225 QVAVGALHCLALTSSGEV--------YSWGDNEHGQQGNNSTICNRKPQIVASLKGHR-- 3274
Query: 191 AVYEVTCGSFHT 202
+ ++ CGS H+
Sbjct: 3275 -ICKIACGSSHS 3285
>gi|302855419|ref|XP_002959204.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
gi|300255434|gb|EFJ39741.1| hypothetical protein VOLCADRAFT_70529 [Volvox carteri f.
nagariensis]
Length = 367
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 117/284 (41%), Gaps = 67/284 (23%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F P P+ F G V +VACG H + + GE + ++G N NGQLGLG
Sbjct: 107 FVPRPIEFFSGRPVHRVACGDTHTLVVAGEGELF--------TFGRNQNGQLGLGHTNDC 158
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTH----------------------RKRPND 213
L P+++ + V V CGS H+ T R P
Sbjct: 159 LSPQLVVALQGER---VRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQDRYLPTR 215
Query: 214 --------MLESMC--------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
M+ + C +TFG + GQLGHG VP QV L ++
Sbjct: 216 VVGLEGIRMVSAECGWRHSAVVSEDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAAL-RHT 274
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ SV G HT S+G+++ WG K L ++ D SP+L+ G
Sbjct: 275 RISSVAGGWRHTMAADSSGNLYGWGWNK------FGQLGLGDSSDRPSPVLVGG----AL 324
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
Q V CG HTV VT+ G +++SWGRG +G LG G D
Sbjct: 325 AGQRVSLVTCGWRHTVAVTEGG-RVYSWGRGVNGQLGHGAEQDL 367
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 31/234 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V+CGS H VA++S G + SWG +GQLG G + L PK I T
Sbjct: 15 VTAVSCGSSHSVAILSCG--------IVTSWGRGEDGQLGHGQADECLAPKAISTLTDA- 65
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG+ +T + + +++G G+ G+LGHG VP + E
Sbjct: 66 --GIESVVCGAEYTIAVAPSR-------GQVYSWGWGDFGRLGHGDCNDVFVPRPI-EFF 115
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ V CG HT VV+ G+++++G + N L D +SP L+
Sbjct: 116 SGRPVHRVACGDTHTLVVAGEGELFTFGRNQ------NGQLGLGHTNDCLSPQLVV--AL 167
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + VACG+ H++ T+ G ++SWG GR G LG G++ D + P V+
Sbjct: 168 QGERVRS---VACGSEHSLAATESG-TVFSWGWGRYGNLGDGESQDRYLPTRVV 217
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 81/209 (38%), Gaps = 32/209 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGAL--WMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
++ SV G SLA +G + W WG L D ++ + P+ V G +
Sbjct: 171 RVRSVACGSEHSLAATESGTVFSWGWGRYGNLGDGESQ------DRYLPTRVVGLEGIRM 224
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V CG H A+VS ED +++G + GQLG GD R P +
Sbjct: 225 VSAECGWRHS-AVVS-------EDGRVFTFGWSKYGQLGHGDHTDRTVPCQVAALRHTR- 275
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKEL 247
+ V G HT +S +G G N GQLG G + P V
Sbjct: 276 --ISSVAGGWRHTM----------AADSSGNLYGWGWNKFGQLGLGDSSDRPSPVLVGGA 323
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ V CG HT V+ G V+SWG
Sbjct: 324 LAGQRVSLVTCGWRHTVAVTEGGRVYSWG 352
>gi|440904418|gb|ELR54938.1| E3 ISG15--protein ligase HERC5, partial [Bos grunniens mutus]
Length = 1009
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 97/204 (47%), Gaps = 23/204 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG D G S+ TP V + G +V+++
Sbjct: 124 IIQITCGDYHSLALSKGGELFAWGQN--LDGQLGVGRIFASTSTPEIVENLSGVPLVQIS 181
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G YSWG N+ GQLGLG ++ P IET + V
Sbjct: 182 AGEAHSMALSMSGNV--------YSWGRNDCGQLGLGHTYNKDSPSCIETLDDQK---VE 230
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + +TFG G+ GQLGH +TQ+ L P V L +
Sbjct: 231 FLACGGCHTALLTK--------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-RV 281
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWG 276
+ CG HT + VS G V+S+G
Sbjct: 282 TQIACGRQHTLAYVSDTGKVFSFG 305
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 34/233 (14%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQ 186
++++ CG H +AL GE ++WG N +GQLG+G S P+I+E
Sbjct: 123 NIIQITCGDYHSLALSKGGE--------LFAWGQNLDGQLGVGRIFASTSTPEIVENL-- 172
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T + P ++
Sbjct: 173 -SGVPLVQISAGEAHSMALS--------MSGNVYSWGRNDCGQLGLGHTYNKDSPSCIET 223
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Q V ++ CG HT++++ +G V+++G K L N + + P L++G
Sbjct: 224 LDDQKVEFLA--CGGCHTALLTKSGLVFTFGDGK------YGQLGHNSTQNELRPRLVTG 275
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ Q+ACG HT+ D K++S+G G+ G LG G T + P
Sbjct: 276 LVGN-----RVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 323
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 19/113 (16%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
++ + CG +H+ +S G++++WG + G+G AS + E + +S + +
Sbjct: 124 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL----- 177
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VQ++ G AH++ ++ G ++SWGR G LG G T + +P+ +
Sbjct: 178 --------VQISAGEAHSMALSMSG-NVYSWGRNDCGQLGLGHTYNKDSPSCI 221
>gi|67623229|ref|XP_667897.1| uvb-resistance protein uvr8 [Cryptosporidium hominis TU502]
gi|54659070|gb|EAL37667.1| uvb-resistance protein uvr8 [Cryptosporidium hominis]
Length = 487
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 130/291 (44%), Gaps = 41/291 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G S AI N+G L +WG + GF + P + VV+VA
Sbjct: 44 ISKVSCGSNYSAAITNSGDLILWGY----GGCGQLGFGNLEDCL-VPRVNLSLKNVVQVA 98
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW--- 190
C H A++S GE Y+WG + NG+LG G E + ++ +
Sbjct: 99 CSDRHTAAILSNGE--------LYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGE 150
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V+CGS+HT LT K+ T+GLG G+LGHG TQ P+ ++ L
Sbjct: 151 KVIQVSCGSYHTGCLTDDKK--------ALTWGLGLQGRLGHGDTQDIFTPKLIESLAG- 201
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ + + CG HT+++ G ++ +G L D + P L+ G
Sbjct: 202 LPIKEISCGGHHTAILLVTGKLYMFGG------GAFGKLGFGSTDDVLIPRLLEG----- 250
Query: 311 PKFQD--PVQVACGAAHTVLVTDDGYKLWSWGR-GRSGVLGTGKTIDFFAP 358
+D +V+ G+ H+ VT G K+++WG+ GR G + G DF +P
Sbjct: 251 -PLEDIQITKVSLGSQHSAAVTKCG-KVYTWGQGGRLGHIFNGPEHDFLSP 299
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 35/259 (13%)
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHTVVKVACGSEHVVA 141
AI + G L+ WG C G F L S P V G V++V+CGS H
Sbjct: 106 AILSNGELYTWG-CSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGC 164
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
L +D +WG G+LG GD + PK+IE+ + + E++CG H
Sbjct: 165 LT--------DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESL---AGLPIKEISCGGHH 213
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
TA+L ++ + FG G G+LG G+T L+P ++ + + + V G
Sbjct: 214 TAIL--------LVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQ 265
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H++ V+ G V++WG LG N D +SP +S + V ++C
Sbjct: 266 HSAAVTKCGKVYTWGQGGRLGHIFNGP-----EHDFLSPKRLS-----NLEKAFIVDISC 315
Query: 322 GAAHTVLVTDDGYKLWSWG 340
G +H+V ++D G +++WG
Sbjct: 316 GNSHSVALSDVG-DIYTWG 333
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 40/246 (16%)
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
H ++ KV+CGS + A+ ++G DL+ WG GQLG G+ E L P++ +
Sbjct: 40 HLSSISKVSCGSNYSAAITNSG------DLIL--WGYGGCGQLGFGNLEDCLVPRVNLSL 91
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV---- 240
V +V C HTA + + +T+G +NG+LGHG + ++
Sbjct: 92 KN-----VVQVACSDRHTAAI--------LSNGELYTWGCSKNGKLGHGQFELSISNNVV 138
Query: 241 --PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
P +VK L + ++ V CG +HT ++ +WG LGL L + D
Sbjct: 139 SQPMKVKAL-EGEKVIQVSCGSYHTGCLTDDKKALTWG----LGL--QGRLGHGDTQDIF 191
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+P LI K +++CG HT ++ G KL+ +G G G LG G T D P
Sbjct: 192 TPKLIESLAGLPIK-----EISCGGHHTAILLVTG-KLYMFGGGAFGKLGFGSTDDVLIP 245
Query: 359 AIVLWP 364
++ P
Sbjct: 246 RLLEGP 251
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 100/206 (48%), Gaps = 25/206 (12%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG++ GQ G E P +++ S ++ +V+CGS ++A +T+ D++
Sbjct: 13 WGSSEYGQHGSKGEEVSPGPHLVDGLRHLS--SISKVSCGSNYSAAITN---SGDLI--- 64
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+G G GQLG G + LVP L +V V C HT+ + S G++++WG
Sbjct: 65 --LWGYGGCGQLGFGNLEDCLVPRVNLSLKN---VVQVACSDRHTAAILSNGELYTWGCS 119
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTDDGYK 335
K N L + +IS ++S P K + +QV+CG+ HT +TDD K
Sbjct: 120 K------NGKLGHGQFELSISNNVVSQ--PMKVKALEGEKVIQVSCGSYHTGCLTDD-KK 170
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+WG G G LG G T D F P ++
Sbjct: 171 ALTWGLGLQGRLGHGDTQDIFTPKLI 196
>gi|15218867|ref|NP_176767.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|6227017|gb|AAF06053.1|AC009513_9 Contains PF|00169 Pleckstrin homology domain, 6 PF|00415 Regulator
of chromosome condensation (RCC1) domains and a PF|01363
FYVE Zinc finger domain [Arabidopsis thaliana]
gi|332196320|gb|AEE34441.1| Regulator of chromosome condensation (RCC1) family with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1006
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 146/314 (46%), Gaps = 53/314 (16%)
Query: 58 DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSS 115
+SLED + + SV + A+ +G L++WG +GG S
Sbjct: 339 ESLED---------VAVRSVACSDHQTCAVTESGELYLWG--------IDGGTIEQSGSQ 381
Query: 116 FTPSPVWDFHGH--TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
F + D G TV+ VACG+ H + S+G+ + ++G+ G LG G E
Sbjct: 382 FLTRKISDVLGGSLTVLSVACGAWHTAIVTSSGQLF--------TYGSGTFGVLGHGSLE 433
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH----RKRPNDMLESMCWTFGLGENGQ 229
S +PK +E+ + V V+CG +HTA + RK N +T+G G+ G+
Sbjct: 434 SVTKPKEVESLRR---MKVISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGR 490
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNA 287
LGH ++ LVP V EL + + + V CG T +S +G V++ G + LG CP A
Sbjct: 491 LGHADSKRKLVPTCVTELIDHDF-IKVSCGWTLTVALSISGTVYTMGSSIHGQLG-CPRA 548
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
+++ +L GN Q +A G+ H ++T G +++WG+G +G L
Sbjct: 549 K------DKSVNVVL--GNLTR----QFVKDIASGSHHVAVLTSFG-NVYTWGKGMNGQL 595
Query: 348 GTGKTIDFFAPAIV 361
G G D +P +V
Sbjct: 596 GLGDVRDRNSPVLV 609
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 99/247 (40%), Gaps = 49/247 (19%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++ G++H + GE + WG N+G+LGL PK +E+
Sbjct: 294 VQSISLGAKHAALVTRQGEVF--------CWGNGNSGKLGLKVNIDIDHPKRVESLED-- 343
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-L 247
AV V C T +T E W G Q G S + ++ + L
Sbjct: 344 -VAVRSVACSDHQTCAVTESG------ELYLWGIDGGTIEQSG-----SQFLTRKISDVL 391
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISG 305
+ ++SV CG +HT++V+S+G ++++G LG S+T+ + +++ + +
Sbjct: 392 GGSLTVLSVACGAWHTAIVTSSGQLFTYGSGTFGVLGHGSLESVTKPKEVESLRRMKV-- 449
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGY-----------KLWSWGRGRSGVLGTGKTID 354
+ V+CG HT + + KL++WG G G LG +
Sbjct: 450 -----------ISVSCGPWHTAAIVETANDRKFYNAKSCGKLFTWGDGDKGRLGHADSKR 498
Query: 355 FFAPAIV 361
P V
Sbjct: 499 KLVPTCV 505
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 75/176 (42%), Gaps = 23/176 (13%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG+ D G P+ V + H +KV+CG VAL +G
Sbjct: 478 GKLFTWGD---GDKGRLGHADSKRKLVPTCVTELIDHDFIKVSCGWTLTVALSISG---- 530
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
Y+ G++ +GQLG + + ++ + V ++ GS H A+LT
Sbjct: 531 ----TVYTMGSSIHGQLGCPRAKDKSVNVVLGNLTRQ---FVKDIASGSHHVAVLTSF-- 581
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+T+G G NGQLG G + P V+ L + + S+ CGL T+ +
Sbjct: 582 ------GNVYTWGKGMNGQLGLGDVRDRNSPVLVEPLGDRL-VESIACGLNLTAAI 630
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A GS HV L S G Y +WG NGQLGLGD R P ++E
Sbjct: 565 VKDIASGSHHVAVLTSFGNVY--------TWGKGMNGQLGLGDVRDRNSPVLVEPLGDR- 615
Query: 189 PWAVYEVTCG-SFHTALLTHRK 209
V + CG + A+ H++
Sbjct: 616 --LVESIACGLNLTAAICLHKE 635
Score = 38.9 bits (89), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
D+ WG GL + S +N DA+SP L+ D ++ GA H LVT
Sbjct: 260 DIMIWGAITGL---IDGSKNQN---DALSPKLL-----ESATMFDVQSISLGAKHAALVT 308
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +++ WG G SG LG ID P V
Sbjct: 309 RQG-EVFCWGNGNSGKLGLKVNIDIDHPKRV 338
>gi|379721973|ref|YP_005314104.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
gi|378570645|gb|AFC30955.1| hypothetical protein PM3016_4177 [Paenibacillus mucilaginosus 3016]
Length = 337
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 136/311 (43%), Gaps = 54/311 (17%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D +KT+ +PI + + AGG S A+ + G W WG+ L D +T
Sbjct: 11 LGDGTKTDRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTT---- 66
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V H +VV + GS H +A+ + G ++WG N GQLG G
Sbjct: 67 --YDRLTPVQVQGLH--SVVALEAGSSHSLAVKADGS--------VWAWGWNTYGQLGDG 114
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+SR P ++ + +V V GS H+ + + W +G +GQL
Sbjct: 115 TTDSRSTPVQVQALD-----SVVAVAAGSGHSLAV--------KADGSVWAWGANWSGQL 161
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT + VP QV L +VSV G +S + S G VW+WG L +
Sbjct: 162 GDGTYTESTVPVQVTGLGS---VVSVSAGNTFSSALKSDGTVWAWGANDSGQLG-----S 213
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A ++ SP+ ++G ++ G+ +++ + +DG +W+WG SG LG G
Sbjct: 214 ETAASNSPSPVQVTG-------MASAAAISSGSDYSLALKNDG-TVWAWGYNSSGQLGNG 265
Query: 351 KTIDFFAPAIV 361
T AP V
Sbjct: 266 TTTSSSAPVQV 276
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 90/223 (40%), Gaps = 34/223 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + P+++ +V AG SLA+ G++W WG S G +
Sbjct: 111 LGDGTTDSRSTPVQVQALDSVVAVAAGSGHSLAVKADGSVWAWGANW---SGQLGDGTYT 167
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V +VV V+ G+ AL S D ++WGAN++GQLG
Sbjct: 168 ESTVPVQVTGLG--SVVSVSAGNTFSSALKS--------DGTVWAWGANDSGQLG----- 212
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
ET +SP V S + W +G +GQLG+G
Sbjct: 213 -------SETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNG 265
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
TT S+ P QV L +VSV G H V S G VW WG
Sbjct: 266 TTTSSSAPVQVTRLGS---VVSVAAGPLHGLAVQSGGTVWDWG 305
>gi|333978308|ref|YP_004516253.1| Ig domain-containing protein [Desulfotomaculum kuznetsovii DSM
6115]
gi|333821789|gb|AEG14452.1| Ig domain protein group 2 domain protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 1401
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 127/291 (43%), Gaps = 49/291 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ +V+AG SLA+ + G +W WG+ L D +T + +TP V + G VV
Sbjct: 69 VVAVEAGSFYSLALKSDGTVWAWGDNYYGQLGDGTTT------NRYTPVQVQNLTG--VV 120
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A G H +AL S D ++WG N GQLG G +R P ++
Sbjct: 121 AIAAGGGHSLALKS--------DGTVWAWGYNGYGQLGDGTITNRTTPVQVKNLTGVV-- 170
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V G H+ L + W +G GQLG GTT + P QV+ L
Sbjct: 171 ---AVAAGGGHSLALKS--------DGTVWAWGYNGYGQLGDGTTMNRYTPVQVQNL--- 216
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V++ G H+ + S G VW+WG G G + + T +P+ + G
Sbjct: 217 TGVVAIAAGSSHSLALKSDGTVWAWG-NNGYGQLGDGTTTNRT-----TPVRVQG----- 265
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D V +A G H++ + DG +W+WG SG LG G T + + P V
Sbjct: 266 --LTDVVAIAAGNEHSLALKSDG-TVWTWGWNYSGQLGDGTTTNRYTPVQV 313
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/322 (26%), Positives = 128/322 (39%), Gaps = 49/322 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + TN P+++ ++ AGG SLA+ + G +W WG G ++
Sbjct: 99 LGDGTTTNRYTPVQVQNLTGVVAIAAGGGHSLALKSDGTVWAWGYN---GYGQLGDGTIT 155
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ TP V + G V H +AL S D ++WG N GQLG G
Sbjct: 156 NRTTPVQVKNLTGVVAVAAGG--GHSLALKS--------DGTVWAWGYNGYGQLGDGTTM 205
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P ++ V + GS H+ L + W +G GQLG G
Sbjct: 206 NRYTPVQVQNLT-----GVVAIAAGSSHSLALKS--------DGTVWAWGNNGYGQLGDG 252
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT + P +V+ L +V++ G H+ + S G VW+WG L + R
Sbjct: 253 TTTNRTTPVRVQGLTD---VVAIAAGNEHSLALKSDGTVWTWGWNYSGQLGDGTTTNR-- 307
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+P+ + V +A G H++ + DG +W+WG G LG G
Sbjct: 308 ----YTPVQVQ-------NLTGVVAIAAGGGHSLALKSDG-TVWAWGNNDWGELGDGTRT 355
Query: 354 DFFAPAIVLWPPLTEEFKQDEL 375
D P V L ++ D L
Sbjct: 356 DRHTPVQVSGLNLGQQTTPDTL 377
>gi|386724712|ref|YP_006191038.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
gi|384091837|gb|AFH63273.1| hypothetical protein B2K_21665 [Paenibacillus mucilaginosus K02]
Length = 338
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 136/311 (43%), Gaps = 54/311 (17%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D +KT+ +PI + + AGG S A+ + G W WG+ L D +T
Sbjct: 12 LGDGTKTDRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTT---- 67
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V H +VV + GS H +A+ + G ++WG N GQLG G
Sbjct: 68 --YDRLTPVQVQGLH--SVVALEAGSSHSLAVKADGS--------VWAWGWNTYGQLGDG 115
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+SR P +E + +V V GS H+ + + W +G +GQL
Sbjct: 116 TTDSRSTPVQVEGLD-----SVVAVAAGSGHSLAV--------KADGSVWAWGANWSGQL 162
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT + VP QV L +VSV G +S + S G VW+WG L +
Sbjct: 163 GDGTYTESTVPVQVTGLGS---VVSVSAGNTFSSALKSDGTVWAWGANDSGQLG-----S 214
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A ++ SP+ ++G ++ G+ +++ + +DG +W+WG SG LG G
Sbjct: 215 ETAASNSPSPVQVTG-------MASAAAISSGSDYSLALKNDG-TVWAWGYNSSGQLGNG 266
Query: 351 KTIDFFAPAIV 361
T AP V
Sbjct: 267 TTTSSSAPVQV 277
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 92/205 (44%), Gaps = 30/205 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WGAN+N QLG G + R P I N DS V ++ G A R +
Sbjct: 2 WAWGANSNAQLGDGTKTDRYSP--IPVKNLDS---VIGISAGG--AASFAVRS------D 48
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W +G GQLG GTT L P QV+ L +V+++ G H+ V + G VW+WG
Sbjct: 49 GTAWAWGSNLFGQLGDGTTYDRLTPVQVQGLHS---VVALEAGSSHSLAVKADGSVWAWG 105
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + +R+ +P+ + G V VA G+ H++ V DG +
Sbjct: 106 WNTYGQLGDGTTDSRS------TPVQVEG-------LDSVVAVAAGSGHSLAVKADG-SV 151
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
W+WG SG LG G + P V
Sbjct: 152 WAWGANWSGQLGDGTYTESTVPVQV 176
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 90/223 (40%), Gaps = 34/223 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + P+++ +V AG SLA+ G++W WG S G +
Sbjct: 112 LGDGTTDSRSTPVQVEGLDSVVAVAAGSGHSLAVKADGSVWAWGANW---SGQLGDGTYT 168
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V +VV V+ G+ AL S D ++WGAN++GQLG
Sbjct: 169 ESTVPVQVTGLG--SVVSVSAGNTFSSALKS--------DGTVWAWGANDSGQLG----- 213
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
ET +SP V S + W +G +GQLG+G
Sbjct: 214 -------SETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNG 266
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
TT S+ P QV L +VSV G H V S G VW WG
Sbjct: 267 TTTSSSAPVQVTRLGS---VVSVAAGPLHGLAVQSGGTVWDWG 306
>gi|405355587|ref|ZP_11024762.1| hypothetical protein A176_0896 [Chondromyces apiculatus DSM 436]
gi|397091294|gb|EJJ22112.1| hypothetical protein A176_0896 [Myxococcus sp. (contaminant ex DSM
436)]
Length = 1473
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/336 (27%), Positives = 135/336 (40%), Gaps = 51/336 (15%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
+L DG + G+NS + F +P+ + S I SV AG ++
Sbjct: 229 TLAVHADGAVSSWGANSFGQLGLGTFTQRLSPERIPTLSG--------ITSVAAGTYHAV 280
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSA 145
A+ G +W WG+ S G + P+P+ G VA + A
Sbjct: 281 ALGKDGTVWTWGSN---SSGQLGDGTWNDRAVPAPL----------PGVGGARAVASLDA 327
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
G E +WGANN+GQLG GD R P ++ + AV V G+ H L
Sbjct: 328 GSLALLEGGDVLAWGANNSGQLGDGDTADRSTPSLVPELS-----AVTAVVGGAQHA--L 380
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
RK + W +G G GQLGHG ++ +VP V L + S+ G FH+
Sbjct: 381 ALRK------DGTLWAWGGGLAGQLGHGGSERHVVPATVMGLTN---VTSMATGSFHSLA 431
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G VW+WG G + ++T P+ + P VA H
Sbjct: 432 ALEDGSVWAWGRNS-YGQLGDGTVTERHV-----PVRV-------PGLPSVRAVAAAGHH 478
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V DG +W+WGR +G LG G T D P V
Sbjct: 479 SIAVAMDG-TVWTWGRNAAGQLGDGTTRDRARPVAV 513
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/312 (28%), Positives = 129/312 (41%), Gaps = 55/312 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D + T+ P ++ +V AG SL + + G +W WG + L T+ G
Sbjct: 149 LGDGTTTDRAEPQRVEGFTDVVAVAAGDFHSLVLKSDGTVWAWGTNFHGQLGQGHTQTGL 208
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
P PV G VV +A G + +A+ + D SWGAN+ GQLGLG
Sbjct: 209 ------WPKPVPGLEG--VVALAAGFDFTLAVHA--------DGAVSSWGANSFGQLGLG 252
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
RL P+ I T + + V G++H L + WT+G +GQL
Sbjct: 253 TFTQRLSPERIPTLS-----GITSVAAGTYHAVALGK--------DGTVWTWGSNSSGQL 299
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT VP + + + S+D G + GDV +WG + L
Sbjct: 300 GDGTWNDRAVPAPLPGVGGARAVASLDAGSL---ALLEGGDVLAWGANN------SGQLG 350
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ D +P L+ P+ V GA H + + DG LW+WG G +G LG G
Sbjct: 351 DGDTADRSTPSLV-------PELSAVTAVVGGAQHALALRKDG-TLWAWGGGLAGQLGHG 402
Query: 351 KTIDFFAPAIVL 362
+ PA V+
Sbjct: 403 GSERHVVPATVM 414
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 87/289 (30%), Positives = 121/289 (41%), Gaps = 42/289 (14%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P+ + AG SL + GA+W WG +S+ + G + S SP +V
Sbjct: 65 PLSPMRIAAGAQHSLFLTPTGAVWAWGG----NSAGQLGGADTSFQRLSPARLPVLEDIV 120
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V G H +AL G D ++WG+N++GQLG G R P+ +E F
Sbjct: 121 SVVSGDAHSLAL--------GADGTVWTWGSNSSGQLGDGTTTDRAEPQRVEGFTD---- 168
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V G FH+ +L + W +G +GQLG G TQ+ L P K +P
Sbjct: 169 -VVAVAAGDFHSLVLKS--------DGTVWAWGTNFHGQLGQGHTQTGLWP---KPVPGL 216
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V++ G T V + G V SWG G + T+ +SP I
Sbjct: 217 EGVVALAAGFDFTLAVHADGAVSSWGANS-FGQLGLGTFTQR-----LSPERI------- 263
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P VA G H V + DG +W+WG SG LG G D PA
Sbjct: 264 PTLSGITSVAAGTYHAVALGKDG-TVWTWGSNSSGQLGDGTWNDRAVPA 311
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 125/310 (40%), Gaps = 52/310 (16%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + AP + I +V GG SLA+ + G +W WG S G ++
Sbjct: 849 LGDGTTSARVAPGRVEGLEGIVAVAGGGDTSLALRSDGTVWAWGANA---SGQVGDGTVE 905
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP + V+ +A G H +A+ GED ++WGAN +GQLG G
Sbjct: 906 DRLTPRRIEAL--SDVMVIALGESHALAV--------GEDGTVWAWGANASGQLGDGGET 955
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P ++ V V G +F A+ + W +G E+GQLG
Sbjct: 956 PSLLPARVKGLE-----GVGSVAAGRAFSLAVRD---------DGTAWAWGANESGQLGD 1001
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+ QS VP +V + L +V G H + G VW+WG T
Sbjct: 1002 GSNQSRRVPHRVASVKG---LRAVSAGAHHAMALGEDGAVWAWGDN-----------TLG 1047
Query: 293 EAGDAISPILISGNGPHG-PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ GD S + P + D VA G +V V DG SWG G LG GK
Sbjct: 1048 QLGDGTSAFTVM--WPQRVAELSDVESVAAGEQFSVAVAHDGTAF-SWGSNEYGQLGDGK 1104
Query: 352 TIDFFAPAIV 361
T +PA V
Sbjct: 1105 TGPRLSPAEV 1114
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 125/308 (40%), Gaps = 44/308 (14%)
Query: 60 LEDDSKTNHKAPIKICSVK------AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S + + P ++ SVK AG ++A+ GA+W WG+ L G S
Sbjct: 999 LGDGSNQSRRVPHRVASVKGLRAVSAGAHHAMALGEDGAVWAWGDNTLGQLGD--GTSAF 1056
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ P V + V VA G + VA+ D +SWG+N GQLG G
Sbjct: 1057 TVMWPQRVAELS--DVESVAAGEQFSVAVA--------HDGTAFSWGSNEYGQLGDGKTG 1106
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P ++ + V G AL M + +G GQLG G
Sbjct: 1107 PRLSPAEVKIGGSKARTVVTVGAWGQHAVAL---------MADGTLQAWGDNATGQLGDG 1157
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT P +++ + + + +V G +H+ + G VW+WG G G + + T
Sbjct: 1158 TTTRRSSPGEIRGVTR---VTAVSTGAWHSLALRLDGTVWAWG-ANGFGQLGDGTTTARA 1213
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
P+ + G +D V +A G H+V V DG +W+WG G LG G +
Sbjct: 1214 V-----PVPVQG-------LRDVVAIAAGGYHSVAVRSDG-TVWTWGYNTFGQLGDGTSE 1260
Query: 354 DFFAPAIV 361
P V
Sbjct: 1261 SRALPVQV 1268
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 113/289 (39%), Gaps = 43/289 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ S+ G SLA G++W WG G ++ P V +V V
Sbjct: 418 NVTSMATGSFHSLAALEDGSVWAWGRNSY---GQLGDGTVTERHVPVRVPGLP--SVRAV 472
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A H +A+ D ++WG N GQLG G R RP + +V
Sbjct: 473 AAAGHHSIAVA--------MDGTVWTWGRNAAGQLGDGTTRDRARPVAVSGLT-----SV 519
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G H L + W +G GQLG GT+ L P +V P
Sbjct: 520 LAIAAGGSHVLALRS--------DGDVWAWGYNALGQLGDGTSGDKLTPVRV---PGLAP 568
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ SV G + + +++ G VW+WG L + R +SP+ + G
Sbjct: 569 IQSVAAGTYFSMALANDGTVWTWGEGFEGQLGDGGGVQR------LSPVAVKG------- 615
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D ++ G+AH + V DG +W+WG G LG G +D FAP V
Sbjct: 616 LSDIRNISVGSAHALAVRGDG-TVWAWGDNNEGQLGDGSWMDRFAPVQV 663
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/303 (28%), Positives = 122/303 (40%), Gaps = 56/303 (18%)
Query: 76 SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
SV +GG SL + G +W WG L D +T + P V G +V V
Sbjct: 821 SVASGGQHSLVLACDGTVWTWGENQRGQLGDGTTS------ARVAPGRVEGLEG--IVAV 872
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G + +AL S D ++WGAN +GQ+G G E RL P+ IE + V
Sbjct: 873 AGGGDTSLALRS--------DGTVWAWGANASGQVGDGTVEDRLTPRRIEALSD-----V 919
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G H + + W +G +GQLG G +L+P +VK L
Sbjct: 920 MVIALGESHALAVGE--------DGTVWAWGANASGQLGDGGETPSLLPARVKGLEG--- 968
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG-P 311
+ SV G + V G W+WG + L ++ +R PH
Sbjct: 969 VGSVAAGRAFSLAVRDDGTAWAWGANESGQLGDGSNQSRRV--------------PHRVA 1014
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
+ V+ GA H + + +DG +W+WG G LG G T F V+WP E
Sbjct: 1015 SVKGLRAVSAGAHHAMALGEDG-AVWAWGDNTLGQLGDG-TSAF----TVMWPQRVAELS 1068
Query: 372 QDE 374
E
Sbjct: 1069 DVE 1071
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 122/318 (38%), Gaps = 61/318 (19%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + T P+ + ++ AGG S+A+ + G +W WG L D ++E
Sbjct: 1204 LGDGTTTARAVPVPVQGLRDVVAIAAGGYHSVAVRSDGTVWTWGYNTFGQLGDGTSE--- 1260
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V G V V G H +AL + D WG N +GQLG G
Sbjct: 1261 ---SRALPVQVHKLEG--VQAVTGGDHHSLALHA--------DGTVSGWGHNASGQLGDG 1307
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R R P ++ + + EV G+ HT L + WT+G +GQL
Sbjct: 1308 SRTDRYTPVRLKDVD-----GLTEVRAGAAHTVALGK--------DGTVWTWGDNAHGQL 1354
Query: 231 GHGTT--QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPN 286
G G T + LVP+ V LP ++ G +H+ ++WG LG+ N
Sbjct: 1355 GDGVTGPRMRLVPKPVSGLPAAT---AIGAGAWHSFASGPEEGAFTWGRNSHGQLGVGDN 1411
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
A R E P K ++V G A T L L SWG G
Sbjct: 1412 AP--RAE--------------PQRMKLLSGLKVIAGGADTSLAMTQEGVLMSWGSSLHGT 1455
Query: 347 LGTGKTIDFFAPAIVLWP 364
LG G +P VL P
Sbjct: 1456 LGLGVLGQRASPGRVLLP 1473
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 117/283 (41%), Gaps = 51/283 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT-V 129
+ +V A G ++A+ G L WG+ L D +T + SP + G T V
Sbjct: 1124 VVTVGAWGQHAVALMADGTLQAWGDNATGQLGDGTT--------TRRSSPG-EIRGVTRV 1174
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V+ G+ H +AL D ++WGAN GQLG G +R P ++
Sbjct: 1175 TAVSTGAWHSLALR--------LDGTVWAWGANGFGQLGDGTTTARAVPVPVQGLRD--- 1223
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + G +H+ + + WT+G GQLG GT++S +P QV +L
Sbjct: 1224 --VVAIAAGGYHSVAVRS--------DGTVWTWGYNTFGQLGDGTSESRALPVQVHKLEG 1273
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V G H+ + + G V WG + L D +P+ +
Sbjct: 1274 ---VQAVTGGDHHSLALHADGTVSGWGHNA------SGQLGDGSRTDRYTPVRLK----- 1319
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+V GAAHTV + DG +W+WG G LG G T
Sbjct: 1320 --DVDGLTEVRAGAAHTVALGKDG-TVWTWGDNAHGQLGDGVT 1359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 114/288 (39%), Gaps = 43/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I ++ G +LA+ G +W WG+ + G S + F P V + G + V+
Sbjct: 619 IRNISVGSAHALAVRGDGTVWAWGDN---NEGQLGDGSWMDRFAPVQVRNLTG--ITAVS 673
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL + D +WG+N GQLG G SR+ P +I + +
Sbjct: 674 GGRSHSLALHA--------DGTVRAWGSNGYGQLGDGTLTSRVLPSVIPGLS-----GIQ 720
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G H L K +G GQLG G + P QV+ + + L
Sbjct: 721 ALHPGHLHVLALHADKTLRG--------WGYNRFGQLGLGAAGWSARPVQVRGIGRVERL 772
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
G H +V + G V +WG NAS + G ++ G +
Sbjct: 773 A---AGRAHALLVRADGSVVAWGA--------NASGQLGDGGTTHGARAVTVRGVSCAR- 820
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA G H++++ DG +W+WG + G LG G T AP V
Sbjct: 821 ----SVASGGQHSLVLACDG-TVWTWGENQRGQLGDGTTSARVAPGRV 863
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 77/184 (41%), Gaps = 30/184 (16%)
Query: 56 APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCP---LPDSST 106
A L D S+T+ P+++ V+AG ++A+ G +W WG+ L D T
Sbjct: 1300 ASGQLGDGSRTDRYTPVRLKDVDGLTEVRAGAAHTVALGKDGTVWTWGDNAHGQLGDGVT 1359
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
LV P PV T + G+ H A G + ++WG N++GQ
Sbjct: 1360 GPRMRLV----PKPVSGLPAATAI--GAGAWHSFA--------SGPEEGAFTWGRNSHGQ 1405
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL-LTHRKRPNDMLESMCWTFGLG 225
LG+GD R P+ ++ + +V G T+L +T S+ T GLG
Sbjct: 1406 LGVGDNAPRAEPQRMKLLSG------LKVIAGGADTSLAMTQEGVLMSWGSSLHGTLGLG 1459
Query: 226 ENGQ 229
GQ
Sbjct: 1460 VLGQ 1463
>gi|410910330|ref|XP_003968643.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Takifugu
rubripes]
Length = 527
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 114/250 (45%), Gaps = 29/250 (11%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
L S+ P + G +V ++ G+ VA+ +A D +SWG N QLG G
Sbjct: 59 LQSTIEPRRIDVLCGKKIVSLSYGTGPHVAIATA-------DGEVFSWGHNGYSQLGNGT 111
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
L P ++ T V EV CGS HT LT + + +G +GQ+G
Sbjct: 112 STHGLTPALVSTNLLGKR--VIEVACGSHHTIALT--------TDGEVFAWGYNNSGQVG 161
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G+T + P +V Q +V++ CG + V +G+++ WG N L
Sbjct: 162 SGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDSGEIYGWGYN------CNGQLGL 215
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
G+ +P I+ + + +QVACG AHT+ +TD+G+ ++SWG G LGTG
Sbjct: 216 GNNGNQQTPCRIA-----ALQGVNVIQVACGYAHTIALTDEGF-VYSWGANSYGQLGTGN 269
Query: 352 TIDFFAPAIV 361
+ P ++
Sbjct: 270 KCNQAVPTLI 279
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 13/111 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ ++ G + S+A+ ++G ++ WG NC G + TP + G V++V
Sbjct: 183 VVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNG----NQQTPCRIAALQGVNVIQV 238
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
ACG H +AL G YSWGAN+ GQLG G++ ++ P +I T
Sbjct: 239 ACGYAHTIALTDEG--------FVYSWGANSYGQLGTGNKCNQAVPTLINT 281
>gi|449446720|ref|XP_004141119.1| PREDICTED: uncharacterized protein LOC101220986 [Cucumis sativus]
Length = 1075
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 139/294 (47%), Gaps = 40/294 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVKVACG 135
V G + AI ++ L+ WG+ + +S G + +S + P V G V+ VACG
Sbjct: 323 VACGEYHTCAITSSNDLYTWGDG-IFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACG 381
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H S G+ Y++G G LG GDRES + P+ ++ S +V
Sbjct: 382 TWHSALATSNGK--------LYTFGDGTYGVLGHGDRESVVYPREVQLL---SGLRTIKV 430
Query: 196 TCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +HTA + + ++M +T+G G+ +LGHG ++ L+P V L Y +
Sbjct: 431 ACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH 490
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG T ++++G V++ G L N + D + P L+
Sbjct: 491 -QLACGHNMTVALTTSGHVFTMGGTAYGQLG-------NPSSDGVIPCLV---------- 532
Query: 314 QDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CGA HTV++T +++SWGRG +G LG G D AP ++
Sbjct: 533 QDRLVGEFVEEISCGAYHTVVLTSRN-EVFSWGRGSNGRLGHGDVEDRKAPTLI 585
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 47/298 (15%)
Query: 80 GGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
GG I++ G +++WG + LPD ++ TP P+ V ++ACG
Sbjct: 215 GGSGPDDIESLGDVYVWGEIWTDLVLPDGTSSQIPVKNDVLTPKPLETNVVLDVQQIACG 274
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H+ + GE + +WG G+LG G RP ++E + V V
Sbjct: 275 VRHIALVTRQGEVF--------TWGEECGGRLGHGIDRDFSRPHLVEFL---AVSHVDFV 323
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CG +HT +T ND+ W G+ +G LGHGT S +P++V + + ++S
Sbjct: 324 ACGEYHTCAITS---SNDL---YTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLS 377
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI---LISGNGPHGPK 312
V CG +H+++ +S G ++++G + G+ L + + P L+SG
Sbjct: 378 VACGTWHSALATSNGKLYTFG-DGTYGV-----LGHGDRESVVYPREVQLLSG------- 424
Query: 313 FQDPVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++VACG HT + + KL++WG G LG G + P V
Sbjct: 425 -LRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCV 481
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 80 GGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
G M++A+ +G ++ G L + S++G P V D G V +++CG
Sbjct: 495 GHNMTVALTTSGHVFTMGGTAYGQLGNPSSDG-------VIPCLVQDRLVGEFVEEISCG 547
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H V L S E + SWG +NG+LG GD E R P +IE V +
Sbjct: 548 AYHTVVLTSRNEVF--------SWGRGSNGRLGHGDVEDRKAPTLIEALKDRH---VKSI 596
Query: 196 TCGSFHTALLTHRKRPNDMLESMC 219
+CGS TA + K + +S+C
Sbjct: 597 SCGSNFTASICIHKWVSGADQSVC 620
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG+ H ++V+ G+V++WG E G LG + +R P L+ F
Sbjct: 271 IACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR--------PHLVEFLAVSHVDF 322
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVL 362
VACG HT +T L++WG G SG+LG G I + P V+
Sbjct: 323 -----VACGEYHTCAITSSN-DLYTWGDGIFNSGILGHGTDISHWIPKRVV 367
>gi|126649317|ref|XP_001388330.1| uvb-resistance protein uvr8 [Cryptosporidium parvum Iowa II]
gi|32398856|emb|CAD98566.1| uvb-resistance protein uvr8, possible [Cryptosporidium parvum]
gi|126117424|gb|EAZ51524.1| uvb-resistance protein uvr8, putative [Cryptosporidium parvum Iowa
II]
Length = 487
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 129/291 (44%), Gaps = 41/291 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G S AI N+G L +WG + GF + P + V++VA
Sbjct: 44 ISKVSCGSNYSAAITNSGDLILWGY----GGCGQLGFGNLEDCL-VPRVNLSLKNVIQVA 98
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE---TFNQDSPW 190
C H A++S GE Y+WG + NG+LG G E + ++
Sbjct: 99 CSDRHTAAILSNGE--------LYTWGCSKNGKLGHGQFELSISNNVVSQPMKVKALEGE 150
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V+CGS+HT LT K+ T+GLG G+LGHG TQ P+ ++ L
Sbjct: 151 KVIQVSCGSYHTGCLTDDKK--------ALTWGLGLQGRLGHGDTQDIFTPKLIESLAG- 201
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ + + CG HT+++ G ++ +G L D + P L+ G
Sbjct: 202 LPIKEISCGGHHTAILLVTGKLYMFGG------GAFGKLGFGSTDDVLIPRLLEG----- 250
Query: 311 PKFQD--PVQVACGAAHTVLVTDDGYKLWSWGR-GRSGVLGTGKTIDFFAP 358
+D +V+ G+ H+ VT G K+++WG+ GR G + G DF +P
Sbjct: 251 -PLEDIQITKVSLGSQHSAAVTKCG-KVYTWGQGGRLGHIFNGPEHDFLSP 299
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 118/259 (45%), Gaps = 35/259 (13%)
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHTVVKVACGSEHVVA 141
AI + G L+ WG C G F L S P V G V++V+CGS H
Sbjct: 106 AILSNGELYTWG-CSKNGKLGHGQFELSISNNVVSQPMKVKALEGEKVIQVSCGSYHTGC 164
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
L +D +WG G+LG GD + PK+IE+ + + E++CG H
Sbjct: 165 LT--------DDKKALTWGLGLQGRLGHGDTQDIFTPKLIESL---AGLPIKEISCGGHH 213
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
TA+L ++ + FG G G+LG G+T L+P ++ + + + V G
Sbjct: 214 TAIL--------LVTGKLYMFGGGAFGKLGFGSTDDVLIPRLLEGPLEDIQITKVSLGSQ 265
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H++ V+ G V++WG LG N D +SP +S + V ++C
Sbjct: 266 HSAAVTKCGKVYTWGQGGRLGHIFNGP-----EHDFLSPKRLS-----NLEKAFIVDISC 315
Query: 322 GAAHTVLVTDDGYKLWSWG 340
G +H+V ++D G +++WG
Sbjct: 316 GNSHSVALSDVG-DIYTWG 333
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 40/246 (16%)
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
H ++ KV+CGS + A+ ++G DL+ WG GQLG G+ E L P++ +
Sbjct: 40 HLSSISKVSCGSNYSAAITNSG------DLIL--WGYGGCGQLGFGNLEDCLVPRVNLSL 91
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV---- 240
V +V C HTA + + +T+G +NG+LGHG + ++
Sbjct: 92 KN-----VIQVACSDRHTAAI--------LSNGELYTWGCSKNGKLGHGQFELSISNNVV 138
Query: 241 --PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
P +VK L + ++ V CG +HT ++ +WG LGL L + D
Sbjct: 139 SQPMKVKAL-EGEKVIQVSCGSYHTGCLTDDKKALTWG----LGL--QGRLGHGDTQDIF 191
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+P LI K +++CG HT ++ G KL+ +G G G LG G T D P
Sbjct: 192 TPKLIESLAGLPIK-----EISCGGHHTAILLVTG-KLYMFGGGAFGKLGFGSTDDVLIP 245
Query: 359 AIVLWP 364
++ P
Sbjct: 246 RLLEGP 251
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 99/206 (48%), Gaps = 25/206 (12%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG+ GQ G E P +++ S ++ +V+CGS ++A +T+ D++
Sbjct: 13 WGSTEYGQHGSKGEEVSPGPHLVDGLRHLS--SISKVSCGSNYSAAITN---SGDLI--- 64
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+G G GQLG G + LVP L ++ V C HT+ + S G++++WG
Sbjct: 65 --LWGYGGCGQLGFGNLEDCLVPRVNLSLKN---VIQVACSDRHTAAILSNGELYTWGCS 119
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTDDGYK 335
K N L + +IS ++S P K + +QV+CG+ HT +TDD K
Sbjct: 120 K------NGKLGHGQFELSISNNVVSQ--PMKVKALEGEKVIQVSCGSYHTGCLTDD-KK 170
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+WG G G LG G T D F P ++
Sbjct: 171 ALTWGLGLQGRLGHGDTQDIFTPKLI 196
>gi|383453816|ref|YP_005367805.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380728295|gb|AFE04297.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 748
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 88/305 (28%), Positives = 128/305 (41%), Gaps = 51/305 (16%)
Query: 60 LEDDSKTNHKAPIKIC-----SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
L D + T P+ + ++ AG SLA+ GA+W WG+ T
Sbjct: 282 LGDGTNTQRTQPVSVSLTDVRTLVAGNYHSLAVRTDGAVWAWGDNRYRQLGT-------G 334
Query: 115 SFTPSPVWDFHGHTV-VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ T SP+ G T V + G H VAL G D +SWG N GQLG E
Sbjct: 335 NLTSSPLPLQAGMTGGVTLVAGYRHSVAL--------GADGTAWSWGDNVFGQLGDTTFE 386
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R+ P + + T G HT +L R W +G + GQLG+G
Sbjct: 387 PRMAPVQVSGLALGRA----DATSGQLHTVMLGANGR--------LWAWGDNQQGQLGNG 434
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T Q + +P V ++SV G HT+ + S G VW+WGM + G ++T
Sbjct: 435 TQQDSSLPLPVN----LTDVISVASGYRHTAALRSDGTVWTWGMNR-FGQLGEGTVT--- 486
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D +P+ + G G +A G H++ + +G +W+WG R G LG G +
Sbjct: 487 --DRPTPVQVVGLG-------GVTAIATGDNHSLALRSNG-TVWAWGFNRYGQLGDGTAV 536
Query: 354 DFFAP 358
D P
Sbjct: 537 DRRQP 541
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 129/308 (41%), Gaps = 49/308 (15%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + + T+ P+++ ++ G SLA+ + G +W WG G + V
Sbjct: 480 LGEGTVTDRPTPVQVVGLGGVTAIATGDNHSLALRSNGTVWAWG---FNRYGQLGDGTAV 536
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P +V +A G H +AL S D +++G N +GQLG G R
Sbjct: 537 DRRQPVQASGLS--NIVAIAAGGSHSLALRS--------DGTVWAFGYNFDGQLGNGTRT 586
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
L P ++ S V + GS ++ L + W +G +GQLG G
Sbjct: 587 WTLVP--VQAVGLSS---VVSLAAGSLYSLAL--------RADGTVWAWGYNASGQLGVG 633
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TTQ + P QV P + S+ G +H+ + S G VW+WG L S R
Sbjct: 634 TTQGSAQPLQV---PGLSGITSIAAGSYHSLALRSDGWVWAWGFNFEGQLGNGTSTPR-- 688
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+SP L++G + V + G H++ + DG +W+WG G LGTG T
Sbjct: 689 ----LSPGLVAG-------MSNAVAIIAGDQHSLAMKADG-TVWAWGLNIKGQLGTGDTT 736
Query: 354 DFFAPAIV 361
+ + P V
Sbjct: 737 EAWFPVQV 744
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/298 (29%), Positives = 120/298 (40%), Gaps = 50/298 (16%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + +P+++ SV AG SLA+D GA+W WG+ S G +L
Sbjct: 82 LGDGTSRDKASPVQVAGLTQVTSVAAGDQYSLALDADGAVWAWGDNA---SGQLGDGTLT 138
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V VV +A G HV+AL + D ++WG N N QLG G
Sbjct: 139 SRLLPQRVSAL--SNVVSLASGFAHVLALRA--------DGTVWAWGDNRNNQLGDGTLT 188
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P + + V V GS AL + W +G GQLG G
Sbjct: 189 RSSVPLQVPGLSG----VVAVVAGGSSSLAL---------RADGTLWAWGDNRYGQLGDG 235
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT + P QV L VSV G +H + + G VW+WG L + R +
Sbjct: 236 TTVRRITPVQVASLDSV---VSVSVGAYHALALRADGTVWAWGHNAYGQLGDGTNTQRTQ 292
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P+ +S D + G H++ V DG +W+WG R LGTG
Sbjct: 293 ------PVSVS--------LTDVRTLVAGNYHSLAVRTDG-AVWAWGDNRYRQLGTGN 335
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 98/232 (42%), Gaps = 38/232 (16%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V++A G H +A+ S D ++WG N GQLG G + P + Q
Sbjct: 53 VRLALGQYHSLAVHS--------DGTVFAWGFNRLGQLGDGTSRDKASPVQVAGLTQ--- 101
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V G ++ L + W +G +GQLG GT S L+P++V L
Sbjct: 102 --VTSVAAGDQYSLALDA--------DGAVWAWGDNASGQLGDGTLTSRLLPQRVSALSN 151
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V L S G H + + G VW+WG + L + +LTR+ P+ +
Sbjct: 152 VVSLAS---GFAHVLALRADGTVWAWGDNRNNQLG-DGTLTRSSV-----PLQV------ 196
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P V V G + ++ + DG LW+WG R G LG G T+ P V
Sbjct: 197 -PGLSGVVAVVAGGSSSLALRADG-TLWAWGDNRYGQLGDGTTVRRITPVQV 246
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 116/288 (40%), Gaps = 43/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV +G + A+ + G +W WG + G ++ TP V G V +A
Sbjct: 450 VISVASGYRHTAALRSDGTVWTWG---MNRFGQLGEGTVTDRPTPVQVVGLGG--VTAIA 504
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL S G ++WG N GQLG G R +P + +
Sbjct: 505 TGDNHSLALRSNG--------TVWAWGFNRYGQLGDGTAVDRRQPVQASGLSN-----IV 551
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G H+ L + W FG +GQLG+GT LVP Q L +
Sbjct: 552 AIAAGGSHSLALRS--------DGTVWAFGYNFDGQLGNGTRTWTLVPVQAVGLSS---V 600
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
VS+ G ++ + + G VW+WG + L + P+ + P
Sbjct: 601 VSLAAGSLYSLALRADGTVWAWGYNA------SGQLGVGTTQGSAQPLQV-------PGL 647
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G+ H++ + DG+ +W+WG G LG G + +P +V
Sbjct: 648 SGITSIAAGSYHSLALRSDGW-VWAWGFNFEGQLGNGTSTPRLSPGLV 694
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 128/310 (41%), Gaps = 56/310 (18%)
Query: 58 DSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEG 108
+ L D + T P+++ +V AGG SLA+ G LW WG+ L D +T
Sbjct: 180 NQLGDGTLTRSSVPLQVPGLSGVVAVVAGGSSSLALRADGTLWAWGDNRYGQLGDGTT-- 237
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
V TP V +VV V+ G+ H +AL + D ++WG N GQLG
Sbjct: 238 ----VRRITPVQVASLD--SVVSVSVGAYHALALRA--------DGTVWAWGHNAYGQLG 283
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G R +P + + V + G++H+ L R + W +G
Sbjct: 284 DGTNTQRTQPVSVSLTD------VRTLVAGNYHS--LAVRT------DGAVWAWGDNRYR 329
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG G S+ +P Q + V LV G H+ + + G WSWG + G + +
Sbjct: 330 QLGTGNLTSSPLPLQAG-MTGGVTLV---AGYRHSVALGADGTAWSWG-DNVFGQLGDTT 384
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
++P+ +SG G HTV++ +G +LW+WG + G LG
Sbjct: 385 FEPR-----MAPVQVSG------LALGRADATSGQLHTVMLGANG-RLWAWGDNQQGQLG 432
Query: 349 TGKTIDFFAP 358
G D P
Sbjct: 433 NGTQQDSSLP 442
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 82/197 (41%), Gaps = 38/197 (19%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L + ++T P++ + S+ AG + SLA+ G +W WG + L +T+G
Sbjct: 580 LGNGTRTWTLVPVQAVGLSSVVSLAAGSLYSLALRADGTVWAWGYNASGQLGVGTTQG-- 637
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V G + +A GS H +AL S D ++WG N GQLG G
Sbjct: 638 ----SAQPLQVPGLSG--ITSIAAGSYHSLALRS--------DGWVWAWGFNFEGQLGNG 683
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
RL P ++ + + G H+ + + W +GL GQL
Sbjct: 684 TSTPRLSPGLVAGMSN-----AVAIIAGDQHSLAMKA--------DGTVWAWGLNIKGQL 730
Query: 231 GHGTTQSALVPEQVKEL 247
G G T A P QV+ +
Sbjct: 731 GTGDTTEAWFPVQVQGI 747
>gi|198417628|ref|XP_002119426.1| PREDICTED: hect domain and RLD 2 [Ciona intestinalis]
Length = 2335
Score = 94.7 bits (234), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
PIK +V +GG ++A+ G ++ WG+ + G S + TP + F +
Sbjct: 515 PIKKLAVHSGGRHAMALTYDGHVYSWGDG---EEGKLGHGSRADALTPRKIETFPEKCIR 571
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CGS H A+ S+G Y+WG G+LG G+ + L+PK ++ S
Sbjct: 572 DISCGSSHSAAIGSSG--------TLYTWGHGMYGRLGHGNNHTLLKPKPVQAL---SGQ 620
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V CGS L + + + +++G G+ G+LG G + VP+ V+ L
Sbjct: 621 QVVQVACGSRDAQTLCLTQ------DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQ 674
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGN 306
+V ++CG + +S G VW+WG KG LG + + R P ++ G
Sbjct: 675 -DVVKIECGAQFSLALSRCGLVWTWG--KGDYFRLGHGSDQHVRR--------PQVVEGL 723
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
H V VA GA H + VT+ G ++++WG G G G T
Sbjct: 724 REH-----KVVDVAVGALHCLAVTEGG-QVFAWGDNDHGQQGNGGT 763
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 60/337 (17%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG + S+ +P +IE + I SV AGG LA+ N G
Sbjct: 1470 GRLGIGSNESVAIPTLIESIQHVH----------------ITQVSVNAGGKHILALSNEG 1513
Query: 92 ALWMWGNCPLPDSSTEG--GFSLVSSFT-PSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
++ WG +G G SS P + G +VKVA G H A+ + G
Sbjct: 1514 EVYSWGE------GVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGG- 1566
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y+WG G+LG D E +L+PK++ + V +V CG+ L
Sbjct: 1567 -------LYTWGKGRYGRLGHEDSEDQLKPKLVNALKDN---LVVDVACGNGDAQTLCIT 1616
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ S+ W++G G+ G+LG G + VP + L ++ V CG + +S
Sbjct: 1617 EGTGG--SSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL-MGKHITHVACGSQFSLALSK 1673
Query: 269 AGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
AG V++WG KG LG + + R + +++ + + V+V+ G+
Sbjct: 1674 AGGVYTWG--KGDYYRLGHGSDEHVRRPKLIESLRGMKV-------------VEVSVGSL 1718
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H + D+G +++WG G +G G T P +V
Sbjct: 1719 HCIAAVDNG-DVYTWGDNDEGQIGDGTTQATQIPRLV 1754
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S AI ++G L+ WG+ +L+ P PV G VV+VA
Sbjct: 570 IRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLK---PKPVQALSGQQVVQVA 626
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWAV 192
CGS L +D + YSWG + G+LG G + PK +E + QD V
Sbjct: 627 CGSRDAQTLCLT------QDGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQD----V 676
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + L+ + WT+G G+ +LGHG+ Q P+ V+ L ++
Sbjct: 677 VKIECGAQFSLALSRC--------GLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREH-K 727
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V G H V+ G V++WG N + G ++ + G G K
Sbjct: 728 VVDVAVGALHCLAVTEGGQVFAWG--------DNDHGQQGNGGTTVNRKPMKVQGLEGVK 779
Query: 313 FQDPVQVACGAAHTVLVTDDGYK 335
++ACG++H++ D ++
Sbjct: 780 I---TKLACGSSHSIAFADTSHE 799
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 131/323 (40%), Gaps = 78/323 (24%)
Query: 66 TNHKAPI--------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL----- 112
+ HK P+ K+ V G A+ G ++ G ST G L
Sbjct: 449 SKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGE------STSGRLGLGPVTG 502
Query: 113 -VSSFT----PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
VS T P P+ H+ G H +AL TY G YSWG G+L
Sbjct: 503 SVSRLTQVLFPQPIKKLAVHS------GGRHAMAL-----TYDGH---VYSWGDGEEGKL 548
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G R L P+ IETF + + +++CGS H+A + +T+G G
Sbjct: 549 GHGSRADALTPRKIETFPEK---CIRDISCGSSHSAAIGS--------SGTLYTWGHGMY 597
Query: 228 GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWG------MEKG 280
G+LGHG + L P+ V+ L Q V V+ T ++ G V+SWG + +G
Sbjct: 598 GRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRG 657
Query: 281 --LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C + R +SG QD V++ CGA ++ ++ G +W+
Sbjct: 658 GSDGCCVPKPVER-----------LSG--------QDVVKIECGAQFSLALSRCGL-VWT 697
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+G LG G P +V
Sbjct: 698 WGKGDYFRLGHGSDQHVRRPQVV 720
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 120/298 (40%), Gaps = 47/298 (15%)
Query: 31 MDGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+DG+LG +SL P +IE SL D I V GG S AI+
Sbjct: 1522 VDGKLGHGNRSSLDHPRIIE---------SLRGD---------LIVKVATGGSHSAAINA 1563
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
G L+ WG E P V + VV VACG+ L T
Sbjct: 1564 TGGLYTWGKGRYGRLGHEDS---EDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGT- 1619
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
G V +SWG + G+LG G + P II+T + V CGS + L+
Sbjct: 1620 -GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKH---ITHVACGSQFSLALSK-- 1673
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G G+ +LGHG+ + P+ ++ L + + +V V G H
Sbjct: 1674 ------AGGVYTWGKGDYYRLGHGSDEHVRRPKLIESL-RGMKVVEVSVGSLHCIAAVDN 1726
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
GDV++WG + G + + + I ++ + G H V+CG+AHTV
Sbjct: 1727 GDVYTWG-DNDEGQIGDGTTQATQ----IPRLVAALQGHH------ISHVSCGSAHTV 1773
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
T GE V ++ G G+LG+G ES P +IE+ Q V G H L++
Sbjct: 1454 TVTGEGKV-FATGYGAGGRLGIGSNESVAIPTLIESI-QHVHITQVSVNAGGKHILALSN 1511
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
E +++G G +G+LGHG S P ++ L + +V V G H++ ++
Sbjct: 1512 --------EGEVYSWGEGVDGKLGHGNRSSLDHPRIIESL-RGDLIVKVATGGSHSAAIN 1562
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
+ G +++WG + L ++ D + P L++ K V VACG A
Sbjct: 1563 ATGGLYTWGKGR------YGRLGHEDSEDQLKPKLVN-----ALKDNLVVDVACGNGDAQ 1611
Query: 326 TVLVTD---DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ +T+ +WSWG G G LG G + PAI+
Sbjct: 1612 TLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAII 1650
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 29/208 (13%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ QLG G + S+ + + Q V +V GS +T +
Sbjct: 433 FVWGLNDKDQLG-GLKGSKHKTPVASKDLQR--LKVTQVIGGSKSLFAVT--------MG 481
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ G +G+LG G ++ PQ + ++V G H ++ G V+SWG
Sbjct: 482 GKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWG 541
Query: 277 -MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDG 333
E+G L DA++P I F + ++CG++H+ + G
Sbjct: 542 DGEEG-------KLGHGSRADALTPRKIE-------TFPEKCIRDISCGSSHSAAIGSSG 587
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG G G LG G P V
Sbjct: 588 -TLYTWGHGMYGRLGHGNNHTLLKPKPV 614
Score = 38.5 bits (88), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ G ++ WG+ D +G + P V G + K+
Sbjct: 727 KVVDVAVGALHCLAVTEGGQVFAWGD---NDHGQQGNGGTTVNRKPMKVQGLEGVKITKL 783
Query: 133 ACGSEHVVAL 142
ACGS H +A
Sbjct: 784 ACGSSHSIAF 793
>gi|356569687|ref|XP_003553028.1| PREDICTED: uncharacterized protein LOC100797223 [Glycine max]
Length = 1043
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/313 (29%), Positives = 143/313 (45%), Gaps = 42/313 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTV 129
+ + +V G + A+ ++G ++ WGN D EG S + P + G ++
Sbjct: 356 LHVKNVACGEYHTCALTDSGEVYTWGNDVCCADLLIEG--RTRSQWIPQKLGGSLDGISI 413
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H + S G + ++G G LG GD S PK +E+ S
Sbjct: 414 SSVACGEWHTAIVSSCGRLF--------TYGDGTFGVLGHGDLRSYSSPKEVESL---SG 462
Query: 190 WAVYEVTCGSFHTALLTH----RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V CGS+HTA + R R N + +T+G G+ G+LGH S LVP +V
Sbjct: 463 LRVRSAACGSWHTAAIVEVMFDRFRYNSASGKL-FTWGDGDEGRLGHVDNGSKLVPTRVT 521
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-GLGLCPNASLTRNEAGDAISPILIS 304
+L Y + V V CG T +++ G V++ G K G P+A R++A +++
Sbjct: 522 QLVDYDF-VQVSCGRMLTVALTNMGKVFAMGSAKYGQLGNPHA---RDKA------VMVE 571
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G Q+ V+V ++ V V G +++WGRG +G LG G T D + P V
Sbjct: 572 GQLK-----QEFVKVISTGSYHVAVLTSGGSVYTWGRGENGQLGLGDTEDRYTPCFV--- 623
Query: 365 PLTEEFKQDELNT 377
E + ++NT
Sbjct: 624 ---EALRDRQVNT 633
>gi|93003290|tpd|FAA00228.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 2334
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 132/286 (46%), Gaps = 41/286 (14%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
PIK +V +GG ++A+ G ++ WG+ + G S + TP + F +
Sbjct: 514 PIKKLAVHSGGRHAMALTYDGHVYSWGDG---EEGKLGHGSRADALTPRKIETFPEKCIR 570
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CGS H A+ S+G Y+WG G+LG G+ + L+PK ++ S
Sbjct: 571 DISCGSSHSAAIGSSG--------TLYTWGHGMYGRLGHGNNHTLLKPKPVQAL---SGQ 619
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V CGS L + + + +++G G+ G+LG G + VP+ V+ L
Sbjct: 620 QVVQVACGSRDAQTLCLTQ------DGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQ 673
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGN 306
+V ++CG + +S G VW+WG KG LG + + R P ++ G
Sbjct: 674 -DVVKIECGAQFSLALSRCGLVWTWG--KGDYFRLGHGSDQHVRR--------PQVVEGL 722
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
H V VA GA H + VT+ G ++++WG G G G T
Sbjct: 723 REH-----KVVDVAVGALHCLAVTEGG-QVFAWGDNDHGQQGNGGT 762
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/337 (26%), Positives = 143/337 (42%), Gaps = 60/337 (17%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG + S+ +P +IE + I SV AGG LA+ N G
Sbjct: 1469 GRLGIGSNESVAIPTLIESIQHVH----------------ITQVSVNAGGKHILALSNEG 1512
Query: 92 ALWMWGNCPLPDSSTEG--GFSLVSSFT-PSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
++ WG +G G SS P + G +VKVA G H A+ + G
Sbjct: 1513 EVYSWGE------GVDGKLGHGNRSSLDHPRIIESLRGDLIVKVATGGSHSAAINATGG- 1565
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y+WG G+LG D E +L+PK++ + V +V CG+ L
Sbjct: 1566 -------LYTWGKGRYGRLGHEDSEDQLKPKLVNALKDN---LVVDVACGNGDAQTLCIT 1615
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ S+ W++G G+ G+LG G + VP + L ++ V CG + +S
Sbjct: 1616 EGTGG--SSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTL-MGKHITHVACGSQFSLALSK 1672
Query: 269 AGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
AG V++WG KG LG + + R + +++ + + V+V+ G+
Sbjct: 1673 AGGVYTWG--KGDYYRLGHGSDEHVRRPKLIESLRGMKV-------------VEVSVGSL 1717
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H + D+G +++WG G +G G T P +V
Sbjct: 1718 HCIAAVDNG-DVYTWGDNDEGQIGDGTTQATQIPRLV 1753
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/263 (26%), Positives = 116/263 (44%), Gaps = 34/263 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S AI ++G L+ WG+ +L+ P PV G VV+VA
Sbjct: 569 IRDISCGSSHSAAIGSSGTLYTWGHGMYGRLGHGNNHTLLK---PKPVQALSGQQVVQVA 625
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWAV 192
CGS L +D + YSWG + G+LG G + PK +E + QD V
Sbjct: 626 CGSRDAQTLCLT------QDGLVYSWGDGDFGKLGRGGSDGCCVPKPVERLSGQD----V 675
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + L+ + WT+G G+ +LGHG+ Q P+ V+ L ++
Sbjct: 676 VKIECGAQFSLALSRC--------GLVWTWGKGDYFRLGHGSDQHVRRPQVVEGLREH-K 726
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V G H V+ G V++WG N + G ++ + G G K
Sbjct: 727 VVDVAVGALHCLAVTEGGQVFAWG--------DNDHGQQGNGGTTVNRKPMKVQGLEGVK 778
Query: 313 FQDPVQVACGAAHTVLVTDDGYK 335
++ACG++H++ D ++
Sbjct: 779 I---TKLACGSSHSIAFADTSHE 798
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/323 (27%), Positives = 131/323 (40%), Gaps = 78/323 (24%)
Query: 66 TNHKAPI--------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL----- 112
+ HK P+ K+ V G A+ G ++ G ST G L
Sbjct: 448 SKHKTPVASKDLQRLKVTQVIGGSKSLFAVTMGGKVYACGE------STSGRLGLGPVTG 501
Query: 113 -VSSFT----PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
VS T P P+ H+ G H +AL TY G YSWG G+L
Sbjct: 502 SVSRLTQVLFPQPIKKLAVHS------GGRHAMAL-----TYDGH---VYSWGDGEEGKL 547
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G R L P+ IETF + + +++CGS H+A + +T+G G
Sbjct: 548 GHGSRADALTPRKIETFPEK---CIRDISCGSSHSAAIGS--------SGTLYTWGHGMY 596
Query: 228 GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWG------MEKG 280
G+LGHG + L P+ V+ L Q V V+ T ++ G V+SWG + +G
Sbjct: 597 GRLGHGNNHTLLKPKPVQALSGQQVVQVACGSRDAQTLCLTQDGLVYSWGDGDFGKLGRG 656
Query: 281 --LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C + R +SG QD V++ CGA ++ ++ G +W+
Sbjct: 657 GSDGCCVPKPVER-----------LSG--------QDVVKIECGAQFSLALSRCGL-VWT 696
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+G LG G P +V
Sbjct: 697 WGKGDYFRLGHGSDQHVRRPQVV 719
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 120/298 (40%), Gaps = 47/298 (15%)
Query: 31 MDGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+DG+LG +SL P +IE SL D I V GG S AI+
Sbjct: 1521 VDGKLGHGNRSSLDHPRIIE---------SLRGD---------LIVKVATGGSHSAAINA 1562
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
G L+ WG E P V + VV VACG+ L T
Sbjct: 1563 TGGLYTWGKGRYGRLGHEDS---EDQLKPKLVNALKDNLVVDVACGNGDAQTLCITEGT- 1618
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
G V +SWG + G+LG G + P II+T + V CGS + L+
Sbjct: 1619 -GGSSVVWSWGDGDYGKLGRGGSDGCKVPAIIDTLMGKH---ITHVACGSQFSLALSK-- 1672
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+T+G G+ +LGHG+ + P+ ++ L + + +V V G H
Sbjct: 1673 ------AGGVYTWGKGDYYRLGHGSDEHVRRPKLIESL-RGMKVVEVSVGSLHCIAAVDN 1725
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
GDV++WG + G + + + I ++ + G H V+CG+AHTV
Sbjct: 1726 GDVYTWG-DNDEGQIGDGTTQATQ----IPRLVAALQGHH------ISHVSCGSAHTV 1772
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 99/219 (45%), Gaps = 27/219 (12%)
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
T GE V ++ G G+LG+G ES P +IE+ Q V G H L++
Sbjct: 1453 TVTGEGKV-FATGYGAGGRLGIGSNESVAIPTLIESI-QHVHITQVSVNAGGKHILALSN 1510
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
E +++G G +G+LGHG S P ++ L + +V V G H++ ++
Sbjct: 1511 --------EGEVYSWGEGVDGKLGHGNRSSLDHPRIIESL-RGDLIVKVATGGSHSAAIN 1561
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
+ G +++WG + L ++ D + P L++ K V VACG A
Sbjct: 1562 ATGGLYTWGKGR------YGRLGHEDSEDQLKPKLVN-----ALKDNLVVDVACGNGDAQ 1610
Query: 326 TVLVTD---DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ +T+ +WSWG G G LG G + PAI+
Sbjct: 1611 TLCITEGTGGSSVVWSWGDGDYGKLGRGGSDGCKVPAII 1649
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 83/208 (39%), Gaps = 29/208 (13%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+ QLG G + S+ + + Q V +V GS +T +
Sbjct: 432 FVWGLNDKDQLG-GLKGSKHKTPVASKDLQR--LKVTQVIGGSKSLFAVT--------MG 480
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ G +G+LG G ++ PQ + ++V G H ++ G V+SWG
Sbjct: 481 GKVYACGESTSGRLGLGPVTGSVSRLTQVLFPQPIKKLAVHSGGRHAMALTYDGHVYSWG 540
Query: 277 -MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDG 333
E+G L DA++P I F + ++CG++H+ + G
Sbjct: 541 DGEEG-------KLGHGSRADALTPRKIE-------TFPEKCIRDISCGSSHSAAIGSSG 586
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG G G LG G P V
Sbjct: 587 -TLYTWGHGMYGRLGHGNNHTLLKPKPV 613
Score = 38.5 bits (88), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 3/70 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + LA+ G ++ WG+ D +G + P V G + K+
Sbjct: 726 KVVDVAVGALHCLAVTEGGQVFAWGD---NDHGQQGNGGTTVNRKPMKVQGLEGVKITKL 782
Query: 133 ACGSEHVVAL 142
ACGS H +A
Sbjct: 783 ACGSSHSIAF 792
>gi|443690304|gb|ELT92472.1| hypothetical protein CAPTEDRAFT_172844 [Capitella teleta]
Length = 4817
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 127/294 (43%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ ++ +GG LA+ G ++ WG + G + P + G VV
Sbjct: 4023 IRKVAINSGGKHCLALSAEGEVYSWGEG---EDGKLGHGNRSPCDRPRAIESLRGKEVVD 4079
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + S GE YSWG G+LG GD E + +PK+++ +
Sbjct: 4080 IAAGGAHSACITSTGE--------LYSWGKGRYGRLGHGDSEDQTKPKLVDALKG---YR 4128
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + W++G G+ G+LG G + VP ++ L Q +
Sbjct: 4129 VTDVACGSGDAQTLCITD------DDSVWSWGDGDYGKLGRGGSDGCKVPMKIDAL-QGL 4181
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
++ V+CG + ++ +G V++WG KG LG + R +
Sbjct: 4182 GVIKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGTEDHIRRPRRCTTL--------- 4230
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K V +ACG+ H V TD G ++++WG G LG G T P +V
Sbjct: 4231 -QGKKI---VSIACGSLHCVACTDAG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4279
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG ++A+ G ++ WG D G FS ++ P + V
Sbjct: 3002 IKKVAVHSGGRHAMALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALRSKRVRD 3058
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H A++S G+ Y+WG G+LG GD ++LRPK+++
Sbjct: 3059 IACGGSHSAAIISNGD--------LYTWGLGEYGRLGHGDNTTQLRPKLVKALEGQR--- 3107
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V GS L +++G G+ G+LG G ++ VP ++ L V
Sbjct: 3108 VIQVALGSRDAQTLALTD------SGTVYSWGDGDFGKLGRGGSEGCSVPHPIERL-NGV 3160
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+ ++CG + ++ +G VW+WG KG LG +A + + + + +
Sbjct: 3161 GVCQIECGAQFSLALTKSGQVWTWG--KGDYFRLGHGTDAHVRKPQLVETL--------- 3209
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + VA GA H + V D+G ++++WG G G T PA+V
Sbjct: 3210 ----KGKKVTHVAVGALHCLSVLDNG-QVYAWGDNDHGQQGNSTTTVNRKPALV 3258
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 134/296 (45%), Gaps = 34/296 (11%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P S+ + S IK+ + + G LA+ + G ++ WGN D G V+
Sbjct: 464 PQSMHEISTLADIEIIKLAA-HSEGSHCLALTSEGDVYSWGNG---DFGKLGHGDTVTCD 519
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
+P + + HG +VV VACGS H A+ ++GE ++WG + G+LGLG E L
Sbjct: 520 SPMLINELHGKSVVNVACGSHHSAAITASGE--------LFTWGRGSFGRLGLGSTEDIL 571
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
P ++ + V +V CGS + + +++G GE G+LG G ++
Sbjct: 572 TPALVSGLLGVT---VVDVACGSGDAQTIALADTGS------VYSWGDGEYGKLGRGGSE 622
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
P+ V +L Q + + V CG +++ V G V++WG +G L E
Sbjct: 623 GCKAPKLVDKL-QGLDVTRVYCGPQYSAAVCKNGAVFTWGNGEGYKLGHG-----TEEHV 676
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ + G H ++ G+ H + T++G +L SWGR G LG G T
Sbjct: 677 RFPRQVETLAGKH------VTSLSLGSHHCLATTEEG-ELLSWGRNDKGQLGEGHT 725
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 61/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKI--------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI V+ G S+A+ +GA++ WG D G + P
Sbjct: 4170 KVPMKIDALQGLGVIKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGTEDHIRRPRR 4226
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
G +V +ACGS H VA AGE Y+WG N+ GQLG G + RP++
Sbjct: 4227 CTTLQGKKIVSIACGSLHCVACTDAGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4278
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ + V CGS H+
Sbjct: 4279 VAALQGKK---INRVACGSAHS 4297
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 23/152 (15%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +++G G+ G+LGHG T + P + EL +V+V CG H++ ++++G++++W
Sbjct: 496 EGDVYSWGNGDFGKLGHGDTVTCDSPMLINEL-HGKSVVNVACGSHHSAAITASGELFTW 554
Query: 276 GM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLV 329
G GLG D ++P L+SG G D VACG+ A T+ +
Sbjct: 555 GRGSFGRLGLG----------STEDILTPALVSG--LLGVTVVD---VACGSGDAQTIAL 599
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D G ++SWG G G LG G + AP +V
Sbjct: 600 ADTG-SVYSWGDGEYGKLGRGGSEGCKAPKLV 630
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 18/103 (17%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI---SPILISGNGPHGPKFQDPVQ 318
H ++S GDV+SWG N + GD + SP+LI N HG V
Sbjct: 489 HCLALTSEGDVYSWG---------NGDFGKLGHGDTVTCDSPMLI--NELHGKSV---VN 534
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VACG+ H+ +T G +L++WGRG G LG G T D PA+V
Sbjct: 535 VACGSHHSAAITASG-ELFTWGRGSFGRLGLGSTEDILTPALV 576
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 27/230 (11%)
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVY 193
S+ + V G K + WG N+ QLG G + S+++ P I ET S
Sbjct: 2895 ASQVMAKKVKCGSGVKDIQTQVFVWGLNDKDQLG-GPKGSKIKTPGINETL---STLKCV 2950
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVY 252
++ GS +T + + G NG+LG G + + P Q+ L QYV
Sbjct: 2951 QIVGGSKSLFCVTQ--------DGKLFACGEATNGRLGLGISAGNVPQPRQLTSLSQYVI 3002
Query: 253 -LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V+V G H ++ G V+SWG + L + P LI
Sbjct: 3003 KKVAVHSGGRHAMALTVDGKVFSWGEGD------DGKLGHFSRMNCDKPRLI--EALRSK 3054
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +D +ACG +H+ + +G L++WG G G LG G P +V
Sbjct: 3055 RVRD---IACGGSHSAAIISNG-DLYTWGLGEYGRLGHGDNTTQLRPKLV 3100
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 56/131 (42%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ +C ++ G SLA+ +G +W WG D G + P V G V
Sbjct: 3160 VGVCQIECGAQFSLALTKSGQVWTWGKG---DYFRLGHGTDAHVRKPQLVETLKGKKVTH 3216
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H ++++ G+ Y +WG N++GQ G +P +++
Sbjct: 3217 VAVGALHCLSVLDNGQVY--------AWGDNDHGQQGNSTTTVNRKPALVQGLEG---CK 3265
Query: 192 VYEVTCGSFHT 202
+ V CGS H+
Sbjct: 3266 ISRVACGSSHS 3276
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 235 TQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLT 290
T S P ++ + Q+V++ V+++ G H +S+ G+V+SWG E G LG +
Sbjct: 4006 TDSVATPTLIESI-QHVFIRKVAINSGGKHCLALSAEGEVYSWGEGEDGKLGHGNRSPCD 4064
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R A +++ + ++ V +A G AH+ +T G +L+SWG+GR G LG G
Sbjct: 4065 RPRAIESL-------------RGKEVVDIAAGGAHSACITSTG-ELYSWGKGRYGRLGHG 4110
Query: 351 KTIDFFAPAIV 361
+ D P +V
Sbjct: 4111 DSEDQTKPKLV 4121
>gi|218781264|ref|YP_002432582.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218762648|gb|ACL05114.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 1525
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 123/290 (42%), Gaps = 48/290 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V AGG SLA+ G+LW WG+ G S V+ FTP+ V K+A G
Sbjct: 986 VAAGGNFSLALKTDGSLWSWGDNGTGQLGLGLGQS-VNVFTPTKVDAL--PPAAKIAAGD 1042
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFNQDSPWAVY 193
H +AL G +SWG N++GQLGLG ++ RP+ I + V
Sbjct: 1043 NHALALAPDGSV--------WSWGYNSDGQLGLGSSGTYSTKNRPQKINAISN-----VA 1089
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG H+ + + W++G GQLG G S P++V + +
Sbjct: 1090 AIACGGSHSLAVAR--------DGSLWSWGYNYYGQLGLGDNYSKTTPQKVNAISN---V 1138
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ G +++ ++ G VWSWG + LGL N + + +S +
Sbjct: 1139 AAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSNV---------- 1188
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G H++ +T DG +WSWGR G LG D P V
Sbjct: 1189 -----AAIAAGEDHSLALTRDG-SVWSWGRNSRGQLGLDDNDDRNTPQPV 1232
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 101/244 (41%), Gaps = 48/244 (19%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLGF+G ++ P + + SV AG SLA+ N G
Sbjct: 197 GQLGFTGDHADAPVQVAGL--------------------SNVKSVAAGEFFSLALKNDGT 236
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
+W WGN T G + + TP+P+ + +A G H +AL E
Sbjct: 237 VWAWGNNESAQLGT--GIAGEAVATPAPIAVLS--NITAIAAGRRHAMALA--------E 284
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D ++WGAN +GQLG GD E+ P + + V + G FH+ LT
Sbjct: 285 DGSVWAWGANGSGQLGFGDFETPKAPGRVSSLAD-----VTAIASGWFHSLALTS----- 334
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ + W +G +G+LG T +P QV + V G H+ +++ G V
Sbjct: 335 ---DGVLWAWGNNGDGRLGTDATSDQSLPAQVSSISNAVSFAG---GQRHSLAIAADGSV 388
Query: 273 WSWG 276
WSWG
Sbjct: 389 WSWG 392
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 120/289 (41%), Gaps = 44/289 (15%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD 123
+ TN A S+ AGG +LA+ + G++W WG + G + + P +
Sbjct: 536 TPTNVDALPLAASIAAGGGHALALASDGSVWSWGRNSVGQLGLGTGGTYSTENRPQKINA 595
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
V +ACG H +AL G +SWG N GQLGLGD S+ P+ +
Sbjct: 596 I--SNVAAIACGGSHSLALARDGS--------FWSWGYNYYGQLGLGDNVSKTTPRKVNA 645
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
+ V + G H+ LT L+ W++G GQLG G P +
Sbjct: 646 LSN-----VVAMAAGDRHSLALT--------LDGSLWSWGDNTYGQLGLGDNDHRNTPRK 692
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPI 301
V + +V++ G H+ ++ G VWSWG LGL N + IS I
Sbjct: 693 VNAISN---VVAIAAGYRHSLALTRDGSVWSWGNNTRGQLGLGDNDDRNTPQPVTTISNI 749
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+A G +++ ++++G +W+WG SG LG G
Sbjct: 750 KA---------------IAVGNNYSIAISEEGL-VWAWGYNCSGQLGIG 782
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 123/283 (43%), Gaps = 52/283 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ ++ GG SLA+ G+LW WG + G L +++ + T KV
Sbjct: 1087 NVAAIACGGSHSLAVARDGSLWSWG------YNYYGQLGLGDNYSKT--------TPQKV 1132
Query: 133 ACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
S VA ++AGE Y D +SWG N++GQLGLGD E R P+ +E +
Sbjct: 1133 NAISN--VAAIAAGEYYSLALTRDGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSN--- 1187
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + G H+ LT + W++G GQLG P+ V +
Sbjct: 1188 --VAAIAAGEDHSLALTR--------DGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISN 1237
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ ++ G H+ +S G W+WG + LG+ + SL NE N
Sbjct: 1238 ---IKAIAAGNSHSFAISEEGLAWAWGYNYDGQLGIGTSGSLA-NE------------NT 1281
Query: 308 PHGPK-FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
P K + V ++ G H++ +T+DG LW+WG G +G+
Sbjct: 1282 PQKVKVISNVVGLSGGNYHSLALTEDG-ALWAWGDNDDGQIGS 1323
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 119/282 (42%), Gaps = 52/282 (18%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS----PVWDFHGHTVVKV 132
+ AG +LA+ G++W WG +++G L SS T S P V +
Sbjct: 1038 IAAGDNHALALAPDGSVWSWG------YNSDGQLGLGSSGTYSTKNRPQKINAISNVAAI 1091
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H +A+ G +SWG N GQLGLGD S+ P+ + + V
Sbjct: 1092 ACGGSHSLAVARDGS--------LWSWGYNYYGQLGLGDNYSKTTPQKVNAISN-----V 1138
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G +++ LT + W++G +GQLG G + P++V+ L
Sbjct: 1139 AAIAAGEYYSLALTR--------DGSVWSWGDNSDGQLGLGDNEDRNTPQKVEVLSN--- 1187
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ ++ G H+ ++ G VWSWG LGL N + IS I
Sbjct: 1188 VAAIAAGEDHSLALTRDGSVWSWGRNSRGQLGLDDNDDRNTPQPVTTISNIKA------- 1240
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+A G +H+ ++++G W+WG G LG G +
Sbjct: 1241 --------IAAGNSHSFAISEEGLA-WAWGYNYDGQLGIGTS 1273
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 117/280 (41%), Gaps = 56/280 (20%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP--SPVWDFHGHTVVKVACGSEHVVA 141
SLA+ G +W+WG D + G ++ P +PV +V VA G +A
Sbjct: 79 SLALKGDGTVWVWGR---NDYNQLGLGDDINRLAPEQAPVV----SNIVSVAAGRLFSLA 131
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
L S G ++WG N GQLG+GD ++RL P + V + G +H
Sbjct: 132 LASDGS--------LWAWGGNYYGQLGMGDNDNRLTPSKTPGLSD-----VAAIAGGDYH 178
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T W G ++GQLG T A P QV L + SV G F
Sbjct: 179 ALAATQSGE--------VWAMGRNDHGQLGF-TGDHADAPVQVAGLSN---VKSVAAGEF 226
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI---SPILISGNGPHGPKFQDPVQ 318
+ + + G VW+WG + +A L AG+A+ +PI + +
Sbjct: 227 FSLALKNDGTVWAWGNNE------SAQLGTGIAGEAVATPAPIAV---------LSNITA 271
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+A G H + + +DG +W+WG SG LG G DF P
Sbjct: 272 IAAGRRHAMALAEDG-SVWAWGANGSGQLGFG---DFETP 307
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 128/336 (38%), Gaps = 73/336 (21%)
Query: 68 HKAPI--KICSVKAGGMMSLAIDNAGALWMWG------------NCPLPDSSTE------ 107
+AP+ I SV AG + SLA+ + G+LW WG + L S T
Sbjct: 111 EQAPVVSNIVSVAAGRLFSLALASDGSLWAWGGNYYGQLGMGDNDNRLTPSKTPGLSDVA 170
Query: 108 ----GGFSLVSSFTPSPVW----DFHG-------HTVVKVACGSEHVVALVSAGETYK-- 150
G + +++ VW + HG H V V V+AGE +
Sbjct: 171 AIAGGDYHALAATQSGEVWAMGRNDHGQLGFTGDHADAPVQVAGLSNVKSVAAGEFFSLA 230
Query: 151 -GEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
D ++WG N + QLG G E+ P I + + + G H L
Sbjct: 231 LKNDGTVWAWGNNESAQLGTGIAGEAVATPAPIAVLSN-----ITAIAAGRRHAMALAE- 284
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ W +G +GQLG G ++ P +V L + S G FH+ ++S
Sbjct: 285 -------DGSVWAWGANGSGQLGFGDFETPKAPGRVSSLADVTAIAS---GWFHSLALTS 334
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G +W+WG + L + D P +S + V A G H++
Sbjct: 335 DGVLWAWGNNG------DGRLGTDATSDQSLPAQVS-------SISNAVSFAGGQRHSLA 381
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+ DG +WSWG G LG ++ PA VL P
Sbjct: 382 IAADG-SVWSWGGNAYGQLG----VESLTPASVLTP 412
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 103/236 (43%), Gaps = 40/236 (16%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF 110
+ +G D++ + A + ++ AG SLA+ G+LW WG+ +T G
Sbjct: 626 YGQLGLGDNVSKTTPRKVNALSNVVAMAAGDRHSLALTLDGSLWSWGD------NTYGQL 679
Query: 111 SLVSS---FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
L + TP V VV +A G H +AL G + SWG N GQL
Sbjct: 680 GLGDNDHRNTPRKVNAIS--NVVAIAAGYRHSLALTRDGSVW--------SWGNNTRGQL 729
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
GLGD + R P+ + T + + + G+ ++ ++ E + W +G +
Sbjct: 730 GLGDNDDRNTPQPVTTISN-----IKAIAVGNNYSIAISE--------EGLVWAWGYNCS 776
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVS----VDCGLFHTSVVSSAGDVWSWGMEK 279
GQLG G T +L E PQ V ++S + G H+ ++ G +W+WG +
Sbjct: 777 GQLGIG-THGSLADENT---PQKVIVISNVVGLSAGSSHSIALTEDGALWAWGNNE 828
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 49/115 (42%), Gaps = 22/115 (19%)
Query: 244 VKELPQYVYLVS----VDCGLFHTSVVSSAGDVWSWGME--KGLGLCPNASLTRNEAGDA 297
+ PQ + +S + CG H+ ++ G WSWG LGL N S T +A
Sbjct: 586 TENRPQKINAISNVAAIACGGSHSLALARDGSFWSWGYNYYGQLGLGDNVSKTTPRKVNA 645
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+S + V +A G H++ +T DG LWSWG G LG G
Sbjct: 646 LSNV---------------VAMAAGDRHSLALTLDG-SLWSWGDNTYGQLGLGDN 684
>gi|338723782|ref|XP_001915115.2| PREDICTED: LOW QUALITY PROTEIN: e3 ISG15--protein ligase HERC5
[Equus caballus]
Length = 966
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 99/208 (47%), Gaps = 23/208 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG G + S+ TP V G +V+++
Sbjct: 84 IIQITCGDYHSLALSKGGELFAWGQNTYGQLGV--GRTFASTPTPQIVEHLSGVPLVQIS 141
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL + YSWG N+ GQLGLG ++ P +IE + V
Sbjct: 142 AGEAHSMALSMSRNV--------YSWGRNDCGQLGLGHTNNKDSPSLIEALDNQE---VE 190
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + + +TFG G+ GQLGH +TQ+ L P V EL +
Sbjct: 191 FLACGGSHTALLTK--------DGLVFTFGAGKCGQLGHNSTQNELTPCLVTELVGK-RV 241
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWGMEKG 280
+ CG HT + VS G V+S+G +G
Sbjct: 242 TQIACGRRHTLAYVSDLGKVFSFGSGEG 269
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 114/246 (46%), Gaps = 35/246 (14%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQ 186
++++ CG H +AL GE ++WG N GQLG+G S P+I+E
Sbjct: 83 NIIQITCGDYHSLALSKGGE--------LFAWGQNTYGQLGVGRTFASTPTPQIVEHL-- 132
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T + P ++
Sbjct: 133 -SGVPLVQISAGEAHSMALSMSRN--------VYSWGRNDCGQLGLGHTNNKDSPSLIEA 183
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Q V ++ CG HT++++ G V+++G G C L N + ++P L++
Sbjct: 184 LDNQEVEFLA--CGGSHTALLTKDGLVFTFGA----GKC--GQLGHNSTQNELTPCLVTE 235
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
+ Q+ACG HT+ D K++S+G G G LG G T P + + P
Sbjct: 236 LVG-----KRVTQIACGRRHTLAYVSDLGKVFSFGSGEGGQLGNGATHHQLIP-LPMKLP 289
Query: 366 LTEEFK 371
EE K
Sbjct: 290 SNEELK 295
>gi|115373014|ref|ZP_01460317.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310821893|ref|YP_003954251.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|115369926|gb|EAU68858.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309394965|gb|ADO72424.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 864
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/311 (28%), Positives = 129/311 (41%), Gaps = 46/311 (14%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S N P+ + ++ AGG SLA+ G +W WG +S G L
Sbjct: 95 LGDGSTQNRTLPVNVLGLPSIKAISAGGSYSLAVGADGKVWAWG---ANNSGQLGTGYLG 151
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLG 170
+ + S DF V V G A VS G + +D ++WGAN GQLG G
Sbjct: 152 NGKSGSEYADFQVTPVSIVIPGG---AAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDG 208
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+RL P + P + G +H+ + R W +G +GQ+
Sbjct: 209 TTANRLAPVSVNI-----PGGAIAIAAGWYHSLAIARDGR--------VWAWGRNNSGQV 255
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+G T + L P V P ++V G H+ VV S G VWSWG L ++ T
Sbjct: 256 GNGGTANQLTP-VVVAFPGSA--IAVAGGGSHSLVVLSNGTVWSWGANNAGQLGDGSNAT 312
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R +SPI + P +VA G ++ +T DG +WSWG+ G LG G
Sbjct: 313 R------VSPIQV-------PGIGVATKVAAGGYFSLAITSDG--VWSWGQNTRGQLGNG 357
Query: 351 KTIDFFAPAIV 361
+ P +
Sbjct: 358 SLANSSVPVFI 368
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 104/245 (42%), Gaps = 42/245 (17%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+T V+ GS H + L S G +WG NN+GQLG G ++R P +
Sbjct: 63 NTQQGVSAGSYHSLLLRSTGAVL--------AWGQNNSGQLGDGSTQNRTLPVNVLGL-- 112
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-----HGTTQSALVP 241
P GS+ A+ K W +G +GQLG +G + S
Sbjct: 113 --PSIKAISAGGSYSLAVGADGK---------VWAWGANNSGQLGTGYLGNGKSGSEYAD 161
Query: 242 EQVKELPQYV--YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
QV + + +V GL H+ ++ G +W+WG L + R ++
Sbjct: 162 FQVTPVSIVIPGGAAAVSGGLNHSLALAKDGKLWAWGANTYGQLGDGTTANR------LA 215
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+ + N P G + +A G H++ + DG ++W+WGR SG +G G T + P
Sbjct: 216 PVSV--NIPGGA-----IAIAAGWYHSLAIARDG-RVWAWGRNNSGQVGNGGTANQLTPV 267
Query: 360 IVLWP 364
+V +P
Sbjct: 268 VVAFP 272
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 60/228 (26%), Positives = 84/228 (36%), Gaps = 55/228 (24%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + N AP+ + ++ AG SLAI G +W WG +S G
Sbjct: 205 LGDGTTANRLAPVSVNIPGGAIAIAAGWYHSLAIARDGRVWAWG---RNNSGQVGNGGTA 261
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ TP V F G + + VA G H + ++S G + SWGANN GQLG G
Sbjct: 262 NQLTPVVV-AFPG-SAIAVAGGGSHSLVVLSNGTVW--------SWGANNAGQLGDGSNA 311
Query: 174 SRLRPKIIE----------------TFNQDSPWAVYEVTCGSFHTALLTHRKRP------ 211
+R+ P + D W+ + T G L + P
Sbjct: 312 TRVSPIQVPGIGVATKVAAGGYFSLAITSDGVWSWGQNTRGQLGNGSLANSSVPVFITAT 371
Query: 212 ------------NDMLESMC--WTFGLGENGQLGHGTTQSALVPEQVK 245
+ +L C W +G GQLG GT L P Q +
Sbjct: 372 SNALALSGGYHHSLILRPGCPIWAWGFNAYGQLGDGTLVDRLAPVQAE 419
>gi|449523373|ref|XP_004168698.1| PREDICTED: uncharacterized protein LOC101228735, partial [Cucumis
sativus]
Length = 958
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 140/296 (47%), Gaps = 44/296 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVKVACG 135
V G + AI ++ L+ WG+ + +S G + +S + P V G V+ VACG
Sbjct: 185 VACGEYHTCAITSSNDLYTWGDG-IFNSGILGHGTDISHWIPKRVVGSLEGLQVLSVACG 243
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H S G+ Y++G G LG GDRES + P+ ++ S +V
Sbjct: 244 TWHSALATSNGK--------LYTFGDGTYGVLGHGDRESVVYPREVQLL---SGLRTIKV 292
Query: 196 TCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +HTA + + ++M +T+G G+ +LGHG ++ L+P V L Y +
Sbjct: 293 ACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCVSSLIDYNFH 352
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ CG T ++++G V++ G LG N + D + P L+
Sbjct: 353 -QLACGHNMTVALTTSGHVFTMGGTAYGQLG---------NPSSDGVIPCLV-------- 394
Query: 312 KFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CGA HTV++T +++SWGRG +G LG G D AP ++
Sbjct: 395 --QDRLVGEFVEEISCGAYHTVVLTSRN-EVFSWGRGSNGRLGHGDVEDRKAPTLI 447
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 130/298 (43%), Gaps = 47/298 (15%)
Query: 80 GGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
GG I++ G +++WG + LPD ++ TP P+ V ++ACG
Sbjct: 77 GGSGPDDIESLGDVYVWGEIWTDLVLPDGTSSQIPVKNDVLTPKPLETNVVLDVQQIACG 136
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H+ + GE + +WG G+LG G RP ++E + V V
Sbjct: 137 VRHIALVTRQGEVF--------TWGEECGGRLGHGIDRDFSRPHLVEFL---AVSHVDFV 185
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CG +HT +T ND+ W G+ +G LGHGT S +P++V + + ++S
Sbjct: 186 ACGEYHTCAITSS---NDL---YTWGDGIFNSGILGHGTDISHWIPKRVVGSLEGLQVLS 239
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI---LISGNGPHGPK 312
V CG +H+++ +S G ++++G + G+ L + + P L+SG
Sbjct: 240 VACGTWHSALATSNGKLYTFG-DGTYGV-----LGHGDRESVVYPREVQLLSG------- 286
Query: 313 FQDPVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++VACG HT + + KL++WG G LG G + P V
Sbjct: 287 -LRTIKVACGVWHTAAIVEVMSQTGSNMSSRKLFTWGDGDKYRLGHGNKETYLLPTCV 343
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 66/144 (45%), Gaps = 22/144 (15%)
Query: 80 GGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
G M++A+ +G ++ G L + S++G P V D G V +++CG
Sbjct: 357 GHNMTVALTTSGHVFTMGGTAYGQLGNPSSDG-------VIPCLVQDRLVGEFVEEISCG 409
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H V L S E + SWG +NG+LG GD E R P +IE V +
Sbjct: 410 AYHTVVLTSRNEVF--------SWGRGSNGRLGHGDVEDRKAPTLIEALKDRH---VKSI 458
Query: 196 TCGSFHTALLTHRKRPNDMLESMC 219
+CGS TA + K + +S+C
Sbjct: 459 SCGSNFTASICIHKWVSGADQSVC 482
Score = 43.5 bits (101), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 18/111 (16%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG+ H ++V+ G+V++WG E G LG + +R P L+ F
Sbjct: 133 IACGVRHIALVTRQGEVFTWGEECGGRLGHGIDRDFSR--------PHLVEFLAVSHVDF 184
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVL 362
VACG HT +T L++WG G SG+LG G I + P V+
Sbjct: 185 -----VACGEYHTCAITSSN-DLYTWGDGIFNSGILGHGTDISHWIPKRVV 229
>gi|345795569|ref|XP_535652.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Canis lupus familiaris]
Length = 1263
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/209 (33%), Positives = 100/209 (47%), Gaps = 27/209 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
I + G SLA+ G L+ WG + + G + + P+P V G +V+
Sbjct: 379 IIQITCGDYHSLALSKGGELFAWGQ----NLHGQLGVGRLFTSIPTPQLVEHLSGVPLVQ 434
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ G H +AL +G YSWG N+ GQLGLG P +IE +
Sbjct: 435 ISAGKAHSMALSMSGN--------IYSWGRNDLGQLGLGHTNGEDFPSLIEALDNQK--- 483
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + CG HTALLT + + +TFG G+ GQLGH +TQ+ L P V EL
Sbjct: 484 VEFLACGGSHTALLTK--------DGLVFTFGAGKYGQLGHNSTQNELRPRLVTELAGN- 534
Query: 252 YLVSVDCGLFHT-SVVSSAGDVWSWGMEK 279
+ V CG +HT + VS G V+S+G K
Sbjct: 535 RVTQVACGRWHTLAYVSDLGKVFSFGSGK 563
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 117/249 (46%), Gaps = 41/249 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQ 186
+++++ CG H +AL GE ++WG N +GQLG+G + + P+++E
Sbjct: 378 SIIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRLFTSIPTPQLVEHL-- 427
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T P ++
Sbjct: 428 -SGVPLVQISAGKAHSMALS--------MSGNIYSWGRNDLGQLGLGHTNGEDFPSLIEA 478
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS- 304
L Q V ++ CG HT++++ G V+++G K L N + + P L++
Sbjct: 479 LDNQKVEFLA--CGGSHTALLTKDGLVFTFGAGK------YGQLGHNSTQNELRPRLVTE 530
Query: 305 --GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
GN QVACG HT+ D K++S+G G+ G LG G T + P + +
Sbjct: 531 LAGN--------RVTQVACGRWHTLAYVSDLGKVFSFGSGKEGQLGNGGTHNQLIP-LPM 581
Query: 363 WPPLTEEFK 371
P EE K
Sbjct: 582 KLPSNEELK 590
>gi|444919547|ref|ZP_21239559.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444708350|gb|ELW49425.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 684
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/309 (28%), Positives = 130/309 (42%), Gaps = 51/309 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D ++ N P+++ + AG + SLA+ N G +W WG G SL
Sbjct: 18 LGDGTRDNRSTPVQVLGLSEVVAAAAGSIHSLALRNDGTVWAWGYNGYGQ---LGNGSLG 74
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V G V V G H +A+ +D ++WG N NGQLG G
Sbjct: 75 SRAEPVQVQGLSGG--VSVDAGHYHSLAVR--------DDGTVWAWGDNPNGQLGEGTTT 124
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P ++ ++ V VT GS H+ L + W +G +GQLG G
Sbjct: 125 RRLVPVQVQGLSE-----VVAVTAGSSHSLALRS--------DGTVWAWGANASGQLGEG 171
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT + LVP V L + +V+V+ G H+ + S G VW+WG L + R
Sbjct: 172 TTTNRLVPVPVLGLSE---VVAVEAGSSHSLALRSDGTVWAWGANASGQLGDGTTTKR-- 226
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ P+ + V + G+ +++ V +DG +W+WG SG LG
Sbjct: 227 ----LVPVQV---------LSGVVAMEAGSGYSLAVRNDG-TVWAWGYNFSGQLGDDTVT 272
Query: 354 DFFAPAIVL 362
P VL
Sbjct: 273 SRSTPVQVL 281
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 99/345 (28%), Positives = 144/345 (41%), Gaps = 75/345 (21%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + S + P+++ SV AG SLA+ + G +W WG+ P + G +
Sbjct: 68 LGNGSLGSRAEPVQVQGLSGGVSVDAGHYHSLAVRDDGTVWAWGDNP---NGQLGEGTTT 124
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V VV V GS H +AL S D ++WGAN +GQLG G
Sbjct: 125 RRLVPVQVQGL--SEVVAVTAGSSHSLALRS--------DGTVWAWGANASGQLGEGTTT 174
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+RL P + ++ V V GS H+ L + W +G +GQLG G
Sbjct: 175 NRLVPVPVLGLSE-----VVAVEAGSSHSLALRS--------DGTVWAWGANASGQLGDG 221
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN- 292
TT LVP QV +V+++ G ++ V + G VW+WG L + +R+
Sbjct: 222 TTTKRLVPVQVLS-----GVVAMEAGSGYSLAVRNDGTVWAWGYNFSGQLGDDTVTSRST 276
Query: 293 -------------EAGDAISPILIS-------GNGPHGPKFQD-------PVQ------- 318
AG ++S L S G+ +G + + PVQ
Sbjct: 277 PVQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSNDYGQRGEGTTSNRAFPVQARGLSGG 336
Query: 319 --VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA G AH++ V DG +W+WG SG LG G T + P V
Sbjct: 337 VAVAAGYAHSLAVRSDG-TVWAWGSNASGQLGEGTTSNRSEPVQV 380
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 89/308 (28%), Positives = 133/308 (43%), Gaps = 49/308 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L DD+ T+ P+++ +V AG +SLA+ + G +W WG+ D G +
Sbjct: 266 LGDDTVTSRSTPVQVLGLSEVVAVAAGSSLSLALRSDGTVWAWGSN---DYGQRGEGTTS 322
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ P G V VA G H +A+ S D ++WG+N +GQLG G
Sbjct: 323 NRAFPVQARGLSGG--VAVAAGYAHSLAVRS--------DGTVWAWGSNASGQLGEGTTS 372
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P ++ + V V+ G+ ++ L R + W +G +GQLG G
Sbjct: 373 NRSEPVQVQGLS-----GVVAVSAGA--SSSLAIRS------DGTVWAWGSNASGQLGDG 419
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT LVP QV+ L V +V G + V + G VW WG L SL
Sbjct: 420 TTTDRLVPVQVQGLSGVVAVV---AGTSFSLAVRNDGTVWGWGYNGYGQLGTFTSLF--- 473
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ P+ ++G V VA G H++ V DG +W+ GR +G LG G
Sbjct: 474 ---VLVPVQVTG-------LSGVVAVAAGNLHSLAVRSDG-TVWALGRNDNGQLGDGSWT 522
Query: 354 DFFAPAIV 361
+ AP V
Sbjct: 523 NRSAPVQV 530
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 159 WGANNNGQ--LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
W A NNG LG G R++R P + ++ V GS H+ L + +
Sbjct: 8 WAAGNNGSGQLGDGTRDNRSTPVQVLGLSE-----VVAAAAGSIHSLALRN--------D 54
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W +G GQLG+G+ S P QV+ L VSVD G +H+ V G VW+WG
Sbjct: 55 GTVWAWGYNGYGQLGNGSLGSRAEPVQVQGLSGG---VSVDAGHYHSLAVRDDGTVWAWG 111
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
PN L + P+ + G + V V G++H++ + DG +
Sbjct: 112 DN------PNGQLGEGTTTRRLVPVQVQG-------LSEVVAVTAGSSHSLALRSDG-TV 157
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIVL 362
W+WG SG LG G T + P VL
Sbjct: 158 WAWGANASGQLGEGTTTNRLVPVPVL 183
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 83/303 (27%), Positives = 120/303 (39%), Gaps = 49/303 (16%)
Query: 56 APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
A L + + +N P+++ +V AG SLAI + G +W WG+ S G
Sbjct: 362 ASGQLGEGTTSNRSEPVQVQGLSGVVAVSAGASSSLAIRSDGTVWAWGSNA---SGQLGD 418
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ P V G VV V G+ +A+ D + WG N GQLG
Sbjct: 419 GTTTDRLVPVQVQGLSG--VVAVVAGTSFSLAVR--------NDGTVWGWGYNGYGQLGT 468
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
L P + + V V G+ H+ L R + W G +NGQ
Sbjct: 469 FTSLFVLVPVQVTGLS-----GVVAVAAGNLHS--LAVRS------DGTVWALGRNDNGQ 515
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG G+ + P QV L +VSV G H+ V G VW+WG G + S
Sbjct: 516 LGDGSWTNRSAPVQVTGLSG---VVSVAAGDSHSLAVRYDGSVWAWGYNS-FGQLGDGSW 571
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ A P+ ++G G VA + +++ V DG +W+WG G LG
Sbjct: 572 FQRSA-----PVQVTGLSGRG-------SVAASSDYSMAVRYDG-TVWAWGFNLYGQLGD 618
Query: 350 GKT 352
G T
Sbjct: 619 GTT 621
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 123/301 (40%), Gaps = 48/301 (15%)
Query: 56 APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
A L D + T+ P+++ +V AG SLA+ N G +W WG T
Sbjct: 412 ASGQLGDGTTTDRLVPVQVQGLSGVVAVVAGTSFSLAVRNDGTVWGWGYNGYGQLGT--- 468
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
F+ + P V G VV VA G+ H +A+ S D ++ G N+NGQLG
Sbjct: 469 FTSLFVLVPVQVTGLSG--VVAVAAGNLHSLAVRS--------DGTVWALGRNDNGQLGD 518
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G +R P + + V V G H+ + + + W +G GQ
Sbjct: 519 GSWTNRSAPVQVTGLS-----GVVSVAAGDSHSLAVRY--------DGSVWAWGYNSFGQ 565
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG G+ P QV L SV ++ V G VW+WG G + +
Sbjct: 566 LGDGSWFQRSAPVQVTGLSGRG---SVAASSDYSMAVRYDGTVWAWGFNL-YGQLGDGTT 621
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ N+ + P+ + + + V V G++H++ + DG +W+WG G LG
Sbjct: 622 SSNQ----LVPVQVQ-------QLRGVVAVEVGSSHSLALRSDG-TVWTWGYNSFGQLGN 669
Query: 350 G 350
G
Sbjct: 670 G 670
>gi|337749002|ref|YP_004643164.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
gi|336300191|gb|AEI43294.1| hypothetical protein KNP414_04764 [Paenibacillus mucilaginosus
KNP414]
Length = 388
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/311 (28%), Positives = 136/311 (43%), Gaps = 54/311 (17%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D +KT+ +PI + + AGG S A+ + G W WG+ L D +T
Sbjct: 62 LGDGTKTDRYSPIPVKNLDSVIGISAGGAASFAVRSDGTAWAWGSNLFGQLGDGTT---- 117
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP V H +VV + GS H +A+ + G ++WG N GQLG G
Sbjct: 118 --YDRLTPVQVQGLH--SVVALEAGSSHSLAVKADGS--------VWAWGWNTYGQLGDG 165
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+SR P ++ + +V V GS H+ + + W +G +GQL
Sbjct: 166 TTDSRSTPVQVQALD-----SVVAVAAGSGHSLAV--------KADGSVWAWGANWSGQL 212
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT + VP QV L +VSV G +S + S G VW+WG L +
Sbjct: 213 GDGTYTESTVPVQVTGLGS---VVSVSAGNTFSSALKSDGTVWAWGANDSGQLG-----S 264
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A ++ SP+ ++G ++ G+ +++ + +DG +W+WG SG LG G
Sbjct: 265 ETAASNSPSPVQVTG-------MASAAAISSGSDYSLALKNDG-TVWAWGYNSSGQLGNG 316
Query: 351 KTIDFFAPAIV 361
T AP V
Sbjct: 317 TTTSSSAPVQV 327
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 119/284 (41%), Gaps = 51/284 (17%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
K P++ + G SL + G +W WG N L D + ++P PV +
Sbjct: 29 KTPVEAAAGGTG--HSLFLQKDGTVWAWGANSNAQLGDGTK------TDRYSPIPVKNLD 80
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
+V+ ++ G A+ S D ++WG+N GQLG G RL P ++ +
Sbjct: 81 --SVIGISAGGAASFAVRS--------DGTAWAWGSNLFGQLGDGTTYDRLTPVQVQGLH 130
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+V + GS H+ + + W +G GQLG GTT S P QV+
Sbjct: 131 -----SVVALEAGSSHSLAV--------KADGSVWAWGWNTYGQLGDGTTDSRSTPVQVQ 177
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L +V+V G H+ V + G VW+WG + L ++ P+ ++G
Sbjct: 178 ALDS---VVAVAAGSGHSLAVKADGSVWAWGANW------SGQLGDGTYTESTVPVQVTG 228
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
G V V+ G + + DG +W+WG SG LG+
Sbjct: 229 LG-------SVVSVSAGNTFSSALKSDG-TVWAWGANDSGQLGS 264
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 90/223 (40%), Gaps = 34/223 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + P+++ +V AG SLA+ G++W WG S G +
Sbjct: 162 LGDGTTDSRSTPVQVQALDSVVAVAAGSGHSLAVKADGSVWAWGANW---SGQLGDGTYT 218
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V +VV V+ G+ AL S D ++WGAN++GQLG
Sbjct: 219 ESTVPVQVTGLG--SVVSVSAGNTFSSALKS--------DGTVWAWGANDSGQLG----- 263
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
ET +SP V S + W +G +GQLG+G
Sbjct: 264 -------SETAASNSPSPVQVTGMASAAAISSGSDYSLALKNDGTVWAWGYNSSGQLGNG 316
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
TT S+ P QV L +VSV G H V S G VW WG
Sbjct: 317 TTTSSSAPVQVTRLGS---VVSVAAGPLHGLAVQSGGTVWDWG 356
>gi|355715932|gb|AES05447.1| regulator of chromosome condensation and BTB domain containing
protein 2 [Mustela putorius furo]
Length = 344
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 120/250 (48%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 14 STIEPRRLESLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 65
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 66 NHGLVPCHIST--NLSNKQVTEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 115
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + L+P +V Q +V++ CG + V + G+V+ WG N L
Sbjct: 116 GSTANQLIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNG------NGQLGLG 169
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P I+ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 170 SSGNQPTPCRIA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 223
Query: 353 IDFFAPAIVL 362
+ PA V+
Sbjct: 224 SNQSYPAPVV 233
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H + L S GE + +WG NN+GQ+G G ++L P+ + Q+
Sbjct: 83 VTEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQLIPRRVTGCLQNK 134
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + + +G NGQLG G++ + P ++ L
Sbjct: 135 --VVVNIACGQMCSMAVVNTGE--------VYVWGYNGNGQLGLGSSGNQPTPCRIAAL- 183
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG G G N S +P+++
Sbjct: 184 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------APVVVE 235
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S L T
Sbjct: 236 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDDVFAC 288
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 289 FATPAVSWRLLSVE 302
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ N G +++WG + G L SS TP + G V
Sbjct: 136 VVNIACGQMCSMAVVNTGEVYVWG------YNGNGQLGLGSSGNQPTPCRIAALQGIRVQ 189
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 190 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 229
>gi|428181106|gb|EKX49971.1| hypothetical protein GUITHDRAFT_161991 [Guillardia theta CCMP2712]
Length = 658
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 90/310 (29%), Positives = 141/310 (45%), Gaps = 39/310 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A + I + G LA+D +G + WG +S G S S TPS + + V
Sbjct: 107 AGLSIKLITCGSDHVLALDASGKIRSWGRG---ESGQLGHASFSHSSTPSIIDELASQRV 163
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+VACG AL+ G+ Y+WG N GQLG GDR S P+++ + N
Sbjct: 164 KEVACGVAFSAALMEGGQ--------LYTWGCNRYGQLGQGDRTSSAIPRMLPSMNHRH- 214
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVKELP 248
V+ + CG+ H +LT + +T+G GQLGHG + L P+ V+ +
Sbjct: 215 --VHLMACGAAHIVVLTTSRD--------VYTWGNNSYGQLGHGFRKKHCLQPKSVRVM- 263
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + G H+ V++S GD+++WG G + + E+ D P L+S P
Sbjct: 264 SGLDIKQIVAGENHSCVMTSFGDIYTWG-RGDFGQLGHGDM---ESKDI--PTLLS---P 314
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA----PAIVLWP 364
PK Q + + GA + +T G ++SWGR G LG G + + P+ V+ P
Sbjct: 315 LDPKTQASL-IVSGADFIMAMTYSG-AVYSWGRNCFGQLGHGVDMHYSKSNRFPSDVISP 372
Query: 365 PLTEEFKQDE 374
+ F E
Sbjct: 373 KIISFFAASE 382
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 109/244 (44%), Gaps = 33/244 (13%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G FS +S P V G ++ + CGS+HV+AL ++G+ SWG +GQL
Sbjct: 90 GRFSTYNSQRPQEVVSLAGLSIKLITCGSDHVLALDASGK--------IRSWGRGESGQL 141
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G P II+ V EV CG +A L M +T+G
Sbjct: 142 GHASFSHSSTPSIIDELASQR---VKEVACGVAFSAAL--------MEGGQLYTWGCNRY 190
Query: 228 GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
GQLG G S+ +P + + ++V+L++ CG H V++++ DV++WG L
Sbjct: 191 GQLGQGDRTSSAIPRMLPSMNHRHVHLMA--CGAAHIVVLTTSRDVYTWGNNSYGQL--G 246
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
+ S ++SG D Q+ G H+ ++T G +++WGRG G
Sbjct: 247 HGFRKKHCLQPKSVRVMSG--------LDIKQIVAGENHSCVMTSFG-DIYTWGRGDFGQ 297
Query: 347 LGTG 350
LG G
Sbjct: 298 LGHG 301
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 8/119 (6%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ ++CGS HV+A+ +T ++WG +GQLGL R++ RP I + +
Sbjct: 388 SLSSISCGSHHVLAITEKKDT-------LFAWGRGEHGQLGLDPRDTSFRP-IPQEVKKM 439
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V C H+ ++ + +++G G GQLG+G+ + ++ E V++
Sbjct: 440 KGMIVLAAACSENHSVVVATMPGSGPKGDMKVFSWGRGSFGQLGYGSGKVPVMKETVQD 498
Score = 38.5 bits (88), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 60/152 (39%), Gaps = 21/152 (13%)
Query: 28 NCCMDGQLG------FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGG 81
NC GQLG +S SN VI + S E D+ I + S+ G
Sbjct: 346 NCF--GQLGHGVDMHYSKSNRFPSDVISPKIISFFAASEEHDA-------ISLSSISCGS 396
Query: 82 MMSLAI-DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVACGSEH 138
LAI + L+ WG + G +SF P P V G V+ AC H
Sbjct: 397 HHVLAITEKKDTLFAWGRG---EHGQLGLDPRDTSFRPIPQEVKKMKGMIVLAAACSENH 453
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
V + + + D+ +SWG + GQLG G
Sbjct: 454 SVVVATMPGSGPKGDMKVFSWGRGSFGQLGYG 485
>gi|242054133|ref|XP_002456212.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
gi|241928187|gb|EES01332.1| hypothetical protein SORBIDRAFT_03g032200 [Sorghum bicolor]
Length = 1056
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 133/292 (45%), Gaps = 36/292 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF----SLVSSFTPSPV-WDFHGHTVVK 131
+ G + AI +G L+ WG D S G + S + P V G V+
Sbjct: 314 ISCGEFHTCAISASGDLFNWG-----DGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLF 368
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H + S G Y++G G LG G+RES PK +E N +
Sbjct: 369 VACGSWHSALITSTGR--------LYTFGDGTFGALGHGNRESSAYPKEVEALNG---FR 417
Query: 192 VYEVTCGSFHTALLTHRKRPN--DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+V CG +H+A + +M+ +T+G G+ +LG G ++ L+P V+ L +
Sbjct: 418 TIKVACGVWHSAAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLE 477
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + + CG T ++++G V++ +G N L N D P L+ H
Sbjct: 478 HNFH-QLACGQNMTVALATSGHVYT------MGSSDNGQLG-NPKSDGKQPCLVKDKLAH 529
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +++CGAAH ++T ++++WG G +G LG G D AP IV
Sbjct: 530 ----ELVEEISCGAAHVAVLTSRS-EVYTWGMGANGRLGHGDLNDKKAPTIV 576
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 114/261 (43%), Gaps = 30/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ V G S I + G L+ +G+ G + SS P V +G +K
Sbjct: 364 LQVLFVACGSWHSALITSTGRLYTFGDGTF---GALGHGNRESSAYPKEVEALNGFRTIK 420
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V A G ++V Y+WG + +LG GD+E+RL P ++ + +
Sbjct: 421 VACGVWHSAAIVEA-TVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCVQALLEHN 479
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+++ CG T L +T G +NGQLG+ + P VK+
Sbjct: 480 ---FHQLACGQNMTVALA--------TSGHVYTMGSSDNGQLGNPKSDGKQ-PCLVKDKL 527
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG H +V++S +V++WGM N L + D +P ++
Sbjct: 528 AHELVEEISCGAAHVAVLTSRSEVYTWGM------GANGRLGHGDLNDKKAPTIVE---- 577
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + ++CG+ T +
Sbjct: 578 -ALKDRHVKSISCGSNFTTCI 597
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 87 IDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG + D T S V P P+ V ++ CGS H+
Sbjct: 213 IESLGDVYVWGEVWTDAAPSDGHTTSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHIALT 272
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E+ S V ++CG FHT
Sbjct: 273 TRQGEVF--------TWGEELGGRLGHGTDTDISRPKLVESI---SVTIVDFISCGEFHT 321
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
++ D+ W G G LG+ T S +P++V + + ++ V CG +H
Sbjct: 322 CAIS---ASGDLFN---WGDGSYHAGLLGYDTGASHWLPKRVSGPLEGLQVLFVACGSWH 375
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+++++S G ++++G + G + N A + + NG F+ ++VACG
Sbjct: 376 SALITSTGRLYTFG-DGTFGALGHG----NRESSAYPKEVEALNG-----FR-TIKVACG 424
Query: 323 AAHTVLVTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H+ + + KL++WG G LG G P V
Sbjct: 425 VWHSAAIVEATVQTGMNMVSKKLYTWGDGDKNRLGQGDKEARLIPTCV 472
>gi|108761023|ref|YP_629150.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108464903|gb|ABF90088.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 1466
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 95/315 (30%), Positives = 133/315 (42%), Gaps = 51/315 (16%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T +P+K I V+AG +LA+ G +W WG+ S G +
Sbjct: 241 LGDGTSTQRLSPVKVSELSGITEVRAGTYHALALGKDGGVWTWGSNA---SGQLGDGTWN 297
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V V VA +AL+ G ++WGAN +GQLG GD
Sbjct: 298 DRAVPMQVPGLE--RVKAVASMDSDSLALLDTG--------AVFAWGANGSGQLGDGDTT 347
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P + N AV V G+ H +L RK + W +G G +GQLGHG
Sbjct: 348 DRATPGPVPGLN-----AVASVVGGAQHALVL--RK------DGTLWAWGGGLSGQLGHG 394
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
++ +VP V L + S+ G FH+ G VW+WG L ++ R+
Sbjct: 395 GSERHVVPAPVMRL---AGVTSMATGSFHSLAALGDGSVWAWGRNTYGQLGDGSTAERHA 451
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
A + + G G VA A H++ V DG +W+WGR +G LG G T+
Sbjct: 452 A------VRVEGLG-------GVRSVASAAHHSLAVGMDG-TVWAWGRNAAGQLGDGTTL 497
Query: 354 DFFAPAIVLWPPLTE 368
D P V P LT
Sbjct: 498 DRARPVAV--PGLTS 510
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 121/289 (41%), Gaps = 44/289 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ AGG S+A+ G++W WG S G +L P+ V H V VA
Sbjct: 861 VVALAAGGDASVALRADGSVWSWGGNA---SGQLGDGTLTDRALPAHV--EHLSNAVAVA 915
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +A+ GED ++WGAN +GQLG G L P ++ + V
Sbjct: 916 VGETHALAV--------GEDGALWAWGANGSGQLGDGGTAPSLTPVRVKGLER-----VA 962
Query: 194 EVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V G +F A+ + W +G +GQLG GT + VP QV L
Sbjct: 963 SVAAGRAFSVAVRD---------DGTAWAWGTNPSGQLGDGTNHARSVPNQVTSLKG--- 1010
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ ++ G H +S+ G VW+WG + LG + S + + P + P+
Sbjct: 1011 IRAMSAGAHHVVALSADGTVWTWG-DNTLGQLGDGSSSPT----GMWPRQV-------PE 1058
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ VA G TV V DG +WG G LG GKT P V
Sbjct: 1059 LRGVEAVAAGEQFTVAVLLDGTAR-AWGSNEYGQLGDGKTGPQLTPMAV 1106
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 91/336 (27%), Positives = 124/336 (36%), Gaps = 72/336 (21%)
Query: 31 MDGQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+ GQLG GS +VP + + + S+ G SLA
Sbjct: 387 LSGQLGHGGSERHVVPAPVMRL--------------------AGVTSMATGSFHSLAALG 426
Query: 90 AGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV-ACGSEHVVALVSA 145
G++W WG L D ST H V+V G VA +
Sbjct: 427 DGSVWAWGRNTYGQLGDGSTA-----------------ERHAAVRVEGLGGVRSVASAAH 469
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
G D ++WG N GQLG G R RP + +V V G H L
Sbjct: 470 HSLAVGMDGTVWAWGRNAAGQLGDGTTLDRARPVAVPGLT-----SVTAVAAGGSHVLAL 524
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+ W +G GQLG GTT L P +V L +V+V G + +
Sbjct: 525 RS--------DGSVWAWGYNALGQLGDGTTVDRLTPVRVSGLGA---VVAVAAGSYFSMA 573
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
+ S G VW+WG L + R +SP+ + G + +VA G+AH
Sbjct: 574 LQSDGTVWTWGEGFEGQLGDGGGVQR------LSPVRVEG-------LANITRVAAGSAH 620
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ V DG +W+WG G LG G D F P V
Sbjct: 621 ALAVRGDG-TVWAWGDNGEGQLGDGSWADRFRPVQV 655
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 98/243 (40%), Gaps = 41/243 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+V V G H +AL G D ++WG N++GQLG G R P + +
Sbjct: 111 IVSVVSGDAHSLAL--------GADGSVWTWGGNSSGQLGDGTTTDRATPMRVAGLD--- 159
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V V G FH+ L + W +G +GQLG G TQ L PEQV P
Sbjct: 160 --SVVAVAAGDFHSLALRE--------DGTVWAWGTNFHGQLGRGHTQPGLTPEQV---P 206
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+V++ G T V G V +WG L S R +SP+ +S
Sbjct: 207 GLNGVVALAAGFDFTLAVLEDGTVRAWGSNGSGQLGDGTSTQR------LSPVKVS---- 256
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
+ +V G H + + DG +W+WG SG LG G D P V P E
Sbjct: 257 ---ELSGITEVRAGTYHALALGKDG-GVWTWGSNASGQLGDGTWNDRAVPMQV---PGLE 309
Query: 369 EFK 371
K
Sbjct: 310 RVK 312
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 92/224 (41%), Gaps = 42/224 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V VA G +H +AL D ++WGAN GQLG G R+ P ++E
Sbjct: 811 VRSVASGIQHSLALAC--------DGTVWAWGANARGQLGDGTTTPRVTPGLVEGLR--- 859
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + G + L + W++G +GQLG GT +P V+ L
Sbjct: 860 --GVVALAAGGDASVAL--------RADGSVWSWGGNASGQLGDGTLTDRALPAHVEHLS 909
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA--ISPILISGN 306
V+V G H V G +W+WG N S + G A ++P+ + G
Sbjct: 910 NA---VAVAVGETHALAVGEDGALWAWGA--------NGSGQLGDGGTAPSLTPVRVKG- 957
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ VA G A +V V DDG W+WG SG LG G
Sbjct: 958 ------LERVASVAAGRAFSVAVRDDGTA-WAWGTNPSGQLGDG 994
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 132/318 (41%), Gaps = 61/318 (19%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L D + T P+++ ++ +GG +LA+ + G++W WG L D + E
Sbjct: 1197 LGDGTSTPRTRPVQVAGLGDVVAIGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAE--- 1253
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P+ V G VV VA G + +AL S D +WG N +GQLG G
Sbjct: 1254 ---SRSLPTRVEGLEG--VVAVAGGDHYSLALHS--------DGTLSAWGNNASGQLGDG 1300
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+R ++ + V +V G+ HT L + WT+G GQL
Sbjct: 1301 TGTTRYSRVAVKGVDG-----VVDVRAGATHTVALRG--------DGTVWTWGDNAFGQL 1347
Query: 231 GHGT--TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPN 286
G G T+ LVP + +P + +V G HT V+ G VW+WG LGL N
Sbjct: 1348 GDGASGTRMRLVP---RPVPNLSSVSAVGAGARHTFAVALKGTVWTWGRNSHGQLGLGDN 1404
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
+ T P+ + + D V+ GA ++ + DG L SWG G
Sbjct: 1405 TNRTE--------PLRVR-------ELSDVTVVSGGADFSLAMKRDGTVL-SWGSSLYGS 1448
Query: 347 LGTGKTIDFFAPAIVLWP 364
LG G T +P V P
Sbjct: 1449 LGLGATGHRSSPGQVALP 1466
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 102/388 (26%), Positives = 137/388 (35%), Gaps = 99/388 (25%)
Query: 23 CYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPI------KICS 76
+ SL MDG + G N A L D + + P+ + +
Sbjct: 468 AHHSLAVGMDGTVWAWGRN--------------AAGQLGDGTTLDRARPVAVPGLTSVTA 513
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V AGG LA+ + G++W WG L G + V TP V VV VA GS
Sbjct: 514 VAAGGSHVLALRSDGSVWAWGYNAL---GQLGDGTTVDRLTPVRVSGLG--AVVAVAAGS 568
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
+AL S D ++WG GQLG G RL P +E + V
Sbjct: 569 YFSMALQS--------DGTVWTWGEGFEGQLGDGGGVQRLSPVRVEGLAN-----ITRVA 615
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
GS H L R + W +G GQLG G+ P QV P + +V
Sbjct: 616 AGSAHA--LAVRG------DGTVWAWGDNGEGQLGDGSWADRFRPVQV---PGLQGITAV 664
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG----------- 305
G H+ + G V +WG G G + +LT + P LI G
Sbjct: 665 SGGRSHSMALQGDGTVRAWGY-NGYGQLGDGTLTSR-----VRPALIPGLTGIQALHPSH 718
Query: 306 ------------NGPHGPKFQD-----------PVQV---------ACGAAHTVLVTDDG 333
G +F PVQV + G AHT++V DG
Sbjct: 719 LHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGRVDRLSVGRAHTLMVRADG 778
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +WG SG LG G + P V
Sbjct: 779 TVM-AWGENGSGQLGDGTSTHRTGPVSV 805
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/292 (27%), Positives = 119/292 (40%), Gaps = 43/292 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ SV AG S+A+ + G W WG P S G + + P+ V G + +
Sbjct: 960 RVASVAAGRAFSVAVRDDGTAWAWGTNP---SGQLGDGTNHARSVPNQVTSLKG--IRAM 1014
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWA 191
+ G+ HVVAL + D ++WG N GQLG G + + P+ +
Sbjct: 1015 SAGAHHVVALSA--------DGTVWTWGDNTLGQLGDGSSSPTGMWPRQVPELR-----G 1061
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQY 250
V V G T + +L+ +G E GQLG G T L P VK E P+
Sbjct: 1062 VEAVAAGEQFTVAV--------LLDGTARAWGSNEYGQLGDGKTGPQLTPMAVKIEGPKI 1113
Query: 251 VYLV-SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V +V H V S G V +WG + G + + TR P+ + G
Sbjct: 1114 RPPVRTVRAWGQHAVVQMSDGTVQTWG-DNTFGQLGDGTTTRRAV-----PLTVYG---- 1163
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V V+ GA H++ + DG +W+WG G LG G + P V
Sbjct: 1164 ---LASVVAVSSGAWHSLALLSDG-TVWAWGANGFGQLGDGTSTPRTRPVQV 1211
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 104/307 (33%), Gaps = 86/307 (28%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+VV V+ G+ H +AL+S D ++WGAN GQLG G R RP +
Sbjct: 1166 SVVAVSSGAWHSLALLS--------DGTVWAWGANGFGQLGDGTSTPRTRPVQVAGLGD- 1216
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V + G +H + + WT+G GQLG GT +S +P +V+ L
Sbjct: 1217 ----VVAIGSGGYHALAVCS--------DGSVWTWGYNAFGQLGDGTAESRSLPTRVEGL 1264
Query: 248 PQYVYLVSVD-----------------------------------------------CGL 260
V + D G
Sbjct: 1265 EGVVAVAGGDHYSLALHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVDGVVDVRAGA 1324
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
HT + G VW+WG L AS TR + P + P V
Sbjct: 1325 THTVALRGDGTVWTWGDNAFGQLGDGASGTRMR----LVPRPV-------PNLSSVSAVG 1373
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGL 380
GA HT V G +W+WGR G LG G + P V E + +GG
Sbjct: 1374 AGARHTFAVALKG-TVWTWGRNSHGQLGLGDNTNRTEPLRV------RELSDVTVVSGGA 1426
Query: 381 DDEIKTK 387
D + K
Sbjct: 1427 DFSLAMK 1433
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 80/209 (38%), Gaps = 30/209 (14%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D +WG N +GQLG G R P + V V G H+ L
Sbjct: 777 DGTVMAWGENGSGQLGDGTSTHRTGPVSVPGVP-----CVRSVASGIQHSLALA------ 825
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ W +G GQLG GTT + P V+ L V L G + + + G V
Sbjct: 826 --CDGTVWAWGANARGQLGDGTTTPRVTPGLVEGLRGVVALA---AGGDASVALRADGSV 880
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WSWG G + +LT D P H + V VA G H + V +D
Sbjct: 881 WSWGGNA-SGQLGDGTLT-----DRALPA-------HVEHLSNAVAVAVGETHALAVGED 927
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G LW+WG SG LG G T P V
Sbjct: 928 G-ALWAWGANGSGQLGDGGTAPSLTPVRV 955
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 126/357 (35%), Gaps = 97/357 (27%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D +P++ I V AG +LA+ G +W WG+ G S
Sbjct: 591 LGDGGGVQRLSPVRVEGLANITRVAAGSAHALAVRGDGTVWAWGDN---GEGQLGDGSWA 647
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET----YKG------------------ 151
F P V G + V+ G H +AL G Y G
Sbjct: 648 DRFRPVQVPGLQG--ITAVSGGRSHSMALQGDGTVRAWGYNGYGQLGDGTLTSRVRPALI 705
Query: 152 --------------------EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
D WG N GQLGLG P + +
Sbjct: 706 PGLTGIQALHPSHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSAVPVQVRGIGR----- 760
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQ 249
V ++ G HT ++ R + + M W GEN GQLG GT+ P V +P
Sbjct: 761 VDRLSVGRAHTLMV----RADGTV--MAW----GENGSGQLGDGTSTHRTGPVSVPGVP- 809
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA-----ISPILIS 304
+ SV G+ H+ ++ G VW+WG R + GD ++P L+
Sbjct: 810 --CVRSVASGIQHSLALACDGTVWAWGANA-----------RGQLGDGTTTPRVTPGLVE 856
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + V +A G +V + DG +WSWG SG LG G D PA V
Sbjct: 857 G-------LRGVVALAAGGDASVALRADG-SVWSWGGNASGQLGDGTLTDRALPAHV 905
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 101/255 (39%), Gaps = 45/255 (17%)
Query: 35 LGFSGSNSLVPCVIEQFLTIG--APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLA 86
+G G ++L C T G A L D + + P ++ +V G SLA
Sbjct: 1220 IGSGGYHALAVCSDGSVWTWGYNAFGQLGDGTAESRSLPTRVEGLEGVVAVAGGDHYSLA 1279
Query: 87 IDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+ + G L WGN L D + +S V+ VV V G+ H VAL
Sbjct: 1280 LHSDGTLSAWGNNASGQLGDGTGTTRYSRVAVKGVD--------GVVDVRAGATHTVALR 1331
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--PKIIETFNQDSPWAVYEVTCGSFH 201
D ++WG N GQLG G +R+R P+ + + +V V G+ H
Sbjct: 1332 G--------DGTVWTWGDNAFGQLGDGASGTRMRLVPRPVPNLS-----SVSAVGAGARH 1378
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T + L+ WT+G +GQLG G + P +V+EL V G
Sbjct: 1379 TFAVA--------LKGTVWTWGRNSHGQLGLGDNTNRTEPLRVRELSDVTV---VSGGAD 1427
Query: 262 HTSVVSSAGDVWSWG 276
+ + G V SWG
Sbjct: 1428 FSLAMKRDGTVLSWG 1442
>gi|442317911|ref|YP_007357932.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441485553|gb|AGC42248.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1451
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 129/313 (41%), Gaps = 59/313 (18%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + AP ++ +V AG +LA+ + G +W WG+ +SS + G
Sbjct: 231 LGDGTYIQRLAPTQVSQLQGVSAVTAGLYHALALRSDGTVWAWGS----NSSGQMGDGTW 286
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ PSPV V +A VA AG +D ++WG N+ GQLG+G
Sbjct: 287 TD-RPSPV------QVTSIA--RAKAVAAQDAGSLVLLDDGGVFAWGLNSQGQLGIGTTA 337
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P + AV + G+ H +L + WT+G G GQLGHG
Sbjct: 338 DSPLPVRVRGLG-----AVTSLAAGTQHAVVL--------RADGTLWTWGHGATGQLGHG 384
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+++ L PE V L + SV G FH+ S G VW+WG T +
Sbjct: 385 SSERMLSPEVVTRLSN---VASVASGSFHSVAALSDGSVWTWGRN-----------TNGQ 430
Query: 294 AGDAIS-----PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
GD + P+ + P V V+ H+ + DG +W WGR G +G
Sbjct: 431 LGDGTTTERHLPVRV-------PGLSGVVSVSASGHHSFALRSDG-TVWGWGRNAQGQMG 482
Query: 349 TGKTIDFFAPAIV 361
G T D +PA V
Sbjct: 483 DGTTKDRASPARV 495
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/309 (27%), Positives = 129/309 (41%), Gaps = 51/309 (16%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL- 112
+ D + T+ +P+++ S V A SL + + G ++ WG +++G +
Sbjct: 281 MGDGTWTDRPSPVQVTSIARAKAVAAQDAGSLVLLDDGGVFAWG------LNSQGQLGIG 334
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
++ +P PV V +A G++H V L + D ++WG GQLG G
Sbjct: 335 TTADSPLPVRVRGLGAVTSLAAGTQHAVVLRA--------DGTLWTWGHGATGQLGHGSS 386
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
E L P+++ + V V GSFH+ + + WT+G NGQLG
Sbjct: 387 ERMLSPEVVTRLSN-----VASVASGSFHSVAA--------LSDGSVWTWGRNTNGQLGD 433
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT +P +V P +VSV H+ + S G VW WG +
Sbjct: 434 GTTTERHLPVRV---PGLSGVVSVSASGHHSFALRSDGTVWGWGRNA------QGQMGDG 484
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
D SP + G +A G +H V + DG +W+WG +G LG G T
Sbjct: 485 TTKDRASPARVEG-------LSSVKALASGGSHMVALRTDG-TVWTWGYNGAGQLGDGTT 536
Query: 353 IDFFAPAIV 361
D AP V
Sbjct: 537 TDRRAPVQV 545
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 127/315 (40%), Gaps = 57/315 (18%)
Query: 56 APDSLEDDSKTNHKAPIKICSVKA------GGMMSLAIDNAGALWMWGN---CPLPDSST 106
A L D + + PI + + A +LA+ + G +W WG+ L D S
Sbjct: 1132 ADGQLGDGTTESRATPITVAGLGAMVAVAPAARHTLALRSDGTVWAWGDNTFGQLGDGS- 1190
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
++ PV V +A GS H +A+ ED ++WG N GQ
Sbjct: 1191 -------NTRRTLPVQVVGLEKVTAIAAGSYHSLAVR--------EDGTVWAWGYNVFGQ 1235
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG G ++R P + + V G +H+ +L + W G
Sbjct: 1236 LGDGTMDARAVPTRMLGLD-----GAVAVAGGEYHSLML--------RFDGTLWATGNNS 1282
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
+GQLG GT + L P QV EL Q + +V G +H+ + G VW+WG G G +
Sbjct: 1283 HGQLGEGTFTNRLSPFQVVELDQ---VRTVRAGGYHSVALREDGTVWTWG-HNGQGQLGD 1338
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
++T +P+ P V G +HT V G + W+WGR G
Sbjct: 1339 GTVTTRRV---PAPV---------PGLTAIASVGAGTSHTFAV---GSETWAWGRNSHGQ 1383
Query: 347 LGTGKTIDFFAPAIV 361
LGTG + D P +V
Sbjct: 1384 LGTGDSSDRLEPTLV 1398
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 112/286 (39%), Gaps = 44/286 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVKVACG 135
V AG SL + AG +W WG + S + G V SF G T V +A G
Sbjct: 53 VAAGAQHSLYVTQAGTVWAWGG----NGSGQLGTGSV-SFQRVVAQQVPGLTDVTSIAAG 107
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H +AL + D ++WG NN GQ+G G R P+ + + V V
Sbjct: 108 DAHSLALRA--------DRTVWTWGGNNAGQVGDGTNVDRPTPQKVPGLSD-----VVAV 154
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
G FH+ L + W +G GQLG G +Q P QV L V L
Sbjct: 155 AAGEFHSLAL--------RADGTVWAWGSNFYGQLGRGHSQPGPSPAQVVGLTGVVALA- 205
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
G + V S G VW+WG L + R ++P +S + Q
Sbjct: 206 --AGFDFSLAVRSDGTVWAWGANGSGQLGDGTYIQR------LAPTQVS-------QLQG 250
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V G H + + DG +W+WG SG +G G D +P V
Sbjct: 251 VSAVTAGLYHALALRSDG-TVWAWGSNSSGQMGDGTWTDRPSPVQV 295
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/206 (31%), Positives = 88/206 (42%), Gaps = 30/206 (14%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D +SWG N+ GQLG G SR P +E W V V G + +L
Sbjct: 817 DGTVWSWGGNSQGQLGDGGVTSRAYPAKVEGL-----WGVVAVLAGGDSSMVL------- 864
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ WT+G +GQLG GT P +VK L V G H VVS G V
Sbjct: 865 -RADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGV---MGEAHALVVSQDGTV 920
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+WG G G + + T + SP+ ++G + V+ G A+++ V D
Sbjct: 921 WAWG-ANGRGQLGDGTTTSSA-----SPVRVAG-------LSAAMNVSVGQAYSLAVLPD 967
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAP 358
G +WSWG SG LG G + P
Sbjct: 968 G-TVWSWGANDSGQLGDGTNVARTTP 992
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 135/351 (38%), Gaps = 89/351 (25%)
Query: 60 LEDDSKTNHKAPIKICSVKA------GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T+ +P+++ + A G SLA+ G +W WG DS G + V
Sbjct: 931 LGDGTTTSSASPVRVAGLSAAMNVSVGQAYSLAVLPDGTVWSWGAN---DSGQLGDGTNV 987
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ TP PV D V V G+ HVVA+ D + WGAN GQ+G G
Sbjct: 988 ARTTPKPVQDLA--DVKAVTAGAHHVVAVR--------HDGTVWGWGANAFGQVGDGTHF 1037
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHT-ALLT-------------------------- 206
R RP +E E + G H+ ALL
Sbjct: 1038 WRFRPVRVEGLLN-----AVETSAGEQHSLALLGDERALSWGSHEYGQLGDAESGPSLEP 1092
Query: 207 --------------------HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
H+ + + T+G +GQLG GTT+S P V
Sbjct: 1093 VGVKLPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQLGDGTTESRATPITVAG 1152
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L +V+V HT + S G VW+WG + G + S TR P+ + G
Sbjct: 1153 LGA---MVAVAPAARHTLALRSDGTVWAWG-DNTFGQLGDGSNTRRTL-----PVQVVG- 1202
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+ +A G+ H++ V +DG +W+WG G LG G T+D A
Sbjct: 1203 ------LEKVTAIAAGSYHSLAVREDG-TVWAWGYNVFGQLGDG-TMDARA 1245
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 117/291 (40%), Gaps = 49/291 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ S+ AG ++ + G LW WG+ L S+E +P V V
Sbjct: 351 VTSLAAGTQHAVVLRADGTLWTWGHGATGQLGHGSSE------RMLSPEVVTRLS--NVA 402
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA GS H VA +S G ++WG N NGQLG G R P + +
Sbjct: 403 SVASGSFHSVAALSDGS--------VWTWGRNTNGQLGDGTTTERHLPVRVPGLS----- 449
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V+ H+ L + W +G GQ+G GTT+ P +V+ L
Sbjct: 450 GVVSVSASGHHSFALRS--------DGTVWGWGRNAQGQMGDGTTKDRASPARVEGLSSV 501
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
L S G H + + G VW+WG G G + + T D +P+ ++G
Sbjct: 502 KALAS---GGSHMVALRTDGTVWTWGY-NGAGQLGDGTTT-----DRRAPVQVTG----- 547
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA GA ++ + DG +W+WG G G LG G + +P V
Sbjct: 548 --LSGVTSVAAGAYFSLALRTDG-TVWAWGDGFEGQLGDGAGVQRASPVQV 595
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 117/287 (40%), Gaps = 49/287 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+ SV +G S+A + G++W WG N L D +T P V G V
Sbjct: 400 NVASVASGSFHSVAALSDGSVWTWGRNTNGQLGDGTT------TERHLPVRVPGLSG--V 451
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V V+ H AL S D + WG N GQ+G G + R P +E +
Sbjct: 452 VSVSASGHHSFALRS--------DGTVWGWGRNAQGQMGDGTTKDRASPARVEGLS---- 499
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+V + G H L + WT+G GQLG GTT P QV L
Sbjct: 500 -SVKALASGGSHMVAL--------RTDGTVWTWGYNGAGQLGDGTTTDRRAPVQVTGLSG 550
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ SV G + + + + G VW+WG L A + R SP+ ++G
Sbjct: 551 ---VTSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQR------ASPVQVTG---- 597
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
V++A GAAH + V DDG +W+WG G +G G D F
Sbjct: 598 ---LTRVVKLAAGAAHGLAVRDDG-TVWAWGDNTEGQMGDGSWSDRF 640
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 96/380 (25%), Positives = 146/380 (38%), Gaps = 92/380 (24%)
Query: 39 GSNSLVPCVIEQFLTIGAPDS--LEDDSKTNHKAPIKICSVK--AGGMM----SLAIDNA 90
G +S+V T GA S L D + + +P+++ + A G+M +L +
Sbjct: 858 GDSSMVLRADGTVWTWGANGSGQLGDGTLGDRASPLEVKGLAGIATGVMGEAHALVVSQD 917
Query: 91 GALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G +W WG L D +T SS +P V + V+ G + +A++
Sbjct: 918 GTVWAWGANGRGQLGDGTT------TSSASPVRVAGLS--AAMNVSVGQAYSLAVL---- 965
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
D +SWGAN++GQLG G +R PK ++ V VT G+ H + H
Sbjct: 966 ----PDGTVWSWGANDSGQLGDGTNVARTTPKPVQDLAD-----VKAVTAGAHHVVAVRH 1016
Query: 208 ----------------------RKRP---NDMLESM-----------------CWTFGLG 225
R RP +L ++ ++G
Sbjct: 1017 DGTVWGWGANAFGQVGDGTHFWRFRPVRVEGLLNAVETSAGEQHSLALLGDERALSWGSH 1076
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYL---VSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
E GQLG + +L P VK LP L VSV H + + + G V +WG
Sbjct: 1077 EYGQLGDAESGPSLEPVGVK-LPSSKVLVPAVSVSAWHQHAAALLADGTVQTWGGNADGQ 1135
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
L + +R +PI ++G G V VA A HT+ + DG +W+WG
Sbjct: 1136 LGDGTTESR------ATPITVAGLGAM-------VAVAPAARHTLALRSDG-TVWAWGDN 1181
Query: 343 RSGVLGTGKTIDFFAPAIVL 362
G LG G P V+
Sbjct: 1182 TFGQLGDGSNTRRTLPVQVV 1201
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 112/312 (35%), Gaps = 57/312 (18%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T+ +AP+++ SV AG SLA+ G +W WG+ G
Sbjct: 531 LGDGTTTDRRAPVQVTGLSGVTSVAAGAYFSLALRTDGTVWAWGDGFEGQLGDGAGVQRA 590
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S PV G T V V +D ++WG N GQ+G G
Sbjct: 591 S-----PV-QVTGLTRVVKLAAGAAHGLAVR-------DDGTVWAWGDNTEGQMGDGSWS 637
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R R + V V G +H+ L + +G GQ G G
Sbjct: 638 DRFRAVQVYGLT-----GVSSVVGGLYHSMALAQ--------DGTLRAWGGNAYGQFGDG 684
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+V V L L H V G + +WG + GLG +SL
Sbjct: 685 GVTPRVVAGAVPGLSGIKLL---GASYLHVLAVREDGMLLTWGYNRFGQLGLGAAGWSSL 741
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
P+ + G G +++ G AH++LV DG L +WG+ SG LG
Sbjct: 742 ----------PVQVRGLG-------QGRRLSAGRAHSLLVRADGTVL-AWGQNTSGQLGD 783
Query: 350 GKTIDFFAPAIV 361
G T +P +
Sbjct: 784 GSTTHRASPVLA 795
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKIC------SV 77
Y SL DG L +G+NS L + + TN +P ++ +V
Sbjct: 1264 YHSLMLRFDGTLWATGNNS--------------HGQLGEGTFTNRLSPFQVVELDQVRTV 1309
Query: 78 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 137
+AGG S+A+ G +W WG+ G ++ + P+PV + V G+
Sbjct: 1310 RAGGYHSVALREDGTVWTWGHN---GQGQLGDGTVTTRRVPAPVPGLT--AIASVGAGTS 1364
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
H A+ S ET+ +WG N++GQLG GD RL P +++ +
Sbjct: 1365 HTFAVGS--ETW--------AWGRNSHGQLGTGDSSDRLEPTLVKGLH 1402
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 94/247 (38%), Gaps = 54/247 (21%)
Query: 152 EDLVCYSWGANNNGQLGL-----------------GDRESRLRPKIIETFNQDSPWAVYE 194
ED + +WG N GQLGL G R S R + + A +
Sbjct: 716 EDGMLLTWGYNRFGQLGLGAAGWSSLPVQVRGLGQGRRLSAGRAHSLLVRADGTVLAWGQ 775
Query: 195 VTCGSFHTALLTHRKRP-----------------NDML---ESMCWTFGLGENGQLGHGT 234
T G THR P + ++ + W++G GQLG G
Sbjct: 776 NTSGQLGDGSTTHRASPVLARNLPCARAASAGRQHSLVLACDGTVWSWGGNSQGQLGDGG 835
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
S P +V+ L +V+V G + V+ + G VW+WG G G + +L
Sbjct: 836 VTSRAYPAKVEGL---WGVVAVLAGGDSSMVLRADGTVWTWG-ANGSGQLGDGTL----- 886
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
GD SP+ + G G AH ++V+ DG +W+WG G LG G T
Sbjct: 887 GDRASPLEVKG-------LAGIATGVMGEAHALVVSQDG-TVWAWGANGRGQLGDGTTTS 938
Query: 355 FFAPAIV 361
+P V
Sbjct: 939 SASPVRV 945
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 47/119 (39%), Gaps = 23/119 (19%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V G H VAL ED ++WG N GQLG G +R P +
Sbjct: 1306 VRTVRAGGYHSVALR--------EDGTVWTWGHNGQGQLGDGTVTTRRVPAPVPGLT--- 1354
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
A+ V G+ HT + S W +G +GQLG G + L P VK L
Sbjct: 1355 --AIASVGAGTSHTF----------AVGSETWAWGRNSHGQLGTGDSSDRLEPTLVKGL 1401
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 71/172 (41%), Gaps = 24/172 (13%)
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A +V G+ H+ +T W +G +GQLG G+ V Q ++P
Sbjct: 49 ATSKVAAGAQHSLYVTQ--------AGTVWAWGGNGSGQLGTGSVSFQRVVAQ--QVPGL 98
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ S+ G H+ + + VW+WG + ++ R +P +
Sbjct: 99 TDVTSIAAGDAHSLALRADRTVWTWGGNNAGQVGDGTNVDRP------TPQKV------- 145
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
P D V VA G H++ + DG +W+WG G LG G + +PA V+
Sbjct: 146 PGLSDVVAVAAGEFHSLALRADG-TVWAWGSNFYGQLGRGHSQPGPSPAQVV 196
>gi|410947368|ref|XP_003980421.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Felis catus]
Length = 551
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLMPCHIST--NLSNKQVTEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V + G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P IS G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRIS--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ PA V+
Sbjct: 295 SNQSYPAPVV 304
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VTEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + + +G NGQLG G++ + P ++ L
Sbjct: 206 --VVVNIACGQMCSMAVVNTGE--------VYVWGYNGNGQLGLGSSGNQPTPCRISAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------APVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHLAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVSWRLLSVE 373
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ N G +++WG + G L SS TP + G V
Sbjct: 207 VVNIACGQMCSMAVVNTGEVYVWG------YNGNGQLGLGSSGNQPTPCRISALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 300
>gi|391344583|ref|XP_003746575.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Metaseiulus occidentalis]
Length = 1152
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/267 (29%), Positives = 122/267 (45%), Gaps = 44/267 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I++ + G +L + + G + G+ E VS+ P PV +V+
Sbjct: 51 IRVRQIATGAHHTLVLTSHGRVLSCGSNDHDQLGQE-----VSTTKPEPVTALQCLRIVQ 105
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPW 190
V CG +H +AL AG+ Y WG+N+ GQLG G+ +ESRL P+ ++T +P+
Sbjct: 106 VCCGQQHSMALTEAGQVYM--------WGSNSKGQLGNGEGQESRLSPRFVKTL---APF 154
Query: 191 AVYEVTCGSFH-TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELP 248
V ++ CGS H ALL + + +G NGQLG GT + VP +V L
Sbjct: 155 TVVQIACGSNHCLALLNN---------GALYAWGDNGNGQLGIGTVGEPQRVPVEVTNLL 205
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ L + CG H+ V+S +G ++ WG + LGL N D P L+
Sbjct: 206 G-LPLSQIACGANHSMVLSKSGVIFVWGSNRFGQLGLSDNK--------DRAFPTLLKTL 256
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDG 333
KF +A G AH+ +T G
Sbjct: 257 RQQHVKF-----IAAGGAHSAALTAHG 278
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 100/243 (41%), Gaps = 51/243 (20%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS--SFTPSPVWDFHGH 127
AP + + G LA+ N GAL+ WG+ + + + G V P V + G
Sbjct: 152 APFTVVQIACGSNHCLALLNNGALYAWGD----NGNGQLGIGTVGEPQRVPVEVTNLLGL 207
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ ++ACG+ H + L +G V + WG+N GQLGL D + R P +++T Q
Sbjct: 208 PLSQIACGANHSMVLSKSG--------VIFVWGSNRFGQLGLSDNKDRAFPTLLKTLRQQ 259
Query: 188 SPWAVYEVTCGSFHTALLT---------------HRKR---------PNDMLESMCWTF- 222
V + G H+A LT H R P L ++
Sbjct: 260 H---VKFIAAGGAHSAALTAHGGVFTFGWSFYESHEVRISLRGTESNPQSALARKLFSLI 316
Query: 223 -------GLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-SAGDVWS 274
G GQLGHG+ L P +++EL + + G HT + + G V++
Sbjct: 317 EREFCRHSYGSYGQLGHGSKNDQLTPMKIQEL-MGTTITQIALGRCHTVCYAPTVGKVFT 375
Query: 275 WGM 277
+G+
Sbjct: 376 FGL 378
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 89/193 (46%), Gaps = 25/193 (12%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
+G N+G+LGLG E + ++ + Q V ++ G+ HT +LT R
Sbjct: 21 FGNTNSGELGLGGIEDHI-VRVPRSIPQLEGIRVRQIATGAHHTLVLTSHGR-------- 71
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ G ++ QLG + + PE V L Q + +V V CG H+ ++ AG V+ WG
Sbjct: 72 VLSCGSNDHDQLGQEVSTTK--PEPVTAL-QCLRIVQVCCGQQHSMALTEAGQVYMWGSN 128
Query: 279 KGLGLCPNASLTRNEAGDA-ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
L E ++ +SP + P VQ+ACG+ H + + ++G L+
Sbjct: 129 S------KGQLGNGEGQESRLSPRFVKTLAPF-----TVVQIACGSNHCLALLNNG-ALY 176
Query: 338 SWGRGRSGVLGTG 350
+WG +G LG G
Sbjct: 177 AWGDNGNGQLGIG 189
>gi|330836304|ref|YP_004410945.1| hypothetical protein [Sphaerochaeta coccoides DSM 17374]
gi|329748207|gb|AEC01563.1| Listeria/Bacterioides repeat-containing protein [Sphaerochaeta
coccoides DSM 17374]
Length = 786
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 133/317 (41%), Gaps = 52/317 (16%)
Query: 65 KTNHKAPIKICS-------VKAGGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSL 112
T+ P+++ S V AG ++ + G LW +G L DS S
Sbjct: 449 NTDRSTPVQVSSMGSDVAAVSAGEKHTMILKKDGTLWATGENKYGQLGLGDSD-----SG 503
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ TP V G V V+ G+ H + L G ++ G NN+GQLGLGD
Sbjct: 504 IDKSTPMQVSSM-GSDVAAVSTGASHTMILKKNG--------TLWATGQNNDGQLGLGDS 554
Query: 173 ES---RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
S R P + D V V+ GS+HT +L + W G +GQ
Sbjct: 555 SSGTDRSTPVQVLAMGSD----VEAVSAGSYHTMILKK--------DGTLWATGRNYDGQ 602
Query: 230 LGHGTTQSALVPEQVKELPQY----VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
LG GTT S P QVK P + + +V G FHT ++ G +W G + L
Sbjct: 603 LGDGTTTSRTTPVQVKASPTFGDFMTNVKAVSAGGFHTMILKKDGTLWVTGRNQYGQLGD 662
Query: 286 NAS-LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
S +T N++ +P+ + + G D V V+ G +T+++ DG LW+ GR
Sbjct: 663 GTSGITNNKS----TPVQVRDSSGVG-FMTDVVAVSAGLHYTIILKKDG-TLWATGRNNF 716
Query: 345 GVLGTGKTIDFFAPAIV 361
G LG G D P V
Sbjct: 717 GQLGVGNKTDRKTPVKV 733
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 127/307 (41%), Gaps = 47/307 (15%)
Query: 94 WMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVK----VACGSEHVVALVSAGET 148
+ +G LPD + ++ SFT P+ + +VK V+ G H + L + G
Sbjct: 375 YFYGWNTLPDGNGSH-YAASESFTMPADDVTLYAQWLVKGIKSVSAGYYHTMILKTDG-- 431
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
++ G N GQLG+GD R P + + D V V+ G HT +L
Sbjct: 432 ------TLWATGENKAGQLGVGDNTDRSTPVQVSSMGSD----VAAVSAGEKHTMILKK- 480
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSAL---VPEQVKELPQYVYLVSVDCGLFHTSV 265
+ W G + GQLG G + S + P QV + V VS G HT +
Sbjct: 481 -------DGTLWATGENKYGQLGLGDSDSGIDKSTPMQVSSMGSDVAAVS--TGASHTMI 531
Query: 266 VSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ G +W+ G LGL ++S T D +P+ + G D V+ G+
Sbjct: 532 LKKNGTLWATGQNNDGQLGLGDSSSGT-----DRSTPVQVLAMG------SDVEAVSAGS 580
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQD--ELNTGGLD 381
HT+++ DG LW+ GR G LG G T P V P +F + ++ GG
Sbjct: 581 YHTMILKKDG-TLWATGRNYDGQLGDGTTTSRTTPVQVKASPTFGDFMTNVKAVSAGGFH 639
Query: 382 DEIKTKD 388
I KD
Sbjct: 640 TMILKKD 646
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 90/221 (40%), Gaps = 44/221 (19%)
Query: 32 DGQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DGQLG + S P ++ T G D TN KA V AGG ++ +
Sbjct: 600 DGQLGDGTTTSRTTPVQVKASPTFG-------DFMTNVKA------VSAGGFHTMILKKD 646
Query: 91 GALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHG----HTVVKVACGSEHVVALV 143
G LW+ G L D ++ G + S TP V D G VV V+ G + + L
Sbjct: 647 GTLWVTGRNQYGQLGDGTS--GITNNKS-TPVQVRDSSGVGFMTDVVAVSAGLHYTIIL- 702
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+D ++ G NN GQLG+G++ R P + D V V+ G HT
Sbjct: 703 -------KKDGTLWATGRNNFGQLGVGNKTDRKTPVKVAFMGTD----VAAVSAGYNHT- 750
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
L +K + W G NGQLG + PEQV
Sbjct: 751 -LIQKK------DGSLWATGFNTNGQLGVSDNTNRSTPEQV 784
>gi|350396381|ref|XP_003484535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
impatiens]
Length = 1088
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 132/299 (44%), Gaps = 54/299 (18%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKV 132
V G ++A++ G L+ WG S++EG L S +P V +V+V
Sbjct: 121 VACGAYHTIAVNEWGQLFSWG------SNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQV 174
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWA 191
ACG +H +AL + GE YSWG+N+ GQLGLG D S ++PK+I T P A
Sbjct: 175 ACGMKHALALTNNGE--------LYSWGSNSEGQLGLGVDIRSEVKPKLINTL-AGVPIA 225
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQ 249
+ CG +H+ ++ FG G+N GQLG TQ+ +P Q++ L +
Sbjct: 226 F--IACGGYHSIAISKSGA----------IFGWGKNTFGQLGLNDTQNRNLPHQLQTL-R 272
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 305
+ CG + ++ G V++ G + G G N L R S +
Sbjct: 273 NAKICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTV---- 328
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG HT+ + ++++WG G +G LG T P +V P
Sbjct: 329 -----------TQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSIPTPQVVHGP 376
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 99/208 (47%), Gaps = 33/208 (15%)
Query: 150 KGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
K D+ C WG +G+LGLG + E L P ++ F + S + ++ CG +T ++TH
Sbjct: 29 KKGDMFC--WGNTRHGELGLGGIEDEIILVPCQVD-FKKAS--EIQQIACGENYTVVITH 83
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ ++ G + GQLGH + L + + L +V+ V CG +HT V+
Sbjct: 84 --------DGKIYSCGNNDYGQLGHERGRKRL--QLILGLDAFVF-KKVACGAYHTIAVN 132
Query: 268 SAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G ++SWG E LGL + SP ++ G VQVACG H
Sbjct: 133 EWGQLFSWGSNSEGQLGLNSKNFM-------ECSPRMVKTLGT-----SIIVQVACGMKH 180
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ +T++G +L+SWG G LG G I
Sbjct: 181 ALALTNNG-ELYSWGSNSEGQLGLGVDI 207
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 36/218 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNA 90
+G+L GSNS E L +G E K N A + I + GG S+AI +
Sbjct: 187 NGELYSWGSNS------EGQLGLGVDIRSEVKPKLINTLAGVPIAFIACGGYHSIAISKS 240
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
GA++ WG +T G L + P + + ACG E V L G
Sbjct: 241 GAIFGWG------KNTFGQLGLNDTQNRNLPHQLQTLRNAKICYAACGEEFSVFLTVDGG 294
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT-ALLT 206
++ GA GQLG G + + P+ + + V +++CG HT AL+
Sbjct: 295 V--------FTCGAGMYGQLGHGSNNNEILPRQVMELMGST---VTQISCGKRHTLALVP 343
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ R + +GLG GQLG+ +T+S P+ V
Sbjct: 344 SQGR--------VYAWGLGGAGQLGNNSTRSIPTPQVV 373
>gi|325180681|emb|CCA15086.1| RCC1 and BTB domaincontaining protein putative [Albugo laibachii
Nc14]
Length = 554
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 115/277 (41%), Gaps = 35/277 (12%)
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSA 145
AI +GAL+ +G G S TP+ + D + VV+VAC H + +
Sbjct: 112 AISRSGALYTFG---FNSRGQLGHGSTNPITTPTKIKDLASYHVVEVACSYFHTIVMTME 168
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
G Y++G N+ GQLG+ D R P + FN V V CG HT +
Sbjct: 169 G--------TLYAFGRNDLGQLGIDDGMDRHVPVPLTYFNS---RPVLAVACGQHHTVV- 216
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV-SVDCGLFHTS 264
+ FG ++GQLG G T + P +V S+ CG +HT
Sbjct: 217 -------SLTNGGVVAFGKNDHGQLGTGYTLDYHASPSLLAAPLDSLVVPSLACGYYHTI 269
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
++ G V+S+G L P LI VQV CG
Sbjct: 270 ALAEHGSVYSFGRND------YGQLGHGHRHHLSEPTLIKALAK-----THAVQVTCGCY 318
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+++++DG K++ +GR G LG G ID +P I+
Sbjct: 319 HTLVLSEDG-KVYPFGRNNHGQLGLGNLIDCTSPQII 354
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 116/254 (45%), Gaps = 40/254 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD----RE 173
P+P+ H ++ VACG+E L G+ + + G N++GQ G+G +
Sbjct: 35 PTPISFCHNVKILDVACGNEQTAFLFETGDVF--------TCGYNDSGQCGIGSTSRVQS 86
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P ++ A G H LT R + +TFG GQLGHG
Sbjct: 87 LRLVPALVT-----EDIAHIRSANGCEH---LTAISRSGAL-----YTFGFNSRGQLGHG 133
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T P ++K+L Y ++V V C FHT V++ G ++++G LG L ++
Sbjct: 134 STNPITTPTKIKDLASY-HVVEVACSYFHTIVMTMEGTLYAFG-RNDLG-----QLGIDD 186
Query: 294 AGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
D P+ P PV VACG HTV+ +G + ++G+ G LGTG T
Sbjct: 187 GMDRHVPV------PLTYFNSRPVLAVACGQHHTVVSLTNG-GVVAFGKNDHGQLGTGYT 239
Query: 353 IDFFAPAIVLWPPL 366
+D+ A +L PL
Sbjct: 240 LDYHASPSLLAAPL 253
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 69/159 (43%), Gaps = 20/159 (12%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V +ACG H +AL G Y S+G N+ GQLG G R P +I+ +
Sbjct: 257 VVPSLACGYYHTIALAEHGSVY--------SFGRNDYGQLGHGHRHHLSEPTLIKALAKT 308
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+VTCG +HT +L+ + + FG +GQLG G P+ + L
Sbjct: 309 HAV---QVTCGCYHTLVLSE--------DGKVYPFGRNNHGQLGLGNLIDCTSPQIIASL 357
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
++V V G +H+ +++ + M+ LC +
Sbjct: 358 RDK-FVVKVASGFYHSICLTATKNSVGSRMDTSHTLCQD 395
>gi|114321834|ref|YP_743517.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228228|gb|ABI58027.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 821
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 95/309 (30%), Positives = 132/309 (42%), Gaps = 60/309 (19%)
Query: 62 DDSKTNHK--APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-P 118
DD KT + + +V AG +LA+ + G LW WG ++ G L +
Sbjct: 561 DDRKTPERVGSDSDWATVSAGTGYTLAVKDDGTLWAWGR------NSHGQLGLGDTNNRD 614
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+PV + V+ GS H +A+ + G ++WG N++GQLGLGD ++R P
Sbjct: 615 APVQVASDNDWAAVSAGSRHTLAVKNDG--------TLWAWGRNSDGQLGLGDTDNRDVP 666
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
E D+ WA V+ GS HT + + W +G +GQLG G T
Sbjct: 667 ---EQVGSDTDWAA--VSTGSGHTLAV--------KTDGTLWAWGRNSDGQLGLGDTDER 713
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME--KGLGLCPNASLTRNEAGD 296
PEQV + +V G HT + + G +W WG+ LGL GD
Sbjct: 714 HAPEQVGGDSDWA---AVTAGWQHTLAIKNDGTLWGWGLNLYGQLGL-----------GD 759
Query: 297 AISPILISGNGPHGP----KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G H P D VA G HT+ V DDG L +WGR R G LG +T
Sbjct: 760 T--------DGRHAPMQVGSDSDWATVAAGRYHTLAVKDDG-TLRAWGRNRFGQLGQ-RT 809
Query: 353 IDFFAPAIV 361
F P V
Sbjct: 810 YRFDQPQEV 818
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 131/311 (42%), Gaps = 62/311 (19%)
Query: 63 DSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLV 113
D+ H AP+++ S+ G +LA+ G LW WG N L T+
Sbjct: 509 DTDDRH-APVQVGGDSDWTSLSVGREHTLAVKADGTLWGWGQNYNGQLGLGDTD------ 561
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLG 170
TP V GS+ A VSAG Y +D ++WG N++GQLGLG
Sbjct: 562 DRKTPERV-------------GSDSDWATVSAGTGYTLAVKDDGTLWAWGRNSHGQLGLG 608
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
D +R P + + D+ WA V+ GS HT + + + W +G +GQL
Sbjct: 609 DTNNRDAPVQVAS---DNDWAA--VSAGSRHTLAVKN--------DGTLWAWGRNSDGQL 655
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G G T + VPEQV + +V G HT V + G +W+WG + L
Sbjct: 656 GLGDTDNRDVPEQVGSDTDWA---AVSTGSGHTLAVKTDGTLWAWGRNS------DGQLG 706
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + +P + G+ D V G HT+ + +DG LW WG G LG G
Sbjct: 707 LGDTDERHAPEQVGGD-------SDWAAVTAGWQHTLAIKNDG-TLWGWGLNLYGQLGLG 758
Query: 351 KTIDFFAPAIV 361
T AP V
Sbjct: 759 DTDGRHAPMQV 769
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/342 (27%), Positives = 135/342 (39%), Gaps = 59/342 (17%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
Y +L DG L G N + + I +P L+ ++ + A AG
Sbjct: 433 YHTLGVKADGTLRAWGRNDFGELGLGVMVYITSP--LQTVTEADWAA------ASAGQYQ 484
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+ A+ G+LW WG + S + G +PV ++ G EH +A+
Sbjct: 485 TQAVKADGSLWGWGR----NHSGQLGLGDTDD-RHAPVQVGGDSDWTSLSVGREHTLAVK 539
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G + WG N NGQLGLGD + R P E DS WA V+ G+ +T
Sbjct: 540 ADG--------TLWGWGQNYNGQLGLGDTDDRKTP---ERVGSDSDWAT--VSAGTGYTL 586
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+ + W +G +GQLG G T + P QV + +V G HT
Sbjct: 587 AVKD--------DGTLWAWGRNSHGQLGLGDTNNRDAPVQVASDNDW---AAVSAGSRHT 635
Query: 264 SVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
V + G +W+WG GLG N + D D V
Sbjct: 636 LAVKNDGTLWAWGRNSDGQLGLGDTDNRDVPEQVGSDT-----------------DWAAV 678
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G+ HT+ V DG LW+WGR G LG G T + AP V
Sbjct: 679 STGSGHTLAVKTDG-TLWAWGRNSDGQLGLGDTDERHAPEQV 719
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 97/358 (27%), Positives = 142/358 (39%), Gaps = 72/358 (20%)
Query: 16 CFFMPFICYTSLNCCM---DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPI 72
C P + ++ DG L G N++ +G D+ + D+ +
Sbjct: 122 CTAFPVLAAGGVHTLAMKADGTLWAWGQNNVGQ--------LGLGDTEKRDTPAQVGSDT 173
Query: 73 KICSVKAGGMMSLAIDNAGALWMW-----GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
+V AGG +LA+ + G LW W G L D+ V S +
Sbjct: 174 DWAAVSAGGAYTLAVKDDGTLWAWGENYFGQLGLGDTDDRHAPEQVGSDSD--------- 224
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V V+ G H +AL + G ++WG N GQLGLG +R P+ + +
Sbjct: 225 -WVAVSAGRHHTLALKADG--------TLWAWGRNYFGQLGLGGTTNRNAPEQVGSH--- 272
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
S WA V G H+ L R+ + W++G GQLG G T PEQV
Sbjct: 273 SDWA--GVIGGDRHS--LAVRE------DGTLWSWGQNNVGQLGLGDTVERRRPEQVGND 322
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILI 303
+ +V GL HT V + G +W+WG + GLG N +P+ +
Sbjct: 323 SDW---ATVSAGLLHTLAVKNDGTLWAWGGNGFGQLGLGDTDNRD----------APVQV 369
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ D + G +++ V +DG LWSWG G LG G T D AP V
Sbjct: 370 GSD-------NDWAALNAGQRYSLAVKNDG-SLWSWGWNDFGELGLGDTDDRHAPEQV 419
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 97/381 (25%), Positives = 140/381 (36%), Gaps = 91/381 (23%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
SL DG L G N++ + + P+ + +DS +V AG + +L
Sbjct: 285 SLAVREDGTLWSWGQNNVGQLGLGDTVERRRPEQVGNDSD--------WATVSAGLLHTL 336
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSA 145
A+ N G LW WG GF + + V GS++ A ++A
Sbjct: 337 AVKNDGTLWAWGGN---------GFGQLGLGDTD-------NRDAPVQVGSDNDWAALNA 380
Query: 146 GETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ Y D +SWG N+ G+LGLGD + R P E WA VT G +HT
Sbjct: 381 GQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDRHAP---EQVGGGMEWAA--VTAGMYHT 435
Query: 203 ----------------------ALLTHRKRPNDML--------------------ESMCW 220
++ + P + + W
Sbjct: 436 LGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTEADWAAASAGQYQTQAVKADGSLW 495
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
+G +GQLG G T P QV + S+ G HT V + G +W WG
Sbjct: 496 GWGRNHSGQLGLGDTDDRHAPVQVGGDSDWT---SLSVGREHTLAVKADGTLWGWGQNY- 551
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
N L + D +P + + D V+ G +T+ V DDG LW+WG
Sbjct: 552 -----NGQLGLGDTDDRKTPERVGSD-------SDWATVSAGTGYTLAVKDDG-TLWAWG 598
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
R G LG G T + AP V
Sbjct: 599 RNSHGQLGLGDTNNRDAPVQV 619
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 131/347 (37%), Gaps = 84/347 (24%)
Query: 63 DSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFS 111
D+ H AP ++ S V AG +LA+ G LW WG L ++
Sbjct: 209 DTDDRH-APEQVGSDSDWVAVSAGRHHTLALKADGTLWAWGRNYFGQLGLGGTTNRNAPE 267
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
V S + D+ G V G H +A+ ED +SWG NN GQLGLGD
Sbjct: 268 QVGSHS-----DWAG-----VIGGDRHSLAVR--------EDGTLWSWGQNNVGQLGLGD 309
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R RP E DS WA V+ G HT + + + W +G GQLG
Sbjct: 310 TVERRRP---EQVGNDSDWAT--VSAGLLHTLAVKN--------DGTLWAWGGNGFGQLG 356
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--------------- 276
G T + P QV + L + G ++ V + G +WSWG
Sbjct: 357 LGDTDNRDAPVQVGSDNDWAAL---NAGQRYSLAVKNDGSLWSWGWNDFGELGLGDTDDR 413
Query: 277 ------------------MEKGLGLCPNASLT---RNEAGDAISPILISGNGP-HGPKFQ 314
M LG+ + +L RN+ G+ +++ P
Sbjct: 414 HAPEQVGGGMEWAAVTAGMYHTLGVKADGTLRAWGRNDFGELGLGVMVYITSPLQTVTEA 473
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + G T V DG LW WGR SG LG G T D AP V
Sbjct: 474 DWAAASAGQYQTQAVKADG-SLWGWGRNHSGQLGLGDTDDRHAPVQV 519
>gi|397515719|ref|XP_003828093.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Pan
paniscus]
Length = 4798
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4031 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4087
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4088 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4136
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ + SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4137 AVS-------VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4188
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4189 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4237
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4238 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4274
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4176 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4229
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4230 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4281
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4282 ---VRQISAGRCHSAAWT 4296
>gi|242071255|ref|XP_002450904.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
gi|241936747|gb|EES09892.1| hypothetical protein SORBIDRAFT_05g020900 [Sorghum bicolor]
Length = 418
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/309 (27%), Positives = 131/309 (42%), Gaps = 56/309 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V AG S A+ G L++WG G V S TP+ V + V
Sbjct: 119 RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVS-TPTKVDCLTDFRIKMV 177
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL---------RPKIIET 183
A GSEH +A+ GE SWGA +G+LG G + S L P++I+
Sbjct: 178 ALGSEHSIAVTEEGEVL--------SWGAAGSGRLGHGRQSSILGFSLTTSEYTPRLIKN 229
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
F+ + ++ G H+A + + F G+ + G G + A P
Sbjct: 230 FDGIK---IKKIAAGMLHSACIDEKGT----------LFIFGQKTEKGFGRSNEAFRPNI 276
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V+E+P + V CG +HT VV+ +GD++SWG + N L SP ++
Sbjct: 277 VEEIP---FSEEVACGGYHTCVVTDSGDLYSWGSNE------NGCLGLGGTDMVCSPEIL 327
Query: 304 SGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSW----------GRGRSGVLGTGKT 352
+ F+ PV +V+CG HT +++ D W W G G LG G
Sbjct: 328 KSS-----LFKLPVSKVSCGWKHTAVISGDDIYTWGWGGANGTFFEEGHSSGGQLGHGND 382
Query: 353 IDFFAPAIV 361
+D+F P +V
Sbjct: 383 VDYFEPMMV 391
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 116/288 (40%), Gaps = 43/288 (14%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSST 106
L GA + +K + +I V G S+A+ G + WG S+
Sbjct: 152 LGKGAGKVVSTPTKVDCLTDFRIKMVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSS 211
Query: 107 EGGFSLVSS-FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
GFSL +S +TP + +F G + K+A G H + G +
Sbjct: 212 ILGFSLTTSEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFI----------FGQKT 261
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
+ G G RP I+E + P++ EV CG +HT ++T D+ +++G
Sbjct: 262 EKGFGRSNEAFRPNIVE----EIPFS-EEVACGGYHTCVVTD---SGDL-----YSWGSN 308
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD---VWSWGMEKGL- 281
ENG LG G T PE +K + + V CG HT+V+S GD W WG G
Sbjct: 309 ENGCLGLGGTDMVCSPEILKSSLFKLPVSKVSCGWKHTAVIS--GDDIYTWGWGGANGTF 366
Query: 282 ---GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
G L D P+++ P G K V V+CG HT
Sbjct: 367 FEEGHSSGGQLGHGNDVDYFEPMMV----PFG-KNARAVHVSCGFNHT 409
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/198 (30%), Positives = 88/198 (44%), Gaps = 29/198 (14%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG + G+LGLG ESR P + F + + CG HT LT R
Sbjct: 35 WGNGDYGRLGLGVLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQSGR-------- 86
Query: 219 CWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+ GL + GQLG G++ + L P +V + V V V G H+ V++ G ++ WG
Sbjct: 87 VFATGLNDFGQLGVGSSVTHTLEPVEVSGFHERV--VEVSAGNHHSCAVTADGKLFVWGR 144
Query: 278 EKG--LGLCPNAS--LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G LGL A ++ D ++ I VA G+ H++ VT++G
Sbjct: 145 NSGGQLGLGKGAGKVVSTPTKVDCLTDFRIK-------------MVALGSEHSIAVTEEG 191
Query: 334 YKLWSWGRGRSGVLGTGK 351
L SWG SG LG G+
Sbjct: 192 EVL-SWGAAGSGRLGHGR 208
>gi|410947370|ref|XP_003980422.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Felis catus]
Length = 527
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 113 NHGLMPCHIST--NLSNKQVTEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V + G+V+ WG N L
Sbjct: 163 GSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P IS G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 SSGNQPTPCRIS--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 270
Query: 353 IDFFAPAIVL 362
+ PA V+
Sbjct: 271 SNQSYPAPVV 280
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VTEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + + +G NGQLG G++ + P ++ L
Sbjct: 182 --VVVNIACGQMCSMAVVNTGE--------VYVWGYNGNGQLGLGSSGNQPTPCRISAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------APVVVE 282
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC AHT G ++ WG RG+S +L T
Sbjct: 283 -------KDRIIEIAACHLAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 336 FATPAVSWRLLSVE 349
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ N G +++WG + G L SS TP + G V
Sbjct: 183 VVNIACGQMCSMAVVNTGEVYVWG------YNGNGQLGLGSSGNQPTPCRISALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 237 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 276
>gi|348583539|ref|XP_003477530.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Cavia
porcellus]
Length = 551
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 112/236 (47%), Gaps = 34/236 (14%)
Query: 131 KVACGS----EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
K+AC S H+V + GE + SWG N GQLG G L P I T
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVF--------SWGHNAYGQLGNGTINHGLVPSHIST--N 148
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S V EV CGS+H+ +LT + + +G +GQ+G G+T + +P +V
Sbjct: 149 LSNKQVTEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGSGSTANQAIPRRVTG 200
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q +V++ CG + V G+V+ WG N L +G+ +P ++
Sbjct: 201 CLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLGSSGNQPTPCRVA-- 252
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + Q +VACG AHT+++TD+G ++++WG G LGTG + P V+
Sbjct: 253 ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNKSNQSYPTPVV 304
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 107/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VTEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQAIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVVNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC + HT G ++ WG RG+S L T
Sbjct: 307 -------KDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
F+ V W L+ E
Sbjct: 360 FSTPAVTWRLLSVE 373
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VVNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 300
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
F LG N G LG G QS L P ++ L + + +S G H + ++ G+V+SWG
Sbjct: 68 FVLGTNCSGCLGLGDVQSTLEPRRLDSLSDKKIACLSYGSGP-HIVLATTEGEVFSWG-H 125
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G N ++ + P IS N + + +VACG+ H++++T DG ++++
Sbjct: 126 NAYGQLGNGTINH-----GLVPSHISTNLSN----KQVTEVACGSYHSLVLTSDG-EVFA 175
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG SG +G+G T + P V
Sbjct: 176 WGYNNSGQVGSGSTANQAIPRRV 198
>gi|297696825|ref|XP_002825580.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Pongo abelii]
Length = 4864
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4097 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4153
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4154 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4202
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4203 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4254
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4255 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPLLA------GVIIED---VAVGA 4303
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4304 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4340
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4242 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPLLAGVI 4295
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4296 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4347
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4348 ---VRQISAGRCHSAAWT 4362
>gi|380817672|gb|AFE80710.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4854
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4087 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4144 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4192
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4193 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4244
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4245 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 4293
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4294 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4330
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4232 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 4285
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4286 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4337
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4338 ---VRQISAGRCHSAAWT 4352
>gi|410336797|gb|JAA37345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4854
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4087 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4143
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4144 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4192
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ + SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4193 AVS-------VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4244
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4245 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4293
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4294 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4330
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4232 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4285
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4286 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4337
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4338 ---VRQISAGRCHSAAWT 4352
>gi|297296624|ref|XP_002804832.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Macaca
mulatta]
Length = 4824
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4057 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4113
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4114 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4162
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4163 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4214
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4215 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 4263
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4264 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4300
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4202 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 4255
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4256 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4307
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4308 ---VRQISAGRCHSAAWT 4322
>gi|126131099|ref|NP_003913.3| probable E3 ubiquitin-protein ligase HERC1 [Homo sapiens]
gi|296434522|sp|Q15751.2|HERC1_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC1; AltName:
Full=HECT domain and RCC1-like domain-containing protein
1; AltName: Full=p532; AltName: Full=p619
gi|119598061|gb|EAW77655.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
gi|119598062|gb|EAW77656.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1, isoform CRA_b [Homo
sapiens]
Length = 4861
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4345 ---VRQISAGRCHSAAWT 4359
>gi|281347310|gb|EFB22894.1| hypothetical protein PANDA_002155 [Ailuropoda melanoleuca]
Length = 4871
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4103 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4160 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4208
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4209 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4260
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4261 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4309
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4310 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4346
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P +V
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVV 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4248 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4301
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4302 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4353
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4354 ---VRQISAGRCHSAAWT 4368
>gi|301756863|ref|XP_002914279.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Ailuropoda melanoleuca]
Length = 4861
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P +V
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVV 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4345 ---VRQISAGRCHSAAWT 4359
>gi|1477565|gb|AAD12586.1| p532 [Homo sapiens]
Length = 4861
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4345 ---VRQISAGRCHSAAWT 4359
>gi|383422561|gb|AFH34494.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4853
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4086 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4143 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4191
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4192 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4243
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4244 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 4292
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4293 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4329
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4231 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 4284
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4285 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4336
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4337 ---VRQISAGRCHSAAWT 4351
>gi|332235891|ref|XP_003267138.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Nomascus leucogenys]
Length = 4855
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 111/237 (46%), Gaps = 31/237 (13%)
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G VV+++CG +H + S G+ +++G + G+LGLG+ ++ P+ +
Sbjct: 4126 QGEEVVQMSCGFKHSAVVTSDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTAL 4177
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +V CG HT ++ SM W FG G+ G+LG G + + P+++
Sbjct: 4178 EG---YQIGQVACGLNHTLAVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKI 4227
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
L + + V CG + ++ G V+++G ++ +GL P RN P+L
Sbjct: 4228 DVLCG-IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA- 4283
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +D VA GA HT+ + +G +++WG G LG G T P +V
Sbjct: 4284 -----GVIIED---VAVGAEHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4331
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 69/143 (48%), Gaps = 25/143 (17%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
+++G G+ G+LGHG + P Q +E+ V + CG H++VV+S G ++++G
Sbjct: 4103 FSWGDGDYGKLGHGNSDRQRRPXQGEEV------VQMSCGFKHSAVVTSDGKLFTFGNGD 4156
Query: 278 --EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
GLG N L E A+ I QVACG HT+ V+ DG
Sbjct: 4157 YGRLGLGNTSNKKLP--ERVTALEGYQIG-------------QVACGLNHTLAVSADGSM 4201
Query: 336 LWSWGRGRSGVLGTGKTIDFFAP 358
+W++G G G LG G + +P
Sbjct: 4202 VWAFGDGDYGKLGLGNSTAKSSP 4224
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4233 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4286
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4287 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4338
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4339 ---VRQISAGRCHSAAWT 4353
>gi|225438323|ref|XP_002273073.1| PREDICTED: E3 ubiquitin-protein ligase HERC2 [Vitis vinifera]
gi|296082630|emb|CBI21635.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 128/314 (40%), Gaps = 60/314 (19%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGH 127
P KI + AG S AI G L+MWG +S+ + G ++ PS V +G
Sbjct: 117 PKKIIHIAAGYYHSAAITADGELYMWGK----NSNGQLGLGKKAANAVSVPSKVECLNGI 172
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL---------RP 178
++ VA GSEH VA GE SWGA +G+LG G S L RP
Sbjct: 173 SIKMVALGSEHSVAATDQGEAL--------SWGAGGSGRLGHGHESSLLGFFRTSSEYRP 224
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
++I V V G H+A + + FG + G ++A
Sbjct: 225 RLIRRLEGIK---VKNVAAGLLHSACIDE--------NGSVFIFGERAMDKFGFREAKNA 273
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
P + ELP Y V CG +HT V+SS+G++++WG + N L
Sbjct: 274 TAPSMISELP---YSKQVACGGYHTCVISSSGELFTWGSNE------NGCLGMGFMETIH 324
Query: 299 SPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSW----------GRGRSGVL 347
P I GP ++PV QV+CG HT +++ W W G G L
Sbjct: 325 FPERI-----EGPFSKNPVSQVSCGWKHTAAISEGNVFTWGWGGSYGTFSDDGHSSGGQL 379
Query: 348 GTGKTIDFFAPAIV 361
G G +D P +V
Sbjct: 380 GQGSDVDHIKPKMV 393
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 37/222 (16%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG + G+LGLG ES+ RP + F+ S + + CG HT LT ES
Sbjct: 38 WGNGDFGRLGLGSLESQWRPAVCSAFDHHS---LVAIACGGAHTLFLT---------ESG 85
Query: 219 C-WTFGLGENGQLGHGTTQSALV-PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
C + GL + GQLG ++ P +V LP+ + + + G +H++ +++ G+++ WG
Sbjct: 86 CVYAAGLNDFGQLGVSVDKNYTTEPLEVSALPKKI--IHIAAGYYHSAAITADGELYMWG 143
Query: 277 MEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
GLG +++ + ++ I I VA G+ H+V TD
Sbjct: 144 KNSNGQLGLGKKAANAVSVPSKVECLNGISIK-------------MVALGSEHSVAATDQ 190
Query: 333 GYKLWSWGRGRSGVLGTG---KTIDFFAPAIVLWPPLTEEFK 371
G L SWG G SG LG G + FF + P L +
Sbjct: 191 GEAL-SWGAGGSGRLGHGHESSLLGFFRTSSEYRPRLIRRLE 231
>gi|383422563|gb|AFH34495.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4846
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4079 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4136 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4184
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4185 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4236
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4237 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 4285
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4286 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4322
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4224 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 4277
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4278 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4329
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4330 ---VRQISAGRCHSAAWT 4344
>gi|403298208|ref|XP_003939923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Saimiri
boliviensis boliviensis]
Length = 4860
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4093 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4150 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4198
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ S+ W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4199 AVSADG-------SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4250
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4251 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4299
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4300 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4336
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4238 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4291
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4292 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4343
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4344 ---VRQISAGRCHSAAWT 4358
>gi|380788265|gb|AFE66008.1| putative E3 ubiquitin-protein ligase HERC1 [Macaca mulatta]
Length = 4861
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4345 ---VRQISAGRCHSAAWT 4359
>gi|355778100|gb|EHH63136.1| hypothetical protein EGM_16043 [Macaca fascicularis]
Length = 4862
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4345 ---IRQISAGRCHSAAWT 4359
>gi|156120637|ref|NP_001095465.1| E3 ISG15--protein ligase HERC5 [Bos taurus]
gi|151555709|gb|AAI49082.1| HERC5 protein [Bos taurus]
Length = 958
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG D G S+ TP V + G +V+++
Sbjct: 149 IIQITCGDYHSLALSKGGELFAWGQN--LDGQLGVGRIFASTSTPEIVENLSGVPLVQIS 206
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G YSWG N+ GQLGLG ++ P IE + V
Sbjct: 207 AGEAHSMALSMSGNV--------YSWGRNDCGQLGLGHTYNKESPSCIEALDDQK---VE 255
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + +TFG G+ GQLGH +TQ+ L P V L +
Sbjct: 256 FLACGGCHTALLTK--------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-RV 306
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWG 276
+ CG HT + VS G V+S+G
Sbjct: 307 TQIACGRQHTLAYVSDTGKVFSFG 330
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 34/233 (14%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQ 186
++++ CG H +AL GE ++WG N +GQLG+G S P+I+E
Sbjct: 148 NIIQITCGDYHSLALSKGGE--------LFAWGQNLDGQLGVGRIFASTSTPEIVENL-- 197
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T + P ++
Sbjct: 198 -SGVPLVQISAGEAHSMALS--------MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA 248
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Q V ++ CG HT++++ +G V+++G K L N + + P L++G
Sbjct: 249 LDDQKVEFLA--CGGCHTALLTKSGLVFTFGDGK------YGQLGHNSTQNELRPRLVTG 300
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ Q+ACG HT+ D K++S+G G+ G LG G T + P
Sbjct: 301 LVGN-----RVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 348
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 19/113 (16%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
++ + CG +H+ +S G++++WG + G+G AS + E + +S + +
Sbjct: 149 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL----- 202
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VQ++ G AH++ ++ G ++SWGR G LG G T + +P+ +
Sbjct: 203 --------VQISAGEAHSMALSMSG-NVYSWGRNDCGQLGLGHTYNKESPSCI 246
>gi|296213415|ref|XP_002753260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Callithrix jacchus]
gi|390468428|ref|XP_003733941.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 2
[Callithrix jacchus]
Length = 4860
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4093 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4150 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4198
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4199 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4250
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4251 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVLA------GVVIED---VAVGA 4299
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4300 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4336
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4238 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLAGVV 4291
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4292 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4343
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4344 ---VRQISAGRCHSAAWT 4358
>gi|301113129|ref|XP_002998335.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112629|gb|EEY70681.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2353
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 87/333 (26%), Positives = 143/333 (42%), Gaps = 56/333 (16%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S P + V V+C H V G Y++G N+ GQLG D
Sbjct: 686 TSESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQN-----LYTFGRNDYGQLGHNDS 740
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R P+ +E S + V CG +HT ++T + + FG + GQLG
Sbjct: 741 IDRKIPQFVEAL---SDQQIVSVACGQYHTMVVTASGK--------AFAFGKNDYGQLGI 789
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNAS 288
T ++ L P QV+ + + + CG +HT + S ++++G + GLG NAS
Sbjct: 790 DTMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGRS-NAS 848
Query: 289 LTRN----EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
T N + + + ++ G +D V++ACG HT+ V+D+G ++ +GR
Sbjct: 849 STSNLQLQQQRFSNARLIDELEG------KDIVRIACGCYHTIAVSDNGV-MYVFGRNNH 901
Query: 345 GVLGTGKTI---------DFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEER 395
G LGTG T DF + L + F + TGG +D+ +D E+
Sbjct: 902 GQLGTGDTTERVYPFPIDDFVGKRVAL---VAAGFYHTVVLTGGKEDDKNERD--SGNEK 956
Query: 396 DE----------KLSSAMEEMKLLQSKLSVMER 418
+E ++ + +++LQ+ LS M R
Sbjct: 957 EELAACFSSPRLQMYMILATLRILQANLSQMLR 989
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQ 186
++++ G+EH V L + G+ ++ G N+NGQ G G R S L E
Sbjct: 597 IIQIGAGNEHTVVLTADGK--------VFTCGYNDNGQCGQGGTARVSHLS----EIPKM 644
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
DS + G HT L++ R T G GQLGHG T S VP+ ++
Sbjct: 645 DSGSSQAHAYNGCEHTILVSTDGR--------VATCGYNYRGQLGHGNTTSESVPKIIRS 696
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L + + V C +HT + G++ + G L N++ D P +
Sbjct: 697 LENKIVRL-VSCSYYHTVLACEDGNLQNL---YTFGRNDYGQLGHNDSIDRKIPQFVEAL 752
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q V VACG HT++VT G K +++G+ G LG + AP V
Sbjct: 753 SD-----QQIVSVACGQYHTMVVTASG-KAFAFGKNDYGQLGIDTMENQLAPVQV 801
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 39/232 (16%)
Query: 141 ALVSAGETYKGED---LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
A VS T ED +S G N+ G+LG GD SR + I+ Q + ++
Sbjct: 546 AFVSNDTTIFHEDEGEREVWSCGQNSYGELGHGDTASRKSFERIQALQQKE---IIQIGA 602
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
G+ HT +LT + +T G +NGQ G G T ++ ++
Sbjct: 603 GNEHTVVLT--------ADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAY 654
Query: 258 CGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
G HT +VS+ G V + G + G G N +++ I+ S
Sbjct: 655 NGCEHTILVSTDGRVATCGYNYRGQLGHG---------NTTSESVPKIIRS--------L 697
Query: 314 QDPVQ--VACGAAHTVLVTDDG--YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ + V+C HTVL +DG L+++GR G LG +ID P V
Sbjct: 698 ENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFV 749
>gi|355692784|gb|EHH27387.1| hypothetical protein EGK_17574 [Macaca mulatta]
Length = 4862
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4345 ---IRQISAGRCHSAAWT 4359
>gi|291221016|ref|XP_002730519.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 353
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K + G S I +G L+ +G+ D G + + P V V V
Sbjct: 37 KAMHISCGDEHSAIITESGRLYTFGS---NDWGQLGLGHMKPTTKPGCVKSLKQEGVNLV 93
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H + AG YS+GA ++GQLG GD + P++I + P
Sbjct: 94 ACGRSHTIVCTKAGR--------LYSFGAGSDGQLGTGDAQCATSPQLI-----NLPEQK 140
Query: 193 YE-VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
Y+ ++ G+ H+A LT + + +G G GQLG G T S P KEL +
Sbjct: 141 YKLLSAGTDHSAALT--------TDGTLYMWGSGSEGQLGLGNTDSVETP---KELKFHS 189
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG +HT++V+ G ++++G EK G LT ++ D +P H
Sbjct: 190 SVSWVSCGYYHTAIVTDDGKLYTFG-EKEFG---KLGLTEDQLEDTTTP-------KHVE 238
Query: 312 KFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ ++ VACG AHT +++D G L+++G G G LG G ++
Sbjct: 239 SITEKIKLVACGGAHTAVISDVG-NLYTFGDGMHGQLGNGPSL 280
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 117/236 (49%), Gaps = 42/236 (17%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ G++H AL + G Y WG+ + GQLGLG+ +S PK ++ F+ W
Sbjct: 144 LSAGTDHSAALTTDG--------TLYMWGSGSEGQLGLGNTDSVETPKELK-FHSSVSW- 193
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQ 249
V+CG +HTA++T + +TFG E G+LG Q P+ V+ + +
Sbjct: 194 ---VSCGYYHTAIVTD--------DGKLYTFGEKEFGKLGLTEDQLEDTTTPKHVESITE 242
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ LV+ CG HT+V+S G+++++ GM LG P SL + P ++
Sbjct: 243 KIKLVA--CGGAHTAVISDVGNLYTFGDGMHGQLGNGP--SLLQLSL-----PQKVARLS 293
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT--IDFFAPAIV 361
H K+ V+CG HT ++T+ G ++++G GR G LG + + F P V
Sbjct: 294 EHKCKY-----VSCGDNHTAVITEKG-AMYTFGDGRHGKLGISEEDFCNIFKPCKV 343
Score = 39.3 bits (90), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 16/111 (14%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG H+++++ +G ++++G LGL T+ P + G
Sbjct: 41 ISCGDEHSAIITESGRLYTFGSNDWGQLGLGHMKPTTK--------PGCVKSLKQEGVNL 92
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
VACG +HT++ T G +L+S+G G G LGTG +P ++ P
Sbjct: 93 -----VACGRSHTIVCTKAG-RLYSFGAGSDGQLGTGDAQCATSPQLINLP 137
>gi|383852591|ref|XP_003701810.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Megachile rotundata]
Length = 1135
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/299 (28%), Positives = 133/299 (44%), Gaps = 54/299 (18%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKV 132
V G +LA++ G L+ WG S+ EG L S P V VV+V
Sbjct: 166 VACGAHHTLAVNEWGQLFSWG------SNAEGQLGLNSKNLIECVPHMVRALGTSVVVQV 219
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWA 191
ACG HV+AL + G+ YSWG+N++GQLGLG D ++ ++PK+I + P A
Sbjct: 220 ACGINHVLALTNNGK--------LYSWGSNSDGQLGLGTDVKNEIKPKLISSL-AGVPIA 270
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQ 249
+TCG +H+ ++ FG G+N GQLG T++ +P Q++ L Q
Sbjct: 271 F--ITCGGYHSMAISKSGA----------VFGWGKNTFGQLGLNDTRNRNLPRQLQTL-Q 317
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 305
+ CG + ++ G V++ G + G G N L R S +
Sbjct: 318 NAKVCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGNTSNEILPRQVMELMGSTV---- 373
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG HT+ + ++++WG G +G LG T P +V P
Sbjct: 374 -----------TQISCGKRHTLGLVPSRGRVYAWGLGGAGQLGNNITRSVATPQVVHGP 421
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 114/240 (47%), Gaps = 41/240 (17%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRLR 177
P+ + + + ++AC E ++A+ + T K + WG+ +G+LGLG + E+ L
Sbjct: 48 PIKNANRNKKRRLAC--EPIIAVEYSTVTDKN----MFCWGSTIHGELGLGGIEDENILV 101
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--GTT 235
P+ ++ F + + + ++ CG +T L+T + ++ G + GQLGH G
Sbjct: 102 PRELD-FQKAT--EIEQIACGENYTVLITR--------DGQVYSCGNNDYGQLGHEKGRK 150
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNE 293
+ L+P L +V+ V CG HT V+ G ++SWG E LGL +
Sbjct: 151 RLQLIP----GLDAFVF-KKVACGAHHTLAVNEWGQLFSWGSNAEGQLGLNSKNLI---- 201
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
P ++ G VQVACG H + +T++G KL+SWG G LG G +
Sbjct: 202 ---ECVPHMVRALGT-----SVVVQVACGINHVLALTNNG-KLYSWGSNSDGQLGLGTDV 252
>gi|114657534|ref|XP_001174017.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 isoform 1
[Pan troglodytes]
gi|410226250|gb|JAA10344.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410226252|gb|JAA10345.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410263976|gb|JAA19954.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293838|gb|JAA25519.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410293840|gb|JAA25520.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
gi|410336799|gb|JAA37346.1| hect (homologous to the E6-AP (UBE3A) carboxyl terminus) domain and
RCC1 (CHC1)-like domain (RLD) 1 [Pan troglodytes]
Length = 4861
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ + SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVS-------VDGSMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4345 ---VRQISAGRCHSAAWT 4359
>gi|296486689|tpg|DAA28802.1| TPA: hect domain and RLD 5 [Bos taurus]
Length = 963
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG D G S+ TP V + G +V+++
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQN--LDGQLGVGRIFASTSTPEIVENLSGVPLVQIS 211
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G YSWG N+ GQLGLG ++ P IE + V
Sbjct: 212 AGEAHSMALSMSGNV--------YSWGRNDCGQLGLGHTYNKESPSCIEALDDQK---VE 260
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + +TFG G+ GQLGH +TQ+ L P V L +
Sbjct: 261 FLACGGCHTALLTK--------SGLVFTFGDGKYGQLGHNSTQNELRPRLVTGLVGN-RV 311
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWG 276
+ CG HT + VS G V+S+G
Sbjct: 312 TQIACGRQHTLAYVSDTGKVFSFG 335
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 111/233 (47%), Gaps = 34/233 (14%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQ 186
++++ CG H +AL GE ++WG N +GQLG+G S P+I+E
Sbjct: 153 NIIQITCGDYHSLALSKGGE--------LFAWGQNLDGQLGVGRIFASTSTPEIVENL-- 202
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T + P ++
Sbjct: 203 -SGVPLVQISAGEAHSMALS--------MSGNVYSWGRNDCGQLGLGHTYNKESPSCIEA 253
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Q V ++ CG HT++++ +G V+++G K L N + + P L++G
Sbjct: 254 LDDQKVEFLA--CGGCHTALLTKSGLVFTFGDGK------YGQLGHNSTQNELRPRLVTG 305
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ Q+ACG HT+ D K++S+G G+ G LG G T + P
Sbjct: 306 LVGN-----RVTQIACGRQHTLAYVSDTGKVFSFGSGKEGQLGNGGTRNQLIP 353
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 58/113 (51%), Gaps = 19/113 (16%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
++ + CG +H+ +S G++++WG + G+G AS + E + +S + +
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQNLDGQLGVGRI-FASTSTPEIVENLSGVPL----- 207
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VQ++ G AH++ ++ G ++SWGR G LG G T + +P+ +
Sbjct: 208 --------VQISAGEAHSMALSMSG-NVYSWGRNDCGQLGLGHTYNKESPSCI 251
>gi|219847606|ref|YP_002462039.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541865|gb|ACL23603.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 784
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/309 (28%), Positives = 125/309 (40%), Gaps = 46/309 (14%)
Query: 60 LEDDSKTNHKAP-------IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D + TN P + ++ AG + A+ ++G +W WG DS G +
Sbjct: 449 LGDGTTTNRSTPGAVSGLPSGVTAIAAGNYHTCALTSSGGVWCWGR---NDSGQLGDGTT 505
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ TP V V +A G H AL+S+G + WG NN GQLG G
Sbjct: 506 TNRSTPGAVGGLP-SGVTAIAAGDYHTCALMSSGGVW--------CWGLNNRGQLGDGSY 556
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
P + P V + G++HT LT W +G +GQLG
Sbjct: 557 TDSSTPVAVGGL----PSGVMAIAAGNYHTCALTGSDG--------VWCWGTNSDGQLGD 604
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT + P V LP V ++ G +HT ++S+G VW WG L + R+
Sbjct: 605 GTTTNRSTPVAVSGLPSGVTAIAA--GNYHTCALTSSGGVWCWGYNLSGQLGDGTTTNRS 662
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G A+S + P G +A G HT +T G +W WG G LG G T
Sbjct: 663 TPG-AVSGL------PSG-----VTAIAAGDEHTCALTGSG-GVWCWGDNYYGQLGDGTT 709
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 710 TNRSTPGAV 718
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 117/291 (40%), Gaps = 39/291 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + ++ AGG + A+ ++G +W WG DS G S + TP V V
Sbjct: 263 PSGVTAIAAGGRYTCALTSSGGVWCWGR---NDSGQLGDGSFTNRSTPGAVGGLP-SGVT 318
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A G H AL S+G + WG N++GQLG G R P + P
Sbjct: 319 AIAAGGAHTCALTSSGGV--------WCWGGNDSGQLGDGSYTDRSTPGAVSGL----PS 366
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + G HT T W +G GQLG GTT P V LP
Sbjct: 367 GVTAIAAGGAHTCARTSSGG--------VWCWGGNFYGQLGDGTTTDRSTPGAVSGLPSG 418
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V ++ G +HT ++ + VW WG + G + + T A+S + P G
Sbjct: 419 VTAIAA--GNYHTCALTGSDGVWCWG-DNFYGQLGDGTTTNRSTPGAVSGL------PSG 469
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G HT +T G +W WGR SG LG G T + P V
Sbjct: 470 -----VTAIAAGNYHTCALTSSG-GVWCWGRNDSGQLGDGTTTNRSTPGAV 514
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 89/306 (29%), Positives = 125/306 (40%), Gaps = 40/306 (13%)
Query: 57 PDSLEDDSKTNHKAPIK-ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
P S T+ +P++ + ++ AG + A+ +G +W WG S G S
Sbjct: 44 PPSTTTRLHTSSFSPLQGVTAIAAGSWHTCALTGSGEVWCWG---YNWSGQLGDGSYTDR 100
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
TP V V +A G H AL S+G ++C WG N GQLG G R
Sbjct: 101 STPVAVSGLP-SGVTAIAAGGAHTCALTSSG------GVMC--WGGNYFGQLGDGSYTDR 151
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P + P V + G HT L M W +G +GQLG G+T
Sbjct: 152 STPVAVSGL----PSGVTAIAAGGAHTCAL--------MSSGGVWCWGYNLSGQLGDGST 199
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+ P V LP V ++ G HT ++ +G VW WG + G G + S T
Sbjct: 200 IYHITPVAVSGLPSEVTAIAA--GYAHTCALTGSGGVWCWG-DNGFGQLGDGSFT----- 251
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
D+ +P + G P G +A G +T +T G +W WGR SG LG G +
Sbjct: 252 DSSTPAAVGGL-PSG-----VTAIAAGGRYTCALTSSG-GVWCWGRNDSGQLGDGSFTNR 304
Query: 356 FAPAIV 361
P V
Sbjct: 305 STPGAV 310
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 92/227 (40%), Gaps = 39/227 (17%)
Query: 60 LEDDSKTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGG 109
L D S T+ P+ + ++ AG + A+ + +W WG + L D +T
Sbjct: 551 LGDGSYTDSSTPVAVGGLPSGVMAIAAGNYHTCALTGSDGVWCWGTNSDGQLGDGTT--- 607
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ TP V V +A G+ H AL S+G + WG N +GQLG
Sbjct: 608 ---TNRSTPVAVSGLP-SGVTAIAAGNYHTCALTSSGGVW--------CWGYNLSGQLGD 655
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G +R P + P V + G HT LT W +G GQ
Sbjct: 656 GTTTNRSTPGAVSGL----PSGVTAIAAGDEHTCALTGSGG--------VWCWGDNYYGQ 703
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
LG GTT + P V LP V ++ G++HT ++ +G V WG
Sbjct: 704 LGDGTTTNRSTPGAVSGLPSGVTAIAA--GVYHTCALTGSGGVMCWG 748
>gi|410961060|ref|XP_003987103.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 [Felis catus]
Length = 4861
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P +V
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVV 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4345 ---VRQISAGRCHSAAWT 4359
>gi|229442453|gb|AAI72909.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2440
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
>gi|332819950|ref|XP_003310459.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Pan troglodytes]
Length = 957
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/188 (35%), Positives = 94/188 (50%), Gaps = 23/188 (12%)
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
+G L+ WG G S+ TP V G + +++ G H +AL +G Y
Sbjct: 89 SGELFAWGQNL--HGQLGVGRKFPSTTTPQIVEHLAGVPLAQISAGEAHSMALSMSGNIY 146
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
SWG N GQLGLG ES+ P +IE + V V CG H+ALLT
Sbjct: 147 --------SWGKNEFGQLGLGHTESKDYPSLIEGLDNQK---VEFVACGGSHSALLTQ-- 193
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSS 268
+ + +TFG G++GQLGH +TQ+ L P V EL +Y + + CG +HT + VS
Sbjct: 194 ------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEY-RVTQIACGRWHTLAYVSD 246
Query: 269 AGDVWSWG 276
G V+S+G
Sbjct: 247 LGKVFSFG 254
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 101/207 (48%), Gaps = 26/207 (12%)
Query: 157 YSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
++WG N +GQLG+G + S P+I+E P A +++ G H+ L+ +
Sbjct: 93 FAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AGVPLA--QISAGEAHSMALS--------M 141
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G E GQLG G T+S P ++ L Q V V+ CG H+++++ G +++
Sbjct: 142 SGNIYSWGKNEFGQLGLGHTESKDYPSLIEGLDNQKVEFVA--CGGSHSALLTQDGLLFT 199
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
+G K + L N + + P L++ + Q+ACG HT+ D
Sbjct: 200 FGAGK------HGQLGHNSTQNELRPCLVAELVEY-----RVTQIACGRWHTLAYVSDLG 248
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K++S+G G+ G LG G T D P V
Sbjct: 249 KVFSFGSGKDGQLGNGGTRDQLMPLPV 275
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 82/178 (46%), Gaps = 21/178 (11%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H A + + + AG S+A+ +G ++ WG + G S PS +
Sbjct: 120 HLAGVPLAQISAGEAHSMALSMSGNIYSWGK---NEFGQLGLGHTESKDYPSLIEGLDNQ 176
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V VACG H L G + +++GA +GQLG ++ LRP ++ +
Sbjct: 177 KVEFVACGGSHSALLTQDG--------LLFTFGAGKHGQLGHNSTQNELRPCLVAELVE- 227
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ V ++ CG +HT +D+ ++FG G++GQLG+G T+ L+P VK
Sbjct: 228 --YRVTQIACGRWHTLAYV-----SDL--GKVFSFGSGKDGQLGNGGTRDQLMPLPVK 276
>gi|260832820|ref|XP_002611355.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
gi|229296726|gb|EEN67365.1| hypothetical protein BRAFLDRAFT_120334 [Branchiostoma floridae]
Length = 1187
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 131/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + S P + G VV
Sbjct: 389 IKKVAVNSGGKHCLALSSEGEVFSWGEA---EDGKLGHGNRNSCDRPRVIESLRGKEVVD 445
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H + S GE ++WG G+LG GD E +++PK++E
Sbjct: 446 IAAGGAHSACITSTGE--------LFTWGKGRYGRLGHGDSEDQMKPKLVEALKGVR--- 494
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + W++G G+ G+LG G + +P++V+ L
Sbjct: 495 VIDVACGSGDAQTLCITD------DDSVWSWGDGDYGKLGRGGSDGCKIPQKVEALIGQ- 547
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V V+CG + ++ +G V++WG KG LG + + R A+
Sbjct: 548 GVVKVECGSQFSVALTKSGCVYTWG--KGDYHRLGHGSDDHVRRPRKVAAL--------- 596
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ + +A G+ H V TD G ++++WG G LG G T P +V
Sbjct: 597 ----QGKNVISIATGSLHCVACTDQG-EVFTWGDNDEGQLGDGSTSAIPRPRLV 645
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ V+ G S+A+ +G ++ WG D G S P V G V+ +A
Sbjct: 549 VVKVECGSQFSVALTKSGCVYTWGKG---DYHRLGHGSDDHVRRPRKVAALQGKNVISIA 605
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS H VA GE + +WG N+ GQLG G + RP+++ +
Sbjct: 606 TGSLHCVACTDQGEVF--------TWGDNDEGQLGDGSTSAIPRPRLVAALQGKK---IN 654
Query: 194 EVTCGSFHT 202
V CGS H+
Sbjct: 655 RVACGSAHS 663
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 65/129 (50%), Gaps = 15/129 (11%)
Query: 235 TQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG + + L
Sbjct: 372 TESVSSPTLLESI-QHVHIKKVAVNSGGKHCLALSSEGEVFSWGEAE------DGKLGHG 424
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P +I + ++ V +A G AH+ +T G +L++WG+GR G LG G +
Sbjct: 425 NRNSCDRPRVI-----ESLRGKEVVDIAAGGAHSACITSTG-ELFTWGKGRYGRLGHGDS 478
Query: 353 IDFFAPAIV 361
D P +V
Sbjct: 479 EDQMKPKLV 487
>gi|242014091|ref|XP_002427731.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
gi|212512172|gb|EEB14993.1| hect E3 ubiquitin ligase, putative [Pediculus humanus corporis]
Length = 4834
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ G ++ WG D G + P + G +V
Sbjct: 4055 IKKVAVNSGGKHCLALSTDGKVYSWGE---GDDGKLGHGNKNGCDHPQLIDALQGKEIVD 4111
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H A+ + GE Y +WG G+LG GD E +++PK++ET +
Sbjct: 4112 IACGGAHSAAVTAGGEIY--------TWGKGRYGRLGHGDSEDQMKPKLVETL---IGFK 4160
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4161 VIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKIPMKIESLAG-L 4213
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V V+CG + ++ +G V++WG KG LG + + + A+
Sbjct: 4214 GVVKVECGSQFSVALTRSGSVYTWG--KGDYHRLGHGSDEHVRHPKKIAAL--------- 4262
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G K + +A G+ H V +D G ++++WG G LG G P +V+
Sbjct: 4263 -QGKKI---ICIATGSLHCVACSDLG-EVFTWGDNDEGQLGDGTMNAIHRPRLVV 4312
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 147/336 (43%), Gaps = 58/336 (17%)
Query: 32 DGQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+G+LG SN++ PC + ++ IK +V +GG ++A+
Sbjct: 3047 NGRLGLGHSNNVATPCQLTSL----------------NQYVIKKVAVHSGGKHAMALTLD 3090
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G ++ WG + G + +S P + + +ACGS H A+ S GE
Sbjct: 3091 GKVFSWGE---GEDGKLGHDNRLSLDRPKMIEALKSKRIRDIACGSSHSAAISSTGE--- 3144
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
++WG G+LG GD ++LRPK+++ + +V CGS L
Sbjct: 3145 -----LFTWGLGEYGRLGHGDNLTQLRPKLVKALLGHH---IVQVACGSRDAQTLALSA- 3195
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
E + +++G G+ G+LG G ++ +P ++ L + + ++CG + ++ G
Sbjct: 3196 -----EGLVFSWGDGDFGKLGRGGSEGCDIPHNIERL-NGLGVCMIECGAQFSLALTKFG 3249
Query: 271 DVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
V++WG KG LG + + + +++S I V VA GA H
Sbjct: 3250 QVYTWG--KGDYFRLGHGSDQHVRKPTLVESLSEKKI-------------VHVAVGALHC 3294
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ TD G ++++WG G G G + P++VL
Sbjct: 3295 LCATDQG-QVYAWGDNDHGQQGNGTILVNRKPSLVL 3329
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 116/251 (46%), Gaps = 42/251 (16%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P + F G + K+A ++ H +AL G+ Y SWG + G+LG GD SR
Sbjct: 510 PEQIEGFDGKEISKLAAHADGKHSLALSCDGDVY--------SWGNGDGGRLGHGDNNSR 561
Query: 176 LRP-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
+P KI E ++ V ++CG+ ++A +T +T+G G G+LGHGT
Sbjct: 562 DQPTKITELVGKN----VIHISCGATYSAAVTSSGE--------VYTWGRGNYGRLGHGT 609
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
++ VP V L Y ++V + CG T V++ G V+SWG L
Sbjct: 610 SEDHTVPTLVVGLKDY-FIVDIACGSGDAQTLAVTNTGLVFSWGDGG------YGKLGTG 662
Query: 293 EAGDAISPILISGNGPHGPKFQD--PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + +P LI K QD +V CG+ ++ +T G +++WG+G + LG G
Sbjct: 663 GSDGSKTPKLIE-------KLQDIEVARVYCGSQFSLALTKSG-SVYTWGKGDNHRLGHG 714
Query: 351 KTIDFFAPAIV 361
P +V
Sbjct: 715 SENHVRFPKLV 725
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 120/265 (45%), Gaps = 35/265 (13%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
D+ +++WG L D GG P + +A GS+ + +
Sbjct: 2982 DSPTKVFVWG---LNDKDQLGGLKGSKVKVPVYSESLTALKPIHIAGGSKSLFIV----- 3033
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+Y G+ Y+ G NG+LGLG + P + + NQ V V G H LT
Sbjct: 3034 SYDGK---LYACGEGTNGRLGLGHSNNVATPCQLTSLNQYVIKKV-AVHSGGKHAMALT- 3088
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
L+ +++G GE+G+LGH S P+ ++ L + + + CG H++ +S
Sbjct: 3089 -------LDGKVFSWGEGEDGKLGHDNRLSLDRPKMIEAL-KSKRIRDIACGSSHSAAIS 3140
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
S G++++WG+ + L +LT+ + P L+ H VQVACG+ A
Sbjct: 3141 STGELFTWGLGEYGRLGHGDNLTQ------LRPKLVKALLGH-----HIVQVACGSRDAQ 3189
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTG 350
T+ ++ +G ++SWG G G LG G
Sbjct: 3190 TLALSAEGL-VFSWGDGDFGKLGRG 3213
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/252 (22%), Positives = 97/252 (38%), Gaps = 63/252 (25%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + A G SLA+ G ++ WGN D G S P+ + + G V+
Sbjct: 521 ISKLAAHADGKHSLALSCDGDVYSWGN---GDGGRLGHGDNNSRDQPTKITELVGKNVIH 577
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CG+ + A+ S+GE Y +WG N G+LG G E P ++ +
Sbjct: 578 ISCGATYSAAVTSSGEVY--------TWGRGNYGRLGHGTSEDHTVPTLVVGLKD---YF 626
Query: 192 VYEVTCGS--------------------------------FHTALLTHRKRPNDMLESMC 219
+ ++ CGS T L + + ++ C
Sbjct: 627 IVDIACGSGDAQTLAVTNTGLVFSWGDGGYGKLGTGGSDGSKTPKLIEKLQDIEVARVYC 686
Query: 220 --------------WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTS 264
+T+G G+N +LGHG+ P+ V+ L + + V+V G H
Sbjct: 687 GSQFSLALTKSGSVYTWGKGDNHRLGHGSENHVRFPKLVEGLNGKCIKKVAVGSG--HVL 744
Query: 265 VVSSAGDVWSWG 276
++ G+V+ WG
Sbjct: 745 ALTDDGEVYGWG 756
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +G+++ WG D G S
Sbjct: 4196 GGSDGCKIPMKIESLAGLGVVKVECGSQFSVALTRSGSVYTWGK---GDYHRLGHGSDEH 4252
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P + G ++ +A GS H VA GE + +WG N+ GQLG G +
Sbjct: 4253 VRHPKKIAALQGKKIICIATGSLHCVACSDLGEVF--------TWGDNDEGQLGDGTMNA 4304
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ T + + V CGS H+
Sbjct: 4305 IHRPRLVVTLQGKN---INRVACGSAHS 4329
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 57/127 (44%), Gaps = 14/127 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I++ V G SLA+ +G+++ WG D+ G S P V +G + K
Sbjct: 679 IEVARVYCGSQFSLALTKSGSVYTWGK---GDNHRLGHGSENHVRFPKLVEGLNGKCIKK 735
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA GS HV+AL GE Y WG N+NGQ+G + P ++ +
Sbjct: 736 VAVGSGHVLALTDDGEV--------YGWGRNDNGQVGETSETNVSEPTLLTLLQGKN--- 784
Query: 192 VYEVTCG 198
+ ++ CG
Sbjct: 785 IVDIDCG 791
Score = 51.6 bits (122), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 65/135 (48%), Gaps = 27/135 (20%)
Query: 235 TQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
T + L P ++ + Q++++ V+V+ G H +S+ G V+SWG
Sbjct: 4038 TDTILTPTLLESI-QHIFIKKVAVNSGGKHCLALSTDGKVYSWG---------------- 4080
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQ------VACGAAHTVLVTDDGYKLWSWGRGRSGV 346
GD + NG P+ D +Q +ACG AH+ VT G ++++WG+GR G
Sbjct: 4081 -EGDDGKLGHGNKNGCDHPQLIDALQGKEIVDIACGGAHSAAVTAGG-EIYTWGKGRYGR 4138
Query: 347 LGTGKTIDFFAPAIV 361
LG G + D P +V
Sbjct: 4139 LGHGDSEDQMKPKLV 4153
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 12/101 (11%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H+ +S GDV+SWG G L + +R++ L+ N H ++C
Sbjct: 532 HSLALSCDGDVYSWGNGDGGRLGHGDNNSRDQPTKITE--LVGKNVIH---------ISC 580
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
GA ++ VT G ++++WGRG G LG G + D P +V+
Sbjct: 581 GATYSAAVTSSG-EVYTWGRGNYGRLGHGTSEDHTVPTLVV 620
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 60/149 (40%), Gaps = 15/149 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ G ++ WG D G S P+ V +V VA
Sbjct: 3232 VCMIECGAQFSLALTKFGQVYTWGK---GDYFRLGHGSDQHVRKPTLVESLSEKKIVHVA 3288
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H + G+ Y+WG N++GQ G G +P ++ V
Sbjct: 3289 VGALHCLCATDQGQV--------YAWGDNDHGQQGNGTILVNRKPSLVLNLEG---VRVN 3337
Query: 194 EVTCGSFHT-ALLTHRKRPNDMLESMCWT 221
V CGS H+ A T +M E + +T
Sbjct: 3338 RVACGSSHSIAWTTSDTHAPNMTEPVLFT 3366
Score = 41.2 bits (95), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + L + G ++ WG+ D +G +++ + PS V + G V +V
Sbjct: 3283 KIVHVAVGALHCLCATDQGQVYAWGD---NDHGQQGNGTILVNRKPSLVLNLEGVRVNRV 3339
Query: 133 ACGSEHVVA 141
ACGS H +A
Sbjct: 3340 ACGSSHSIA 3348
>gi|444730943|gb|ELW71312.1| putative E3 ubiquitin-protein ligase HERC1 [Tupaia chinensis]
Length = 4409
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 452 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 508
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 509 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 560
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 561 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 608
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 609 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 660
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 661 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 704
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 705 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 758
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 759 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 811
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 812 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 844
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 45/278 (16%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 3632 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 3688
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ V CG HT
Sbjct: 3689 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPE--------------RVACGLNHTL 3726
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 3727 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 3778
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 3779 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVLA------GVVIED---VAVGA 3827
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 3828 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 3864
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 477
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 478 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 537
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 538 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 584
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 585 GGGDNGKLGHGDTNRVYKPKVI 606
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 3766 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLAGVV 3819
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 3820 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 3871
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 3872 ---VRQISAGRCHSAAWT 3886
>gi|395822793|ref|XP_003784693.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Otolemur
garnettii]
Length = 4828
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4061 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4117
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4118 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4166
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4167 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4218
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4219 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4267
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4268 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4304
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4206 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4259
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4260 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4311
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4312 ---IRQISAGRCHSAAWT 4326
>gi|291402886|ref|XP_002718216.1| PREDICTED: hect domain and RCC1-like domain 1 [Oryctolagus
cuniculus]
Length = 4860
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4093 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4150 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4198
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4199 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4250
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4251 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVLA------GVVIED---VAVGA 4299
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4300 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4336
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4238 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLAGVV 4291
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4292 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4343
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4344 ---IRQISAGRCHSAAWT 4358
>gi|426233168|ref|XP_004010589.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Ovis aries]
Length = 4856
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4089 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4145
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4146 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4194
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4195 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4246
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4247 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4295
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4296 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4332
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4234 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4287
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4288 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4339
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4340 ---VRQISAGRCHSAAWT 4354
>gi|219125443|ref|XP_002182991.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405785|gb|EEC45727.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 341
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 122/245 (49%), Gaps = 33/245 (13%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V G V ++ACGS H V L + GE ++WG ++G+LG GD +
Sbjct: 24 PTYVDALRGVGVQQIACGSGHTVVLTTDGE--------VFTWGRGDDGRLGHGDNGWKYV 75
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P++ ++ + V +VTCGS+HTA +T N L +T+G G G+LGHG
Sbjct: 76 PRMTQSL---AGQIVLQVTCGSYHTAAVT----GNGDL----YTWGGGMYGKLGHGDEAG 124
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKGLGLCPNASLTRNEAGD 296
P++V+ L + + CG HT++V+++G +++WG E G+ A E
Sbjct: 125 HATPKRVEALVG-ATVAQIACGSRHTAIVTASGALYTWGDKENGV-----AGHGETEGHQ 178
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ +L S + Q++ HT +VTD G +L++WG G+ G LG +
Sbjct: 179 YLPRLLES------MAAKRVAQISACGFHTAIVTDAG-ELFTWGEGKFGRLGHMSERNCH 231
Query: 357 APAIV 361
+P IV
Sbjct: 232 SPTIV 236
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 97/198 (48%), Gaps = 28/198 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG +GQLGLGD + P ++ V ++ CGS HT +LT +
Sbjct: 3 FTWGRGEDGQLGLGDTSDQDEPTYVDALR---GVGVQQIACGSGHTVVLT--------TD 51
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW- 275
+T+G G++G+LGHG VP + L + L V CG +HT+ V+ GD+++W
Sbjct: 52 GEVFTWGRGDDGRLGHGDNGWKYVPRMTQSLAGQIVL-QVTCGSYHTAAVTGNGDLYTWG 110
Query: 276 -GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
GM LG A + +A+ ++ Q+ACG+ HT +VT G
Sbjct: 111 GGMYGKLGHGDEAGHATPKRVEALVGATVA-------------QIACGSRHTAIVTASG- 156
Query: 335 KLWSWGRGRSGVLGTGKT 352
L++WG +GV G G+T
Sbjct: 157 ALYTWGDKENGVAGHGET 174
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 130/299 (43%), Gaps = 56/299 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ V G + A+ G L+ WG E G + TP V G TV +
Sbjct: 87 VLQVTCGSYHTAAVTGNGDLYTWGGGMYGKLGHGDEAGHA-----TPKRVEALVGATVAQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPW 190
+ACGS H + ++G Y+WG NG G G+ E + P+++E+
Sbjct: 142 IACGSRHTAIVTASG--------ALYTWGDKENGVAGHGETEGHQYLPRLLESMAAKR-- 191
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +++ FHTA++T D E W G G+ G+LGH + ++ P V
Sbjct: 192 -VAQISACGFHTAIVT------DAGELFTW--GEGKFGRLGHMSERNCHSPTIVD----- 237
Query: 251 VYLVS-----VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
Y+V V CG FHT+VVS G ++++G + + L N+ + ++P +
Sbjct: 238 -YMVGKKPRQVSCGGFHTAVVSEDGRLYTFGGGE------HGQLGHNDRVNKMTPTFV-- 288
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ D + Q+ CG +H+V +T G +++WG G G LG G P V
Sbjct: 289 ------EALDGMFVSQITCGWSHSVALTVKGL-VYTWGNGDHGKLGHGNGRKVAVPQAV 340
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 85/176 (48%), Gaps = 22/176 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A ++ + A G + + +AG L+ WG G S + +P+ V G
Sbjct: 188 AAKRVAQISACGFHTAIVTDAGELFTWGEGKF---GRLGHMSERNCHSPTIVDYMVGKKP 244
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+V+CG H A+VS ED Y++G +GQLG DR +++ P +E +
Sbjct: 245 RQVSCGGFHT-AVVS-------EDGRLYTFGGGEHGQLGHNDRVNKMTPTFVEALD---G 293
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++TCG H+ LT ++ + +T+G G++G+LGHG + VP+ V+
Sbjct: 294 MFVSQITCGWSHSVALT--------VKGLVYTWGNGDHGKLGHGNGRKVAVPQAVE 341
>gi|350578534|ref|XP_001927286.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sus scrofa]
Length = 4859
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4092 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4149 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4197
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4198 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4249
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4250 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4298
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4299 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4290
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4291 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4342
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4343 ---VRQISAGRCHSAAWT 4357
>gi|297841169|ref|XP_002888466.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
gi|297334307|gb|EFH64725.1| hypothetical protein ARALYDRAFT_475695 [Arabidopsis lyrata subsp.
lyrata]
Length = 1005
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 144/314 (45%), Gaps = 53/314 (16%)
Query: 58 DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSS 115
+SLED + + SV + A+ +G L++WG +GG S
Sbjct: 338 ESLED---------VAVRSVACSDHQTCAVTESGELYLWG--------IDGGTIEQSGSQ 380
Query: 116 FTPSPVWDFHGHT--VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
F + D G + + VACG+ H + S+G+ + ++G+ G LG G E
Sbjct: 381 FLTRKISDVLGGSLSIFSVACGAWHTAMVTSSGQLF--------TYGSRTFGVLGHGSLE 432
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH----RKRPNDMLESMCWTFGLGENGQ 229
S +PK +E+ + V V+CG +HTA + RK N +T+G G+ G+
Sbjct: 433 SVTKPKEVESLRR---MKVISVSCGPWHTAAIVETAIDRKFYNAKSCGKLFTWGDGDKGR 489
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNA 287
LGH + LVP V EL + + + V CG T +S +G V++ G + LG CP A
Sbjct: 490 LGHADNKRKLVPTCVTELIDHDF-IKVSCGWTLTVALSVSGTVYTMGSSIHGQLG-CPRA 547
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
+I+ +L GN Q +A G+ H ++T G +++WG+G +G L
Sbjct: 548 K------DKSINVVL--GNLTR----QFVKDIASGSHHVAVLTSFG-NVYTWGKGTNGQL 594
Query: 348 GTGKTIDFFAPAIV 361
G G D +P +V
Sbjct: 595 GLGDVRDRNSPVLV 608
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 37/208 (17%)
Query: 72 IKICSVKAG-----GMMSLAID-------NAGALWMWGNCPLPDSSTEGGFSLVSSFTPS 119
+K+ SV G ++ AID + G L+ WG+ D G P+
Sbjct: 446 MKVISVSCGPWHTAAIVETAIDRKFYNAKSCGKLFTWGD---GDKGRLGHADNKRKLVPT 502
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
V + H +KV+CG VAL +G Y+ G++ +GQLG R + K
Sbjct: 503 CVTELIDHDFIKVSCGWTLTVALSVSG--------TVYTMGSSIHGQLGC----PRAKDK 550
Query: 180 IIET-FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
I + V ++ GS H A+LT +T+G G NGQLG G +
Sbjct: 551 SINVVLGNLTRQFVKDIASGSHHVAVLTSF--------GNVYTWGKGTNGQLGLGDVRDR 602
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVV 266
P V+ L + + S+ CGL T+ +
Sbjct: 603 NSPVLVEPLGDRL-VESIACGLNLTAAI 629
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 11/91 (12%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A GS HV L S G Y +WG NGQLGLGD R P ++E
Sbjct: 564 VKDIASGSHHVAVLTSFGNVY--------TWGKGTNGQLGLGDVRDRNSPVLVEPLGDR- 614
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG TA + K + ++ C
Sbjct: 615 --LVESIACGLNLTAAICLHKEISLTDQTAC 643
Score = 38.5 bits (88), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
D+ WG GL + S +N DA+SP L+ D ++ GA H LVT
Sbjct: 259 DIMIWGAITGL---IDGSKNQN---DALSPKLL-----ESATMFDVQSISLGAKHAALVT 307
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +++ WG G SG LG ID P V
Sbjct: 308 RQG-EVFCWGNGNSGKLGLKVNIDIDHPKRV 337
>gi|297807279|ref|XP_002871523.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297317360|gb|EFH47782.1| ran GTPase binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 1075
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 112/244 (45%), Gaps = 41/244 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H V + GE++ SWG + G+LG G + +PK+I+ N +
Sbjct: 310 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNIQQPKLIDALNTTN 361
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG FH+ +T L +T+G G+ G LGHG S VP++V L
Sbjct: 362 ---IELVACGEFHSCAVT--------LSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLL 410
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +++ S+ CG +HT+VV+SAG ++++G + G+ L + P +
Sbjct: 411 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGV-----LGHGDKKSVFIPREVD---- 460
Query: 309 HGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDFFA 357
K V+ ACG HT V + KL++WG G G LG G
Sbjct: 461 -SLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLV 519
Query: 358 PAIV 361
P V
Sbjct: 520 PTCV 523
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 36/292 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G S A+ +G L+ WG D G + VS + P V + G V +ACG
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKG---DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 421
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GD++S P+ +++
Sbjct: 422 PYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDKKSVFIPREVDSLKG---LRTVRA 470
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V L +
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T ++++G V++ G P N D P + G
Sbjct: 531 F-CQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNSHADGKLPNRVEG------ 576
Query: 312 KFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K ++ACGA H ++T ++++WG+G +G LG G D +P +V
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDVDDRNSPTLV 627
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 110/271 (40%), Gaps = 48/271 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G + + +AG L+ +G +G F ++ S F P V
Sbjct: 413 IHVSSIACGPYHTAVVTSAGQLFTFG---------DGTFGVLGHGDKKSVFIPREVDSLK 463
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG G++E +L P
Sbjct: 464 GLRTVRAACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT +T G GQLG+
Sbjct: 521 TCVAALVEPN---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGNSHADGK 569
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
L P +V+ ++ + CG +H +V++S +V++WG KG N L + D
Sbjct: 570 L-PNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDVDDRN 622
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
SP L+ K + +ACG T V
Sbjct: 623 SPTLV-----ESLKDKQVKSIACGTNFTAAV 648
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 69/150 (46%), Gaps = 22/150 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTV 129
C V G +++A+ +G ++ G+ L +S +G P+ V H V
Sbjct: 531 FCQVACGHSLTVALTTSGHVYTMGSPVYGQLGNSHADGKL-------PNRVEGKLHKSFV 583
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
++ACG+ HV L S E Y +WG +NG+LG GD + R P ++E+
Sbjct: 584 EEIACGAYHVAVLTSRTEVY--------TWGKGSNGRLGHGDVDDRNSPTLVESLKDKQ- 634
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + + + M +SMC
Sbjct: 635 --VKSIACGTNFTAAVCIHRWASGMDQSMC 662
>gi|261405028|ref|YP_003241269.1| hypothetical protein GYMC10_1173 [Paenibacillus sp. Y412MC10]
gi|261281491|gb|ACX63462.1| Listeria/Bacterioides repeat protein [Paenibacillus sp. Y412MC10]
Length = 1280
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 102/232 (43%), Gaps = 39/232 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
K+ G H +LVS+GE YSWG + GQLG G +R P + + N
Sbjct: 37 KIVAGYYHTASLVSSGE--------VYSWGYGDRGQLGDGTWNTRTTPVMAKNLNH---- 84
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++ G + L + WT+G ENGQLG GT + P QV P
Sbjct: 85 -VIDIHSGVRSSMALRQ--------DGTVWTWGANENGQLGIGTITNVNAPAQV---PGL 132
Query: 251 VYLVSVDCGL-FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ ++ GL +H +S G VW+WG L ++ +N SP+L++G
Sbjct: 133 SGIKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTIQQN------SPVLVAG---- 182
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D +A G +++ + DG +W+WG SG LG G T D P V
Sbjct: 183 ---LSDVTAIAAGGYYSLALKSDG-TVWAWGVNGSGELGDGTTTDRHVPVQV 230
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 123/294 (41%), Gaps = 54/294 (18%)
Query: 66 TNHKAPIKI---CSVKA--GGMM--SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP 118
TN AP ++ +KA GG+ +A+ G +W WG D+ G + + +P
Sbjct: 121 TNVNAPAQVPGLSGIKAISGGLAYHGMALSENGTVWTWGKN---DNGELGNGTTIQQNSP 177
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
V V +A G + +AL S G ++WG N +G+LG G R P
Sbjct: 178 VLVAGLS--DVTAIAAGGYYSLALKSDG--------TVWAWGVNGSGELGDGTTTDRHVP 227
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ V + G H+ + + W +G G LG GT
Sbjct: 228 VQVAGLTD-----VMAIAAGGSHSLAIKQ--------DGTVWAWGNNTYGTLGDGTRTHR 274
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGD 296
P QV+ L ++V+V G +H+ V AG+VWSWG ++ LGL NAS
Sbjct: 275 TRPVQVRNLQ---HIVAVAGGGYHSLAVDRAGNVWSWGDNSQQQLGLNSNAS-------- 323
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
++ P+ + P + +++ G H+V + DG +W WG G +G G
Sbjct: 324 SLIPVPV-------PGIEHVREISAGGFHSVAMKKDG-TVWGWGYNSGGQIGDG 369
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 122/321 (38%), Gaps = 59/321 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + +G S+A+ G +W WG ++ G ++ + P+ V G
Sbjct: 85 VIDIHSGVRSSMALRQDGTVWTWGAN---ENGQLGIGTITNVNAPAQVPGLSG------- 134
Query: 134 CGSEHVVALVSAGETYKG----EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ +S G Y G E+ ++WG N+NG+LG G + P ++ +
Sbjct: 135 ------IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTIQQNSPVLVAGLSD--- 185
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + G +++ L + W +G+ +G+LG GTT VP QV L
Sbjct: 186 --VTAIAAGGYYSLALKS--------DGTVWAWGVNGSGELGDGTTTDRHVPVQVAGLTD 235
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNG 307
++++ G H+ + G VW+WG LG TR P+ +
Sbjct: 236 ---VMAIAAGGSHSLAIKQDGTVWAWGNNTYGTLGDGTRTHRTR--------PVQVR--- 281
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
Q V VA G H+ L D +WSWG LG P V P
Sbjct: 282 ----NLQHIVAVAGGGYHS-LAVDRAGNVWSWGDNSQQQLGLNSNASSLIPVPV---PGI 333
Query: 368 EEFKQDELNTGGLDDEIKTKD 388
E + E++ GG KD
Sbjct: 334 EHVR--EISAGGFHSVAMKKD 352
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 74/181 (40%), Gaps = 32/181 (17%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T+ P+++ ++ AGG SLAI G +W WGN T G +
Sbjct: 216 LGDGTTTDRHVPVQVAGLTDVMAIAAGGSHSLAIKQDGTVWAWGNNTY---GTLGDGTRT 272
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V + +V VA G H +A+ AG +SWG N+ QLGL
Sbjct: 273 HRTRPVQVRNL--QHIVAVAGGGYHSLAVDRAGN--------VWSWGDNSQQQLGLNSNA 322
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
S L P + V E++ G FH+ + + W +G GQ+G G
Sbjct: 323 SSLIPVPVPGIEH-----VREISAGGFHSVAMKK--------DGTVWGWGYNSGGQIGDG 369
Query: 234 T 234
T
Sbjct: 370 T 370
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 59 SLEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF-S 111
+L D ++T+ P++ I +V GG SLA+D AG +W WG+ +S + G S
Sbjct: 265 TLGDGTRTHRTRPVQVRNLQHIVAVAGGGYHSLAVDRAGNVWSWGD----NSQQQLGLNS 320
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
SS P PV V +++ G H VA+ +D + WG N+ GQ+G G
Sbjct: 321 NASSLIPVPVPGI--EHVREISAGGFHSVAM--------KKDGTVWGWGYNSGGQIGDG 369
>gi|440907021|gb|ELR57214.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Bos grunniens
mutus]
Length = 4874
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 452 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 508
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 509 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 560
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 561 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 608
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 609 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 660
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 661 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 704
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 705 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 758
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 759 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 811
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 812 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 844
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 127/285 (44%), Gaps = 38/285 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4096 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4152
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-------QDSPWAVYEVT 196
S G+ +++G + G+LGLG+ ++ P+ + +++ +V
Sbjct: 4153 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNNTLFFLQVA 4204
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
CG HT ++ SM W FG G+ G+LG G + + P++V L + + V
Sbjct: 4205 CGLNHTLAVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKV 4256
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
CG + ++ G V+++G ++ +GL P RN P+L G +D
Sbjct: 4257 ACGTQFSVALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED- 4307
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA GA HT+ + G +++WG G LG G T P +V
Sbjct: 4308 --VAVGAEHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4349
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 426 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 477
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 478 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 537
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 538 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 584
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 585 GGGDNGKLGHGDTNRVYKPKVI 606
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4251 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4304
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4305 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4356
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4357 ---VRQISAGRCHSAAWT 4371
>gi|431895932|gb|ELK05350.1| Putative E3 ubiquitin-protein ligase HERC1 [Pteropus alecto]
Length = 4850
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4083 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4139
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4140 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4188
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4189 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4240
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4241 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4289
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4290 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4326
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4228 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4281
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4282 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4333
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4334 ---VRQISAGRCHSAAWT 4348
>gi|47212899|emb|CAF90789.1| unnamed protein product [Tetraodon nigroviridis]
Length = 3089
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H+A K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 464 HRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 520
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 521 KVVVCVSAGYRHSAAVSEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 572
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 573 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 620
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 621 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 672
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V ++ G +H + ++ D ++++WG G G G +
Sbjct: 673 A-----TTRVVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 712
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-FHTALLTHRKRPNDMLESM 218
G + G+LGLGD ++ K + TF + GS HT T E
Sbjct: 438 GKGSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFT--------TEGE 488
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ VS G++++WG
Sbjct: 489 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 548
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
L S +RN P L+ G +V+CG++HT+ ++ DG +WS
Sbjct: 549 DFGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWS 595
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G +G LG G T + P +V
Sbjct: 596 FGGGDNGKLGHGDTNRVYKPKVV 618
>gi|355694483|gb|AER99684.1| hect domain and RLD 2 [Mustela putorius furo]
Length = 1082
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 84/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 288 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 344
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 345 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 393
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 394 VVDVACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 445
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 446 -LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 492
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 493 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 544
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 340 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 393
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 394 VVDVACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 444
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 445 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 495
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 496 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 547
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 548 --QGKKVN---RVACGSAHTL 563
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 118/268 (44%), Gaps = 35/268 (13%)
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
L+ +G ++ WG+ GG P+P V++ G + + A+ +
Sbjct: 195 LSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTA 251
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 252 DGK--------LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCLA 302
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
L+ E +++G E+G+LGHG P ++ L + + +V V G H++
Sbjct: 303 LSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHSA 353
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA- 323
V++AGD+++WG + L +++ D + P L+ H V VACG+
Sbjct: 354 CVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDVACGSG 402
Query: 324 -AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 403 DAQTLCLTDDD-TVWSWGDGDYGKLGRG 429
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 429 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 485
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y+WG N+ GQLG G +
Sbjct: 486 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNA 537
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 538 IQRPRLVAALQGKK---VNRVACGSAHT 562
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 204 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 241
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 242 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 300
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 301 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 347
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 348 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 386
>gi|405972531|gb|EKC37295.1| X-linked retinitis pigmentosa GTPase regulator [Crassostrea gigas]
Length = 663
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 132/279 (47%), Gaps = 42/279 (15%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ V G + ++ +G L+ +G G + SS P V +
Sbjct: 87 PEKVKVVACGRIHTIVATESGCLYTFG---ANGDGQLGVEDIPSSNCPVKV-ECEPRQYK 142
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A G++H VAL GE Y WG + GQLGLGD + + P ++ T N+
Sbjct: 143 ALAAGADHSVALTDDGE--------LYVWGGGSEGQLGLGDIDDKSTPTLLSTDNK---- 190
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V CG +HTA +T D+ E +TFG G+ G+LG GT V + +P+
Sbjct: 191 -VISVACGYYHTAFVT------DVGE--VFTFGEGDGGKLGQGTDYGKAVAPKKVNIPEK 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
SV CG HT V++ G V+++G E G G + +N+ +P+ ++
Sbjct: 242 AK--SVACGGSHTVVLTECGKVYTFG-EGGNGQLGH----KNKYFYCETPVWLN------ 288
Query: 311 PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
F+ V Q+A G HT LVT+ G +L+++G GR LG
Sbjct: 289 --FKHKVTQIAAGENHTALVTEKG-QLYTFGDGRHAKLG 324
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 56/268 (20%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
I +GA++ +G D+ P+ W G VACG EH + +G
Sbjct: 9 IPESGAIFTFGKSRFGDN------------LPNKFW-VRGDKAKSVACGDEHTALVTESG 55
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+++G N+ GQLG+ + + RP ++ P V V CG HT + T
Sbjct: 56 R--------LFTFGVNDWGQLGIDEVKVSTRPCCVKKLK---PEKVKVVACGRIHTIVAT 104
Query: 207 HRKRPNDMLESMC-WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTS 264
ES C +TFG +GQLG S+ P +V+ P QY L + G H+
Sbjct: 105 ---------ESGCLYTFGANGDGQLGVEDIPSSNCPVKVECEPRQYKALAA---GADHSV 152
Query: 265 VVSSAGD--VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
++ G+ VW G E LGL + D +P L+S + + VACG
Sbjct: 153 ALTDDGELYVWGGGSEGQLGL--------GDIDDKSTPTLLSTD-------NKVISVACG 197
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
HT VTD G +++++G G G LG G
Sbjct: 198 YYHTAFVTDVG-EVFTFGEGDGGKLGQG 224
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYL 253
V CG HTAL+T R +TFG+ + GQLG + + P VK+L P+ V +
Sbjct: 41 VACGDEHTALVTESGR--------LFTFGVNDWGQLGIDEVKVSTRPCCVKKLKPEKVKV 92
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V+ CG HT V + +G ++++G + L + + P+ +
Sbjct: 93 VA--CGRIHTIVATESGCLYTFGANG------DGQLGVEDIPSSNCPVKVEC-------- 136
Query: 314 QDPVQ---VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+P Q +A GA H+V +TDDG +L+ WG G G LG G D P ++
Sbjct: 137 -EPRQYKALAAGADHSVALTDDG-ELYVWGGGSEGQLGLGDIDDKSTPTLL 185
>gi|145357939|ref|NP_568268.3| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
gi|332004415|gb|AED91798.1| Regulator of chromosome condensation-like protein with FYVE zinc
finger domain-containing protein [Arabidopsis thaliana]
Length = 1075
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 53/250 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H V + GE++ SWG + G+LG G + +PK+I+ N +
Sbjct: 310 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNIQQPKLIDALNTTN 361
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG FH+ +T L +T+G G+ G LGHG S VP++V L
Sbjct: 362 ---IELVACGEFHSCAVT--------LSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLL 410
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +++ S+ CG +HT+VV+SAG ++++G + G+ + GD S +
Sbjct: 411 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVLGH--------GDKKSVFI------ 455
Query: 309 HGPKFQDP------VQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGK 351
P+ D V+ ACG HT V + KL++WG G G LG G
Sbjct: 456 --PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN 513
Query: 352 TIDFFAPAIV 361
P V
Sbjct: 514 KEPKLVPTCV 523
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 36/292 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G S A+ +G L+ WG D G + VS + P V + G V +ACG
Sbjct: 365 VACGEFHSCAVTLSGDLYTWGKG---DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 421
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GD++S P+ +++
Sbjct: 422 PYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDKKSVFIPREVDSLKG---LRTVRA 470
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V L +
Sbjct: 471 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 530
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T ++++G V++ G P N D +P + G
Sbjct: 531 F-CQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNSHADGKTPNRVEG------ 576
Query: 312 KFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K ++ACGA H ++T ++++WG+G +G LG G D +P +V
Sbjct: 577 KLHKSFVEEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDVDDRNSPTLV 627
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 48/271 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G + + +AG L+ +G +G F ++ S F P V
Sbjct: 413 IHVSSIACGPYHTAVVTSAGQLFTFG---------DGTFGVLGHGDKKSVFIPREVDSLK 463
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG G++E +L P
Sbjct: 464 GLRTVRAACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 520
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT +T G GQLG+ +
Sbjct: 521 TCVAALVEPN---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGN-SHADG 568
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
P +V+ ++ + CG +H +V++S +V++WG KG N L + D
Sbjct: 569 KTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDVDDRN 622
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
SP L+ K + +ACG T V
Sbjct: 623 SPTLV-----ESLKDKQVKSIACGTNFTAAV 648
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
C V G +++A+ +G ++ G+ P+ + G S TP+ V H V ++
Sbjct: 531 FCQVACGHSLTVALTTSGHVYTMGS-PV---YGQLGNSHADGKTPNRVEGKLHKSFVEEI 586
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG+ HV L S E Y +WG +NG+LG GD + R P ++E+ V
Sbjct: 587 ACGAYHVAVLTSRTEVY--------TWGKGSNGRLGHGDVDDRNSPTLVESLKDKQ---V 635
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMC 219
+ CG+ TA + + + M +SMC
Sbjct: 636 KSIACGTNFTAAVCIHRWASGMDQSMC 662
>gi|300122796|emb|CBK23812.2| unnamed protein product [Blastocystis hominis]
Length = 797
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 98/223 (43%), Gaps = 37/223 (16%)
Query: 59 SLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCP-----LPDSSTEGGFSLV 113
SL+ + HK ++ VK G S A+ G L+ WG+ P L + + +V
Sbjct: 128 SLQVERALRHK---RLAEVKTTGKASFALATTGELYSWGDGPAGELGLGEPVRQSQAEIV 184
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P +VKVACG+ HV+AL S G ++WG N GQLGLGDR
Sbjct: 185 VRLLP--------RQIVKVACGASHVLALDSEG--------ALFAWGGNQFGQLGLGDRR 228
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P + + + ++ G +A+L + WT GL E GQ G
Sbjct: 229 NRAEPVRVVALKKQH---IVDIAAGDGFSAVLDD--------HGVVWTMGLNELGQCGSN 277
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
++ +P V+++P S+ CG H + G+V +WG
Sbjct: 278 ASREVGIPSAVRQVPSAAQ--SLACGQSHVLALCKEGEVVTWG 318
>gi|313221390|emb|CBY32143.1| unnamed protein product [Oikopleura dioica]
Length = 560
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 43/296 (14%)
Query: 70 API-KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP+ KI + K S+AI G +W WG+ D G + +P +
Sbjct: 211 APVRKILTSKGSDGHSMAIGKNGQIWTWGD---GDYGKLGHGDSTTQKSPKLIEALASRV 267
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+V CG H A+ AG Y WG + G+LGLGD R P + + S
Sbjct: 268 IVDADCGHRHSAAVCDAGH--------LYMWGEGDYGRLGLGDALQRSVPVQVPDIREAS 319
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V CG HT +L+ R W+FG ENG+LGHG T P+ + L
Sbjct: 320 -----QVVCGFNHTVVLSTDGR-------TVWSFGAAENGKLGHGDTNRQFRPKIIDAL- 366
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA--ISPILISGN 306
Q + + + G ++ V+ G ++ WG LG N + D + P ++
Sbjct: 367 QGLTITQIAAGTQISAAVTREGALYVWGFGPCLG---------NGSSDETFMLPKVV--- 414
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI-DFFAPAIV 361
G + + +A G H V +T DG +++WG ++G GTG + + +P +V
Sbjct: 415 --RGLSGRVVIDIAIGENHVVALTKDGL-VFTWGNNQNGQCGTGSGMATYTSPQMV 467
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 84/244 (34%), Gaps = 68/244 (27%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I G S A+ +AG L+MWG D G + P V D +V
Sbjct: 268 IVDADCGHRHSAAVCDAGHLYMWGE---GDYGRLGLGDALQRSVPVQVPDIR--EASQVV 322
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII------------ 181
CG H V L + G T +S+GA NG+LG GD + RPKII
Sbjct: 323 CGFNHTVVLSTDGRT-------VWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIA 375
Query: 182 ------------------------------ETF------NQDSPWAVYEVTCGSFHTALL 205
ETF S V ++ G H L
Sbjct: 376 AGTQISAAVTREGALYVWGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAIGENHVVAL 435
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
T + + +T+G +NGQ G G+ + Q+ + + V G HT V
Sbjct: 436 TK--------DGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487
Query: 266 VSSA 269
S+A
Sbjct: 488 WSAA 491
>gi|14586365|emb|CAC42896.1| putative protein [Arabidopsis thaliana]
Length = 1062
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 53/250 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H V + GE++ SWG + G+LG G + +PK+I+ N +
Sbjct: 297 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNIQQPKLIDALNTTN 348
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG FH+ +T L +T+G G+ G LGHG S VP++V L
Sbjct: 349 ---IELVACGEFHSCAVT--------LSGDLYTWGKGDFGVLGHGNEVSHWVPKRVNFLL 397
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +++ S+ CG +HT+VV+SAG ++++G + G+ + GD S +
Sbjct: 398 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVLGH--------GDKKSVFI------ 442
Query: 309 HGPKFQDP------VQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGK 351
P+ D V+ ACG HT V + KL++WG G G LG G
Sbjct: 443 --PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGN 500
Query: 352 TIDFFAPAIV 361
P V
Sbjct: 501 KEPKLVPTCV 510
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 36/292 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G S A+ +G L+ WG D G + VS + P V + G V +ACG
Sbjct: 352 VACGEFHSCAVTLSGDLYTWGKG---DFGVLGHGNEVSHWVPKRVNFLLEGIHVSSIACG 408
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GD++S P+ +++
Sbjct: 409 PYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDKKSVFIPREVDSLKG---LRTVRA 457
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V L +
Sbjct: 458 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVPTCVAALVEPN 517
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T ++++G V++ G P N D +P + G
Sbjct: 518 F-CQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNSHADGKTPNRVEG------ 563
Query: 312 KFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K ++ACGA H ++T ++++WG+G +G LG G D +P +V
Sbjct: 564 KLHKSFVEEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDVDDRNSPTLV 614
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 48/271 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G + + +AG L+ +G +G F ++ S F P V
Sbjct: 400 IHVSSIACGPYHTAVVTSAGQLFTFG---------DGTFGVLGHGDKKSVFIPREVDSLK 450
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG G++E +L P
Sbjct: 451 GLRTVRAACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGNKEPKLVP 507
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT +T G GQLG+ +
Sbjct: 508 TCVAALVEPN---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGN-SHADG 555
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
P +V+ ++ + CG +H +V++S +V++WG KG N L + D
Sbjct: 556 KTPNRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDVDDRN 609
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
SP L+ K + +ACG T V
Sbjct: 610 SPTLV-----ESLKDKQVKSIACGTNFTAAV 635
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
C V G +++A+ +G ++ G+ P+ + G S TP+ V H V ++
Sbjct: 518 FCQVACGHSLTVALTTSGHVYTMGS-PV---YGQLGNSHADGKTPNRVEGKLHKSFVEEI 573
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG+ HV L S E Y +WG +NG+LG GD + R P ++E+ V
Sbjct: 574 ACGAYHVAVLTSRTEVY--------TWGKGSNGRLGHGDVDDRNSPTLVESLKDKQ---V 622
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMC 219
+ CG+ TA + + + M +SMC
Sbjct: 623 KSIACGTNFTAAVCIHRWASGMDQSMC 649
>gi|328784403|ref|XP_395217.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
mellifera]
Length = 1081
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 128/296 (43%), Gaps = 54/296 (18%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKVACG 135
G +LAI+ G L+ WG S+TEG L S +P V VV++ACG
Sbjct: 119 GAYHTLAINEWGQLFSWG------SNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYE 194
+H AL + GE YSWG+N+ GQLGLG D + ++PK I F P A
Sbjct: 173 MKHAFALTNNGE--------LYSWGSNSEGQLGLGTDTKYEIKPKFISAF-IGIPIAF-- 221
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVY 252
+ CG +H+ ++ FG G+N GQLG TQ +P Q++ L Q
Sbjct: 222 IACGGYHSIAISKSGA----------VFGWGKNTFGQLGLNDTQDRNLPCQLQTL-QNAK 270
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ CG + ++ G V++ G + G G N L R S +
Sbjct: 271 ICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTV------- 323
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG HT+ + ++++WG G +G LG T P +V P
Sbjct: 324 --------TQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 37/208 (17%)
Query: 149 YKGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+K +D+ C WG+ +G+LGLG + E+ L P+ ++ F + + + ++ CG +T ++T
Sbjct: 23 HKKKDMFC--WGSTIHGELGLGGIEDENILIPRELD-FKKAA--EIQQIACGENYTVVIT 77
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGH--GTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++ G + GQLGH G + L+P L +V+ + CG +HT
Sbjct: 78 QIGE--------IYSCGNNDYGQLGHEKGRKRLQLIPG----LDAFVFKKAA-CGAYHTL 124
Query: 265 VVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
++ G ++SWG E LGL + SP ++ G VQ+ACG
Sbjct: 125 AINEWGQLFSWGSNTEGQLGLNSKNFMES-------SPRMVKTLGT-----SVVVQIACG 172
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
H +T++G +L+SWG G LG G
Sbjct: 173 MKHAFALTNNG-ELYSWGSNSEGQLGLG 199
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 102/233 (43%), Gaps = 38/233 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ ++ACG + V + GE YS G N+ GQ LG + R R ++I +
Sbjct: 63 IQQIACGENYTVVITQIGEI--------YSCGNNDYGQ--LGHEKGRKRLQLIPGLD--- 109
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 247
+ + CG++HT + N+ + W G GQLG + P VK L
Sbjct: 110 AFVFKKAACGAYHTLAI------NEWGQLFSW--GSNTEGQLGLNSKNFMESSPRMVKTL 161
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISG 305
V +V + CG+ H +++ G+++SWG E LGL + T+ E I P IS
Sbjct: 162 GTSV-VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTD---TKYE----IKPKFISA 213
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
F +ACG H++ ++ G ++ WG+ G LG T D P
Sbjct: 214 FIGIPIAF-----IACGGYHSIAISKSG-AVFGWGKNTFGQLGLNDTQDRNLP 260
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHT 128
I I + GG S+AI +GA++ WG +T G L + P +
Sbjct: 217 IPIAFIACGGYHSIAISKSGAVFGWG------KNTFGQLGLNDTQDRNLPCQLQTLQNAK 270
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ ACG E V L G ++ GA GQLG G + + P+ + +
Sbjct: 271 ICYAACGEEFSVFLTVDGGV--------FTCGAGMYGQLGHGSNSNEILPRQVMELMGST 322
Query: 189 PWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V +++CG HT AL+ R R + +GLG GQLG+ +T+S P+ V
Sbjct: 323 ---VTQISCGKRHTLALVPSRGR--------VYAWGLGGAGQLGNHSTRSVTTPQVV 368
>gi|113205375|gb|AAU93591.2| Zinc finger protein, putative [Solanum demissum]
Length = 1127
Score = 92.8 bits (229), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF-HGHTVVKVACG 135
+ G S A+ ++G L+ WG+ S G S S + P V G V V+CG
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGD-GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCG 423
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG + ++G G LG GDR + P+ +ETFN +V
Sbjct: 424 PWHTALITSAGRLF--------TFGDGTFGALGHGDRSGCITPREVETFNG---LKTLKV 472
Query: 196 TCGSFHTALLTH-----RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
CG +HTA + RP+D +T+G G+ G+LGHG + L P+ + L
Sbjct: 473 ACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDK 532
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGME-KGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V C T +++ G V++ G G CP A + +SPI +
Sbjct: 533 SF-SEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLA--------NGMSPICVED---- 579
Query: 310 GPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D +++CG+ H ++T ++++WG+G +G LG G + P +V
Sbjct: 580 --YLVDSTVEEISCGSHHVAVLTSR-TEVYTWGKGENGQLGHGDCENKCTPTLV 630
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 42/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG+ H + + GE + SWG G+LG G PK+I+ F
Sbjct: 310 VQNISCGNRHAMLVTKQGEAF--------SWGEEAGGRLGHGAETDVSHPKLIKNFKG-- 359
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG +H+ +T D+ W G +G LGH + S +P++V L
Sbjct: 360 -MNVELIACGEYHSCAVTS---SGDL---YTWGDGAKSSGLLGHRSEASHWIPKKVCGLM 412
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NG 307
+ + + V CG +HT++++SAG ++++G + G +L + I+P + NG
Sbjct: 413 EGLRVSHVSCGPWHTALITSAGRLFTFG-DGTFG-----ALGHGDRSGCITPREVETFNG 466
Query: 308 PHGPKFQDPVQVACGAAHTVLVTD------------DGYKLWSWGRGRSGVLGTGKTIDF 355
++VACG HT V + L++WG G G LG G
Sbjct: 467 ------LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPR 520
Query: 356 FAPAIV 361
AP +
Sbjct: 521 LAPQCI 526
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH-GHTVVKVACGSEHVVA 141
M++A+ G ++ G+ + + G L + +P V D+ TV +++CGS HV
Sbjct: 543 MTVALTTTGRVYTMGS----NVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAV 598
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-F 200
L S E Y +WG NGQLG GD E++ P +++ V + CGS F
Sbjct: 599 LTSRTEVY--------TWGKGENGQLGHGDCENKCTPTLVDILRDKQ---VKRIVCGSNF 647
Query: 201 HTALLTH 207
A+ H
Sbjct: 648 SAAICVH 654
>gi|348676412|gb|EGZ16230.1| hypothetical protein PHYSODRAFT_445559 [Phytophthora sojae]
Length = 2434
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 138/306 (45%), Gaps = 42/306 (13%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V V V+C H V ++ E G+ + Y++G N+ GQLG D
Sbjct: 559 SESVPKIVRSLENRIVRLVSCSYYHTV--MACEEDGSGQQYL-YTFGRNDYGQLGHNDSI 615
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P+ +E V V CG +HT ++T + + FG + GQLG
Sbjct: 616 DRKVPQHVEAMGDQH---VVSVACGQYHTMVVTATGK--------AFAFGKNDYGQLGID 664
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASL 289
+ ++ LVP QV+ + + + CG +HT V+ S ++++G + GLG NAS
Sbjct: 665 SMENQLVPVQVRAGLEKHECLEIRCGYYHTIVLCSGAHLFAFGRNDYGQLGLGRA-NASS 723
Query: 290 TRN----EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
T N + + + ++ G +D V+ ACG HTV V+D+G ++ +GR G
Sbjct: 724 TANLQLQQQRFSYARLIEELEG------KDIVRFACGCYHTVAVSDNGV-MYVFGRNNHG 776
Query: 346 VLGTGKTI---------DFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERD 396
LGTG T DF + L + F + TGG +DE +D G ++ +
Sbjct: 777 QLGTGDTNERVYPFPIDDFVGKRVAL---VAAGFYHTVVLTGGKEDEKNDQDAAGNDKGE 833
Query: 397 EKLSSA 402
S+A
Sbjct: 834 GSQSTA 839
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 102/237 (43%), Gaps = 33/237 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRL--RPKIIETF 184
++++ G+EH +AL T G+ L C G N+NGQ G G R S L PK+
Sbjct: 468 IIQIGAGNEHTIAL-----TVDGKVLTC---GYNDNGQCGQGGTARVSHLCEMPKM---- 515
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
D+ + G HT L+T ++ T G GQLGHG T S VP+ V
Sbjct: 516 -GDNAISQVHAYNGCEHTILVT--------MDGRAATCGYNYRGQLGHGNTASESVPKIV 566
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ L + + V C +HT V++ D G L N++ D P +
Sbjct: 567 RSLENRIVRL-VSCSYYHT-VMACEEDGSGQQYLYTFGRNDYGQLGHNDSIDRKVPQHVE 624
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G Q V VACG HT++VT G K +++G+ G LG + P V
Sbjct: 625 AMGD-----QHVVSVACGQYHTMVVTATG-KAFAFGKNDYGQLGIDSMENQLVPVQV 675
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 59/146 (40%), Gaps = 19/146 (13%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W+ G G+LGHG T S E+++ L Q ++ + G HT ++ G V + G
Sbjct: 436 WSCGQNSYGELGHGDTASRKSFERIESLQQK-EIIQIGAGNEHTIALTVDGKVLTCGYND 494
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD----PVQVACGAAHTVLVTDDGYK 335
G C R +S + PK D V G HT+LVT DG +
Sbjct: 495 N-GQCGQGGTAR------VSHLC------EMPKMGDNAISQVHAYNGCEHTILVTMDG-R 540
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G G LG G T P IV
Sbjct: 541 AATCGYNYRGQLGHGNTASESVPKIV 566
>gi|218782845|ref|YP_002434163.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218764229|gb|ACL06695.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 437
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 142/333 (42%), Gaps = 52/333 (15%)
Query: 43 LVPCVIEQFLTIG---------APDSLEDDSKTNHKAPIKICSVKAGG-MMSLAIDNAGA 92
L+P ++ L +G P S + AP + + AGG SL + N G
Sbjct: 16 LIPAIVVTILLLGCLACTSSQPRPSEEARTSARHRNAPHPVWGIAAGGGYHSLVVKNDGT 75
Query: 93 LWMWGNCPLPDSSTEGGFSL-VSSFTPSPVWDFHG---HTVVKVACGSEHVVALVSAGET 148
+W WG+ +SS + G +S +P V G + V+KVA G H +AL + GE
Sbjct: 76 VWAWGD----NSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGE- 130
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
++WG N+ GQLG G R P + + + CG H+ +
Sbjct: 131 -------VWTWGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVAS- 182
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV-SVDCGLFHTSVVS 267
+ W +G +GQ+G GT ++ P QV + + V +V G H+ +S
Sbjct: 183 -------DGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGKPLAGVKAVAAGFAHSLALS 235
Query: 268 SAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILI--SGNGPHGPKFQDPVQVACGA 323
G VW+WG + LG C + D +P+ + S + P + V +A G
Sbjct: 236 VDGTVWAWGDNEFGQLGDCSDY--------DRKAPVQVMHSVDRP----LDNVVAIAAGR 283
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
A ++ +T DG ++W+WG G LG G F
Sbjct: 284 AFSLALTRDG-EVWAWGNNGVGQLGMGPHNGFV 315
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 108/267 (40%), Gaps = 43/267 (16%)
Query: 102 PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
P S E S P PVW A G H + + + D ++WG
Sbjct: 37 PRPSEEARTSARHRNAPHPVWGI-------AAGGGYHSLVVKN--------DGTVWAWGD 81
Query: 162 NNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
N++GQLG+G ++ L P + + V +V G H+ LT + WT
Sbjct: 82 NSSGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAGERHSLALTAKGE--------VWT 133
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+G GQLG G P +V+ + +V CG H+ V+S G VW+WG
Sbjct: 134 WGDNSKGQLGDGFFYERRSPVKVRHIRTNPLENIVGAACGGKHSLAVASDGTVWAWGSNS 193
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV----QVACGAAHTVLVTDDGYK 335
G + +L + +P + +F P+ VA G AH++ ++ DG
Sbjct: 194 D-GQIGDGTLKNRQ-----NPRQVM-------RFGKPLAGVKAVAAGFAHSLALSVDG-T 239
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+W+WG G LG D AP V+
Sbjct: 240 VWAWGDNEFGQLGDCSDYDRKAPVQVM 266
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 101/387 (26%), Positives = 153/387 (39%), Gaps = 85/387 (21%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK--APIK-ICSVKAG 80
Y SL DG + G NS L IG + + HK AP+ + V AG
Sbjct: 65 YHSLVVKNDGTVWAWGDNS------SGQLGIGTNKASLSPVRVMHKSGAPLNGVLKVAAG 118
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-----VVKVACG 135
SLA+ G +W WG+ +S + G SPV H T +V ACG
Sbjct: 119 ERHSLALTAKGEVWTWGD----NSKGQLGDGFFYERR-SPVKVRHIRTNPLENIVGAACG 173
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA-VYE 194
+H +A+ S D ++WG+N++GQ+G G ++R P+ + F + P A V
Sbjct: 174 GKHSLAVAS--------DGTVWAWGSNSDGQIGDGTLKNRQNPRQVMRFGK--PLAGVKA 223
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-- 252
V G H+ L+ ++ W +G E GQLG + P QV
Sbjct: 224 VAAGFAHSLALS--------VDGTVWAWGDNEFGQLGDCSDYDRKAPVQVMHSVDRPLDN 275
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRN----EAGDAISPI----L 302
+V++ G + ++ G+VW+WG LG+ P+ R+ A + + P+
Sbjct: 276 VVAIAAGRAFSLALTRDGEVWAWGNNGVGQLGMGPHNGFVRDPLPVRAANGV-PLKGVRA 334
Query: 303 ISGNGPHG------------------------------PKFQDPVQVACGAA---HTVLV 329
I+ NG H P V C AA H++ V
Sbjct: 335 ITANGRHSLALMNDGSVLAWGAGDRGQLGQGAQNHEDHPTLASLHSVICLAAGRYHSLAV 394
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFF 356
++G L +WG + G LG GK F
Sbjct: 395 AENGAVL-AWGDNQKGQLGIGKADKNF 420
>gi|301121999|ref|XP_002908726.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262099488|gb|EEY57540.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 2298
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 136/315 (43%), Gaps = 45/315 (14%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P + V V+C H V G Y++G N+ GQLG D
Sbjct: 498 SESVPKIIRSLENKIVRLVSCSYYHTVLACEDGNLQN-----LYTFGRNDYGQLGHNDSI 552
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P+ +E S + V CG +HT ++T + + FG + GQLG
Sbjct: 553 DRKIPQFVEAL---SDQQIVSVACGQYHTMVVT--------VSGKAFAFGKNDYGQLGID 601
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASL 289
T ++ L P QV+ + + + CG +HT + S ++++G + GLG NAS
Sbjct: 602 TMENQLAPVQVRGGLERQECLEIRCGYYHTIALCSGAHLFAFGRNDYGQLGLGR-SNASS 660
Query: 290 TRN----EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
T N + + + ++ G +D V++ACG HT+ V+D+G ++ +GR G
Sbjct: 661 TSNLQLQQQRFSNARLIDELEG------KDIVRIACGCYHTIAVSDNGV-MYVFGRNNHG 713
Query: 346 VLGTGKTI---------DFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERD 396
LGTG T DF I L + F + TGG +D+ +D G ++ +
Sbjct: 714 QLGTGDTTERVYPFPIDDFVGKRIAL---VAAGFYHTVVLTGGKEDDKNEQD-SGNDKEE 769
Query: 397 EKLSSAMEEMKLLQS 411
SS + +L S
Sbjct: 770 VSASSGITHSTILSS 784
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 99/235 (42%), Gaps = 32/235 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQ 186
++++ G+EH V L + G+ + + G N+NGQ G G R S L E
Sbjct: 408 IIQIGAGNEHTVVLTADGKVF--------TCGYNDNGQCGQGGTARVSHLS----EIPKM 455
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
DS + G HT L++ R T G GQLGHG T S VP+ ++
Sbjct: 456 DSGSSQAHAYNGCEHTILVSTDGR--------VATCGYNYRGQLGHGNTTSESVPKIIRS 507
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L + + V C +HT + G++ + G L N++ D P +
Sbjct: 508 LENKIVRL-VSCSYYHTVLACEDGNLQNL---YTFGRNDYGQLGHNDSIDRKIPQFVEAL 563
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q V VACG HT++VT G K +++G+ G LG + AP V
Sbjct: 564 SD-----QQIVSVACGQYHTMVVTVSG-KAFAFGKNDYGQLGIDTMENQLAPVQV 612
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 96/232 (41%), Gaps = 39/232 (16%)
Query: 141 ALVSAGETYKGED---LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
A VS T ED +S G N+ G+LG GD SR + I+ Q + ++
Sbjct: 357 AFVSNDTTIFHEDEGEREVWSCGQNSYGELGHGDTASRKSFERIQALQQKE---IIQIGA 413
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
G+ HT +LT + +T G +NGQ G G T ++ ++
Sbjct: 414 GNEHTVVLT--------ADGKVFTCGYNDNGQCGQGGTARVSHLSEIPKMDSGSSQAHAY 465
Query: 258 CGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
G HT +VS+ G V + G + G G N +++ I+ S
Sbjct: 466 NGCEHTILVSTDGRVATCGYNYRGQLGHG---------NTTSESVPKIIRS--------L 508
Query: 314 QDPVQ--VACGAAHTVLVTDDG--YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ + V+C HTVL +DG L+++GR G LG +ID P V
Sbjct: 509 ENKIVRLVSCSYYHTVLACEDGNLQNLYTFGRNDYGQLGHNDSIDRKIPQFV 560
>gi|255081710|ref|XP_002508077.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
gi|226523353|gb|ACO69335.1| E3 ubiquitin-protein ligase [Micromonas sp. RCC299]
Length = 1348
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 127/305 (41%), Gaps = 43/305 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT---VV 130
+ V G S+A+ +AG ++ +G+C + L + P + V
Sbjct: 210 VTHVAGGARHSVAVTSAGEVYAFGDCSGEGKALSAPTRLREAVIDPPEVTATTNAMPRVA 269
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG---DRESRLRPKIIETFNQD 187
VACG H A+ ++G V SWG GQLG G D S+ K + D
Sbjct: 270 TVACGQRHCAAVTTSG--------VLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRAD 321
Query: 188 S---PWAV-------YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+ P V V CG+ HT LT R ++FG G G LGHG +
Sbjct: 322 ASMMPRLVGSGHVKFTSVACGAGHTLALTANGR--------VFSFGRGAFGALGHGDRLN 373
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
VP V L V + + G H++ +S++G V++WG K +L + +
Sbjct: 374 CDVPRLVDAL-WGVGVAQIAAGDNHSASLSASGRVYTWGRGK------YGALGHRDVDNR 426
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK-LWSWGRGRSGVLGTGKTIDFF 356
P + G + + Q+ACG HT+ + G L +WGRG SG GTG T D
Sbjct: 427 SRPTPVQALDDAGVRCE---QIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATADVL 483
Query: 357 APAIV 361
P I+
Sbjct: 484 TPTII 488
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 122/297 (41%), Gaps = 55/297 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN--------CPLPDSSTEG-GFSLV-----SSFTP 118
++ +V G A+ +G L WGN P DSS++G SL+ +S P
Sbjct: 267 RVATVACGQRHCAAVTTSGVLLSWGNEEFGQLGQGPPRDSSSKGDAKSLIRRRADASMMP 326
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
V H VACG+ H +AL + G + S+G G LG GDR + P
Sbjct: 327 RLVGSGH-VKFTSVACGAGHTLALTANGRVF--------SFGRGAFGALGHGDRLNCDVP 377
Query: 179 KIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
+++ D+ W V ++ G H+A L+ R +T+G G+ G LGH
Sbjct: 378 RLV-----DALWGVGVAQIAAGDNHSASLSASGR--------VYTWGRGKYGALGHRDVD 424
Query: 237 SALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGD----VWSWGMEKGLGLCPNASLTR 291
+ P V+ L V + CG HT ++ G W G G A
Sbjct: 425 NRSRPTPVQALDDAGVRCEQIACGGDHTLAIAGGGSGVLLAWGRGSSGPAGTGATA---- 480
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
D ++P +I K Q++ G+ H+V VT+ G +++WG G LG
Sbjct: 481 ----DVLTPTIIDRALLGDEKV---FQISAGSKHSVAVTEGGC-VYTWGARTQGQLG 529
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 26/217 (11%)
Query: 22 ICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKA--PIKICSVKA 79
+ +TS+ C L + + + F +G D L D A + + + A
Sbjct: 334 VKFTSVACGAGHTLALTANGRVFSFGRGAFGALGHGDRLNCDVPRLVDALWGVGVAQIAA 393
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV--WDFHGHTVVKVACGSE 137
G S ++ +G ++ WG G + + P+PV D G ++ACG +
Sbjct: 394 GDNHSASLSASGRVYTWGRGKY---GALGHRDVDNRSRPTPVQALDDAGVRCEQIACGGD 450
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE-TFNQDSPWAVYEVT 196
H +A+ G V +WG ++G G G L P II+ D V++++
Sbjct: 451 HTLAIAGGGSG------VLLAWGRGSSGPAGTGATADVLTPTIIDRALLGDE--KVFQIS 502
Query: 197 CGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQLGH 232
GS H+ +T E C +T+G GQLGH
Sbjct: 503 AGSKHSVAVT---------EGGCVYTWGARTQGQLGH 530
>gi|257196144|ref|NP_663592.3| hect domain and RCC1-like domain 1 [Mus musculus]
Length = 4859
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4092 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4149 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4197
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4198 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4249
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4250 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4298
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4299 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4290
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4291 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4342
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4343 ---IRQISAGRCHSAAWT 4357
>gi|74213730|dbj|BAC39029.2| unnamed protein product [Mus musculus]
Length = 1203
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
>gi|148694174|gb|EDL26121.1| mCG130390 [Mus musculus]
Length = 4870
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4103 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4159
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4160 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4208
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4209 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4260
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4261 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4309
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4310 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4346
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4248 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4301
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4302 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4353
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4354 ---IRQISAGRCHSAAWT 4368
>gi|188038845|gb|ACD47036.1| ASL1/Herc2 fusion protein [Mus musculus]
Length = 4746
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 2958 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIQALKTKRIRD 3014
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A GS H L S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3015 IAYGSSHSAPLTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3063
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3064 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3116
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3117 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3168
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3169 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3214
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3951 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4007
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4008 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4056
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4057 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4107
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4108 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4155
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4156 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4207
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 393 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 444
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 445 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 496
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 497 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 549
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 550 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 601
Query: 349 TG 350
G
Sbjct: 602 HG 603
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S + ++G L+ WG L + G + P V GH V++V
Sbjct: 3011 RIRDIAYGSSHSAPLTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3067
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E + +SWG + G+LG G E P+ IE N V
Sbjct: 3068 ACGSRDAQTLALTDEG------LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GV 3118
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT + WT+G G+ +LGHG+ P+ V+ L +
Sbjct: 3119 CQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKK 3169
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V G H V+ +G V++WG + G N + T N P L+ G +
Sbjct: 3170 IVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLE 3218
Query: 313 FQDPVQVACGAAHTV 327
Q +VACG++H+V
Sbjct: 3219 GQKITRVACGSSHSV 3233
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2909 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 2964
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++I+ +
Sbjct: 2965 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIQALKTKR---IR 3013
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ GS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3014 DIAYGSSHSAPLTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3064
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3065 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3115
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3116 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3162
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4003 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4056
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4057 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4107
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4108 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4158
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4159 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4210
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4211 --QGKKVN---RVACGSAHTL 4226
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3857 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3913
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3914 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3964
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3965 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4015
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4016 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4064
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4065 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4092
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3118 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3174
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3175 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3223
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3224 RVACGSSHSVAWT 3236
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4098 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4154
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4155 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4206
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4207 VAALQGKK---VNRVACGSAHT 4225
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 523 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 579
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 580 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 628
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H +LT E W G N Q H T PE P ++V +
Sbjct: 629 STHCLVLTEDS------EVHSW----GSNDQCQHFDTLGVTKPEPTA-FPGLDSKHIVGI 677
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 678 ACGPAQSFAWSSCSE-WSIGLR 698
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 428 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 487
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 488 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 535
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 536 QVWSWGDGDYGKLGRGGSDGCKTPKLI 562
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3867 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3904
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3905 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 3963
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 3964 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4010
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4011 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4049
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 377 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 435
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 436 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 488
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 489 GNYGRLGHGSSEDEAIPMLV 508
>gi|114598774|ref|XP_001175007.1| PREDICTED: E3 ISG15--protein ligase HERC5-like, partial [Pan
troglodytes]
Length = 207
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 65/187 (34%), Positives = 89/187 (47%), Gaps = 22/187 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 43 KIIQITCGDYHSLALSKGGELFAWGQNLHGQLGV--GRKFPSTTTPQIVEHLAGVPLAQI 100
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G Y SWG N GQLGLG ES+ P +IE + V
Sbjct: 101 SAGEAHSMALSMSGNIY--------SWGKNEFGQLGLGHTESKDYPSLIEGLDNQK---V 149
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL +Y
Sbjct: 150 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVEY-R 200
Query: 253 LVSVDCG 259
+ + CG
Sbjct: 201 VTQIACG 207
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++TCG +H+ L+ E W G +GQLG G + Q+ E V
Sbjct: 44 IIQITCGDYHSLALSKGG------ELFAW--GQNLHGQLGVGRKFPSTTTPQIVEHLAGV 95
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
L + G H+ +S +G+++SWG + L E+ D P LI G
Sbjct: 96 PLAQISAGEAHSMALSMSGNIYSWGKNE----FGQLGLGHTESKDY--PSLIEGLDNQKV 149
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+F VACG +H+ L+T DG L+++G G+ G LG T + P +V
Sbjct: 150 EF-----VACGGSHSALLTQDGL-LFTFGAGKHGQLGHNSTQNELRPCLV 193
>gi|414585739|tpg|DAA36310.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1044
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 135/299 (45%), Gaps = 38/299 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLP---DSSTEGGFSLVSSFTPSPVWDFHG 126
A + + V G + A+ +G L WG P DS + F+P G
Sbjct: 314 ASLHVKDVAYGSKHTCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSP-----LDG 368
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+VVK+ACG H + S+G+ Y++G G LG GD + RPK +E+
Sbjct: 369 ISVVKIACGPWHTAIITSSGQ--------LYTYGDGTFGVLGHGDTQGTTRPKEVESLKG 420
Query: 187 DSPWAVYEVTCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V V CG +HTA + ++ S +T+G + G+LGH + L+P V
Sbjct: 421 SR---VKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCV 477
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPIL 302
L Y + + V CG T +S G V++ G M LG P+A + A+ +L
Sbjct: 478 DSLTDYDF-IQVSCGTALTVALSVTGVVFTSGSSMHGQLG-NPHAD---GKTVSAVEGLL 532
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
S H ++ G++H +VT +G K+++WG+G+ G LG G ++ P +V
Sbjct: 533 KSEFVRH---------ISSGSSHVAVVTTNG-KVFTWGKGKEGQLGLGDFLNRSTPTLV 581
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 62/149 (41%), Gaps = 43/149 (28%)
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILIS-------- 304
S+ CG H ++++ G+V+SWG E +G N ++R + +++ + +
Sbjct: 268 SIACGETHAAIITKQGEVYSWGNESSGRIGNQVNIKVSRPKVVQSLASLHVKDVAYGSKH 327
Query: 305 -------------GNGPH-------------GPKFQDP------VQVACGAAHTVLVTDD 332
G GP+ K P V++ACG HT ++T
Sbjct: 328 TCAVTVSGELIEWGEGPYMGQLDSYARNQWFPHKLFSPLDGISVVKIACGPWHTAIITSS 387
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +L+++G G GVLG G T P V
Sbjct: 388 G-QLYTYGDGTFGVLGHGDTQGTTRPKEV 415
Score = 41.2 bits (95), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 54/244 (22%), Positives = 95/244 (38%), Gaps = 59/244 (24%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I + + G + I ++G L+ +G+ L T+G + P V G
Sbjct: 369 ISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQG------TTRPKEVESLKGSR 422
Query: 129 VVKVACGSEHVVALVSAGETYKGED--LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V VACG H A+V +K ++WG + G+LG D++ +L P +++
Sbjct: 423 VKCVACGPWHTAAIVEVISDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL-- 480
Query: 187 DSPWAVYEVTCGSFHTALLT------------HRKRPN------------DMLES----- 217
+ + +V+CG+ T L+ H + N +L+S
Sbjct: 481 -TDYDFIQVSCGTALTVALSVTGVVFTSGSSMHGQLGNPHADGKTVSAVEGLLKSEFVRH 539
Query: 218 ---------------MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T+G G+ GQLG G + P V L + ++ S+ CG +
Sbjct: 540 ISSGSSHVAVVTTNGKVFTWGKGKEGQLGLGDFLNRSTPTLVDAL-EGRHVESLSCGYNY 598
Query: 263 TSVV 266
T+ V
Sbjct: 599 TAAV 602
>gi|142942429|gb|ABO93003.1| putative regulator of chromosome condensation RCC1 [Solanum
tuberosum]
Length = 951
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 130/294 (44%), Gaps = 37/294 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF-HGHTVVKVACG 135
+ G S A+ ++G L+ WG+ S G S S + P V G V V+CG
Sbjct: 365 IACGEYHSCAVTSSGDLYTWGD-GAKSSGLLGHRSEASHWIPKKVCGLMEGLRVSHVSCG 423
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG + ++G G LG GDR + P+ +ETFN +V
Sbjct: 424 PWHTALITSAGRLF--------TFGDGTFGALGHGDRSGCITPREVETFNG---LKTLKV 472
Query: 196 TCGSFHTALLTH-----RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
CG +HTA + RP+D +T+G G+ G+LGHG + L P+ + L
Sbjct: 473 ACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPRLAPQCITALVDK 532
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGME-KGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V C T +++ G V++ G G CP A + +SPI +
Sbjct: 533 SF-SEVACSYAMTVALTTTGRVYTMGSNVYGQLGCPLA--------NGMSPICVED---- 579
Query: 310 GPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D +++CG+ H ++T ++++WG+G +G LG G + P +V
Sbjct: 580 --YLVDSTVEEISCGSHHVAVLTSR-TEVYTWGKGENGQLGHGDCENKCTPTLV 630
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 107/246 (43%), Gaps = 42/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG+ H + + GE + SWG G+LG G PK+I+ F
Sbjct: 310 VQNISCGNRHAMLVTKQGEAF--------SWGEEAGGRLGHGAETDVSHPKLIKNFKG-- 359
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG +H+ +T D+ W G +G LGH + S +P++V L
Sbjct: 360 -MNVELIACGEYHSCAVTS---SGDL---YTWGDGAKSSGLLGHRSEASHWIPKKVCGLM 412
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NG 307
+ + + V CG +HT++++SAG ++++G + G +L + I+P + NG
Sbjct: 413 EGLRVSHVSCGPWHTALITSAGRLFTFG-DGTFG-----ALGHGDRSGCITPREVETFNG 466
Query: 308 PHGPKFQDPVQVACGAAHTVLVTD------------DGYKLWSWGRGRSGVLGTGKTIDF 355
++VACG HT V + L++WG G G LG G
Sbjct: 467 ------LKTLKVACGVWHTAAVVELMSGLDSRPSDAPSGTLFTWGDGDKGKLGHGDNKPR 520
Query: 356 FAPAIV 361
AP +
Sbjct: 521 LAPQCI 526
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 60/127 (47%), Gaps = 17/127 (13%)
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH-GHTVVKVACGSEHVVA 141
M++A+ G ++ G+ + + G L + +P V D+ TV +++CGS HV
Sbjct: 543 MTVALTTTGRVYTMGS----NVYGQLGCPLANGMSPICVEDYLVDSTVEEISCGSHHVAV 598
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-F 200
L S E Y +WG NGQLG GD E++ P +++ V + CGS F
Sbjct: 599 LTSRTEVY--------TWGKGENGQLGHGDCENKCTPTLVDILRDKQ---VKRIVCGSNF 647
Query: 201 HTALLTH 207
A+ H
Sbjct: 648 SAAICVH 654
>gi|222619121|gb|EEE55253.1| hypothetical protein OsJ_03147 [Oryza sativa Japonica Group]
Length = 954
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 50/299 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK 131
+ G + A+ +G L+ WG N L TE VS + P V G V+
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTE-----VSYWLPKKVSGPLEGLQVLS 367
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H S+G+ Y++G G LG GDRE+ PK +E S +
Sbjct: 368 VACGSWHSALTTSSGK--------LYTFGDGTFGVLGHGDRETLAYPKEVEAL---SGFK 416
Query: 192 VYEVTCGSFHTALL---THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V CG +H+A + T++ N M + + +T+G G+ +LGHG + LVP+ V+ L
Sbjct: 417 TIKVACGIWHSAAIVEVTNQTGANVMSKKL-YTWGDGDKNRLGHGDKEPRLVPKCVQALL 475
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+Y + + CG T ++++G V++ +G N L N D P L+
Sbjct: 476 EYNFH-QLACGHNMTVALATSGRVFT------MGSSSNGQLG-NPKSDGKQPCLV----- 522
Query: 309 HGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CGA+H ++T ++++WG G +G LG G D P +V
Sbjct: 523 -----QDRLASELVEEISCGASHVTVLTSRS-EVYTWGMGANGRLGHGDLKDRKKPCLV 575
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG + D T S V P P+ V ++ACG+ HV
Sbjct: 212 IESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALT 271
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E+ S V ++CG FHT
Sbjct: 272 TRQGEVF--------TWGEEFGGRLGHGTDADISRPKLVESL---SLTVVDLISCGEFHT 320
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T D+ W G G LG GT S +P++V + + ++SV CG +H
Sbjct: 321 CAVT---TSGDLFN---WGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWH 374
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ +S+G ++++ G LG +L + +A+S ++VA
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-------------KTIKVA 421
Query: 321 CGAAHT---VLVTDD------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ V VT+ KL++WG G LG G P V
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCV 471
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 44/268 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
+++ SV G S ++G L+ +G +G F ++ + P V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFG---------DGTFGVLGHGDRETLAYPKEVEALS 413
Query: 126 GHTVVKVACGSEHVVALV----SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
G +KVACG H A+V G + L Y+WG + +LG GD+E RL PK +
Sbjct: 414 GFKTIKVACGIWHSAAIVEVTNQTGANVMSKKL--YTWGDGDKNRLGHGDKEPRLVPKCV 471
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+ + + +++ CG T L R +T G NGQLG+ + P
Sbjct: 472 QALLE---YNFHQLACGHNMTVALATSGR--------VFTMGSSSNGQLGNPKSDGKQ-P 519
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
V++ + + CG H +V++S +V++WGM N L + D P
Sbjct: 520 CLVQDRLASELVEEISCGASHVTVLTSRSEVYTWGMG------ANGRLGHGDLKDRKKPC 573
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLV 329
L+ K + ++CG+ T +
Sbjct: 574 LV-----EALKDRHVKSISCGSNFTTCI 596
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG H ++ + G+V++WG E G LG +A ++R + +++S ++
Sbjct: 261 IACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVD--------- 311
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
++CG HT VT G L++WG G G+LG G + ++ P V P
Sbjct: 312 ----LISCGEFHTCAVTTSG-DLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGP 359
>gi|4079811|gb|AAD08658.1| Herc2 [Mus musculus]
Length = 4836
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 130/290 (44%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIQALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A GS H L S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IAYGSSHSAPLTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4097
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4098 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4146
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4147 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4197
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4245
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4246 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 534
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 586
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 587 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 639
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 640 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 691
Query: 349 TG 350
G
Sbjct: 692 HG 693
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 112/255 (43%), Gaps = 32/255 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S + ++G L+ WG L + G + P V GH V++V
Sbjct: 3101 RIRDIAYGSSHSAPLTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 3157
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E + +SWG + G+LG G E P+ IE N V
Sbjct: 3158 ACGSRDAQTLALTDEG------LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GV 3208
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ + LT + WT+G G+ +LGHG+ P+ V+ L +
Sbjct: 3209 CQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKK 3259
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V G H V+ +G V++WG + G N + T N P L+ G +
Sbjct: 3260 IVHVAVGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLE 3308
Query: 313 FQDPVQVACGAAHTV 327
Q +VACG++H+V
Sbjct: 3309 GQKITRVACGSSHSV 3323
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++I+ +
Sbjct: 3055 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIQALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ GS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIAYGSSHSAPLTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4146
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4147 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4197
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4198 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4248
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4249 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4300
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4301 --QGKKVN---RVACGSAHTL 4316
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4004 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4054
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4105
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4106 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4154
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4155 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4182
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4244
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4245 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4296
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4297 VAALQGKK---VNRVACGSAHT 4315
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H +LT E W G N Q H T PE P ++V +
Sbjct: 719 STHCLVLTEDS------EVHSW----GSNDQCQHFDTLGVTKPEPTA-FPGLDSKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3957 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3994
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4053
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4100
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4101 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>gi|224496032|ref|NP_001139103.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 992
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 122/260 (46%), Gaps = 32/260 (12%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-P 178
P+ V+++ACG +H +AL + G+ + WG N +GQLGL ++ + P
Sbjct: 108 PLKSLENRQVIQIACGDQHSMALSNDGQ--------LFVWGENTHGQLGLRKEQAGTQSP 159
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ +++ + V +++ G H+ +L+ L + + +G GQLG G T+
Sbjct: 160 QHLQSLCE---IPVAQISAGGNHSFVLS--------LSGVVFGWGSNSAGQLGLGDTKDR 208
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
VP VK L VS+ CG HT+ +S G V+++G G G L N D
Sbjct: 209 FVPTIVKSLCGK-KTVSISCGGEHTATLSKGGTVFTFG-SGGFG-----QLGHNSLKDEH 261
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P LI+ G K QV CG HT++ + ++S+G G G LG G+ + P
Sbjct: 262 HPRLIAE--LWGSKVS---QVTCGRHHTLVFEESSKLIYSFGCGMQGQLGNGEQVKQSVP 316
Query: 359 AIVLWPPLTEEFKQDELNTG 378
VL P EF ++L TG
Sbjct: 317 LPVLLPTECTEFTMEKLITG 336
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 39/195 (20%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHT 128
I + + AGG S + +G ++ WG S++ G L + F P+ V G
Sbjct: 168 IPVAQISAGGNHSFVLSLSGVVFGWG------SNSAGQLGLGDTKDRFVPTIVKSLCGKK 221
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG EH L G +++G+ GQLG + P++I
Sbjct: 222 TVSISCGGEHTATLSKGG--------TVFTFGSGGFGQLGHNSLKDEHHPRLIAEL---- 269
Query: 189 PWA--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
W V +VTCG HT + + + ++FG G GQLG+G EQVK+
Sbjct: 270 -WGSKVSQVTCGRHHTLVFEESSK-------LIYSFGCGMQGQLGNG--------EQVKQ 313
Query: 247 LPQYVYLVSVDCGLF 261
L+ +C F
Sbjct: 314 SVPLPVLLPTECTEF 328
>gi|125821491|ref|XP_698091.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4846
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 122/452 (26%), Positives = 185/452 (40%), Gaps = 81/452 (17%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H+A K+ S K +LA + G ++ WG+ D G G S + G
Sbjct: 449 HRAIKKVSSSKGSDGHTLAFTSEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 505
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 506 KVVVCVSAGYRHSAAVSEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 557
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 558 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 605
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 606 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 657
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 658 A-----TTRVVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 701
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG--------AEERDEKLSS-------AMEEMKLLQS 411
T+ K GLD + G A RD ++ + +EE
Sbjct: 702 TKPKK-----VIGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHL 756
Query: 412 KLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRSK 465
+ S +ERY ++ I PF P S + F + + N L A S
Sbjct: 757 R-SFLERYCDGINNEIPPLPF------PSSKEHHNFLKLCLRLLSNHLALALAGGVATSI 809
Query: 466 LVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R R RN+L + D + IQE V E L
Sbjct: 810 LGRQARPLRNLLFRLMDASVPDEIQEAVIETL 841
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 123/250 (49%), Gaps = 40/250 (16%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4067 TQMVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4118
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + ++FG G+ G+LG G T + +PE+V
Sbjct: 4119 EE---VVQMSCGFKHSAVVTS--------DGKLFSFGNGDYGRLGLGNTSNKKLPERVSA 4167
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEK--GLGLCPNASLTRNEAGDAISPILI 303
L + + V CGL HT VS+ G VW++G LGL + + + + D + I I
Sbjct: 4168 LEGH-QVGQVACGLNHTLAVSADGMTVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCGIGI 4226
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
+VACG +V +T DG ++++G+ R L G+ + P V
Sbjct: 4227 K-------------KVACGTQFSVALTKDG-NVYTFGQDRLIGLPEGRARNHNRPQQV-- 4270
Query: 364 PPLTEEFKQD 373
P LT F +D
Sbjct: 4271 PALTGVFIED 4280
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4079 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +S+G + G+LGLG+ ++ P+ + V +V CG HT
Sbjct: 4136 SDGK--------LFSFGNGDYGRLGLGNTSNKKLPERVSALEGHQ---VGQVACGLNHTL 4184
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ + M W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4185 AVS----ADGM---TVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4236
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G+V+++G ++ +GL P RN P L G +D VA GA
Sbjct: 4237 VALTKDGNVYTFGQDRLIGL-PEGR-ARNHNRPQQVPALT------GVFIED---VAVGA 4285
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ G +++WG G LG G T P ++
Sbjct: 4286 EHTLTLSSTG-DVYAWGSNSEGQLGLGHTNHVREPTLI 4322
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-FHTALLTHRKRPNDMLESM 218
G + G+LGLGD ++ K + TF + GS HT T E
Sbjct: 423 GKGSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFTS--------EGE 473
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ VS G++++WG
Sbjct: 474 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 533
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
L S +RN P L+ G +V+CG++HT+ ++ DG +WS
Sbjct: 534 DFGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWS 580
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G +G LG G T + P +V
Sbjct: 581 FGGGDNGKLGHGDTNRVYKPKVV 603
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/213 (27%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ + G S + + G L+ +GN D G + + P V GH V +V
Sbjct: 4120 EVVQMSCGFKHSAVVTSDGKLFSFGNG---DYGRLGLGNTSNKKLPERVSALEGHQVGQV 4176
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H +A+ + G T +++G + G+LGLG+ ++ P+ ++ +
Sbjct: 4177 ACGLNHTLAVSADGMTV-------WAFGDGDYGKLGLGNSTAKSSPQKVDVL---CGIGI 4226
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CG+ + LT + +TFG L G ++ P+QV L V+
Sbjct: 4227 KKVACGTQFSVALTK--------DGNVYTFGQDRLIGLPEGRARNHNRPQQVPAL-TGVF 4277
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGL 283
+ V G HT +SS GDV++WG E LGL
Sbjct: 4278 IEDVAVGAEHTLTLSSTGDVYAWGSNSEGQLGL 4310
Score = 46.6 bits (109), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4224 IGIKKVACGTQFSVALTKDGNVYTFGQDRLIGLPEGRAR------NHNRPQQVPALTGVF 4277
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH + L S G+ Y +WG+N+ GQLGLG P +I +
Sbjct: 4278 IEDVAVGAEHTLTLSSTGDVY--------AWGSNSEGQLGLGHTNHVREPTLISALQGKN 4329
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4330 ---IQQISAGRCHSAAWT 4344
>gi|344293366|ref|XP_003418394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Loxodonta
africana]
Length = 4858
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIRKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSSVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4091 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4147
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4148 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4196
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4197 AVSSDG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4248
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4249 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4297
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4298 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4334
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIRKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4236 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4289
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4290 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4341
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4342 ---VRQISAGRCHSAAWT 4356
>gi|334314433|ref|XP_003340037.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Monodelphis
domestica]
Length = 4790
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 184/452 (40%), Gaps = 81/452 (17%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG--------AEERDEKLSS-------AMEEMKLLQS 411
T+ K GLD + G A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHL 761
Query: 412 KLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRSK 465
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 762 R-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATSI 814
Query: 466 LVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 815 LGRQAGPLRNLLFRLMDSSVPDEIQEVVIETL 846
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G V++++CG +H +
Sbjct: 4023 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT 4079
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4080 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4128
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4129 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4180
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D +A GA
Sbjct: 4181 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---IAVGA 4229
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P ++
Sbjct: 4230 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLI 4266
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4168 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4221
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +A G+EH +AL S G+ Y +WG+N+ GQLGLG P +I +
Sbjct: 4222 IEDIAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLITILQGKN 4273
Query: 189 PWAVYEVTCGSFHTALLTHRKRP 211
+ +++ G H+A T P
Sbjct: 4274 ---IRQISAGRCHSAAWTASPVP 4293
>gi|338717875|ref|XP_001918080.2| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Equus caballus]
Length = 4860
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 119/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P L+
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLVEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4093 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4150 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4198
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4199 AVSTDG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4250
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4251 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4299
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4300 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4336
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4238 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4291
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4292 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4343
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4344 ---IRQISAGRCHSAAWT 4358
>gi|109484871|ref|XP_001075834.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4092 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4149 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4197
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4198 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4249
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4250 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4298
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4299 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4290
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4291 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4342
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4343 ---IRQISAGRCHSAAWT 4357
>gi|392350138|ref|XP_236362.6| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Rattus
norvegicus]
Length = 4859
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4092 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4149 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4197
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4198 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4249
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4250 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4298
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4299 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4290
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4291 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4342
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4343 ---IRQISAGRCHSAAWT 4357
>gi|354474338|ref|XP_003499388.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Cricetulus griseus]
Length = 4859
Score = 92.4 bits (228), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLSLSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4092 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4148
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4149 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4197
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4198 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4249
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4250 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4298
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4299 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4335
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4237 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4290
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4291 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4342
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4343 ---IRQISAGRCHSAAWT 4357
>gi|440798633|gb|ELR19700.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein, partial [Acanthamoeba castellanii
str. Neff]
Length = 872
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 117/273 (42%), Gaps = 45/273 (16%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G F+ + +P V VV+VA G +A+ S GE YSWG N QL
Sbjct: 168 GSFTPYTQPSPEVVTGLQHVKVVEVAAGYSFSLAVTSQGE--------VYSWGFNEKCQL 219
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
GLG R ++ P+++ + TCG H+ LL+ +TFGLG
Sbjct: 220 GLGHRYNQSVPQLVPHLQGVH---IVSATCGQQHSVLLS--------AAGHVYTFGLGVF 268
Query: 228 GQLGHGTTQSALVPEQVKEL--------PQYVYLVSVDCGLFHTSVVSSAGDVWSWG-ME 278
GQLGHG + P +V+ L +V + CG HT + +G VW+WG E
Sbjct: 269 GQLGHGVSSDERFPRRVEALVPAEEGVESAGERIVQIACGSHHTLALGVSGTVWTWGSAE 328
Query: 279 KGLGLCPN-----ASLTRNEAGDAI---SPILISG--NGPHGPKFQDPVQVACGAAHTVL 328
G N A+ R E A+ +P +SG +G H V+CG H +
Sbjct: 329 YGQQGGTNAYEDWATGQRAEKSAAMICATPRSLSGCFDGKH------IAHVSCGHLHNLA 382
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG ++SWG G GVLG G P ++
Sbjct: 383 TARDG-SVYSWGWGSYGVLGHGNHRFQLVPKLI 414
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 85/229 (37%), Gaps = 46/229 (20%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+K+ V AG SLA+ + G ++ WG C L G + P V G
Sbjct: 187 VKVVEVAAGYSFSLAVTSQGEVYSWGFNEKCQL------GLGHRYNQSVPQLVPHLQGVH 240
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF---- 184
+V CG +H V L +AG Y++G GQLG G P+ +E
Sbjct: 241 IVSATCGQQHSVLLSAAGH--------VYTFGLGVFGQLGHGVSSDERFPRRVEALVPAE 292
Query: 185 --NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH-------GTT 235
+ + + ++ CGS HT L + WT+G E GQ G T
Sbjct: 293 EGVESAGERIVQIACGSHHTLALG--------VSGTVWTWGSAEYGQQGGTNAYEDWATG 344
Query: 236 QSA--------LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
Q A P + ++ V CG H + G V+SWG
Sbjct: 345 QRAEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHNLATARDGSVYSWG 393
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 110/290 (37%), Gaps = 82/290 (28%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES--RLRPKII 181
F G + VACG +H +A+ GE Y WG GQLG G+R++ L+P +
Sbjct: 26 FRGKRIRSVACGEQHSMAV--------GETGDVYVWGRAKEGQLGNGERKAANALKPVRV 77
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLT-----------HRK--------------------- 209
E + V CG H +T H+
Sbjct: 78 EGLRHER---VVAGVCGYNHCLAVTVGGKLYQWGMLHKHVEGSANKEYFGMAIGLSGLNS 134
Query: 210 -RPNDML-ESMCWTFGLGENGQ----------LGHGTTQSALVPEQVKELPQYVYLVSVD 257
R M+ S + G G+ G T + PE V L Q+V +V V
Sbjct: 135 DRMKRMVGRSHSTYYAAGATGEELEELSRVQNFGSFTPYTQPSPEVVTGL-QHVKVVEVA 193
Query: 258 CGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
G + V+S G+V+SWG + GLG N S+ P L+ P
Sbjct: 194 AGYSFSLAVTSQGEVYSWGFNEKCQLGLGHRYNQSV----------PQLV-------PHL 236
Query: 314 Q--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q V CG H+VL++ G+ ++++G G G LG G + D P V
Sbjct: 237 QGVHIVSATCGQQHSVLLSAAGH-VYTFGLGVFGQLGHGVSSDERFPRRV 285
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 62/140 (44%), Gaps = 11/140 (7%)
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
G G+ G+LG G + + E + + SV CG H+ V GDV+ WG K G
Sbjct: 1 GTGKVGELGAGRDNKEALEPILLERFRGKRIRSVACGEQHSMAVGETGDVYVWGRAKE-G 59
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
N +A +A+ P+ + G + + V CG H + VT G KL+ WG
Sbjct: 60 QLGNG---ERKAANALKPVRVEGL-----RHERVVAGVCGYNHCLAVTVGG-KLYQWGML 110
Query: 343 RSGVLGTGKTIDFFAPAIVL 362
V G+ ++F AI L
Sbjct: 111 HKHVEGSANK-EYFGMAIGL 129
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 80/199 (40%), Gaps = 35/199 (17%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALW-----MWGNCPLPDSSTEGGFSLVSSFTPSPVW 122
H + I S G S+ + AG ++ ++G SS E V + P+
Sbjct: 235 HLQGVHIVSATCGQQHSVLLSAAGHVYTFGLGVFGQLGHGVSSDERFPRRVEALVPAEEG 294
Query: 123 -DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG---------LGDR 172
+ G +V++ACGS H +AL +G ++WG+ GQ G G R
Sbjct: 295 VESAGERIVQIACGSHHTLALGVSG--------TVWTWGSAEYGQQGGTNAYEDWATGQR 346
Query: 173 ESRLRPKIIETFNQDSP----WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
+ I T S + V+CG H L T R + +++G G G
Sbjct: 347 AEKSAAMICATPRSLSGCFDGKHIAHVSCGHLHN-LATAR-------DGSVYSWGWGSYG 398
Query: 229 QLGHGTTQSALVPEQVKEL 247
LGHG + LVP+ ++ +
Sbjct: 399 VLGHGNHRFQLVPKLIRRI 417
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 24/143 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDS-------------STEGGFSLVSSFTPS 119
+I + G +LA+ +G +W WG+ E +++ + S
Sbjct: 301 RIVQIACGSHHTLALGVSGTVWTWGSAEYGQQGGTNAYEDWATGQRAEKSAAMICATPRS 360
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
F G + V+CG H +A G YSWG + G LG G+ +L PK
Sbjct: 361 LSGCFDGKHIAHVSCGHLHNLATARDGS--------VYSWGWGSYGVLGHGNHRFQLVPK 412
Query: 180 IIETFNQDSPWAVYEVTCGSFHT 202
+I + + + G+ H+
Sbjct: 413 LIRRIGGER---IVQTAAGAKHS 432
>gi|313236427|emb|CBY11744.1| unnamed protein product [Oikopleura dioica]
Length = 516
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 127/296 (42%), Gaps = 43/296 (14%)
Query: 70 API-KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP+ KI + K S+AI G +W WG+ D G + +P +
Sbjct: 211 APVRKILTSKGSDGHSIAIGKNGQIWTWGD---GDYGKLGHGDSTTQKSPKLIEALASRV 267
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+V CG H A+ AG Y WG + G+LGLGD R P + + S
Sbjct: 268 IVDADCGHRHSAAVCDAGHLYM--------WGEGDYGRLGLGDALQRSVPVQVPDIREAS 319
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V CG HT +L+ R W+FG ENG+LGHG T P+ + L
Sbjct: 320 -----QVVCGFNHTVVLSTDGR-------TVWSFGAAENGKLGHGDTNRQFRPKIIDAL- 366
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA--ISPILISGN 306
Q + + + G ++ V+ G ++ WG LG N + D + P ++
Sbjct: 367 QGLTITQIAAGTQISAAVTREGALYVWGFGPCLG---------NGSSDETFMLPKVV--- 414
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI-DFFAPAIV 361
G + + +A G H V +T DG +++WG ++G GTG + + +P +V
Sbjct: 415 --RGLSGRVVIDIAVGENHVVALTKDGL-VFTWGNNQNGQCGTGSGMATYTSPQMV 467
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 59/240 (24%), Positives = 81/240 (33%), Gaps = 68/240 (28%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I G S A+ +AG L+MWG D G + P V D +V
Sbjct: 268 IVDADCGHRHSAAVCDAGHLYMWGE---GDYGRLGLGDALQRSVPVQVPDIR--EASQVV 322
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII------------ 181
CG H V L + G T +S+GA NG+LG GD + RPKII
Sbjct: 323 CGFNHTVVLSTDGRT-------VWSFGAAENGKLGHGDTNRQFRPKIIDALQGLTITQIA 375
Query: 182 ------------------------------ETF------NQDSPWAVYEVTCGSFHTALL 205
ETF S V ++ G H L
Sbjct: 376 AGTQISAAVTREGALYVWGFGPCLGNGSSDETFMLPKVVRGLSGRVVIDIAVGENHVVAL 435
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
T + + +T+G +NGQ G G+ + Q+ + + V G HT V
Sbjct: 436 TK--------DGLVFTWGNNQNGQCGTGSGMATYTSPQMVQGLHGAGIQQVTAGTTHTFV 487
>gi|405970894|gb|EKC35758.1| X-linked retinitis pigmentosa GTPase regulator-like protein
[Crassostrea gigas]
Length = 1288
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 130/304 (42%), Gaps = 38/304 (12%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS-PVWDFH--GHTVVKVACGSE 137
G + + G L+ WG G +L ++ +P V H V+ V+CG E
Sbjct: 707 GPQHVGVVRNGELYTWGKTS-QGRLGHGDLALENTVSPPCRVETLHMLQIKVLSVSCGGE 765
Query: 138 HVVAL---------------VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
H VAL V G T+ + YSWG +GQLG G+ E L P +
Sbjct: 766 HTVALTQQGVYGWGSSKYGQVGTGTTHIYSRPIVYSWGWGVHGQLGHGNIEDALTPTKVT 825
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
+ V + G H+ +LT + + ++FG G GQLG G + + VP
Sbjct: 826 FL---TSLNVSHIQAGHCHSLVLTE--------QGVVYSFGCGFFGQLGIGNNRKSSVPV 874
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-GLGLCPNASLTRNEA----GDA 297
+V LP+ + +V+ FH V+ + V++WG L +A+ +A GD
Sbjct: 875 KVHTLPEKIAIVATR--YFHNVAVTHSNKVYTWGCHPYNLRFVAHAARKARQAGKFMGDP 932
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+ L+ G +VA G++H +L+T DG ++SWGR G +G +
Sbjct: 933 VERYLLPEVVDTGYVHGRITKVAVGSSHGLLMTLDG-DVYSWGRNAEGQIGNNSKYEMKQ 991
Query: 358 PAIV 361
P I+
Sbjct: 992 PNII 995
Score = 45.4 bits (106), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 68/178 (38%), Gaps = 34/178 (19%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPL---------PDSSTEGGF--SLVSSF 116
H P KI V ++A+ ++ ++ WG P + G F V +
Sbjct: 877 HTLPEKIAIVATRYFHNVAVTHSNKVYTWGCHPYNLRFVAHAARKARQAGKFMGDPVERY 936
Query: 117 TPSPVWD---FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
V D HG + KVA GS H + + G+ YSWG N GQ+G +
Sbjct: 937 LLPEVVDTGYVHGR-ITKVAVGSSHGLLMTLDGD--------VYSWGRNAEGQIGNNSKY 987
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+P II N + + G F+ + T E + W +G + GQLG
Sbjct: 988 EMKQPNIITQINDRQ--MAHLASGGEFNVTMDT---------EGLVWVWGKNDFGQLG 1034
>gi|395746465|ref|XP_002825266.2| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase
HERC2-like [Pongo abelii]
Length = 4581
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3786 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 3842
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 3843 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 3891
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 3892 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 3942
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 3943 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 3990
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 3991 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4042
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 3838 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 3891
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 3892 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 3942
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 3943 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 3993
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 3994 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4045
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4046 --QGKKVN---RVACGSAHTL 4061
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 125/294 (42%), Gaps = 43/294 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +G + G ++ WG D G FS + P + +
Sbjct: 2800 VKKVAVHSGTSQTGFXPVDGKVFSWGEG---DDGKLGHFSRM----PRLIEALKTKRIRD 2852
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 2853 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 2901
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVKELPQY 250
V +V CGS L E + ++ G G+ ++G G + +P+ ++ L
Sbjct: 2902 VIQVACGSRDAQTLALTD------EGLVFSLGDGDLWKIGPGPEVKGCNIPQNIERL-NG 2954
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 2955 QGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRG 3006
Query: 311 PKFQDPVQVAC---GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K VAC GA H + VTD G ++++WG G G G T P +V
Sbjct: 3007 KKI-----VACSCSGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3054
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 111/257 (43%), Gaps = 34/257 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 2849 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 2905
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWA 191
ACGS L E + +S G + ++G G P+ IE N
Sbjct: 2906 ACGSRDAQTLALTDEG------LVFSLGDGDLWKIGPGPEVKGCNIPQNIERLNGQ---G 2956
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ CG+ + LT + WT+G G+ +LGHG+ P+ V+ L +
Sbjct: 2957 VCQIECGAQFSLALTK--------SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGK 3007
Query: 252 YLVSVDC-GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V+ C G H V+ +G V++WG + G N + T N P L+ G
Sbjct: 3008 KIVACSCSGALHCLAVTDSGQVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QG 3056
Query: 311 PKFQDPVQVACGAAHTV 327
+ Q +VACG++H+V
Sbjct: 3057 LEGQKITRVACGSSHSV 3073
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 89/352 (25%), Positives = 133/352 (37%), Gaps = 85/352 (24%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
E+D K N + + A G+ S A ++ WG L D GG PS
Sbjct: 2684 EEDEKGNSGS---LAKRMAAGLESAATIRT-KVFSWG---LNDKDQLGGLKNKKIKVPSF 2736
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYK-GE--------------------------- 152
VV+VA GS+ + A+ G+ Y GE
Sbjct: 2737 SETLSALNVVQVAGGSKSLFAVTVEGKVYACGEATKWPAWGLGISSGTVPIPHGXITALS 2796
Query: 153 ---------------------DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
D +SWG ++G+LG R P++IE
Sbjct: 2797 SYVVKKVAVHSGTSQTGFXPVDGKVFSWGEGDDGKLGHFSR----MPRLIEALKTKR--- 2849
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 2850 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 2900
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++ V CG T ++ G V+S G + P + G I + NG
Sbjct: 2901 RVIQVACGSRDAQTLALTDEGLVFSLGDGDLWKIGPGPEVK----GCNIPQNIERLNG-- 2954
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 2955 ----QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3001
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3692 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 3748
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3749 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3799
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3800 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 3850
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 3851 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 3899
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 3900 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 3927
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 3933 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 3989
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 3990 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4041
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4042 VAALQGKK---VNRVACGSAHT 4060
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G K + VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3702 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3739
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3740 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 3798
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 3799 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 3845
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 3846 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 3884
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|326674002|ref|XP_001334658.4| PREDICTED: RCC1 and BTB domain-containing protein 2 [Danio rerio]
Length = 527
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 112/249 (44%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G ++ ++ G+ HVV + GE Y +WG N QLG G
Sbjct: 61 STIEPRRIDILCGKKIISLSYGTGPHVVIATADGEVY--------AWGHNGYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P ++ T V EV+CGS HT LT + + +G +GQ+G
Sbjct: 113 NHGLTPALVST--NLIGKRVTEVSCGSHHTIALT--------TDGEVYAWGYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + P +V Q +V++ CG + V G+ + WG N L
Sbjct: 163 GSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGETYGWGYN------CNGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ +P I+ + + +QVACG AHT+ +TD+G+ ++SWG G LGTG
Sbjct: 217 NNGNQQTPCRIA-----ALQGINIIQVACGYAHTLALTDEGF-VYSWGANSYGQLGTGNK 270
Query: 353 IDFFAPAIV 361
+ P ++
Sbjct: 271 SNQAVPTLI 279
>gi|403381060|ref|ZP_10923117.1| regulator of chromosome condensation rcc1, partial [Paenibacillus
sp. JC66]
Length = 851
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 132/285 (46%), Gaps = 45/285 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I ++ AG SLA+ +G ++ +GN +S G + TP + V +A
Sbjct: 130 IQAIAAGDFHSLALTKSGDVYSFGNG----TSGLGHGNTEDQSTPKKIESLS--DVQAIA 183
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G+ YS+G G+LG GD +S+L PK IE + +
Sbjct: 184 AGGNHSLALTKSGD--------VYSFGFGLFGRLGHGDTDSQLEPKKIEDLSD-----IQ 230
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G H+ LT ++FG G +GQLGHG T++ L P+++++L +
Sbjct: 231 AIAAGGNHSLALTKSGD--------VYSFGWGLHGQLGHGDTENQLTPKKIEDLSD---I 279
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+V G H+ ++ +G+V+S+G L + D ++P I G
Sbjct: 280 QAVAAGANHSLALTKSGEVYSFGRGN------TGQLGHGDTDDQLTPKKIEG-------L 326
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+D +A G H++ +T G ++S+G G SG LG G T + P
Sbjct: 327 KDIQAIAAGDFHSLALTKSG-DVYSFGNGTSG-LGHGDTANQLEP 369
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 117/273 (42%), Gaps = 75/273 (27%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +A G+ H +AL +G+ YS+G G+LG G+ +S+L PK IE +
Sbjct: 80 IQAIAAGTNHSLALTKSGD--------VYSFGFGLFGRLGHGNTDSQLEPKKIEGLSD-- 129
Query: 189 PWAVYEVTCGSFHTALLTHR--------------------KRPNDMLESM---------- 218
+ + G FH+ LT + +ES+
Sbjct: 130 ---IQAIAAGDFHSLALTKSGDVYSFGNGTSGLGHGNTEDQSTPKKIESLSDVQAIAAGG 186
Query: 219 -----------CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
++FG G G+LGHG T S L P+++++L + ++ G H+ ++
Sbjct: 187 NHSLALTKSGDVYSFGFGLFGRLGHGDTDSQLEPKKIEDLSD---IQAIAAGGNHSLALT 243
Query: 268 SAGDVWS--WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
+GDV+S WG+ LG + + ++P I D VA GA H
Sbjct: 244 KSGDVYSFGWGLHGQLG--------HGDTENQLTPKKIE-------DLSDIQAVAAGANH 288
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
++ +T G +++S+GRG +G LG G T D P
Sbjct: 289 SLALTKSG-EVYSFGRGNTGQLGHGDTDDQLTP 320
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/336 (25%), Positives = 141/336 (41%), Gaps = 82/336 (24%)
Query: 67 NHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
N AP KI ++ AG SLA+ +G ++ +G G + S P
Sbjct: 67 NQLAPKKIEGLSDIQAIAAGTNHSLALTKSGDVYSFGFGLF---GRLGHGNTDSQLEPKK 123
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
+ + +A G H +AL +G+ YS+G +G LG G+ E + PK
Sbjct: 124 IEGLS--DIQAIAAGDFHSLALTKSGD--------VYSFGNGTSG-LGHGNTEDQSTPKK 172
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
IE+ + V + G H+ LT ++FG G G+LGHG T S L
Sbjct: 173 IESLSD-----VQAIAAGGNHSLALTKSGD--------VYSFGFGLFGRLGHGDTDSQLE 219
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS--WGMEKGLGLCPNASLTRNEAGDAI 298
P+++++L + ++ G H+ ++ +GDV+S WG+ LG + + +
Sbjct: 220 PKKIEDLSD---IQAIAAGGNHSLALTKSGDVYSFGWGLHGQLG--------HGDTENQL 268
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+P I D VA GA H++ +T G +++S+GRG +G LG G T
Sbjct: 269 TPKKIE-------DLSDIQAVAAGANHSLALTKSG-EVYSFGRGNTGQLGHGDT------ 314
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEE 394
DD++ K +EG ++
Sbjct: 315 ----------------------DDQLTPKKIEGLKD 328
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 98/216 (45%), Gaps = 34/216 (15%)
Query: 145 AGETYKGEDLV-CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
A E+ +LV +S+G G+LG GD ++L PK IE + + + G+ H+
Sbjct: 37 AQESETNANLVSVFSFGMGMYGKLGHGDTANQLAPKKIEGLSD-----IQAIAAGTNHSL 91
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
LT ++FG G G+LGHG T S L P++++ L + ++ G FH+
Sbjct: 92 ALTKSGD--------VYSFGFGLFGRLGHGNTDSQLEPKKIEGLSD---IQAIAAGDFHS 140
Query: 264 SVVSSAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
++ +GDV+S+G GLG D +P I D +A G
Sbjct: 141 LALTKSGDVYSFGNGTSGLG--------HGNTEDQSTPKKIE-------SLSDVQAIAAG 185
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
H++ +T G ++S+G G G LG G T P
Sbjct: 186 GNHSLALTKSG-DVYSFGFGLFGRLGHGDTDSQLEP 220
>gi|348542108|ref|XP_003458528.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Oreochromis
niloticus]
Length = 4936
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H+A K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 461 HRAIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 517
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 518 KVVVCVSAGYRHSAAVSEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 569
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 570 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 617
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 618 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 669
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V ++ G +H + ++ D ++++WG G G G +
Sbjct: 670 A-----TTRVVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 709
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4169 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4225
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ +++G + G+LGLG+ ++ P+ + + V +V CG HT
Sbjct: 4226 ADGK--------LFTFGNGDYGRLGLGNTSNKKLPEKVTALEG---YHVGQVACGLNHTL 4274
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+++ + M M W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4275 VVS----ADGM---MVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4326
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL + N G G QD VA GA
Sbjct: 4327 VALTKDGKVFTFGQDRLIGLPEGRARNHNRPQQV--------PGLSGIHIQD---VAVGA 4375
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT++++ G +++WG G LG G T P +V
Sbjct: 4376 EHTLVLSSTG-DVYTWGSNSEGQLGLGHTNHVREPTLV 4412
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 23/203 (11%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-FHTALLTHRKRPNDMLESM 218
G + G+LGLGD ++ K + TF + GS HT T E
Sbjct: 435 GKGSYGRLGLGDSNNQSTLKKL-TFEPHRAIKKVSSSKGSDGHTLAFT--------TEGE 485
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ VS G++++WG
Sbjct: 486 VFSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEG 545
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
L S +RN P L+ G +V+CG++HT+ ++ DG +WS
Sbjct: 546 DFGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWS 592
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G +G LG G T + P +V
Sbjct: 593 FGGGDNGKLGHGDTNRVYKPKVV 615
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 96/213 (45%), Gaps = 24/213 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ + G S + G L+ +GN D G + + P V G+ V +V
Sbjct: 4210 EVVQMSCGFKHSAVVTADGKLFTFGNG---DYGRLGLGNTSNKKLPEKVTALEGYHVGQV 4266
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H + + + G ++ +++G + G+LGLG+ ++ P+ ++ +
Sbjct: 4267 ACGLNHTLVVSADG-------MMVWAFGDGDYGKLGLGNSTAKSSPQKVDVL---CGIGI 4316
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CG+ + LT + +TFG L G ++ P+QV L ++
Sbjct: 4317 KKVACGTQFSVALTK--------DGKVFTFGQDRLIGLPEGRARNHNRPQQVPGL-SGIH 4367
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGL 283
+ V G HT V+SS GDV++WG E LGL
Sbjct: 4368 IQDVAVGAEHTLVLSSTGDVYTWGSNSEGQLGL 4400
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 20/143 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4314 IGIKKVACGTQFSVALTKDGKVFTFGQDRLIGLPEGRAR------NHNRPQQVPGLSGIH 4367
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH + L S G+ Y +WG+N+ GQLGLG P ++ T +
Sbjct: 4368 IQDVAVGAEHTLVLSSTGDVY--------TWGSNSEGQLGLGHTNHVREPTLVTTLQGKN 4419
Query: 189 PWAVYEVTCGSFHTALLTHRKRP 211
+++++ G H+A T P
Sbjct: 4420 ---IHQISAGRCHSAAWTAPSVP 4439
>gi|348525468|ref|XP_003450244.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Oreochromis niloticus]
Length = 536
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 111/241 (46%), Gaps = 31/241 (12%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
L S+ P + G +V ++ G+ HVV + GE Y +WG N QLG G
Sbjct: 68 LQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVY--------AWGHNGYSQLGNG 119
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
L P ++ T N S V EV CGS HT LT + + +G +GQ+
Sbjct: 120 TTNHGLTPALVST-NLLSK-RVTEVACGSHHTIALT--------TDGEVYAWGYNNSGQV 169
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G G+T + P +V Q +V++ CG + V G+++ WG N L
Sbjct: 170 GSGSTANQPTPRRVSSCLQNKVVVNIACGQLCSMAVLDNGEIYGWGYN------CNGQLG 223
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
G+ +P I+ + + VQVACG AHT+ +TD+G+ +++WG G LGTG
Sbjct: 224 LGNNGNQQTPCRIAA-----LQGVNIVQVACGYAHTLALTDEGF-VYAWGANSYGQLGTG 277
Query: 351 K 351
Sbjct: 278 N 278
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ ++ G + S+A+ + G ++ WG NC G + TP + G +V+V
Sbjct: 192 VVNIACGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNG----NQQTPCRIAALQGVNIVQV 247
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H +AL G Y+WGAN+ GQLG G++ ++ P I N D V
Sbjct: 248 ACGYAHTLALTDEG--------FVYAWGANSYGQLGTGNKSNQALPTPI---NTDKERIV 296
Query: 193 YEVTCGSFHTA 203
C + HT+
Sbjct: 297 EVAACHTSHTS 307
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 15/143 (10%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF-HTSVVSSAGDVWSWGME 278
F LG N G LG G QS + P ++ L +VS+ G H + ++ G+V++WG
Sbjct: 53 FALGTNCSGCLGLGDLQSTIEPRRIDVLCGK-KIVSLSYGTGPHVVIATADGEVYAWGHN 111
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L ++P L+S N + +VACG+ HT+ +T DG ++++
Sbjct: 112 G------YSQLGNGTTNHGLTPALVSTN----LLSKRVTEVACGSHHTIALTTDG-EVYA 160
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG SG +G+G T + P V
Sbjct: 161 WGYNNSGQVGSGSTANQPTPRRV 183
>gi|115439409|ref|NP_001043984.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|56784719|dbj|BAD81868.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|56785284|dbj|BAD82210.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533515|dbj|BAF05898.1| Os01g0700200 [Oryza sativa Japonica Group]
gi|215704825|dbj|BAG94853.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1044
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 50/299 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVK 131
+ G + A+ +G L+ WG N L TE VS + P V G V+
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTE-----VSYWLPKKVSGPLEGLQVLS 367
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H S+G+ Y++G G LG GDRE+ PK +E S +
Sbjct: 368 VACGSWHSALTTSSGK--------LYTFGDGTFGVLGHGDRETLAYPKEVEAL---SGFK 416
Query: 192 VYEVTCGSFHTALL---THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V CG +H+A + T++ N M + + +T+G G+ +LGHG + LVP+ V+ L
Sbjct: 417 TIKVACGIWHSAAIVEVTNQTGANVMSKKL-YTWGDGDKNRLGHGDKEPRLVPKCVQALL 475
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+Y + + CG T ++++G V++ +G N L N D P L+
Sbjct: 476 EYNFH-QLACGHNMTVALATSGRVFT------MGSSSNGQLG-NPKSDGKQPCLV----- 522
Query: 309 HGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CGA+H ++T ++++WG G +G LG G D P +V
Sbjct: 523 -----QDRLASELVEEISCGASHVTVLTSRS-EVYTWGMGANGRLGHGDLKDRKKPCLV 575
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG + D T S V P P+ V ++ACG+ HV
Sbjct: 212 IESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALT 271
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E+ S V ++CG FHT
Sbjct: 272 TRQGEVF--------TWGEEFGGRLGHGTDADISRPKLVESL---SLTVVDLISCGEFHT 320
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T D+ W G G LG GT S +P++V + + ++SV CG +H
Sbjct: 321 CAVT---TSGDLFN---WGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWH 374
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ +S+G ++++ G LG +L + +A+S ++VA
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-------------KTIKVA 421
Query: 321 CGAAHT---VLVTDD------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ V VT+ KL++WG G LG G P V
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCV 471
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 112/276 (40%), Gaps = 60/276 (21%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
+++ SV G S ++G L+ +G +G F ++ + P V
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFG---------DGTFGVLGHGDRETLAYPKEVEALS 413
Query: 126 GHTVVKVACGSEHVVALV----SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
G +KVACG H A+V G + L Y+WG + +LG GD+E RL PK +
Sbjct: 414 GFKTIKVACGIWHSAAIVEVTNQTGANVMSKKL--YTWGDGDKNRLGHGDKEPRLVPKCV 471
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT------ 235
+ + + +++ CG T L R +T G NGQLG+ +
Sbjct: 472 QALLE---YNFHQLACGHNMTVALATSGR--------VFTMGSSSNGQLGNPKSDGKQPC 520
Query: 236 --QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
Q L E V+E + CG H +V++S +V++WGM N L +
Sbjct: 521 LVQDRLASELVEE---------ISCGASHVTVLTSRSEVYTWGM------GANGRLGHGD 565
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
D P L+ K + ++CG+ T +
Sbjct: 566 LKDRKKPCLV-----EALKDRHVKSISCGSNFTTCI 596
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG H ++ + G+V++WG E G LG +A ++R + +++S ++
Sbjct: 261 IACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVD--------- 311
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
++CG HT VT G L++WG G G+LG G + ++ P V P
Sbjct: 312 ----LISCGEFHTCAVTTSG-DLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGP 359
>gi|380018521|ref|XP_003693176.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Apis
florea]
Length = 1081
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 128/296 (43%), Gaps = 54/296 (18%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKVACG 135
G +LAI+ G L+ WG S+TEG L S +P V VV++ACG
Sbjct: 119 GAYHTLAINEWGQLFSWG------SNTEGQLGLNSKNFMESSPRMVKTLGTSVVVQIACG 172
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYE 194
+H AL + GE YSWG+N+ GQLGLG D + ++PK I F P A
Sbjct: 173 MKHAFALTNNGE--------LYSWGSNSEGQLGLGTDIKYEIKPKFISAF-IGIPIAF-- 221
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVY 252
+ CG +H+ ++ FG G+N GQLG TQ +P Q++ L Q
Sbjct: 222 IACGGYHSIAISKSGA----------VFGWGKNTFGQLGLNDTQDRNLPCQLQTL-QNAK 270
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ CG + ++ G V++ G + G G N L R S +
Sbjct: 271 ICYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNSNEILPRQVMELMGSTV------- 323
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG HT+ + ++++WG G +G LG T P +V P
Sbjct: 324 --------TQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNHSTRSVTTPQVVHGP 371
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 110/231 (47%), Gaps = 39/231 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDS 188
K SE V+A+ +K +D+ C WG+ +G+LGLG + E+ L P+ ++ F + +
Sbjct: 7 KRRLASEPVIAV--EYPLHKKKDMFC--WGSTIHGELGLGGIEDENILIPRELD-FKKAA 61
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--GTTQSALVPEQVKE 246
+ ++ CG +T ++T ++ G + GQLGH G + L+P
Sbjct: 62 --EIQQIACGENYTVVITQIGE--------IYSCGNNDYGQLGHEKGRKRLQLIPG---- 107
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILIS 304
L +V+ + CG +HT ++ G ++SWG E LGL + SP ++
Sbjct: 108 LDAFVFKKAA-CGAYHTLAINEWGQLFSWGSNTEGQLGLNSKNFMES-------SPRMVK 159
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
G VQ+ACG H +T++G +L+SWG G LG G I +
Sbjct: 160 TLGT-----SVVVQIACGMKHAFALTNNG-ELYSWGSNSEGQLGLGTDIKY 204
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 99/233 (42%), Gaps = 38/233 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ ++ACG + V + GE YS G N+ GQ LG + R R ++I +
Sbjct: 63 IQQIACGENYTVVITQIGEI--------YSCGNNDYGQ--LGHEKGRKRLQLIPGLD--- 109
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKEL 247
+ + CG++HT + N+ + W G GQLG + P VK L
Sbjct: 110 AFVFKKAACGAYHTLAI------NEWGQLFSW--GSNTEGQLGLNSKNFMESSPRMVKTL 161
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISG 305
V +V + CG+ H +++ G+++SWG E LGL + I P IS
Sbjct: 162 GTSV-VVQIACGMKHAFALTNNGELYSWGSNSEGQLGLGTDIKY-------EIKPKFISA 213
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
F +ACG H++ ++ G ++ WG+ G LG T D P
Sbjct: 214 FIGIPIAF-----IACGGYHSIAISKSG-AVFGWGKNTFGQLGLNDTQDRNLP 260
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 76/177 (42%), Gaps = 29/177 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHT 128
I I + GG S+AI +GA++ WG +T G L + P +
Sbjct: 217 IPIAFIACGGYHSIAISKSGAVFGWG------KNTFGQLGLNDTQDRNLPCQLQTLQNAK 270
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ ACG E V L G ++ GA GQLG G + + P+ + +
Sbjct: 271 ICYAACGEEFSVFLTVDGGV--------FTCGAGMYGQLGHGSNSNEILPRQVMELMGST 322
Query: 189 PWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V +++CG HT AL+ R R + +GLG GQLG+ +T+S P+ V
Sbjct: 323 ---VTQISCGKRHTLALVPSRGR--------VYAWGLGGAGQLGNHSTRSVTTPQVV 368
>gi|357520083|ref|XP_003630330.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524352|gb|AET04806.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 279
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 113/234 (48%), Gaps = 33/234 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QD 187
V+ ++ G+ H VAL++ ++VC SWG +GQLG GD + RL P + F+ QD
Sbjct: 14 VLLISAGASHTVALLTG-------NVVC-SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQD 65
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ VTCG+ +T + K D+ +++G G+ G+LGHG +P ++ L
Sbjct: 66 ----IVSVTCGADYT--VARSKSGKDV-----YSWGWGDFGRLGHGDPSDLFIPHPIRAL 114
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q + + + CG H V+ V SWG + N L D+ P I
Sbjct: 115 -QGLRIKQISCGDCHCLAVTMENKVLSWGRNQ------NGELGLGTTKDSHVPQKILAF- 166
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + + VA GA H+V +T+DG L+ WG GR G LG G T D P V
Sbjct: 167 -EGIRIK---MVAAGAEHSVAITEDG-DLYGWGWGRYGNLGLGDTNDRLIPEKV 215
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/294 (25%), Positives = 128/294 (43%), Gaps = 39/294 (13%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+P + + AG ++A+ + WG + G P+ + F G +
Sbjct: 10 SPPHVLLISAGASHTVALLTGNVVCSWGR---GEDGQLGHGDTDDRLLPTKLSAFDGQDI 66
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V V CG+++ VA + G+D+ YSWG + G+LG GD P I
Sbjct: 67 VSVTCGADYTVA-----RSKSGKDV--YSWGWGDFGRLGHGDPSDLFIPHPIRALQ---G 116
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ +++CG H +T +E+ ++G +NG+LG GTT+ + VP+++ +
Sbjct: 117 LRIKQISCGDCHCLAVT--------MENKVLSWGRNQNGELGLGTTKDSHVPQKILAF-E 167
Query: 250 YVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + V G H+ ++ GD+ W WG LGL + D + P ++ +G
Sbjct: 168 GIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGL--------GDTNDRLIPEKVNIDG 219
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V V+CG HT+ ++ G L++ G + G LG G D P V
Sbjct: 220 ------DKIVMVSCGWRHTISISSSG-GLYTHGWSKYGQLGHGDFEDCLVPRKV 266
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 88/185 (47%), Gaps = 24/185 (12%)
Query: 180 IIETFNQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+I + SP V ++ G+ HT ALLT ++ ++G GE+GQLGHG T
Sbjct: 2 MIMSEKSASPPHVLLISAGASHTVALLT---------GNVVCSWGRGEDGQLGHGDTDDR 52
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEKGLGLCPNASLTRNEAGDA 297
L+P ++ +VSV CG +T S +G DV+SWG L + D
Sbjct: 53 LLPTKLSAFDGQ-DIVSVTCGADYTVARSKSGKDVYSWGWGD------FGRLGHGDPSDL 105
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
P I G + + Q++CG H + VT + K+ SWGR ++G LG G T D
Sbjct: 106 FIPHPI--RALQGLRIK---QISCGDCHCLAVTMEN-KVLSWGRNQNGELGLGTTKDSHV 159
Query: 358 PAIVL 362
P +L
Sbjct: 160 PQKIL 164
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 25/177 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVV 130
++I + G LA+ + WG + + E G S P + F G +
Sbjct: 117 LRIKQISCGDCHCLAVTMENKVLSWGR----NQNGELGLGTTKDSHVPQKILAFEGIRIK 172
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA G+EH VA+ G+ Y WG G LGLGD RL P E N D
Sbjct: 173 MVAAGAEHSVAITEDGD--------LYGWGWGRYGNLGLGDTNDRLIP---EKVNIDGD- 220
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V+CG HT ++ +T G + GQLGHG + LVP +V+ L
Sbjct: 221 KIVMVSCGWRHTISISS--------SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 269
>gi|149574281|ref|XP_001514757.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Ornithorhynchus anatinus]
Length = 4866
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 119/452 (26%), Positives = 184/452 (40%), Gaps = 81/452 (17%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P L+
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLVEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG--------AEERDEKLSS-------AMEEMKLLQS 411
T+ K GLD + G A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHL 761
Query: 412 KLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRSK 465
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 762 R-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATSI 814
Query: 466 LVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 815 LGRQAGPLRNLLFRLMDSSVPDEIQEVVIETL 846
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4099 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4155
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ + ++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4156 ADGKMF--------TFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4204
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4205 AVSTDG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4256
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4257 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVLA------GVVIED---VAVGA 4305
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ +T G +++WG G LG G T P ++
Sbjct: 4306 EHTLAITSTG-DVYAWGSNSEGQLGLGHTNHVREPTLI 4342
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4244 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLAGVV 4297
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +A+ S G+ Y +WG+N+ GQLGLG P +I +
Sbjct: 4298 IEDVAVGAEHTLAITSTGDVY--------AWGSNSEGQLGLGHTNHVREPTLITVLQGKN 4349
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4350 ---IRQISAGRCHSAAWT 4364
>gi|218188915|gb|EEC71342.1| hypothetical protein OsI_03406 [Oryza sativa Indica Group]
Length = 848
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 87/299 (29%), Positives = 140/299 (46%), Gaps = 50/299 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK 131
+ G + A+ +G L+ WG N L TE VS + P V G V+
Sbjct: 313 ISCGEFHTCAVTTSGDLFNWGDGSYNVGLLGCGTE-----VSYWLPKKVSGPLEGLQVLS 367
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H S+G+ Y++G G LG GDRE+ PK +E S +
Sbjct: 368 VACGSWHSALTTSSGK--------LYTFGDGTFGVLGHGDRETLAYPKEVEAL---SGFK 416
Query: 192 VYEVTCGSFHTALL---THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V CG +H+A + T++ N M + + +T+G G+ +LGHG + LVP+ V+ L
Sbjct: 417 TIKVACGIWHSAAIVEVTNQTGANVMSKKL-YTWGDGDKNRLGHGDKEPRLVPKCVQALL 475
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+Y + + CG T ++++G V++ +G N L N D P L+
Sbjct: 476 EYDFH-QLACGHNMTVALATSGRVFT------MGSSSNGQLG-NPKSDGKQPCLV----- 522
Query: 309 HGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CGA+H ++T ++++WG G +G LG G D P +V
Sbjct: 523 -----QDRLASELVEEISCGASHVTVLTSRS-EVYTWGMGANGRLGHGDLKDRKKPCLV 575
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 125/290 (43%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG + D T S V P P+ V ++ACG+ HV
Sbjct: 212 IESLGDVYVWGEVWTDVTPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIACGTRHVALT 271
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E+ S V ++CG FHT
Sbjct: 272 TRQGEVF--------TWGEEFGGRLGHGTDADISRPKLVESL---SLTVVDLISCGEFHT 320
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T D+ W G G LG GT S +P++V + + ++SV CG +H
Sbjct: 321 CAVT---TSGDLFN---WGDGSYNVGLLGCGTEVSYWLPKKVSGPLEGLQVLSVACGSWH 374
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ +S+G ++++ G LG +L + +A+S ++VA
Sbjct: 375 SALTTSSGKLYTFGDGTFGVLGHGDRETLAYPKEVEALSGF-------------KTIKVA 421
Query: 321 CGAAHT---VLVTDD------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ V VT+ KL++WG G LG G P V
Sbjct: 422 CGIWHSAAIVEVTNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCV 471
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/261 (24%), Positives = 109/261 (41%), Gaps = 30/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ SV G S ++G L+ +G+ G + P V G +K
Sbjct: 363 LQVLSVACGSWHSALTTSSGKLYTFGDGTF---GVLGHGDRETLAYPKEVEALSGFKTIK 419
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V G +++ Y+WG + +LG GD+E RL PK ++ +
Sbjct: 420 VACGIWHSAAIVEV-TNQTGANVMSKKLYTWGDGDKNRLGHGDKEPRLVPKCVQALLE-- 476
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +++ CG T L R +T G NGQLG+ + P V++
Sbjct: 477 -YDFHQLACGHNMTVALATSGR--------VFTMGSSSNGQLGNPKSDGKQ-PCLVQDRL 526
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + CG H +V++S +V++WGM N L + D P L+
Sbjct: 527 ASELVEEISCGASHVTVLTSRSEVYTWGMG------ANGRLGHGDLKDRKKPCLVE---- 576
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + ++CG+ T +
Sbjct: 577 -ALKDRHVKSISCGSNFTTCI 596
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 18/113 (15%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG H ++ + G+V++WG E G LG +A ++R + +++S ++
Sbjct: 261 IACGTRHVALTTRQGEVFTWGEEFGGRLGHGTDADISRPKLVESLSLTVVD--------- 311
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
++CG HT VT G L++WG G G+LG G + ++ P V P
Sbjct: 312 ----LISCGEFHTCAVTTSG-DLFNWGDGSYNVGLLGCGTEVSYWLPKKVSGP 359
>gi|348550629|ref|XP_003461134.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Cavia porcellus]
Length = 4725
Score = 92.4 bits (228), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 3930 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 3986
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 3987 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEVLQGHR--- 4035
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4036 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4086
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4087 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4134
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4135 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4186
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 116/243 (47%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 LPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 3982 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEVLQGHR 4035
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4036 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4086
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4087 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4137
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4138 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4189
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4190 --QGKKVN---RVACGSAHTL 4205
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 119/272 (43%), Gaps = 51/272 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G L S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYACGEA----TNGRLGLGLSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3055 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
Q Q+ CGA ++ +T G +W+W
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTW 3230
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 134/295 (45%), Gaps = 44/295 (14%)
Query: 61 EDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
EDD K + + I+ KA G+ S A +++WG L D GG PS
Sbjct: 2934 EDDDKGSSGSLIR---KKAAGLESAATIRT-KVFVWG---LNDKDQLGGLKGSKIKVPSF 2986
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PK 179
VV+VA GS+ + A+ G+ Y + G NG+LGLG + P+
Sbjct: 2987 SETLSALNVVQVAGGSKSLFAVTVEGKVY--------ACGEATNGRLGLGLSSGTVPIPR 3038
Query: 180 IIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
I S + V +V G H LT ++ +++G G++G+LGH + +
Sbjct: 3039 QITAL---SSYVVKKVAVHSGGRHATALT--------VDGKVFSWGEGDDGKLGHFSRMN 3087
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
P ++ L + + + CG H++ ++S+G++++WG+ + L +
Sbjct: 3088 CDKPRLIEAL-KTKRIRDIACGSSHSAALTSSGELYTWGLGE------YGRLGHGDNTTQ 3140
Query: 298 ISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ P ++ H +QVACG+ A T+ +TD+G ++SWG G G LG G
Sbjct: 3141 LKPKMVKVLLGH-----RVIQVACGSRDAQTLALTDEGL-VFSWGDGDFGKLGRG 3189
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P +++ G + + A+
Sbjct: 3836 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPIQLIGGEQTLFAVT 3892
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 3893 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 3943
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 3944 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 3994
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 3995 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEVLQGH-----RVVDIACGS 4043
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4044 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4071
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4077 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4133
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4134 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4185
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4186 VAALQGKK---VNRVACGSAHT 4204
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTLPLEEPKVISAFSGKQGGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3846 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPIQLIG 3883
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3884 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 3942
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 3943 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 3989
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 3990 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4028
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 68/141 (48%), Gaps = 12/141 (8%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 526
Query: 282 GLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L +L E P +IS +G G K V +ACG+ ++ +T +G +L++WG
Sbjct: 527 RLGHGDTLPLEE------PKVISAFSGKQGGKHV--VHIACGSTYSAAITAEG-ELYTWG 577
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
RG G LG G + D P +V
Sbjct: 578 RGNYGRLGHGSSEDEAIPMLV 598
>gi|27882442|gb|AAH44667.1| Herc2 protein, partial [Mus musculus]
Length = 1183
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 388 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 444
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 445 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 493
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 494 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 545
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 546 -LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 592
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 593 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 644
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 440 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 493
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 494 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 544
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 545 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 595
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 596 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 647
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 648 --QGKKVN---RVACGSAHTL 663
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 294 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 350
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ V V G H
Sbjct: 351 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESIQHVFIKKV-AVNSGGKHCL 401
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 402 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 452
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 453 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 501
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 502 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 529
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 529 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 585
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y+WG N+ GQLG G +
Sbjct: 586 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNA 637
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 638 IQRPRLVAALQGKK---VNRVACGSAHT 662
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 304 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 341
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 342 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 400
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 401 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 447
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 448 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 486
>gi|296134345|ref|YP_003641592.1| Ig domain-containing protein group 2 domain-containing protein
[Thermincola potens JR]
gi|296032923|gb|ADG83691.1| Ig domain protein group 2 domain protein [Thermincola potens JR]
Length = 4140
Score = 92.0 bits (227), Expect = 6e-16, Method: Composition-based stats.
Identities = 85/289 (29%), Positives = 121/289 (41%), Gaps = 50/289 (17%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSST--EGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+V +G SLA+ G +W WG + D GG L P V G V +A
Sbjct: 2447 AVYSGTGYSLALKPDGTVWAWG---INDQGQLGNGGQDLNPHKNPEQVPGLTG--VTALA 2501
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G HVVAL + G ++WG N++GQLG G SR P + V
Sbjct: 2502 PGGYHVVALKNDG--------TVWTWGKNDSGQLGDGTYTSRFSPGQVPGLT-----GVK 2548
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V G+ HT +L + W +G GQLG + A V ++P +
Sbjct: 2549 AVAAGANHTVVLK--------TDGTVWAWGNNMYGQLGTSPSVLAKTYSPV-QIPGIDSV 2599
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAI--SPILISGNGPH 309
V + G++HT + G VW+WG +E +G N + A+ SP +SG
Sbjct: 2600 VEIGAGIWHTLARRADGTVWAWGRNIEGQVG---------NGSASAVVDSPAQVSG---- 2646
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+VA G H + + DG +W+WGR G LGTG T+ P
Sbjct: 2647 ---LTGVTKVAAGGYHNLALRSDG-TVWAWGRNDKGQLGTGNTVSSNVP 2691
Score = 68.9 bits (167), Expect = 6e-09, Method: Composition-based stats.
Identities = 62/205 (30%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ GG +A+ N G +W WG DS G + S F+P V G V VA
Sbjct: 2497 VTALAPGGYHVVALKNDGTVWTWGK---NDSGQLGDGTYTSRFSPGQVPGLTG--VKAVA 2551
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H V L + G ++WG N GQLG ++ DS V
Sbjct: 2552 AGANHTVVLKTDG--------TVWAWGNNMYGQLGTSPSVLAKTYSPVQIPGIDS---VV 2600
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV--PEQVKELPQYV 251
E+ G +HT L R + W +G GQ+G+G+ SA+V P QV L
Sbjct: 2601 EIGAGIWHT--LARRA------DGTVWAWGRNIEGQVGNGSA-SAVVDSPAQVSGLTG-- 2649
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
+ V G +H + S G VW+WG
Sbjct: 2650 -VTKVAAGGYHNLALRSDGTVWAWG 2673
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 46/171 (26%), Positives = 72/171 (42%), Gaps = 25/171 (14%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
+V AG ++ + G +W WGN T V + T SPV +VV++ G
Sbjct: 2549 AVAAGANHTVVLKTDGTVWAWGNNMYGQLGTSPS---VLAKTYSPVQIPGIDSVVEIGAG 2605
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW-AVYE 194
H +A + D ++WG N GQ+G G + ++++ Q S V +
Sbjct: 2606 IWHTLA--------RRADGTVWAWGRNIEGQVGNGSASA-----VVDSPAQVSGLTGVTK 2652
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V G +H L + W +G + GQLG G T S+ VP Q +
Sbjct: 2653 VAAGGYHNLALRS--------DGTVWAWGRNDKGQLGTGNTVSSNVPVQTR 2695
Score = 42.7 bits (99), Expect = 0.49, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 47/113 (41%), Gaps = 14/113 (12%)
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
+V G ++ + G VW+WG+ N G ++P N P
Sbjct: 2447 AVYSGTGYSLALKPDGTVWAWGI--------NDQGQLGNGGQDLNP---HKNPEQVPGLT 2495
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
+A G H V + +DG +W+WG+ SG LG G F+P V P LT
Sbjct: 2496 GVTALAPGGYHVVALKNDG-TVWTWGKNDSGQLGDGTYTSRFSPGQV--PGLT 2545
Score = 42.4 bits (98), Expect = 0.51, Method: Composition-based stats.
Identities = 46/172 (26%), Positives = 74/172 (43%), Gaps = 36/172 (20%)
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
F+ V+ P P + +A G++H +A+ +G D WGAN++GQLG
Sbjct: 1938 FTTVAENAPPPPF-------TDIAAGTDHSMAV-------RG-DSALVGWGANDDGQLGD 1982
Query: 170 GDRESRLRPKIIETFNQDSPW--AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G + ++ +PW + ++ GS HTA+L + W++G
Sbjct: 1983 GHFGEPVPYPVLVRNADGTPWNPVLSGMSPGSTHTAVLGS--------DGSVWSWGNNAF 2034
Query: 228 GQLGHGTTQSA------LVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSA 269
GQLG+G+ +A L P + K LP Y + D HT+ V S
Sbjct: 2035 GQLGNGSYATAGPPFSKLTPVKAK-LPGDDFVYTTVYQADYTGTHTNTVVSG 2085
>gi|119578072|gb|EAW57668.1| hCG2006901, isoform CRA_e [Homo sapiens]
Length = 2948
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 443 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 494
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 495 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 546
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 547 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 599
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 600 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 651
Query: 348 GTG 350
G G
Sbjct: 652 GHG 654
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 574 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 630
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 631 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 679
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 680 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 728
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 729 ACGPAQSFAWSSCSE-WSIGLR 749
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 479 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 538
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 539 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 586
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 587 QVWSWGDGDYGKLGRGGSDGCKTPKLI 613
Score = 45.8 bits (107), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 428 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 486
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 487 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 539
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 540 GNYGRLGHGSSEDEAIPMLV 559
>gi|301767480|ref|XP_002919156.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like
[Ailuropoda melanoleuca]
Length = 551
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVTEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q V++ CG + V + G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P I+ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRIA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ PA V+
Sbjct: 295 SNQSYPAPVI 304
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VTEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ CG + + + + +G NGQLG G++ + P ++ L
Sbjct: 206 --VAVNIACGQMCSMAVVNTGE--------VYVWGYNGNGQLGLGSSGNQPTPCRIAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------APVIVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S VL T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVSWRLLSVE 373
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVVKV 132
++ G M S+A+ N G +++WG + G L SS TP + G V +V
Sbjct: 209 NIACGQMCSMAVVNTGEVYVWG------YNGNGQLGLGSSGNQPTPCRIAALQGIRVQRV 262
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIE 182
ACG H + L G+ Y +WGAN+ GQLG G++ +S P I+E
Sbjct: 263 ACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPAPVIVE 306
>gi|390336982|ref|XP_795107.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1391
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 38/244 (15%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFT--PSPVW 122
H A + V G + S+A+ G L+ WG+ +T G +LV+++T P+ +
Sbjct: 137 HLASYQFVKVCCGSLHSMALTRDGRLFSWGD------NTYGQLGIGTLVTNYTDRPTELT 190
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
G +V+VACG H AL +G + WG N+ GQLGLG++E++ P ++
Sbjct: 191 SLRGVPLVRVACGGFHSFALTISGSVF--------GWGKNDVGQLGLGNKENKAYPTLLR 242
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
V + CG HTA+LT + + FG G GQLGHG+ + + P
Sbjct: 243 NMRSQ---MVKHIACGQDHTAMLT--------ADGGVFLFGQGSEGQLGHGSNYNEVNPR 291
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVS-SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
+V +L + V CG HT V+ S G ++++G +G+ + L ++EA +P
Sbjct: 292 KVIDL-MGSDITQVTCGKHHTLVLEGSKGRLYAFG--QGI----HGQLGQDEARSCSNPQ 344
Query: 302 LISG 305
+ G
Sbjct: 345 RVPG 348
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 38/244 (15%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFT--PSPVW 122
H A + V G + S+A+ G L+ WG+ +T G +LV+++T P+ +
Sbjct: 477 HLASYQFVKVCCGSLHSMALTRDGRLFSWGD------NTYGQLGIGTLVTNYTDRPTELT 530
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
G +V+VACG H AL +G + WG N+ GQLGLG++E++ P ++
Sbjct: 531 SLRGVPLVRVACGGFHSFALTISGSVF--------GWGKNDVGQLGLGNKENKSYPTLLR 582
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
V + CG HTA+LT + + FG G GQLGHG+ + + P
Sbjct: 583 NMRSQ---MVKHIACGQDHTAMLT--------ADGGVFLFGQGSEGQLGHGSNYNEVNPR 631
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVS-SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
+V +L + V CG HT V+ S G ++++G +G+ + L ++EA +P
Sbjct: 632 KVIDL-MGSDITQVTCGKHHTLVLEGSKGRLYAFG--QGI----HGQLGQDEARSCSNPQ 684
Query: 302 LISG 305
+ G
Sbjct: 685 RVPG 688
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 110/246 (44%), Gaps = 50/246 (20%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL--GDRESRLRPKIIETFN 185
+ VACG +H +A+ + + WG N+ GQ GL GD E++ RP+I+
Sbjct: 428 VIKHVACGDDHTLAV--------SDRVQVLGWGRNDRGQCGLATGDIENKPRPRILRHL- 478
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT--TQSALVPEQ 243
+ + +V CGS H+ LT R +++G GQLG GT T P +
Sbjct: 479 --ASYQFVKVCCGSLHSMALTRDGR--------LFSWGDNTYGQLGIGTLVTNYTDRPTE 528
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNAS---LTRNEAGD 296
+ L + V LV V CG FH+ ++ +G V+ WG + GLG N S L RN
Sbjct: 529 LTSL-RGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKSYPTLLRNMRSQ 587
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ +ACG HT ++T DG ++ +G+G G LG G +
Sbjct: 588 MVK------------------HIACGQDHTAMLTADG-GVFLFGQGSEGQLGHGSNYNEV 628
Query: 357 APAIVL 362
P V+
Sbjct: 629 NPRKVI 634
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 87/338 (25%), Positives = 140/338 (41%), Gaps = 72/338 (21%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFTPSPVWDFHGHTVVK 131
++ S+ G + + + G L+M G ++++G + + P V +
Sbjct: 38 RVQSISCGKHHTGIVLDDGTLYMCG------ANSKGQLGQDRNQYKPVQVSALETVVIKH 91
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL--GDRESRLRPKIIETFNQDSP 189
VACG +H +A+ G+ WG N+ GQ GL GD E++ RP+I++ +
Sbjct: 92 VACGDDHTLAVSDRGQVL--------GWGRNDRGQCGLATGDIENKPRPRILKHL---AS 140
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT--TQSALVPEQVKEL 247
+ +V CGS H+ LT R +++G GQLG GT T P ++ L
Sbjct: 141 YQFVKVCCGSLHSMALTRDGR--------LFSWGDNTYGQLGIGTLVTNYTDRPTELTSL 192
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNA---SLTRNEAGDAISP 300
+ V LV V CG FH+ ++ +G V+ WG + GLG N +L RN +
Sbjct: 193 -RGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLGNKENKAYPTLLRNMRSQMVKH 251
Query: 301 I----------------LISGNGP-----HGPKFQ-------------DPVQVACGAAHT 326
I + G G HG + D QV CG HT
Sbjct: 252 IACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNPRKVIDLMGSDITQVTCGKHHT 311
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+++ +L+++G+G G LG + P V P
Sbjct: 312 LVLEGSKGRLYAFGQGIHGQLGQDEARSCSNPQRVPGP 349
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 89/200 (44%), Gaps = 21/200 (10%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
+ + WG++ GQLG+G + ++ + S V ++CG HT ++ +D
Sbjct: 1 MATFCWGSSMEGQLGIGITGGQTTQEVAKEVTTLSGQRVQSISCGKHHTGIVL-----DD 55
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
MC G GQLG Q P QV L + V + V CG HT VS G V
Sbjct: 56 GTLYMC---GANSKGQLGQDRNQYK--PVQVSAL-ETVVIKHVACGDDHTLAVSDRGQVL 109
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
WG G C L + + P ++ H +Q V+V CG+ H++ +T DG
Sbjct: 110 GWG-RNDRGQC---GLATGDIENKPRPRILK----HLASYQF-VKVCCGSLHSMALTRDG 160
Query: 334 YKLWSWGRGRSGVLGTGKTI 353
+L+SWG G LG G +
Sbjct: 161 -RLFSWGDNTYGQLGIGTLV 179
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 75/300 (25%), Positives = 114/300 (38%), Gaps = 94/300 (31%)
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG------------ 168
V G V ++CG H ++ G Y +C GAN+ GQLG
Sbjct: 31 VTTLSGQRVQSISCGKHHTGIVLDDGTLY-----MC---GANSKGQLGQDRNQYKPVQVS 82
Query: 169 ----------------------------------------LGDRESRLRPKIIETFNQDS 188
GD E++ RP+I++ +
Sbjct: 83 ALETVVIKHVACGDDHTLAVSDRGQVLGWGRNDRGQCGLATGDIENKPRPRILKHL---A 139
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT--TQSALVPEQVKE 246
+ +V CGS H+ LT R +++G GQLG GT T P ++
Sbjct: 140 SYQFVKVCCGSLHSMALTRDGR--------LFSWGDNTYGQLGIGTLVTNYTDRPTELTS 191
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPIL 302
L + V LV V CG FH+ ++ +G V+ WG + GLG N+ A +L
Sbjct: 192 L-RGVPLVRVACGGFHSFALTISGSVFGWGKNDVGQLGLG---------NKENKAYPTLL 241
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ Q +ACG HT ++T DG ++ +G+G G LG G + P V+
Sbjct: 242 ------RNMRSQMVKHIACGQDHTAMLTADG-GVFLFGQGSEGQLGHGSNYNEVNPRKVI 294
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 72/311 (23%), Positives = 112/311 (36%), Gaps = 43/311 (13%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAI--DNAGALWMWGNCPLPDSSTEGGFSLVSSFT---P 118
+K N P + ++++ + +A D+ L G L +EG S++ P
Sbjct: 231 NKENKAYPTLLRNMRSQMVKHIACGQDHTAMLTADGGVFLFGQGSEGQLGHGSNYNEVNP 290
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
V D G + +V CG H + L E KG Y++G +GQLG + S P
Sbjct: 291 RKVIDLMGSDITQVTCGKHHTLVL----EGSKGR---LYAFGQGIHGQLGQDEARSCSNP 343
Query: 179 KII---------ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT-------F 222
+ + N S V H T +D+ + + F
Sbjct: 344 QRVPGPWVPHSSTEKNSSSKGRVVRCIYAGGHHCFSTATNAADDIQIKLLFRDISTRIFF 403
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
L + V + V CG HT VS V WG G
Sbjct: 404 QLTXXX-----XXXXXXXXXXXXXXLETVVIKHVACGDDHTLAVSDRVQVLGWG-RNDRG 457
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
C L + + P ++ H +Q V+V CG+ H++ +T DG +L+SWG
Sbjct: 458 QC---GLATGDIENKPRPRILR----HLASYQF-VKVCCGSLHSMALTRDG-RLFSWGDN 508
Query: 343 RSGVLGTGKTI 353
G LG G +
Sbjct: 509 TYGQLGIGTLV 519
>gi|119578070|gb|EAW57666.1| hCG2006901, isoform CRA_c [Homo sapiens]
Length = 2984
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 472 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 523
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 524 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 575
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 576 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 628
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 629 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 680
Query: 348 GTG 350
G G
Sbjct: 681 GHG 683
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 603 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 659
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 660 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 708
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 709 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 757
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 758 ACGPAQSFAWSSCSE-WSIGLR 778
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 508 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 567
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 568 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 615
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 616 QVWSWGDGDYGKLGRGGSDGCKTPKLI 642
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 457 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 515
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 516 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 568
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 569 GNYGRLGHGSSEDEAIPMLV 588
>gi|395502621|ref|XP_003755677.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Sarcophilus
harrisii]
Length = 4865
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 184/452 (40%), Gaps = 81/452 (17%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVSEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG--------AEERDEKLSS-------AMEEMKLLQS 411
T+ K GLD + G A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDGVAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHL 761
Query: 412 KLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRSK 465
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 762 R-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATSI 814
Query: 466 LVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 815 LGRQAGPLRNLLFRLMDSSVPDEIQEVVIETL 846
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G V++++CG +H +
Sbjct: 4098 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVIQMSCGFKHSAVVT 4154
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4155 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4203
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4204 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4255
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4256 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4304
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P ++
Sbjct: 4305 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLI 4341
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ VS G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVSEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4243 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4296
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P +I +
Sbjct: 4297 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLITVLQGKN 4348
Query: 189 PWAVYEVTCGSFHTALLTHRKRP 211
+ +++ G H+A T P
Sbjct: 4349 ---IRQISAGRCHSAAWTASPVP 4368
>gi|47221092|emb|CAG12786.1| unnamed protein product [Tetraodon nigroviridis]
Length = 527
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 113/250 (45%), Gaps = 29/250 (11%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
L S+ P + G +V ++ G+ VA+ +A D +SWG N QLG G
Sbjct: 59 LQSTIEPRRIDALCGKKIVSLSYGTGPHVAIATA-------DGEVFSWGHNGYSQLGNGT 111
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
L P ++ T V EV CGS HT LT + + +G +GQ+G
Sbjct: 112 TNHGLTPALVSTNLLGKR--VIEVACGSHHTIALT--------TDGEVFAWGYNNSGQVG 161
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G+T + P +V Q +V++ CG + V +G+++ WG N L
Sbjct: 162 SGSTANQPTPRRVSSCLQNKAVVNIACGQLCSMAVLDSGEIYGWGYN------CNGQLGL 215
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
G+ +P I+ + +QVACG AHT+ +TD+G+ +++WG G LGTG
Sbjct: 216 GNNGNQQTPCRIA-----ALQGVSVIQVACGYAHTLALTDEGF-VYAWGANSYGQLGTGN 269
Query: 352 TIDFFAPAIV 361
+ P ++
Sbjct: 270 KCNQALPTLI 279
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 63/131 (48%), Gaps = 16/131 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ ++ G + S+A+ ++G ++ WG NC G + TP + G +V++V
Sbjct: 183 VVNIACGQLCSMAVLDSGEIYGWGYNCNGQLGLGNNG----NQQTPCRIAALQGVSVIQV 238
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H +AL G Y+WGAN+ GQLG G++ ++ P +I N D
Sbjct: 239 ACGYAHTLALTDEG--------FVYAWGANSYGQLGTGNKCNQALPTLI---NTDKERMA 287
Query: 193 YEVTCGSFHTA 203
C + HT+
Sbjct: 288 EVAACHTSHTS 298
>gi|426379401|ref|XP_004056386.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gorilla
gorilla gorilla]
Length = 4502
Score = 92.0 bits (227), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/286 (28%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V V+ G +H + ++ D ++++WG G G G +
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 3735 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 3791
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 3792 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 3840
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 3841 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 3892
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 3893 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 3941
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 3942 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTVV 3978
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 3880 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 3933
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 3934 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTVVTGLQGKN 3985
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 3986 ---VRQISAGRCHSAAWT 4000
>gi|322795632|gb|EFZ18311.1| hypothetical protein SINV_02346 [Solenopsis invicta]
Length = 3628
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 129/292 (44%), Gaps = 37/292 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG +LA+ G ++ WG + G + +S P + +
Sbjct: 2676 IKKVAVHSGGKHALALTQDGKVFSWGE---GEDGKLGHGNCISLDKPKLIEILKSKRIRD 2732
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ S GE Y+WG G+LG GD ++ RPK+++
Sbjct: 2733 IACGSGHSAAIASNGE--------LYTWGLGEYGRLGHGDTITQTRPKLVQALVGQR--- 2781
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V CGS T LT + +++G G+ G+LG G + P V L
Sbjct: 2782 VVQVACGSRDAQTMALT--------TDGCVYSWGDGDFGKLGRGGSDGCYTPLAVDRL-N 2832
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ ++ V+CG + ++ G+VW+WG KG L P L+ G
Sbjct: 2833 GLGVIQVECGAQFSLALTKYGEVWTWG--KG----DYFRLGHGNDHHVRKPTLV--EGLR 2884
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + VA GA H + VTD G ++++WG G G G T P++V
Sbjct: 2885 GKKI---IHVAVGALHCLAVTDTG-QVYAWGDNDHGQQGNGATSVNRKPSLV 2932
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 125/283 (44%), Gaps = 49/283 (17%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
PI + + A G LA+ G ++ WGN D G VS P + +V
Sbjct: 146 PITMIASHADGKHYLALTQDGCVYSWGN---GDGGRLGHGDTVSYDEPKLIESLLDKNIV 202
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+ACGS + AL ++GE Y+WG N G+LG G+ + L P ++ T +
Sbjct: 203 FIACGSTYSAALSASGE--------LYTWGRGNYGRLGHGNFDDVLTPTLVTTLKGHT-- 252
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V CGS + L + +++G G+ G+LG G T + P+ V +L
Sbjct: 253 -VVHVACGSGDSQTLCVTA------SGIVFSWGDGDYGKLGRGGTDGSKTPKIVDKLLD- 304
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +V V CG ++ +++ G+V++WG GDA L G+ H
Sbjct: 305 INVVKVFCGGQFSAALTAHGEVYTWG-----------------KGDAYR--LGHGSEEHV 345
Query: 311 --PKFQDPVQ------VACGAAHTVLVTDDGYKLWSWGRGRSG 345
PK + ++ ++ G H + +T+D + ++ WGR G
Sbjct: 346 RYPKVIESLRDKKIKDLSVGTTHILALTEDQF-VYGWGRNDYG 387
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 126/276 (45%), Gaps = 43/276 (15%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD--FHGHTVVKVACGSEHVVALVSAGETY 149
A+++WG L D GG L S P++ + +A GS+ + + G+
Sbjct: 2590 AVYVWG---LNDKDQLGG--LKGSKIKLPIYSEVLSKLKPIHIAGGSKTLFIVSQEGK-- 2642
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
Y+ G NG+LGLGD + PK I +Q V V G H LT
Sbjct: 2643 ------LYACGEGTNGRLGLGDDNNVCEPKAIPFLSQFVIKKV-AVHSGGKHALALTQ-- 2693
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +++G GE+G+LGHG S P+ + E+ + + + CG H++ ++S
Sbjct: 2694 ------DGKVFSWGEGEDGKLGHGNCISLDKPKLI-EILKSKRIRDIACGSGHSAAIASN 2746
Query: 270 GDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AH 325
G++++WG+ E G LG + TR + A+ Q VQVACG+ A
Sbjct: 2747 GELYTWGLGEYGRLGHGDTITQTRPKLVQALVG-------------QRVVQVACGSRDAQ 2793
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ +T DG ++SWG G G LG G + + P V
Sbjct: 2794 TMALTTDGC-VYSWGDGDFGKLGRGGSDGCYTPLAV 2828
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 107/257 (41%), Gaps = 52/257 (20%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
V F+ P+ T++ +H +AL +D YSWG + G+LG GD
Sbjct: 139 VHGFSDKPI------TMIASHADGKHYLALT--------QDGCVYSWGNGDGGRLGHGDT 184
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
S PK+IE+ + + + CGS ++A L+ +T+G G G+LGH
Sbjct: 185 VSYDEPKLIESLLDKN---IVFIACGSTYSAALS--------ASGELYTWGRGNYGRLGH 233
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G L P V L + +V V CG T V+++G V+SWG
Sbjct: 234 GNFDDVLTPTLVTTLKGHT-VVHVACGSGDSQTLCVTASGIVFSWG-------------- 278
Query: 291 RNEAGDAISPILISGNGPHGPKFQDP------VQVACGAAHTVLVTDDGYKLWSWGRGRS 344
GD +G PK D V+V CG + +T G ++++WG+G +
Sbjct: 279 ---DGDYGKLGRGGTDGSKTPKIVDKLLDINVVKVFCGGQFSAALTAHG-EVYTWGKGDA 334
Query: 345 GVLGTGKTIDFFAPAIV 361
LG G P ++
Sbjct: 335 YRLGHGSEEHVRYPKVI 351
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 55/129 (42%), Gaps = 14/129 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ V+ G SLA+ G +W WG D G + P+ V G ++ VA
Sbjct: 2836 VIQVECGAQFSLALTKYGEVWTWGK---GDYFRLGHGNDHHVRKPTLVEGLRGKKIIHVA 2892
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ G+ Y+WG N++GQ G G +P ++ V
Sbjct: 2893 VGALHCLAVTDTGQV--------YAWGDNDHGQQGNGATSVNRKPSLVHDLEDAR---VN 2941
Query: 194 EVTCGSFHT 202
V+CGS H+
Sbjct: 2942 RVSCGSSHS 2950
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 25/189 (13%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
C + M+L D G ++ WG+ D G +TP V +G V++V C
Sbjct: 2787 CGSRDAQTMALTTD--GCVYSWGD---GDFGKLGRGGSDGCYTPLAVDRLNGLGVIQVEC 2841
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G++ +AL GE ++WG + +LG G+ +P ++E +
Sbjct: 2842 GAQFSLALTKYGEV--------WTWGKGDYFRLGHGNDHHVRKPTLVEGLRGKK---IIH 2890
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V G+ H +T D + W G ++GQ G+G T P V +L + +
Sbjct: 2891 VAVGALHCLAVT------DTGQVYAW--GDNDHGQQGNGATSVNRKPSLVHDL-EDARVN 2941
Query: 255 SVDCGLFHT 263
V CG H+
Sbjct: 2942 RVSCGSSHS 2950
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 47/99 (47%), Gaps = 4/99 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V G + LA+ + G ++ WG+ D +G + + PS V D V +V
Sbjct: 2887 KIIHVAVGALHCLAVTDTGQVYAWGD---NDHGQQGNGATSVNRKPSLVHDLEDARVNRV 2943
Query: 133 ACGSEHVVALVSAGETYKG-EDLVCYSWGANNNGQLGLG 170
+CGS H +A V + G +D V + + GQ+ LG
Sbjct: 2944 SCGSSHSIAWVLVDQPSNGNQDPVTFPTVRDPLGQMCLG 2982
>gi|440800160|gb|ELR21203.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 417
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 112/231 (48%), Gaps = 36/231 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+VK+ G +H +AL GE Y WG + GQ GLG++E++ P +E F S
Sbjct: 142 IVKIRTGRQHGIALSKNGEVY--------IWGNSEFGQTGLGNKEAQHLPIRMEFFRDKS 193
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +V+CG H+A ++ R WT+G G +GQLGH T+ L P+++ +
Sbjct: 194 ---IVDVSCGLDHSAAVSKDGR--------VWTWGYGIDGQLGHNGTEDELKPKELTVI- 241
Query: 249 QYVYLVSVDCGLFHTSVVS-SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + V CG T +++ + G ++++G + L E G + P ++
Sbjct: 242 RGEGISRVTCGTDFTGLLNETEGRLFTFGNGEA------GQLGHGERGLCLEPSVVP--- 292
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ +VA G AH + +T DG + WSWG G G LG G T DF P
Sbjct: 293 -----LDNVKEVAAGGAHMLALTKDG-QAWSWGWGEDGRLGHGATEDFLKP 337
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 122/295 (41%), Gaps = 46/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I ++ G +A+ G +++WGN + G + + P + F ++V
Sbjct: 140 LGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQT---GLGNKEAQHLPIRMEFFRDKSIVD 196
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+CG +H A+ G ++WG +GQLG E L+PK + +
Sbjct: 197 VSCGLDHSAAVSKDGRV--------WTWGYGIDGQLGHNGTEDELKPKELTVIRGE---G 245
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-----EQVKE 246
+ VTCG+ T LL + E +TFG GE GQLGHG L P + VKE
Sbjct: 246 ISRVTCGTDFTGLL-------NETEGRLFTFGNGEAGQLGHGERGLCLEPSVVPLDNVKE 298
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
V G H ++ G WSWG + + L D + P I
Sbjct: 299 ---------VAAGGAHMLALTKDGQAWSWGWGE------DGRLGHGATEDFLKPEPIPTL 343
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
GP V V+ G H++ +T+ G +++ WG SG LG G P ++
Sbjct: 344 GP----AVGVVSVSAGGGHSLALTESG-QVYGWGFNASGRLGLGNESSVMTPTLI 393
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 68/181 (37%), Gaps = 43/181 (23%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+T G G N QLG G + +P V+ELP + G ++++ +++ WG
Sbjct: 56 YTCGTGRNAQLGVGDLEDYQLPVPVQELPVGASYIDAAAGWTQNFLLTTRHELYYWGSSG 115
Query: 280 GLGLCPNASLTR---------------------NEAGDAISP---ILISGNGPHGPK--- 312
L P R + G A+S + I GN G
Sbjct: 116 VYALLPMRRDKRIYYPTLCEPAQSLGIVKIRTGRQHGIALSKNGEVYIWGNSEFGQTGLG 175
Query: 313 -------------FQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
F+D V V+CG H+ V+ DG ++W+WG G G LG T D
Sbjct: 176 NKEAQHLPIRMEFFRDKSIVDVSCGLDHSAAVSKDG-RVWTWGYGIDGQLGHNGTEDELK 234
Query: 358 P 358
P
Sbjct: 235 P 235
>gi|357620246|gb|EHJ72511.1| hypothetical protein KGM_11261 [Danaus plexippus]
Length = 4305
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 112/234 (47%), Gaps = 34/234 (14%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V V G +H +AL + G+ Y SWG +G+LG G+R + P++IE+ +
Sbjct: 3147 VAVHSGGKHALALTADGKVY--------SWGEGEDGKLGHGNRITLEAPRLIESLAGER- 3197
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + CGS H+A +T R +T+GLGE G+LGHG LVP+ V+ L
Sbjct: 3198 --VISIACGSAHSACVTAR--------GHLYTWGLGEYGRLGHGDDNIQLVPKMVEALAN 3247
Query: 250 YVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Y ++ V CG T +++ G V+SWG + G L R + P+ +
Sbjct: 3248 Y-RVIQVACGSRDAQTLALTACGKVFSWG-DGDFG-----KLGRGGSDGCAIPMNVERLN 3300
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G QV CGA ++ +T DG ++W+WG+G LG G P +V
Sbjct: 3301 SLG-----VTQVECGAQFSLALTRDG-EVWTWGKGDYFRLGHGCDAHVRRPTLV 3348
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 134/297 (45%), Gaps = 47/297 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ +V +GG +LA+ G ++ WG + G + ++ P + G V+
Sbjct: 3144 VRRVAVHSGGKHALALTADGKVYSWGE---GEDGKLGHGNRITLEAPRLIESLAGERVIS 3200
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H + + G Y+WG G+LG GD +L PK++E + +
Sbjct: 3201 IACGSAHSACVTARGHL--------YTWGLGEYGRLGHGDDNIQLVPKMVEAL---ANYR 3249
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMC---WTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + + + C +++G G+ G+LG G + +P V+ L
Sbjct: 3250 VIQVACGS---------RDAQTLALTACGKVFSWGDGDFGKLGRGGSDGCAIPMNVERL- 3299
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILIS 304
+ + V+CG + ++ G+VW+WG KG LG +A + R +A+
Sbjct: 3300 NSLGVTQVECGAQFSLALTRDGEVWTWG--KGDYFRLGHGCDAHVRRPTLVEAL------ 3351
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + + VA GA H + VT + ++W+WG G G G T PA+V
Sbjct: 3352 -------RGRRVIHVAVGALHCLAVTSEN-QVWAWGDNDHGQQGNGTTCVNRRPALV 3400
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 129/291 (44%), Gaps = 33/291 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + +GG LA+ G ++ WG + G + VS P + G VV
Sbjct: 4038 ITKVACNSGGKHCLALSADGEVYSWGE---GEDGKLGHGNRVSYDRPKLITALSGLEVVC 4094
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H L + G Y +WG G+LG GD E +L PK++E S +
Sbjct: 4095 IACGGAHSACLTARGRIY--------TWGKGRYGRLGHGDSEDQLIPKLVEAL---SSFR 4143
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L N W++G G+ G+LG G ++ +P ++ L + +
Sbjct: 4144 VIDVACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSEGCKLPMRIDCL-KGL 4196
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ V+CG + + G V++WG KG L P+ ++G
Sbjct: 4197 RVIKVECGSQFSVALCQCGSVYTWG--KG----DYHRLGHGSYEHVRRPMRVTGM----- 4245
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ + V +A G+ H V TD G ++++WG G LG G T+ P +++
Sbjct: 4246 QGKMIVSIATGSLHCVACTDTG-EVYTWGDNDEGQLGDGTTLAAQRPRLLM 4295
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 90/196 (45%), Gaps = 24/196 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++ G NG+LGLG + P+ + V V G H LT +
Sbjct: 3112 FACGEGTNGRLGLGHSNNVSTPRANPYLSHVLVRRV-AVHSGGKHALALT--------AD 3162
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G GE+G+LGHG + P ++ L ++S+ CG H++ V++ G +++WG
Sbjct: 3163 GKVYSWGEGEDGKLGHGNRITLEAPRLIESLAGE-RVISIACGSAHSACVTARGHLYTWG 3221
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
+ + L + + P ++ + +QVACG+ A T+ +T G
Sbjct: 3222 LGE------YGRLGHGDDNIQLVPKMVEALANY-----RVIQVACGSRDAQTLALTACG- 3269
Query: 335 KLWSWGRGRSGVLGTG 350
K++SWG G G LG G
Sbjct: 3270 KVFSWGDGDFGKLGRG 3285
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 65/266 (24%), Positives = 100/266 (37%), Gaps = 54/266 (20%)
Query: 55 GAPDSLEDDSKTNHKAP------IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG 108
GA +L D+ T H P I S + G L + G W WG + + G
Sbjct: 502 GAVYTLPYDTMTPHLVPGLESKTITQVSCHSLGRHYLCRSSCGGAWSWG---IGEDGRLG 558
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ P P+ H VV+VA G + S G Y+WG G+LG
Sbjct: 559 HGDTAARDAPQPLHHLAHHEVVRVAAGLACSAVITSRG--------ALYTWGRGAQGRLG 610
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL-----------------THRK-- 209
G E+ L P+ + +FN + + +V G + L T R
Sbjct: 611 HGTIENCLTPQPV-SFNAHNIERIIDVALGWGEGSTLCCTWEGAVQVFGEGEAGTPRALS 669
Query: 210 -----RPNDMLESMCW-----------TFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
R + W T+G G+ +LGHG +S +P+ V+ L Q + +
Sbjct: 670 ALAMFRVTRVYTGEHWHAALTDGGQVYTWGKGDGYRLGHGNMESTKIPKLVEAL-QGIKI 728
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEK 279
V + G H +SS G ++ WG +
Sbjct: 729 VDLSLGASHGIALSSEGVLFVWGTHE 754
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 18/117 (15%)
Query: 249 QYVYLVSVDC--GLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILIS 304
Q+V++ V C G H +S+ G+V+SWG E G LG S R + A+S + +
Sbjct: 4034 QHVFITKVACNSGGKHCLALSADGEVYSWGEGEDGKLGHGNRVSYDRPKLITALSGLEV- 4092
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V +ACG AH+ +T G ++++WG+GR G LG G + D P +V
Sbjct: 4093 ------------VCIACGGAHSACLTARG-RIYTWGKGRYGRLGHGDSEDQLIPKLV 4136
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 66/169 (39%), Gaps = 22/169 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +L I + +W WG+ D G P + G V+KV CGS+
Sbjct: 4151 SGDAQTLCITDDDNVWSWGD---GDYGKLGRGGSEGCKLPMRIDCLKGLRVIKVECGSQF 4207
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL G Y +WG + +LG G E RP + + + G
Sbjct: 4208 SVALCQCGSVY--------TWGKGDYHRLGHGSYEHVRRPMRVTGMQGK---MIVSIATG 4256
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
S H T D E +T+G + GQLG GTT +A P + L
Sbjct: 4257 SLHCVACT------DTGE--VYTWGDNDEGQLGDGTTLAAQRPRLLMAL 4297
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 12/100 (12%)
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H SS G WSWG+ + L + R DA P+ H + V+VA
Sbjct: 536 HYLCRSSCGGAWSWGIGEDGRLGHGDTAAR----DAPQPL-------HHLAHHEVVRVAA 584
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G A + ++T G L++WGRG G LG G + P V
Sbjct: 585 GLACSAVITSRG-ALYTWGRGAQGRLGHGTIENCLTPQPV 623
>gi|156406658|ref|XP_001641162.1| predicted protein [Nematostella vectensis]
gi|156228299|gb|EDO49099.1| predicted protein [Nematostella vectensis]
Length = 596
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 127/287 (44%), Gaps = 26/287 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V G +LA+ G ++ WG+ G L FTP + + +VA
Sbjct: 242 IRKVACGATHTLALSKDGEVFSWGS---GYGGRLGQGHLRDRFTPIRICGLESLNLTQVA 298
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
C H A+ + + +S+G N+ GQLG+ E +L I+ + S +
Sbjct: 299 CNEFHSAAVCACSKQG-----ALFSFGENDYGQLGI--PEDKLLTSYIQCVSSLSEHKIS 351
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE--QVKELPQYV 251
V CGSFH+A L W +G E+GQLG+G S +P + ++
Sbjct: 352 RVACGSFHSAALAE--------HGSLWLWGCNESGQLGNGNYTSTSLPSLLEAGNDLRHD 403
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ V CG H++ ++ G ++ G L A L N+ + + P
Sbjct: 404 AVMEVACGDQHSAFITKKGRMFCCGDNTYGQL--GAHLNDNQDDHVTYNVAVRVRVP--T 459
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
F+ V VACG +HT +VTD G ++++WGRG+ G LG G ++ P
Sbjct: 460 DFR-CVHVACGDSHTAVVTDGG-EIFTWGRGKGGRLGHGDNLNRHLP 504
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 82/267 (30%), Positives = 113/267 (42%), Gaps = 49/267 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H A + CS K G + S ++ G L +P+ L++S+ V H
Sbjct: 303 HSAAVCACS-KQGALFSFGENDYGQL------GIPEDK------LLTSYIQC-VSSLSEH 348
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VACGS H AL G + WG N +GQLG G+ S P ++E N
Sbjct: 349 KISRVACGSFHSAALAEHGSLWL--------WGCNESGQLGNGNYTSTSLPSLLEAGNDL 400
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGH--GTTQSALVPEQ 243
AV EV CG H+A +T + R F G+N GQLG Q V
Sbjct: 401 RHDAVMEVACGDQHSAFITKKGR----------MFCCGDNTYGQLGAHLNDNQDDHVTYN 450
Query: 244 VK---ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
V +P V V CG HT+VV+ G++++WG KG L +L R+ +
Sbjct: 451 VAVRVRVPTDFRCVHVACGDSHTAVVTDGGEIFTWGRGKGGRLGHGDNLNRHLP----TE 506
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTV 327
I I G H V+CG AHT
Sbjct: 507 IEIGMEGKH------VRGVSCGRAHTA 527
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 34/212 (16%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+WG NG LG G+ P ++E +D + +V CG+ HT L+
Sbjct: 210 YTWGEGTNGMLGHGEDTQEAHPHVVEALLGKD----IRKVACGATHTLALSK-------- 257
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV---SSAGDV 272
+ +++G G G+LG G + P ++ L + + L V C FH++ V S G +
Sbjct: 258 DGEVFSWGSGYGGRLGQGHLRDRFTPIRICGL-ESLNLTQVACNEFHSAAVCACSKQGAL 316
Query: 273 WSWGMEK--GLGLCPNASLTRN-EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
+S+G LG+ + LT + ++S IS +VACG+ H+ +
Sbjct: 317 FSFGENDYGQLGIPEDKLLTSYIQCVSSLSEHKIS-------------RVACGSFHSAAL 363
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G LW WG SG LG G P+++
Sbjct: 364 AEHG-SLWLWGCNESGQLGNGNYTSTSLPSLL 394
>gi|119578071|gb|EAW57667.1| hCG2006901, isoform CRA_d [Homo sapiens]
Length = 1677
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 472 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 523
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 524 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 575
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 576 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 628
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 629 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 680
Query: 348 GTG 350
G G
Sbjct: 681 GHG 683
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 603 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 659
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 660 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 708
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 709 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 757
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 758 ACGPAQSFAWSSCSE-WSIGLR 778
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 21/149 (14%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 508 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 565
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 566 WGRGN------YGRLGHGSSEDEAIPMLVAG--LKGLKVID---VACGSGDAQTLAVTEN 614
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 615 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 642
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 457 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 515
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 516 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 568
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 569 GNYGRLGHGSSEDEAIPMLV 588
>gi|242004863|ref|XP_002423296.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
gi|212506298|gb|EEB10558.1| hypothetical protein Phum_PHUM047680 [Pediculus humanus corporis]
Length = 1229
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 86/298 (28%), Positives = 129/298 (43%), Gaps = 44/298 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPV--WDFHGH 127
KI SV G A+ G ++ WG L T SL PSP+ +
Sbjct: 823 KINSVLNCGYGHTALIRNGTIYTWGQTVKGCLGQGPTMSRHSL-----PSPISLLNCFKL 877
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V+ VACG H AL + G Y+WG + GQLGLGD P++I + +
Sbjct: 878 EVLYVACGKNHTTALTNNG---------VYAWGCSKYGQLGLGDVYESPYPRLITSLANE 928
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V ++CG FHT LT + + + +G G +GQLG G +P V L
Sbjct: 929 N---VITLSCGQFHTLALTEKGQ--------VFAWGWGVHGQLGLGNIDDQRLPVCVNHL 977
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILI 303
V + + G H+ V+S G ++S+G + G G +S+ G + ILI
Sbjct: 978 KDQV-IKDIAAGHGHSLVLSDKGQIFSFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILI 1036
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ H ++CG H+ L+T G +++WGR G LG G + AP +
Sbjct: 1037 ATGYFHS--------ISCGCHHSALLTVSG-GVYTWGRSLDGQLGNGGHKEVTAPTQI 1085
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 73/266 (27%), Positives = 109/266 (40%), Gaps = 45/266 (16%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYS 158
C P + E +LV F ++V+ CG H AL+ G Y+
Sbjct: 803 CTTPQKTMESSGTLVELFNKKI------NSVLN--CGYGHT-ALIRNG--------TIYT 845
Query: 159 WGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG G LG G SR P I N +Y V CG HT LT+
Sbjct: 846 WGQTVKGCLGQGPTMSRHSLPSPISLLNCFKLEVLY-VACGKNHTTALTNNG-------- 896
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSW 275
+ +G + GQLG G + P + L ++++ CG FHT ++ G V W W
Sbjct: 897 -VYAWGCSKYGQLGLGDVYESPYPRLITSLANE-NVITLSCGQFHTLALTEKGQVFAWGW 954
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G+ LGL D P+ + + K Q +A G H+++++D G +
Sbjct: 955 GVHGQLGL--------GNIDDQRLPVCV-----NHLKDQVIKDIAAGHGHSLVLSDKG-Q 1000
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
++S+G G G LGTG T P ++
Sbjct: 1001 IFSFGSGVFGQLGTGNTTKSSVPVLI 1026
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/207 (22%), Positives = 83/207 (40%), Gaps = 24/207 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ G +LA+ G ++ WG G ++ P V + +A
Sbjct: 930 VITLSCGQFHTLALTEKGQVFAWG---WGVHGQLGLGNIDDQRLPVCVNHLKDQVIKDIA 986
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD----SP 189
G H + L G+ + S+G+ GQLG G+ P +I+ ++ +
Sbjct: 987 AGHGHSLVLSDKGQIF--------SFGSGVFGQLGTGNTTKSSVPVLIQGISEKIILIAT 1038
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ ++CG H+ALLT + +T+G +GQLG+G + P Q+ E
Sbjct: 1039 GYFHSISCGCHHSALLT--------VSGGVYTWGRSLDGQLGNGGHKEVTAPTQINENTF 1090
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+S C F + G ++ WG
Sbjct: 1091 KADCISCGCE-FTAAQEKQTGKIFCWG 1116
>gi|126272576|ref|XP_001362510.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Monodelphis domestica]
Length = 1049
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 118/276 (42%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ E+++ + P +++ + I+I + G SLA+
Sbjct: 113 DGQLGLPGT--------EEYIKV--PRNIKSLTD------IQIVQIACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG GF L S P + G ++VA G H L +G
Sbjct: 157 EVFSWGQN--KHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRFVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG GT + VP +K L + +V + CG +H+ +S +V+S
Sbjct: 104 QVYAW--GLDTDGQLGLPGTEEYIKVPRNIKSLTD-IQIVQIACGYYHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L L A I +L G F +QVA G AH+ ++T G
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLL-------GIPF---MQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D F P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLL 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG D+ + G + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG----LDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
+ACG H +AL E + SWG N +GQLGLG + +S+ P++I++ P+
Sbjct: 142 IACGYYHSLALSKGSEVF--------SWGQNKHGQLGLGFELKSQSAPQLIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V G H+ +LT L + +G + GQLG VP +K L +
Sbjct: 193 M--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV------- 288
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 --FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLGTGKTIDF 355
++WG G LG T ++
Sbjct: 106 YAWGLDTDGQLGLPGTEEY 124
>gi|126272574|ref|XP_001362426.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Monodelphis domestica]
Length = 1057
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 118/276 (42%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ E+++ + P +++ + I+I + G SLA+
Sbjct: 113 DGQLGLPGT--------EEYIKV--PRNIKSLTD------IQIVQIACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG GF L S P + G ++VA G H L +G
Sbjct: 157 EVFSWGQN--KHGQLGLGFELKSQSAPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRFVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG GT + VP +K L + +V + CG +H+ +S +V+S
Sbjct: 104 QVYAW--GLDTDGQLGLPGTEEYIKVPRNIKSLTD-IQIVQIACGYYHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L L A I +L G F +QVA G AH+ ++T G
Sbjct: 161 WGQNKHGQLGLGFELKSQSAPQLIKSLL-------GIPF---MQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D F P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLL 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 132/295 (44%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG D+ + G + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG----LDTDGQLGLPGTEEYIKVPRNIKSLTDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
+ACG H +AL E + SWG N +GQLGLG + +S+ P++I++ P+
Sbjct: 142 IACGYYHSLALSKGSEVF--------SWGQNKHGQLGLGFELKSQSAPQLIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V G H+ +LT L + +G + GQLG VP +K L +
Sbjct: 193 M--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV------- 288
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 --FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLGTGKTIDF 355
++WG G LG T ++
Sbjct: 106 YAWGLDTDGQLGLPGTEEY 124
>gi|375010994|ref|YP_004987982.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
gi|359346918|gb|AEV31337.1| Regulator of chromosome condensation (RCC1) repeat protein
[Owenweeksia hongkongensis DSM 17368]
Length = 440
Score = 91.7 bits (226), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/347 (24%), Positives = 152/347 (43%), Gaps = 47/347 (13%)
Query: 21 FICYTSLNCCMDGQLGFSGS-NSLVPCVIEQFLTIGAPD--SLEDDSKTNHKAPI----- 72
FI TSL+ C Q+ +G+ +++V + T+G + + D + +H P
Sbjct: 8 FILLTSLSFCTAAQMVDAGNGHAIVLDKDGKVFTMGRNNYGQIGDSTYEDHNTPYHVERL 67
Query: 73 -KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
KI + G SLAID G +W WG ++ + G ++ F +P + +
Sbjct: 68 PKIKIIARGYDHSLAIDEQGRVWAWGR----NNYGQLGSAIPIDFN-TPQLVVNHRDFIS 122
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V G H VAL ED ++WG N G+LG G RE P+ + ++ +
Sbjct: 123 VEGGHWHTVAL--------KEDGTVWTWGHNFYGELGDGTREHSQYPRSVVKKDKTTLQG 174
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ +HT L +++G + G+LGH E+V+ L
Sbjct: 175 IVKIVSVGYHTLALDKNGE--------VYSWGSNDFGELGHFHNVIQHYAEKVEGLQN-- 224
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ S+ G H+ ++ G+++ WG + ++ R D + I+ + P
Sbjct: 225 -IKSIAVGWHHSVAINENGELFMWGSDP-------STQVRESTSDHFNSIVKIDSLP--- 273
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
V++ACG+ H++ + + G ++W WG R G+LGT TI + P
Sbjct: 274 ---PMVKIACGSWHSLAIDETG-QVWGWGNNRYGMLGTKDTISYTYP 316
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 71/173 (41%), Gaps = 30/173 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I S+ G S+AI+ G L+MWG+ P ST F+ + P +VK
Sbjct: 225 IKSIAVGWHHSVAINENGELFMWGSDPSTQVRESTSDHFNSIVKIDSLP-------PMVK 277
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H +A+ G+ + WG N G LG D S PK I F
Sbjct: 278 IACGSWHSLAIDETGQ--------VWGWGNNRYGMLGTKDTISYTYPKKIPGFK-----G 324
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ E+ G F + + + +TFG +GQ G G VP ++
Sbjct: 325 IEEIGGGCFQSLAIDKKGD--------FYTFGGNASGQQGQGDFAYIFVPTKL 369
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 89/224 (39%), Gaps = 40/224 (17%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P S+ KT + +KI SV G +LA+D G ++ WG+ D G F V
Sbjct: 161 PRSVVKKDKTTLQGIVKIVSV---GYHTLALDKNGEVYSWGSN---DFGELGHFHNVIQH 214
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
V + +A G H VA+ GE + WG+ D +++
Sbjct: 215 YAEKVEGLQ--NIKSIAVGWHHSVAINENGE--------LFMWGS---------DPSTQV 255
Query: 177 RPKIIETFNQ----DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R + FN DS + ++ CGS+H+ + + W +G G LG
Sbjct: 256 RESTSDHFNSIVKIDSLPPMVKIACGSWHSLAIDETGQ--------VWGWGNNRYGMLGT 307
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
T S P K++P + + + G F + + GD +++G
Sbjct: 308 KDTISYTYP---KKIPGFKGIEEIGGGCFQSLAIDKKGDFYTFG 348
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 45/108 (41%), Gaps = 16/108 (14%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP-HGPKFQ 314
VD G H V+ G V++ G RN G N P H +
Sbjct: 23 VDAGNGHAIVLDKDGKVFTMG--------------RNNYGQIGDSTYEDHNTPYHVERLP 68
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+A G H++ + + G ++W+WGR G LG+ IDF P +V+
Sbjct: 69 KIKIIARGYDHSLAIDEQG-RVWAWGRNNYGQLGSAIPIDFNTPQLVV 115
>gi|224179015|gb|AAI72191.1| hect domain and RLD 2 [synthetic construct]
Length = 2427
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 78/149 (52%), Gaps = 21/149 (14%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ ++V V + CG +++ +++ G++++
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHV--VHIACGSTYSAAITAEGELYT 574
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG L + D P+L++G G K D VACG+ A T+ VT++
Sbjct: 575 WGRGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTEN 623
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P ++
Sbjct: 624 G-QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 45.4 bits (106), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>gi|428177727|gb|EKX46605.1| hypothetical protein GUITHDRAFT_48927, partial [Guillardia theta
CCMP2712]
Length = 316
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 113/249 (45%), Gaps = 32/249 (12%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
VSS TP + G V VACG H ++ +GE ++C WG N GQ G G +
Sbjct: 15 VSSSTPRMLKKAMGRQVRDVACGLVHSAMVMGSGE------VLC--WGENKYGQCGTGTQ 66
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
E P + + A V+CG HT +++ R +++GLG NGQLGH
Sbjct: 67 EQTEHPTFVGSL---FGVACMSVSCGGAHTVVVSEDGRV--------FSWGLGANGQLGH 115
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+ + P V+ + L +V CG+ HT +V + G++++ G K N
Sbjct: 116 GSRDNLTTPSVVQAMRGRDVL-AVTCGVGHTVIVLAGGELYTCGWNK------NGQCGVG 168
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
D +SP + G + +CGA HT +VT G +++++G G G LG G
Sbjct: 169 STSDLLSPQCVESLRGEGVQ-----HASCGAGHTAVVTGGG-EVFTFGSGSCGQLGHGDC 222
Query: 353 IDFFAPAIV 361
D P V
Sbjct: 223 QDLSMPRRV 231
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 115/261 (44%), Gaps = 45/261 (17%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V G + V+CG H V + ED +SWG NGQLG G R++
Sbjct: 72 PTFVGSLFGVACMSVSCGGAHTVVV--------SEDGRVFSWGLGANGQLGHGSRDNLTT 123
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P +++ V VTCG HT ++ + +T G +NGQ G G+T
Sbjct: 124 PSVVQAMRGRD---VLAVTCGVGHTVIV--------LAGGELYTCGWNKNGQCGVGSTSD 172
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNE 293
L P+ V+ L + + CG HT+VV+ G+V+++G + G G C + S+ R
Sbjct: 173 LLSPQCVESL-RGEGVQHASCGAGHTAVVTGGGEVFTFGSGSCGQLGHGDCQDLSMPRRV 231
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
A+ I++S VACG +TV D ++++ +G G LG T
Sbjct: 232 G--ALVGIVMS-------------MVACGEEYTVCAAFD-HRVFGFGLNNVGQLGASSTS 275
Query: 354 DFFAPAIVLWPPLTEEFKQDE 374
+ L P EF ++E
Sbjct: 276 HPY-----LSEPRQMEFLKEE 291
>gi|344239412|gb|EGV95515.1| putative E3 ubiquitin-protein ligase HERC2 [Cricetulus griseus]
Length = 958
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 310 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 366
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y +WG G+LG D E +L+PK++E
Sbjct: 367 VAAGGAHSACVTAAGDLY--------TWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 415
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 416 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 467
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 468 -LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 514
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 515 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 566
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 362 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 415
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 416 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 466
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 467 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 517
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 518 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA- 568
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 569 -LQGKKVN---RVACGSAHTL 585
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 216 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 272
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 273 ADGKL--------YATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 323
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 324 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 374
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 375 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 423
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 424 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 451
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 61/148 (41%), Gaps = 14/148 (9%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 451 GGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDH 507
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G V+ +A GS H V GE Y+WG N+ GQLG G +
Sbjct: 508 VRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNA 559
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT 202
RP+++ V V CGS HT
Sbjct: 560 IQRPRLVAALQGKK---VNRVACGSAHT 584
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 226 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 263
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 264 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 322
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 323 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 369
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 370 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 408
>gi|148234239|ref|NP_001080313.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus laevis]
gi|28278605|gb|AAH44119.1| Chc1l-prov protein [Xenopus laevis]
Length = 526
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 114/252 (45%), Gaps = 35/252 (13%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S P + G +V ++ GS HVV + S GE Y SWG N QLG G
Sbjct: 60 SIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVY--------SWGHNAYSQLGNGST 111
Query: 173 ESRLRPKIIET--FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
L P + T N+ + + V CGS H+ +LT + + +G +GQ+
Sbjct: 112 NQALSPCQVSTNLINKKA----HSVACGSHHSMVLT--------CDGEVYAWGYNNSGQV 159
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G G+T + +P +V Q ++ + CG + V G+V++WG N L
Sbjct: 160 GSGSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNG------NGQLG 213
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+G+ +P I+ G + + QV CG AHT+ +TD+G +++WG G LGTG
Sbjct: 214 LGSSGNQPTPCRIA--ALQGIRVE---QVVCGYAHTLALTDEGV-MYAWGANSYGQLGTG 267
Query: 351 KTIDFFAPAIVL 362
+ P V+
Sbjct: 268 NKSNQSYPVQVI 279
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/333 (23%), Positives = 133/333 (39%), Gaps = 52/333 (15%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAG-GMMSLAIDNAGALWMWGNCPLPDSSTEGGF 110
L G S+ + + + + +I S+ G G + + + G ++ WG+ S G
Sbjct: 53 LGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY---SQLGNG 109
Query: 111 SLVSSFTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S + +P V + VACGS H + L GE Y +WG NN+GQ+G
Sbjct: 110 STNQALSPCQVSTNLINKKAHSVACGSHHSMVLTCDGEVY--------AWGYNNSGQVGS 161
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G ++ P+ + + Q+ V + CG + + D E W G NGQ
Sbjct: 162 GSTANQPIPRKVTSCLQNK--TVIGIACGQMSSMAVV------DNGEVYAW--GYNGNGQ 211
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCP 285
LG G++ + P ++ L Q + + V CG HT ++ G +++WG + G G
Sbjct: 212 LGLGSSGNQPTPCRIAAL-QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKS 270
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N S D + I+ AC ++HT +++ WG+ R
Sbjct: 271 NQSYPVQVIVDKERIVEIA---------------ACHSSHTSAAKSQSGQVYMWGQCRGQ 315
Query: 346 VLGTGKTIDF---------FAPAIVLWPPLTEE 369
+ T F F+ ++W L+ E
Sbjct: 316 SVITPHLTHFSCTDDVFACFSTPAIMWRLLSVE 348
>gi|281349737|gb|EFB25321.1| hypothetical protein PANDA_007753 [Ailuropoda melanoleuca]
Length = 527
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 113 NHGLVPCHIST--NLSNKQVTEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q V++ CG + V + G+V+ WG N L
Sbjct: 163 GSTANQPIPRRVTGCLQNKVAVNIACGQMCSMAVVNTGEVYVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P I+ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 SSGNQPTPCRIA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 270
Query: 353 IDFFAPAIVL 362
+ PA V+
Sbjct: 271 SNQSYPAPVI 280
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VTEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ CG + + + + +G NGQLG G++ + P ++ L
Sbjct: 182 --VAVNIACGQMCSMAVVNTGE--------VYVWGYNGNGQLGLGSSGNQPTPCRIAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------APVIVE 282
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S VL T
Sbjct: 283 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 335
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 336 FATPAVSWRLLSVE 349
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 55/112 (49%), Gaps = 19/112 (16%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVVKV 132
++ G M S+A+ N G +++WG + G L SS TP + G V +V
Sbjct: 185 NIACGQMCSMAVVNTGEVYVWG------YNGNGQLGLGSSGNQPTPCRIAALQGIRVQRV 238
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIE 182
ACG H + L G+ Y +WGAN+ GQLG G++ +S P I+E
Sbjct: 239 ACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPAPVIVE 282
>gi|395848168|ref|XP_003796731.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Otolemur
garnettii]
Length = 551
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS HVV + GE + +WG N QLG G
Sbjct: 85 STIEPRKLDSLSGKKIACLSYGSGPHVVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVIVTIACGQMCSMAVVDTGEVFVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P I+ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRIA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 111/256 (43%), Gaps = 51/256 (19%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + CG + + D E W G NGQLG G++ + P ++ L
Sbjct: 206 --VIVTIACGQMCSMAVV------DTGEVFVW--GYNGNGQLGLGSSGNQPTPCRIAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTI 353
+D V AC +AHT G ++ WG RG+S VL T
Sbjct: 307 ---------KDRVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPYLTHFSCTDDVF 357
Query: 354 DFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 358 ACFATPAVTWRLLSVE 373
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 61/133 (45%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
I ++ G M S+A+ + G +++WG + G L SS TP + G V
Sbjct: 207 IVTIACGQMCSMAVVDTGEVFVWG------YNGNGQLGLGSSGNQPTPCRIAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + +
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPVVV---EKDR 309
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 310 VIEIAACHSAHTS 322
>gi|118095631|ref|XP_413753.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Gallus
gallus]
Length = 4860
Score = 91.7 bits (226), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V ++ G +H + ++ D ++++WG G G G +
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 124/250 (49%), Gaps = 40/250 (16%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 4081 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 4132
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 4133 EE---VVQMSCGFKHSAVVT--------ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 4181
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWGMEK--GLGLCPNASLTRNEAGDAISPILI 303
L Y + V CGL HT VS+ G VW++G LGL + + + + D + I I
Sbjct: 4182 LEGY-QIGQVACGLNHTVAVSTDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGI 4240
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
+VACG +V +T DG+ ++++G+ R L G+ + P V
Sbjct: 4241 K-------------KVACGTQFSVALTKDGH-VYTFGQDRLIGLPEGRARNHNRPQQV-- 4284
Query: 364 PPLTEEFKQD 373
P L+ F +D
Sbjct: 4285 PVLSGVFIED 4294
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4093 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4149
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4150 ADGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTV 4198
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4199 AVSTDG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCG-IGIKKVACGTQFS 4250
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D +A GA
Sbjct: 4251 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVL------SGVFIED---IAVGA 4299
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ G +++WG G LG G T P ++
Sbjct: 4300 EHTLALSSTG-DVYAWGSNSEGQLGLGHTNHVREPTLI 4336
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ + G S + G L+ +GN D G + + P V G+ + +V
Sbjct: 4134 EVVQMSCGFKHSAVVTADGKLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQV 4190
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H VA+ + G + +++G + G+LGLG+ ++ P+ ++ +
Sbjct: 4191 ACGLNHTVAVSTDGS-------MVWAFGDGDYGKLGLGNSTAKSSPQKVDIL---CGIGI 4240
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CG+ + LT + +TFG L G ++ P+QV L V+
Sbjct: 4241 KKVACGTQFSVALTK--------DGHVYTFGQDRLIGLPEGRARNHNRPQQVPVL-SGVF 4291
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGL 283
+ + G HT +SS GDV++WG E LGL
Sbjct: 4292 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 4324
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4238 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLSGVF 4291
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +A G+EH +AL S G+ Y +WG+N+ GQLGLG P +I +
Sbjct: 4292 IEDIAVGAEHTLALSSTGDVY--------AWGSNSEGQLGLGHTNHVREPTLITVLQGKN 4343
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4344 ---IRQISAGRCHSAAWT 4358
>gi|408500692|ref|YP_006864611.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465516|gb|AFU71045.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1279
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/344 (25%), Positives = 134/344 (38%), Gaps = 72/344 (20%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+ V AGG S+ + + G + WGN L + P P T
Sbjct: 792 IRFDQVSAGGSFSIGVASDGNAYAWGNNKYGQLAQKPADVSMQKTPVRIPLPDGADSSFT 851
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII-ETFNQD 187
+VA G HV+A+ S G + YSWG N++GQLG G R P+ + +T Q
Sbjct: 852 YTQVAAGDSHVLAIGSNG--------IVYSWGRNDHGQLGDGTTTDRYNPQPVKDTGGQ- 902
Query: 188 SPWAVYEVTCGSFHTALL-----------------------THRKRPNDMLE-------- 216
P+ +V+ G +A + T RK P +
Sbjct: 903 -PFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTL 961
Query: 217 -----SMCWTF-------------GLGENGQLGHGTTQSALVPEQVKELPQYVYLVS-VD 257
S+ W+F G NGQLG+GT+ S LP + S +
Sbjct: 962 HAVQVSLNWSFVMALDADGNVYTWGYNTNGQLGNGTSDSTSYASNPARLPSQSFQASQIS 1021
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
G +H + + G+ W+WG G G + S + D P + N +
Sbjct: 1022 AGSWHALAIDTDGNTWTWGYN-GYGQLGDGSTS-----DKYKPQTVQ-NPTDTSQSLKAT 1074
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q++ G H+++V DG LW+WG +G LG G T++ PA +
Sbjct: 1075 QISAGVDHSLVVDRDG-SLWAWGWNSNGQLGIGNTVNQTKPATI 1117
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 118/287 (41%), Gaps = 30/287 (10%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV- 129
P K V AG S AID+ ++ WG+ T + + TP+ D G T+
Sbjct: 903 PFKAVQVSAGVADSAAIDSENRVYTWGSESTGKGQTPAYSTTRKNPTPAADPDNPGQTLH 962
Query: 130 -VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+V+ V+AL + G Y+WG N NGQLG G +S S
Sbjct: 963 AVQVSLNWSFVMALDADGN--------VYTWGYNTNGQLGNGTSDSTSYASNPARLPSQS 1014
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK--- 245
+ +++ GS+H + + WT+G GQLG G+T P+ V+
Sbjct: 1015 -FQASQISAGSWHALAID--------TDGNTWTWGYNGYGQLGDGSTSDKYKPQTVQNPT 1065
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ Q + + G+ H+ VV G +W+WG N L + P I
Sbjct: 1066 DTSQSLKATQISAGVDHSLVVDRDGSLWAWGWNS------NGQLGIGNTVNQTKPATIKD 1119
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
F+ V+ + G H++ + DG LW+WG + G LG +T
Sbjct: 1120 PANKAQTFK-AVRSSAGQLHSLAIRQDG-NLWAWGDNQYGQLGNNQT 1164
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 27/215 (12%)
Query: 85 LAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
+A+D G ++ WG N L + +++ S S+ P F +++ GS H +A
Sbjct: 974 MALDADGNVYTWGYNTNGQLGNGTSDS-TSYASNPARLPSQSFQ---ASQISAGSWHALA 1029
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS-PWAVYEVTCGSF 200
+ + G T+ +WG N GQLG G + +P+ ++ S +++ G
Sbjct: 1030 IDTDGNTW--------TWGYNGYGQLGDGSTSDKYKPQTVQNPTDTSQSLKATQISAGVD 1081
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE---LPQYVYLVSVD 257
H +L+ R + W +G NGQLG G T + P +K+ Q V
Sbjct: 1082 H-SLVVDR-------DGSLWAWGWNSNGQLGIGNTVNQTKPATIKDPANKAQTFKAVRSS 1133
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G H+ + G++W+WG + L N + TRN
Sbjct: 1134 AGQLHSLAIRQDGNLWAWGDNQYGQLGNNQTATRN 1168
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 95/230 (41%), Gaps = 32/230 (13%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP---KIIETFNQD 187
+V+ G H++A+ S G YSWG+N++GQLG G R P K + +QD
Sbjct: 238 QVSAGRGHILAVASDGN--------LYSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQD 289
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV--- 244
W + + G + L + +++G GQLG+ TT + PE V
Sbjct: 290 FTWV--QASAGYLFSVGLGS--------DGKLYSWGDNTYGQLGNNTTTAHYTPEPVNLP 339
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ P G H + S G+++SWG L + R+ P +
Sbjct: 340 QNAPSGFTWKQEAVGSLHALGLGSDGNLYSWGDNDHNQLGDGTTTERHAPIQVKMPSGV- 398
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P G ++ Q++ H++ + D + ++ WG G +GTG D
Sbjct: 399 ---PSGFAWK---QMSGWGWHSLALGSDNW-IYGWGANTRGEVGTGSITD 441
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 121/297 (40%), Gaps = 38/297 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG----H 127
I+ V AG LA+ + G L+ WG+ D G + P PV G
Sbjct: 234 IRFSQVSAGRGHILAVASDGNLYSWGSN---DHGQLGDGTTAERHEPVPVKKPQGVSQDF 290
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
T V+ + G V L G D YSWG N GQLG + P+ + Q+
Sbjct: 291 TWVQASAGYLFSVGL--------GSDGKLYSWGDNTYGQLGNNTTTAHYTPEPVN-LPQN 341
Query: 188 SP--WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+P + + GS H L + +++G ++ QLG GTT P QVK
Sbjct: 342 APSGFTWKQEAVGSLHALGLGS--------DGNLYSWGDNDHNQLGDGTTTERHAPIQVK 393
Query: 246 ---ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+P + +H+ + S ++ WG G S+T N+ I+P+
Sbjct: 394 MPSGVPSGFAWKQMSGWGWHSLALGSDNWIYGWGANT-RGEVGTGSITDNK----ITPVR 448
Query: 303 ISGNGPHG-PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
I+ P G P Q G ++ + DG +++WG G +G +G G T+D + P
Sbjct: 449 IAT--PQGVPSNFTWGQFQMGDYYSQAIGSDG-NIYTWGYGGNGNVGNGSTVDVYGP 502
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 68/148 (45%), Gaps = 11/148 (7%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKE---LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G ++GQLG GTT P VK+ + Q V G + + S G ++SWG
Sbjct: 256 YSWGSNDHGQLGDGTTAERHEPVPVKKPQGVSQDFTWVQASAGYLFSVGLGSDGKLYSWG 315
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
+ G N + T + + P+ + N P G ++ Q A G+ H + + DG L
Sbjct: 316 -DNTYGQLGNNTTTAHYTPE---PVNLPQNAPSGFTWK---QEAVGSLHALGLGSDG-NL 367
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+SWG LG G T + AP V P
Sbjct: 368 YSWGDNDHNQLGDGTTTERHAPIQVKMP 395
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 60/142 (42%), Gaps = 20/142 (14%)
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC-- 197
V+L+S G D YSWGANNNGQLG R P I Q++P + V
Sbjct: 520 VSLLSVASLAIGSDGNLYSWGANNNGQLGDNTTTQRNTP-IRVAAPQNAPTGLTWVQASA 578
Query: 198 ----GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
SF A + +++G NGQLG TT +P +V +P +
Sbjct: 579 GWDNNSFGLA-----------SDGNLYSWGKNANGQLGDNTTNDRHIPGRV-NMPGTTTV 626
Query: 254 VSVD-CGLFHTSVVSSAGDVWS 274
+V G T++ +A WS
Sbjct: 627 TAVSFGGTAGTNITRNADGTWS 648
>gi|432889733|ref|XP_004075335.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like [Oryzias
latipes]
Length = 527
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 113/251 (45%), Gaps = 31/251 (12%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
L S+ P + G +V ++ G+ HVV + GE + +WG N QLG G
Sbjct: 59 LQSTIEPRRIDVLCGKKIVSLSYGTGPHVVIATADGEVF--------AWGHNGYSQLGNG 110
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
L P ++ T V EV CGS HT LT + + +G +GQ+
Sbjct: 111 TTNHGLTPALVSTNLLGKR--VTEVACGSHHTIALT--------ADGEVFAWGYNNSGQV 160
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G G+T + P +V Q +V+V CG + V G+++ WG N L
Sbjct: 161 GSGSTANQPTPRRVSSCLQSKVVVNVGCGQLCSMAVLDNGEIYGWGYN------CNGQLG 214
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
G+ +P I+ + + VQVACG AHT+ +TD+G+ +++WG G LGTG
Sbjct: 215 LGNNGNQQTPCRIA-----ALQGVNVVQVACGYAHTLALTDEGF-VYAWGANSYGQLGTG 268
Query: 351 KTIDFFAPAIV 361
+ P ++
Sbjct: 269 NKSNQALPTLI 279
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 16/131 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ +V G + S+A+ + G ++ WG NC G + TP + G VV+V
Sbjct: 183 VVNVGCGQLCSMAVLDNGEIYGWGYNCNGQLGLGNNG----NQQTPCRIAALQGVNVVQV 238
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H +AL G Y+WGAN+ GQLG G++ ++ P +I N D V
Sbjct: 239 ACGYAHTLALTDEG--------FVYAWGANSYGQLGTGNKSNQALPTLI---NTDKERMV 287
Query: 193 YEVTCGSFHTA 203
C + HT+
Sbjct: 288 EVAACHTSHTS 298
>gi|119578073|gb|EAW57669.1| hCG2006901, isoform CRA_f [Homo sapiens]
Length = 1319
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 844 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 900
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 901 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 949
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 950 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 1000
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 1001 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 1048
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 1049 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 1100
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 896 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 949
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 950 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 1000
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 1001 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 1051
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 1052 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 1103
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 1104 --QGKKVN---RVACGSAHTL 1119
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 97/203 (47%), Gaps = 32/203 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 17 IRDIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR 68
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 69 ---VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL- 118
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
+ ++CG + ++ +G VW+W + + G N + T N P L+
Sbjct: 119 NGQGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNR-----KPTLV- 172
Query: 305 GNGPHGPKFQDPVQVACGAAHTV 327
G + Q +VACG++H+V
Sbjct: 173 ----QGLEGQKITRVACGSSHSV 191
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 750 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 806
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 807 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 857
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 858 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 908
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 909 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 957
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 958 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 985
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 991 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGSDDHVRRPRQ 1047
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 1048 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 1099
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 1100 VAALQGKK---VNRVACGSAHT 1118
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 83/196 (42%), Gaps = 26/196 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ ++G L+ WG L + G + P V GH V++V
Sbjct: 16 RIRDIACGSSHSAALTSSGELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQV 72
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACGS L E + +SWG + G+LG G E P+ IE N V
Sbjct: 73 ACGSRDAQTLALTDEG------LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GV 123
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWT-----FGLGENGQLGHGTTQSALVPEQVKEL 247
++ CG+ + LT + WT +G ++GQ G+GTT P V+ L
Sbjct: 124 CQIECGAQFSLALTK--------SGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGL 175
Query: 248 PQYVYLVSVDCGLFHT 263
+ + V CG H+
Sbjct: 176 -EGQKITRVACGSSHS 190
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/195 (27%), Positives = 87/195 (44%), Gaps = 37/195 (18%)
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
+P++IE + ++ CGS H+A LT +T+GLGE G+LGHG
Sbjct: 5 KPRLIEALKTKR---IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNT 53
Query: 237 SALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
+ L P+ VK L + ++ V CG T ++ G V+SWG + G G ++
Sbjct: 54 TQLKPKMVKVLLGH-RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIP 112
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG----YKLWSWGRGRSGV 346
+N + NG Q Q+ CGA ++ +T G +++++WG G
Sbjct: 113 QN---------IERLNG------QGVCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQ 157
Query: 347 LGTGKTIDFFAPAIV 361
G G T P +V
Sbjct: 158 QGNGTTTVNRKPTLV 172
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 760 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 797
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 798 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 856
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 857 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 903
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 904 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 942
Score = 42.7 bits (99), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSS--TEGGFSLVSSFTPSPVWDFHGHTVVK 131
+C ++ G SLA+ +G +W W D+ +G + + P+ V G + +
Sbjct: 123 VCQIECGAQFSLALTKSGVVWTWQVYAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQKITR 182
Query: 132 VACGSEHVVA 141
VACGS H VA
Sbjct: 183 VACGSSHSVA 192
>gi|52345808|ref|NP_001004950.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
gi|49522414|gb|AAH75441.1| MGC89218 protein [Xenopus (Silurana) tropicalis]
Length = 526
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S P + G +V ++ GS HVV + S GE Y SWG N QLG G
Sbjct: 60 SILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVY--------SWGHNAYSQLGNGST 111
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P + T N + A+ V CGS H+ +LT + + +G +GQ+G
Sbjct: 112 NQALSPCQVST-NLINKKAI-SVACGSHHSMVLT--------CDGEVYAWGYNNSGQVGS 161
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++ + CG + V G+V++WG N L
Sbjct: 162 GSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNG------NGQLGLG 215
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P I+ G + + QV CG AHT+ +TD+G +++WG G LGTG
Sbjct: 216 SSGNQPTPCRIA--ALQGIRVE---QVVCGYAHTLALTDEGV-MYAWGANSYGQLGTGNK 269
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 270 SNQSYPVQVI 279
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 176/457 (38%), Gaps = 62/457 (13%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAG-GMMSLAIDNAGALWMWGNCPLPDSSTEGGF 110
L G S+ + + + + +I S+ G G + + + G ++ WG+ S G
Sbjct: 53 LGTGDAQSILEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY---SQLGNG 109
Query: 111 SLVSSFTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S + +P V + + VACGS H + L GE Y +WG NN+GQ+G
Sbjct: 110 STNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY--------AWGYNNSGQVGS 161
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G ++ P+ + + Q+ V + CG + + D E W G NGQ
Sbjct: 162 GSTANQPIPRKVTSCLQNK--TVIGIACGQMSSMAVV------DNGEVYAW--GYNGNGQ 211
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCP 285
LG G++ + P ++ L Q + + V CG HT ++ G +++WG + G G
Sbjct: 212 LGLGSSGNQPTPCRIAAL-QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKS 270
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N S D + I+ AC ++HT +++ WG+ R
Sbjct: 271 NQSYPVQVIVDKERIVEIA---------------ACHSSHTSAAKSQSGQVYMWGQCRGQ 315
Query: 346 VLGTGKTIDF---------FAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERD 396
+ T F F+ ++W L+ E D L E ++ + D
Sbjct: 316 SVITPHLTHFSCTDDVFACFSTPAIMWRLLSVE-PDDHLTVA----ESLKREFDNPNTAD 370
Query: 397 EKLSSAMEEMKLLQSKLSVM-ERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWE 455
K + + + + L + E + S+LH + + P+ F +
Sbjct: 371 LKFLVDEKYIYVHKVLLQIRCEHFRSLLHENEEEIIEMNQFSYPVY---RAFLEYLYTDN 427
Query: 456 NMLESADRSKLVRLERFYR-NMLAGVKDKLMKRRIQE 491
+ D L+ L YR N L + + +K+ I E
Sbjct: 428 ISISPEDAIGLLELATIYRENRLKQLCQQTIKQGICE 464
>gi|302876126|ref|YP_003844759.1| chromosome condensation regulator RCC1 [Clostridium cellulovorans
743B]
gi|302578983|gb|ADL52995.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 852
Score = 91.3 bits (225), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+V AG ++A+ N G +W WG N L D +T +S +P V +G +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTS------NSNSPVQVKGLNG--ITA 89
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ G H VAL S G ++WG +G+LG G R P I
Sbjct: 90 ISAGWAHFVALKSDG--------TVWTWGVGYSGELGDGTNSLRTTPAPINGLT-----G 136
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ G HT L + W++G + GQLG G T ++ +P QV P +
Sbjct: 137 ITAISAGWNHTLAL--------KADGTLWSWGQNQYGQLGTGNTTNSNIPLQV---PGQI 185
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ S+ G H+ V+ + G VWSWG G N + + N +P ISG
Sbjct: 186 GITSISSGGGHSLVIKNDGTVWSWGCNN-FGQLGNGTNSNNP-----TPHQISG------ 233
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ V+ G H+ + DG +W+WG G L G ID + P
Sbjct: 234 -LNGIINVSAGVIHSTALKSDG-TVWNWGCNFRGELANGNKIDSYIP 278
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 126/305 (41%), Gaps = 49/305 (16%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + +N +P++ I ++ AG +A+ + G +W WG +G SL
Sbjct: 67 LGDGTTSNSNSPVQVKGLNGITAISAGWAHFVALKSDGTVWTWG-VGYSGELGDGTNSLR 125
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ TP+P+ G + ++ G H +AL + G +SWG N GQLG G+
Sbjct: 126 T--TPAPINGLTG--ITAISAGWNHTLALKADG--------TLWSWGQNQYGQLGTGNTT 173
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P + ++ G H+ ++ + + W++G GQLG+G
Sbjct: 174 NSNIP-----LQVPGQIGITSISSGGGHSLVIKN--------DGTVWSWGCNNFGQLGNG 220
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T + P Q+ L +++V G+ H++ + S G VW+WG L
Sbjct: 221 TNSNNPTPHQISGLNG---IINVSAGVIHSTALKSDGTVWNWGCNF------RGELANGN 271
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D+ P + NG +G + + G + + DG W WG G LG G
Sbjct: 272 KIDSYIP--VQANGLNG-----IIAITAGWEFSSAIKSDG-TFWVWGVNDYGQLGNGSKS 323
Query: 354 DFFAP 358
D +P
Sbjct: 324 DVTSP 328
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 112/296 (37%), Gaps = 47/296 (15%)
Query: 70 APIK----ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
API I ++ AG +LA+ G LW WG G + +S P V
Sbjct: 129 APINGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQ---LGTGNTTNSNIPLQVPGQI 185
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T + G V+ D +SWG NN GQLG G + P I N
Sbjct: 186 GITSISSGGGHSLVIK----------NDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN 235
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ V+ G H+ L + W +G G+L +G + +P Q
Sbjct: 236 -----GIINVSAGVIHSTALKS--------DGTVWNWGCNFRGELANGNKIDSYIPVQAN 282
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L ++++ G +S + S G W WG+ G N S + D SP+ +S
Sbjct: 283 GLNG---IIAITAGWEFSSAIKSDGTFWVWGVND-YGQLGNGSKS-----DVTSPMQVS- 332
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ GA +TV + DG ++++G G LG G T P +V
Sbjct: 333 ------SLSGITAIDTGATYTVALKTDG-NIFAFGENTYGQLGNGTTTGSTTPELV 381
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 49 EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG 108
Q+ +G ++ + I I S+ +GG SL I N G +W WG C + G
Sbjct: 162 NQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGTVWSWG-C--NNFGQLG 218
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ ++ TP + +G ++ V+ G H AL S G ++WG N G+L
Sbjct: 219 NGTNSNNPTPHQISGLNG--IINVSAGVIHSTALKSDG--------TVWNWGCNFRGELA 268
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G++ P N + +T G F +A+ + + W +G+ +
Sbjct: 269 NGNKIDSYIPVQANGLN-----GIIAITAGWEFSSAIKS---------DGTFWVWGVNDY 314
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
GQLG+G+ P QV L + ++D G +T + + G+++++G
Sbjct: 315 GQLGNGSKSDVTSPMQVSSLSG---ITAIDTGATYTVALKTDGNIFAFG 360
Score = 39.3 bits (90), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 30/180 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I +V AG + S A+ + G +W WG C G + + S+ P +G ++ +
Sbjct: 237 IINVSAGVIHSTALKSDGTVWNWG-CNFRGELANG--NKIDSYIPVQANGLNG--IIAIT 291
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G E A+ S G + WG N+ GQLG G + P + + + +
Sbjct: 292 AGWEFSSAIKSDG--------TFWVWGVNDYGQLGNGSKSDVTSPMQVSSLS-----GIT 338
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYV 251
+ G+ +T L K ++ F GEN GQLG+GTT + PE V YV
Sbjct: 339 AIDTGATYTVAL---KTDGNI-------FAFGENTYGQLGNGTTTGSTTPELVSIGDTYV 388
>gi|91202109|emb|CAJ75169.1| hypothetical protein kuste4407 [Candidatus Kuenenia
stuttgartiensis]
Length = 1590
Score = 91.3 bits (225), Expect = 9e-16, Method: Composition-based stats.
Identities = 65/231 (28%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
K+A G+ H +AL S G ++WG N +GQLG ++R P + N
Sbjct: 566 KIAAGARHSLALKSNG--------TVWAWGNNGDGQLGDETTKNRTIPAQVSNVN----- 612
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A+ + G+ H+ L + W +G +GQLG GT P Q+ L
Sbjct: 613 AITTIDGGASHSLALKS--------DGTVWVWGANWDGQLGDGTNTRKTTPVQISGLSD- 663
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++S+ CG++H+ + S G VW++G L ++ RN+ P+ +SG
Sbjct: 664 --IISIACGMYHSIALKSDGTVWAFGRNDYGQLGDGTNVYRNK------PVQVSG----- 710
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + +A G H + + DG +W+WG SG LG G T + P V
Sbjct: 711 --LSDVIAIAGGDYHCLALKSDGI-VWAWGNNESGQLGDGTTTNRNTPVQV 758
Score = 91.3 bits (225), Expect = 1e-15, Method: Composition-based stats.
Identities = 77/285 (27%), Positives = 120/285 (42%), Gaps = 49/285 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ AG SLA+ + G +W WGN L D +T+ + P+ V + + T +
Sbjct: 567 IAAGARHSLALKSNGTVWAWGNNGDGQLGDETTK------NRTIPAQVSNVNAITTID-- 618
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +AL S G + WGAN +GQLG G + P I + +
Sbjct: 619 GGASHSLALKSDG--------TVWVWGANWDGQLGDGTNTRKTTPVQISGLSD-----II 665
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG +H+ L + W FG + GQLG GT P QV L +
Sbjct: 666 SIACGMYHSIALKS--------DGTVWAFGRNDYGQLGDGTNVYRNKPVQVSGLSD---V 714
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+++ G +H + S G VW+WG + L + RN +P+ +S
Sbjct: 715 IAIAGGDYHCLALKSDGIVWAWGNNESGQLGDGTTTNRN------TPVQVS-------SI 761
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ +A G H++ + D +W+WG SG LG G T + P
Sbjct: 762 SNVAAIARGWVHSLALKSD-ETVWAWGSNGSGQLGDGTTTNRTTP 805
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 59/226 (26%), Positives = 98/226 (43%), Gaps = 41/226 (18%)
Query: 60 LEDDSKTNHKAPIKICSVKA------GGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D++ N P ++ +V A G SLA+ + G +W+WG + L D +
Sbjct: 594 LGDETTKNRTIPAQVSNVNAITTIDGGASHSLALKSDGTVWVWGANWDGQLGDGT----- 648
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
++ +PV ++ +ACG H +AL S G +++G N+ GQLG G
Sbjct: 649 ---NTRKTTPVQISGLSDIISIACGMYHSIALKSDG--------TVWAFGRNDYGQLGDG 697
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R +P + + V + G +H L + + W +G E+GQL
Sbjct: 698 TNVYRNKPVQVSGLSD-----VIAIAGGDYHCLALKS--------DGIVWAWGNNESGQL 744
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
G GTT + P QV + + ++ G H+ + S VW+WG
Sbjct: 745 GDGTTTNRNTPVQVSSISN---VAAIARGWVHSLALKSDETVWAWG 787
Score = 67.4 bits (163), Expect = 2e-08, Method: Composition-based stats.
Identities = 79/308 (25%), Positives = 121/308 (39%), Gaps = 44/308 (14%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P++I S+ G S+A+ + G +W +G D G + V
Sbjct: 644 LGDGTNTRKTTPVQISGLSDIISIACGMYHSIALKSDGTVWAFGR---NDYGQLGDGTNV 700
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V V+ +A G H +AL S G + ++WG N +GQLG G
Sbjct: 701 YRNKPVQVSGLS--DVIAIAGGDYHCLALKSDG--------IVWAWGNNESGQLGDGTTT 750
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P + + + V + G H+ L + W +G +GQLG G
Sbjct: 751 NRNTPVQVSSISN-----VAAIARGWVHSLALKS--------DETVWAWGSNGSGQLGDG 797
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT + P + + + + +T + S G W+ G E G N +
Sbjct: 798 TTTNRTTPVNITNINNIIAIAGGG---GYTIALKSDGTGWTCG-EYGWDYSENNGSSYWG 853
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+P ++G D V VA G H V++ DG +W+WG G LG G T
Sbjct: 854 YSYRTTPDQVAG-------INDVVAVAGGWQHIVVLKQDG-TVWTWGVNWYGQLGDGTTT 905
Query: 354 DFFAPAIV 361
D P V
Sbjct: 906 DRDTPVQV 913
Score = 44.3 bits (103), Expect = 0.17, Method: Composition-based stats.
Identities = 59/244 (24%), Positives = 92/244 (37%), Gaps = 64/244 (26%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ G LA+ + G +W WGN +S G + + TP V V +A
Sbjct: 714 VIAIAGGDYHCLALKSDGIVWAWGN---NESGQLGDGTTTNRNTPVQVSSIS--NVAAIA 768
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP--------------- 178
G H +AL S D ++WG+N +GQLG G +R P
Sbjct: 769 RGWVHSLALKS--------DETVWAWGSNGSGQLGDGTTTNRTTPVNITNINNIIAIAGG 820
Query: 179 --KIIETFNQDSPWAV------YEVTCGSFHTALLTHRKRP------NDML--------- 215
I + + W Y GS + ++R P ND++
Sbjct: 821 GGYTIALKSDGTGWTCGEYGWDYSENNGSSYWGY-SYRTTPDQVAGINDVVAVAGGWQHI 879
Query: 216 -----ESMCWTFGLGENGQLGHGTTQSALVPEQVK----ELPQYVY---LVSVDCGLFHT 263
+ WT+G+ GQLG GTT P QV E+P +S++ G+ +T
Sbjct: 880 VVLKQDGTVWTWGVNWYGQLGDGTTTDRDTPVQVDINLGEMPDTFPPEGSISINSGVSYT 939
Query: 264 SVVS 267
+ S
Sbjct: 940 NSTS 943
>gi|410211612|gb|JAA03025.1| hect domain and RLD 6 [Pan troglodytes]
Length = 1020
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ TV V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLTVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N++GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSSGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|114595105|ref|XP_001160851.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Pan troglodytes]
Length = 1020
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ TV V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLTVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N++GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSSGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|41053397|ref|NP_956285.1| RCC1 and BTB domain-containing protein 1 [Danio rerio]
gi|28278439|gb|AAH45877.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Danio rerio]
gi|182890896|gb|AAI65711.1| Rcbtb1 protein [Danio rerio]
Length = 531
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ P + G ++ ++ GS V LV+ ED Y+WG N QLG G
Sbjct: 61 STIAPKKLDCLSGKKLISLSYGSGPHVLLVT-------EDGELYAWGHNGYSQLGNGTTN 113
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P ++ T Q V EV+CGS H+ LTH E + +G GQ+G G
Sbjct: 114 QGVSPILVSTNLQGKR--VTEVSCGSHHSLALTH--------EGEVFAWGYNNCGQVGSG 163
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P +V Q +V++ CG + V+ G+V+ WG N L
Sbjct: 164 STANQPTPRKVSNCLQNKVIVNIACGQTSSMAVTDNGEVYGWGYNG------NGQLGLGN 217
Query: 294 AGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ ++P LI+ G +Q+A G AH++ +TD+G L++WG G LGTG
Sbjct: 218 NGNQLTPCRLIALQGF------CVLQIASGYAHSLALTDEGL-LYAWGANTYGQLGTGNK 270
Query: 353 IDFFAPAIVL 362
+ +P V+
Sbjct: 271 SNQLSPVQVM 280
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 31/216 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTV 129
++ V G SLA+ + G ++ WG NC G S + TP V + +
Sbjct: 129 RVTEVSCGSHHSLALTHEGEVFAWGYNNC-----GQVGSGSTANQPTPRKVSNCLQNKVI 183
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDS 188
V +ACG +A+ GE Y WG N NGQLGLG+ ++L P ++I
Sbjct: 184 VNIACGQTSSMAVTDNGEV--------YGWGYNGNGQLGLGNNGNQLTPCRLIAL----Q 231
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V ++ G H+ LT E + + +G GQLG G + L P QV
Sbjct: 232 GFCVLQIASGYAHSLALTD--------EGLLYAWGANTYGQLGTGNKSNQLSPVQVMTEK 283
Query: 249 QYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKGLGL 283
+ + ++ C HTS + +G V+ WG +G +
Sbjct: 284 ERIVEIAA-CHSTHTSAAKTQSGQVYMWGQCRGQAI 318
>gi|114595107|ref|XP_001160807.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Pan troglodytes]
Length = 984
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 116/246 (47%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ TV V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLTVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSSGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 91/210 (43%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N++GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSSGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSSGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|348688463|gb|EGZ28277.1| hypothetical protein PHYSODRAFT_309181 [Phytophthora sojae]
Length = 4167
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/263 (30%), Positives = 122/263 (46%), Gaps = 46/263 (17%)
Query: 119 SPVWDFHGHTV--VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
+PV G + V A G EH++A+ S G YSWG N+ GQLGLG S+
Sbjct: 547 TPVRALSGIVINMVAAANGCEHMLAVASDG--------AVYSWGYNDRGQLGLGSTISKS 598
Query: 177 R-PKIIETFNQDSPWAVYEVTCGSF---HTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
P++I++ + Y +T + H+A+++ FG+ + GQLG
Sbjct: 599 HTPRMIDSLREK-----YHITTAAVSYHHSAVVSSNGE--------LLMFGMNDCGQLGL 645
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNAS 288
TQ P+ V L V + V CGL+HT ++S G+V+S+G + GLG N
Sbjct: 646 DHTQHQHTPQLVDSLSSQV-ITEVACGLYHTIAITSGGEVYSFGKNDYGQLGLGHARNMK 704
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ P L+ + G + V V+CG HTV +++ G KL +WGR G LG
Sbjct: 705 V----------PTLVKTS--LGESDEKIVAVSCGYYHTVTISEKG-KLITWGRNDYGQLG 751
Query: 349 TGKTIDFFAPAIVLWPPLTEEFK 371
G D A + PL+ + K
Sbjct: 752 IGSK-DHKNSAQYVPLPLSSKIK 773
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 20/193 (10%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S + + G L M+G + D G TP V + +VACG H +A+
Sbjct: 623 SAVVSSNGELLMFG---MNDCGQLGLDHTQHQHTPQLVDSLSSQVITEVACGLYHTIAIT 679
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S GE Y S+G N+ GQLGLG + P +++T +S + V+CG +HT
Sbjct: 680 SGGEVY--------SFGKNDYGQLGLGHARNMKVPTLVKTSLGESDEKIVAVSCGYYHTV 731
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ + + T+G + GQLG G+ + V LP + + CG +HT
Sbjct: 732 TISEKGK--------LITWGRNDYGQLGIGSKDHKNSAQYVP-LPLSSKIKTASCGCYHT 782
Query: 264 SVVSSAGDVWSWG 276
++ S G V +G
Sbjct: 783 LILMSNGRVMVFG 795
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 107/244 (43%), Gaps = 39/244 (15%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F + +A G+E V+A+V +D ++ G N +GQ G G E R+ II T
Sbjct: 499 FSAKAIRDIAGGNE-VLAVVM-------KDGAVFTCGLNKSGQCGNGTFEERV---IIAT 547
Query: 184 FNQDSPWAVYEVTC---GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-AL 239
+ V + G H + + +++G + GQLG G+T S +
Sbjct: 548 PVRALSGIVINMVAAANGCEHMLAVAS--------DGAVYSWGYNDRGQLGLGSTISKSH 599
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDA 297
P + L + ++ + H++VVSS G++ +GM LGL + D+
Sbjct: 600 TPRMIDSLREKYHITTAAVSYHHSAVVSSNGELLMFGMNDCGQLGLDHTQHQHTPQLVDS 659
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+S +I+ +VACG HT+ +T G +++S+G+ G LG G +
Sbjct: 660 LSSQVIT-------------EVACGLYHTIAITSGG-EVYSFGKNDYGQLGLGHARNMKV 705
Query: 358 PAIV 361
P +V
Sbjct: 706 PTLV 709
>gi|89273844|emb|CAJ81935.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Xenopus (Silurana) tropicalis]
Length = 526
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S P + G +V ++ GS HVV + S GE Y SWG N QLG G
Sbjct: 60 SIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVY--------SWGHNAYSQLGNGST 111
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P + T N + A+ V CGS H+ +LT + + +G +GQ+G
Sbjct: 112 NQALSPCQVST-NLINKKAI-SVACGSHHSMVLT--------CDGEVYAWGYNNSGQVGS 161
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++ + CG + V G+V++WG N L
Sbjct: 162 GSTANQPIPRKVTSCLQNKTVIGIACGQMSSMAVVDNGEVYAWGYNG------NGQLGLG 215
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P I+ G + + QV CG AHT+ +TD+G +++WG G LGTG
Sbjct: 216 SSGNQPTPCRIA--ALQGIRVE---QVVCGYAHTLALTDEGV-MYAWGANSYGQLGTGNK 269
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 270 SNQSYPVQVI 279
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 100/457 (21%), Positives = 175/457 (38%), Gaps = 62/457 (13%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAG-GMMSLAIDNAGALWMWGNCPLPDSSTEGGF 110
L G S+ + + + + +I S+ G G + + + G ++ WG+ S G
Sbjct: 53 LGTGDAQSIIEPRRIDMLSGKRIVSLSYGSGPHVVIVTSDGEVYSWGHNAY---SQLGNG 109
Query: 111 SLVSSFTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S + +P V + + VACGS H + L GE Y +WG NN+GQ+G
Sbjct: 110 STNQALSPCQVSTNLINKKAISVACGSHHSMVLTCDGEVY--------AWGYNNSGQVGS 161
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G ++ P+ + + Q+ V + CG + + D E W G NGQ
Sbjct: 162 GSTANQPIPRKVTSCLQNK--TVIGIACGQMSSMAVV------DNGEVYAW--GYNGNGQ 211
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCP 285
LG G++ + P ++ L Q + + V CG HT ++ G +++WG G G
Sbjct: 212 LGLGSSGNQPTPCRIAAL-QGIRVEQVVCGYAHTLALTDEGVMYAWGANSYGQLGTGNKS 270
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N S D + I+ AC ++HT +++ WG+ R
Sbjct: 271 NQSYPVQVIVDKERIVEIA---------------ACHSSHTSAAKSQSGQVYMWGQCRGQ 315
Query: 346 VLGTGKTIDF---------FAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERD 396
+ T F F+ ++W L+ E D L E ++ + D
Sbjct: 316 SVITPHLTHFSCTDDVFACFSTPAIMWRLLSVE-PDDHLTVA----ESLKREFDNPNTAD 370
Query: 397 EKLSSAMEEMKLLQSKLSVM-ERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWE 455
K + + + + L + E + S+LH + + P+ F +
Sbjct: 371 LKFLVDEKYIYVHKVLLQIRCEHFRSLLHENEEEIIEMNQFSYPVY---RAFLEYLYTDN 427
Query: 456 NMLESADRSKLVRLERFYR-NMLAGVKDKLMKRRIQE 491
+ D L+ L YR N L + + +K+ I E
Sbjct: 428 ISISPEDAIGLLELATIYRENRLKQLCQQTIKQGICE 464
>gi|356539788|ref|XP_003538375.1| PREDICTED: uncharacterized protein LOC100794953 [Glycine max]
Length = 1046
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 141/313 (45%), Gaps = 42/313 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN-CPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTV 129
+ + +V G + A+ ++G ++ WGN D EG S + P + G ++
Sbjct: 356 LHVKTVACGEYHTCALTDSGEVYTWGNDVCCADLLNEG--RTRSQWIPQRLGGPLDGISI 413
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H + S G + ++G G LG GD S PK +E+ N
Sbjct: 414 SSVACGEWHTAIVSSCGRLF--------TYGDGTFGVLGHGDLRSYSSPKEVESLN---G 462
Query: 190 WAVYEVTCGSFHTALLTH----RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V CGS+HTA + R R N + +T+G G+ G+LGH + +VP +V
Sbjct: 463 LRVRSAACGSWHTAAIVEVMFDRFRYNSASGKL-FTWGDGDEGRLGHVDNGNKIVPTRVT 521
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+L Y + V V CG T +++ G V++ G K L A D + +++ G
Sbjct: 522 QLVDYDF-VQVSCGRMLTVALTNMGKVFAMGSAK------YGQLGNPHARDKV--VIVEG 572
Query: 306 NGPHGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q+ V+V + G+ H ++T G +++WGRG G LG G T D + P V
Sbjct: 573 QLK-----QEFVKVISTGSYHVAVLTSAG-SVYTWGRGEIGQLGLGDTEDRYTPCFV--- 623
Query: 365 PLTEEFKQDELNT 377
E + ++NT
Sbjct: 624 ---EALRDRQVNT 633
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 105/252 (41%), Gaps = 44/252 (17%)
Query: 108 GGFSLVSSFTPS-PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
G +SLV S + D H +A G +H + GE + WG G+
Sbjct: 289 GIYSLVPKLLESTAMLDVHN-----IALGGKHAALVTKQGEVF--------CWGQGKWGR 335
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG PKI+++ N V V CG +HT LT D E W +
Sbjct: 336 LGQKIDMDISSPKIVDSLN---GLHVKTVACGEYHTCALT------DSGEVYTWGNDVCC 386
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
L G T+S +P+++ + + SV CG +HT++VSS G ++++G + G+ +
Sbjct: 387 ADLLNEGRTRSQWIPQRLGGPLDGISISSVACGEWHTAIVSSCGRLFTYG-DGTFGVLGH 445
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY----------KL 336
L + + + +G + + ACG+ HT + + + KL
Sbjct: 446 GDLRSYSSPKEVESL-------NGLRVRS---AACGSWHTAAIVEVMFDRFRYNSASGKL 495
Query: 337 WSWGRGRSGVLG 348
++WG G G LG
Sbjct: 496 FTWGDGDEGRLG 507
>gi|426231471|ref|XP_004009762.1| PREDICTED: E3 ISG15--protein ligase HERC5 [Ovis aries]
Length = 963
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 96/204 (47%), Gaps = 23/204 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG D G S+ TP V + G +V+++
Sbjct: 154 IIQITCGDYHSLALSKGGELFAWGQN--LDGQLGVGRIFASTSTPEIVENLSGVPLVQIS 211
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G YSWG N+ GQLGLG ++ P IE + V
Sbjct: 212 AGEAHSMALSMSGNV--------YSWGRNDCGQLGLGHTYNKDSPSCIEALDDQK---VE 260
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + +TFG G+ GQLGH +TQ+ L P V L +
Sbjct: 261 FLACGGSHTALLTK--------SGLVFTFGDGKYGQLGHNSTQNELRPCLVAGLVGN-RV 311
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWG 276
+ CG HT + VS G V+S+G
Sbjct: 312 TQIACGRQHTLAYVSDMGKVFSFG 335
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 113/239 (47%), Gaps = 34/239 (14%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQ 186
++++ CG H +AL GE ++WG N +GQLG+G S P+I+E
Sbjct: 153 NIIQITCGDYHSLALSKGGE--------LFAWGQNLDGQLGVGRIFASTSTPEIVENL-- 202
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T + P ++
Sbjct: 203 -SGVPLVQISAGEAHSMALS--------MSGNVYSWGRNDCGQLGLGHTYNKDSPSCIEA 253
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Q V ++ CG HT++++ +G V+++G K L N + + P L++G
Sbjct: 254 LDDQKVEFLA--CGGSHTALLTKSGLVFTFGDGK------YGQLGHNSTQNELRPCLVAG 305
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+ Q+ACG HT+ D K++S+G G+ G LG G T + P + P
Sbjct: 306 LVGN-----RVTQIACGRQHTLAYVSDMGKVFSFGSGKEGQLGNGGTCNQLMPRPMKLP 359
>gi|326926479|ref|XP_003209427.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Meleagris gallopavo]
Length = 4334
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGD---GDYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V ++ G +H + ++ D ++++WG G G G +
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 702
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 123/250 (49%), Gaps = 40/250 (16%)
Query: 128 TVVKVACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
T + +CGS+ H +AL +GE + SWG + G+LG G+ + + RP+ IE
Sbjct: 3555 TQLVTSCGSDGHSMALTESGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALQG 3606
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +++CG H+A++T + +TFG G+ G+LG G T + +PE+V
Sbjct: 3607 EE---VVQMSCGFKHSAVVT--------ADGKLFTFGNGDYGRLGLGNTSNKKLPERVTA 3655
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWGMEK--GLGLCPNASLTRNEAGDAISPILI 303
L Y + V CGL HT VS G VW++G LGL + + + + D + I I
Sbjct: 3656 LEGY-QIGQVACGLNHTVAVSMDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCGIGI 3714
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
+VACG +V +T DG+ ++++G+ R L G+ + P V
Sbjct: 3715 K-------------KVACGTQFSVALTKDGH-VYTFGQDRLIGLPEGRARNHNRPQQV-- 3758
Query: 364 PPLTEEFKQD 373
P L+ F +D
Sbjct: 3759 PVLSGVFIED 3768
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 128/278 (46%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 3567 SMALTESGEVFSWGD---GDYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 3623
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 3624 ADGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTV 3672
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ M SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 3673 AVS-------MDGSMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCG-IGIKKVACGTQFS 3724
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D +A GA
Sbjct: 3725 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVL------SGVFIED---IAVGA 3773
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ G +++WG G LG G T P ++
Sbjct: 3774 EHTLALSSTG-DVYAWGSNSEGQLGLGHTNHVREPTLI 3810
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 3712 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLSGVF 3765
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +A G+EH +AL S G+ Y +WG+N+ GQLGLG P +I +
Sbjct: 3766 IEDIAVGAEHTLALSSTGDVY--------AWGSNSEGQLGLGHTNHVREPTLITVLQGKN 3817
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 3818 ---IRQISAGRCHSAAWT 3832
>gi|307686853|ref|ZP_07629299.1| regulator of chromosome condensation RCC1 [Clostridium
cellulovorans 743B]
Length = 671
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 122/287 (42%), Gaps = 49/287 (17%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+V AG ++A+ N G +W WG N L D +T +S +P V +G +
Sbjct: 38 IAVSAGNTTTIALKNDGTVWSWGFNQNGHLGDGTTS------NSNSPVQVKGLNG--ITA 89
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ G H VAL S G ++WG +G+LG G R P I
Sbjct: 90 ISAGWAHFVALKSDG--------TVWTWGVGYSGELGDGTNSLRTTPAPINGLT-----G 136
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ G HT L + W++G + GQLG G T ++ +P QV P +
Sbjct: 137 ITAISAGWNHTLAL--------KADGTLWSWGQNQYGQLGTGNTTNSNIPLQV---PGQI 185
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ S+ G H+ V+ + G VWSWG G N + + N +P ISG
Sbjct: 186 GITSISSGGGHSLVIKNDGTVWSWGCNN-FGQLGNGTNSNNP-----TPHQISG------ 233
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ V+ G H+ + DG +W+WG G L G ID + P
Sbjct: 234 -LNGIINVSAGVIHSTALKSDG-TVWNWGCNFRGELANGNKIDSYIP 278
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 127/305 (41%), Gaps = 49/305 (16%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + +N +P++ I ++ AG +A+ + G +W WG +G SL
Sbjct: 67 LGDGTTSNSNSPVQVKGLNGITAISAGWAHFVALKSDGTVWTWG-VGYSGELGDGTNSLR 125
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ TP+P+ G + ++ G H +AL + G +SWG N GQLG G+
Sbjct: 126 T--TPAPINGLTG--ITAISAGWNHTLALKADG--------TLWSWGQNQYGQLGTGNTT 173
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P + + ++ G H+ ++ + + W++G GQLG+G
Sbjct: 174 NSNIPLQVP-----GQIGITSISSGGGHSLVIKN--------DGTVWSWGCNNFGQLGNG 220
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T + P Q+ L +++V G+ H++ + S G VW+WG L
Sbjct: 221 TNSNNPTPHQISGLNG---IINVSAGVIHSTALKSDGTVWNWGCNF------RGELANGN 271
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D+ P + NG +G + + G + + DG W WG G LG G
Sbjct: 272 KIDSYIP--VQANGLNG-----IIAITAGWEFSSAIKSDG-TFWVWGVNDYGQLGNGSKS 323
Query: 354 DFFAP 358
D +P
Sbjct: 324 DVTSP 328
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 112/296 (37%), Gaps = 47/296 (15%)
Query: 70 APIK----ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
API I ++ AG +LA+ G LW WG T + +S P V
Sbjct: 129 APINGLTGITAISAGWNHTLALKADGTLWSWGQNQYGQLGTG---NTTNSNIPLQVPGQI 185
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T + G V+ D +SWG NN GQLG G + P I N
Sbjct: 186 GITSISSGGGHSLVIK----------NDGTVWSWGCNNFGQLGNGTNSNNPTPHQISGLN 235
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ V+ G H+ L + W +G G+L +G + +P Q
Sbjct: 236 -----GIINVSAGVIHSTALKS--------DGTVWNWGCNFRGELANGNKIDSYIPVQAN 282
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L ++++ G +S + S G W WG+ G N S + D SP+ +S
Sbjct: 283 GLNG---IIAITAGWEFSSAIKSDGTFWVWGVND-YGQLGNGSKS-----DVTSPMQVS- 332
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ GA +TV + DG ++++G G LG G T P +V
Sbjct: 333 ------SLSGITAIDTGATYTVALKTDG-NIFAFGENTYGQLGNGTTTGSTTPELV 381
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 99/229 (43%), Gaps = 31/229 (13%)
Query: 49 EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG 108
Q+ +G ++ + I I S+ +GG SL I N G +W WG C + G
Sbjct: 162 NQYGQLGTGNTTNSNIPLQVPGQIGITSISSGGGHSLVIKNDGTVWSWG-C--NNFGQLG 218
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ ++ TP + +G ++ V+ G H AL S G ++WG N G+L
Sbjct: 219 NGTNSNNPTPHQISGLNG--IINVSAGVIHSTALKSDG--------TVWNWGCNFRGELA 268
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G++ P N + +T G F +A+ + + W +G+ +
Sbjct: 269 NGNKIDSYIPVQANGLN-----GIIAITAGWEFSSAIKS---------DGTFWVWGVNDY 314
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
GQLG+G+ P QV L + ++D G +T + + G+++++G
Sbjct: 315 GQLGNGSKSDVTSPMQVSSLSG---ITAIDTGATYTVALKTDGNIFAFG 360
Score = 39.3 bits (90), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 76/180 (42%), Gaps = 30/180 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I +V AG + S A+ + G +W WG C G + + S+ P +G ++ +
Sbjct: 237 IINVSAGVIHSTALKSDGTVWNWG-CNFRGELANG--NKIDSYIPVQANGLNG--IIAIT 291
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G E A+ S G + WG N+ GQLG G + P + + + +
Sbjct: 292 AGWEFSSAIKSDG--------TFWVWGVNDYGQLGNGSKSDVTSPMQVSSLS-----GIT 338
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYV 251
+ G+ +T L K ++ F GEN GQLG+GTT + PE V YV
Sbjct: 339 AIDTGATYTVAL---KTDGNI-------FAFGENTYGQLGNGTTTGSTTPELVSIGDTYV 388
>gi|444732065|gb|ELW72388.1| RCC1 and BTB domain-containing protein 2 [Tupaia chinensis]
Length = 527
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 131 KVACGS----EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
K+AC S HVV + GE + +WG N QLG G L P I T
Sbjct: 75 KIACLSYGSGPHVVLATTEGEVF--------TWGHNAYSQLGNGTTNHGLVPCHIST--N 124
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S V EV CGS+H+ +LT + + +G +GQ+G G+T + +P +V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 176
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q +V++ CG + V G+V+ WG N L +G+ +P +S
Sbjct: 177 CLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLGSSGNQPTPCRVS-- 228
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + Q +VACG AHT+++TD+G ++++WG G LGTG + P V+
Sbjct: 229 ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNKSNQSYPTPVV 280
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 182 --VVVNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVSAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 282
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 283 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 336 FATPAVTWRLLSVE 349
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 183 VVNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVSALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 237 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 276
>gi|386813626|ref|ZP_10100850.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403123|dbj|GAB63731.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 407
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 135/311 (43%), Gaps = 55/311 (17%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGF 110
L D + + P++ I ++ + G+ +LA+ + G +W WG L D +T
Sbjct: 140 LGDGTTKSRNKPVQVNNLKNITAIASKGLHNLALKSDGTVWTWGRNIYGQLGDGTT---- 195
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ +PV +T++ +A G H +A + D ++WG N GQLG G
Sbjct: 196 ----TDRNTPVQTRSLNTIISIAGGGYHSLA--------QKADGTIWTWGLNQYGQLGDG 243
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+R P ++ V + CG H+ +L + W +G ++GQL
Sbjct: 244 TITNRTIPVLVNGIKD-----VSMIRCGGDHSIVLKN--------NGTIWIWGFNQHGQL 290
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G +T + P + +L ++++D G H+ ++ S G VW+WG + L +++
Sbjct: 291 GDRSTDNRSTPVPMGDLKN---IMTIDGGGDHSLILKSDGTVWTWGNNENGQLGDGTTMS 347
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R +PI S + +A G H++ + DG +W+WG R+G LG G
Sbjct: 348 R------ATPIQAS-------TLSNVTAIASGEQHSIALKSDG-TIWAWGSNRNGQLGDG 393
Query: 351 KTIDFFAPAIV 361
+ P +V
Sbjct: 394 SISNRSTPVLV 404
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 131/308 (42%), Gaps = 55/308 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGF 110
L D + T+ K P+++ ++ G S+A+ + G +W WG+ L D +T+
Sbjct: 90 LGDGTNTDRKIPVQVKDLNNVTAIAGGAWHSVALTSDGTVWTWGSNWAGQLGDGTTK--- 146
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V + + +A H +AL S G ++WG N GQLG G
Sbjct: 147 ---SRNKPVQVNNL--KNITAIASKGLHNLALKSDG--------TVWTWGRNIYGQLGDG 193
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R P + N + + G +H+ L + + WT+GL + GQL
Sbjct: 194 TTTDRNTPVQTRSLN-----TIISIAGGGYHS--LAQKA------DGTIWTWGLNQYGQL 240
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT + +P V + + CG H+ V+ + G +W WG + L ++
Sbjct: 241 GDGTITNRTIPVLVNGIKDVSM---IRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTDN 297
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R+ +P+ P G ++ + + G H++++ DG +W+WG +G LG G
Sbjct: 298 RS------TPV------PMG-DLKNIMTIDGGGDHSLILKSDG-TVWTWGNNENGQLGDG 343
Query: 351 KTIDFFAP 358
T+ P
Sbjct: 344 TTMSRATP 351
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 97/234 (41%), Gaps = 38/234 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
T+++V+ GS H +AL S G +WG N +GQLG G R P ++ N
Sbjct: 59 TILQVSGGSFHSIALKSDG--------TVLTWGQNMHGQLGDGTNTDRKIPVQVKDLNN- 109
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V + G++H+ LT + WT+G GQLG GTT+S P QV L
Sbjct: 110 ----VTAIAGGAWHSVALTS--------DGTVWTWGSNWAGQLGDGTTKSRNKPVQVNNL 157
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ S H + S G VW+WG L + RN +P+
Sbjct: 158 KNITAIASKG---LHNLALKSDGTVWTWGRNIYGQLGDGTTTDRN------TPV------ 202
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +A G H++ DG +W+WG + G LG G + P +V
Sbjct: 203 -QTRSLNTIISIAGGGYHSLAQKADG-TIWTWGLNQYGQLGDGTITNRTIPVLV 254
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 81/195 (41%), Gaps = 38/195 (19%)
Query: 60 LEDDSKTNHKAPIKICSVK------AGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D + TN P+ + +K GG S+ + N G +W+WG + L D ST+
Sbjct: 240 LGDGTITNRTIPVLVNGIKDVSMIRCGGDHSIVLKNNGTIWIWGFNQHGQLGDRSTD--- 296
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ TP P+ D ++ + G +H + L S G ++WG N NGQLG G
Sbjct: 297 ---NRSTPVPMGDLK--NIMTIDGGGDHSLILKSDG--------TVWTWGNNENGQLGDG 343
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
SR P T + V + G H+ L + W +G NGQL
Sbjct: 344 TTMSRATPIQASTLSN-----VTAIASGEQHSIALKS--------DGTIWAWGSNRNGQL 390
Query: 231 GHGTTQSALVPEQVK 245
G G+ + P VK
Sbjct: 391 GDGSISNRSTPVLVK 405
>gi|312792299|ref|YP_004025222.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312179439|gb|ADQ39609.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 754
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/362 (25%), Positives = 138/362 (38%), Gaps = 73/362 (20%)
Query: 32 DGQLGF--SGSNSLVPCVIE---QFLTIGAPDSLE---------------------DDSK 65
DGQLG +G S+VP ++ + I A D D S
Sbjct: 123 DGQLGNRDAGEYSIVPVQVKGLKDVVAIAAGDGYSLGLKKDGTVWCWGLNESIQVIDGSN 182
Query: 66 TNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS 119
+ P +I ++ AG SLA+ G +WMW + E ++P
Sbjct: 183 KDFSVPFQIKGLKDVVAIAAGKDYSLALKKDGTVWMW---EYKYNYYEQLRRGADEYSPV 239
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
PV VV +A G H +AL +D ++WG N GQLG G E P
Sbjct: 240 PVQVEGLKDVVAIAAGRYHSLAL--------KKDGTVWAWGNNYYGQLGNGKSEDSYDPV 291
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
++ V + G H+ L + W +G E GQLG+ ++
Sbjct: 292 QVKNLKD-----VVAIAAGENHSLALKK--------DGTIWAWGDNEWGQLGNSISEKLC 338
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
VP Q K L +V++ G H+ + G VWSWG L + D+
Sbjct: 339 VPVQFKSLKD---VVAIAAGCEHSLALKKDGTVWSWGNNY------YGQLGNGNSIDSYV 389
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+ + G +D V +A G AH++ + DG +W+WG G LG G F P
Sbjct: 390 PVQVRG-------LKDVVAIATGNAHSLALKKDG-TVWAWGNNEFGQLGNGTNKSSFVPV 441
Query: 360 IV 361
V
Sbjct: 442 QV 443
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 118/285 (41%), Gaps = 58/285 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ AG SLA+ G +W WG+ +S PV VV +A
Sbjct: 299 VVAIAAGENHSLALKKDGTIWAWGDNEWGQLGNS-----ISEKLCVPVQFKSLKDVVAIA 353
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G EH +AL +D +SWG N GQLG G+ P + V
Sbjct: 354 AGCEHSLAL--------KKDGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD-----VV 400
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G+ H+ L + W +G E GQLG+GT +S+ VP QVK L +
Sbjct: 401 AIATGNAHSLALKK--------DGTVWAWGNNEFGQLGNGTNKSSFVPVQVKGLKD---V 449
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V++ G H+ G VW+WG NE G L +G+G +G +
Sbjct: 450 VAIAAGSDHSLAFKKDGTVWAWG--------------NNEFGQ-----LGNGSGGYGQYY 490
Query: 314 QDPVQ---------VACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
PVQ VA G+ H++ + DG +W+WG G+LG
Sbjct: 491 AVPVQVKGLKDVVAVAAGSVHSLALKKDG-TIWAWGSNYHGLLGN 534
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 118/282 (41%), Gaps = 53/282 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ ++ AG SLA+ G +W WGN L + +E S+ P V + VV
Sbjct: 249 VVAIAAGRYHSLALKKDGTVWAWGNNYYGQLGNGKSE------DSYDPVQVKNLK--DVV 300
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A G H +AL +D ++WG N GQLG E P ++
Sbjct: 301 AIAAGENHSLAL--------KKDGTIWAWGDNEWGQLGNSISEKLCVPVQFKSLKD---- 348
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + G H+ L + W++G GQLG+G + + VP QV+ L
Sbjct: 349 -VVAIAAGCEHSLALKK--------DGTVWSWGNNYYGQLGNGNSIDSYVPVQVRGLKD- 398
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGP 308
+V++ G H+ + G VW+WG + LG N S + P+ + G
Sbjct: 399 --VVAIATGNAHSLALKKDGTVWAWGNNEFGQLGNGTNKS--------SFVPVQVKG--- 445
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+D V +A G+ H++ DG +W+WG G LG G
Sbjct: 446 ----LKDVVAIAAGSDHSLAFKKDG-TVWAWGNNEFGQLGNG 482
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/330 (26%), Positives = 132/330 (40%), Gaps = 54/330 (16%)
Query: 23 CYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGM 82
C SL DG + G+N + +G +S++ + + ++ G
Sbjct: 356 CEHSLALKKDGTVWSWGNN--------YYGQLGNGNSIDSYVPVQVRGLKDVVAIATGNA 407
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
SLA+ G +W WGN G + SSF P V VV +A GS+H +A
Sbjct: 408 HSLALKKDGTVWAWGNNEF---GQLGNGTNKSSFVPVQVKGLK--DVVAIAAGSDHSLAF 462
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFNQDSPWAVYEVTCGS 199
+D ++WG N GQLG G + P ++ V V GS
Sbjct: 463 --------KKDGTVWAWGNNEFGQLGNGSGGYGQYYAVPVQVKGLKD-----VVAVAAGS 509
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
H+ L + W +G +G LG+ +S VP QVK L +V++ G
Sbjct: 510 VHSLALKK--------DGTIWAWGSNYHGLLGNDIERS-FVPVQVKGLKD---VVAIAAG 557
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
H+ V+ G VW+WG L N+ L + P+ I G +D V +
Sbjct: 558 SNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSV-----PVQIKG-------LKDVVAI 605
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
A G H++ + DG +W+WG G LG
Sbjct: 606 AAGEHHSLGLKKDG-TVWAWGDNFFGQLGN 634
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 81/304 (26%), Positives = 123/304 (40%), Gaps = 46/304 (15%)
Query: 61 EDDSKTN--HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP 118
E DS+T K I + AG SLA+ G +W WG TE SS P
Sbjct: 33 ESDSETTLLSKLENNIIQIAAGNYHSLALKGDGTVWAWGWNHWGQCGTE-----ESSIIP 87
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLR 177
V VV +A G H + L +D ++WG+N +GQLG D E +
Sbjct: 88 VKVKGL--KDVVAIAAGRYHSLTL--------KKDGTVWAWGSNKDGQLGNRDAGEYSIV 137
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P ++ V + G ++ L + W +GL E+ Q+ G+ +
Sbjct: 138 PVQVKGLKD-----VVAIAAGDGYSLGLKK--------DGTVWCWGLNESIQVIDGSNKD 184
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
VP Q+K L +V++ G ++ + G VW W + N D
Sbjct: 185 FSVPFQIKGLKD---VVAIAAGKDYSLALKKDGTVWMWEYKY------NYYEQLRRGADE 235
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
SP+ + G +D V +A G H++ + DG +W+WG G LG GK+ D +
Sbjct: 236 YSPVPVQVEG-----LKDVVAIAAGRYHSLALKKDG-TVWAWGNNYYGQLGNGKSEDSYD 289
Query: 358 PAIV 361
P V
Sbjct: 290 PVQV 293
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 77/322 (23%), Positives = 126/322 (39%), Gaps = 76/322 (23%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPD-SSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ ++ AG SLA G +W WGN + GG+ + PV VV V
Sbjct: 449 VVAIAAGSDHSLAFKKDGTVWAWGNNEFGQLGNGSGGYG---QYYAVPVQVKGLKDVVAV 505
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A GS H +AL +D ++WG+N +G LG D E P ++ V
Sbjct: 506 AAGSVHSLAL--------KKDGTIWAWGSNYHGLLG-NDIERSFVPVQVKGLKD-----V 551
Query: 193 YEVTCGSFHTALL-----------------------------THRKRPNDML-------- 215
+ GS H+ +L K D++
Sbjct: 552 VAIAAGSNHSLVLKKDGTVWAWGEVWFDLLNENSRLVYSSVPVQIKGLKDVVAIAAGEHH 611
Query: 216 ------ESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ W +G GQLG+ + +LVP QVK L ++++ G +H+ +
Sbjct: 612 SLGLKKDGTVWAWGDNFFGQLGNSPREKYSLVPVQVKGLKD---ILAIATGEWHSLAIKK 668
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G VW+WG E G N + +++ + P+ + G +D + ++ G+ H++
Sbjct: 669 DGTVWAWG-ENSTGQLGNETSGKDKY--SYVPVQVKG-------IKDVLAISAGSYHSLA 718
Query: 329 VTDDGYKLWSWGRGRSGVLGTG 350
+ DG +W WG G LG G
Sbjct: 719 LKKDG-TVWGWGANARGQLGNG 739
>gi|440898458|gb|ELR49953.1| RCC1 and BTB domain-containing protein 2, partial [Bos grunniens
mutus]
Length = 544
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 78 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 129
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 130 NAGLVPYHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 179
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V + G+V+ WG N L
Sbjct: 180 GSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNG------NGQLGLG 233
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 234 SSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 287
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 288 SNQSYPTPVV 297
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q
Sbjct: 147 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQSK 198
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + E W G NGQLG G++ + P +V L
Sbjct: 199 --VVVNIACGQMCSMAVVNTG------EVFVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 247
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 248 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 299
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S L T
Sbjct: 300 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 352
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 353 FATPAVTWRLLSVE 366
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ N G +++WG + G L SS TP V G V
Sbjct: 200 VVNIACGQMCSMAVVNTGEVFVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 253
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 254 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 293
>gi|168050967|ref|XP_001777928.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670688|gb|EDQ57252.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 134/287 (46%), Gaps = 43/287 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFTPSPVWDFHGHTVV 130
+ + G ++A+ GAL WG D + GF ++V P V
Sbjct: 89 VTHIACGFKHTVAVTETGALASWGG----DEYGQLGFDSGNIVDGVQPRIVKGSRDLHFS 144
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VA G H +AL +G+ Y S+G ++G LG G+ + P ++++ W
Sbjct: 145 RVAAGGYHTLALTGSGDVY--------SFGDGSSGALGHGNLDGCSTPSLVKSL-----W 191
Query: 191 A--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V ++ CG H+A LT ++ +T+G G+ GQLGHG+TQ+ +P VK L
Sbjct: 192 GLGVTQIACGENHSAALT--------VDGKVFTWGRGKYGQLGHGSTQNIKLPVAVKALV 243
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ ++ + CG HT ++S G ++SWG GL E D +SP +
Sbjct: 244 DH-DVIQIACGGDHTLAITSDGRLFSWGH----GLWGQTGHGTKE--DVLSPKQV----- 291
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
H + + VQV+ GA HTV++ D G +++ WG LGT DF
Sbjct: 292 HQLEGRVLVQVSAGARHTVVLLDRG-EVYGWGDCEQRQLGTCDRCDF 337
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 113/250 (45%), Gaps = 42/250 (16%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL--GDRESR 175
P V H V +ACG +H VA+ G SWG + GQLG G+
Sbjct: 78 PIRVAALDTHMVTHIACGFKHTVAVTETG--------ALASWGGDEYGQLGFDSGNIVDG 129
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
++P+I++ ++D ++ V G +HT LT D+ ++FG G +G LGHG
Sbjct: 130 VQPRIVKG-SRDLHFS--RVAAGGYHTLALT---GSGDV-----YSFGDGSSGALGHGNL 178
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTR 291
P VK L + + + CG H++ ++ G V++WG K G G N L
Sbjct: 179 DGCSTPSLVKSLWG-LGVTQIACGENHSAALTVDGKVFTWGRGKYGQLGHGSTQNIKL-- 235
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P+ + H D +Q+ACG HT+ +T DG +L+SWG G G G G
Sbjct: 236 --------PVAVKALVDH-----DVIQIACGGDHTLAITSDG-RLFSWGHGLWGQTGHGT 281
Query: 352 TIDFFAPAIV 361
D +P V
Sbjct: 282 KEDVLSPKQV 291
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 106/254 (41%), Gaps = 48/254 (18%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
TP+ + G +V +A H L GE Y + G+N+ GQLG+ E ++
Sbjct: 25 TPTSLSTLVGKDIVHIAASDYHTAFLTDEGEVY--------TTGSNDAGQLGVRGMEEQV 76
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGT 234
P + + V + CG HT +T ++G E GQLG G
Sbjct: 77 VPIRVAALDTH---MVTHIACGFKHTVAVTE--------TGALASWGGDEYGQLGFDSGN 125
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-------MEKGLGLCPNA 287
+ P VK + ++ V G +HT ++ +GDV+S+G L C
Sbjct: 126 IVDGVQPRIVKG-SRDLHFSRVAAGGYHTLALTGSGDVYSFGDGSSGALGHGNLDGCSTP 184
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
SL ++ G ++ Q+ACG H+ +T DG K+++WGRG+ G L
Sbjct: 185 SLVKSLWGLGVT------------------QIACGENHSAALTVDG-KVFTWGRGKYGQL 225
Query: 348 GTGKTIDFFAPAIV 361
G G T + P V
Sbjct: 226 GHGSTQNIKLPVAV 239
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 24/212 (11%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
+ Y+ G + GQLG+GD P + T + + +HTA LT
Sbjct: 2 VAVYALGRGDLGQLGIGDYSDHPTPTSLSTLVGKD---IVHIAASDYHTAFLTD------ 52
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
E +T G + GQLG + +VP +V L ++ + + CG HT V+ G +
Sbjct: 53 --EGEVYTTGSNDAGQLGVRGMEEQVVPIRVAALDTHM-VTHIACGFKHTVAVTETGALA 109
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
SWG ++ D + P ++ G+ + +VA G HT+ +T G
Sbjct: 110 SWGGDE----YGQLGFDSGNIVDGVQPRIVKGS-----RDLHFSRVAAGGYHTLALTGSG 160
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV--LW 363
++S+G G SG LG G P++V LW
Sbjct: 161 -DVYSFGDGSSGALGHGNLDGCSTPSLVKSLW 191
>gi|440800739|gb|ELR21774.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 292
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 111/244 (45%), Gaps = 43/244 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV V+CG EH A +WG G+LG GD SR +P + E
Sbjct: 68 VVGVSCGDEHSAVFTEANTVL--------TWGNGTGGRLGTGDEISRTQPVLPEH----- 114
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +++CGS TA+LT L +TFG+G G+LGHG + LVP+ V+EL
Sbjct: 115 --KVAQISCGSDWTAVLT--------LAGKVFTFGVGSYGKLGHGNDSNQLVPKLVEELD 164
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NG 307
+VS+ CG H + ++ GDV++WG N L D+ P+L+ G NG
Sbjct: 165 TE-RVVSLSCGADHMAALNIEGDVFTWGCGG------NGRLGHGSERDSKKPVLVKGMNG 217
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
+ V CG H + T DG +L+ WG G G G ++ L P L
Sbjct: 218 ------LVALTVECGGYHMGVTTLDG-ELYMWGWNVYGQCGLGLHVEN-----QLTPVLV 265
Query: 368 EEFK 371
E+ +
Sbjct: 266 EQLR 269
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 118/264 (44%), Gaps = 45/264 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G S A + WGN T S P H V ++
Sbjct: 67 KVVGVSCGDEHSAVFTEANTVLTWGNGTGGRLGTGDEISRTQPVLPE-------HKVAQI 119
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CGS+ L AG+ +++G + G+LG G+ ++L PK++E + + V
Sbjct: 120 SCGSDWTAVLTLAGKV--------FTFGVGSYGKLGHGNDSNQLVPKLVEELDTER---V 168
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++CG+ H A L +E +T+G G NG+LGHG+ + + P VK + V
Sbjct: 169 VSLSCGADHMAALN--------IEGDVFTWGCGGNGRLGHGSERDSKKPVLVKGMNGLVA 220
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
L +V+CG +H V + G+++ WG + GLGL LT P+L+
Sbjct: 221 L-TVECGGYHMGVTTLDGELYMWGWNVYGQCGLGLHVENQLT---------PVLV----- 265
Query: 309 HGPKFQDPVQVACGAAHTVLVTDD 332
+ + + VACG +HT+ + +
Sbjct: 266 EQLRGKRVLMVACGESHTMALVSN 289
>gi|300794901|ref|NP_001179920.1| RCC1 and BTB domain-containing protein 2 [Bos taurus]
gi|296481887|tpg|DAA24002.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 2 [Bos taurus]
Length = 527
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 118/250 (47%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 113 NAGLVPYHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V + G+V+ WG N L
Sbjct: 163 GSTANQPIPRRVTGCLQSKVVVNIACGQMCSMAVVNTGEVFVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 SSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 270
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 271 SNQSYPTPVV 280
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q
Sbjct: 130 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQSK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + E W G NGQLG G++ + P +V L
Sbjct: 182 --VVVNIACGQMCSMAVVNTG------EVFVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 282
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S L T
Sbjct: 283 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 335
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 336 FATPAVTWRLLSVE 349
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ N G +++WG + G L SS TP V G V
Sbjct: 183 VVNIACGQMCSMAVVNTGEVFVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 237 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 276
>gi|417407155|gb|JAA50202.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4853
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4086 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4142
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4143 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4191
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ S+ W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4192 AVSADG-------SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4243
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4244 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4292
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4293 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4329
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4231 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4284
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4285 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4336
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4337 ---IRQISAGRCHSAAWT 4351
>gi|327286813|ref|XP_003228124.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1-like [Anolis carolinensis]
Length = 4963
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 128/286 (44%), Gaps = 38/286 (13%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 456 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 512
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 513 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 564
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 565 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 612
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 613 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 664
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V ++ G +H + ++ D ++++WG G G G +
Sbjct: 665 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNS 704
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/280 (23%), Positives = 126/280 (45%), Gaps = 38/280 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4185 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4241
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ +++G + G+LGLG+ ++ P+ + + + EV CG HT
Sbjct: 4242 ADGK--------LFTFGNGDYGRLGLGNTSNKKLPERVAALEG---YQIGEVACGLNHTL 4290
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4291 VVSTDG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCG-IGIKKVACGTQFS 4342
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD--AISPILISGNGPHGPKFQDPVQVAC 321
++ G V+++G ++ +GL + N A+S + + +A
Sbjct: 4343 VALTKDGHVYTFGQDRLIGLPEGRARNHNRPQQVPALSGVFVE-------------DIAV 4389
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
GA HT+ ++ G +++WG G LG G T P +V
Sbjct: 4390 GAEHTLALSASG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4428
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 430 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 481
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 482 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 541
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 542 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 588
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 589 GGGDNGKLGHGDTNRVYKPKVI 610
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4330 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPALSGVF 4383
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +A G+EH +AL ++G+ Y +WG+N+ GQLGLG P ++ + S
Sbjct: 4384 VEDIAVGAEHTLALSASGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTSLQGKS 4435
Query: 189 PWAVYEVTCGSFHTA 203
V +++ G H+A
Sbjct: 4436 ---VRQISAGRCHSA 4447
>gi|417407153|gb|JAA50201.1| Putative e3 ubiquitin-protein ligase herc1 [Desmodus rotundus]
Length = 4846
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4079 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4135
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4136 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4184
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ S+ W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4185 AVSADG-------SVVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4236
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4237 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4285
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4286 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4322
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4224 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4277
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4278 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4329
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4330 ---IRQISAGRCHSAAWT 4344
>gi|310819121|ref|YP_003951479.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
gi|309392193|gb|ADO69652.1| regulator of chromosome condensation-like protein [Stigmatella
aurantiaca DW4/3-1]
Length = 732
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 124/306 (40%), Gaps = 49/306 (16%)
Query: 62 DDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
D S AP+++ +V AG +LA+ + G +W WG G + +
Sbjct: 366 DGSAKTSTAPVQVTALSGGFTVAAGKAHALAVRSDGTVWAWGQNLFGQ---LGDGTRMQR 422
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G V VA G +H + L D ++WG N +GQLG G R
Sbjct: 423 TAPVQVTGLSGG--VAVAAGDDHSLGLC--------LDGTVWAWGQNTSGQLGDGTTAQR 472
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P + + V V G+ H+ ++ + W +G +GQLG GTT
Sbjct: 473 PAPVQVTELS-----GVVAVAAGTSHSLAVSS--------DGTVWAWGSNASGQLGDGTT 519
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
++ L P QV L +V+V G FH+ V S G VW+WG L + R
Sbjct: 520 RARLTPVQVAGLSG---VVAVAAGYFHSLAVRSDGTVWAWGNNSFFQLGDGTNTQRP--- 573
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+P+ + P V A G H++++ DG +W WG G LG G
Sbjct: 574 ---TPVRV-------PGLSGGVAAAAGYFHSLVLRSDG-TVWGWGNNAYGQLGNGTANAS 622
Query: 356 FAPAIV 361
F+P V
Sbjct: 623 FSPVQV 628
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 90/316 (28%), Positives = 128/316 (40%), Gaps = 65/316 (20%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D + P+++ +V AG SL + + G +W WG + L D +T
Sbjct: 114 LGDGTTFRRTRPVQVTGLSEAEAVAAGDGHSLVVRSDGTVWAWGWNSDGQLGDGTTR--- 170
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
P V G VKVA G H +A+ D ++WG N++GQLG G
Sbjct: 171 ---ERHVPVQVAGLSGG--VKVAAGDGHSLAVC--------LDGTVWAWGRNDSGQLGDG 217
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R P + + V V GS H+ L R + W +G +GQL
Sbjct: 218 TTVQRSAPVQVAGLS-----GVVAVAAGSSHS--LAVRS------DGTVWAWGRNSDGQL 264
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GTT + L P QV L V+V G+FH+ V S G VW+WG T
Sbjct: 265 GDGTTSARLTPVQVTGLSGG---VAVAAGMFHSLAVRSDGTVWAWGQN-----------T 310
Query: 291 RNEAGD-----AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
R + GD +++P+ G + VA G H+++ DG +W+WG G
Sbjct: 311 RGQLGDGSMTASLTPVQAIG-------LSEGEAVAAGETHSLVARSDG-TVWAWGNNIEG 362
Query: 346 VLGTGKTIDFFAPAIV 361
G G AP V
Sbjct: 363 QRGDGSAKTSTAPVQV 378
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 134/322 (41%), Gaps = 58/322 (18%)
Query: 43 LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGN---C 99
++ + +L +G ++ D+ K+ + AGG SLAI G +W G+
Sbjct: 12 MLGIALGLWLALGWAEAGADEGKSR---------LAAGGSHSLAIRPDGTVWAAGSNTSG 62
Query: 100 PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSW 159
L D +T P+ V V VA GS H +A+ S D ++W
Sbjct: 63 QLGDGTTS------ERRVPAQVVGLS--DAVLVAAGSSHSLAIRS--------DGTAWAW 106
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G N +G+LG G R RP + ++ V G H+ ++ +
Sbjct: 107 GHNGSGELGDGTTFRRTRPVQVTGLSE-----AEAVAAGDGHSLVVRS--------DGTV 153
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W +G +GQLG GTT+ VP QV L V + + D H+ V G VW+WG
Sbjct: 154 WAWGWNSDGQLGDGTTRERHVPVQVAGLSGGVKVAAGDG---HSLAVCLDGTVWAWGRND 210
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L ++ R+ +P+ ++G V VA G++H++ V DG +W+W
Sbjct: 211 SGQLGDGTTVQRS------APVQVAG-------LSGVVAVAAGSSHSLAVRSDG-TVWAW 256
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
GR G LG G T P V
Sbjct: 257 GRNSDGQLGDGTTSARLTPVQV 278
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/287 (29%), Positives = 115/287 (40%), Gaps = 49/287 (17%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S T P++ +V AG SL + G +W WGN G S
Sbjct: 314 LGDGSMTASLTPVQAIGLSEGEAVAAGETHSLVARSDGTVWAWGNNI---EGQRGDGSAK 370
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+S P V G VA G H +A+ S D ++WG N GQLG G R
Sbjct: 371 TSTAPVQVTALSGG--FTVAAGKAHALAVRS--------DGTVWAWGQNLFGQLGDGTRM 420
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P + + V G H+ L L+ W +G +GQLG G
Sbjct: 421 QRTAPVQVTGLSGG-----VAVAAGDDHSLGL--------CLDGTVWAWGQNTSGQLGDG 467
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT P QV EL +V+V G H+ VSS G VW+WG L + R
Sbjct: 468 TTAQRPAPVQVTELSG---VVAVAAGTSHSLAVSSDGTVWAWGSNASGQLGDGTTRAR-- 522
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
++P+ ++G V VA G H++ V DG +W+WG
Sbjct: 523 ----LTPVQVAG-------LSGVVAVAAGYFHSLAVRSDG-TVWAWG 557
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 133/332 (40%), Gaps = 57/332 (17%)
Query: 41 NSLVPCVIEQFLTIGAPDS--LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGA 92
+SL C+ G DS L D + AP+++ +V AG SLA+ + G
Sbjct: 193 HSLAVCLDGTVWAWGRNDSGQLGDGTTVQRSAPVQVAGLSGVVAVAAGSSHSLAVRSDGT 252
Query: 93 LWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
+W WG + L D +T + TP V G V VA G H +A+ S
Sbjct: 253 VWAWGRNSDGQLGDGTTS------ARLTPVQVTGLSGG--VAVAAGMFHSLAVRS----- 299
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
D ++WG N GQLG G + L P ++ V G H+ L R
Sbjct: 300 ---DGTVWAWGQNTRGQLGDGSMTASLTPVQAIGLSEGEA-----VAAGETHS--LVARS 349
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ W +G GQ G G+ +++ P QV L +V G H V S
Sbjct: 350 ------DGTVWAWGNNIEGQRGDGSAKTSTAPVQVTALSGGF---TVAAGKAHALAVRSD 400
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G VW+WG L + R +P+ ++G V VA G H++ +
Sbjct: 401 GTVWAWGQNLFGQLGDGTRMQRT------APVQVTG-------LSGGVAVAAGDDHSLGL 447
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG +W+WG+ SG LG G T AP V
Sbjct: 448 CLDG-TVWAWGQNTSGQLGDGTTAQRPAPVQV 478
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 125/311 (40%), Gaps = 55/311 (17%)
Query: 60 LEDDSKTNHKAPIKICSVKAGGMMSLAIDNA------GALWMWG---NCPLPDSSTEGGF 110
L D ++ AP+++ + G ++ D++ G +W WG + L D +T
Sbjct: 414 LGDGTRMQRTAPVQVTGLSGGVAVAAGDDHSLGLCLDGTVWAWGQNTSGQLGDGTT---- 469
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+ P+PV VV VA G+ H +A+ S D ++WG+N +GQLG G
Sbjct: 470 ----AQRPAPVQVTELSGVVAVAAGTSHSLAVSS--------DGTVWAWGSNASGQLGDG 517
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+RL P + + V V G FH+ L R + W +G QL
Sbjct: 518 TTRARLTPVQVAGLS-----GVVAVAAGYFHS--LAVRS------DGTVWAWGNNSFFQL 564
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT P +V P V+ G FH+ V+ S G VW WG L
Sbjct: 565 GDGTNTQRPTPVRV---PGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNA------YGQLG 615
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A + SP+ ++G V VA G ++ V DG + +WG G LG G
Sbjct: 616 NGTANASFSPVQVTG-------LSGGVAVAAGDFQSLAVRSDG-TVRAWGDNIYGQLGDG 667
Query: 351 KTIDFFAPAIV 361
AP V
Sbjct: 668 TVTTRLAPVGV 678
Score = 42.7 bits (99), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 74/194 (38%), Gaps = 33/194 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P+++ + AG SL + + G +W WGN G +
Sbjct: 564 LGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVLRSDGTVWGWGNNAYGQ---LGNGTAN 620
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+SF+P V G V VA G +A+ S D +WG N GQLG G
Sbjct: 621 ASFSPVQVTGLSGG--VAVAAGDFQSLAVRS--------DGTVRAWGDNIYGQLGDGTVT 670
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+RL P + + A + H+ + H +G +GQLGHG
Sbjct: 671 TRLAPVGVNGLSGGMAVAAGNGFSLAVHSGGMLH-------------AWGYNTDGQLGHG 717
Query: 234 TTQSALVPEQVKEL 247
S V V+ L
Sbjct: 718 -GPSVYVTAAVRSL 730
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 87/232 (37%), Gaps = 45/232 (19%)
Query: 56 APDSLEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
A L D + P+++ +V AG SLA+ + G +W WGN
Sbjct: 510 ASGQLGDGTTRARLTPVQVAGLSGVVAVAAGYFHSLAVRSDGTVWAWGNNSF-------- 561
Query: 110 FSL---VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
F L ++ P+PV V A G H + L S D + WG N GQ
Sbjct: 562 FQLGDGTNTQRPTPVRVPGLSGGVAAAAGYFHSLVLRS--------DGTVWGWGNNAYGQ 613
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG G + P + + V G F + + R + + + G+
Sbjct: 614 LGNGTANASFSPVQVTGLSGG-----VAVAAGDFQSLAV----RSDGTVRAW------GD 658
Query: 227 N--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
N GQLG GT + L P V L ++V G + V S G + +WG
Sbjct: 659 NIYGQLGDGTVTTRLAPVGVNGLSGG---MAVAAGNGFSLAVHSGGMLHAWG 707
>gi|224061683|ref|XP_002192615.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1 [Taeniopygia
guttata]
Length = 4864
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 184/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDIIN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GGLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VGGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +E Y ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLEHYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSSVPDEIQEVVIETL 846
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4097 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4153
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4154 ADGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTV 4202
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4203 AVSTDG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDILCG-IGIKKVACGTQFS 4254
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D +A GA
Sbjct: 4255 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPLLA------GVFIED---IAVGA 4303
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ ++ G +++WG G LG G T P +V
Sbjct: 4304 EHTLALSSTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4340
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG E
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWG-EG 538
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G + + I+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 539 DFGRLGHGDSNSRNIPTLVKDIINVG------------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 95/213 (44%), Gaps = 24/213 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ + G S + G L+ +GN D G + + P V G+ + +V
Sbjct: 4138 EVVQMSCGFKHSAVVTADGKLFTFGNG---DYGRLGLGNTSNKKLPERVTALEGYQIGQV 4194
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H VA+ + G + +++G + G+LGLG+ ++ P+ ++ +
Sbjct: 4195 ACGLNHTVAVSTDGS-------MVWAFGDGDYGKLGLGNSTAKSSPQKVDIL---CGIGI 4244
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V CG+ + LT + +TFG L G ++ P+QV L V+
Sbjct: 4245 KKVACGTQFSVALTK--------DGHVYTFGQDRLIGLPEGRARNHNRPQQVPLLAG-VF 4295
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGL 283
+ + G HT +SS GDV++WG E LGL
Sbjct: 4296 IEDIAVGAEHTLALSSTGDVYAWGSNSEGQLGL 4328
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4242 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPLLAGVF 4295
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +A G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4296 IEDIAVGAEHTLALSSTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4347
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4348 ---VRQISAGRCHSAAWT 4362
>gi|344281808|ref|XP_003412669.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Loxodonta
africana]
Length = 551
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 112/240 (46%), Gaps = 33/240 (13%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCYIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V AG+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKAVVNIACGQMCSMAVVDAGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+G+ +P ++ G H + VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAALQGIHVQR------VACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 293
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/300 (27%), Positives = 125/300 (41%), Gaps = 65/300 (21%)
Query: 91 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ WG+ L + +T G LV + + + V++VACGS H + L S GE
Sbjct: 118 GEVFTWGHNAYSQLGNGTTNHG--LVPCYIST---NLSNKQVIEVACGSYHSLVLTSDGE 172
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+ +WG NN+GQ+G G ++ P+ + Q+ AV + CG + +
Sbjct: 173 VF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK--AVVNIACGQMCSMAVV- 221
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
D E W G NGQLG G++ + P +V L Q +++ V CG HT V++
Sbjct: 222 -----DAGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL-QGIHVQRVACGYAHTLVLT 273
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV-------- 319
G V++WG N G L +GN + + P+ V
Sbjct: 274 DEGQVYAWGA--------------NSYGQ-----LGTGNKSN-QSYPTPISVEKDRIIEI 313
Query: 320 -ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEE 369
AC + HT G ++ WG RG+S L T FA V W L+ E
Sbjct: 314 AACHSTHTSAAKTQGGNVYMWGQCRGQSVTLPHLTRFSCTDDVFACFATPAVTWRLLSVE 373
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ +AG +++WG + G L SS TP V G V
Sbjct: 207 VVNIACGQMCSMAVVDAGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIHVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P I +
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPISV---EKDR 309
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 310 IIEIAACHSTHTS 322
>gi|242066354|ref|XP_002454466.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
gi|241934297|gb|EES07442.1| hypothetical protein SORBIDRAFT_04g031600 [Sorghum bicolor]
Length = 1003
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/319 (27%), Positives = 145/319 (45%), Gaps = 52/319 (16%)
Query: 58 DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VS 114
DS+ D + A + ++ G + A+ +G L+ WG EG SL +
Sbjct: 270 DSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWG---------EGIHSLGFGKN 320
Query: 115 SFTPSPVWDFH-------GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
SP W H G +V+K+ACG H + S G+ Y++G G L
Sbjct: 321 QCQRSP-WFPHKLISTSDGISVLKIACGQWHTAIISSLGK--------LYTYGYGTFGVL 371
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC-----WTF 222
G GD S + PK +E+ V CG +HTA + + L+S +T+
Sbjct: 372 GHGDTHSVVHPKEVESLRGSR---AKSVACGPWHTAAIVE---TSGTLKSSAPGGKLFTW 425
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
G G+LGH +S LVP +V+ L + V CG+ T+V++ G V++ G ++
Sbjct: 426 GDAGGGKLGHTNKKSKLVPTRVESLIDCDF-TQVSCGMSLTAVLTITGVVFTIGSKEHGQ 484
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
L N D S ++ GP +F ++CG++H ++T +G K+++WG+G
Sbjct: 485 LG-------NSRSDNTSICMV--EGPLKTEFVK--DISCGSSHVAVLTMNG-KVFTWGKG 532
Query: 343 RSGVLGTGKTIDFFAPAIV 361
G LG G +D +P +V
Sbjct: 533 TEGQLGLGDYVDRSSPTLV 551
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 46/186 (24%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W LG GH + +P +K Q + + S+ CG H ++V+ G V+SWG E
Sbjct: 202 WGDVLGRMSDHGHVPATNISLPRLLKS-SQILNVQSIACGEKHAAIVTKQGQVFSWGEEN 260
Query: 280 G--LGLCPNASLTRNEAGDAISPILIS---------------------GNGPHGPKF--- 313
G LG + S++ + D+++ + G G H F
Sbjct: 261 GGRLGHKTSDSVSDPKIIDSLASTPVKTIAFGAKYTCAVSVSGELYEWGEGIHSLGFGKN 320
Query: 314 ---QDP---------------VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P +++ACG HT +++ G KL+++G G GVLG G T
Sbjct: 321 QCQRSPWFPHKLISTSDGISVLKIACGQWHTAIISSLG-KLYTYGYGTFGVLGHGDTHSV 379
Query: 356 FAPAIV 361
P V
Sbjct: 380 VHPKEV 385
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 40/91 (43%), Gaps = 11/91 (12%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CGS HV L G+ + +WG GQLGLGD R P ++E
Sbjct: 507 VKDISCGSSHVAVLTMNGKVF--------TWGKGTEGQLGLGDYVDRSSPTLVEALEDKQ 558
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + C S TA+ + + +S+C
Sbjct: 559 ---VDSIACSSNFTAVTCVHREISSKDQSVC 586
Score = 38.5 bits (88), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 58/254 (22%), Positives = 87/254 (34%), Gaps = 86/254 (33%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + + G + I + G L+ +G G F ++ S P V
Sbjct: 339 ISVLKIACGQWHTAIISSLGKLYTYG---------YGTFGVLGHGDTHSVVHPKEVESLR 389
Query: 126 GHTVVKVACGSEHVVALVSAGETYK----GEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
G VACG H A+V T K G L ++WG G+LG +++S+L P +
Sbjct: 390 GSRAKSVACGPWHTAAIVETSGTLKSSAPGGKL--FTWGDAGGGKLGHTNKKSKLVPTRV 447
Query: 182 ET-----FNQ-----------------------------------------DSPWA---V 192
E+ F Q + P V
Sbjct: 448 ESLIDCDFTQVSCGMSLTAVLTITGVVFTIGSKEHGQLGNSRSDNTSICMVEGPLKTEFV 507
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG--------TTQSALVPEQV 244
+++CGS H A+LT + +T+G G GQLG G T AL +QV
Sbjct: 508 KDISCGSSHVAVLT--------MNGKVFTWGKGTEGQLGLGDYVDRSSPTLVEALEDKQV 559
Query: 245 KELPQYVYLVSVDC 258
+ +V C
Sbjct: 560 DSIACSSNFTAVTC 573
>gi|354584103|ref|ZP_09003000.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
gi|353197365|gb|EHB62858.1| Listeria/Bacterioides repeat-containing protein [Paenibacillus
lactis 154]
Length = 1286
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/232 (31%), Positives = 101/232 (43%), Gaps = 39/232 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
K+ G H +LVS+GE YSWG + GQLG G +R P + + N
Sbjct: 37 KLVAGYYHTASLVSSGE--------VYSWGYGDRGQLGNGTWSARTTPVMAKGLNH---- 84
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V G T L + WT+G ENGQLG GT VP QV L
Sbjct: 85 -VIDVHTGVRSTMALRS--------DGTVWTWGSNENGQLGIGTVTDMNVPGQVSGLSG- 134
Query: 251 VYLVSVDCGL-FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V GL +H+ +S G VW+WG L +L +N +P+ ++G
Sbjct: 135 --IKAVSGGLGYHSMALSEDGSVWTWGKNDNGELGNGTTLQQN------TPVQVAG---- 182
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D +A G ++ + DG +W+WG G LG G T D + P V
Sbjct: 183 ---LNDVTAIAAGGYFSLALKSDG-TVWAWGVNGDGELGDGTTTDRYVPVQV 230
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 123/290 (42%), Gaps = 48/290 (16%)
Query: 74 ICSVKAG-GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
I +V G G S+A+ G++W WG D+ G + + TP V + V +
Sbjct: 135 IKAVSGGLGYHSMALSEDGSVWTWGKN---DNGELGNGTTLQQNTPVQVAGLN--DVTAI 189
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G +AL S G ++WG N +G+LG G R P + V
Sbjct: 190 AAGGYFSLALKSDG--------TVWAWGVNGDGELGDGTTTDRYVPVQVAGLTD-----V 236
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G H+ +T + W +G G LG GT + P Q+K L +
Sbjct: 237 MAIAAGGSHSLAVTQ--------DGTVWAWGKNTYGTLGDGTRTNRTRPVQIKNLQ---H 285
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V+V G +H+ + G+VWSWG ++ LG+ NAS ++ P+ +SG
Sbjct: 286 IVAVAGGGYHSLALDRTGNVWSWGDNSQRQLGVGSNAS--------SLIPVPVSG----- 332
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ ++A G H+V + DG +W WG G LG G + P +
Sbjct: 333 --IEHVREIAAGGFHSVAMKKDG-TVWGWGFNGGGQLGDGTSSTRDTPTL 379
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 113/291 (38%), Gaps = 48/291 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKV 132
+ V G ++A+ + G +W WG+ + + + G V+ P V G V
Sbjct: 85 VIDVHTGVRSTMALRSDGTVWTWGS----NENGQLGIGTVTDMNVPGQVSGLSGIKAVSG 140
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G H +AL ED ++WG N+NG+LG G + P + N V
Sbjct: 141 GLG-YHSMAL--------SEDGSVWTWGKNDNGELGNGTTLQQNTPVQVAGLND-----V 186
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G + + L + W +G+ +G+LG GTT VP QV L
Sbjct: 187 TAIAAGGYFSLALKS--------DGTVWAWGVNGDGELGDGTTTDRYVPVQVAGLTD--- 235
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++++ G H+ V+ G VW+WG LG + TR P+ I
Sbjct: 236 VMAIAAGGSHSLAVTQDGTVWAWGKNTYGTLGDGTRTNRTR--------PVQIK------ 281
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q V VA G H+ L D +WSWG LG G P V
Sbjct: 282 -NLQHIVAVAGGGYHS-LALDRTGNVWSWGDNSQRQLGVGSNASSLIPVPV 330
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 78/194 (40%), Gaps = 32/194 (16%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T+ P+++ ++ AGG SLA+ G +W WG T G +
Sbjct: 216 LGDGTTTDRYVPVQVAGLTDVMAIAAGGSHSLAVTQDGTVWAWGKNTY---GTLGDGTRT 272
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ P + + +V VA G H +AL G +SWG N+ QLG+G
Sbjct: 273 NRTRPVQIKNLQ--HIVAVAGGGYHSLALDRTGN--------VWSWGDNSQRQLGVGSNA 322
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
S L P + V E+ G FH+ + + W +G GQLG G
Sbjct: 323 SSLIPVPVSGIEH-----VREIAAGGFHSVAMKK--------DGTVWGWGFNGGGQLGDG 369
Query: 234 TTQSALVPEQVKEL 247
T+ + P K +
Sbjct: 370 TSSTRDTPTLTKAV 383
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 63/138 (45%), Gaps = 21/138 (15%)
Query: 59 SLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF-S 111
+L D ++TN P++I +V GG SLA+D G +W WG+ +S + G S
Sbjct: 265 TLGDGTRTNRTRPVQIKNLQHIVAVAGGGYHSLALDRTGNVWSWGD----NSQRQLGVGS 320
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
SS P PV V ++A G H VA+ +D + WG N GQLG G
Sbjct: 321 NASSLIPVPVSGI--EHVREIAAGGFHSVAM--------KKDGTVWGWGFNGGGQLGDGT 370
Query: 172 RESRLRPKIIETFNQDSP 189
+R P + + +P
Sbjct: 371 SSTRDTPTLTKAVLDTTP 388
>gi|442319170|ref|YP_007359191.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486812|gb|AGC43507.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1095
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/312 (29%), Positives = 128/312 (41%), Gaps = 56/312 (17%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + T+ AP ++ V + SL + + G +W WG+ L D + E
Sbjct: 280 LGDGTTTSRSAPQQVSGLAGVDGVLGAELHSLVLKSDGTVWTWGSNQRGQLGDGTQE--- 336
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
P V G VV VA GS +H VA+++ GE ++WG N GQLG
Sbjct: 337 ---QRLVPVQVMGLSG--VVAVAAGSGQHSVAVMANGE--------VWTWGHNVEGQLGE 383
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G PK + + V G +H +P + W +G GQ
Sbjct: 384 GSSSYSAVPKRSHALVERT-----SVAAGRYHGLA----SKP----DGTVWAWGDNAKGQ 430
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GTT L+P QV P +V+V G + + + G VW+WG + G N S
Sbjct: 431 LGDGTTAQRLLPTQV---PGLTNMVAVAAGHHSSLALKADGTVWAWG-DNANGQLGNGST 486
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
T D +P + P V +A G H + V DG LW+WG +G LG
Sbjct: 487 T-----DRSNPTQV-------PGLTGVVSIAAGPGHALAVKADG-TLWTWGDNNTGQLGD 533
Query: 350 GKTIDFFAPAIV 361
G T+D P V
Sbjct: 534 GTTVDRPIPTQV 545
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/359 (24%), Positives = 135/359 (37%), Gaps = 65/359 (18%)
Query: 3 LQHYYYHYYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLED 62
+Q + H + + F+ +++ C DG P ++ T A ++
Sbjct: 1 MQKHRGHTRIASKAVGLLFMLL-AVSGCQDGG----------PSSPDELATAKAAETAS- 48
Query: 63 DSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW 122
++ V AG +LA+ + G +W WG+ G SL P W
Sbjct: 49 ----------RLGLVAAGRHHTLAVRSDGTVWAWGDNAY---GQLGNGSLQDQRVPVRAW 95
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+ V G H +A+ S D ++WG NN GQLG G R P +
Sbjct: 96 GLW--NISAVGAGDLHSLAMKS--------DGTVWTWGGNNFGQLGDGTTTGRQAPVQVP 145
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
+ V V G H+ L + W +G G+LG GTT L+P
Sbjct: 146 GLGE-----VVRVAAGFSHSLAL--------KTDGTVWAWGSNGAGRLGDGTTTQRLMPV 192
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
QV+ LP + ++ G H+ + G VW+WG N L AG + P L
Sbjct: 193 QVQGLPT---IKAIAAGNAHSLALDGTGRVWAWGSNS------NGQLGDTTAGYRMLPAL 243
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ P + ++ G+ H+++ DG W WG G LG G T AP V
Sbjct: 244 V-------PGLTNATGLSAGSNHSLVRQADG-TTWVWGANTYGQLGDGTTTSRSAPQQV 294
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 92/324 (28%), Positives = 128/324 (39%), Gaps = 68/324 (20%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D + T P++ I ++ AG SLA+D G +W WG N L D T G+
Sbjct: 180 LGDGTTTQRLMPVQVQGLPTIKAIAAGNAHSLALDGTGRVWAWGSNSNGQLGD--TTAGY 237
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
++ + P ++ GS H + + D + WGAN GQLG G
Sbjct: 238 RMLPALVPGLT------NATGLSAGSNHSL--------VRQADGTTWVWGANTYGQLGDG 283
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
SR P+ + V V H+ +L + WT+G + GQL
Sbjct: 284 TTTSRSAPQQVSGLA-----GVDGVLGAELHSLVLKS--------DGTVWTWGSNQRGQL 330
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNAS 288
G GT + LVP QV L V V+ G H+ V + G+VW+WG +E LG
Sbjct: 331 GDGTQEQRLVPVQVMGLSG-VVAVAAGSGQ-HSVAVMANGEVWTWGHNVEGQLG------ 382
Query: 289 LTRNEAGDAISPILISGNGPHGPK----FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
E + S + PK + VA G H + DG +W+WG
Sbjct: 383 ----EGSSSYSAV---------PKRSHALVERTSVAAGRYHGLASKPDG-TVWAWGDNAK 428
Query: 345 GVLGTGKTIDFFAPAIVLWPPLTE 368
G LG G T P V P LT
Sbjct: 429 GQLGDGTTAQRLLPTQV--PGLTN 450
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/300 (28%), Positives = 117/300 (39%), Gaps = 50/300 (16%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPV 121
K +H A ++ SV AG LA G +W WG+ L D +T L+ + P
Sbjct: 393 KRSH-ALVERTSVAAGRYHGLASKPDGTVWAWGDNAKGQLGDGTTA--QRLLPTQVPGLT 449
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
+V VA G +AL + D ++WG N NGQLG G R P +
Sbjct: 450 ------NMVAVAAGHHSSLALKA--------DGTVWAWGDNANGQLGNGSTTDRSNPTQV 495
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
V + G H + + WT+G GQLG GTT +P
Sbjct: 496 PGLT-----GVVSIAAGPGHALAV--------KADGTLWTWGDNNTGQLGDGTTVDRPIP 542
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
QV P +VSV GL+H+ VV G VW+WG G + T I P+
Sbjct: 543 TQV---PGVTGVVSVAAGLYHSLVVKVDGTVWAWGSNY-EGQLGGGTTT-------IRPV 591
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P V + G H++ + DG +W+WG G LG G T P V
Sbjct: 592 P-----SQTPNLTGVVAITAGLYHSLALKTDG-TVWAWGYNLHGQLGNGNTTTQQVPTQV 645
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 92/345 (26%), Positives = 134/345 (38%), Gaps = 90/345 (26%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L + S + + P++ I +V AG + SLA+ + G +W WG L D +T G
Sbjct: 80 LGNGSLQDQRVPVRAWGLWNISAVGAGDLHSLAMKSDGTVWTWGGNNFGQLGDGTTTG-- 137
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+PV VV+VA G H +AL + D ++WG+N G+LG G
Sbjct: 138 ------RQAPVQVPGLGEVVRVAAGFSHSLALKT--------DGTVWAWGSNGAGRLGDG 183
Query: 171 DRESRLRP---------KIIETFNQDS--------PWAVYEVTCGSFHTALLTHRKRP-- 211
RL P K I N S WA + G +R P
Sbjct: 184 TTTQRLMPVQVQGLPTIKAIAAGNAHSLALDGTGRVWAWGSNSNGQLGDTTAGYRMLPAL 243
Query: 212 --------------NDML----ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
N L + W +G GQLG GTT S P+QV L +
Sbjct: 244 VPGLTNATGLSAGSNHSLVRQADGTTWVWGANTYGQLGDGTTTSRSAPQQVSGLAGVDGV 303
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA-----ISPILISGNGP 308
+ + H+ V+ S G VW+WG + R + GD + P+ + G
Sbjct: 304 LGAE---LHSLVLKSDGTVWTWGSNQ-----------RGQLGDGTQEQRLVPVQVMG--- 346
Query: 309 HGPKFQDPVQVACGAA-HTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V VA G+ H+V V +G ++W+WG G LG G +
Sbjct: 347 ----LSGVVAVAAGSGQHSVAVMANG-EVWTWGHNVEGQLGEGSS 386
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 100/233 (42%), Gaps = 43/233 (18%)
Query: 56 APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSST 106
A L D + T P ++ +V AG SLA+ G +W WG L D +T
Sbjct: 826 AKGQLGDGTTTRRLVPTQVPGLTGVVAVAAGYAHSLALKADGTVWGWGENIYGQLGDGTT 885
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVV-KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
P+ G TVV +A G+ H +A + D ++WG N +G
Sbjct: 886 ------TQRVAPT---QAQGLTVVLSMASGTYHGLA--------RKADGTLWAWGYNAHG 928
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
QLG+G +RL P ++ + + V ++ H+ L +P + W +G
Sbjct: 929 QLGIGTTTTRLAPTLVPSLS-----GVVSLSATHQHSLAL----KP----DGTVWAWGYN 975
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
NGQLG GTT + VP Q P + +V G ++ V + G VWSWG+
Sbjct: 976 SNGQLGDGTTTTRHVPTQA---PSLSSVKAVSAGFEYSLAVKADGTVWSWGIN 1025
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 130/349 (37%), Gaps = 82/349 (23%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L + + T + P ++ S+ AG SLAI G++W WG L D +T
Sbjct: 631 LGNGNTTTQQVPTQVPGFSGGVSLGAGIYHSLAIKTDGSVWTWGYNYRGQLGDGTTTSRT 690
Query: 111 SL--VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ V+ FT V +A G H VAL + D ++WG+N+ GQLG
Sbjct: 691 TPTQVAGFTG----------VSFLAAGEFHSVALRT--------DGTAWAWGSNDKGQLG 732
Query: 169 LGDRESRLRPKIIETF----------------NQDSPWAVYEVTCGSFHTALLTHRKRPN 212
G P + + + WA + T G + P
Sbjct: 733 DGSARWHYAPTLSRLVGARGLAAGDRFTAARKSDGTVWAWGDNTYGQLGDGTTLATRSPA 792
Query: 213 DM--------------------LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ ++ WT+G GQLG GTT LVP QV P
Sbjct: 793 QVSGLTDVEGLAAGEGHVVVVKMDGTVWTWGNNAKGQLGDGTTTRRLVPTQV---PGLTG 849
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V+V G H+ + + G VW WG E G + + T+ ++P G
Sbjct: 850 VVAVAAGYAHSLALKADGTVWGWG-ENIYGQLGDGTTTQR-----VAPTQAQG------- 896
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +A G H + DG LW+WG G LG G T AP +V
Sbjct: 897 LTVVLSMASGTYHGLARKADG-TLWAWGYNAHGQLGIGTTTTRLAPTLV 944
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 125/332 (37%), Gaps = 72/332 (21%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV AG SL + G +W WG+ + GG + + PS + G VV +
Sbjct: 551 VVSVAAGLYHSLVVKVDGTVWAWGSNY--EGQLGGGTTTIRPV-PSQTPNLTG--VVAIT 605
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL + D ++WG N +GQLG G+ ++ P + F+
Sbjct: 606 AGLYHSLALKT--------DGTVWAWGYNLHGQLGNGNTTTQQVPTQVPGFSGG-----V 652
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G +H+ + + WT+G GQLG GTT S P QV +L
Sbjct: 653 SLGAGIYHSLAI--------KTDGSVWTWGYNYRGQLGDGTTTSRTTPTQVAGFTGVSFL 704
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGM-EKG---------------------LGLCPNASLTR 291
G FH+ + + G W+WG +KG GL T
Sbjct: 705 A---AGEFHSVALRTDGTAWAWGSNDKGQLGDGSARWHYAPTLSRLVGARGLAAGDRFTA 761
Query: 292 NEAGDAISPILISGNGPHGP-------KFQDPVQV---------ACGAAHTVLVTDDGYK 335
D + G+ +G + P QV A G H V+V DG
Sbjct: 762 ARKSDGT--VWAWGDNTYGQLGDGTTLATRSPAQVSGLTDVEGLAAGEGHVVVVKMDG-T 818
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
+W+WG G LG G T P V P LT
Sbjct: 819 VWTWGNNAKGQLGDGTTTRRLVPTQV--PGLT 848
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 72/166 (43%), Gaps = 17/166 (10%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ W +G GQLG+G+ Q VP + L + +V G H+ + S G VW+W
Sbjct: 66 DGTVWAWGDNAYGQLGNGSLQDQRVPVRAWGLWN---ISAVGAGDLHSLAMKSDGTVWTW 122
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G G + + T +A P+ + P + V+VA G +H++ + DG
Sbjct: 123 GGNN-FGQLGDGTTTGRQA-----PVQV-------PGLGEVVRVAAGFSHSLALKTDG-T 168
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLD 381
+W+WG +G LG G T P V P + ++ LD
Sbjct: 169 VWAWGSNGAGRLGDGTTTQRLMPVQVQGLPTIKAIAAGNAHSLALD 214
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 66/174 (37%), Gaps = 32/174 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ S+ A SLA+ G +W WG N L D +T V + PS +V
Sbjct: 950 VVSLSATHQHSLALKPDGTVWAWGYNSNGQLGDGTTT--TRHVPTQAPSL------SSVK 1001
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V+ G E+ +A+ + D +SWG N+ GQLG G R P + N
Sbjct: 1002 AVSAGFEYSLAVKA--------DGTVWSWGINDRGQLGSGTATPRATPTQVAGLN----- 1048
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
VT A M FG E GQLG G T L P QV
Sbjct: 1049 ---SVTLLLAARAHALVVSADGTMRG-----FGDNEAGQLGAGDTLIRLAPNQV 1094
>gi|212721370|ref|NP_001132850.1| uncharacterized protein LOC100194342 [Zea mays]
gi|194695574|gb|ACF81871.1| unknown [Zea mays]
gi|413924971|gb|AFW64903.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 418
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 129/309 (41%), Gaps = 56/309 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V AG S A+ G L++WG G V S TP+ V V V
Sbjct: 117 RVVEVSAGNHHSCAVTADGKLFVWGRNSGGQLGLGKGAGKVVS-TPTKVDCLTDLRVKTV 175
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL---------RPKIIET 183
A GSEH +A+ GE SWGA +G+LG G + S L P++I+
Sbjct: 176 ALGSEHSIAVTEEGEVL--------SWGAAGSGRLGHGRQSSILGFSLTSTEYTPRLIKN 227
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
F+ + ++ G H+A + + F G+ + G G P
Sbjct: 228 FDGIK---IKKIAAGMLHSACIDEKGT----------LFIFGQKTEKGFGRPNEEFRPNI 274
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V+E+P + V CG +HT VV+ +GD++SWG + N L SP ++
Sbjct: 275 VEEIP---FSEEVACGGYHTCVVTDSGDLYSWGSNE------NGCLGLGGTDMVRSPEIL 325
Query: 304 SGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSW----------GRGRSGVLGTGKT 352
+ F+ PV +V+CG HT +V+ D W W G G LG G
Sbjct: 326 KSS-----LFKLPVSKVSCGWKHTAVVSGDDIYTWGWGGANGTFFEEGHSSGGQLGHGND 380
Query: 353 IDFFAPAIV 361
+D+F P +V
Sbjct: 381 VDYFEPMMV 389
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/288 (27%), Positives = 118/288 (40%), Gaps = 43/288 (14%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSST 106
L GA + +K + +++ +V G S+A+ G + WG S+
Sbjct: 150 LGKGAGKVVSTPTKVDCLTDLRVKTVALGSEHSIAVTEEGEVLSWGAAGSGRLGHGRQSS 209
Query: 107 EGGFSLVSS-FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
GFSL S+ +TP + +F G + K+A G H + G +
Sbjct: 210 ILGFSLTSTEYTPRLIKNFDGIKIKKIAAGMLHSACIDEKGTLFI----------FGQKT 259
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
+ G G RP I+E + P++ EV CG +HT ++T D+ +++G
Sbjct: 260 EKGFGRPNEEFRPNIVE----EIPFS-EEVACGGYHTCVVTDS---GDL-----YSWGSN 306
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD---VWSWGMEKGL- 281
ENG LG G T PE +K + + V CG HT+VVS GD W WG G
Sbjct: 307 ENGCLGLGGTDMVRSPEILKSSLFKLPVSKVSCGWKHTAVVS--GDDIYTWGWGGANGTF 364
Query: 282 ---GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
G L D P+++ P G + V V+CG HT
Sbjct: 365 FEEGHSSGGQLGHGNDVDYFEPMMV----PFGTNAR-AVHVSCGFNHT 407
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
V WG + G+LGLG ESR P + F + + CG HT LT R
Sbjct: 29 VAALWGNGDYGRLGLGSLESRWSPTVCPFFLARAADPPASLACGGAHTLFLTQNGR---- 84
Query: 215 LESMCWTFGLGENGQLGHGTTQSALV-PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
+ GL + GQLG GT+ + ++ P ++ + V V V G H+ V++ G ++
Sbjct: 85 ----VFATGLNDFGQLGIGTSVTHMLEPVEISGFHERV--VEVSAGNHHSCAVTADGKLF 138
Query: 274 SWGMEKG--LGLCPNAS--LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
WG G LGL A ++ D ++ + + VA G+ H++ V
Sbjct: 139 VWGRNSGGQLGLGKGAGKVVSTPTKVDCLTDLRVK-------------TVALGSEHSIAV 185
Query: 330 TDDGYKLWSWGRGRSGVLGTGK 351
T++G L SWG SG LG G+
Sbjct: 186 TEEGEVL-SWGAAGSGRLGHGR 206
>gi|444516741|gb|ELV11274.1| E3 ubiquitin-protein ligase HERC2 [Tupaia chinensis]
Length = 894
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/254 (29%), Positives = 118/254 (46%), Gaps = 38/254 (14%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 524 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 575
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 576 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 627
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG L
Sbjct: 628 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTDNGQVWSWGDGD------YGKL 680
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 681 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 732
Query: 348 GTGKTIDFFAPAIV 361
G G P ++
Sbjct: 733 GHGTEEHVRYPKLL 746
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 80/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ + G +W WG+ D G TP + VVKV CGS+
Sbjct: 655 SGDAQTLAVTDNGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 711
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 712 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 760
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 761 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 809
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 810 ACGPAQSFAWSSCSE-WSIGLR 830
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 509 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGG 568
Query: 282 GLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L ++ E P +IS +G K V +ACG+ ++ +T +G +L++WG
Sbjct: 569 RLGHGDTVPLEE------PKVISAFSGKQAGKHV--VHIACGSTYSAAITAEG-ELYTWG 619
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
RG G LG G + D P +V
Sbjct: 620 RGNYGRLGHGSSEDEAIPMLV 640
>gi|156396932|ref|XP_001637646.1| predicted protein [Nematostella vectensis]
gi|156224760|gb|EDO45583.1| predicted protein [Nematostella vectensis]
Length = 1345
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 136/293 (46%), Gaps = 70/293 (23%)
Query: 116 FTPSPVWDFHGHTVVKVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
FT SP+ G+ V+++A GS+ H +AL +GE + SWG + G+LG G+
Sbjct: 559 FTLSPISALQGYVVIQIATSRGSDGHSLALTDSGEVF--------SWGDGDYGKLGHGNS 610
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ + RP+ IE + V + CG H+A++T ++ +TFG G+ G+LGH
Sbjct: 611 DRQRRPRQIEALRGEE---VVNMACGFKHSAVVT--------VDGKLFTFGNGDYGRLGH 659
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG----MEKGLGLCPNA 287
G + + PE+V L ++ + V CGL HT V+S+ G+ VW++G + GLG C
Sbjct: 660 GNSANKKTPERVTALEKHA-IGQVACGLNHTLVLSADGNTVWAFGDGDYGKLGLGSC--T 716
Query: 288 SLTRNEAGDAISPI-------------LISGNGP-----------------HGPKFQDPV 317
+ T +A D ++ I +++ +G GP+ +
Sbjct: 717 AKTSPQAIDVLAGIGCKKICCGTQFSVVLTNDGRVFSFGQERLTGQPEGRLRGPQKPQQI 776
Query: 318 Q---------VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q V GA H + +T G ++W WG G LG G + P ++
Sbjct: 777 QALASHFIDDVCVGAEHVLALTSTG-EVWGWGNNVDGQLGLGHSNAQREPCVI 828
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ ++ G S + G L+ +GN D G + + TP V H + +V
Sbjct: 626 EVVNMACGFKHSAVVTVDGKLFTFGNG---DYGRLGHGNSANKKTPERVTALEKHAIGQV 682
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H + L + G T +++G + G+LGLG ++ P+ I+ +
Sbjct: 683 ACGLNHTLVLSADGNT-------VWAFGDGDYGKLGLGSCTAKTSPQAIDVL---AGIGC 732
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--GTTQSALVPEQVKELPQY 250
++ CG+ + +LT+ R F G+ G G + P+Q++ L +
Sbjct: 733 KKICCGTQFSVVLTNDGR----------VFSFGQERLTGQPEGRLRGPQKPQQIQALASH 782
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWG 276
++ V G H ++S G+VW WG
Sbjct: 783 -FIDDVCVGAEHVLALTSTGEVWGWG 807
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 17/134 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KIC G S+ + N G ++ +G L EG L P + H + V
Sbjct: 734 KIC---CGTQFSVVLTNDGRVFSFGQERL-TGQPEG--RLRGPQKPQQIQALASHFIDDV 787
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G+EHV+AL S GE + WG N +GQLGLG ++ P +I + +
Sbjct: 788 CVGAEHVLALTSTGEV--------WGWGNNVDGQLGLGHSNAQREPCVIPDLKGKN---I 836
Query: 193 YEVTCGSFHTALLT 206
+++ G H+A T
Sbjct: 837 RQISAGRNHSAAWT 850
>gi|432863737|ref|XP_004070157.1| PREDICTED: E3 ISG15--protein ligase HERC5-like [Oryzias latipes]
Length = 892
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 98/209 (46%), Gaps = 30/209 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL----VSSFTPSPVWDFHGH 127
I + V G ++A+ G ++ WG ++ G L S +P V G
Sbjct: 117 IPVSQVACGSRHTVALTKEGQVYTWGQ------NSRGQLGLGKKGCSISSPQCVRSLSGM 170
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V+V+ G +H AL +G + WG N+ GQLGLGD + R P +++ N
Sbjct: 171 PLVQVSAGGDHSFALSVSGSVF--------GWGRNDCGQLGLGDSQDRCTPTSVDSLNLK 222
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ ++CG HTA+LT +TFG G+ GQLGH ++++ L P V EL
Sbjct: 223 KTTS---ISCGKDHTAILTK--------HGTVFTFGSGQFGQLGHNSSRNELRPRLVAEL 271
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ + CG +HT V+ ++S+G
Sbjct: 272 -WGAKVTRIACGRYHTLVLQENNKIYSFG 299
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/238 (24%), Positives = 96/238 (40%), Gaps = 51/238 (21%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V CG + V+ L G Y+ + ++ P+++E F +
Sbjct: 80 VGCGDDEVILLSEKGSVYR------------------VDVTQALYLPRMLEAFCR---IP 118
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS HT LT E +T+G GQLG G ++ Q +
Sbjct: 119 VSQVACGSRHTVALTK--------EGQVYTWGQNSRGQLGLGKKGCSISSPQCVRSLSGM 170
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNG 307
LV V G H+ +S +G V+ WG + GLG ++ D +P +
Sbjct: 171 PLVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLG----------DSQDRCTPTSVDS-- 218
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV--LW 363
+ ++CG HT ++T G ++++G G+ G LG + + P +V LW
Sbjct: 219 ---LNLKKTTSISCGKDHTAILTKHG-TVFTFGSGQFGQLGHNSSRNELRPRLVAELW 272
>gi|432847192|ref|XP_004065976.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1049
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 98/206 (47%), Gaps = 27/206 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL--VSSFTPSPVWDFHGHTVVK 131
I V G +A+ G L+ WG +SS + G S +PSPV G + +
Sbjct: 138 ISQVVCGNQHCIALSRDGQLFTWGQ----NSSGQLGLGKGETSKLSPSPVKSLAGIPLAQ 193
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ G +H AL +G + WG N GQLGL D++ R P I+ S
Sbjct: 194 ITAGGDHCFALSLSG--------AVFGWGKNKAGQLGLNDKQDRAVPCHIKFLR--SQRV 243
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
VY ++CG HTA LT +TFG G GQLGHG++ + L+P +V EL
Sbjct: 244 VY-ISCGDEHTAALTK--------SGGLFTFGDGSRGQLGHGSSNNELLPRRVMEL-MGT 293
Query: 252 YLVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG HT + V S+G V+++G
Sbjct: 294 EVSQITCGRHHTLAFVPSSGTVYAFG 319
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/326 (25%), Positives = 139/326 (42%), Gaps = 61/326 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHT 128
KI V G S+A++ G +++WG + G L ++ T P + H+
Sbjct: 84 KITMVSCGRAHSVAVNEQGQVFVWG------AGDGGQLGLETAETAVRIPRLLKKLCDHS 137
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQD 187
+ +V CG++H +AL G+ ++WG N++GQLGLG E S+L P +++
Sbjct: 138 ISQVVCGNQHCIALSRDGQ--------LFTWGQNSSGQLGLGKGETSKLSPSPVKSL-AG 188
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A ++T G H L+ L + +G + GQLG Q VP +K L
Sbjct: 189 IPLA--QITAGGDHCFALS--------LSGAVFGWGKNKAGQLGLNDKQDRAVPCHIKFL 238
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEA---GDAISP 300
+ +V + CG HT+ ++ +G ++++G + G G N L R G +S
Sbjct: 239 -RSQRVVYISCGDEHTAALTKSGGLFTFGDGSRGQLGHGSSNNELLPRRVMELMGTEVS- 296
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
Q+ CG HT+ ++++G G LGTG D +P
Sbjct: 297 -----------------QITCGRHHTLAFVPSSGTVYAFGCNSHGQLGTGILADLRSPH- 338
Query: 361 VLWPPLTEEFKQDELNTGGLDDEIKT 386
P+ +F L G + I T
Sbjct: 339 ----PVKNDFLTLNLRKGKVYLRIDT 360
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 45/291 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V GG +L + G+++ G+ +S + G + +P V + V+CG
Sbjct: 38 VACGGQHTLFLLQDGSVYTCGS----NSCGQLGHDKAGN-SPELVGALDTQKITMVSCGR 92
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEV 195
H VA+ G+ + WGA + GQLGL E+ +R P++++ S + +V
Sbjct: 93 AHSVAVNEQGQVF--------VWGAGDGGQLGLETAETAVRIPRLLKKLCDHS---ISQV 141
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELPQYVYLV 254
CG+ H L+ + +T+G +GQLG G + S L P VK L + L
Sbjct: 142 VCGNQHCIALSR--------DGQLFTWGQNSSGQLGLGKGETSKLSPSPVKSLAG-IPLA 192
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF- 313
+ G H +S +G V+ WG K L N+ D P I KF
Sbjct: 193 QITAGGDHCFALSLSGAVFGWGKNKA------GQLGLNDKQDRAVPCHI--------KFL 238
Query: 314 --QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q V ++CG HT +T G L+++G G G LG G + + P V+
Sbjct: 239 RSQRVVYISCGDEHTAALTKSG-GLFTFGDGSRGQLGHGSSNNELLPRRVM 288
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/204 (25%), Positives = 81/204 (39%), Gaps = 29/204 (14%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A I + + AGG A+ +GA++ WG + G P + V
Sbjct: 187 AGIPLAQITAGGDHCFALSLSGAVFGWGK---NKAGQLGLNDKQDRAVPCHIKFLRSQRV 243
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDS 188
V ++CG EH AL +G +++G + GQLG G + L P +++E +
Sbjct: 244 VYISCGDEHTAALTKSGG--------LFTFGDGSRGQLGHGSSNNELLPRRVMELMGTE- 294
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK--- 245
V ++TCG HT P+ + FG +GQLG G P VK
Sbjct: 295 ---VSQITCGRHHTLAFV----PS---SGTVYAFGCNSHGQLGTGILADLRSPHPVKNDF 344
Query: 246 ---ELPQYVYLVSVDCGLFHTSVV 266
L + + +D G +V+
Sbjct: 345 LTLNLRKGKVYLRIDTGFLKYTVI 368
>gi|350593458|ref|XP_003483691.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Sus
scrofa]
Length = 969
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 118/254 (46%), Gaps = 38/254 (14%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V ++K+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 678 TLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 729
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 730 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 781
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG L
Sbjct: 782 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD------YGKL 834
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 835 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 886
Query: 348 GTGKTIDFFAPAIV 361
G G P ++
Sbjct: 887 GHGTEEHVRYPKLL 900
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 71/183 (38%), Gaps = 27/183 (14%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 809 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 865
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 866 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 914
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 915 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEP-SALPGLDTKHIVGI 963
Query: 257 DCG 259
CG
Sbjct: 964 ACG 966
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 67/141 (47%), Gaps = 12/141 (8%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 663 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIIKIAAHSDGHHYLALAATGEVYSWGCGDGG 722
Query: 282 GLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L ++ E P +IS +G K V +ACG+ ++ +T +G +L++WG
Sbjct: 723 RLGHGDTVPLEE------PKVISAFSGKQAGKHV--VHIACGSTYSAAITAEG-ELYTWG 773
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
RG G LG G + D P +V
Sbjct: 774 RGNYGRLGHGSSEDEAIPMLV 794
>gi|395501386|ref|XP_003755076.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Sarcophilus harrisii]
Length = 979
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 117/276 (42%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ E+++ + P +++ + I+I + G SLA+
Sbjct: 113 DGQLGLPGT--------EEYIRV--PRNIKSLTD------IQIVQIACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG GF L +P + G +VA G H L +G
Sbjct: 157 EVFSWGQN--KHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRFVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG GT + VP +K L + +V + CG +H+ +S +V+S
Sbjct: 104 QVYAW--GLDTDGQLGLPGTEEYIRVPRNIKSLTD-IQIVQIACGYYHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L L R + I +L G F QVA G AH+ ++T G
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLL-------GIPF---TQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D F P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLL 236
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG D+ + G + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG----LDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
+ACG H +AL E + SWG N +GQLGLG + + + P++I++ P+
Sbjct: 142 IACGYYHSLALSKGSEVF--------SWGQNKHGQLGLGFELKRQSSPQLIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V G H+ +LT L + +G + GQLG VP +K L +
Sbjct: 193 T--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV------- 288
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 --FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLGTGKTIDF 355
++WG G LG T ++
Sbjct: 106 YAWGLDTDGQLGLPGTEEY 124
>gi|383455292|ref|YP_005369281.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
gi|380729146|gb|AFE05148.1| hypothetical protein COCOR_03305 [Corallococcus coralloides DSM
2259]
Length = 744
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 142/341 (41%), Gaps = 63/341 (18%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPD--SLEDDSKTNHKAPI------KICSVKAGGMMSLA 86
+ ++SL C GA D L D + + P ++ +V AG SLA
Sbjct: 149 VALGATHSLALCYDGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQEVVAVAAGANHSLA 208
Query: 87 IDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+ + G +W WG + L D +T V+ P P+ G +V VA G+ H +AL
Sbjct: 209 VLSDGTVWAWGENYDGQLGDGTT------VTRRVPVPIQGLSG--IVAVASGTSHSLAL- 259
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
Y G ++WG+N +GQLG G SR P + + + V G ++
Sbjct: 260 ----RYDGN---VWAWGSNYSGQLGDGSSLSRSSPVQVTELS-----GIVSVEGGPDYSM 307
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+ + + WT+G+ GQLG GTT + VP Q L +V+V G H
Sbjct: 308 AVRY--------DGTVWTWGINTYGQLGDGTTIARSVPVQTSGLSG---VVAVAAGRTHA 356
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK--FQDPVQVAC 321
+ + +W+WG + GD + S P+ + V +A
Sbjct: 357 LAMRANNSIWAWGGN-----------VNGQRGDESRSVYFS------PRTILNEVVTMAA 399
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
H++ V DG LW+WG G LG G T + +APA VL
Sbjct: 400 TNDHSLAVRSDG-GLWAWGANNEGQLGDGTTKNRWAPAEVL 439
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 129/285 (45%), Gaps = 43/285 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S+ +G S+A+ + G +W WG D G +L + P V G V VA
Sbjct: 96 MVSIDSGDDFSMAVRSDGTVWAWGRN---DDGQLGDGTLSTRGDPVQVQGLSG--VTTVA 150
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +AL Y G ++WGAN++GQLG G +R P+++ + V
Sbjct: 151 LGATHSLALC-----YDGS---VWAWGANDHGQLGDGTSIARRTPQMVAGLQE-----VV 197
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V G+ H+ + + + W +G +GQLG GTT + VP ++ L +
Sbjct: 198 AVAAGANHSLAV--------LSDGTVWAWGENYDGQLGDGTTVTRRVPVPIQGLSG---I 246
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V+V G H+ + G+VW+WG L +SL+R+ SP+ ++ +
Sbjct: 247 VAVASGTSHSLALRYDGNVWAWGSNYSGQLGDGSSLSRS------SPVQVT-------EL 293
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
V V G +++ V DG +W+WG G LG G TI P
Sbjct: 294 SGIVSVEGGPDYSMAVRYDG-TVWTWGINTYGQLGDGTTIARSVP 337
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 96/210 (45%), Gaps = 30/210 (14%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
D ++WG N++GQLG G +R P ++ + V V G+ H+ L +
Sbjct: 111 SDGTVWAWGRNDDGQLGDGTLSTRGDPVQVQGLS-----GVTTVALGATHSLALCY---- 161
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ W +G ++GQLG GT+ + P+ V L + +V+V G H+ V S G
Sbjct: 162 ----DGSVWAWGANDHGQLGDGTSIARRTPQMVAGLQE---VVAVAAGANHSLAVLSDGT 214
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW+WG L ++TR P+ I G V VA G +H++ +
Sbjct: 215 VWAWGENYDGQLGDGTTVTRRV------PVPIQG-------LSGIVAVASGTSHSLALRY 261
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG +W+WG SG LG G ++ +P V
Sbjct: 262 DG-NVWAWGSNYSGQLGDGSSLSRSSPVQV 290
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 120/293 (40%), Gaps = 47/293 (16%)
Query: 60 LEDDSKTNHKAPIKI----CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
L D + N AP ++ SV AG SLA+ + G+LW WG+ + G S
Sbjct: 424 LGDGTTKNRWAPAEVLGNVVSVAAGRRHSLAVRDDGSLWAWGSNTVGQLGDGTGSSRT-- 481
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G + VA GS++ VAL D ++WG N+ GQLG G +R
Sbjct: 482 -IPMQVPGISG--IASVAAGSDYSVALR--------YDRTLWAWGENSYGQLGDGTTVNR 530
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P ++ + + + G+ H +L R W +G +GQLG GTT
Sbjct: 531 HVPTRVQGLS-----GIVAIATGNGH--MLAVRS------NGTVWAWGDNSSGQLGDGTT 577
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+ P QV+ L V + + H+ V G +W+WG+ L + R
Sbjct: 578 INRATPVQVQVLSGIVAVAAG---AAHSLAVRYDGTLWAWGINNTSQLGDGTGIPR---- 630
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ P + G G V V+ H++ V DG LW WG G LG
Sbjct: 631 --LVPTQVQGIG-------SAVAVSAAKHHSLAVLADG-TLWDWGANNYGQLG 673
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 131/307 (42%), Gaps = 55/307 (17%)
Query: 62 DDSKTNHKAPIKI----CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVS 114
D+S++ + +P I ++ A SLA+ + G LW WG L D +T+ +
Sbjct: 378 DESRSVYFSPRTILNEVVTMAATNDHSLAVRSDGGLWAWGANNEGQLGDGTTK------N 431
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
+ P+ V VV VA G H +A+ +D ++WG+N GQLG G S
Sbjct: 432 RWAPAEVLG----NVVSVAAGRRHSLAVR--------DDGSLWAWGSNTVGQLGDGTGSS 479
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R P + + + V GS ++ L + + W +G GQLG GT
Sbjct: 480 RTIPMQVPGIS-----GIASVAAGSDYSVALRYDR--------TLWAWGENSYGQLGDGT 526
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
T + VP +V+ L +V++ G H V S G VW+WG L ++ R
Sbjct: 527 TVNRHVPTRVQGLSG---IVAIATGNGHMLAVRSNGTVWAWGDNSSGQLGDGTTINR--- 580
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+P+ + V VA GAAH++ V DG LW+WG + LG G I
Sbjct: 581 ---ATPVQVQ-------VLSGIVAVAAGAAHSLAVRYDG-TLWAWGINNTSQLGDGTGIP 629
Query: 355 FFAPAIV 361
P V
Sbjct: 630 RLVPTQV 636
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 124/308 (40%), Gaps = 53/308 (17%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + P++ + +V AG +LA+ ++W WG + G S
Sbjct: 326 LGDGTTIARSVPVQTSGLSGVVAVAAGRTHALAMRANNSIWAWGGNV---NGQRGDESRS 382
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
F+P + + VV +A ++H +A+ S G ++WGANN GQLG G +
Sbjct: 383 VYFSPRTILN----EVVTMAATNDHSLAVRSDGG--------LWAWGANNEGQLGDGTTK 430
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+R P E V V G H+ L R + W +G GQLG G
Sbjct: 431 NRWAPA--EVLGN-----VVSVAAGRRHS--LAVRD------DGSLWAWGSNTVGQLGDG 475
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T S +P QV P + SV G ++ + +W+WG L ++ R+
Sbjct: 476 TGSSRTIPMQV---PGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTTVNRHV 532
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
P + G V +A G H + V +G +W+WG SG LG G TI
Sbjct: 533 ------PTRVQG-------LSGIVAIATGNGHMLAVRSNG-TVWAWGDNSSGQLGDGTTI 578
Query: 354 DFFAPAIV 361
+ P V
Sbjct: 579 NRATPVQV 586
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/313 (26%), Positives = 123/313 (39%), Gaps = 63/313 (20%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S + +P++ I SV+ G S+A+ G +W WG + G + +
Sbjct: 276 LGDGSSLSRSSPVQVTELSGIVSVEGGPDYSMAVRYDGTVWTWG---INTYGQLGDGTTI 332
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ P G VV VA G H +A+ + + ++WG N NGQ G R
Sbjct: 333 ARSVPVQTSGLSG--VVAVAAGRTHALAMRA--------NNSIWAWGGNVNGQRGDESRS 382
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P+ I N+ VT + + L R + W +G GQLG G
Sbjct: 383 VYFSPRTI--LNE-------VVTMAATNDHSLAVRS------DGGLWAWGANNEGQLGDG 427
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT++ P +V +VSV G H+ V G +W+WG S T +
Sbjct: 428 TTKNRWAPAEVLG-----NVVSVAAGRRHSLAVRDDGSLWAWG-----------SNTVGQ 471
Query: 294 AGDAIS-----PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
GD P+ + P VA G+ ++V + D LW+WG G LG
Sbjct: 472 LGDGTGSSRTIPMQV-------PGISGIASVAAGSDYSVALRYD-RTLWAWGENSYGQLG 523
Query: 349 TGKTIDFFAPAIV 361
G T++ P V
Sbjct: 524 DGTTVNRHVPTRV 536
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/319 (26%), Positives = 128/319 (40%), Gaps = 63/319 (19%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L D + ++ P++ I SV AG S+A+ LW WG L D +T
Sbjct: 472 LGDGTGSSRTIPMQVPGISGIASVAAGSDYSVALRYDRTLWAWGENSYGQLGDGTT---- 527
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
V+ P+ V G +V +A G+ H++A+ S G ++WG N++GQLG G
Sbjct: 528 --VNRHVPTRVQGLSG--IVAIATGNGHMLAVRSNG--------TVWAWGDNSSGQLGDG 575
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+R P ++ + V G+ H+ + + + W +G+ QL
Sbjct: 576 TTINRATPVQVQVLSGIV-----AVAAGAAHSLAVRY--------DGTLWAWGINNTSQL 622
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G GT LVP QV+ + V+V H+ V + G +W WG L
Sbjct: 623 GDGTGIPRLVPTQVQGIGS---AVAVSAAKHHSLAVLADGTLWDWGANN------YGQLG 673
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGA-------AHTVLVTDDGYKLWSWGRGR 343
RN+ D +P P V A G H++ + DGY + WG
Sbjct: 674 RNQ--DNTNPT------PSKVTTLTGVTEAVGTFGYSIGFGHSLALRSDGYLV-GWGHNT 724
Query: 344 SGVLGTGKTIDFFAPAIVL 362
G LGTG + P + L
Sbjct: 725 YGQLGTGVPENIPVPVLSL 743
>gi|115373190|ref|ZP_01460491.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115369791|gb|EAU68725.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 859
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 49/311 (15%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T+ K P+++ +V+AG S+A+ G +W+WGN D G ++
Sbjct: 592 LGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNN---DFGQLGDGTVT 648
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V G V VA G H +AL D ++WG NN GQLG G
Sbjct: 649 SRAMPVQVSGLTG--VTAVAVGVYHSLALR--------NDGTLWAWGYNNVGQLGNGTSG 698
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P + V + G+ H+ L + W +G GQLG G
Sbjct: 699 IQSTPAQVPGLT-----GVIALAAGNGHSLAL--------RTDGTVWGWGANSFGQLGDG 745
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT P QV P +++++ G F+T + S VW WG K G + ++T+
Sbjct: 746 TTTPRSTPTQV---PGLTNVIALNAGAFYTVALRSERSVWEWG-SKSAGQLGDGTVTQK- 800
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+P+ +SG D +A G AH + + D +W+WG + G +G G
Sbjct: 801 ----TTPVQVSG-------LTDVTALAAGNAHALALRTD-RTVWAWGGNQRGQIGDGTAS 848
Query: 354 DFFAPAIVLWP 364
AP V +P
Sbjct: 849 IMPAPVNVSFP 859
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 126/307 (41%), Gaps = 50/307 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVK 131
I ++ AG SLA+ G++W WG S+ G ++ + G T +
Sbjct: 511 SISALAAGDSHSLALRGNGSVWTWG------SNAYGQLGDGTAIDRATAAQVPGLTDITA 564
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G+ H +AL D + WG+N+ GQLG G SR P + + A
Sbjct: 565 LAAGNHHSLALR--------NDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLS-----A 611
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ V G H+ + L W +G + GQLG GT S +P QV L
Sbjct: 612 MRAVEAGPAHSVAV--------HLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGL---T 660
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ +V G++H+ + + G +W+WG +G N + +G +P + P
Sbjct: 661 GVTAVAVGVYHSLALRNDGTLWAWGYNN-VGQLGNGT-----SGIQSTPAQV-------P 707
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
+ +A G H++ + DG +W WG G LG G T P V P LT
Sbjct: 708 GLTGVIALAAGNGHSLALRTDG-TVWGWGANSFGQLGDGTTTPRSTPTQV--PGLTNVIA 764
Query: 372 QDELNTG 378
LN G
Sbjct: 765 ---LNAG 768
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 130/324 (40%), Gaps = 60/324 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P+++ ++ AG SLA+ + G +W WGN +SS + G
Sbjct: 283 LGDGTTTERATPVQVLGLTSVTALAAGAFHSLALRDDGTVWAWGN----NSSGQLGDGTT 338
Query: 114 SSFTPSPVWDFHGHTVVKVACGS---------EHVVALVSAGETYKGEDLVCYSWGANNN 164
++ P+PV +V+ VA G +H +AL S D ++WG N +
Sbjct: 339 TAR-PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKS--------DGTVWAWGYNLS 389
Query: 165 GQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 224
Q G G +R P + + + G H +L + W +G
Sbjct: 390 RQFGDGMPATRTTPVQVSELTGGT-----ALVAGDLHAVVLKS--------DGTVWAWGD 436
Query: 225 GENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLC 284
+GQLG G T P QV L L + D H+ V S G +W+WG + L
Sbjct: 437 NSSGQLGEGVTPVRAKPMQVSGLAAITALATGDG---HSVAVGSDGGIWAWGDNRRGQLG 493
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ TR P+ +G +A G +H++ + +G +W+WG
Sbjct: 494 IGITATREI------PVQATG-------LASISALAAGDSHSLALRGNG-SVWTWGSNAY 539
Query: 345 GVLGTGKTIDFFAPAIVLWPPLTE 368
G LG G ID A V P LT+
Sbjct: 540 GQLGDGTAIDRATAAQV--PGLTD 561
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 118/305 (38%), Gaps = 44/305 (14%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + + T+ P+++ +V A SLA+ + G +W WG+ G +
Sbjct: 175 LGNGTATDRATPVQVPGLTSVMAVAASEAHSLALRSDGTVWAWGDNGY---GQLGDGTKA 231
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP V G V +A G +SA D ++WG N+ GQLG G
Sbjct: 232 QRTTPVQVLGLAG--VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTT 289
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P + +V + G+FH+ L + W +G +GQLG G
Sbjct: 290 ERATPVQVLGLT-----SVTALAAGAFHSLALRD--------DGTVWAWGNNSSGQLGDG 336
Query: 234 TTQSALVPEQVKELPQYVYLV------SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
TT + P QV L + + S+ H+ + S G VW+WG
Sbjct: 337 TTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGM 396
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
TR +P+ +S + + G H V++ DG +W+WG SG L
Sbjct: 397 PATRT------TPVQVS-------ELTGGTALVAGDLHAVVLKSDG-TVWAWGDNSSGQL 442
Query: 348 GTGKT 352
G G T
Sbjct: 443 GEGVT 447
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 105/283 (37%), Gaps = 55/283 (19%)
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
F+L ++ P+P V+ +H +AL D ++WG N +GQLG
Sbjct: 136 FTLTANACPAP----------AVSAAGDHTLALR--------RDGTVWAWGFNGSGQLGN 177
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G R P + +V V H+ L + W +G GQ
Sbjct: 178 GTATDRATPVQVPGLT-----SVMAVAASEAHSLALRS--------DGTVWAWGDNGYGQ 224
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGL-----FHTSVVSSAGDVWSWGMEKGLGLC 284
LG GT P QV L L + G H+ + S G VW+WG L
Sbjct: 225 LGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLG 284
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ R +P+ + G +A GA H++ + DDG +W+WG S
Sbjct: 285 DGTTTER------ATPVQVLG-------LTSVTALAAGAFHSLALRDDG-TVWAWGNNSS 330
Query: 345 GVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTK 387
G LG G T P V P LT + GG DD + +
Sbjct: 331 GQLGDGTTTARPTPVQV--PGLTSVIA---VAAGGGDDSLGMR 368
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 99/274 (36%), Gaps = 44/274 (16%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
+V A G +LA+ G +W WG S G + TP V +V+ VA
Sbjct: 147 AVSAAGDHTLALRRDGTVWAWG---FNGSGQLGNGTATDRATPVQVPGL--TSVMAVAAS 201
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H +AL S D ++WG N GQLG G + R P + V +
Sbjct: 202 EAHSLALRS--------DGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLA-----GVTAL 248
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
G T + + W +G GQLG GTT P QV L L
Sbjct: 249 AAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTALA- 307
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
G FH+ + G VW+WG L + R +P+ + P
Sbjct: 308 --AGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP------TPVQV-------PGLTS 352
Query: 316 PVQVACGAA---------HTVLVTDDGYKLWSWG 340
+ VA G H++ + DG +W+WG
Sbjct: 353 VIAVAAGGGDDSLGMRGDHSLALKSDG-TVWAWG 385
>gi|395501382|ref|XP_003755074.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Sarcophilus harrisii]
Length = 1057
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 117/276 (42%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ E+++ + P +++ + I+I + G SLA+
Sbjct: 113 DGQLGLPGT--------EEYIRV--PRNIKSLTD------IQIVQIACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG GF L +P + G +VA G H L +G
Sbjct: 157 EVFSWGQN--KHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRFVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG GT + VP +K L + +V + CG +H+ +S +V+S
Sbjct: 104 QVYAW--GLDTDGQLGLPGTEEYIRVPRNIKSLTD-IQIVQIACGYYHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L L R + I +L G F QVA G AH+ ++T G
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLL-------GIPF---TQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D F P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLL 236
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG D+ + G + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG----LDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
+ACG H +AL E + SWG N +GQLGLG + + + P++I++ P+
Sbjct: 142 IACGYYHSLALSKGSEVF--------SWGQNKHGQLGLGFELKRQSSPQLIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V G H+ +LT L + +G + GQLG VP +K L +
Sbjct: 193 T--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV------- 288
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 --FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLGTGKTIDF 355
++WG G LG T ++
Sbjct: 106 YAWGLDTDGQLGLPGTEEY 124
>gi|432092257|gb|ELK24881.1| Putative E3 ubiquitin-protein ligase HERC1 [Myotis davidii]
Length = 4856
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 120/452 (26%), Positives = 184/452 (40%), Gaps = 81/452 (17%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLSLTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG--------AEERDEKLSS-------AMEEMKLLQS 411
T+ K GLD + G A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDGIAIQQVSAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSHL 761
Query: 412 KLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRSK 465
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 762 R-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATSI 814
Query: 466 LVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 815 LGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 126/284 (44%), Gaps = 37/284 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4080 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4136
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF------NQDSPWAVYEVTC 197
S G+ +++G + G+LGLG+ ++ P+ + + + V C
Sbjct: 4137 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQARNKSIICSVAC 4188
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
G HT ++ SM W FG G+ G+LG G + + P++V L + + V
Sbjct: 4189 GLNHTLAVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVA 4240
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG + ++ G V+++G ++ +GL P RN P+L G +D
Sbjct: 4241 CGTQFSVALTKDGQVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVLA------GVVIED-- 4290
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA GA HT+ +T G +++WG G LG G T P +V
Sbjct: 4291 -VAVGAEHTLALTSTG-DIYAWGSNSEGQLGLGHTNHVREPTLV 4332
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 4234 IGIKKVACGTQFSVALTKDGQVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLAGVV 4287
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4288 IEDVAVGAEHTLALTSTGDIY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4339
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4340 ---VRQISAGRCHSAAWT 4354
>gi|194040610|ref|XP_001928937.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Sus
scrofa]
Length = 568
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS HVV + GE + +WG N QLG G
Sbjct: 102 STIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVF--------TWGHNAYSQLGNGTT 153
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 154 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 203
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V G+V+ WG N L
Sbjct: 204 GSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 257
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ +P I+ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 258 SGGNQPTPCRIA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 311
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 312 SNQSYPTPVI 321
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 171 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 222
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G+ + P ++ L
Sbjct: 223 --TVVNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSGGNQPTPCRIAAL- 271
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 272 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVIVE 323
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S L T
Sbjct: 324 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFAC 376
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 377 FATPAVTWRLLSVE 390
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 96/250 (38%), Gaps = 43/250 (17%)
Query: 34 QLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
QLG +N LVPC I L+ ++ V G SL + + G
Sbjct: 147 QLGNGTTNHGLVPCHISTNLS-----------------NKQVIEVACGSYHSLVLTSDGE 189
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG +S G S + P V TVV +ACG +A+V GE
Sbjct: 190 VFAWG---YNNSGQVGSGSTANQPIPRRVTGCLQNKTVVNIACGQMCSMAVVDTGEV--- 243
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y WG N NGQLGLG ++ P I V V CG HT +LT
Sbjct: 244 -----YVWGYNGNGQLGLGSGGNQPTPCRIAALQ---GIRVQRVACGYAHTLVLTD---- 291
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAG 270
E + +G GQLG G + P V + ++ C HTS + G
Sbjct: 292 ----EGQVYAWGANSYGQLGTGNKSNQSYPTPVIVEKDRIIEIAA-CHSAHTSAAKTQGG 346
Query: 271 DVWSWGMEKG 280
V+ WG +G
Sbjct: 347 HVYMWGQCRG 356
>gi|310817521|ref|YP_003949879.1| regulator of chromosome condensation, rcc1 [Stigmatella aurantiaca
DW4/3-1]
gi|309390593|gb|ADO68052.1| Regulator of chromosome condensation, RCC1 [Stigmatella aurantiaca
DW4/3-1]
Length = 860
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/311 (27%), Positives = 131/311 (42%), Gaps = 49/311 (15%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T+ K P+++ +V+AG S+A+ G +W+WGN D G ++
Sbjct: 593 LGDGTVTSRKTPVQVSGLSAMRAVEAGPAHSVAVHLNGTVWVWGNN---DFGQLGDGTVT 649
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V G V VA G H +AL D ++WG NN GQLG G
Sbjct: 650 SRAMPVQVSGLTG--VTAVAVGVYHSLALR--------NDGTLWAWGYNNVGQLGNGTSG 699
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P + V + G+ H+ L + W +G GQLG G
Sbjct: 700 IQSTPAQVPGLT-----GVIALAAGNGHSLAL--------RTDGTVWGWGANSFGQLGDG 746
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT P QV P +++++ G F+T + S VW WG K G + ++T+
Sbjct: 747 TTTPRSTPTQV---PGLTNVIALNAGAFYTVALRSERSVWEWG-SKSAGQLGDGTVTQK- 801
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+P+ +SG D +A G AH + + D +W+WG + G +G G
Sbjct: 802 ----TTPVQVSG-------LTDVTALAAGNAHALALRTD-RTVWAWGGNQRGQIGDGTAS 849
Query: 354 DFFAPAIVLWP 364
AP V +P
Sbjct: 850 IMPAPVNVSFP 860
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 126/307 (41%), Gaps = 50/307 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVK 131
I ++ AG SLA+ G++W WG S+ G ++ + G T +
Sbjct: 512 SISALAAGDSHSLALRGNGSVWTWG------SNAYGQLGDGTAIDRATAAQVPGLTDITA 565
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G+ H +AL D + WG+N+ GQLG G SR P + + A
Sbjct: 566 LAAGNHHSLALR--------NDGTVWVWGSNDFGQLGDGTVTSRKTPVQVSGLS-----A 612
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ V G H+ + L W +G + GQLG GT S +P QV L
Sbjct: 613 MRAVEAGPAHSVAV--------HLNGTVWVWGNNDFGQLGDGTVTSRAMPVQVSGL---T 661
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ +V G++H+ + + G +W+WG +G N + +G +P + P
Sbjct: 662 GVTAVAVGVYHSLALRNDGTLWAWGYNN-VGQLGNGT-----SGIQSTPAQV-------P 708
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
+ +A G H++ + DG +W WG G LG G T P V P LT
Sbjct: 709 GLTGVIALAAGNGHSLALRTDG-TVWGWGANSFGQLGDGTTTPRSTPTQV--PGLTNVIA 765
Query: 372 QDELNTG 378
LN G
Sbjct: 766 ---LNAG 769
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 84/324 (25%), Positives = 130/324 (40%), Gaps = 60/324 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P+++ ++ AG SLA+ + G +W WGN +SS + G
Sbjct: 284 LGDGTTTERATPVQVLGLTSVTALAAGAFHSLALRDDGTVWAWGN----NSSGQLGDGTT 339
Query: 114 SSFTPSPVWDFHGHTVVKVACGS---------EHVVALVSAGETYKGEDLVCYSWGANNN 164
++ P+PV +V+ VA G +H +AL S D ++WG N +
Sbjct: 340 TAR-PTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKS--------DGTVWAWGYNLS 390
Query: 165 GQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 224
Q G G +R P + + + G H +L + W +G
Sbjct: 391 RQFGDGMPATRTTPVQVSELTGGT-----ALVAGDLHAVVLKS--------DGTVWAWGD 437
Query: 225 GENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLC 284
+GQLG G T P QV L L + D H+ V S G +W+WG + L
Sbjct: 438 NSSGQLGEGVTPVRAKPMQVSGLAAITALATGDG---HSVAVGSDGGIWAWGDNRRGQLG 494
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ TR P+ +G +A G +H++ + +G +W+WG
Sbjct: 495 IGITATREI------PVQATG-------LASISALAAGDSHSLALRGNG-SVWTWGSNAY 540
Query: 345 GVLGTGKTIDFFAPAIVLWPPLTE 368
G LG G ID A V P LT+
Sbjct: 541 GQLGDGTAIDRATAAQV--PGLTD 562
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 118/305 (38%), Gaps = 44/305 (14%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + + T+ P+++ +V A SLA+ + G +W WG+ G +
Sbjct: 176 LGNGTATDRATPVQVPGLTSVMAVAASEAHSLALRSDGTVWAWGDNGY---GQLGDGTKA 232
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP V G V +A G +SA D ++WG N+ GQLG G
Sbjct: 233 QRTTPVQVLGLAG--VTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTT 290
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P + +V + G+FH+ L + W +G +GQLG G
Sbjct: 291 ERATPVQVLGLT-----SVTALAAGAFHSLALRD--------DGTVWAWGNNSSGQLGDG 337
Query: 234 TTQSALVPEQVKELPQYVYLV------SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
TT + P QV L + + S+ H+ + S G VW+WG
Sbjct: 338 TTTARPTPVQVPGLTSVIAVAAGGGDDSLGMRGDHSLALKSDGTVWAWGYNLSRQFGDGM 397
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
TR +P+ +S + + G H V++ DG +W+WG SG L
Sbjct: 398 PATRT------TPVQVS-------ELTGGTALVAGDLHAVVLKSDG-TVWAWGDNSSGQL 443
Query: 348 GTGKT 352
G G T
Sbjct: 444 GEGVT 448
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 105/283 (37%), Gaps = 55/283 (19%)
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
F+L ++ P+P V+ +H +AL D ++WG N +GQLG
Sbjct: 137 FTLTANACPAP----------AVSAAGDHTLALR--------RDGTVWAWGFNGSGQLGN 178
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G R P + +V V H+ L + W +G GQ
Sbjct: 179 GTATDRATPVQVPGLT-----SVMAVAASEAHSLALRS--------DGTVWAWGDNGYGQ 225
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGL-----FHTSVVSSAGDVWSWGMEKGLGLC 284
LG GT P QV L L + G H+ + S G VW+WG L
Sbjct: 226 LGDGTKAQRTTPVQVLGLAGVTALAAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLG 285
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ R +P+ + G +A GA H++ + DDG +W+WG S
Sbjct: 286 DGTTTER------ATPVQVLG-------LTSVTALAAGAFHSLALRDDG-TVWAWGNNSS 331
Query: 345 GVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTK 387
G LG G T P V P LT + GG DD + +
Sbjct: 332 GQLGDGTTTARPTPVQV--PGLTSVIA---VAAGGGDDSLGMR 369
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 99/274 (36%), Gaps = 44/274 (16%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
+V A G +LA+ G +W WG S G + TP V +V+ VA
Sbjct: 148 AVSAAGDHTLALRRDGTVWAWG---FNGSGQLGNGTATDRATPVQVPGL--TSVMAVAAS 202
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H +AL S D ++WG N GQLG G + R P + V +
Sbjct: 203 EAHSLALRS--------DGTVWAWGDNGYGQLGDGTKAQRTTPVQVLGLA-----GVTAL 249
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
G T + + W +G GQLG GTT P QV L L
Sbjct: 250 AAGGNGTTVAISAHSLALRSDGTVWAWGDNSAGQLGDGTTTERATPVQVLGLTSVTALA- 308
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
G FH+ + G VW+WG L + R +P+ + P
Sbjct: 309 --AGAFHSLALRDDGTVWAWGNNSSGQLGDGTTTARP------TPVQV-------PGLTS 353
Query: 316 PVQVACGAA---------HTVLVTDDGYKLWSWG 340
+ VA G H++ + DG +W+WG
Sbjct: 354 VIAVAAGGGDDSLGMRGDHSLALKSDG-TVWAWG 386
>gi|148700108|gb|EDL32055.1| hect domain and RLD 4, isoform CRA_e [Mus musculus]
Length = 928
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPE-QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|356568831|ref|XP_003552611.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Glycine max]
Length = 474
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 102/350 (29%), Positives = 153/350 (43%), Gaps = 76/350 (21%)
Query: 51 FLTIGAPD--SLEDDSKTNHKAPIKIC--------SVKAGGMMSLAI----DNAGA---- 92
T GA D L D ++ K P K+ SV G S I +N G
Sbjct: 81 LFTWGANDFGQLGDGTEERRKLPEKVKQLESEFVKSVSCGAHCSACIAEPHENDGTISTR 140
Query: 93 -LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK-VACGSEHVVALVSAGETY 149
LW+WG +G S P W F +T+++ V+CG+ HVVAL
Sbjct: 141 RLWVWGQ-------NQG------SNLPRLFWGAFKPNTIIREVSCGAVHVVAL------- 180
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKII----ETFNQDSPWAV--YEVTCGSFHTA 203
E+ + +WG N GQLG G L+ I F ++P V +V+CG +HTA
Sbjct: 181 -SEEGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELVKIAKVSCGEYHTA 239
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ---SALVPEQVKELPQYVYLVSVDCGL 260
+++ + +T+GLG GQLGH + Q L+P +V L +++ V CG
Sbjct: 240 VISDKGE--------VYTWGLGNMGQLGHSSLQYGDKELLPRRVVTLDG-IFIKDVACGG 290
Query: 261 FHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAIS-----PILISGNGPHGPKF 313
HT V+ G +++WG + LGL P L A D+ + P+L+ P G +
Sbjct: 291 VHTCSVTQGGALYAWGGGRSGQLGLGPQTGLFSCVANDSQTFFRNIPVLVV---PKGVQL 347
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
VACG +HT++ DG ++ WG G K + P+ + W
Sbjct: 348 -----VACGYSHTLISMSDG-RIHGWGYNNYGQAANEKCTYAWYPSPIDW 391
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 121/286 (42%), Gaps = 83/286 (29%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF----- 184
+ VACG EH A+ S G + +WGAN+ GQLG G E R P+ ++
Sbjct: 63 LDVACGREHTAAIASDGSLF--------TWGANDFGQLGDGTEERRKLPEKVKQLESEFV 114
Query: 185 ---------------------------------NQDSP-----WAVY-------EVTCGS 199
NQ S W + EV+CG+
Sbjct: 115 KSVSCGAHCSACIAEPHENDGTISTRRLWVWGQNQGSNLPRLFWGAFKPNTIIREVSCGA 174
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT----QSALV----PEQVKELPQYV 251
H L+ E + +G E GQLG G T Q A + + + E P+ V
Sbjct: 175 VHVVALSE--------EGLLQAWGYNEYGQLGRGVTCEGLQGACIISSYAKFLDEAPELV 226
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG +HT+V+S G+V++WG+ +G ++SL + + + +++ +G
Sbjct: 227 KIAKVSCGEYHTAVISDKGEVYTWGLGN-MGQLGHSSLQYGDK-ELLPRRVVTLDGIF-- 282
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+D VACG HT VT G L++WG GRSG LG G F+
Sbjct: 283 -IKD---VACGGVHTCSVTQGG-ALYAWGGGRSGQLGLGPQTGLFS 323
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 102/222 (45%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKII--ETF----NQDSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ G +E +LR PK + E F ++ W +V CG HTA +
Sbjct: 22 YVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNARW--LDVACGREHTAAIAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G + GQLG GT + +PE+VK+L + ++ SV CG ++ ++
Sbjct: 78 ------DGSLFTWGANDFGQLGDGTEERRKLPEKVKQL-ESEFVKSVSCGAHCSACIAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G ++L R G A P I +V+
Sbjct: 131 HENDGTISTRRLWVWGQNQG------SNLPRLFWG-AFKPNTI------------IREVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H V ++++G L +WG G LG G T + A ++
Sbjct: 172 CGAVHVVALSEEGL-LQAWGYNEYGQLGRGVTCEGLQGACII 212
>gi|242074110|ref|XP_002446991.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
gi|241938174|gb|EES11319.1| hypothetical protein SORBIDRAFT_06g026493 [Sorghum bicolor]
Length = 1024
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 38/299 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHG 126
A + + +V G + A+ +G L+ WG P D + F+P G
Sbjct: 311 ASLHVKAVAYGSKHACAVTVSGELFEWGEGPHMGQLDCYANNLWFPHKLFSP-----LDG 365
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+VVK+ACG H + S+G+ Y ++G G LG GD + RPK +E
Sbjct: 366 ISVVKIACGPWHTAIITSSGQLY--------TYGDGTFGVLGHGDTQGTTRPKEVEYLKG 417
Query: 187 DSPWAVYEVTCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V V CG +HTA + ++ S +T+G + G+LGH + L+P V
Sbjct: 418 SR---VKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCV 474
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPIL 302
L Y + + V CG+ T V+S G V++ G M LG N D +
Sbjct: 475 DSLTDYDF-IQVSCGMALTVVLSITGVVFTIGSSMHGQLG---------NPHADGRTVCA 524
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G K + ++ G++H ++T +G K+++WG+G+ G LG G ++ P +V
Sbjct: 525 VEGL----LKTEFVRHISSGSSHVAVLTTNG-KVFTWGKGKEGQLGLGDYLNRSTPTLV 578
Score = 45.1 bits (105), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 56/238 (23%), Positives = 95/238 (39%), Gaps = 57/238 (23%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG H + GE Y SWG ++G +G RPK++E+ +
Sbjct: 263 VQSIACGETHAAIITKQGEVY--------SWGNESSGGIGNQVNIKVSRPKLVESV---A 311
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN-GQLGHGTTQSALVPEQVKEL 247
V V GS H +T + + +G G + GQL + P ++
Sbjct: 312 SLHVKAVAYGSKHACAVT--------VSGELFEWGEGPHMGQLD-CYANNLWFPHKLFSP 362
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN- 306
+ +V + CG +HT++++S+G ++++ GD +L G+
Sbjct: 363 LDGISVVKIACGPWHTAIITSSGQLYTY-------------------GDGTFGVLGHGDT 403
Query: 307 -GPHGPKFQDPVQ------VACGAAHTVLVTD---------DGYKLWSWGRGRSGVLG 348
G PK + ++ VACG HT + + KL++WG G LG
Sbjct: 404 QGTTRPKEVEYLKGSRVKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLG 461
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 52/244 (21%), Positives = 92/244 (37%), Gaps = 59/244 (24%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I + + G + I ++G L+ +G+ L T+G + P V G
Sbjct: 366 ISVVKIACGPWHTAIITSSGQLYTYGDGTFGVLGHGDTQG------TTRPKEVEYLKGSR 419
Query: 129 VVKVACGSEHVVALVSAGETYKGED--LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V VACG H A+V +K ++WG + G+LG D++ +L P +++
Sbjct: 420 VKCVACGPWHTAAIVEVLSDFKSNSPRSKLFTWGDADRGKLGHADKKMKLIPTCVDSL-- 477
Query: 187 DSPWAVYEVTCGSFHTALLT--------------HRKRPNDMLESMC------------- 219
+ + +V+CG T +L+ P+ ++C
Sbjct: 478 -TDYDFIQVSCGMALTVVLSITGVVFTIGSSMHGQLGNPHADGRTVCAVEGLLKTEFVRH 536
Query: 220 -----------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T+G G+ GQLG G + P V L + + S+ CG +
Sbjct: 537 ISSGSSHVAVLTTNGKVFTWGKGKEGQLGLGDYLNRSTPTLVDAL-EGRQVESISCGYNY 595
Query: 263 TSVV 266
T+ V
Sbjct: 596 TAAV 599
>gi|395501384|ref|XP_003755075.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Sarcophilus harrisii]
Length = 1049
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 117/276 (42%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ E+++ + P +++ + I+I + G SLA+
Sbjct: 113 DGQLGLPGT--------EEYIRV--PRNIKSLTD------IQIVQIACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG GF L +P + G +VA G H L +G
Sbjct: 157 EVFSWGQN--KHGQLGLGFELKRQSSPQLIKSLLGIPFTQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRFVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG GT + VP +K L + +V + CG +H+ +S +V+S
Sbjct: 104 QVYAW--GLDTDGQLGLPGTEEYIRVPRNIKSLTD-IQIVQIACGYYHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L L R + I +L G F QVA G AH+ ++T G
Sbjct: 161 WGQNKHGQLGLGFELKRQSSPQLIKSLL-------GIPF---TQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D F P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRFVPNLL 236
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG D+ + G + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG----LDTDGQLGLPGTEEYIRVPRNIKSLTDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
+ACG H +AL E + SWG N +GQLGLG + + + P++I++ P+
Sbjct: 142 IACGYYHSLALSKGSEVF--------SWGQNKHGQLGLGFELKRQSSPQLIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V G H+ +LT L + +G + GQLG VP +K L +
Sbjct: 193 T--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRFVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 242 QKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV------- 288
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 --FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 59/139 (42%), Gaps = 17/139 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLGTGKTIDF 355
++WG G LG T ++
Sbjct: 106 YAWGLDTDGQLGLPGTEEY 124
>gi|40018552|ref|NP_954515.1| RCC1 and BTB domain-containing protein 2 [Rattus norvegicus]
gi|81885332|sp|Q6P798.1|RCBT2_RAT RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|38197422|gb|AAH61766.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Rattus norvegicus]
gi|149049940|gb|EDM02264.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Rattus norvegicus]
Length = 551
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++S+ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVMSIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G +++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSVILPHLTHFCCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVTWRLLSVE 373
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ S+ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMSIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 300
>gi|281202576|gb|EFA76778.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 2305
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 140/311 (45%), Gaps = 49/311 (15%)
Query: 59 SLEDDSK-TNHKAP----IKICSVKAGGMMSLAIDNAGALWMWGNCPL--PDSSTEGGFS 111
S+E DS+ T + P ICS+ G S A+ G ++MWG + P +T G +
Sbjct: 559 SVEKDSQPTPERLPNFNISDICSISCGSYYSAALTENGDVYMWGRGSVKNPPIATLGNGT 618
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
P V +V ++ G H A+ S GE +WG +GQLG GD
Sbjct: 619 FDDQLLPQKVESL--QEIVVISIGFYHSAAVKSNGE--------LLTWGCGEDGQLGHGD 668
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
++ PK++++ S W V +V CG HT LT + +T+G E GQLG
Sbjct: 669 VFNQPIPKVVQSIT--SHW-VTQVQCGEKHTICLTKNGK--------VFTWGTSEYGQLG 717
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G TQ P V L +Y +++ + CG H +V+++ +V +G +G
Sbjct: 718 LGDTQKNCTPMLVTSLDKY-HIIQIACGATHNAVLTNNREVLVFGNGAAMG--------- 767
Query: 292 NEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + IS PI++ K + +++CG T +T+ G +++WG G+ LG G
Sbjct: 768 --SANIISIPIMVP-----SLKIMNIERLSCGHYSTAALTECG-DVYTWGSGQE--LGHG 817
Query: 351 KTIDFFAPAIV 361
P +V
Sbjct: 818 HGTSEAHPKLV 828
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 41/276 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G S A+ + G L WG C + G + + P V H V +V
Sbjct: 633 EIVVISIGFYHSAAVKSNGELLTWG-CG--EDGQLGHGDVFNQPIPKVVQSITSHWVTQV 689
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CG +H + L G+ ++WG + GQLGLGD + P ++ + ++ + +
Sbjct: 690 QCGEKHTICLTKNGK--------VFTWGTSEYGQLGLGDTQKNCTPMLVTSLDK---YHI 738
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ CG+ H A+LT+ + FG G G+ +P V L + +
Sbjct: 739 IQIACGATHNAVLTNNRE--------VLVFGNGA----AMGSANIISIPIMVPSL-KIMN 785
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ + CG + T+ ++ GDV++WG + LG S EA + L +
Sbjct: 786 IERLSCGHYSTAALTECGDVYTWGSGQELGHGHGTS----EAHPKLVETL---------R 832
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
Q Q++CG H +TD G K+++ G+ G LG
Sbjct: 833 NQSIRQISCGGRHMAFLTDSG-KIYTSGKDPFGQLG 867
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 65/143 (45%), Gaps = 12/143 (8%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSSAGDVWSWGME 278
T+G G +LG + + P + LP + + S+ CG ++++ ++ GDV+ WG
Sbjct: 546 TWGSGSYCKLGFKSVEKDSQPTP-ERLPNFNISDICSISCGSYYSAALTENGDVYMWG-R 603
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ P A+L D + P + Q+ V ++ G H+ V +G +L +
Sbjct: 604 GSVKNPPIATLGNGTFDDQLLPQKVES-------LQEIVVISIGFYHSAAVKSNG-ELLT 655
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G G LG G + P +V
Sbjct: 656 WGCGEDGQLGHGDVFNQPIPKVV 678
>gi|340729980|ref|XP_003403270.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Bombus
terrestris]
Length = 1104
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 54/296 (18%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKVACG 135
G ++A++ G L+ WG S++EG L S +P V +V++ACG
Sbjct: 140 GAYHTIAVNEWGQLFSWG------SNSEGQLGLNSKNFMECSPRMVKTLGTSIIVQIACG 193
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYE 194
+H +AL + GE YSWG+N+ GQLGLG D ++PK+I T P A
Sbjct: 194 MKHALALTNNGE--------LYSWGSNSEGQLGLGVDIRCEMKPKLINTL-AGVPIAF-- 242
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVY 252
+ CG +H+ ++ FG G+N GQLG TQ+ +P Q++ L +
Sbjct: 243 IACGGYHSIAISKSGA----------IFGWGKNTFGQLGLNDTQNRNLPYQLQTL-RNAK 291
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ CG + ++ G V++ G + G G N L R S +
Sbjct: 292 VCYAACGEEFSVFLTVDGGVFTCGAGMYGQLGHGSNNNEILPRQVMELMGSTV------- 344
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG HT+ + ++++WG G +G LG T P +V P
Sbjct: 345 --------TQISCGKRHTLALVPSQGRVYAWGLGGAGQLGNNSTRSTTTPQVVRGP 392
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 97/207 (46%), Gaps = 31/207 (14%)
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHR 208
K ED+ C WG +G+LGLG E + E F + S + ++ CG +T ++TH
Sbjct: 45 KKEDMFC--WGNTRHGELGLGGIEDEIILVPCEVDFKKAS--EIQQIACGENYTVVITH- 99
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ ++ G + GQLGH + L + + L +V+ + CG +HT V+
Sbjct: 100 -------DGKIYSCGNNDYGQLGHEQGRKRL--QLILGLDAFVFKKAA-CGAYHTIAVNE 149
Query: 269 AGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
G ++SWG E LGL + SP ++ G VQ+ACG H
Sbjct: 150 WGQLFSWGSNSEGQLGLNSKNFM-------ECSPRMVKTLGT-----SIIVQIACGMKHA 197
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ +T++G +L+SWG G LG G I
Sbjct: 198 LALTNNG-ELYSWGSNSEGQLGLGVDI 223
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNA 90
+G+L GSNS E L +G E K N A + I + GG S+AI +
Sbjct: 203 NGELYSWGSNS------EGQLGLGVDIRCEMKPKLINTLAGVPIAFIACGGYHSIAISKS 256
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
GA++ WG +T G L + P + V ACG E V L G
Sbjct: 257 GAIFGWG------KNTFGQLGLNDTQNRNLPYQLQTLRNAKVCYAACGEEFSVFLTVDGG 310
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT-ALLT 206
++ GA GQLG G + + P+ + + V +++CG HT AL+
Sbjct: 311 V--------FTCGAGMYGQLGHGSNNNEILPRQVMELMGST---VTQISCGKRHTLALVP 359
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ R + +GLG GQLG+ +T+S P+ V+
Sbjct: 360 SQGR--------VYAWGLGGAGQLGNNSTRSTTTPQVVR 390
>gi|219847607|ref|YP_002462040.1| chromosome condensation regulator RCC1 [Chloroflexus aggregans DSM
9485]
gi|219541866|gb|ACL23604.1| regulator of chromosome condensation RCC1 [Chloroflexus aggregans
DSM 9485]
Length = 776
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/311 (29%), Positives = 128/311 (41%), Gaps = 50/311 (16%)
Query: 60 LEDDSKTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D S T+ P+ + ++ AGG+ + A+ +G + WG + S + G L
Sbjct: 238 LGDGSYTDSSTPVAVSGLPSGVTAIAAGGVHTCALTGSGGVRCWG----ANYSGQLGNGL 293
Query: 113 V-SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
TP V V +A G H AL +G + WG N +GQLG G
Sbjct: 294 TFGRSTPGAVSGLP-SGVTAIAAGDYHTCALTGSGGVW--------CWGGNYSGQLGDGT 344
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+R P + P V + G +HT L CW G + GQLG
Sbjct: 345 TTARSTPVAVSGL----PSGVETIAAGDYHTCALMSSG------GVRCW--GHNDRGQLG 392
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GTT + P V LP V ++ G HT +S+G VW WG + G + S T
Sbjct: 393 DGTTTARSTPVAVSGLPSGVTAIAA--GRLHTCARTSSGGVWCWG-DNSDGQLGDGSFT- 448
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
D+ +P+ +SG V+ +A G HT +T G +W WGR SG LG G
Sbjct: 449 ----DSSTPVAVSG-------LASGVETIAAGGWHTCALTGSG-GVWCWGRNNSGQLGDG 496
Query: 351 KTIDFFAPAIV 361
TI P V
Sbjct: 497 STIYHITPVAV 507
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 122/297 (41%), Gaps = 40/297 (13%)
Query: 66 TNHKAPIK-ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF 124
T+ +P++ + ++ AGG + A ++G +W WG D G S S TP V
Sbjct: 46 TSSFSPLQGVTAIAAGGGHTCARTSSGGVWCWGG---NDFGRLGDGSYTDSSTPVAVSGL 102
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
V +A G H AL S+GE + WG+N GQLG G +R P +
Sbjct: 103 P-SGVTAIAAGGAHTCALTSSGEVW--------CWGSNFYGQLGDGSYTTRSTPVAVSGL 153
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
P V + G +HT T W +G GQLG GTT P V
Sbjct: 154 ----PSGVTAIAAGGWHTCARTS--------SGGVWCWGGNYRGQLGDGTTTDRSTPVAV 201
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
LP V ++ G HT S+G+VW WG G + S T D+ +P+ +S
Sbjct: 202 SGLPSEVTAIAA--GDAHTCARMSSGEVWCWGGNN-YGQLGDGSYT-----DSSTPVAVS 253
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G P G +A G HT +T G + WG SG LG G T P V
Sbjct: 254 GL-PSGVT-----AIAAGGVHTCALTGSG-GVRCWGANYSGQLGNGLTFGRSTPGAV 303
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 87/309 (28%), Positives = 122/309 (39%), Gaps = 47/309 (15%)
Query: 60 LEDDSKTNHKAPIKIC-------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D S T+ P+ + ++ AGG + A+ +G +W WG +S G S
Sbjct: 442 LGDGSFTDSSTPVAVSGLASGVETIAAGGWHTCALTGSGGVWCWGR---NNSGQLGDGST 498
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ TP V V +A G H AL +G + WG N GQLG G
Sbjct: 499 IYHITPVAVSGLP-SGVTAIAAGGVHTCALTGSGGVW--------CWGGNFAGQLGDGTT 549
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R P + P V + G HT LT W +G + GQLG
Sbjct: 550 TDRSTPVAVSGL----PSGVTAIAAGDIHTCALTG--------SGGVWCWGGNDFGQLGD 597
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT + P V LP V ++ GL +T ++ +G VW WG G + + +R+
Sbjct: 598 GTTTNRSTPVAVSGLPSGVTAIAA--GLRYTCALTGSGGVWCWGYNL-SGQLDDGTTSRS 654
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+P+ +SG P G +A G +T T G + WG SG LG G T
Sbjct: 655 ------TPVAVSGL-PSGVT-----AIAAGGWYTCARTSSG-GVRCWGANGSGQLGDGTT 701
Query: 353 IDFFAPAIV 361
P V
Sbjct: 702 TKRSTPVAV 710
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 88/224 (39%), Gaps = 34/224 (15%)
Query: 60 LEDDSKTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D + T+ P+ + ++ AG + + A+ +G +W WG D G +
Sbjct: 544 LGDGTTTDRSTPVAVSGLPSGVTAIAAGDIHTCALTGSGGVWCWGG---NDFGQLGDGTT 600
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ TP V V +A G + AL +G + WG N +GQL G
Sbjct: 601 TNRSTPVAVSGLP-SGVTAIAAGLRYTCALTGSGGVW--------CWGYNLSGQLDDG-T 650
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
SR P + P V + G ++T T CW G +GQLG
Sbjct: 651 TSRSTPVAVSGL----PSGVTAIAAGGWYTCARTSSG------GVRCW--GANGSGQLGD 698
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
GTT P V LP V ++ G HT + S+G VW WG
Sbjct: 699 GTTTKRSTPVAVSGLPSGVTAIAA--GGEHTCALMSSGGVWCWG 740
>gi|32451488|ref|NP_080377.2| probable E3 ubiquitin-protein ligase HERC4 isoform 2 [Mus musculus]
gi|29144941|gb|AAH43082.1| Hect domain and RLD 4 [Mus musculus]
gi|74188723|dbj|BAE28095.1| unnamed protein product [Mus musculus]
gi|148700106|gb|EDL32053.1| hect domain and RLD 4, isoform CRA_c [Mus musculus]
Length = 1049
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|281209109|gb|EFA83284.1| regulator of chromosome condensation domain-containing protein
[Polysphondylium pallidum PN500]
Length = 853
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 118/248 (47%), Gaps = 31/248 (12%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+V ++ G + A+ S G Y+WG N GQLGLGDR P++I + + S
Sbjct: 232 IVDISAGWAYSAAVTSTGN--------VYTWGFNEKGQLGLGDRWYHGNPRVIRSLSNKS 283
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ + CG H A ++ + D+ +T+GLG GQLGHG +S L P++V
Sbjct: 284 ---IVNIACGRQHMAAIS---KSGDL-----YTWGLGVFGQLGHGKLKSLLHPKKVLYFE 332
Query: 249 QYV-YLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNAS-LTRNEAGDAISPILIS 304
Q +V V G T VS G+++S+G E G LG + + N GD + S
Sbjct: 333 QQQKKIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYS 392
Query: 305 GNGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P K + V +VACG HT+ VT D +++WG G SG LG G P V
Sbjct: 393 --LPKQVKALESVKVRKVACGHLHTIAVTTDN-DVYTWGWGSSGCLGFGDRKFQLVPQRV 449
Query: 362 LWPPLTEE 369
P L+ E
Sbjct: 450 --PSLSGE 455
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 99/223 (44%), Gaps = 42/223 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHT 128
IKI + AG S A+ + G ++ WG + +G L + P + +
Sbjct: 230 IKIVDISAGWAYSAAVTSTGNVYTWG------FNEKGQLGLGDRWYHGNPRVIRSLSNKS 283
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+V +ACG +H+ A+ +G+ Y+WG GQLG G +S L PK + F Q
Sbjct: 284 IVNIACGRQHMAAISKSGD--------LYTWGLGVFGQLGHGKLKSLLHPKKVLYFEQQQ 335
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG------------HGTTQ 236
V T +F A+ + + ++FG GE GQLG +G
Sbjct: 336 KKIVQVATGANFTMAVSENGE---------LFSFGHGEYGQLGATEDTQYMDWNNNGDRD 386
Query: 237 SAL---VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
L +P+QVK L + V + V CG HT V++ DV++WG
Sbjct: 387 DHLKYSLPKQVKAL-ESVKVRKVACGHLHTIAVTTDNDVYTWG 428
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/318 (22%), Positives = 126/318 (39%), Gaps = 49/318 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I + G SLA+ G ++ WG G + P+ + +VKV
Sbjct: 35 RIKQIACGEAHSLAVTEFGDVYSWGRGK---EGELGHPQKAMTAPPALIKALEHERIVKV 91
Query: 133 ACGSEHVVALVSAGETYK-GE--DLVCYSWGANNNGQL----GLGDRESRLRPKIIETFN 185
ACG+ H +AL G+ Y+ G+ ++ G + G L G+ S++ + +
Sbjct: 92 ACGNYHSLALTDTGKVYQWGQLHEIDATKSGVKSQGGLVEMTGIKSFASKVADHSLSMYL 151
Query: 186 QDSPWAVYEVTCGS-------FHTALLTHRKR------PNDMLESMCWTFGLGENGQLGH 232
A E + S L+T + P ++++ ++G
Sbjct: 152 NGEKAAYDEESASSSVLQDNPTANGLVTDDQEEEEEFLPEAIVDTQQEQQPEKSGSKVGE 211
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCP----- 285
++ + P V + + +V + G +++ V+S G+V++WG EKG LGL
Sbjct: 212 IVDKNQMTPVLVDFGSKSIKIVDISAGWAYSAAVTSTGNVYTWGFNEKGQLGLGDRWYHG 271
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N + R+ + +I V +ACG H ++ G L++WG G G
Sbjct: 272 NPRVIRSLSNKSI------------------VNIACGRQHMAAISKSG-DLYTWGLGVFG 312
Query: 346 VLGTGKTIDFFAPAIVLW 363
LG GK P VL+
Sbjct: 313 QLGHGKLKSLLHPKKVLY 330
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 87/210 (41%), Gaps = 34/210 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH--TVVK 131
I ++ G AI +G L+ WG L G L S P V F +V+
Sbjct: 284 IVNIACGRQHMAAISKSGDLYTWG---LGVFGQLGHGKLKSLLHPKKVLYFEQQQKKIVQ 340
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------------GDRESRLRPK 179
VA G+ +A+ GE +S+G GQLG GDR+ L+
Sbjct: 341 VATGANFTMAVSENGE--------LFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYS 392
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ + V +V CG HT +T ND+ +T+G G +G LG G + L
Sbjct: 393 LPKQVKALESVKVRKVACGHLHTIAVT---TDNDV-----YTWGWGSSGCLGFGDRKFQL 444
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
VP++V L + SV G HT +V S+
Sbjct: 445 VPQRVPSLSGE-EISSVSGGEKHTLIVRSS 473
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 66/141 (46%), Gaps = 19/141 (13%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
+FG+G+ GQLG + L P V +L + + + CG H+ V+ GDV+SWG K
Sbjct: 5 SFGVGKQGQLGLDVNKDQLDPA-VIQLLKGKRIKQIACGEAHSLAVTEFGDVYSWGRGK- 62
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L + P LI + + V+VACG H++ +TD G K++ WG
Sbjct: 63 -----EGELGHPQKAMTAPPALIK-----ALEHERIVKVACGNYHSLALTDTG-KVYQWG 111
Query: 341 R------GRSGVLGTGKTIDF 355
+ +SGV G ++
Sbjct: 112 QLHEIDATKSGVKSQGGLVEM 132
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 12/119 (10%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
S+G GQLGL + +L P +I+ + ++ CG H+ +T
Sbjct: 5 SFGVGKQGQLGLDVNKDQLDPAVIQLLKGKR---IKQIACGEAHSLAVTEFGD------- 54
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGH P +K L ++ +V V CG +H+ ++ G V+ WG
Sbjct: 55 -VYSWGRGKEGELGHPQKAMTAPPALIKAL-EHERIVKVACGNYHSLALTDTGKVYQWG 111
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 41/89 (46%), Gaps = 11/89 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ + G + ++ACG H +A+ G+ YSWG G+LG +
Sbjct: 25 PAVIQLLKGKRIKQIACGEAHSLAVTEFGD--------VYSWGRGKEGELGHPQKAMTAP 76
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLT 206
P +I+ + + +V CG++H+ LT
Sbjct: 77 PALIKALEHER---IVKVACGNYHSLALT 102
Score = 42.4 bits (98), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 23/145 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG-----------NCPLPDSSTEGGFSLVSSFT-PSP 120
KI V G ++A+ G L+ +G + D + G ++ P
Sbjct: 337 KIVQVATGANFTMAVSENGELFSFGHGEYGQLGATEDTQYMDWNNNGDRDDHLKYSLPKQ 396
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V V KVACG H +A+ + + Y+WG ++G LG GDR+ +L P+
Sbjct: 397 VKALESVKVRKVACGHLHTIAVTTDND--------VYTWGWGSSGCLGFGDRKFQLVPQR 448
Query: 181 IETFNQDSPWAVYEVTCGSFHTALL 205
+ + + + + V+ G HT ++
Sbjct: 449 VPSLSGEE---ISSVSGGEKHTLIV 470
>gi|401413264|ref|XP_003886079.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
gi|325120499|emb|CBZ56053.1| hypothetical protein NCLIV_064790 [Neospora caninum Liverpool]
Length = 1765
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 122/270 (45%), Gaps = 54/270 (20%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQ 186
+V +VA G H + + KG+ +WG N N LGLG + R+ P ++ F++
Sbjct: 47 SVKRVALGLYHTLVV-----GLKGDQPQLLAWGKNYNNVLGLGVETRERVFPGLVPFFSR 101
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ---------- 236
V+EV+CG+ ++A+L R + + +TFGLG G+LG+ ++
Sbjct: 102 H---GVFEVSCGTNNSAVLVKRAQQSG---GKVYTFGLGNRGRLGYPKSKAEGGARQQGD 155
Query: 237 ----------SALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
S P+ + + + CG HT +S G +++WG+
Sbjct: 156 DAGDGQEDGPSWFTPKPARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGS------ 209
Query: 286 NASLTRNEAGDAISPILI-----SGNGPH------GPKFQDPVQVAC---GAAHTVLVTD 331
+L + + DA SP+ + G+G G + DPV V C GA H++ T
Sbjct: 210 YGNLGQGDTSDAYSPVRVLLGSEKGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTS 269
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG LW+WG G +G LG G +PA+V
Sbjct: 270 DG-TLWTWGHGGNGRLGLGHNRGSLSPAVV 298
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 137/306 (44%), Gaps = 61/306 (19%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPV-WDFHGHTVVK 131
S+ G ++A+ GA+W+WG S+ EG L V PV D + +
Sbjct: 505 SLGCGENHTVALTGTGAVWVWG------SNDEGQLGLGEQVEEDQYEPVKLDCFSTPIRR 558
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS+H +A+ G+ + +WGAN++GQLGLG P + Q
Sbjct: 559 IACGSKHCLAVAQYGDVF--------AWGANDDGQLGLGVLRPSFEPAAVTALRQ----- 605
Query: 192 VYEVTCGSFHTALLTHRKRPNDM---LESMC-----WTFGLGENGQLGHG---TTQSALV 240
+V CG ++A +T + LES WT+G E+G+LG G + S L
Sbjct: 606 AIDVFCGDDYSACITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILT 665
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGD 296
P++V P V + + G H +++ G+ ++WG G+G N
Sbjct: 666 PQKV---PFSVPVCACSLGTSHALAITARGECYAWGAGYYGRLGIGTTAN---------- 712
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
A +P + P G + + VA GA+H++ ++ DG LW WG+ T T ++
Sbjct: 713 AYAP--TKCDFPKGVRIR---SVAAGASHSLALSMDG-DLWIWGKKED----TCSTTNYN 762
Query: 357 APAIVL 362
+P I +
Sbjct: 763 SPRIFM 768
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 92/381 (24%), Positives = 134/381 (35%), Gaps = 121/381 (31%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMW---GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
P+ + AG S+A + G LW W GN L G S +P+ V
Sbjct: 251 PVVVTCCAAGAKHSMACTSDGTLWTWGHGGNGRLGLGHNRG------SLSPAVVDYILDR 304
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV V+ G H + G V Y+WG+ G+LG GD+ P+ +E F
Sbjct: 305 DVVFVSAGDSHSACIDRQG--------VLYTWGSGGFGRLGHGDQGEIPVPRKVEGFGG- 355
Query: 188 SPWAVYEVTCGSFHTALLTHR----------------------------KRPNDMLESM- 218
V +V CG+FHT LTH+ K +D+ ++
Sbjct: 356 --VPVLQVACGTFHTLALTHKGTVFAWGAGLALGLGEGEDGGGGMVTVPKHLSDIEVAVL 413
Query: 219 -----------------CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY--------- 252
+G+G + +LGHG Q+ P+ V +L +Y
Sbjct: 414 NVAAGPYHSAAVTVGGDLLVWGVGGSSRLGHGDQQNQPFPKYVADLRNRMYVADLQSMLG 473
Query: 253 -----------------------------LVSVDCGLFHTSVVSSAGDVWSWGM--EKGL 281
L S+ CG HT ++ G VW WG E L
Sbjct: 474 VSRLRRDYSDFDVLGESAGGAGANAAAWTLQSLGCGENHTVALTGTGAVWVWGSNDEGQL 533
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWG 340
GL D P+ + F P+ ++ACG+ H + V G +++WG
Sbjct: 534 GLGEQVE------EDQYEPVKLDC-------FSTPIRRIACGSKHCLAVAQYG-DVFAWG 579
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
G LG G F PA V
Sbjct: 580 ANDDGQLGLGVLRPSFEPAAV 600
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/305 (26%), Positives = 120/305 (39%), Gaps = 50/305 (16%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSP 120
++ + KI + G +LA+ + GAL+ WG L T +S V S
Sbjct: 173 ARVRFRDKCKIARISCGADHTLALSDGGALYAWGVGSYGNLGQGDTSDAYSPVRVLLGSE 232
Query: 121 VWD----------FHGHTVVKVAC---GSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G V V C G++H +A S G ++WG NG+L
Sbjct: 233 KGSGKKKENLGIGRRGTDPVVVTCCAAGAKHSMACTSDG--------TLWTWGHGGNGRL 284
Query: 168 GLGDRESRLRPKIIE-TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
GLG L P +++ ++D V V+ G H+A + + + +T+G G
Sbjct: 285 GLGHNRGSLSPAVVDYILDRD----VVFVSAGDSHSACIDR--------QGVLYTWGSGG 332
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
G+LGHG VP +V+ V ++ V CG FHT ++ G V++WG
Sbjct: 333 FGRLGHGDQGEIPVPRKVEGFGG-VPVLQVACGTFHTLALTHKGTVFAWG---------- 381
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSG 345
A L + H + V VA G H+ VT G L WG G S
Sbjct: 382 AGLALGLGEGEDGGGGMVTVPKHLSDIEVAVLNVAAGPYHSAAVTVGG-DLLVWGVGGSS 440
Query: 346 VLGTG 350
LG G
Sbjct: 441 RLGHG 445
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGN----CPLPDSSTE 107
L IG + +K + ++I SV AG SLA+ G LW+WG C + ++
Sbjct: 705 LGIGTTANAYAPTKCDFPKGVRIRSVAAGASHSLALSMDGDLWIWGKKEDTCSTTNYNSP 764
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
F + S + P V +A H +A+ GE ++WG N Q
Sbjct: 765 RIFMQLESPSGVP-------KVKSIAAAEHHSLAVTETGEV--------FAWGDNKLYQT 809
Query: 168 GLGDRES-RL-RPKIIETFNQDSPW 190
G G R++ RL RP++I W
Sbjct: 810 GCGKRQAERLDRPEMIAGLPNVCQW 834
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 120/302 (39%), Gaps = 54/302 (17%)
Query: 75 CSVKAGG--MMSLAIDNA---GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
C GG +SLA+++ G LW WG + S TP V +V
Sbjct: 618 CITSNGGAQTVSLALESGTEFGDLWTWGAAESGKLGLGEDVASGSILTPQKV----PFSV 673
Query: 130 VKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
AC G+ H +A+ + GE CY+WGA G+LG+G + P D
Sbjct: 674 PVCACSLGTSHALAITARGE--------CYAWGAGYYGRLGIGTTANAYAPT-----KCD 720
Query: 188 SPWAVY--EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQ 243
P V V G+ H+ L+ ++ W +G E+ + + + + E
Sbjct: 721 FPKGVRIRSVAAGASHSLALS--------MDGDLWIWGKKEDTCSTTNYNSPRIFMQLES 772
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
+P+ + S+ H+ V+ G+V++WG K + +A P +I
Sbjct: 773 PSGVPK---VKSIAAAEHHSLAVTETGEVFAWGDNK----LYQTGCGKRQAERLDRPEMI 825
Query: 304 SGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDFFAPAI 360
+G + Q VA G + V G ++++ G G LGTG K FAPA
Sbjct: 826 AG-------LPNVCQWVATGPQASFFVLCSG-EVYAAGVINGGRLGTGWSKRKYQFAPAA 877
Query: 361 VL 362
VL
Sbjct: 878 VL 879
>gi|74226109|dbj|BAE25272.1| unnamed protein product [Mus musculus]
Length = 1057
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|61563742|ref|NP_060382.3| probable E3 ubiquitin-protein ligase HERC6 isoform 1 [Homo sapiens]
gi|74750679|sp|Q8IVU3.2|HERC6_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC6; AltName:
Full=HECT domain and RCC1-like domain-containing protein
6
gi|48686728|gb|AAQ14893.1|AF336798_1 HERC6 [Homo sapiens]
gi|66840150|gb|AAH42047.2| Hect domain and RLD 6 [Homo sapiens]
gi|194381386|dbj|BAG58647.1| unnamed protein product [Homo sapiens]
Length = 1022
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|340505900|gb|EGR32173.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 427
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/348 (24%), Positives = 149/348 (42%), Gaps = 71/348 (20%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG + N+ +P +E S N I VKA +S+A+ G
Sbjct: 54 GQLGLANENNQY-----------SPQEVEKLSDRN------IIKVKANKSVSMALSQDGK 96
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
++ WG + G ++SF P V + +++CG H+ A+ GE
Sbjct: 97 VYTWG----KNKGGILGHYDITSFNMIQPELVEKLENIQIKQISCGPFHMAAISQDGE-- 150
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA----------------VY 193
Y+WG ++G+LG + + + I+ NQ+ +A
Sbjct: 151 ------LYTWGNKDHGKLGH-EIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCK 203
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V+CG T +LT ++FG GQLG+ + ++ Q K++P +
Sbjct: 204 QVSCGGQFTVVLTENGE--------VYSFGNSMKGQLGYQSEETGNF--QPKKIPDLQNI 253
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+++DCG ++ VSS+G V++WG L N S+ + P ++G G G K
Sbjct: 254 INIDCGQQFSAAVSSSGKVYTWGNNDHGQLGNNQSIYQ------ARPNQVTGFG--GNKI 305
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++CG ++++G KL++WG G G LG D +AP +
Sbjct: 306 ---INISCGDNFIAALSNEG-KLFTWGYGNDGQLGHSNRNDLYAPKQI 349
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 117/265 (44%), Gaps = 42/265 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK V GG ++ + G ++ +GN L S E G +F P + D
Sbjct: 200 IKCKQVSCGGQFTVVLTENGEVYSFGNSMKGQLGYQSEETG-----NFQPKKIPDLQ--N 252
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
++ + CG + A+ S+G+ Y+WG N++GQLG + RP + F +
Sbjct: 253 IINIDCGQQFSAAVSSSGK--------VYTWGNNDHGQLGNNQSIYQARPNQVTGFGGNK 304
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ ++CG A L++ E +T+G G +GQLGH P+Q++
Sbjct: 305 ---IINISCGDNFIAALSN--------EGKLFTWGYGNDGQLGHSNRNDLYAPKQIEFKE 353
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
+ ++ VDCG HT+ ++ ++ +G E LG+ N +EA +P ++
Sbjct: 354 K---IIKVDCGGTHTAFLTQNNQLYLFGRGNEGQLGIGEN---IESEAAIRTTPKIV--- 404
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD 331
K V V CG +T+ +T+
Sbjct: 405 --EFFKKMKVVDVTCGGEYTLAITE 427
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 94/209 (44%), Gaps = 34/209 (16%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
Y+WG N GQLGL + ++ P+ +E S + +V + L+
Sbjct: 44 TVYAWGYGNFGQLGLANENNQYSPQEVEKL---SDRNIIKVKANKSVSMALSQ------- 93
Query: 215 LESMCWTFGLGENGQLGHG--TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ +T+G + G LGH T+ + + PE V++L + + + + CG FH + +S G++
Sbjct: 94 -DGKVYTWGKNKGGILGHYDITSFNMIQPELVEKL-ENIQIKQISCGPFHMAAISQDGEL 151
Query: 273 WSWGMEKGLGLCPNASLTRNEA-------------GDAISPILISGNGPHGPKFQDPVQV 319
++WG + L N+ G + + S NG QV
Sbjct: 152 YTWGNKDHGKLGHEIQQKSNKVEIKRGNQNYDYAEGSMLPTKVQSLNGIKCK------QV 205
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+CG TV++T++G +++S+G G LG
Sbjct: 206 SCGGQFTVVLTENG-EVYSFGNSMKGQLG 233
>gi|312433980|ref|NP_084390.1| probable E3 ubiquitin-protein ligase HERC4 isoform 1 [Mus musculus]
gi|126215720|sp|Q6PAV2.2|HERC4_MOUSE RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
Length = 1057
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|387019663|gb|AFJ51949.1| putative E3 ubiquitin-protein ligase HERC4-like [Crotalus
adamanteus]
Length = 1052
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 116/280 (41%), Gaps = 49/280 (17%)
Query: 30 CMDGQLGFSGSN--SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI 87
+DGQLG SG+ + VP I+ SL D I+I V G SLA+
Sbjct: 111 AVDGQLGLSGTEEYTRVPRNIK---------SLSD---------IQIVQVACGYFHSLAL 152
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
++ WG G+ +P + G ++A G H L +G
Sbjct: 153 SKGSEVFSWGQNKYGQLGL--GYEYKKQASPQIIKSLLGIPFAQIAAGGAHSFVLTLSG- 209
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+ WG N GQLGL D R P ++++ S VY ++CG HTA LT
Sbjct: 210 -------AVFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ISCGEDHTAALTK 259
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-V 266
E +TFG G GQLGH +T + P +V EL + + + CG HTS V
Sbjct: 260 --------EGGVFTFGAGGYGQLGHNSTAHEINPRKVFELMGNI-VTQIACGRQHTSAFV 310
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
S G ++S+ GL N L + SP + GN
Sbjct: 311 PSTGRIYSF------GLGGNGQLGMGTTSNRKSPFPVKGN 344
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/267 (28%), Positives = 112/267 (41%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRRCSFFVNKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQLG +SR RP+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQLG--HEKSRKRPEQVGALDAQN---IVTVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W F + +GQLG GT + VP +K L + +V V CG FH+ +S +V+S
Sbjct: 104 QVYAWGFAV--DGQLGLSGTEEYTRVPRNIKSLSD-IQIVQVACGYFHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L + + I +L G F Q+A G AH+ ++T G
Sbjct: 161 WGQNKYGQLGLGYEYKKQASPQIIKSLL-------GIPF---AQIAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D + P ++
Sbjct: 210 AVFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 138/316 (43%), Gaps = 49/316 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT--PSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG + G S +T P + +V+
Sbjct: 86 IVTVSCGEAHTLALNDKGQVYAWGFA----VDGQLGLSGTEEYTRVPRNIKSLSDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
VACG H +AL E + SWG N GQLGLG + + + P+II++ P+
Sbjct: 142 VACGYFHSLALSKGSEVF--------SWGQNKYGQLGLGYEYKKQASPQIIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A ++ G H+ +LT L + +G + GQLG VP +K L +
Sbjct: 193 A--QIAAGGAHSFVLT--------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISGNG 307
+V + CG HT+ ++ G V+++G G G L N I+P + GN
Sbjct: 242 QKIVYISCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTAHEINPRKVFELMGN- 294
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL--WPP 365
Q+ACG HT +++S+G G +G LG G T + +P V W P
Sbjct: 295 -------IVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGTTSNRKSPFPVKGNWLP 347
Query: 366 LTEEFKQDELNTGGLD 381
Q LN+ G D
Sbjct: 348 YN---GQIPLNSDGED 360
>gi|149043903|gb|EDL97354.1| rCG61079, isoform CRA_c [Rattus norvegicus]
Length = 928
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG + + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIECQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---ECQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|345323388|ref|XP_001508293.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4
[Ornithorhynchus anatinus]
Length = 1006
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 85/290 (29%), Positives = 119/290 (41%), Gaps = 48/290 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ I P +++ S I+I V G SLA+
Sbjct: 62 DGQLGLPGTEE----------CIRVPRNIKSLSD------IQIVQVSCGYYHSLALSKGS 105
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG GF +P + G +++A G H L +G
Sbjct: 106 EVFSWGQNKYGQLGL--GFEFKKQTSPQLIKSLLGIPFMQIAAGGAHSFVLTLSG----- 158
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 159 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 208
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 209 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 263
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN-GPHGPKFQDPVQV 319
++S+ GL N L + SP + GN P+ QDP +
Sbjct: 264 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGNWFPYSE--QDPSNI 305
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/317 (27%), Positives = 138/317 (43%), Gaps = 55/317 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG T+G L + P + +
Sbjct: 35 IVAVSCGDAHTLALNDKGQVYAWG------LDTDGQLGLPGTEECIRVPRNIKSLSDIQI 88
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+V+CG H +AL E + SWG N GQLGLG + + + P++I++
Sbjct: 89 VQVSCGYYHSLALSKGSEVF--------SWGQNKYGQLGLGFEFKKQTSPQLIKSL-LGI 139
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 140 PFM--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 188
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 189 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 237
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL-- 362
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 238 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 293
Query: 363 WPPLTEEFKQDELNTGG 379
W P +E QD N G
Sbjct: 294 WFPYSE---QDPSNIDG 307
>gi|259089405|ref|NP_001158608.1| probable E3 ubiquitin-protein ligase HERC6 isoform 2 [Homo sapiens]
gi|55832764|gb|AAV66895.1| HERC6 splice variant [Homo sapiens]
Length = 986
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|354477676|ref|XP_003501045.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Cricetulus griseus]
Length = 1049
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 117/276 (42%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS E+++ + P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGS--------EEYIRV--PRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F V V CG H V ++ G Y+ G N+ GQ LG +SR +P+ +
Sbjct: 31 FANKKVRDVGCGLRHTVFVLDDG--------TVYTCGCNDLGQ--LGHEKSRKKPEQVVA 80
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPE 242
+ + + V+CG HT L ND + W GL +GQLG G+ + VP
Sbjct: 81 LDAQN---IVAVSCGEAHTLAL------NDKGQVYSW--GLDSDGQLGLLGSEEYIRVPR 129
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAI 298
+K L + +V V CG +H+ +S A +V+ WG K GLG+ +
Sbjct: 130 NIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI---------DCKKQT 179
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP LI G F +QVA G AH+ ++T G ++ WGR + G LG D + P
Sbjct: 180 SPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233
Query: 359 AIV 361
++
Sbjct: 234 NLL 236
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYSWG------LDSDGQLGLLGSEEYIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V+SWG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEEYIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 45.4 bits (106), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
+SWG G LG
Sbjct: 106 YSWGLDSDGQLG 117
>gi|196012989|ref|XP_002116356.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
gi|190580947|gb|EDV21026.1| hypothetical protein TRIADDRAFT_60369 [Trichoplax adhaerens]
Length = 4253
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 127/288 (44%), Gaps = 43/288 (14%)
Query: 68 HKAPIK-ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFH 125
H+ IK + S K +LAI + G ++ WG+ D G + V+ +P +
Sbjct: 464 HECKIKNLVSSKGSDGHTLAIASDGRIYSWGD---GDYGKLGHGNHVTQKSPKLILGPMQ 520
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V ++A G H A+ S G + Y+WG + G+LG GD SR P +++
Sbjct: 521 GKVVRQIAVGYRHSAAITSEG--------LLYTWGDGDYGRLGHGDNHSRSIPTLVKDIT 572
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V V+CGS T +++ + W+FG G+NG+LGHG T P+ +
Sbjct: 573 -----GVGSVSCGSSFTVVISQDA-------TTVWSFGAGDNGKLGHGDTSRVYRPKVIS 620
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Q + + V C + ++S G V+ WG LG G A + L+
Sbjct: 621 NL-QGLLIRKVCCASQSSLALTSIGQVFVWGSGPCLGY-----------GQADATFLVP- 667
Query: 306 NGPHGPKFQD--PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+FQD + +A G H + +T D ++SWG SG G G
Sbjct: 668 --KRLDEFQDLQIIDIAVGDNHCLALTCDN-DVYSWGNNASGQCGLGN 712
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 99/219 (45%), Gaps = 35/219 (15%)
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRES--RLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ G L C G + G+LG G+ + RLRP + + VT + T L
Sbjct: 3454 HDGTVLAC---GEGSYGRLGQGNSDDLPRLRPI--------TALQGFVVTELATSTGLEG 3502
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
H + E W G G+ G+LGHG ++ P Q++ L + ++ V CG H+++V
Sbjct: 3503 HSLALTETGEVFSW--GDGDYGKLGHGNSERQRRPRQIEAL-RGEDVLHVACGHKHSAIV 3559
Query: 267 SSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+ G ++++G GLG N L A+ PI++ +ACG
Sbjct: 3560 TVDGKLFTFGASDLGRLGLGNTSNKKLPAQVT--ALQPIMVE-------------LIACG 3604
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
A HTV+VT D +W++G G G LG G+T P V
Sbjct: 3605 ANHTVVVTTDRESVWTFGEGEYGQLGLGRTTAKMTPQYV 3643
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 111/295 (37%), Gaps = 84/295 (28%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
SLA+ G ++ WG+ D G + P + G V+ VACG +H
Sbjct: 3504 SLALTETGEVFSWGD---GDYGKLGHGNSERQRRPRQIEALRGEDVLHVACGHKH----- 3555
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
SA T G+ +++GA++ G+LGLG+ ++ P + P V + CG+ HT
Sbjct: 3556 SAIVTVDGK---LFTFGASDLGRLGLGNTSNKKLPAQVTALQ---PIMVELIACGANHTV 3609
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL---------------- 247
++T + WTFG GE GQLG G T + + P+ V
Sbjct: 3610 VVTTDRES-------VWTFGEGEYGQLGLGRTTAKMTPQYVDAFSKLNIKKICCGARFTL 3662
Query: 248 ------------------------------PQYVYLVS------VDCGLFHTSVVSSAGD 271
PQ V +S + G H ++ GD
Sbjct: 3663 ALTKEGKVYSCGHNRCNGIFEVDTQHADYYPQQVMALSEQFIEDIAAGYEHALALTKEGD 3722
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
VWSWG + L +L + E P LIS G + Q++ G H+
Sbjct: 3723 VWSWGNDTDGQLGLGQTLPQRE------PCLISSLQGKGIR-----QISAGHNHS 3766
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 91/202 (45%), Gaps = 27/202 (13%)
Query: 163 NNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTF 222
N G+LGLGD ++ RPK+I ++ + HT + R +++
Sbjct: 442 NYGRLGLGDSSNQNRPKLIRFEHECKIKNLVSSKGSDGHTLAIASDGR--------IYSW 493
Query: 223 GLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
G G+ G+LGHG + P+ + Q + + G H++ ++S G +++WG
Sbjct: 494 GDGDYGKLGHGNHVTQKSPKLILGPMQGKVVRQIAVGYRHSAAITSEGLLYTWG------ 547
Query: 283 LCPNASLTRNEAGDAIS---PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
+ R GD S P L+ G V+CG++ TV+++ D +WS+
Sbjct: 548 ---DGDYGRLGHGDNHSRSIPTLVKDITGVG-------SVSCGSSFTVVISQDATTVWSF 597
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 598 GAGDNGKLGHGDTSRVYRPKVI 619
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 65/142 (45%), Gaps = 25/142 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP-LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
K+C SLA+ + G +++WG+ P L + F P + +F ++
Sbjct: 629 KVC---CASQSSLALTSIGQVFVWGSGPCLGYGQADATF-----LVPKRLDEFQDLQIID 680
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPW 190
+A G H +AL + Y SWG N +GQ GLG+ S L P+ + F+
Sbjct: 681 IAVGDNHCLALTCDNDVY--------SWGNNASGQCGLGNNNSPVLLPRKVTGFDNH--- 729
Query: 191 AVYEVTCGSFH----TALLTHR 208
+Y+++ G+ H TAL T R
Sbjct: 730 VIYQISVGTSHSIAWTALPTDR 751
>gi|149043902|gb|EDL97353.1| rCG61079, isoform CRA_b [Rattus norvegicus]
Length = 1049
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG + + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIECQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---ECQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|332233496|ref|XP_003265938.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 1
[Nomascus leucogenys]
Length = 1020
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLNVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGELKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CGA HT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGAEHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG+ HTA+LT + +TFG +GQLG+ T PE K
Sbjct: 234 KNLGVVYISCGAEHTAVLTQ--------DGKVFTFGDNRSGQLGYSPT-----PE--KRG 278
Query: 248 PQYVYLV-----SVDCGLFHT-SVVSSAGDVWSWG 276
PQ V ++ VDCG +HT + V + G V S+G
Sbjct: 279 PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 63/290 (21%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGELKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTP---------------- 274
Query: 304 SGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
GP + D + QV CG+ HT+ ++ S+G G S TGK
Sbjct: 275 EKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPS---DTGK 321
>gi|148700105|gb|EDL32052.1| hect domain and RLD 4, isoform CRA_b [Mus musculus]
Length = 1066
Score = 90.1 bits (222), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 122 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 165
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 166 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 218
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 219 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 268
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 269 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 323
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 324 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 353
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 95 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 148
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 149 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 199
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 200 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 248
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 249 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 297
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 298 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 350
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 13 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 69
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 70 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 129
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 130 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 182
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 183 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 233
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 234 NDENDRYVPNLL 245
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 11 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 68
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 69 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 114
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 115 YAWGLDSDGQLG 126
>gi|332233498|ref|XP_003265939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 isoform 2
[Nomascus leucogenys]
Length = 984
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLNVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGELKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CGA HT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGAEHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/215 (29%), Positives = 93/215 (43%), Gaps = 39/215 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG+ HTA+LT + +TFG +GQLG+ T PE K
Sbjct: 234 KNLGVVYISCGAEHTAVLTQ--------DGKVFTFGDNRSGQLGYSPT-----PE--KRG 278
Query: 248 PQYVYLV-----SVDCGLFHT-SVVSSAGDVWSWG 276
PQ V ++ VDCG +HT + V + G V S+G
Sbjct: 279 PQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFG 313
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 127/290 (43%), Gaps = 63/290 (21%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGELKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGAEHTAVLTQDGKVFTFGDNRSGQLGYSPTP---------------- 274
Query: 304 SGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
GP + D + QV CG+ HT+ ++ S+G G S TGK
Sbjct: 275 EKRGPQLVEIIDGLVSQVDCGSYHTLAYVHTTGQVVSFGHGPS---DTGK 321
>gi|327277952|ref|XP_003223727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Anolis carolinensis]
Length = 1052
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 112/267 (41%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F TV V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQLG +SR RP+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQLG--HEKSRKRPEQVGALDAQN---IVAVSCGEAHTLTL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W G +GQLG GT + VP +K L V +V V CG +H+ +S +V+S
Sbjct: 104 QVYAW--GFAADGQLGLPGTEEYTRVPRNIKSLSD-VQIVQVACGYYHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L L + + I +L P G Q+A G AH+ +T G
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLL---GIPFG-------QIAAGGAHSFALTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D + P ++
Sbjct: 210 AVFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 116/278 (41%), Gaps = 49/278 (17%)
Query: 32 DGQLGFSGSN--SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
DGQLG G+ + VP I+ SL D ++I V G SLA+
Sbjct: 113 DGQLGLPGTEEYTRVPRNIK---------SLSD---------VQIVQVACGYYHSLALSK 154
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
++ WG G+ L +P + G ++A G H AL +G
Sbjct: 155 GSEVFSWGQN--KHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSG--- 209
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
+ WG N GQLGL D R P ++++ S VY ++CG HTA LT
Sbjct: 210 -----AVFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ISCGEDHTAALTK-- 259
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSS 268
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S
Sbjct: 260 ------EGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFVPS 312
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G ++S+ GL N L + SP + GN
Sbjct: 313 TGRIYSF------GLGGNGQLGMGSTSNRKSPFPVKGN 344
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 44/291 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT--PSPVWDFHGHTVVK 131
I +V G +L +++ G ++ WG + + G +T P + +V+
Sbjct: 86 IVAVSCGEAHTLTLNDKGQVYAWGFA----ADGQLGLPGTEEYTRVPRNIKSLSDVQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
VACG H +AL E + SWG N +GQLGLG D + + P++I++ P+
Sbjct: 142 VACGYYHSLALSKGSEVF--------SWGQNKHGQLGLGYDLKKQTSPQLIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
++ G H+ LT L + +G + GQLG VP +K L +
Sbjct: 193 G--QIAAGGAHSFALT--------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISGNG 307
+V + CG HT+ ++ G V+++G G G L N G I+P + GN
Sbjct: 242 QKIVYISCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTGHEINPRKVFELMGN- 294
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q+ACG HT +++S+G G +G LG G T + +P
Sbjct: 295 -------IVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338
>gi|345788791|ref|XP_542564.3| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Canis lupus familiaris]
Length = 529
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 113/236 (47%), Gaps = 34/236 (14%)
Query: 131 KVACGS----EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
K+AC S H+V + GE + +WG N QLG G L P I T
Sbjct: 99 KIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTTNHGLVPCHISTNLS 150
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V EV CGS+H+ +LT + + +G +GQ+G G+T + +P +V
Sbjct: 151 NK--QVTEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 200
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q +V++ CG + V + G+V+ WG N L +G+ +P I+
Sbjct: 201 CLQNKVVVNIACGQMCSMAVVNTGEVYVWGYNG------NGQLGLGSSGNQPTPCRIA-- 252
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + Q +VACG AHT+++TD+G ++++WG G LGTG + PA V+
Sbjct: 253 ALQGIRIQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNKSNQSYPAPVV 304
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/254 (27%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VTEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + + +G NGQLG G++ + P ++ L
Sbjct: 206 --VVVNIACGQMCSMAVVNTGE--------VYVWGYNGNGQLGLGSSGNQPTPCRIAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG G G N S +P+++
Sbjct: 255 QGIRIQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------APVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVLG-------TGKTIDF 355
K + AC +AHT G ++ WG RG+S VL T
Sbjct: 307 -------KDRIVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFSCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVSWRLLSVE 373
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ N G +++WG + G L SS TP + G +
Sbjct: 207 VVNIACGQMCSMAVVNTGEVYVWG------YNGNGQLGLGSSGNQPTPCRIAALQGIRIQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPAPV-VVEKDR-- 309
Query: 191 AVYEVTCGSFHTA 203
V C S HT+
Sbjct: 310 IVEIAACHSAHTS 322
>gi|119626424|gb|EAX06019.1| hect domain and RLD 6, isoform CRA_b [Homo sapiens]
Length = 1028
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|58865718|ref|NP_001012074.1| probable E3 ubiquitin-protein ligase HERC4 [Rattus norvegicus]
gi|81883244|sp|Q5PQN1.1|HERC4_RAT RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|56269464|gb|AAH87104.1| Hect domain and RLD 4 [Rattus norvegicus]
Length = 1057
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG + + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIECQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---ECQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|417407323|gb|JAA50277.1| Putative rcc1 and btb domain-containing protein 2, partial
[Desmodus rotundus]
Length = 511
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 116/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 71 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYNQLGNGTT 122
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 123 NHGSVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGCNNSGQVGS 172
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V +G+V+ WG N L
Sbjct: 173 GSTANQPIPRRVTGCLQNRVVVNIACGQMCSMAVVDSGEVYVWGYNG------NGQLGLG 226
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P I+ G + Q +VACG AHT+++TDDG ++++WG G LGTG
Sbjct: 227 SSGNHSTPCRIAA--LQGIRVQ---RVACGYAHTLVLTDDG-QVYAWGANSYGQLGTGNK 280
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 281 SNQSYPTPVV 290
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 109/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE ++WG NN+GQ+G G ++ P+ + Q+
Sbjct: 140 VIEVACGSYHSLVLTSDGEV--------FAWGCNNSGQVGSGSTANQPIPRRVTGCLQNR 191
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P ++ L
Sbjct: 192 --VVVNIACGQMCSMAVV------DSGEVYVW--GYNGNGQLGLGSSGNHSTPCRIAAL- 240
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 241 QGIRVQRVACGYAHTLVLTDDGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 292
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC + HT G ++ WG RG+S +L T
Sbjct: 293 -------KDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHLSCTDDVFAC 345
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 346 FATPAVSWRLLSVE 359
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 130
+ ++ G M S+A+ ++G +++WG + G L SS TP + G V
Sbjct: 193 VVNIACGQMCSMAVVDSGEVYVWG------YNGNGQLGLGSSGNHSTPCRIAALQGIRVQ 246
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 247 RVACGYAHTLVLTDDGQVY--------AWGANSYGQLGTGNKSNQSYP 286
>gi|327277954|ref|XP_003223728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Anolis carolinensis]
Length = 1060
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 112/267 (41%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F TV V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEVVLEPRRCNFFLNKTVRDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQLG +SR RP+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQLG--HEKSRKRPEQVGALDAQN---IVAVSCGEAHTLTL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W G +GQLG GT + VP +K L V +V V CG +H+ +S +V+S
Sbjct: 104 QVYAW--GFAADGQLGLPGTEEYTRVPRNIKSLSD-VQIVQVACGYYHSLALSKGSEVFS 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L L + + I +L P G Q+A G AH+ +T G
Sbjct: 161 WGQNKHGQLGLGYDLKKQTSPQLIKSLL---GIPFG-------QIAAGGAHSFALTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D + P ++
Sbjct: 210 AVFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 116/278 (41%), Gaps = 49/278 (17%)
Query: 32 DGQLGFSGSN--SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
DGQLG G+ + VP I+ SL D ++I V G SLA+
Sbjct: 113 DGQLGLPGTEEYTRVPRNIK---------SLSD---------VQIVQVACGYYHSLALSK 154
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
++ WG G+ L +P + G ++A G H AL +G
Sbjct: 155 GSEVFSWGQN--KHGQLGLGYDLKKQTSPQLIKSLLGIPFGQIAAGGAHSFALTLSG--- 209
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
+ WG N GQLGL D R P ++++ S VY ++CG HTA LT
Sbjct: 210 -----AVFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ISCGEDHTAALTK-- 259
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSS 268
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S
Sbjct: 260 ------EGGVFTFGAGGYGQLGHNSTGHEINPRKVFELMGNI-VTQIACGRQHTSAFVPS 312
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
G ++S+ GL N L + SP + GN
Sbjct: 313 TGRIYSF------GLGGNGQLGMGSTSNRKSPFPVKGN 344
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 128/291 (43%), Gaps = 44/291 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT--PSPVWDFHGHTVVK 131
I +V G +L +++ G ++ WG + + G +T P + +V+
Sbjct: 86 IVAVSCGEAHTLTLNDKGQVYAWGFA----ADGQLGLPGTEEYTRVPRNIKSLSDVQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
VACG H +AL E + SWG N +GQLGLG D + + P++I++ P+
Sbjct: 142 VACGYYHSLALSKGSEVF--------SWGQNKHGQLGLGYDLKKQTSPQLIKSL-LGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
++ G H+ LT L + +G + GQLG VP +K L +
Sbjct: 193 G--QIAAGGAHSFALT--------LSGAVFGWGRNKFGQLGLNDENDRYVPNLLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISGNG 307
+V + CG HT+ ++ G V+++G G G L N G I+P + GN
Sbjct: 242 QKIVYISCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTGHEINPRKVFELMGN- 294
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q+ACG HT +++S+G G +G LG G T + +P
Sbjct: 295 -------IVTQIACGRQHTSAFVPSTGRIYSFGLGGNGQLGMGSTSNRKSP 338
>gi|354477678|ref|XP_003501046.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Cricetulus griseus]
Length = 1057
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 117/276 (42%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS E+++ + P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGS--------EEYIRV--PRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F V V CG H V ++ G Y+ G N+ GQ LG +SR +P+ +
Sbjct: 31 FANKKVRDVGCGLRHTVFVLDDG--------TVYTCGCNDLGQ--LGHEKSRKKPEQVVA 80
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPE 242
+ + + V+CG HT L ND + W GL +GQLG G+ + VP
Sbjct: 81 LDAQN---IVAVSCGEAHTLAL------NDKGQVYSW--GLDSDGQLGLLGSEEYIRVPR 129
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAI 298
+K L + +V V CG +H+ +S A +V+ WG K GLG+ +
Sbjct: 130 NIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI---------DCKKQT 179
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP LI G F +QVA G AH+ ++T G ++ WGR + G LG D + P
Sbjct: 180 SPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233
Query: 359 AIV 361
++
Sbjct: 234 NLL 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYSWG------LDSDGQLGLLGSEEYIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V+SWG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEEYIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
+SWG G LG
Sbjct: 106 YSWGLDSDGQLG 117
>gi|351705119|gb|EHB08038.1| RCC1 and BTB domain-containing protein 2 [Heterocephalus glaber]
Length = 527
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 111/236 (47%), Gaps = 34/236 (14%)
Query: 131 KVACGS----EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
K+AC S H++ + GE + +WG N QLG G L P + T
Sbjct: 75 KIACLSYGSGPHIILATTEGEVF--------TWGHNGYTQLGNGTTNHGLVPCQVST--N 124
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S V EV CGS+H+ +LT + + +G +GQ+G G+T + +P +V
Sbjct: 125 LSNKQVIEVACGSYHSLVLTS--------DGEVYAWGYNNSGQVGSGSTANQAIPRRVTG 176
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q +V++ CG + V G+V+ WG N L +G+ +P ++
Sbjct: 177 CLQNKVVVNIACGQMCSVAVVDTGEVYVWGYNG------NGQLGLGSSGNQPTPCRVA-- 228
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + Q +VACG AHT+++TD+G ++++WG G LGTG + P V+
Sbjct: 229 ALQGIRVQ---RVACGFAHTLVLTDEG-QVYAWGANSYGQLGTGNKSNQSYPTPVV 280
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 109/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE Y+WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VIEVACGSYHSLVLTSDGEV--------YAWGYNNSGQVGSGSTANQAIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 182 --VVVNIACGQMCSVAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 231 QGIRVQRVACGFAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 282
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC + HT G ++ WG RG+S +L T
Sbjct: 283 -------KDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 335
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 336 FASPAVTWRLLSVE 349
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 183 VVNIACGQMCSVAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 237 RVACGFAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 276
>gi|26327145|dbj|BAC27316.1| unnamed protein product [Mus musculus]
Length = 551
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++++ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVMNISCGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V ++CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVMNISCGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G +++WG G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVTWRLLSVE 373
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMNISCGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 300
>gi|357439465|ref|XP_003590009.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355479057|gb|AES60260.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1080
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 83/295 (28%), Positives = 126/295 (42%), Gaps = 39/295 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V G + A+ +G L+ WG+ G + S GH VV +ACG+
Sbjct: 320 VACGEYHTCAVSISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGA 379
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H + S G+ +++G G LG GDRES PK ++ S +V
Sbjct: 380 WHTALITSNGK--------LFTFGDGTLGVLGHGDRESVAYPKELQLL---SGHKAVKVA 428
Query: 197 CGSFHTALLTHRKRPNDMLE--------SMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
CG +HTA + ND +T+G G+ +LGH ++ L P V L
Sbjct: 429 CGVWHTAAIIE---VNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCVAALA 485
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Y +L V CG T ++++G V++ G K G N + D PIL+
Sbjct: 486 DYNFL-QVACGHSLTVALTASGHVFTMG-SKAYGQLGNPT------SDGKVPILVRD--- 534
Query: 309 HGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K Q +++CG H ++T +L++WGRG +G LG G D P +V
Sbjct: 535 ---KLQGETVEEISCGTHHVAVLTSRS-ELYTWGRGANGRLGHGDIEDQKTPILV 585
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 48/293 (16%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG +S++G S V S P P+ V + G H+ +
Sbjct: 219 IESLGDVFIWGEVWAEGNSSDGLGSQVPSKIDMLIPKPLESDVVLDVNYIEPGVSHIALV 278
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE ++WG ++ G+LG G + +P+++++ S V V CG +HT
Sbjct: 279 TRQGE--------IFTWGEDSGGRLGHGFDKDYGKPRLVDSLAITS---VSFVACGEYHT 327
Query: 203 ALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
++ + +T+G G + G LGHGT S +P++V + +VS+ CG
Sbjct: 328 CAVS--------ISGDLYTWGDGTHNAGILGHGTDVSHSIPKRVTGPLEGHQVVSIACGA 379
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+HT++++S G ++++G + LG+ + R L+SG+ V+VA
Sbjct: 380 WHTALITSNGKLFTFG-DGTLGVLGHGD--RESVAYPKELQLLSGH--------KAVKVA 428
Query: 321 CGAAHTVLVTD------------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG HT + + KL++WG G LG + P V
Sbjct: 429 CGVWHTAAIIEVNDQSGSSSNTSSSKKLFTWGDGDQYRLGHANKETYLQPTCV 481
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 81/174 (46%), Gaps = 23/174 (13%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D G + + P+ V + ++VACG VAL ++G +
Sbjct: 456 LFTWGDG---DQYRLGHANKETYLQPTCVAALADYNFLQVACGHSLTVALTASGHVF--- 509
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ G+ GQLG + ++ P ++ Q V E++CG+ H A+LT R
Sbjct: 510 -----TMGSKAYGQLGNPTSDGKV-PILVRDKLQGE--TVEEISCGTHHVAVLTSR---- 557
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NG+LGHG + P V+ L + ++ ++ CG T+ +
Sbjct: 558 ----SELYTWGRGANGRLGHGDIEDQKTPILVEALKER-HVKNIACGANFTTCI 606
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
G TV +++CG+ HV L S E Y+WG NG+LG GD E + P ++E
Sbjct: 536 LQGETVEEISCGTHHVAVLTSRSE--------LYTWGRGANGRLGHGDIEDQKTPILVEA 587
Query: 184 FNQDSPWAVYEVTCGS-FHTALLTHR 208
+ V + CG+ F T + H+
Sbjct: 588 LKERH---VKNIACGANFTTCICIHK 610
>gi|444910459|ref|ZP_21230644.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444719396|gb|ELW60193.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 693
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/308 (27%), Positives = 129/308 (41%), Gaps = 49/308 (15%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + +P+++ ++ AG SLA+ G + WG + S G +
Sbjct: 378 LGDGTTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWG---VNYSGQLGDGTTT 434
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+P V D VV ++ G H +AL + G ++WG+N++GQLG G
Sbjct: 435 HRLSPVQVPDLT--DVVALSAGGNHTLALRTNG--------TVWAWGSNSDGQLGDGTTT 484
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P + V ++ G +H +L H + W +G +GQLG G
Sbjct: 485 PRLSPVQMLGLTN-----VVALSAGYYH-SLAVHT-------DGTVWAWGSNSDGQLGDG 531
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT L P QV L V L + D H+ + + G VW+WG L + R
Sbjct: 532 TTTHRLTPVQVPGLTDVVALSAGDS---HSLALRTDGTVWAWGSNSSSQLGDGTTTPRG- 587
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
SP+ + P D V ++ G AH++ + DG +W+WG G LG G T
Sbjct: 588 -----SPVQV-------PGLTDVVALSAGGAHSLALRTDG-TVWAWGSNYYGQLGDGTTT 634
Query: 354 DFFAPAIV 361
P +V
Sbjct: 635 PRLFPVLV 642
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 131/288 (45%), Gaps = 49/288 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP--SPVWDFHGHT-VVKVA 133
+ AG SLA+ G +W WG+ +SS + G + TP SPV G T VV ++
Sbjct: 1 MAAGYSHSLALHTDGTVWAWGS----NSSGQLGDG---TTTPRGSPV-QVPGLTDVVALS 52
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +AL + D ++WG+N++GQLG G RL + V
Sbjct: 53 AGNHHCLALRT--------DGTVWAWGSNSSGQLGDGTTTPRLSSVQVPGLTD-----VV 99
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ GS +T L + W +G GQLG GTT L P QV P +
Sbjct: 100 ALSAGSSYTLAL--------RTDGTVWAWGYNFYGQLGDGTTTPRLAPVQV---PGLTDV 148
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V++ G++H+ + + G VW+WG + G + + TR +SP+ + P
Sbjct: 149 VALSSGIYHSLALRTDGTVWAWG-DNASGQLGDGTATRR-----LSPVQV-------PGL 195
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D V ++ G H++ V DG +W+WG SG LG G +P V
Sbjct: 196 TDVVALSAGGYHSLAVRTDG-TVWAWGSNFSGQLGDGTATPRLSPVQV 242
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 86/319 (26%), Positives = 133/319 (41%), Gaps = 59/319 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L D + T +P+++ ++ AG LA+ G +W WG+ L D +T
Sbjct: 28 LGDGTTTPRGSPVQVPGLTDVVALSAGNHHCLALRTDGTVWAWGSNSSGQLGDGTTTPRL 87
Query: 111 SLVSSFTPSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S V G T VV ++ GS + +AL + D ++WG N GQLG
Sbjct: 88 SSV---------QVPGLTDVVALSAGSSYTLALRT--------DGTVWAWGYNFYGQLGD 130
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G RL P + V ++ G +H+ L + W +G +GQ
Sbjct: 131 GTTTPRLAPVQVPGLTD-----VVALSSGIYHSLAL--------RTDGTVWAWGDNASGQ 177
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GT L P QV P +V++ G +H+ V + G VW+WG + L
Sbjct: 178 LGDGTATRRLSPVQV---PGLTDVVALSAGGYHSLAVRTDGTVWAWGSNF------SGQL 228
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
A +SP+ +SG + V ++ ++T+ + DG +W+WG G LG
Sbjct: 229 GDGTATPRLSPVQVSG-------LTNVVALSADDSYTLALRTDG-TVWAWGYNSYGQLGD 280
Query: 350 GKTIDFFAPAIVLWPPLTE 368
G T +P V P LT
Sbjct: 281 GTTTPRLSPVQV--PGLTN 297
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/318 (28%), Positives = 134/318 (42%), Gaps = 57/318 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T AP+++ ++ +G SLA+ G +W WG+ S G +
Sbjct: 128 LGDGTTTPRLAPVQVPGLTDVVALSSGIYHSLALRTDGTVWAWGDNA---SGQLGDGTAT 184
Query: 114 SSFTPSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+P V G T VV ++ G H +A+ + D ++WG+N +GQLG G
Sbjct: 185 RRLSPVQV---PGLTDVVALSAGGYHSLAVRT--------DGTVWAWGSNFSGQLGDGTA 233
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
RL P + V S+ AL T + W +G GQLG
Sbjct: 234 TPRLSPVQVSGLTN----VVALSADDSYTLALRT---------DGTVWAWGYNSYGQLGD 280
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT L P QV P +V++ G H+ + + G VW+WG
Sbjct: 281 GTTTPRLSPVQV---PGLTNVVALSAGYSHSLALRTDGTVWAWGYNY-----------NG 326
Query: 293 EAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ G+ I P S P P F D V ++ G +H++ + DG +W+WG G LG G
Sbjct: 327 QLGNGI-PTQRS---PSIPVFGLIDVVALSAGYSHSLALRTDG-TVWAWGYNSLGQLGDG 381
Query: 351 KTIDFFAPAIVLWPPLTE 368
TI +P V P LT+
Sbjct: 382 TTIPRPSPVQV--PDLTD 397
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/313 (25%), Positives = 128/313 (40%), Gaps = 59/313 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D + T+ +P+++ ++ AGG +LA+ G +W WG + L D +T
Sbjct: 428 LGDGTTTHRLSPVQVPDLTDVVALSAGGNHTLALRTNGTVWAWGSNSDGQLGDGTT---- 483
Query: 111 SLVSSFTP--SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
TP SPV VV ++ G H +A+ + D ++WG+N++GQLG
Sbjct: 484 ------TPRLSPVQMLGLTNVVALSAGYYHSLAVHT--------DGTVWAWGSNSDGQLG 529
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G RL P + V ++ G H+ L + W +G +
Sbjct: 530 DGTTTHRLTPVQVPGLTD-----VVALSAGDSHSLAL--------RTDGTVWAWGSNSSS 576
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG GTT P QV P +V++ G H+ + + G VW+WG L +
Sbjct: 577 QLGDGTTTPRGSPVQV---PGLTDVVALSAGGAHSLALRTDGTVWAWGSNYYGQLGDGTT 633
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + P+L+S + GA H++ + DG +WG G LG
Sbjct: 634 TPR------LFPVLVS-------NLTGTSNLYAGAGHSLALRTDGTGR-AWGNNYGGQLG 679
Query: 349 TGKTIDFFAPAIV 361
G + F P V
Sbjct: 680 DGTSAFFLHPVQV 692
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 55/283 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTP--SPVWDFHGHT 128
+ ++ AG +LA+ G +W WG L D +T TP +PV G T
Sbjct: 98 VVALSAGSSYTLALRTDGTVWAWGYNFYGQLGDGTT----------TPRLAPV-QVPGLT 146
Query: 129 -VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV ++ G H +AL + D ++WG N +GQLG G RL P +
Sbjct: 147 DVVALSSGIYHSLALRT--------DGTVWAWGDNASGQLGDGTATRRLSPVQVPGLTD- 197
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++ G +H+ L R + W +G +GQLG GT L P QV L
Sbjct: 198 ----VVALSAGGYHS--LAVRT------DGTVWAWGSNFSGQLGDGTATPRLSPVQVSGL 245
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
V L + D +T + + G VW+WG L + R +SP+ +
Sbjct: 246 TNVVALSADDS---YTLALRTDGTVWAWGYNSYGQLGDGTTTPR------LSPVQV---- 292
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P + V ++ G +H++ + DG +W+WG +G LG G
Sbjct: 293 ---PGLTNVVALSAGYSHSLALRTDG-TVWAWGYNYNGQLGNG 331
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 139/356 (39%), Gaps = 85/356 (23%)
Query: 56 APDSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
A L D + T +P+++ ++ AGG SLA+ G +W WG+ S G
Sbjct: 174 ASGQLGDGTATRRLSPVQVPGLTDVVALSAGGYHSLAVRTDGTVWAWGSN---FSGQLGD 230
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQ 166
+ +P V G +VVAL SA ++Y D ++WG N+ GQ
Sbjct: 231 GTATPRLSPVQV------------SGLTNVVAL-SADDSYTLALRTDGTVWAWGYNSYGQ 277
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG G RL P + V ++ G H+ L + W +G
Sbjct: 278 LGDGTTTPRLSPVQVPGLTN-----VVALSAGYSHSLAL--------RTDGTVWAWGYNY 324
Query: 227 NGQLGHGTTQSALVPEQVK-ELPQY--VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
NGQLG+G +P Q +P + + +V++ G H+ + + G VW+WG L
Sbjct: 325 NGQLGNG------IPTQRSPSIPVFGLIDVVALSAGYSHSLALRTDGTVWAWGYNSLGQL 378
Query: 284 CPNASLTRNE--------------AGDAISPIL----------ISGNGPHG--------- 310
++ R AGD+ S L ++ +G G
Sbjct: 379 GDGTTIPRPSPVQVPDLTDVVALSAGDSHSLALRTDGTVRAWGVNYSGQLGDGTTTHRLS 438
Query: 311 ----PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
P D V ++ G HT+ + +G +W+WG G LG G T +P +L
Sbjct: 439 PVQVPDLTDVVALSAGGNHTLALRTNG-TVWAWGSNSDGQLGDGTTTPRLSPVQML 493
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 95/231 (41%), Gaps = 54/231 (23%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK-APIKI------CS 76
Y SL DG + GSNS D D T H+ P+++ +
Sbjct: 506 YHSLAVHTDGTVWAWGSNS---------------DGQLGDGTTTHRLTPVQVPGLTDVVA 550
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP--SPVWDFHGHT-VVKVA 133
+ AG SLA+ G +W WG+ +SS++ G + TP SPV G T VV ++
Sbjct: 551 LSAGDSHSLALRTDGTVWAWGS----NSSSQLGDG---TTTPRGSPV-QVPGLTDVVALS 602
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL + D ++WG+N GQLG G RL P ++ S
Sbjct: 603 AGGAHSLALRT--------DGTVWAWGSNYYGQLGDGTTTPRLFPVLVSNLTGTS----- 649
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ G+ H+ L + +G GQLG GT+ L P QV
Sbjct: 650 NLYAGAGHSLAL--------RTDGTGRAWGNNYGGQLGDGTSAFFLHPVQV 692
>gi|403356078|gb|EJY77629.1| Hect E3 ubiquitin ligase [Oxytricha trifallax]
Length = 1178
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 96/345 (27%), Positives = 143/345 (41%), Gaps = 60/345 (17%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG + L P +E + P +E +K+ + G ++A+ G
Sbjct: 53 GQLGLASMKDL-PTDVEGYPYQPTPRIIE------LLQSVKVIQIACGDAHTVALTQDGK 105
Query: 93 LWMWGNCPL-----PDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVACGSEHVVALVSA 145
L+ WG PD+S + P P + V +VACG H VA+++
Sbjct: 106 LYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVLKNLEVKQVACGKAHTVAVLNN 165
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRES----------RLRPKIIETFNQDSPWAVYEV 195
G YSWGA GQLG D S + P+ + P+ +
Sbjct: 166 GH--------LYSWGAGACGQLGHPDTSSFPADEDGYPYQPIPRCVTAL---KPFKLIHA 214
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSAL---------VPEQVK 245
+CG HT +LT D E C FG G GQLG G +Q L VP++++
Sbjct: 215 SCGDVHTMVLT------DQGEIYC--FGGGSCGQLGFGNISQMPLDVDSCPFMPVPKKIE 266
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILI 303
L Q +++VS+ CG H+ +S G V++WG LGL L +N P
Sbjct: 267 SL-QGIFIVSLSCGDSHSMALSREGHVYAWGEATYGQLGLDDIRDLPKNTDNKPYQPFPQ 325
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
K V ++CG HT+ +T+ G+ L+S+G G LG
Sbjct: 326 KVVALMNKKI---VAISCGETHTLALTEGGH-LYSFGGNTCGQLG 366
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 77/264 (29%), Positives = 110/264 (41%), Gaps = 58/264 (21%)
Query: 116 FTPSP--VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
F P P + + +VA G H VA+ G Y SWGA+ GQLGL +
Sbjct: 10 FQPHPLEIDMLRNKGIYQVAGGDGHTVAVDIKGNVY--------SWGASACGQLGLASMK 61
Query: 174 S----------RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
+ P+IIE V ++ CG HT LT + +++G
Sbjct: 62 DLPTDVEGYPYQPTPRIIELL---QSVKVIQIACGDAHTVALTQ--------DGKLYSWG 110
Query: 224 LGENGQLGHGTTQSAL------VPEQVKELPQYVYLV------SVDCGLFHTSVVSSAGD 271
G GQLGH T SA+ P Q K P+ + ++ V CG HT V + G
Sbjct: 111 GGGCGQLGHPDT-SAMPKDEDGCPYQPK--PKLIVVLKNLEVKQVACGKAHTVAVLNNGH 167
Query: 272 VWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP---VQVACGAAHT 326
++SWG LG +S +E G PI P P + +CG HT
Sbjct: 168 LYSWGAGACGQLGHPDTSSFPADEDGYPYQPI------PRCVTALKPFKLIHASCGDVHT 221
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTG 350
+++TD G +++ +G G G LG G
Sbjct: 222 MVLTDQG-EIYCFGGGSCGQLGFG 244
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 15/173 (8%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE-QVKELPQY 250
+Y+V G HT + + S C GL L P ++ EL Q
Sbjct: 25 IYQVAGGDGHTVAVDIKGNVYSWGASACGQLGLASMKDLPTDVEGYPYQPTPRIIELLQS 84
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLC-PNAS-LTRNEAGDAISP----ILIS 304
V ++ + CG HT ++ G ++SWG L P+ S + ++E G P I++
Sbjct: 85 VKVIQIACGDAHTVALTQDGKLYSWGGGGCGQLGHPDTSAMPKDEDGCPYQPKPKLIVVL 144
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
N + QVACG AHTV V ++G+ L+SWG G G LG T F A
Sbjct: 145 KN-------LEVKQVACGKAHTVAVLNNGH-LYSWGAGACGQLGHPDTSSFPA 189
>gi|345325115|ref|XP_001514077.2| PREDICTED: RCC1 and BTB domain-containing protein 2
[Ornithorhynchus anatinus]
Length = 721
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 77/274 (28%), Positives = 121/274 (44%), Gaps = 35/274 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS-E 137
AG + A +N + NC S G + ++ P + G + ++ GS
Sbjct: 224 AGNEVLYATENDEVFVLGTNC----SGCLGTGDVQNTIEPRRIDSLCGKKITCLSYGSGP 279
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
HVV + GE Y +WG N QLG G L P + T + V EV C
Sbjct: 280 HVVVATAEGEVY--------TWGHNAYSQLGNGTTNHGLIPCHVSTNLVNK--KVVEVAC 329
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+ +LT + + +G +GQ+G G+T + +P +V Q ++
Sbjct: 330 GSHHSLVLTS--------DGEVYAWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIATNIA 381
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG + V +G+V+ WG N L +G+ +P I+ G + Q
Sbjct: 382 CGQMCSMAVVESGEVYVWGYNG------NGQLGLGSSGNQPTPCRIAA--LQGIRVQ--- 430
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+V CG AHT+++TD+G +L++WG G LGTG
Sbjct: 431 RVTCGYAHTLVLTDEG-QLYAWGANSYGQLGTGN 463
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 43/250 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H + L S GE Y+WG NN+GQ+G G ++ P+ + + Q+
Sbjct: 324 VVEVACGSHHSLVLTSDGEV--------YAWGYNNSGQVGSGSTANQPIPRRVTSCLQNK 375
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ CG + + + +G NGQLG G++ + P ++ L
Sbjct: 376 --IATNIACGQMCSMAVVESGE--------VYVWGYNGNGQLGLGSSGNQPTPCRIAAL- 424
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G +++WG L + PI +
Sbjct: 425 QGIRVQRVTCGYAHTLVLTDEGQLYAWGANS------YGQLGTGNKSNQSYPIPV----- 473
Query: 309 HGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWG--RGRSGVLG-------TGKTIDFFA 357
P +D + AC +AHT ++ WG RG+S L T FA
Sbjct: 474 --PVEKDRIIEIAACHSAHTSAAKTQSGHVYMWGQCRGQSVTLPHLTHFSCTDDVFACFA 531
Query: 358 PAIVLWPPLT 367
V W L+
Sbjct: 532 TPAVTWRLLS 541
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 17/106 (16%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVVKV 132
++ G M S+A+ +G +++WG + G L SS TP + G V +V
Sbjct: 379 NIACGQMCSMAVVESGEVYVWG------YNGNGQLGLGSSGNQPTPCRIAALQGIRVQRV 432
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
CG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 433 TCGYAHTLVLTDEGQLY--------AWGANSYGQLGTGNKSNQSYP 470
>gi|408500311|ref|YP_006864230.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
gi|408465135|gb|AFU70664.1| putative regulator of chromosome condensation, RCC1 [Bifidobacterium
asteroides PRL2011]
Length = 1160
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/321 (27%), Positives = 139/321 (43%), Gaps = 32/321 (9%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
V AG SLA+ + G ++ WGN + + GG+S V P G T V+V
Sbjct: 726 VQVSAGDEQSLAVGSDGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQV 785
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL + G ++WG N G+LG G+ + P + +
Sbjct: 786 SAGYYHSLALDARGN--------IWAWGFNQFGELGNGNNINSAIPTLAQYPRDAGTVTA 837
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSAL-VPEQVKELPQY 250
+V+ G HTA + + W++G GQLG+G SA+ VP Q
Sbjct: 838 IQVSGGFHHTAAIDTKGN--------TWSWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGT 889
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V + V G H+ ++ + G+ W+WG + LG N S + DA +P+ P
Sbjct: 890 VRAIQVSAGADHSLIIDTKGNTWAWGWNQ-LGELGNGS----SSADA-NPVPGMVKYPEN 943
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
+QV+ G H++ + +G W+WG SG LG G T PA+V +P
Sbjct: 944 AGTVTAIQVSAGGYHSLAIDKNG-NAWAWGGNDSGELGIGTTSKSEIPALVQYPKNAGAV 1002
Query: 371 KQDELNTG-----GLDDEIKT 386
+++ G G+D E KT
Sbjct: 1003 TTVQVSAGGYHSLGIDKEGKT 1023
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 122/299 (40%), Gaps = 39/299 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF-SLVSSFTPSPVWDFHGHTVV 130
+ V AG SLA+D G +W WG + S + + P D T +
Sbjct: 780 LTAVQVSAGYYHSLALDARGNIWAWGFNQFGELGNGNNINSAIPTLAQYPR-DAGTVTAI 838
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+ G H A+ + G T+ SWG N GQLG G+ P ++
Sbjct: 839 QVSGGFHHTAAIDTKGNTW--------SWGWNWFGQLGNGNNIDSAIPVPVQYPRDAGTV 890
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL--VPEQVK--E 246
+V+ G+ H+ ++ + W +G + G+LG+G++ + VP VK E
Sbjct: 891 RAIQVSAGADHSLIIDTKGN--------TWAWGWNQLGELGNGSSSADANPVPGMVKYPE 942
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPIL 302
V + V G +H+ + G+ W+WG E G+G + + P L
Sbjct: 943 NAGTVTAIQVSAGGYHSLAIDKNGNAWAWGGNDSGELGIGTTSKSEI----------PAL 992
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ P VQV+ G H++ + +G K W+WG + G LG G + P V
Sbjct: 993 V--QYPKNAGAVTTVQVSAGGYHSLGIDKEG-KTWAWGYNQFGQLGNGTISNSSIPTPV 1048
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 95/219 (43%), Gaps = 22/219 (10%)
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY-EVTCGSFHTALLTHRK 209
G D Y+WG NN GQLG G R +P I++ S Y +V+ G + +
Sbjct: 683 GSDGNAYAWGRNNYGQLGDGTLTQRNKPVIVKKPAGASADFTYVQVSAGDEQSLAVGS-- 740
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV---KELPQYVYLVSVDCGLFHTSV 265
+ + +G E+GQLG+G++ + VP +V + + V V G +H+
Sbjct: 741 ------DGYVYAWGNNESGQLGNGSSGGYSTVPLRVIDPNDPRSGLTAVQVSAGYYHSLA 794
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
+ + G++W+WG + G N N AI P L P +QV+ G H
Sbjct: 795 LDARGNIWAWGFNQ-FGELGNG----NNINSAI-PTLA--QYPRDAGTVTAIQVSGGFHH 846
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
T + G WSWG G LG G ID P V +P
Sbjct: 847 TAAIDTKG-NTWSWGWNWFGQLGNGNNIDSAIPVPVQYP 884
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 80/191 (41%), Gaps = 21/191 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
++ V AG SL ID G W WG L + S+ + V P + T
Sbjct: 890 VRAIQVSAGADHSLIIDTKGNTWAWGWNQLGELGNGSSSADANPVPGMVKYPE-NAGTVT 948
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
++V+ G H +A+ G ++WG N++G+LG+G P +++
Sbjct: 949 AIQVSAGGYHSLAIDKNGN--------AWAWGGNDSGELGIGTTSKSEIPALVQYPKNAG 1000
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK-EL 247
+V+ G +H+ + E W +G + GQLG+GT ++ +P V L
Sbjct: 1001 AVTTVQVSAGGYHSLGIDK--------EGKTWAWGYNQFGQLGNGTISNSSIPTPVAFNL 1052
Query: 248 PQYVYLVSVDC 258
Q + V+ D
Sbjct: 1053 SQVISSVTFDT 1063
>gi|431917308|gb|ELK16841.1| Putative E3 ubiquitin-protein ligase HERC2 [Pteropus alecto]
Length = 883
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 114/243 (46%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 482 ALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 533
Query: 173 ESRLRPKIIETF-NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 534 VPLEEPKLISAFCGKQAGQRVVHIACGSTYSAAITA--------EGELYTWGRGNYGRLG 585
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG L
Sbjct: 586 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGD------YGKL 638
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P L+ K Q D V+V CG+ +V +T DG +++SWG+G + L
Sbjct: 639 GRGGSDGCKTPKLVE-------KLQDLDVVKVRCGSQFSVALTKDG-QVYSWGKGDNQRL 690
Query: 348 GTG 350
G G
Sbjct: 691 GHG 693
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 80/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP V VVKV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLVEKLQDLDVVKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VAL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SVALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T A PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLHATKPEPAA-LPGLDTKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 76/149 (51%), Gaps = 21/149 (14%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQV-----KELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G G+ G+LGHG T P+ + K+ Q V V + CG +++ +++ G++++
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKLISAFCGKQAGQRV--VHIACGSTYSAAITAEGELYT 575
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDD 332
WG L + D P+L++G K + VACG+ A T+ VT++
Sbjct: 576 WGRGN------YGRLGHGSSEDEAIPMLVAGL-----KGLKVIDVACGSGDAQTLAVTEN 624
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WSWG G G LG G + P +V
Sbjct: 625 G-QVWSWGDGDYGKLGRGGSDGCKTPKLV 652
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 63/129 (48%), Gaps = 11/129 (8%)
Query: 235 TQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ AL P+ V+ L + + ++ H +++ G+V+SWG G L ++ E
Sbjct: 479 SSDALAPQLVQGLVSRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEE 538
Query: 294 AGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P LIS G Q V +ACG+ ++ +T +G +L++WGRG G LG G +
Sbjct: 539 ------PKLISAFCGKQAG--QRVVHIACGSTYSAAITAEG-ELYTWGRGNYGRLGHGSS 589
Query: 353 IDFFAPAIV 361
D P +V
Sbjct: 590 EDEAIPMLV 598
>gi|379718300|ref|YP_005310431.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
gi|378566972|gb|AFC27282.1| hypothetical protein PM3016_306 [Paenibacillus mucilaginosus 3016]
Length = 1239
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 127/316 (40%), Gaps = 56/316 (17%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGF 110
L DDS T +P+++ + V AG SLA+ + G +W +G L D +T
Sbjct: 786 LGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTS--- 842
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S TP V D G VV +A G + +AL S D +SWG N G+LG G
Sbjct: 843 ---SQRTPVQVKDLTG--VVAIAAGKDFSLALKS--------DGTVWSWGQNTYGELGNG 889
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
P + V + G +H L + + +G NG+L
Sbjct: 890 TTTRSSVPVQVALLTD-----VKAIAAGDYHGVALKK--------DGSVFAWGYNGNGEL 936
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+ +T S P Q + + G +HT + S G VWSWG G G N + T
Sbjct: 937 GNSSTISQSTPVQ----SGVTGIKGIAAGPYHTLALKSDGTVWSWGYN-GYGQLGNGNNT 991
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
AI P +A G ++ +DG L+SWGR +G LG G
Sbjct: 992 SRSVPAAI------------PGLASIASIAAGENQSIAYGNDGI-LYSWGRNANGQLGNG 1038
Query: 351 KTIDFFAPAIVLWPPL 366
T+D P V+ P +
Sbjct: 1039 TTVDTNVPHKVIGPNI 1054
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 128/317 (40%), Gaps = 55/317 (17%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLA----------IDNAGALWMWGNCPL 101
T+ A D+ ++S + AP+ + A G + LA I + G +W WG
Sbjct: 676 FTVKAKDTAGNESAAS--APVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWG---Y 730
Query: 102 PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
G + S+ P V + G ++ A G H VAL S D ++WG
Sbjct: 731 NGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRS--------DGTLHTWGY 780
Query: 162 NNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
N GQLG +R P + T W V+ G H+ L + W
Sbjct: 781 NGYGQLGDDSTTTRYSPVQVSTLTN---WTA--VSAGENHSLALKS--------DGTVWA 827
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
FG GQLG GTT S P QVK+L +V++ G + + S G VWSWG +
Sbjct: 828 FGYNGYGQLGDGTTSSQRTPVQVKDL---TGVVAIAAGKDFSLALKSDGTVWSWG-QNTY 883
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G N + TR+ P+ ++ D +A G H V + DG +++WG
Sbjct: 884 GELGNGTTTRSSV-----PVQVA-------LLTDVKAIAAGDYHGVALKKDG-SVFAWGY 930
Query: 342 GRSGVLGTGKTIDFFAP 358
+G LG TI P
Sbjct: 931 NGNGELGNSSTISQSTP 947
>gi|397480406|ref|XP_003811475.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2 [Pan
paniscus]
gi|426375451|ref|XP_004054552.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 3
[Gorilla gorilla gorilla]
gi|194376922|dbj|BAG63022.1| unnamed protein product [Homo sapiens]
Length = 556
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 90 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 141
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 142 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 191
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 192 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 245
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 246 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 299
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 300 SNQSYPTPV 308
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 159 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 210
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 211 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 259
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 260 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 300
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 301 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 359
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 DVFACFATPAVTWRLLSVE 378
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 212 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 265
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 266 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 316
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 317 EI--AACHSTHTS 327
>gi|4557445|ref|NP_001259.1| RCC1 and BTB domain-containing protein 2 [Homo sapiens]
gi|197099869|ref|NP_001125174.1| RCC1 and BTB domain-containing protein 2 isoform 1 [Pongo abelii]
gi|332241903|ref|XP_003270124.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Nomascus leucogenys]
gi|397480404|ref|XP_003811474.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1 [Pan
paniscus]
gi|426375447|ref|XP_004054550.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 1
[Gorilla gorilla gorilla]
gi|74739686|sp|O95199.1|RCBT2_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; Short=CHC1-L;
AltName: Full=RCC1-like G exchanging factor; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|75042250|sp|Q5RCZ7.1|RCBT2_PONAB RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|3789799|gb|AAC79987.1| RCC1-like G exchanging factor RLG [Homo sapiens]
gi|20810515|gb|AAH29052.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Homo sapiens]
gi|32891797|gb|AAP88928.1| chromosome condensation 1-like [Homo sapiens]
gi|55727208|emb|CAH90360.1| hypothetical protein [Pongo abelii]
gi|119629204|gb|EAX08799.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Homo sapiens]
gi|123979830|gb|ABM81744.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|124000595|gb|ABM87806.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [synthetic construct]
gi|189055081|dbj|BAG38065.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 295 SNQSYPTPV 303
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 354
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 355 DVFACFATPAVTWRLLSVE 373
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
>gi|428171675|gb|EKX40590.1| hypothetical protein GUITHDRAFT_75473, partial [Guillardia theta
CCMP2712]
Length = 413
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 129 VVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV+V+C G+EHV+ + SAG+ Y S G NN+GQLGLG + ++E+
Sbjct: 136 VVQVSCFNGAEHVLVVTSAGQVY--------SCGCNNHGQLGLGSTKMSPSLLLVESLKH 187
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V +C H+ +++ + ++FGL + GQLG GT + L+P +V E
Sbjct: 188 ---VRVLSASCSYHHSVVVSS--------DGSAFSFGLNDCGQLGIGTRPNQLLPHRV-E 235
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
LP + CG +HT ++ G V+S G K L N L P LI+
Sbjct: 236 LPSPHLVRLAACGQYHTIFLTEEGMVFSCG--KNL----NGQLGLGSRSSTNVPTLIA-- 287
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + +ACG +HT +V +DG KL+++G G LG G T +P V
Sbjct: 288 ---ALQERPASMIACGYSHTCVVLEDG-KLFTFGYNHQGQLGLGHTDSVSSPMQV 338
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 113/243 (46%), Gaps = 38/243 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +C H V + S G + S+G N+ GQLG+G R ++L P +E S
Sbjct: 190 VLSASCSYHHSVVVSSDGSAF--------SFGLNDCGQLGIGTRPNQLLPHRVEL---PS 238
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V CG +HT LT E M ++ G NGQLG G+ S VP + L
Sbjct: 239 PHLVRLAACGQYHTIFLTE--------EGMVFSCGKNLNGQLGLGSRSSTNVPTLIAALQ 290
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + + CG HT VV G ++++G + LGL S++ + + + +
Sbjct: 291 ERPASM-IACGYSHTCVVLEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETLRNVKV--- 346
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V+++CG T ++++ G +LWS+G G LG G + D P VL P +
Sbjct: 347 ----------VKISCGTHFTCVLSESG-ELWSFGCNCHGQLGLGDSTDRLVP--VLVPSM 393
Query: 367 TEE 369
T++
Sbjct: 394 TKK 396
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 34/259 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ S S+ + + G+ + +G L D G + + P V H V
Sbjct: 188 VRVLSASCSYHHSVVVSSDGSAFSFG---LNDCGQLGIGTRPNQLLPHRVELPSPHLVRL 244
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
ACG H + L G + +S G N NGQLGLG R S P +I Q+ P +
Sbjct: 245 AACGQYHTIFLTEEG--------MVFSCGKNLNGQLGLGSRSSTNVPTLIAAL-QERPAS 295
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ + CG HT ++ + + +TFG GQLG G T S P QV+ L + V
Sbjct: 296 M--IACGYSHTCVV--------LEDGKLFTFGYNHQGQLGLGHTDSVSSPMQVETL-RNV 344
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V + CG T V+S +G++WS+G + L ++ D + P+L+ P
Sbjct: 345 KVVKISCGTHFTCVLSESGELWSFGCN------CHGQLGLGDSTDRLVPVLV----PSMT 394
Query: 312 KFQDPVQVACGAAHTVLVT 330
K ++ ++ACG H V ++
Sbjct: 395 K-KNLSEIACGFHHLVAIS 412
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 108/261 (41%), Gaps = 57/261 (21%)
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL------GLGDR 172
S V +VKVA GSE L G+ Y G N+ GQL G +R
Sbjct: 65 SLVQSLRRKRIVKVAAGSETSYFLTEEGKV--------YCCGLNSTGQLARETHQGSANR 116
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
I V +V+C G+ H ++T + ++ G +GQL
Sbjct: 117 SKEYSSDIELMEGLPPDCKVVQVSCFNGAEHVLVVTSAGQV--------YSCGCNNHGQL 168
Query: 231 GHGTTQ---SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGL 283
G G+T+ S L+ E +K +V ++S C H+ VVSS G +S+G+ + G+G
Sbjct: 169 GLGSTKMSPSLLLVESLK----HVRVLSASCSYHHSVVVSSDGSAFSFGLNDCGQLGIGT 224
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV---ACGAAHTVLVTDDGYKLWSWG 340
PN L PH + P V ACG HT+ +T++G ++S G
Sbjct: 225 RPNQLL------------------PHRVELPSPHLVRLAACGQYHTIFLTEEGM-VFSCG 265
Query: 341 RGRSGVLGTGKTIDFFAPAIV 361
+ +G LG G P ++
Sbjct: 266 KNLNGQLGLGSRSSTNVPTLI 286
>gi|390333856|ref|XP_788386.3| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Strongylocentrotus purpuratus]
Length = 782
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
PS V VVK+ACG H +AL +D +S+GA GQLG+GD +
Sbjct: 73 PSSVKGLKHAGVVKIACGRVHTIALT--------KDRHLHSFGAGGEGQLGVGDSKQYEA 124
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P++IE + ++CG+ H+A LT + +G G GQLGHG
Sbjct: 125 PRMIEELEEQD---YLLLSCGTDHSAALT--------ASGTLYMWGGGSEGQLGHGEDTE 173
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
+P +EL V + V CG +HT++++ ++++G +G L G
Sbjct: 174 VQIP---RELSMGVPVRMVSCGYYHTALLTEDKKLYTFGEGEGG----KLGLGEAHLGGV 226
Query: 298 ISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P +S F +PV V+CG AHT +T+ G+ ++++G G SG LG G
Sbjct: 227 NEPQHVSF-------FTEPVDSVSCGNAHTAAITEKGH-VYTFGNGASGQLGHG 272
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 28/189 (14%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
E+ Y +GAN+ GQLGLG R+S +P ++ V ++ CG HT LT +
Sbjct: 47 ENGRLYVFGANDWGQLGLGHRKSVNKPSSVKGLKH---AGVVKIACGRVHTIALTKDRH- 102
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+FG G GQLG G ++ P ++EL + YL+ + CG H++ ++++G
Sbjct: 103 -------LHSFGAGGEGQLGVGDSKQYEAPRMIEELEEQDYLL-LSCGTDHSAALTASGT 154
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVT 330
++ WG L E + P +S PV+ V+CG HT L+T
Sbjct: 155 LYMWGGGS------EGQLGHGEDTEVQIPRELS--------MGVPVRMVSCGYYHTALLT 200
Query: 331 DDGYKLWSW 339
+D KL+++
Sbjct: 201 ED-KKLYTF 208
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/312 (22%), Positives = 121/312 (38%), Gaps = 75/312 (24%)
Query: 14 FTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIK 73
C PF+ + + +G+L G+N + ++ P S++ H +K
Sbjct: 30 LNCSPFPFLFFFDVVITENGRLYVFGANDWGQLGLGHRKSVNKPSSVKG---LKHAGVVK 86
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
I G + ++A+ L +G + EG + S P + + +
Sbjct: 87 IA---CGRVHTIALTKDRHLHSFG------AGGEGQLGVGDSKQYEAPRMIEELEEQDYL 137
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CG++H AL ++G Y WG + GQLG G+ P+ +
Sbjct: 138 LLSCGTDHSAALTASG--------TLYMWGGGSEGQLGHGEDTEVQIPRELSMG-----V 184
Query: 191 AVYEVTCGSFHTALLTHRKR---------------------------------PNDML-- 215
V V+CG +HTALLT K+ P D +
Sbjct: 185 PVRMVSCGYYHTALLTEDKKLYTFGEGEGGKLGLGEAHLGGVNEPQHVSFFTEPVDSVSC 244
Query: 216 ----------ESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTS 264
+ +TFG G +GQLGHG +P++V L ++ V CG HT+
Sbjct: 245 GNAHTAAITEKGHVYTFGNGASGQLGHGPDHLETNIPKRVARL-EWTRCKWVSCGDCHTA 303
Query: 265 VVSSAGDVWSWG 276
+V++ G ++++G
Sbjct: 304 IVTAKGCLYTFG 315
Score = 38.9 bits (89), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V++ACG HT+ +T D + L S+G G G LG G + + AP ++
Sbjct: 85 VKIACGRVHTIALTKDRH-LHSFGAGGEGQLGVGDSKQYEAPRMI 128
>gi|332241905|ref|XP_003270125.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Nomascus leucogenys]
Length = 556
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 90 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 141
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 142 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 191
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 192 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 245
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 246 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 299
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 300 SNQSYPTPV 308
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 159 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 210
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 211 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 259
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 260 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 300
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 301 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 359
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 DVFACFATPAVTWRLLSVE 378
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 212 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 265
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 266 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 316
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 317 EI--AACHSTHTS 327
>gi|148922863|ref|NP_001092233.1| uncharacterized protein LOC100073325 [Danio rerio]
gi|146218416|gb|AAI39898.1| Zgc:163136 protein [Danio rerio]
Length = 994
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 32/260 (12%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-P 178
P+ V+++ACG +H +AL + G + + WG N GQLGL ++ + P
Sbjct: 109 PLKGLDNRQVIQIACGDQHSMALSNDG--------LLFVWGENALGQLGLRKEQAGTQSP 160
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ +++ + V +++ G H+ +L+ L + + +G GQLG G T
Sbjct: 161 QHLQSLCE---IPVAQISAGGNHSFVLS--------LSGVVFGWGSNSAGQLGLGDTTDR 209
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+P VK L VS+ CG HT+ +S G V+++G G G L N D
Sbjct: 210 FIPTIVKSLSGK-KTVSISCGGEHTATLSKGGTVFTFG-SGGFG-----QLGHNSLKDEH 262
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P L++ G K QV CG HT++ D +++S+G G G LG G+ + P
Sbjct: 263 HPRLVAE--LWGSKVS---QVTCGRHHTLVFEDSSNRIYSFGCGMQGQLGNGEQVKQSVP 317
Query: 359 AIVLWPPLTEEFKQDELNTG 378
VL P EF ++L G
Sbjct: 318 LPVLLPTECTEFTMEKLIAG 337
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/195 (26%), Positives = 79/195 (40%), Gaps = 39/195 (20%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHT 128
I + + AGG S + +G ++ WG S++ G L F P+ V G
Sbjct: 169 IPVAQISAGGNHSFVLSLSGVVFGWG------SNSAGQLGLGDTTDRFIPTIVKSLSGKK 222
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG EH L G +++G+ GQLG + P+++
Sbjct: 223 TVSISCGGEHTATLSKGG--------TVFTFGSGGFGQLGHNSLKDEHHPRLVAEL---- 270
Query: 189 PWA--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
W V +VTCG HT + + ++FG G GQLG+G EQVK+
Sbjct: 271 -WGSKVSQVTCGRHHTLVFEDSS-------NRIYSFGCGMQGQLGNG--------EQVKQ 314
Query: 247 LPQYVYLVSVDCGLF 261
L+ +C F
Sbjct: 315 SVPLPVLLPTECTEF 329
>gi|449676621|ref|XP_004208667.1| PREDICTED: uncharacterized protein LOC101237479, partial [Hydra
magnipapillata]
Length = 896
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 119/289 (41%), Gaps = 69/289 (23%)
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G VV VACG H +AL G YSWG+N GQLG+GD +R RP +I
Sbjct: 495 QGIQVVSVACGEFHTIALCEEG---------VYSWGSNEYGQLGVGDTRTRYRPVLITHI 545
Query: 185 NQDSPWAVYEVTCGSFHTALLT----------------------HRKRPN--DMLES--- 217
S + V CG++HT +T ++ P D+L+S
Sbjct: 546 ---SSKQIVSVVCGAYHTLAITSDYKVYSWGWGVHGQLGLKSVENQLTPKQIDLLDSHKV 602
Query: 218 -----------------MCWTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCG 259
+TFG GQLG G+ ++P+ V L +YL+S CG
Sbjct: 603 IQAAAGYAHSAVLTSQRYVYTFGADLYGQLGIGSHYKQVIPQLVDSLTLDSIYLIS--CG 660
Query: 260 LFHTSVVSSAGDVWSWGME-KGLGLCPNASLTRNEAGDAISPILISGNGPHGP-----KF 313
F T +S ++ WG +C A ++ G ++ N P +
Sbjct: 661 PFETIAISEDQTIFCWGRNYHQFYICAKAESSK--YGRKMASNTKDLNHRFYPETLQFQL 718
Query: 314 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q P+ Q+ CG H +++T ++++WG G LG ID AP +V
Sbjct: 719 QHPITQIFCGNWHYIILTSVN-QVYTWGYNDCGQLGHYNKIDQSAPRLV 766
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 118/295 (40%), Gaps = 47/295 (15%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H + +I SV G +LAI + ++ WG G S+ + TP + H
Sbjct: 544 HISSKQIVSVVCGAYHTLAITSDYKVYSWG---WGVHGQLGLKSVENQLTPKQIDLLDSH 600
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V++ A G H L S + Y Y++GA+ GQLG+G ++ P+++++ D
Sbjct: 601 KVIQAAAGYAHSAVLTS--QRY------VYTFGADLYGQLGIGSHYKQVIPQLVDSLTLD 652
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW--------TFGLGENGQLGHGTTQSA- 238
S +Y ++CG F T ++ + CW E+ + G +
Sbjct: 653 S---IYLISCGPFETIAISEDQTI------FCWGRNYHQFYICAKAESSKYGRKMASNTK 703
Query: 239 -----LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
PE ++ Q+ + + CG +H +++S V++WG C L
Sbjct: 704 DLNHRFYPETLQFQLQHP-ITQIFCGNWHYIILTSVNQVYTWGYND----C--GQLGHYN 756
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
D +P L+ + VA GA +V D + +WGR G +G
Sbjct: 757 KIDQSAPRLVKALIRRA-----IIGVAVGAEFSVAFDADD-NIMAWGRNDEGKIG 805
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVY 252
+ CG H A +T+ K +T+G G+ Q+ +P +++ L Q +
Sbjct: 449 RIACGRNHIAFVTNNKE--------LYTWGKECGGR--KDNVQNTCLPMRMENLHNQGIQ 498
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+VSV CG FHT + G V+SWG + L + TR P+LI+
Sbjct: 499 VVSVACGEFHTIALCEEG-VYSWGSNEYGQLGVGDTRTRYR------PVLITHISS---- 547
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ V V CGA HT+ +T D YK++SWG G G LG + P
Sbjct: 548 -KQIVSVVCGAYHTLAITSD-YKVYSWGWGVHGQLGLKSVENQLTP 591
Score = 45.8 bits (107), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
+ CG H + V++ ++++WG E G ++ + P+ + G +
Sbjct: 450 IACGRNHIAFVTNNKELYTWGKECGG--------RKDNVQNTCLPMRMENLHNQGIQV-- 499
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V VACG HT+ + ++G ++SWG G LG G T + P ++
Sbjct: 500 -VSVACGEFHTIALCEEG--VYSWGSNEYGQLGVGDTRTRYRPVLI 542
>gi|330837467|ref|YP_004412108.1| chromosome condensation regulator RCC1 [Sphaerochaeta coccoides DSM
17374]
gi|329749370|gb|AEC02726.1| regulator of chromosome condensation RCC1 [Sphaerochaeta coccoides
DSM 17374]
Length = 781
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 122/296 (41%), Gaps = 35/296 (11%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
K +K+ SV AGG +L + G LW GN ++ S TP V
Sbjct: 415 KVMVKVKSVSAGGFHTLILKMDGTLWATGNNEYGQLGVGTSGTVNSKSTPVQVM----TD 470
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V+ G H + L + G ++ G N GQLG+GD +R P + + D
Sbjct: 471 VAAVSAGWSHTMILKNDG--------TLWATGRNKVGQLGVGDNTNRSTPVQVSSMGSD- 521
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V V+ G +T ++ + W G GQLG GTT P QVK L
Sbjct: 522 ---VAAVSTGESYTMIVKK--------DGTLWATGQNTAGQLGDGTTDDRNKPVQVKGLN 570
Query: 249 QYVYLVSVD---CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V+ G FHT ++ G +W+ G LC + R +P+ +
Sbjct: 571 GVGFMTDVEDVFAGGFHTMILKKNGTLWATGFNYFGQLCDGTTTIR------TTPVQVQD 624
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G D V+ G AHT+++ DG LW+ G+ G LG I+ PA V
Sbjct: 625 SSGVG-FMTDVATVSAGWAHTMILKKDG-TLWAIGKNEQGQLGVSDKINRSTPAQV 678
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 19/111 (17%)
Query: 140 VALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
VA VSAGE+Y +D ++ G+N++G+LG+GD R P + + D V V+
Sbjct: 682 VASVSAGESYTMILKKDGTLWATGSNDSGRLGVGDNNDRSSPMQVSSMGSD----VAAVS 737
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL---VPEQV 244
G FHT +L + N L W G GQLG G + S PEQV
Sbjct: 738 AG-FHTMIL----KKNGTL----WATGYNFLGQLGLGDSGSGTDRSTPEQV 779
Score = 47.4 bits (111), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 81/206 (39%), Gaps = 37/206 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
V AGG ++ + G LW G L D +T TP V D G
Sbjct: 581 VFAGGFHTMILKKNGTLWATGFNYFGQLCDGTT------TIRTTPVQVQDSSG------- 627
Query: 134 CGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
G VA VSAG + +D ++ G N GQLG+ D+ +R P + +
Sbjct: 628 VGFMTDVATVSAGWAHTMILKKDGTLWAIGKNEQGQLGVSDKINRSTPAQVSS------- 680
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V+ G +T +L + W G ++G+LG G P QV +
Sbjct: 681 NVASVSAGESYTMILKK--------DGTLWATGSNDSGRLGVGDNNDRSSPMQVSSMGSD 732
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWG 276
V VS FHT ++ G +W+ G
Sbjct: 733 VAAVSAG---FHTMILKKNGTLWATG 755
>gi|62088666|dbj|BAD92780.1| RCC1-like G exchanging factor RLG variant [Homo sapiens]
Length = 556
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 90 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 141
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 142 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 191
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 192 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 245
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 246 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 299
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 300 SNQSYPTPV 308
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 159 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 210
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 211 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 259
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 260 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 300
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 301 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 359
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 DVFACFATPAVTWRLLSVE 378
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 212 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 265
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 266 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 316
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 317 EI--AACHSTHTS 327
>gi|262368177|pdb|3KCI|A Chain A, The Third Rld Domain Of Herc2
Length = 389
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 132/296 (44%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 107 IKKVAVNSGGKHCLALSSEGEVYSWGE---AEDGKLGHGNRSPCDRPRVIESLRGIEVVD 163
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y +WG G+LG D E +L+PK++E
Sbjct: 164 VAAGGAHSACVTAAGDLY--------TWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 212
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 213 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTG 264
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R P +
Sbjct: 265 -LGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRR--------PRQV-- 311
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 312 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 363
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 159 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 212
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 213 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 263
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 264 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 314
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 315 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAA- 365
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 366 -LQGKKVN---RVACGSAHTL 382
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 72/280 (25%), Positives = 121/280 (43%), Gaps = 35/280 (12%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
G +L +G ++ WG+ GG P+P V++ G + +
Sbjct: 10 GRENLYFQGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLF 66
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
A+ + G+ Y+ G G+LG+G ES P ++E+ Q V G
Sbjct: 67 AVTADGKL--------YATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGK 117
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
H L+ E +++G E+G+LGHG P ++ L + + +V V G
Sbjct: 118 HCLALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGG 168
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
H++ V++AGD+++WG + L +++ D + P L+ H V +A
Sbjct: 169 AHSACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIA 217
Query: 321 CGA--AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
CG+ A T+ +TDD +WSWG G G LG G + P
Sbjct: 218 CGSGDAQTLCLTDDD-TVWSWGDGDYGKLGRGGSDGCKVP 256
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 62/151 (41%), Gaps = 14/151 (9%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L G D + K + + + V+ G S+A+ +GA++ WG D G S
Sbjct: 245 LGRGGSDGCKVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGK---GDYHRLGHGS 301
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
P V G V+ +A GS H V GE Y+WG N+ GQLG G
Sbjct: 302 DDHVRRPRQVQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGT 353
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+ RP+++ V V CGS HT
Sbjct: 354 TNAIQRPRLVAALQGKK---VNRVACGSAHT 381
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 235 TQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASLT 290
T+S P ++ + Q+V++ V+V+ G H +SS G+V+SWG E G LG +
Sbjct: 90 TESVSTPTLLESI-QHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD 148
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
R +++ I + V VA G AH+ VT G L++WG+GR G LG
Sbjct: 149 RPRVIESLRGIEV-------------VDVAAGGAHSACVTAAG-DLYTWGKGRYGRLGHS 194
Query: 351 KTIDFFAPAIV 361
+ D P +V
Sbjct: 195 DSEDQLKPKLV 205
>gi|207080016|ref|NP_001128757.1| RCC1 and BTB domain-containing protein 2 isoform 2 [Pongo abelii]
gi|55726291|emb|CAH89917.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 111/239 (46%), Gaps = 31/239 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 113 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 163 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 269
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 182 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 271
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 272 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 330
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 331 DVFACFATPAVTWRLLSVE 349
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 237 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 287
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 288 EI--AACHSTHTS 298
>gi|148703915|gb|EDL35862.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
gi|148703916|gb|EDL35863.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Mus musculus]
Length = 560
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 116/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 94 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 145
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 146 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 195
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++++ CG + V G+V+ WG N L
Sbjct: 196 GSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 249
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 250 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 303
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 304 SNQSYPTPVV 313
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 163 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 214
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 215 --VVMNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 263
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G +++WG + G G N S +P+++
Sbjct: 264 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 315
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 316 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFAC 368
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 369 FATPAVTWRLLSVE 382
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 216 VMNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 269
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 270 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 309
>gi|27923073|gb|AAO27475.1| HERC2 [Homo sapiens]
Length = 328
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 125/269 (46%), Gaps = 33/269 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 85 VKKVAVHSGGRHATALTVDGKVFWWGE---GDDGKLGHFSRMNCDKPRLIEALKTKRIRD 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 142 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 190
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 191 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ- 243
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 244 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 295
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
K V VA GA H + VTD G ++++WG
Sbjct: 296 KI---VHVAVGALHCLAVTDSG-QVYAWG 320
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 75/263 (28%), Positives = 116/263 (44%), Gaps = 46/263 (17%)
Query: 109 GFSLVSSFTPSP--VWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNN 164
G + S P P + + V KVA G H AL G+ + WG ++
Sbjct: 63 GLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHATALTVDGKVF--------WWGEGDD 114
Query: 165 GQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 224
G+LG R + +P++IE + ++ CGS H+A LT +T+GL
Sbjct: 115 GKLGHFSRMNCDKPRLIEALKTKR---IRDIACGSSHSAALTS--------SGELYTWGL 163
Query: 225 GENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWG----ME 278
GE G+LGHG + L P+ VK L + ++ V CG T ++ G V+SWG +
Sbjct: 164 GEYGRLGHGDNTTQLKPKMVKVLLGH-RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGK 222
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G G ++ +N I + NG Q Q+ CGA ++ +T G +W+
Sbjct: 223 LGRGGSEGCNIPQN-----IERL----NG------QGVCQIECGAQFSLALTKSGV-VWT 266
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG+G LG G + P +V
Sbjct: 267 WGKGDYFRLGHGSDVHVRKPQVV 289
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 104/246 (42%), Gaps = 40/246 (16%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 114 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 155
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 156 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 210
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 211 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 260
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 261 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 314
Query: 271 DVWSWG 276
V++WG
Sbjct: 315 QVYAWG 320
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 11/95 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 245 VCQIECGAQFSLALTKSGVVWTWGK---GDYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 301
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G+ H +A+ +G+ Y+WG N++GQ G
Sbjct: 302 VGALHCLAVTDSGQV--------YAWGDNDHGQQG 328
>gi|291408944|ref|XP_002720770.1| PREDICTED: regulator of chromosome condensation and BTB domain
containing protein 2 [Oryctolagus cuniculus]
Length = 551
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 114/250 (45%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS HVV + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLSGKKIACLSYGSGPHVVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCQIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G T + +P +V Q +V++ CG + V G+V+ WG N L
Sbjct: 187 GPTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SGGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 108/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGPTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G+ + P +V L
Sbjct: 206 --VVVNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSGGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC + HT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVSWRLLSVE 373
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L S TP V G V
Sbjct: 207 VVNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSGGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 300
>gi|426375449|ref|XP_004054551.1| PREDICTED: RCC1 and BTB domain-containing protein 2-like isoform 2
[Gorilla gorilla gorilla]
Length = 527
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 113 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 163 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 269
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 182 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 271
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 272 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 330
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 331 DVFACFATPAVTWRLLSVE 349
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 237 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 287
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 288 EI--AACHSTHTS 298
>gi|55730398|emb|CAH91921.1| hypothetical protein [Pongo abelii]
Length = 527
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 113 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 163 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 269
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 182 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 271
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 272 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 330
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 331 DVFACFATPAVTWRLLSVE 349
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 183 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 237 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 287
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 288 EI--AACHSTHTS 298
>gi|193785714|dbj|BAG51149.1| unnamed protein product [Homo sapiens]
Length = 551
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 295 SNQSYPTPV 303
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 98/230 (42%), Gaps = 50/230 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
+ + PV V AC + HT G ++ WG RG+S +L
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 344
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
F LG N G LG G QS + P ++ L + + +S G H + ++ G+V++WG
Sbjct: 68 FVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHN 126
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L + P IS N + + ++VACG+ H++++T DG ++++
Sbjct: 127 ------AYSQLGNGTTNHGLVPCHISTNLSN----KQVIEVACGSYHSLVLTSDG-EVFA 175
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG SG +G+G T++ P V
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRV 198
>gi|159488564|ref|XP_001702277.1| hypothetical protein CHLREDRAFT_122886 [Chlamydomonas reinhardtii]
gi|158271254|gb|EDO97078.1| predicted protein [Chlamydomonas reinhardtii]
Length = 376
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 108/246 (43%), Gaps = 31/246 (12%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F P P+ F G V +VACG H + + D Y++G N NGQLGLG
Sbjct: 104 FVPRPIAFFSGRPVARVACGDTHTLVVTQG-------DGALYTFGRNQNGQLGLGHTNDC 156
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P+++ + V V CGS H+ T +++G G G LG G +
Sbjct: 157 LSPQLVTALQGER---VSSVACGSEHSLAATE--------AGTVFSWGWGRYGNLGDGDS 205
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
Q P +V L V + SV CG H++VV+ G V+++G K L +
Sbjct: 206 QDRYTPTRVVGLDG-VTVTSVVCGWRHSAVVTDEGRVFTFGWSK------YGQLGHGDHV 258
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
D P L++ G + VA G HT+ +G L++WG + G LG G + D
Sbjct: 259 DHTRPCLVA-----GLQHCRVSTVAGGWRHTMAADSEG-NLYAWGWNKFGQLGLGDSEDR 312
Query: 356 FAPAIV 361
AP V
Sbjct: 313 AAPTPV 318
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 110/247 (44%), Gaps = 34/247 (13%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+P V G V VACGSEH +A AG + SWG G LG GD + R
Sbjct: 157 LSPQLVTALQGERVSSVACGSEHSLAATEAGTVF--------SWGWGRYGNLGDGDSQDR 208
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P + + + V V CG H+A++T R +TFG + GQLGHG
Sbjct: 209 YTPTRVVGLDGVT---VTSVVCGWRHSAVVTDEGR--------VFTFGWSKYGQLGHGDH 257
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
P V L Q+ + +V G HT S G++++WG K L ++
Sbjct: 258 VDHTRPCLVAGL-QHCRVSTVAGGWRHTMAADSEGNLYAWGWNK------FGQLGLGDSE 310
Query: 296 DAISPILISG----NGPHGPKFQDPVQVA---CGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
D +P ++G G P +VA CG HTV VT+ G +++SWGRG +G LG
Sbjct: 311 DRAAPTPVAGFGLAGGGVEAGAATPRRVALLACGWRHTVAVTEAG-EVYSWGRGVNGQLG 369
Query: 349 TGKTIDF 355
G D
Sbjct: 370 HGAEQDL 376
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 32/235 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ V+CGS H +AL+ G V SWG +GQLG G + P I
Sbjct: 12 VLGVSCGSSHSIALLDCG--------VVASWGRGEDGQLGHGQADQCTSPTCIAALTDA- 62
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V V CG+ +T + + +++G G+ G+LGHG VP +
Sbjct: 63 --GVDAVVCGAEYTVAVASSR-------GQIYSWGWGDFGRLGHGECGDVFVPRPIAFFS 113
Query: 249 QYVYLVSVDCGLFHTSVVSSA-GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG HT VV+ G ++++G + N L D +SP L++
Sbjct: 114 GRP-VARVACGDTHTLVVTQGDGALYTFGRNQ------NGQLGLGHTNDCLSPQLVTA-- 164
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ + VACG+ H++ T+ G ++SWG GR G LG G + D + P V+
Sbjct: 165 ---LQGERVSSVACGSEHSLAATEAG-TVFSWGWGRYGNLGDGDSQDRYTPTRVV 215
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 102/262 (38%), Gaps = 60/262 (22%)
Query: 31 MDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+GQLG +N C+ Q +T +L+ + ++ SV G SLA A
Sbjct: 144 QNGQLGLGHTND---CLSPQLVT-----ALQGE---------RVSSVACGSEHSLAATEA 186
Query: 91 GAL--WMWGN-CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G + W WG L D ++ +TP+ V G TV V CG H + G
Sbjct: 187 GTVFSWGWGRYGNLGDGDSQ------DRYTPTRVVGLDGVTVTSVVCGWRHSAVVTDEGR 240
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+ ++G + GQLG GD RP ++ V V G HT
Sbjct: 241 VF--------TFGWSKYGQLGHGDHVDHTRPCLVAGLQHCR---VSTVAGGWRHTMAADS 289
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-------------PQYVYLV 254
E + +G + GQLG G ++ P V P+ V L+
Sbjct: 290 --------EGNLYAWGWNKFGQLGLGDSEDRAAPTPVAGFGLAGGGVEAGAATPRRVALL 341
Query: 255 SVDCGLFHTSVVSSAGDVWSWG 276
+ CG HT V+ AG+V+SWG
Sbjct: 342 A--CGWRHTVAVTEAGEVYSWG 361
>gi|345795045|ref|XP_544717.3| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC1 isoform 1 [Canis lupus familiaris]
Length = 4861
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 120/453 (26%), Positives = 183/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ V+
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVVEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V ++ G + + + D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDISIGDSXCLALRHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHNFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P +V
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVV 608
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 4345 ---IRQISAGRCHSAAWT 4359
>gi|403377072|gb|EJY88530.1| hypothetical protein OXYTRI_12294 [Oxytricha trifallax]
Length = 709
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 74/305 (24%), Positives = 138/305 (45%), Gaps = 37/305 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K+ + +GG S + G LWM G+ L D G + S T PV + +
Sbjct: 117 LKVIFLSSGGKHSGLVTEDGKLWMCGS-NLHDKLGLEGITTGSKKTFKPVELLTQIFIKQ 175
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE----SRLRPKIIETFNQD 187
VACG H +AL G+ Y WG + + + G +E ++ +P ++++F
Sbjct: 176 VACGDYHTLALSKEGQ--------VYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSF--- 224
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ + ++ CG FH+ L +++G+GE G+ GHG + P+++K
Sbjct: 225 AGKKIKQIDCGDFHSLALDDN--------GTLYSWGVGEKGECGHGKFEDQETPQRIKFF 276
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTR----NEAGDAIS 299
+ + ++ G HT +++ V++WG + G G N ++ + G+ S
Sbjct: 277 DGKI-ITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTS 335
Query: 300 PILISGNGPHGPKFQDP---VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ S F+DP Q+A G HT+++T G +++S+G + G LG ++
Sbjct: 336 YLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTSSG-QIFSFGYNQQGQLGHNTVDNYC 394
Query: 357 APAIV 361
P +V
Sbjct: 395 RPKLV 399
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 95/226 (42%), Gaps = 39/226 (17%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A KI + G SLA+D+ G L+ WG + + G TP + F G +
Sbjct: 225 AGKKIKQIDCGDFHSLALDDNGTLYSWG---VGEKGECGHGKFEDQETPQRIKFFDGKII 281
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE------- 182
++ G+ H +A+ + D Y+WG GQ G G+ E+ P+++
Sbjct: 282 TQIEAGNHHTLAITA--------DNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNN 333
Query: 183 -TFNQDS-----------PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
++ DS P + ++ G HT +LT ++FG + GQL
Sbjct: 334 TSYLDDSVQQEILEFFKDPPKIKQIAAGEMHTLVLTS--------SGQIFSFGYNQQGQL 385
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
GH T + P+ V+ + + V V G H+ +++ DV++ G
Sbjct: 386 GHNTVDNYCRPKLVEGMLNHK-TVQVAAGRNHSLCLTNKNDVYACG 430
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 26/210 (12%)
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
+S+G N G+LG G L P+ + V ++ G H+ L+T
Sbjct: 86 VWSFGQNTKGELGTGHYNEVLMPERVRGL---PKLKVIFLSSGGKHSGLVTE-------- 134
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W G + +LG G T + + EL +++ V CG +HT +S G V+
Sbjct: 135 DGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQIFIKQVACGDYHTLALSKEGQVYV 194
Query: 275 WGMEKGLGLCPNASLTRNEA---GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
WG G N R++ P+L+ G K + Q+ CG H++ + D
Sbjct: 195 WG-----GSLHNKRGDRSQERKDNAKYKPVLLQSFA--GKKIK---QIDCGDFHSLALDD 244
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+G L+SWG G G G GK D P +
Sbjct: 245 NG-TLYSWGVGEKGECGHGKFEDQETPQRI 273
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 46/263 (17%)
Query: 140 VALVSAGETYKG---EDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYE 194
V +S+G + G ED + G+N + +LGL S+ K +E Q + +
Sbjct: 119 VIFLSSGGKHSGLVTEDGKLWMCGSNLHDKLGLEGITTGSKKTFKPVELLTQ---IFIKQ 175
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV--- 251
V CG +HT L+ E + +G + + G + + + L Q
Sbjct: 176 VACGDYHTLALSK--------EGQVYVWGGSLHNKRGDRSQERKDNAKYKPVLLQSFAGK 227
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +DCG FH+ + G ++SWG+ EK G C + E P
Sbjct: 228 KIKQIDCGDFHSLALDDNGTLYSWGVGEK--GECGHGKFEDQET-------------PQR 272
Query: 311 PKFQDP---VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
KF D Q+ G HT+ +T D ++++WG GR G G G+ + P +V +P
Sbjct: 273 IKFFDGKIITQIEAGNHHTLAITADN-QVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQG 331
Query: 368 EEFKQDELNTGGLDDEIKTKDLE 390
NT LDD ++ + LE
Sbjct: 332 N-------NTSYLDDSVQQEILE 347
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 87/220 (39%), Gaps = 55/220 (25%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG-------------NCPLPD----SSTEGGFSLVSSF 116
I ++AG +LAI ++ WG N +P S S +
Sbjct: 281 ITQIEAGNHHTLAITADNQVYAWGDGRYGQCGFGEFENTAIPQLVNFPSQGNNTSYLDDS 340
Query: 117 TPSPVWDFHGH--TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
+ +F + ++A G H + L S+G+ +S+G N GQLG ++
Sbjct: 341 VQQEILEFFKDPPKIKQIAAGEMHTLVLTSSGQ--------IFSFGYNQQGQLGHNTVDN 392
Query: 175 RLRPKIIE-TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RPK++E N + +V G H+ LT++ ND+ + G + GQ G
Sbjct: 393 YCRPKLVEGMLNHKT----VQVAAGRNHSLCLTNK---NDV-----YACGNNQYGQCG-- 438
Query: 234 TTQSALVP--EQVKELPQYVYLVSVD-----CGLFHTSVV 266
+P E K + L+SV+ G FH+ VV
Sbjct: 439 ------LPDREMRKTFSHVLSLLSVNSFKLYAGGFHSWVV 472
>gi|282395057|ref|NP_598844.3| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|282396060|ref|NP_001164165.1| RCC1 and BTB domain-containing protein 2 [Mus musculus]
gi|81880241|sp|Q99LJ7.1|RCBT2_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 2; AltName:
Full=Chromosome condensation 1-like; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 2
gi|13096854|gb|AAH03224.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Mus musculus]
gi|26327151|dbj|BAC27319.1| unnamed protein product [Mus musculus]
gi|148703914|gb|EDL35861.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_a [Mus musculus]
gi|339779805|gb|AEK06433.1| RC/BTB2 [Mus musculus]
gi|339779807|gb|AEK06434.1| RC/BTB2 [Mus musculus]
Length = 551
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++++ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 109/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVMNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G +++WG G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVTWRLLSVE 373
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 300
>gi|147857410|emb|CAN82853.1| hypothetical protein VITISV_028768 [Vitis vinifera]
Length = 1156
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 45/302 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-------DF 124
+ + SV G + A+ ++G L+ WG+ G LV W
Sbjct: 359 VLVKSVSCGEYQTCALTHSGELYTWGD-------NGSGIDLVGERRKRSQWIPSRLSGPL 411
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
+G ++ VACG H+ + ++G+ + ++G G LG G ES +PK +E+
Sbjct: 412 NGTSISNVACGEWHMAIVSTSGQLF--------TYGDGTFGVLGHGKLESISQPKEVESL 463
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM---CWTFGLGENGQLGHGTTQSALVP 241
S V CG +HTA + + + +T+G G+ G+LGHG + L+P
Sbjct: 464 ---SGLWVKAAACGPWHTAAIVEVRADRLKFNTKGGKLFTWGDGDKGRLGHGDQERKLLP 520
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
V +L + + V V CG T ++ G V++ +G + L +A D I
Sbjct: 521 TCVAQLVDHDF-VQVSCGRMLTVGLTCLGTVYT------MGSAVHGQLGNPQAKDKSIAI 573
Query: 302 LISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
+ G K +D +++ G+ H +T G L++WG G +G LG G T D +PA
Sbjct: 574 V-------GGKLKDEFVKEISSGSYHVAALTSKG-SLYTWGMGANGQLGLGDTEDRNSPA 625
Query: 360 IV 361
+V
Sbjct: 626 VV 627
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 43/91 (47%), Gaps = 11/91 (12%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +++ GS HV AL S G Y +WG NGQLGLGD E R P ++E
Sbjct: 583 VKEISSGSYHVAALTSKGSLY--------TWGMGANGQLGLGDTEDRNSPAVVEALRDRQ 634
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CGS TA + K + +S C
Sbjct: 635 ---VESIACGSGFTAAICLHKSISSTDQSAC 662
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 31/180 (17%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG+ D G P+ V H V+V+CG V L G
Sbjct: 496 GKLFTWGD---GDKGRLGHGDQERKLLPTCVAQLVDHDFVQVSCGRMLTVGLTCLG---- 548
Query: 151 GEDLVCYSWGANNNGQLGLGDRESR----LRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
Y+ G+ +GQLG + + + K+ + F V E++ GS+H A LT
Sbjct: 549 ----TVYTMGSAVHGQLGNPQAKDKSIAIVGGKLKDEF-------VKEISSGSYHVAALT 597
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+ +T+G+G NGQLG G T+ P V+ L + S+ CG T+ +
Sbjct: 598 SK--------GSLYTWGMGANGQLGLGDTEDRNSPAVVEALRDR-QVESIACGSGFTAAI 648
>gi|386720863|ref|YP_006187188.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
gi|384087987|gb|AFH59423.1| hypothetical protein B2K_01550 [Paenibacillus mucilaginosus K02]
Length = 1164
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 127/316 (40%), Gaps = 56/316 (17%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGF 110
L DDS T +P+++ + V AG SLA+ + G +W +G L D +T
Sbjct: 711 LGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTS--- 767
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S TP V D G VV +A G + +AL S D +SWG N G+LG G
Sbjct: 768 ---SQRTPVQVKDLTG--VVAIAAGKDFSLALKS--------DGTVWSWGQNTYGELGNG 814
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
P + V + G +H L + + +G NG+L
Sbjct: 815 TTTRSSVPVQVALLTD-----VKAIAAGDYHGVALKK--------DGSVFAWGYNGNGEL 861
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+ +T S P Q + + G +HT + S G VWSWG G G N + T
Sbjct: 862 GNSSTISQSTPVQ----SGVTGIKGIAAGPYHTLALKSDGTVWSWGYN-GYGQLGNGNNT 916
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
AI P +A G ++ +DG L+SWGR +G LG G
Sbjct: 917 SRSVPAAI------------PGLASIASIAAGENQSIAYGNDGI-LYSWGRNANGQLGNG 963
Query: 351 KTIDFFAPAIVLWPPL 366
T+D P V+ P +
Sbjct: 964 TTVDTNVPHKVIGPNI 979
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 127/317 (40%), Gaps = 55/317 (17%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLA----------IDNAGALWMWGNCPL 101
T+ A D+ ++S AP+ + A G + LA I + G +W WG
Sbjct: 601 FTVKAKDTAGNESA--ASAPVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWG---Y 655
Query: 102 PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
G + S+ P V + G ++ A G H VAL S D ++WG
Sbjct: 656 NGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRS--------DGTLHTWGY 705
Query: 162 NNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
N GQLG +R P + T W V+ G H+ L + W
Sbjct: 706 NGYGQLGDDSTTTRYSPVQVSTLTN---WTA--VSAGENHSLALKS--------DGTVWA 752
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
FG GQLG GTT S P QVK+L +V++ G + + S G VWSWG +
Sbjct: 753 FGYNGYGQLGDGTTSSQRTPVQVKDLTG---VVAIAAGKDFSLALKSDGTVWSWG-QNTY 808
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G N + TR+ P+ ++ D +A G H V + DG +++WG
Sbjct: 809 GELGNGTTTRSSV-----PVQVA-------LLTDVKAIAAGDYHGVALKKDG-SVFAWGY 855
Query: 342 GRSGVLGTGKTIDFFAP 358
+G LG TI P
Sbjct: 856 NGNGELGNSSTISQSTP 872
>gi|403331454|gb|EJY64675.1| putative protein similar to vertebrate hect domain and RLD 3 (HERC3)
[Oxytricha trifallax]
Length = 2049
Score = 89.4 bits (220), Expect = 5e-15, Method: Composition-based stats.
Identities = 85/317 (26%), Positives = 137/317 (43%), Gaps = 51/317 (16%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
G + S+ DN G L + + D + P + + +V CG+ H
Sbjct: 1588 GILFSMGTDNNGQLGL--DVLSQDDQHSSHTPSIKVLYPRMIISLKDEVIREVCCGNSHT 1645
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS 199
+ + +G+ + WGAN GQLGLGD P+I+ A YE
Sbjct: 1646 MVINMSGQVF--------VWGANQTGQLGLGDNS----PQILS--------AGYE----- 1680
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
H+ +T E W G G G GT + P ++ + L +V CG
Sbjct: 1681 -HSIAITKSN------ELYIW----GSGGLCGIGTLKQQNAPVKIDFFNKSKILTAV-CG 1728
Query: 260 LFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ--D 315
HT V+ + +SWG+ +G LGL P +++ + G P +++ PK +
Sbjct: 1729 GLHTVAVTKDWEAYSWGLTEGGQLGL-PQSTIVKLCQGQGDEPQVLTPQ--RIPKLEGLQ 1785
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDEL 375
QVACG AH++ +T DG ++ WG+ G LG G + D F P + + ++ ++ E+
Sbjct: 1786 IAQVACGEAHSIAMTKDG-TIYGWGQSNYGQLGLGFSGDSFEPGLGM--EKSKVYEPQEI 1842
Query: 376 NTGGLDDEIKTKDLEGA 392
N GL E +K + GA
Sbjct: 1843 N--GLKHEKISKIICGA 1857
Score = 76.6 bits (187), Expect = 3e-11, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 127/309 (41%), Gaps = 59/309 (19%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ AG S+AI + L++WG+ L T L P + F+ ++ CG
Sbjct: 1675 LSAGYEHSIAITKSNELYIWGSGGLCGIGT-----LKQQNAPVKIDFFNKSKILTAVCGG 1729
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------------GDRESRLRPKIIETF 184
H VA+ +D YSWG GQLGL GD L P+ I
Sbjct: 1730 LHTVAVT--------KDWEAYSWGLTEGGQLGLPQSTIVKLCQGQGDEPQVLTPQRIPKL 1781
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG---QLGHGTTQSALV- 240
+ +V CG H+ +T +S GLG +G + G G +S +
Sbjct: 1782 EG---LQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYE 1838
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGL------CPNASLTR- 291
P+++ L ++ + + CG T + GD++ G+ LGL ASL +
Sbjct: 1839 PQEINGL-KHEKISKIICGATFTLFQTDKGDLYGCGVNDLGQLGLDTFMEEMQIASLEKV 1897
Query: 292 -----NEAGDAISP---ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK-LWSWGRG 342
N+ D I P I G H Q+ACG +H++ V+ DG LW+WG
Sbjct: 1898 KKGKHNQTSDVILPTRVICFQGIAIH--------QIACGESHSLAVSGDGMNMLWAWGMF 1949
Query: 343 RSGVLGTGK 351
++G LG G+
Sbjct: 1950 KNGQLGLGE 1958
Score = 51.6 bits (122), Expect = 0.001, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 27/128 (21%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V F G + ++ACG H +A+ G + ++WG NGQLGLG+ +L
Sbjct: 1911 PTRVICFQGIAIHQIACGESHSLAVSGDGMN------MLWAWGMFKNGQLGLGEVTMKLN 1964
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+ +++ + + CGS H+ L +G+ Q+ +TQ
Sbjct: 1965 PRPVQSLCSSQ---IQRIACGSMHSVAL------------------IGDTNQISIYSTQF 2003
Query: 238 ALVPEQVK 245
EQ+K
Sbjct: 2004 YSSNEQIK 2011
Score = 51.2 bits (121), Expect = 0.001, Method: Composition-based stats.
Identities = 56/226 (24%), Positives = 91/226 (40%), Gaps = 43/226 (19%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP-------LPDSSTEGGFSLVSS--FTPSPVW 122
++I V G S+A+ G ++ WG S E G + S + P +
Sbjct: 1784 LQIAQVACGEAHSIAMTKDGTIYGWGQSNYGQLGLGFSGDSFEPGLGMEKSKVYEPQEIN 1843
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+ K+ CG A + +T KG+ Y G N+ GQLGL ++ +E
Sbjct: 1844 GLKHEKISKIICG-----ATFTLFQTDKGD---LYGCGVNDLGQLGLDTFMEEMQIASLE 1895
Query: 183 TF-----NQDSP------------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
NQ S A++++ CG H+ ++ D + +M W +G+
Sbjct: 1896 KVKKGKHNQTSDVILPTRVICFQGIAIHQIACGESHSLAVS-----GDGM-NMLWAWGMF 1949
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+NGQLG G L P V+ L + + CG H+ V+ GD
Sbjct: 1950 KNGQLGLGEVTMKLNPRPVQSLCS-SQIQRIACGSMHS--VALIGD 1992
>gi|145597074|ref|YP_001161371.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
gi|145306411|gb|ABP56993.1| hypothetical protein Strop_4565 [Salinispora tropica CNB-440]
Length = 477
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 94/322 (29%), Positives = 131/322 (40%), Gaps = 61/322 (18%)
Query: 60 LEDDSKTNHKAPIK--------ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEG 108
L D + T+ PI I ++ AG SLA+ +AG WGN L D ST
Sbjct: 85 LGDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAGTALAWGNNLFGQLGDGST-- 142
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
S TP V G TV +A G +H +A+ SAG +WG N+ G+LG
Sbjct: 143 ----TDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAG--------TALAWGDNDRGELG 190
Query: 169 LGDRESRLRPKIIETFNQDSPWA--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
G R P + D P V + G H+ LT T+GL
Sbjct: 191 DGTTTRRDTP-----VDVDLPAGTTVTAIAAGIGHSLALTS--------AGTVLTWGLNS 237
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG 282
+GQLG GTT + P V +LP + ++ G H+ V++AG + +WG G G
Sbjct: 238 DGQLGDGTTTDSSTPIAV-DLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNNSDGQLGDG 296
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
N+S +PI + + P + G H++ VT G L +WG
Sbjct: 297 TTTNSS----------TPIAV-----NLPASTTITAIDGGRDHSLAVTSAGSAL-AWGDN 340
Query: 343 RSGVLGTGKTIDFFAPAIVLWP 364
G LG G T + P V P
Sbjct: 341 DDGQLGDGTTTNSSTPIAVNLP 362
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 129/317 (40%), Gaps = 51/317 (16%)
Query: 60 LEDDSKTNHKAPIKI--------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L D S T+ PI + ++ AG SLA+ +AG WG+ D G +
Sbjct: 137 LGDGSTTDSSTPIAVDLPAGTTVTAIAAGDDHSLAVTSAGTALAWGDN---DRGELGDGT 193
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
TP V G TV +A G H +AL SAG +WG N++GQLG G
Sbjct: 194 TTRRDTPVDVDLPAGTTVTAIAAGIGHSLALTSAG--------TVLTWGLNSDGQLGDGT 245
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
P ++ + V + GS H+ +T + W G +GQLG
Sbjct: 246 TTDSSTPIAVDLPAGTT---VTAIAAGSLHSLAVTTAG------TILAW--GNNSDGQLG 294
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNA 287
GTT ++ P V LP + ++D G H+ V+SAG +WG + G G N+
Sbjct: 295 DGTTTNSSTPIAVN-LPASTTITAIDGGRDHSLAVTSAGSALAWGDNDDGQLGDGTTTNS 353
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
S +PI + + P G+ H++ VT G L +WG G L
Sbjct: 354 S----------TPIAV-----NLPADTTVTATTAGSLHSLAVTTAGTIL-AWGNNSDGRL 397
Query: 348 GTGKTIDFFAPAIVLWP 364
G G T + P V P
Sbjct: 398 GDGTTTNSSTPIAVNLP 414
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 110/266 (41%), Gaps = 32/266 (12%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G + S TP V G T+ +A G +H +A+ SAG +WG N GQL
Sbjct: 86 GDGTTTDSSTPIAVDLPAGTTITAIAAGHDHSLAVTSAG--------TALAWGNNLFGQL 137
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G P ++ + V + G H+ +T ++ W G +
Sbjct: 138 GDGSTTDSSTPIAVDLPAGTT---VTAIAAGDDHSLAVTSAG------TALAW--GDNDR 186
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
G+LG GTT P V +LP + ++ G+ H+ ++SAG V +WG+ +
Sbjct: 187 GELGDGTTTRRDTPVDV-DLPAGTTVTAIAAGIGHSLALTSAGTVLTWGLNS------DG 239
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
L D+ +PI + + P G +A G+ H++ VT G L +WG G L
Sbjct: 240 QLGDGTTTDSSTPIAV--DLPAGTTV---TAIAAGSLHSLAVTTAGTIL-AWGNNSDGQL 293
Query: 348 GTGKTIDFFAPAIVLWPPLTEEFKQD 373
G G T + P V P T D
Sbjct: 294 GDGTTTNSSTPIAVNLPASTTITAID 319
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 62/224 (27%), Positives = 96/224 (42%), Gaps = 35/224 (15%)
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
G + D V +WG N +G+LG G T + +P AV ++ G+ TA+
Sbjct: 65 GPSRDASDTV-LAWGDNKDGELGDG-----------TTTDSSTPIAV-DLPAGTTITAIA 111
Query: 206 T---HRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
H ++ W G N GQLG G+T + P V +LP + ++ G
Sbjct: 112 AGHDHSLAVTSAGTALAW----GNNLFGQLGDGSTTDSSTPIAV-DLPAGTTVTAIAAGD 166
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
H+ V+SAG +WG + G + + TR + +P+ + + P G +A
Sbjct: 167 DHSLAVTSAGTALAWG-DNDRGELGDGTTTRRD-----TPVDV--DLPAGTTV---TAIA 215
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G H++ +T G L +WG G LG G T D P V P
Sbjct: 216 AGIGHSLALTSAGTVL-TWGLNSDGQLGDGTTTDSSTPIAVDLP 258
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 88/212 (41%), Gaps = 31/212 (14%)
Query: 60 LEDDSKTNHKAPIKI--------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L D + T+ PI + ++ AG + SLA+ AG + WGN G +
Sbjct: 241 LGDGTTTDSSTPIAVDLPAGTTVTAIAAGSLHSLAVTTAGTILAWGNN---SDGQLGDGT 297
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+S TP V T+ + G +H +A+ SAG +WG N++GQLG G
Sbjct: 298 TTNSSTPIAVNLPASTTITAIDGGRDHSLAVTSAGS--------ALAWGDNDDGQLGDGT 349
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+ P + N + V T GS H+ +T + W G +G+LG
Sbjct: 350 TTNSSTPIAV---NLPADTTVTATTAGSLHSLAVTTAG------TILAW--GNNSDGRLG 398
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
GTT ++ P V LP + + G H+
Sbjct: 399 DGTTTNSSTPIAVN-LPADTTVTATTAGSAHS 429
>gi|74144437|dbj|BAE36068.1| unnamed protein product [Mus musculus]
Length = 527
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 113 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++++ CG + V G+V+ WG N L
Sbjct: 163 GSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 270
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 271 SNQSYPTPVV 280
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 130 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 182 --VVMNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G +++WG + G G N S +P+++
Sbjct: 231 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 282
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 283 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFAC 335
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 336 FATPAVTWRLLSVE 349
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 183 VMNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 236
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 237 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 276
>gi|326673186|ref|XP_685685.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 1053
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/273 (29%), Positives = 118/273 (43%), Gaps = 47/273 (17%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F G V V CG H V L+ ED
Sbjct: 4 WGNASFGQLGL-GGIDEEVLLEPRRCEFFEGKRVRDVGCGRRHTVFLL--------EDGT 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQLG ++R +P+ + + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQLG--HEKARKKPEQVVSLDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GLG +GQLG + L VP VK L + V++ V CG +H+ ++ G+++S
Sbjct: 104 QVFAW--GLGSDGQLGLSIVEDCLRVPRTVKSLSE-VHITQVACGYWHSLALARGGEIFS 160
Query: 275 WGMEK----GLGLCPNASLTRNEAGDAISPILISG--NGPHGPKFQDPVQVACGAAHTVL 328
WG K GLG + SP +I P G Q++ G AH+
Sbjct: 161 WGQNKYGQLGLG---------QQGACVCSPQVIQSLQGIPFG-------QISAGGAHSFG 204
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T G ++ WGR + G LG G D P ++
Sbjct: 205 LTLSG-AIFGWGRNKFGQLGLGDNDDRRFPVLL 236
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 117/275 (42%), Gaps = 45/275 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG S ++E L + P +++ S+ + I V G SLA+ G
Sbjct: 113 DGQLGLS--------IVEDCLRV--PRTVKSLSE------VHITQVACGYWHSLALARGG 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG + V S P + G +++ G H L +G
Sbjct: 157 EIFSWGQNKYGQLGLGQQGACVCS--PQVIQSLQGIPFGQISAGGAHSFGLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGLGD + R P +++T S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLGDNDDRRFPVLLKTLR--SQQVVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAG 270
E +TFG G GQLGH +T + P +V EL V + + CG HT + + S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSV-VSQIACGRQHTLAFIPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ S+ GL N L + ISP + G
Sbjct: 315 KIDSF------GLGGNGQLGTRSTCNRISPTPVKG 343
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 84/295 (28%), Positives = 131/295 (44%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS--FTPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG S + G S+V P V + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFAWG----LGSDGQLGLSIVEDCLRVPRTVKSLSEVHITQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPW 190
VACG H +AL GE + SWG N GQLGLG + + + P++I++ Q P+
Sbjct: 142 VACGYWHSLALARGGEIF--------SWGQNKYGQLGLGQQGACVCSPQVIQSL-QGIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL--P 248
+++ G H+ LT L + +G + GQLG G P +K L
Sbjct: 193 G--QISAGGAHSFGLT--------LSGAIFGWGRNKFGQLGLGDNDDRRFPVLLKTLRSQ 242
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q VY+ CG HT+ ++ G V+++G G G L N ++P +
Sbjct: 243 QVVYIC---CGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTNHEVNPRKVF---- 289
Query: 309 HGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ V Q+ACG HT+ K+ S+G G +G LGT T + +P V
Sbjct: 290 ---ELMGSVVSQIACGRQHTLAFIPSSGKIDSFGLGGNGQLGTRSTCNRISPTPV 341
>gi|351702482|gb|EHB05401.1| Putative E3 ubiquitin-protein ligase HERC4 [Heterocephalus glaber]
Length = 1057
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVSCGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFSWGQNKYGQLGL--GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 132/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+V+CG H +AL A E + SWG N GQLGLG D + + P++I++
Sbjct: 140 VQVSCGYYHSLALSKASEVF--------SWGQNKYGQLGLGIDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 104/252 (41%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+SWG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVSCGYYHSLALSKASEVFSWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCKKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|255569912|ref|XP_002525919.1| Protein pim1, putative [Ricinus communis]
gi|223534748|gb|EEF36439.1| Protein pim1, putative [Ricinus communis]
Length = 478
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 118/252 (46%), Gaps = 44/252 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQ- 186
+ +V+CG+ HVVAL ED + +WG N GQLG G L+ P++I + +
Sbjct: 169 ICQVSCGAVHVVAL--------SEDGLLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKF 220
Query: 187 --DSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA---L 239
++P V V+CG +HTA ++ + +T+GLG GQLGH + QS L
Sbjct: 221 LDEAPELVKITRVSCGEYHTAAISEKGE--------VYTWGLGSTGQLGHTSLQSGNKEL 272
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDA 297
+P +V L + + V CG HT V+ G +++WG + LGL P D
Sbjct: 273 LPRRVVALDG-ILITDVACGGVHTCAVTQKGALYAWGGSQFGQLGLGPQTGSFSFIPSDT 331
Query: 298 IS-----PILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
S P L+ F VQ VACG +HT++ DG ++ WG G K
Sbjct: 332 ESFLRNIPALV---------FPTGVQLVACGHSHTLICLRDG-RIHGWGYNSYGQAANEK 381
Query: 352 TIDFFAPAIVLW 363
T + P+ V W
Sbjct: 382 TTYAWYPSPVDW 393
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 81/306 (26%), Positives = 116/306 (37%), Gaps = 95/306 (31%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ +ACG EH A+ S G + +WGAN GQLG G E + PK ++ +
Sbjct: 65 LDIACGREHTAAVASDGSLF--------TWGANEFGQLGDGTEEGKKYPKKVKQLETE-- 114
Query: 190 WAVYEVTCGSFHTALLTH-RKRPNDMLESMCW---------------------------- 220
V V+CG+ TA + R+ + S W
Sbjct: 115 -FVKSVSCGAHCTAAIAEPRENDGTISTSRLWVWGQNQGSNYPRLFSGAFALNTIICQVS 173
Query: 221 ----------------TFGLGENGQLGHGTTQSALVPEQV--------KELPQYVYLVSV 256
+G E GQLG G T L +V E P+ V + V
Sbjct: 174 CGAVHVVALSEDGLLQAWGYNEYGQLGRGITCEGLQGPRVINAYAKFLDEAPELVKITRV 233
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD---------AISPILISGNG 307
CG +HT+ +S G+V++W GLG T ++G+ A+ ILI+
Sbjct: 234 SCGEYHTAAISEKGEVYTW----GLGSTGQLGHTSLQSGNKELLPRRVVALDGILIT--- 286
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
VACG HT VT G L++WG + G LG G F+ P T
Sbjct: 287 ----------DVACGGVHTCAVTQKG-ALYAWGGSQFGQLGLGPQTGSFS----FIPSDT 331
Query: 368 EEFKQD 373
E F ++
Sbjct: 332 ESFLRN 337
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 95/214 (44%), Gaps = 47/214 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKII--ETF----NQDSPWAVYEVTCGSFHTALLTHRK 209
Y WG N+NGQ G +E LR PK + E F ++ W ++ CG HTA +
Sbjct: 24 YVWGYNHNGQTGRKGKEQELRIPKQLSPELFGCPAGANARW--LDIACGREHTAAVAS-- 79
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G E GQLG GT + P++VK+L + ++ SV CG T+ ++
Sbjct: 80 ------DGSLFTWGANEFGQLGDGTEEGKKYPKKVKQL-ETEFVKSVSCGAHCTAAIAEP 132
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G + P L SG QV+
Sbjct: 133 RENDGTISTSRLWVWGQNQG----------------SNYPRLFSGAFALNTII---CQVS 173
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
CGA H V +++DG L +WG G LG G T +
Sbjct: 174 CGAVHVVALSEDGL-LQAWGYNEYGQLGRGITCE 206
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/226 (26%), Positives = 87/226 (38%), Gaps = 33/226 (14%)
Query: 56 APDSLEDDSKTNHKAP--IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
P + +K +AP +KI V G + AI G ++ WG L + G SL
Sbjct: 210 GPRVINAYAKFLDEAPELVKITRVSCGEYHTAAISEKGEVYTWG---LGSTGQLGHTSLQ 266
Query: 114 SS---FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V G + VACG H A+ G Y+WG + GQLGLG
Sbjct: 267 SGNKELLPRRVVALDGILITDVACGGVHTCAVTQKG--------ALYAWGGSQFGQLGLG 318
Query: 171 DRESRLR--PKIIETFNQDSPWAVYE-----VTCGSFHTALLTHRKRPNDMLESMCWTFG 223
+ P E+F ++ P V+ V CG HT + R + +G
Sbjct: 319 PQTGSFSFIPSDTESFLRNIPALVFPTGVQLVACGHSHTLICLRDGRIHG--------WG 370
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
GQ + T A P V V ++ G H++V++ A
Sbjct: 371 YNSYGQAANEKTTYAWYPSPVDWCVGEVRKLAAGGG--HSAVLTDA 414
>gi|328865201|gb|EGG13587.1| hypothetical protein DFA_11348 [Dictyostelium fasciculatum]
Length = 628
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 88/303 (29%), Positives = 134/303 (44%), Gaps = 45/303 (14%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P SV G S+A+ N G L+ WG C + G S S +P V G +
Sbjct: 183 PTVFTSVSCGAQHSMALSNYGELYSWG-CGTGGRTGHG--SEAPSLSPQVVSALVGKQIT 239
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A G H SA +G Y+WG N GQLG + L P + +
Sbjct: 240 SMAGGMLH-----SAATDLRGS---VYTWGWNKYGQLGNNTAKKHLSPNKLRDMEKHH-- 289
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +VTCG HT LLT E ++FG GQLG G + P++V +LP++
Sbjct: 290 -VVKVTCGKNHTHLLT--------AEGHIYSFGFNVCGQLGVGGYADSQQPKKV-DLPEH 339
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG----------LCPNASLTRN--EA 294
V + G +HT +++ G+V+SWG GLG L P + + N ++
Sbjct: 340 A--VDIVSGYYHTLCLTNKGNVYSWGYMSDGALGLGDIAGHQSKPKLIPLSHIRHNYSDS 397
Query: 295 GDAISPILISGNGPHGPKFQD---PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
D+ + I SG P++ ++A GA ++ ++T G KL+ +G G S +G G
Sbjct: 398 MDSYNSIYESGGEGTNPRYAKGDVAEKIAAGAWNSAIITTSG-KLYCFGFGDSYRIGNGT 456
Query: 352 TID 354
+
Sbjct: 457 NTE 459
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 106/236 (44%), Gaps = 31/236 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +A G HV+A+V G Y+WG N GQLG GD+ +R P I +
Sbjct: 133 VLAMASGDSHVLAIVHPGNQ-------VYAWGCNRWGQLGTGDQTNRATPTPIAIA---T 182
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V+CG+ H+ L++ +++G G G+ GHG+ +L P+ V L
Sbjct: 183 PTVFTSVSCGAQHSMALSNYGE--------LYSWGCGTGGRTGHGSEAPSLSPQVVSALV 234
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ S+ G+ H++ G V++WG K L N A +SP +
Sbjct: 235 GK-QITSMAGGMLHSAATDLRGSVYTWGWNK------YGQLGNNTAKKHLSPNKLRDMEK 287
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
H V+V CG HT L+T +G+ ++S+G G LG G D P V P
Sbjct: 288 H-----HVVKVTCGKNHTHLLTAEGH-IYSFGFNVCGQLGVGGYADSQQPKKVDLP 337
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 104/234 (44%), Gaps = 34/234 (14%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
TP+P+ V+CG++H +AL + GE YSWG G+ G G L
Sbjct: 174 TPTPIAIATPTVFTSVSCGAQHSMALSNYGE--------LYSWGCGTGGRTGHGSEAPSL 225
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
P+++ + + G H+A L +T+G + GQLG+ T +
Sbjct: 226 SPQVVSALVGKQ---ITSMAGGMLHSAATD--------LRGSVYTWGWNKYGQLGNNTAK 274
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
L P +++++ ++ ++V V CG HT ++++ G ++S+G +C L D
Sbjct: 275 KHLSPNKLRDMEKH-HVVKVTCGKNHTHLLTAEGHIYSFGFN----VC--GQLGVGGYAD 327
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ P + + V + G HT+ +T+ G ++SWG G LG G
Sbjct: 328 SQQPKKVD-------LPEHAVDIVSGYYHTLCLTNKG-NVYSWGYMSDGALGLG 373
>gi|403303294|ref|XP_003942271.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Saimiri boliviensis boliviensis]
Length = 556
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 90 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 141
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 142 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 191
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V +G+V+ WG N L
Sbjct: 192 GSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNG------NGQLGLG 245
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 246 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 299
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 300 SNQSYPTPV 308
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 159 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTINQPIPRRVTGCLQNK 210
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 211 --VVVTIACGQMCCMAVV------DSGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 259
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 260 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 300
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 301 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 359
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 DVFACFATPAVTWRLLSVE 378
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ ++G +++WG + G L +S TP V G V
Sbjct: 212 VVTIACGQMCCMAVVDSGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 265
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 266 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 316
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 317 EI--AACHSTHTS 327
>gi|30682540|ref|NP_680156.2| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
gi|26452773|dbj|BAC43467.1| unknown protein [Arabidopsis thaliana]
gi|28973187|gb|AAO63918.1| putative UVB-resistance protein UVR8 [Arabidopsis thaliana]
gi|332003957|gb|AED91340.1| regulator of chromosome condensation repeat-containing protein
[Arabidopsis thaliana]
Length = 434
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 125/303 (41%), Gaps = 44/303 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVV 130
I + AG S AI G L+MWG +SS + G ++ P+ V HG T+
Sbjct: 136 ILHISAGYYHSAAITVDGELYMWGK----NSSGQLGLGKKAARVVRVPTKVEALHGITIQ 191
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL-GLGDRESRLRPKIIETFNQDSP 189
VA GSEH VA+ GE G + L G+ S P++I+
Sbjct: 192 SVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELEG--- 248
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V G H+A + FG ++G G ++A P + E+P
Sbjct: 249 IKVTNVAAGLLHSACTDENGSA--------FMFGEKSINKMGFGGVRNATTPSIISEVP- 299
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
Y V CG +HT VV+ G++++WG + N L + + SP+ +
Sbjct: 300 --YAEEVACGGYHTCVVTRGGELYTWGSNE------NGCLGTDSTYVSHSPVRV-----E 346
Query: 310 GPKFQDPV-QVACGAAHTVLVTDDGYKLWSW----------GRGRSGVLGTGKTIDFFAP 358
GP + V QV+CG HT ++D+ W W G G LG G +D+ P
Sbjct: 347 GPFLESTVSQVSCGWKHTAAISDNNVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARP 406
Query: 359 AIV 361
A+V
Sbjct: 407 AMV 409
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 105/251 (41%), Gaps = 37/251 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--PKIIETFNQ 186
++ ++ G H A+ GE Y WG N++GQLGLG + +R+ P +E +
Sbjct: 136 ILHISAGYYHSAAITVDGELYM--------WGKNSSGQLGLGKKAARVVRVPTKVEALHG 187
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL-GHGTTQSALVPEQVK 245
+ + V GS H+ +T G G L G + S P +K
Sbjct: 188 IT---IQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIK 244
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPI 301
EL + + + +V GL H++ G + +G + G G NA+ +P
Sbjct: 245 EL-EGIKVTNVAAGLLHSACTDENGSAFMFGEKSINKMGFGGVRNAT----------TPS 293
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+IS + +VACG HT +VT G +L++WG +G LGT T +P V
Sbjct: 294 IIS-------EVPYAEEVACGGYHTCVVTRGG-ELYTWGSNENGCLGTDSTYVSHSPVRV 345
Query: 362 LWPPLTEEFKQ 372
P L Q
Sbjct: 346 EGPFLESTVSQ 356
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 82/178 (46%), Gaps = 27/178 (15%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG+ + G+LGLG+ +S+ P + + S + V CG HT LT +R
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAVCSALSDHS---ITAVACGGAHTLFLTETRR-------- 102
Query: 219 CWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+ GL + GQLG +S A+ P +V L + + +S G +H++ ++ G+++ WG
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISA--GYYHSAAITVDGELYMWGK 160
Query: 278 EKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
LGL A+ + + HG Q VA G+ H+V VTD G
Sbjct: 161 NSSGQLGLGKKAA--------RVVRVPTKVEALHGITIQ---SVALGSEHSVAVTDGG 207
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 27/181 (14%)
Query: 95 MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDL 154
MWG+ D G +L S +TP+ H++ VACG H + L ET +
Sbjct: 53 MWGS---GDYGRLGLGNLDSQWTPAVCSALSDHSITAVACGGAHTLFLT---ETRR---- 102
Query: 155 VCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
++ G N+ GQLG+ D +S + P + ++D + ++ G +H+A +T
Sbjct: 103 -VFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKD----ILHISAGYYHSAAIT------- 150
Query: 214 MLESMCWTFGLGENGQLGHGTTQSAL--VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
++ + +G +GQLG G + + VP +V+ L + + SV G H+ V+ G+
Sbjct: 151 -VDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEAL-HGITIQSVALGSEHSVAVTDGGE 208
Query: 272 V 272
V
Sbjct: 209 V 209
>gi|73952751|ref|XP_860006.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Canis lupus familiaris]
Length = 1054
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 110/276 (39%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ G
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKEG 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+ WG G +P + G ++VA G H L +G
Sbjct: 157 EFFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL GE + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKEGE--------FFCWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 93/197 (47%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H++ ++ +G
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHSLALSKEG 156
Query: 334 YKLWSWGRGRSGVLGTG 350
+ + WG+ + G LG G
Sbjct: 157 -EFFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|339010099|ref|ZP_08642670.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
gi|338773369|gb|EGP32901.1| copper amine oxidase domain protein [Brevibacillus laterosporus LMG
15441]
Length = 392
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 91/331 (27%), Positives = 138/331 (41%), Gaps = 52/331 (15%)
Query: 65 KTNHKAPIK----ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
KT P+ + V G ++A+ G +W WG + E S + TP
Sbjct: 72 KTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKS--TEKTPHH 129
Query: 121 V-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
V W V +V G +AL ED +++G N +GQLG G E+R++P
Sbjct: 130 VKWL---SDVKQVRAGENFTLALK--------EDGTVWAFGKNRSGQLGDGTTETRVKPV 178
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ + + G + L+ + W +G GQLG+GT + AL
Sbjct: 179 QVSGLTD-----IVAIDAGEEFSLALSE--------DGTVWAWGNNSVGQLGNGTREKAL 225
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG-LGLCPNASLTRNEAGDAI 298
P QV EL ++++ G V+S GDV+ WG +G LG N S RN
Sbjct: 226 QPVQVSELTD---VIAISTGEKQGYAVTSNGDVYGWGYNQGKLGDGTNKS--RN------ 274
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP+LI G D + V G HT+ + +DG +W+WG G LG G +++
Sbjct: 275 SPVLIDG-------IYDVIAVDSGKQHTLALKEDG-TVWAWGTNTHGQLGYGTPVNYSMT 326
Query: 359 AIVLWPPLTEEFKQD-ELNTGGLDDEIKTKD 388
++ TE Q ++ GG KD
Sbjct: 327 PNQVFLESTEPLNQIVAIDAGGFHSHAIKKD 357
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I ++ AG SLA+ G +W WGN + G + + P V + V+ ++
Sbjct: 186 IVAIDAGEEFSLALSEDGTVWAWGNNSV---GQLGNGTREKALQPVQVSELT--DVIAIS 240
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G + A+ S G+ Y WG N G+LG G +SR P +I D + V
Sbjct: 241 TGEKQGYAVTSNGD--------VYGWGYNQ-GKLGDGTNKSRNSPVLI-----DGIYDVI 286
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQV--KELPQY 250
V G HT L + W +G +GQLG+GT ++ P QV +
Sbjct: 287 AVDSGKQHTLALKE--------DGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPL 338
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG 282
+V++D G FH+ + G VWSWG E GLG
Sbjct: 339 NQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLG 374
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 121/296 (40%), Gaps = 54/296 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ V+AG +LA+ G +W +G + L D +TE + V S + D +V
Sbjct: 136 VKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTE---TRVKPVQVSGLTD-----IV 187
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+ G E +AL ED ++WG N+ GQLG G RE L+P +
Sbjct: 188 AIDAGEEFSLAL--------SEDGTVWAWGNNSVGQLGNGTREKALQPVQVSELTD---- 235
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN-GQLGHGTTQSALVPEQVKELPQ 249
V ++ G +T +G G N G+LG GT +S P + +
Sbjct: 236 -VIAISTGEKQGYAVTSNGD----------VYGWGYNQGKLGDGTNKSRNSPVLIDGIYD 284
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISG 305
+++VD G HT + G VW+WG G G N S+T N+ + +
Sbjct: 285 ---VIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQ-------VFLES 334
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P V + G H+ + DG +WSWG +G LG G + PA +
Sbjct: 335 TEP----LNQIVAIDAGGFHSHAIKKDG-TVWSWGFNSNGELGLGHSKKQMYPAKI 385
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 64/139 (46%), Gaps = 27/139 (19%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFS 111
L D + + +P+ + +V +G +LA+ G +W WG ++T G G+
Sbjct: 265 LGDGTNKSRNSPVLIDGIYDVIAVDSGKQHTLALKEDGTVWAWG------TNTHGQLGYG 318
Query: 112 LVSSFTPSPVWDFHGHT-----VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
+++ +P F T +V + G H A+ +D +SWG N+NG+
Sbjct: 319 TPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIK--------KDGTVWSWGFNSNGE 370
Query: 167 LGLGDRESRLRPKIIETFN 185
LGLG + ++ P IET N
Sbjct: 371 LGLGHSKKQMYPAKIETIN 389
Score = 46.6 bits (109), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/182 (22%), Positives = 75/182 (41%), Gaps = 37/182 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ ++ G A+ + G ++ WG L D + + SPV + V+
Sbjct: 236 VIAISTGEKQGYAVTSNGDVYGWGYNQGKLGDGTNKS--------RNSPVLIDGIYDVIA 287
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKII-----ETFN 185
V G +H +AL ED ++WG N +GQLG G + + P + E N
Sbjct: 288 VDSGKQHTLALK--------EDGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPLN 339
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
Q + + G FH+ + + W++G NG+LG G ++ + P +++
Sbjct: 340 Q-----IVAIDAGGFHSHAIKK--------DGTVWSWGFNSNGELGLGHSKKQMYPAKIE 386
Query: 246 EL 247
+
Sbjct: 387 TI 388
>gi|432095949|gb|ELK26864.1| Putative E3 ubiquitin-protein ligase HERC3 [Myotis davidii]
Length = 1031
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG D S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKDFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG G RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLGHG-REGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKDFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|413951018|gb|AFW83667.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1054
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 132/294 (44%), Gaps = 40/294 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF----SLVSSFTPSPV-WDFHGHTVVK 131
+ G + AI +G L+ WG D S G + S + P V G V+
Sbjct: 313 ISCGEFHTCAISASGDLFNWG-----DGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLS 367
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H + S G Y++G G LG G+RES PK +E N +
Sbjct: 368 VACGSWHSALITSTGR--------LYTFGDGKFGALGHGNRESAAYPKEVEALNG---FR 416
Query: 192 VYEVTCGSFHTALLTHRKRPNDM--LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+V CG +H+A + M + +T+G G+ +LG G ++ L+P ++ L +
Sbjct: 417 TVKVACGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLE 476
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + + CG T ++++G V++ +G N L N D P L+
Sbjct: 477 HNFH-QLGCGQNMTVALATSGHVYT------MGSSDNGQLG-NPKSDGKHPCLVKD---- 524
Query: 310 GPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + + +++CGAAH ++T ++++WG G +G LG G D P IV
Sbjct: 525 --KLANELVEEISCGAAHVAVLTSRS-EVYTWGLGANGRLGHGDLNDKKTPTIV 575
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 123/279 (44%), Gaps = 45/279 (16%)
Query: 87 IDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG + D T S V P P+ V ++ CGS HV
Sbjct: 212 IESLGDVYVWGEVWTDAAPSDGHTSSSCSKVDVLIPKPLESDVVLDVNQIVCGSRHVALT 271
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E+ S V ++CG FHT
Sbjct: 272 TRQGEVF--------TWGEELGGRLGHGTDTDISRPKLVESL---SVTIVDFISCGEFHT 320
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
++ D+ W G G LG+ T S +P++V + + ++SV CG +H
Sbjct: 321 CAIS---ASGDLFN---WGDGSYRAGLLGYDTGASHWLPKRVSGPLEGLQVLSVACGSWH 374
Query: 263 TSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++++S G ++++G K LG S + +A+ NG F+ V+VA
Sbjct: 375 SALITSTGRLYTFGDGKFGALGHGNRESAAYPKEVEAL-------NG-----FR-TVKVA 421
Query: 321 CGAAHTVLVTDDGY---------KLWSWGRGRSGVLGTG 350
CG H+ + + KL++WG G LG G
Sbjct: 422 CGVWHSAAIVEASVQTGMNVVSKKLYTWGDGDKNRLGQG 460
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 114/261 (43%), Gaps = 30/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ SV G S I + G L+ +G+ G + S+ P V +G VK
Sbjct: 363 LQVLSVACGSWHSALITSTGRLYTFGDGKF---GALGHGNRESAAYPKEVEALNGFRTVK 419
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V A G ++V Y+WG + +LG GD+E+RL P ++ + +
Sbjct: 420 VACGVWHSAAIVEAS-VQTGMNVVSKKLYTWGDGDKNRLGQGDKEARLIPTCLQALLEHN 478
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+++ CG T L +T G +NGQLG+ + P VK+
Sbjct: 479 ---FHQLGCGQNMTVALA--------TSGHVYTMGSSDNGQLGNPKSDGKH-PCLVKDKL 526
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + CG H +V++S +V++W GL N L + D +P ++
Sbjct: 527 ANELVEEISCGAAHVAVLTSRSEVYTW------GLGANGRLGHGDLNDKKTPTIV----- 575
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + ++CG+ T +
Sbjct: 576 EALKDRHVKSISCGSNFTTCI 596
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 23/134 (17%)
Query: 80 GGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK-VACG 135
G M++A+ +G ++ G N L + ++G P V D + +V+ ++CG
Sbjct: 485 GQNMTVALATSGHVYTMGSSDNGQLGNPKSDGKH-------PCLVKDKLANELVEEISCG 537
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ HV L S E Y +WG NG+LG GD + P I+E V +
Sbjct: 538 AAHVAVLTSRSEVY--------TWGLGANGRLGHGDLNDKKTPTIVEALKDRH---VKSI 586
Query: 196 TCGS-FHTALLTHR 208
+CGS F T + HR
Sbjct: 587 SCGSNFTTCICIHR 600
>gi|149689922|ref|XP_001503631.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Equus caballus]
Length = 1049
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDYKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG P +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 35/202 (17%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + H +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLH--------D 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTGKTIDF 355
+++ WG+ + G LG G ID+
Sbjct: 156 SEVFCWGQNKYGQLGLG--IDY 175
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|149689920|ref|XP_001503636.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Equus caballus]
Length = 1057
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDYKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYFPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDYKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG P +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYFPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/202 (32%), Positives = 93/202 (46%), Gaps = 35/202 (17%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + H +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLH--------D 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTGKTIDF 355
+++ WG+ + G LG G ID+
Sbjct: 156 SEVFCWGQNKYGQLGLG--IDY 175
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLHDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|209878252|ref|XP_002140567.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
gi|209556173|gb|EEA06218.1| regulator of chromosome condensation family protein
[Cryptosporidium muris RN66]
Length = 477
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 123/282 (43%), Gaps = 39/282 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ +V S AI G L+ WG + L S + TP V V+
Sbjct: 94 VINVSCSDRHSAAILEDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKVI 153
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
KV+CGS H L + Y +WG G+LG GD PK+IE+ +
Sbjct: 154 KVSCGSFHTACLTDLNKAY--------TWGLGMQGRLGHGDTNDVYTPKLIESL---AGL 202
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V + CG HTA+L + + + G G G+LG G+ + +P+ ++
Sbjct: 203 SVKNIVCGGHHTAILLNNGK--------VYFCGGGAFGKLGFGSKEDIYIPKLLQGSLTN 254
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ V G H++V+++ G V++WG LG N D +SP L+
Sbjct: 255 KSIKEVSLGYQHSAVITTKGKVYTWGQGGRLGHIYNGP-----EPDILSPKLVE------ 303
Query: 311 PKFQD--PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
K V ++CG +HTV++++ G +++WG R+ LG G
Sbjct: 304 -KLNSIIAVNISCGHSHTVVISNIG-DVYAWGVTRN--LGHG 341
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 134/299 (44%), Gaps = 49/299 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+I V GG S I ++G L +WG G L P + V+ V
Sbjct: 43 RIKEVCCGGHHSAVITHSGELIVWG---YGGCGQLGLGDLKDIVIPRVMTSIK--NVINV 97
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL------RPKIIETFNQ 186
+C H A++ ED Y+WG N +G+LG+G L P+++E
Sbjct: 98 SCSDRHSAAIL--------EDGRLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLN 149
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V +V+CGSFHTA LT + +T+GLG G+LGHG T P+ ++
Sbjct: 150 EK---VIKVSCGSFHTACLTDLNKA--------YTWGLGMQGRLGHGDTNDVYTPKLIES 198
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG---DAISPILI 303
L + + ++ CG HT+++ + G V+ C + + G D P L+
Sbjct: 199 LAG-LSVKNIVCGGHHTAILLNNGKVY---------FCGGGAFGKLGFGSKEDIYIPKLL 248
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR-GRSGVLGTGKTIDFFAPAIV 361
G+ + + +V+ G H+ ++T G K+++WG+ GR G + G D +P +V
Sbjct: 249 QGSLTN----KSIKEVSLGYQHSAVITTKG-KVYTWGQGGRLGHIYNGPEPDILSPKLV 302
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 100/207 (48%), Gaps = 25/207 (12%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIE---TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+WG++ GQLG ES + PK+IE +FN+ + EV CG H+A++TH
Sbjct: 12 AWGSSEYGQLGAIYEESNIEPKLIESLYSFNR-----IKEVCCGGHHSAVITHSG----- 61
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
E + W G G GQLG G + ++P + + +++V C H++ + G +++
Sbjct: 62 -ELIVW--GYGGCGQLGLGDLKDIVIPRVMTSIKN---VINVSCSDRHSAAILEDGRLYT 115
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L + +P L+ + ++V+CG+ HT +TD
Sbjct: 116 WGCNKSGKLGIGSLNVNLNNNIICTPQLVE-----KLLNEKVIKVSCGSFHTACLTDLN- 169
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K ++WG G G LG G T D + P ++
Sbjct: 170 KAYTWGLGMQGRLGHGDTNDVYTPKLI 196
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 118/262 (45%), Gaps = 39/262 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G + + + + WG L G +TP + G +V +
Sbjct: 151 KVIKVSCGSFHTACLTDLNKAYTWG---LGMQGRLGHGDTNDVYTPKLIESLAGLSVKNI 207
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CG H L++ G+ Y C G G+LG G +E PK+++ + ++
Sbjct: 208 VCGGHHTAILLNNGKVY-----FC---GGGAFGKLGFGSKEDIYIPKLLQ--GSLTNKSI 257
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH---GTTQSALVPEQVKELPQ 249
EV+ G H+A++T + + + G+ G+LGH G L P+ V++L
Sbjct: 258 KEVSLGYQHSAVITTKGK----------VYTWGQGGRLGHIYNGPEPDILSPKLVEKLNS 307
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V++ CG HT V+S+ GDV++WG+ + LG + + + PIL
Sbjct: 308 II-AVNISCGHSHTVVISNIGDVYAWGVTRNLG---HGVIDSKPNDPTLHPIL------- 356
Query: 310 GPKFQDPVQVACGAAHTVLVTD 331
+ ++ VQV+CG HT+ ++D
Sbjct: 357 --QNKNIVQVSCGKTHTIALSD 376
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/161 (24%), Positives = 78/161 (48%), Gaps = 14/161 (8%)
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
++S +G E GQLG +S + P+ ++ L + + V CG H++V++ +G++
Sbjct: 6 VKSGVVAWGSSEYGQLGAIYEESNIEPKLIESLYSFNRIKEVCCGGHHSAVITHSGELIV 65
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG G C L + D + P +++ ++ + V+C H+ + +DG
Sbjct: 66 WGY----GGC--GQLGLGDLKDIVIPRVMT-------SIKNVINVSCSDRHSAAILEDG- 111
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDEL 375
+L++WG +SG LG G I+ P L E+ +++
Sbjct: 112 RLYTWGCNKSGKLGIGSLNVNLNNNIICTPQLVEKLLNEKV 152
>gi|395820632|ref|XP_003783667.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Otolemur
garnettii]
Length = 1049
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GLDCKKQTSPQLIKSLVGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGLDCKKQTSPQLIKSL---V 188
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 189 GIPFMQVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLGL
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGL------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCKKQTSPQLIK--SLVGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|344247622|gb|EGW03726.1| putative E3 ubiquitin-protein ligase HERC4 [Cricetulus griseus]
Length = 835
Score = 89.0 bits (219), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 80/276 (28%), Positives = 115/276 (41%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS E+++ + P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGS--------EEYIRV--PRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--- 211
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 212 -----FGWGRNKFGQLGLNDENDRYVPNLLKSLRSQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 110/243 (45%), Gaps = 42/243 (17%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F V V CG H V ++ G Y+ G N+ GQ LG +SR +P+ +
Sbjct: 31 FANKKVRDVGCGLRHTVFVLDDGTV--------YTCGCNDLGQ--LGHEKSRKKPEQVVA 80
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPE 242
+ + + V+CG HT L ND + W GL +GQLG G+ + VP
Sbjct: 81 LDAQN---IVAVSCGEAHTLAL------NDKGQVYSW--GLDSDGQLGLLGSEEYIRVPR 129
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAI 298
+K L + +V V CG +H+ +S A +V+ WG K GLG+ +
Sbjct: 130 NIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI---------DCKKQT 179
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP LI G F +QVA G AH+ ++T G ++ WGR + G LG D + P
Sbjct: 180 SPQLI--KSLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVP 233
Query: 359 AIV 361
++
Sbjct: 234 NLL 236
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYSWG------LDSDGQLGLLGSEEYIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFANKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V+SWG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYSWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEEYIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 44.3 bits (103), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFANKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
+SWG G LG
Sbjct: 106 YSWGLDSDGQLG 117
>gi|47216552|emb|CAG04730.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1036
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 113/244 (46%), Gaps = 44/244 (18%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
FHG V V CG +H V L+ G Y+ G N+ GQLG +SR +P+ +
Sbjct: 31 FHGKRVCDVGCGLKHTVFLLDDG--------TVYTCGCNDLGQLG--HEKSRKKPEHVVA 80
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPE 242
+ + V+CG HT L ND + W GLG NGQLG + + VP
Sbjct: 81 LDAQ---IIVAVSCGESHTLAL------NDKGQVFSW--GLGSNGQLGLNNFEECVRVPR 129
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAI 298
+K L V + V CG +H+ +S G V+SWG + GLG+ G +I
Sbjct: 130 NIKCLSD-VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGM----------HGSSI 178
Query: 299 S-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
S P +I G F Q++ G AH+ +T G ++ WG+ + G LG T D +
Sbjct: 179 STPQII--QSLQGIPF---AQLSAGGAHSFAITLSG-AVFGWGKNKFGQLGLNDTKDRWF 232
Query: 358 PAIV 361
PA++
Sbjct: 233 PALL 236
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 79/188 (42%), Gaps = 22/188 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++I V G S A+ G ++ WG S +S TP + G +
Sbjct: 137 VQIAQVACGYWHSHALSKGGQVFSWGQNQFGQLGLGMHGSSIS--TPQIIQSLQGIPFAQ 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ G H A+ +G + WG N GQLGL D + R P ++++
Sbjct: 195 LSAGGAHSFAITLSG--------AVFGWGKNKFGQLGLNDTKDRWFPALLKSLRSQR--- 243
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V+CG HTA LT + +TFG G GQLGH T + P +V EL V
Sbjct: 244 VIFVSCGEDHTAALTKLRG--------VFTFGAGGYGQLGHNCTNHEINPRKVFELMGNV 295
Query: 252 YLVSVDCG 259
+ + CG
Sbjct: 296 -VTQISCG 302
>gi|403303292|ref|XP_003942270.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 551
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V +G+V+ WG N L
Sbjct: 187 GSTINQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 293
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTINQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DSGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 354
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 355 DVFACFATPAVTWRLLSVE 373
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ ++G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDSGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
>gi|291404283|ref|XP_002718505.1| PREDICTED: hect domain and RLD 4 isoform 2 [Oryctolagus cuniculus]
Length = 1049
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCKKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|291404281|ref|XP_002718504.1| PREDICTED: hect domain and RLD 4 isoform 1 [Oryctolagus cuniculus]
Length = 1057
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|148666329|gb|EDK98745.1| hect domain and RLD 3, isoform CRA_a [Mus musculus]
Length = 913
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSVNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ + ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY--------TCGVNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISG 305
L Q L V CG +H +++ G ++WG +N G + S
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWG--------------KNSHGQLGLGKEFPSQ 178
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P + + + QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSVNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT L P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLALV----PSS---GLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
>gi|428164001|gb|EKX33045.1| hypothetical protein GUITHDRAFT_148202 [Guillardia theta CCMP2712]
Length = 371
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 109/237 (45%), Gaps = 40/237 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V+ G H A+V G+ + WG +GQLGLG +S P+ +
Sbjct: 81 VTCVSAGHRHAAAIVGGGDVF--------VWGRGFSGQLGLGTNKSHFTPQPLSF----- 127
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V ++CG H+ +T R + G G+ GQLG G+ +S L P +V+
Sbjct: 128 PMPVKALSCGGSHSLFITEDGR--------LYATGRGKEGQLGTGSQESVLSPVEVQMPE 179
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
+ + +CG + + + +G V+++G + GLG ++T E +++
Sbjct: 180 GSGRVKAAECGKDFSVIATESGQVFTFGSDDYGQLGLGQFARYAMTPKEVA------VLA 233
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++ +A G H VT DG KL++WG GRSG LG G T+D P +V
Sbjct: 234 G--------KNVRSIAAGDYHAAAVTSDG-KLYTWGYGRSGQLGNGNTVDVSLPVLV 281
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 131/311 (42%), Gaps = 57/311 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ V AG + AI G +++WG S G + S FTP P+ F V ++
Sbjct: 81 VTCVSAGHRHAAAIVGGGDVFVWGR---GFSGQLGLGTNKSHFTPQPL-SFP-MPVKALS 135
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H + + ED Y+ G GQLG G +ES L P +E + V
Sbjct: 136 CGGSHSLFIT--------EDGRLYATGRGKEGQLGTGSQESVLSP--VEVQMPEGSGRVK 185
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVY 252
CG + + T +TFG + GQLG G + A+ P++V L
Sbjct: 186 AAECGKDFSVIATE--------SGQVFTFGSDDYGQLGLGQFARYAMTPKEVAVLAGK-N 236
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ S+ G +H + V+S G +++WG + + L D P+L+ +
Sbjct: 237 VRSIAAGDYHAAAVTSDGKLYTWGYGR------SGQLGNGNTVDVSLPVLVR-------E 283
Query: 313 FQD-PVQ-VACGAAHTVLVTDDGYK---------------LWSWGRGRSGVLGTGKTIDF 355
Q+ VQ VACG HTV V D G K ++ GRGR G LG G ++
Sbjct: 284 LQNLRVQSVACGCDHTVAVIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRGDIVE- 342
Query: 356 FAPAIVLWPPL 366
+PA+ PL
Sbjct: 343 -SPAVYRSVPL 352
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/267 (27%), Positives = 111/267 (41%), Gaps = 39/267 (14%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P+ + ++ GG SL I G L+ G G S S +P V G V
Sbjct: 128 PMPVKALSCGGSHSLFITEDGRLYATGR---GKEGQLGTGSQESVLSPVEVQMPEGSGRV 184
Query: 131 KVA-CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDS 188
K A CG + V +G+ + ++G+++ GQLGLG + PK + +
Sbjct: 185 KAAECGKDFSVIATESGQVF--------TFGSDDYGQLGLGQFARYAMTPKEVAVLAGKN 236
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + G +H A +T + +T+G G +GQLG+G T +P V+EL
Sbjct: 237 ---VRSIAAGDYHAAAVTS--------DGKLYTWGYGRSGQLGNGNTVDVSLPVLVREL- 284
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA---GDAISPILISG 305
Q + + SV CG HT V G+++ L L + L E G L G
Sbjct: 285 QNLRVQSVACGCDHTVA------VIDRGLKEQLMLISSQVLESGEVFVMGRGREGQLGRG 338
Query: 306 NGPHGPKFQDPV-----QVACGAAHTV 327
+ P V QVACG +HT+
Sbjct: 339 DIVESPAVYRSVPLQVQQVACGTSHTL 365
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 73/170 (42%), Gaps = 28/170 (16%)
Query: 207 HRKRPNDMLESM-CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
H R LE M CW G LG G T L P++V + V G H +
Sbjct: 45 HSGRLRRFLERMYCW-------GLLGLGETLDVLYPQKVN----LEGVTCVSAGHRHAAA 93
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAA 324
+ GDV+ WG G L N++ P+ F PV+ ++CG +
Sbjct: 94 IVGGGDVFVWGR----GFSGQLGLGTNKSHFTPQPL----------SFPMPVKALSCGGS 139
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDE 374
H++ +T+DG +L++ GRG+ G LGTG +P V P + K E
Sbjct: 140 HSLFITEDG-RLYATGRGKEGQLGTGSQESVLSPVEVQMPEGSGRVKAAE 188
>gi|320162832|gb|EFW39731.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 591
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 127/281 (45%), Gaps = 39/281 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ + G ++WG EG +P+ + G VV ACG+ + ++
Sbjct: 256 SVAVADNGEAYVWGRGIDGSLGVEGD----KHVSPTQIHALDGKRVVHAACGAAFTLFVI 311
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+GE Y + G N +GQLG+G E+ P ++ P + + CG+ H
Sbjct: 312 ESGEVY--------ACGNNEHGQLGIGSNEAMSEPTLVTNL----PERIVRIACGNSHAV 359
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFH 262
L+ R + +G +GQLG G + L P +V+ + CG H
Sbjct: 360 ALSETGR--------LYAWGAHSSGQLGVGEPLEDRLSPVRVESNVVRDDVADFACGGNH 411
Query: 263 TSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
T ++S++G ++++G + LGL P A T+N+A A P P G K+ ++
Sbjct: 412 TIILSNSGLLYAFGSGAQGQLGLGPLA--TKNQATPAALP------NPEGRKY---TAIS 460
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG + V+D G K+++WG G S LG +AP ++
Sbjct: 461 CGQDISAAVSDRG-KIYTWGSGASNALGLPDGRTKYAPTLI 500
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 73/280 (26%), Positives = 112/280 (40%), Gaps = 39/280 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK+ + +G M+LA+ W G E FTP + G +
Sbjct: 194 IKMLCLGSGHTMALAVSGEVYSWGLGLGGRLGQGRE-----RDRFTPLRLAGLRGFDITH 248
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-GDRESRLRPKIIETFNQDSPW 190
+AC H VA+ GE Y WG +G LG+ GD+ + P I +
Sbjct: 249 IACNENHSVAVADNGEA--------YVWGRGIDGSLGVEGDKH--VSPTQIHALDGKR-- 296
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V CG+ T + + G E+GQLG G+ ++ P V LP+
Sbjct: 297 -VVHAACGAAFTLFVIE--------SGEVYACGNNEHGQLGIGSNEAMSEPTLVTNLPER 347
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ V + CG H +S G +++WG L L D +SP+ + N
Sbjct: 348 I--VRIACGNSHAVALSETGRLYAWGAHSSGQLGVGEPLE-----DRLSPVRVESNVVR- 399
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
D ACG HT+++++ G L+++G G G LG G
Sbjct: 400 ---DDVADFACGGNHTIILSNSGL-LYAFGSGAQGQLGLG 435
Score = 45.1 bits (105), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 89/212 (41%), Gaps = 31/212 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+WG G LG G+ + P+++E D + + GS HT L +
Sbjct: 162 YTWGEGTRGMLGHGEEDPEASPRVVEALLGHD----IKMLCLGSGHTMALA--------V 209
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD--VW 273
+++GLG G+LG G + P ++ L + + + C H+ V+ G+ VW
Sbjct: 210 SGEVYSWGLGLGGRLGQGRERDRFTPLRLAGLRGF-DITHIACNENHSVAVADNGEAYVW 268
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G++ LG+ E +SP I H + V ACGAA T+ V + G
Sbjct: 269 GRGIDGSLGV---------EGDKHVSPTQI-----HALDGKRVVHAACGAAFTLFVIESG 314
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
++++ G G LG G P +V P
Sbjct: 315 -EVYACGNNEHGQLGIGSNEAMSEPTLVTNLP 345
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 62/135 (45%), Gaps = 13/135 (9%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
GG ++ + N+G L+ +G+ G + + TP+ + + G ++CG +
Sbjct: 408 GGNHTIILSNSGLLYAFGSGAQGQLGL-GPLATKNQATPAALPNPEGRKYTAISCGQD-- 464
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS 199
+SA + +G+ Y+WG+ + LGL D ++ P +IE+ V CG
Sbjct: 465 ---ISAAVSDRGK---IYTWGSGASNALGLPDGRTKYAPTLIESMADKR---CRTVACGF 515
Query: 200 FH-TALLTHRKRPND 213
FH A + H P+D
Sbjct: 516 FHMAATIIHGWVPDD 530
>gi|410208770|gb|JAA01604.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264080|gb|JAA20006.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293806|gb|JAA25503.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338543|gb|JAA38218.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 555
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 112/239 (46%), Gaps = 31/239 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGN 293
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 116/289 (40%), Gaps = 62/289 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 354
Query: 351 KTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
FA V W L+ E +D L E K+ + E D K
Sbjct: 355 DVFACFATPAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 398
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
>gi|330800861|ref|XP_003288451.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
gi|325081510|gb|EGC35023.1| hypothetical protein DICPUDRAFT_79261 [Dictyostelium purpureum]
Length = 1909
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 131/305 (42%), Gaps = 53/305 (17%)
Query: 44 VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPD 103
+P + +Q L I +SL D I V G S A+ G L WG + +
Sbjct: 673 IPQIEDQLLPIKL-ESLTD-----------IVVVSIGFYHSAAVRANGELLTWG---VGE 717
Query: 104 SSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANN 163
G + P + + +V CG +H + L G+ Y+WG++
Sbjct: 718 EGQLGHGDTQNQVEPKVIQSLTSFWITQVQCGEKHTICLTKNGK--------VYTWGSSE 769
Query: 164 NGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
GQLGLGD +P + + + V ++ GS H A+LT+ K FG
Sbjct: 770 YGQLGLGDTTRYCKPMPVTALEK---YNVLQIASGSTHCAVLTNSKE--------VLVFG 818
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
G +G + S +P V L +Y+++ + CG + T+ +S GDV++WG + LG
Sbjct: 819 NG--AAMGAASIIS--IPTLVPSL-KYLHIDKLCCGHYSTAAISECGDVYTWGTGQELGH 873
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
N + + + +A+ + Q Q++CG HT +TD G ++++ G+
Sbjct: 874 GNNQTESTPKLVEAL-------------RNQSIRQISCGGRHTAFLTDSG-RIFTSGKDS 919
Query: 344 SGVLG 348
G LG
Sbjct: 920 FGQLG 924
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 94/205 (45%), Gaps = 41/205 (20%)
Query: 84 SLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTVVKVACGS 136
++ +D + L WG NC L GF + S TP + +F+ + ++ GS
Sbjct: 591 AIHLDTSRGLMTWGSASNCKL-------GFKVASKEQSQPTPERLPNFNVSDICSISSGS 643
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQ-----LGLGDRESRLRPKIIETFNQDSPWA 191
+ AL G+ Y WG + LG+ E +L P +E+
Sbjct: 644 YYSAALTENGD--------VYMWGRGSVKNPPVPVLGIPQIEDQLLPIKLESLTD----- 690
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ V+ G +H+A + R N L T+G+GE GQLGHG TQ+ + P+ ++ L +
Sbjct: 691 IVVVSIGFYHSAAV----RANGEL----LTWGVGEEGQLGHGDTQNQVEPKVIQSLTSF- 741
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
++ V CG HT ++ G V++WG
Sbjct: 742 WITQVQCGEKHTICLTKNGKVYTWG 766
>gi|149033226|gb|EDL88027.1| hect domain and RLD 3 (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 909
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSVNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ + ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY--------TCGVNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISG 305
L Q L V CG +H +++ G ++WG +N G + S
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWG--------------KNSHGQLGLGKEFPSQ 178
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P + + + QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSVNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT L P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLALV----PSS---GLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
>gi|344275071|ref|XP_003409337.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Loxodonta africana]
Length = 1057
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ A I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKS------LADIQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLADIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + PK++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGLDCKKQASPKLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLGL
Sbjct: 121 SEECIRVPRNIKSLAD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGL------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP L+ G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCKKQASPKLLK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|329928889|ref|ZP_08282703.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
gi|328937260|gb|EGG33685.1| regulator of chromosome condensation (RCC1) repeat protein
[Paenibacillus sp. HGF5]
Length = 719
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 70/232 (30%), Positives = 102/232 (43%), Gaps = 39/232 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
K+ G H +LVS+GE YSWG + GQLG G +R P + + N
Sbjct: 37 KLVAGYYHTASLVSSGE--------VYSWGYGDRGQLGDGTWNTRTTPVMAKNLNH---- 84
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++ G + L + WT+G ENGQLG GT + P QV P
Sbjct: 85 -VIDIHSGVRSSMALRQ--------DGTVWTWGANENGQLGIGTITNVNAPAQV---PGL 132
Query: 251 VYLVSVDCGL-FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ ++ GL +H +S G VW+WG G N + T+ SP+L++G
Sbjct: 133 SGIKAISGGLAYHGMALSENGTVWTWGKNDN-GELGNGTTTQQN-----SPVLVAG---- 182
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D +A G +++ + DG +W+WG SG LG G T + P V
Sbjct: 183 ---LSDVTAIAAGGYYSLALKSDG-TVWAWGVNGSGELGDGTTTERHVPVQV 230
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 125/297 (42%), Gaps = 60/297 (20%)
Query: 66 TNHKAPIKI---CSVKA--GGMM--SLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSS 115
TN AP ++ +KA GG+ +A+ G +W WG N L + +T +
Sbjct: 121 TNVNAPAQVPGLSGIKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTT--------T 172
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
SPV V +A G + +AL S D ++WG N +G+LG G R
Sbjct: 173 QQNSPVLVAGLSDVTAIAAGGYYSLALKS--------DGTVWAWGVNGSGELGDGTTTER 224
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P + V + G H+ + + W +G G LG GT
Sbjct: 225 HVPVQVAGLTD-----VMAIAAGGSHSLAIRQ--------DGTVWAWGNNTYGTLGDGTR 271
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNE 293
P QV+ L ++V+V G +H+ V AG+VWSWG ++ LGL NAS
Sbjct: 272 THRTRPVQVRNLQ---HIVAVAGGGYHSLAVDQAGNVWSWGDNSQQQLGLSSNAS----- 323
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
++ P+ ++G + +++ G H+V + DG +W WG G LG G
Sbjct: 324 ---SLIPVPVTG-------IEHVREISAGGFHSVAMKKDG-TVWGWGYNSGGQLGDG 369
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/320 (22%), Positives = 122/320 (38%), Gaps = 57/320 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKV 132
+ + +G S+A+ G +W WG + + + G +++ P+ V G
Sbjct: 85 VIDIHSGVRSSMALRQDGTVWTWG----ANENGQLGIGTITNVNAPAQVPGLSG------ 134
Query: 133 ACGSEHVVALVSAGETYKG----EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +S G Y G E+ ++WG N+NG+LG G + P ++ +
Sbjct: 135 -------IKAISGGLAYHGMALSENGTVWTWGKNDNGELGNGTTTQQNSPVLVAGLSD-- 185
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + G +++ L + W +G+ +G+LG GTT VP QV L
Sbjct: 186 ---VTAIAAGGYYSLALKS--------DGTVWAWGVNGSGELGDGTTTERHVPVQVAGLT 234
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
++++ G H+ + G VW+WG G + + T P+ +
Sbjct: 235 D---VMAIAAGGSHSLAIRQDGTVWAWGNNT-YGTLGDGTRTHR-----TRPVQVR---- 281
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
Q V VA G H+ L D +WSWG LG P P+T
Sbjct: 282 ---NLQHIVAVAGGGYHS-LAVDQAGNVWSWGDNSQQQLGLSSNASSLIPV-----PVTG 332
Query: 369 EFKQDELNTGGLDDEIKTKD 388
E++ GG KD
Sbjct: 333 IEHVREISAGGFHSVAMKKD 352
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 73/181 (40%), Gaps = 32/181 (17%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T P+++ ++ AGG SLAI G +W WGN T G +
Sbjct: 216 LGDGTTTERHVPVQVAGLTDVMAIAAGGSHSLAIRQDGTVWAWGNNTY---GTLGDGTRT 272
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V + +V VA G H +A+ AG +SWG N+ QLGL
Sbjct: 273 HRTRPVQVRNLQ--HIVAVAGGGYHSLAVDQAGN--------VWSWGDNSQQQLGLSSNA 322
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
S L P + V E++ G FH+ + + W +G GQLG G
Sbjct: 323 SSLIPVPVTGIEH-----VREISAGGFHSVAMKK--------DGTVWGWGYNSGGQLGDG 369
Query: 234 T 234
T
Sbjct: 370 T 370
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 58/119 (48%), Gaps = 21/119 (17%)
Query: 59 SLEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
+L D ++T+ P++ I +V GG SLA+D AG +W WG+ +S + G S
Sbjct: 265 TLGDGTRTHRTRPVQVRNLQHIVAVAGGGYHSLAVDQAGNVWSWGD----NSQQQLGLSS 320
Query: 113 -VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
SS P PV V +++ G H VA+ +D + WG N+ GQLG G
Sbjct: 321 NASSLIPVPVTGI--EHVREISAGGFHSVAMK--------KDGTVWGWGYNSGGQLGDG 369
>gi|344275073|ref|XP_003409338.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Loxodonta africana]
Length = 1049
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ A I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKS------LADIQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GLDCKKQASPKLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLADIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + PK++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGLDCKKQASPKLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLGL
Sbjct: 121 SEECIRVPRNIKSLAD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGL------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP L+ G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCKKQASPKLLK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|332841362|ref|XP_003314204.1| PREDICTED: RCC1 and BTB domain-containing protein 2, partial [Pan
troglodytes]
Length = 552
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 88 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 139
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 140 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 189
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 190 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 243
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 244 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 297
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 298 SNQSYPTPV 306
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 105/254 (41%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 157 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 208
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 209 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 257
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG G G N S +P+ +
Sbjct: 258 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVTVE 309
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC + HT G ++ WG RG+S +L T
Sbjct: 310 -------KDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFAC 362
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 363 FATPAVTWRLLSVE 376
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 210 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 263
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 264 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 314
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 315 EI--AACHSTHTS 325
>gi|326506178|dbj|BAJ86407.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 389
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 102/359 (28%), Positives = 152/359 (42%), Gaps = 66/359 (18%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHK---APIKICSVKAGG 81
SL C DG L G N Q T+G P + +S H +KI GG
Sbjct: 52 NSLAICDDGSLFTWGWN--------QRGTLGHPPETKTESSPAHVDALVGVKIVQAAIGG 103
Query: 82 MMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
LA+D+ G + WG C E G + P P V +VA G
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGG 163
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H V L G + +WG GD ++ P ++ Q V +
Sbjct: 164 THSVVLTQEGHVW--------TWGQ----PWPPGDIKNISTPVRVQGLEQ-----VSMIA 206
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G+FH L+ ++ + W +G E GQLG G TQ P +V+ L + LV +
Sbjct: 207 VGAFHNLALS--------VDRILWAWGNNEYGQLGIGDTQPRSQPIRVEGLSN-LSLVDI 257
Query: 257 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPI---LISGNGPHGP 311
G +H++ ++ G+V++WG E G LG + S + P+ L++G
Sbjct: 258 AAGGWHSAALTKEGEVYAWGRGEHGRLGFGDDKS-------SHMVPLQVQLLAG------ 304
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP---AIVLWPPLT 367
+D VQV+CG H+V++T DG +++S+GRG G LG G+ + P I L PP T
Sbjct: 305 --EDIVQVSCGGTHSVVLTSDG-RIFSYGRGDHGRLGDGRKVTTGHPMEVPINLPPPKT 360
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 86/193 (44%), Gaps = 25/193 (12%)
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
+ +WG+ +GQLG+G + + R + I + +AV V GS ++ +
Sbjct: 8 VAVLAWGSGEDGQLGMGGCDEKDRARCICALDA---YAVSAVVAGSRNSLAICD------ 58
Query: 214 MLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ +T+G + G LGH T++ P V L V +V G +H V G
Sbjct: 59 --DGSLFTWGWNQRGTLGHPPETKTESSPAHVDALVG-VKIVQAAIGGWHCLAVDDKGRA 115
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAIS---PILISGNGPHGPKFQDPV-QVACGAAHTVL 328
++WG + G C + + A+ PI P + V QVA G H+V+
Sbjct: 116 YAWGGNE-YGQCGEEPERKEDGTRALRRDIPI------PQRCALKLKVRQVAAGGTHSVV 168
Query: 329 VTDDGYKLWSWGR 341
+T +G+ +W+WG+
Sbjct: 169 LTQEGH-VWTWGQ 180
>gi|432104195|gb|ELK31017.1| RCC1 and BTB domain-containing protein 2 [Myotis davidii]
Length = 526
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 116/250 (46%), Gaps = 32/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 61 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 113 NHGLVPCHIST--NLSNKHVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V G+V+ WG N L
Sbjct: 163 GSTANQPIPRRVTSSLQNKVVVNIACGQMCSMAVVDNGEVYVWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 217 SSGNQSTPCRLA---LQGVRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 269
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 270 SNQSYPTPVV 279
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 82/295 (27%), Positives = 127/295 (43%), Gaps = 56/295 (18%)
Query: 91 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ WG+ L + +T G LV + + + H V++VACGS H + L S GE
Sbjct: 94 GEVFTWGHNAYSQLGNGTTNHG--LVPCHISTNLSNKH---VIEVACGSYHSLVLTSDGE 148
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+ +WG NN+GQ+G G ++ P+ + + Q+ V + CG + +
Sbjct: 149 VF--------AWGYNNSGQVGSGSTANQPIPRRVTSSLQNK--VVVNIACGQMCSMAVV- 197
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
D E W G NGQLG G++ + P ++ Q V + V CG HT V++
Sbjct: 198 -----DNGEVYVW--GYNGNGQLGLGSSGNQSTPCRLA--LQGVRVQRVACGYAHTLVLT 248
Query: 268 SAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
G V++WG + G G N S +P+++ K + AC +
Sbjct: 249 DEGQVYAWGANSYGQLGTGNKSNQSYP--------TPVVVE-------KDRIIEIAACHS 293
Query: 324 AHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEE 369
AHT G ++ WG RG+S VL T FA V W L+ E
Sbjct: 294 AHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHLSCTDDVFACFATPTVSWRLLSVE 348
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 16/107 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
+ ++ G M S+A+ + G +++WG + G L SS S G V +
Sbjct: 183 VVNIACGQMCSMAVVDNGEVYVWG------YNGNGQLGLGSSGNQSTPCRLALQGVRVQR 236
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 237 VACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 275
>gi|334187769|ref|NP_001190338.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005321|gb|AED92704.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1139
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 53/250 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H V + GE++ SWG + G+LG G + PK+I+ N +
Sbjct: 348 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNVQHPKLIDALNTTN 399
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG +H+ +T L +T+G G+ G LGHG S VP++V L
Sbjct: 400 ---IELVACGEYHSCAVT--------LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLM 448
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +++ S+ CG +HT+VV+SAG ++++G + G+ + GD S +
Sbjct: 449 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVLGH--------GDRKSVFI------ 493
Query: 309 HGPKFQDP------VQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGK 351
P+ D V+ ACG HT V + KL++WG G LG G
Sbjct: 494 --PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD 551
Query: 352 TIDFFAPAIV 361
P V
Sbjct: 552 KEPKLVPTCV 561
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 128/290 (44%), Gaps = 32/290 (11%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G S A+ +G L+ WG D G + VS + P V + G V +ACG
Sbjct: 403 VACGEYHSCAVTLSGDLYTWGKG---DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG 459
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GDR+S P+ +++
Sbjct: 460 PYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRKSVFIPREVDSLKG---LRTVRA 508
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ +LGHG + LVP V L +
Sbjct: 509 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 568
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T ++++G V++ G P N D P + +G
Sbjct: 569 F-CQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNPHADGKVPTRV--DGKLHK 618
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + ++ACGA H ++T ++++WG+G +G LG G D +P +V
Sbjct: 619 SFVE--EIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDADDRNSPTLV 665
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G + + +AG L+ +G +G F ++ S F P V
Sbjct: 451 IHVSSIACGPYHTAVVTSAGQLFTFG---------DGTFGVLGHGDRKSVFIPREVDSLK 501
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + +LG GD+E +L P
Sbjct: 502 GLRTVRAACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 558
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT +T G GQLG+
Sbjct: 559 TCVAALVEPN---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGNPHADGK 607
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
VP +V ++ + CG +H +V++S +V++WG KG N L +A D
Sbjct: 608 -VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDADDRN 660
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
SP L+ K + +ACG+ T V W+ G +S G + +F
Sbjct: 661 SPTLV-----ESLKDKQVKSIACGSNFTAAVC---LHKWASGMDQSMCSGCRQPFNF 709
>gi|417405688|gb|JAA49548.1| Putative e3 ubiquitin-protein ligase herc4 [Desmodus rotundus]
Length = 1049
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFSWGQNKYGQLGL--GIDCNKQASPQLIKSLTGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + SWG N GQLGLG D + P++I++ +
Sbjct: 140 VQVACGYYHSLALSKASEVF--------SWGQNKYGQLGLGIDCNKQASPQLIKSL---T 188
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 189 GIPFMQVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 104/252 (41%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLLG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+SWG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFSWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCNKQASPQLIK--SLTGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|73952755|ref|XP_536367.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Canis lupus familiaris]
Length = 1049
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|301755908|ref|XP_002913790.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
3 [Ailuropoda melanoleuca]
Length = 1054
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL-- 362
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Query: 363 WPPLT 367
W P T
Sbjct: 345 WFPYT 349
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|37747571|gb|AAH60033.1| Herc4 protein [Mus musculus]
Length = 1057
Score = 88.6 bits (218), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 112/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQAACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQAACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|302804446|ref|XP_002983975.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
gi|300148327|gb|EFJ14987.1| hypothetical protein SELMODRAFT_119181 [Selaginella moellendorffii]
Length = 435
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 115/270 (42%), Gaps = 46/270 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP--------LPDSSTEGGFSLVSSFTPSPVWDF 124
+I V AGG S A+ +G L+ WG PD EG S + V
Sbjct: 188 RIVHVSAGGSHSAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV--- 244
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
+ V CG +AL +G+ +SWG N N +LG G R + +PK++
Sbjct: 245 ---PIASVYCGGFFTMALTKSGQ--------LWSWGGNANHELGHGTRANNWKPKVVAAL 293
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +V CG FH A LT + T+G G NGQLGHGT ++ P V
Sbjct: 294 EDVT---LVQVACGGFHAAALTQ--------DGKVITWGYGGNGQLGHGTLENGKEPAIV 342
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL-CPNASLTRNEAGDAISPILI 303
+ + + CG T+ ++ GD+++WG + L P + + P+L+
Sbjct: 343 EAMADKT-CTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLK------DEQLDPVLV 395
Query: 304 SGNGPHGPKFQDPVQ---VACGAAHTVLVT 330
P + PV+ V+CGA H V +
Sbjct: 396 --QFPQALHEKTPVEVLGVSCGANHGVCIV 423
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 83/307 (27%), Positives = 127/307 (41%), Gaps = 49/307 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
++ AGG+ ++A+ G ++ WG L S E L+ P D +
Sbjct: 136 RVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYE--RELLPRLLEGPWKD----RI 189
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGAN-NNGQLGLG-----DRESRLRPKIIET 183
V V+ G H A+ +GE Y+WG + G+LG G D + RP ++
Sbjct: 190 VHVSAGGSHSAAVTESGE--------LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA 241
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
D P + V CG F T LT W++G N +LGHGT + P+
Sbjct: 242 L--DVP--IASVYCGGFFTMALTK--------SGQLWSWGGNANHELGHGTRANNWKPKV 289
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V L + V LV V CG FH + ++ G V +WG N L + P ++
Sbjct: 290 VAAL-EDVTLVQVACGGFHAAALTQDGKVITWGYGG------NGQLGHGTLENGKEPAIV 342
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT-GKTIDFFAPAIVL 362
+ +ACG A T +T++G L++WG+ R LG G + P +V
Sbjct: 343 EAMADKTCTY-----IACGPAWTAAITENG-DLYTWGKNRDYQLGIPGLKDEQLDPVLVQ 396
Query: 363 WPPLTEE 369
+P E
Sbjct: 397 FPQALHE 403
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/231 (25%), Positives = 99/231 (42%), Gaps = 34/231 (14%)
Query: 49 EQFLTIGAPDSLEDDSKTN----HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDS 104
E L G PD +++ + + + I SV GG ++A+ +G LW WG ++
Sbjct: 217 EGRLGHGNPDIMDEGALSRPTKVQALDVPIASVYCGGFFTMALTKSGQLWSWGG----NA 272
Query: 105 STEGGF-SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANN 163
+ E G + +++ P V T+V+VACG H AL G+ +WG
Sbjct: 273 NHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGK--------VITWGYGG 324
Query: 164 NGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
NGQLG G E+ P I+E + + CG TA +T D+ +T+G
Sbjct: 325 NGQLGHGTLENGKEPAIVEAMADKT---CTYIACGPAWTAAITEN---GDL-----YTWG 373
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVY------LVSVDCGLFHTSVVSS 268
+ QLG + + + + PQ ++ ++ V CG H + S
Sbjct: 374 KNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVS 424
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 70/303 (23%), Positives = 120/303 (39%), Gaps = 72/303 (23%)
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-----FNQDSP-------- 189
VS+GE +L ++WG +GQ+G G ++ P +I T F +P
Sbjct: 27 VSSGEP---AELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPAK 83
Query: 190 --WAVYEVTCGSFHTALLT-----------------------HRKRPNDMLESM------ 218
VTCG FH+ L ++ N ++ +
Sbjct: 84 PRLGNVGVTCGLFHSVLFAEQDVFVWGKGDGGRLGIDTEFNQYKPYVNPRIKRVQMASAG 143
Query: 219 ------------CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+T+G G G LGHG+ + L+P ++ E P +V V G H++ V
Sbjct: 144 GLHNIALTEVGNVYTWGYGAFGALGHGSYERELLP-RLLEGPWKDRIVHVSAGGSHSAAV 202
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAH 325
+ +G++++WG ++G G + + + G P + P+ V CG
Sbjct: 203 TESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQ-------ALDVPIASVYCGGFF 255
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIK 385
T+ +T G +LWSWG + LG G + + P +V E+ ++ GG
Sbjct: 256 TMALTKSG-QLWSWGGNANHELGHGTRANNWKPKVV---AALEDVTLVQVACGGFHAAAL 311
Query: 386 TKD 388
T+D
Sbjct: 312 TQD 314
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 32/177 (18%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL----------- 253
L R + E W +G G +GQ+GHG+ + +P + L +
Sbjct: 23 LADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPA 82
Query: 254 ------VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
V V CGLFH SV+ + DV+ WG G L + + P +
Sbjct: 83 KPRLGNVGVTCGLFH-SVLFAEQDVFVWGKGDGGRLGIDTEFNQ------YKPYV----- 130
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
P+ + + G H + +T+ G +++WG G G LG G P ++ P
Sbjct: 131 --NPRIKRVQMASAGGLHNIALTEVG-NVYTWGYGAFGALGHGSYERELLPRLLEGP 184
>gi|186524238|ref|NP_197443.3| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332005320|gb|AED92703.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1105
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 113/250 (45%), Gaps = 53/250 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H V + GE++ SWG + G+LG G + PK+I+ N +
Sbjct: 314 VQNIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNVQHPKLIDALNTTN 365
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG +H+ +T L +T+G G+ G LGHG S VP++V L
Sbjct: 366 ---IELVACGEYHSCAVT--------LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLM 414
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +++ S+ CG +HT+VV+SAG ++++G + G+ + GD S +
Sbjct: 415 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVLGH--------GDRKSVFI------ 459
Query: 309 HGPKFQDP------VQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGK 351
P+ D V+ ACG HT V + KL++WG G LG G
Sbjct: 460 --PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD 517
Query: 352 TIDFFAPAIV 361
P V
Sbjct: 518 KEPKLVPTCV 527
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G S A+ +G L+ WG D G + VS + P V + G V +ACG
Sbjct: 369 VACGEYHSCAVTLSGDLYTWGKG---DFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACG 425
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GDR+S P+ +++
Sbjct: 426 PYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRKSVFIPREVDSLKG---LRTVRA 474
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ +LGHG + LVP V L +
Sbjct: 475 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVPTCVAALVEPN 534
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T ++++G V++ G P N D P + G
Sbjct: 535 F-CQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNPHADGKVPTRVDG------ 580
Query: 312 KFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K ++ACGA H ++T ++++WG+G +G LG G D +P +V
Sbjct: 581 KLHKSFVEEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGHGDADDRNSPTLV 631
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 119/297 (40%), Gaps = 51/297 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G + + +AG L+ +G +G F ++ S F P V
Sbjct: 417 IHVSSIACGPYHTAVVTSAGQLFTFG---------DGTFGVLGHGDRKSVFIPREVDSLK 467
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + +LG GD+E +L P
Sbjct: 468 GLRTVRAACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 524
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT +T G GQLG+
Sbjct: 525 TCVAALVEPN---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGNPHADGK 573
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
VP +V ++ + CG +H +V++S +V++WG KG N L +A D
Sbjct: 574 -VPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDADDRN 626
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
SP L+ K + +ACG+ T V W+ G +S G + +F
Sbjct: 627 SPTLV-----ESLKDKQVKSIACGSNFTAAVC---LHKWASGMDQSMCSGCRQPFNF 675
>gi|301755906|ref|XP_002913789.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Ailuropoda melanoleuca]
Length = 1049
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL-- 362
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Query: 363 WPPLT 367
W P T
Sbjct: 345 WFPYT 349
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|270001313|gb|EEZ97760.1| hect domain and RLD 2-like protein [Tribolium castaneum]
Length = 816
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 116/264 (43%), Gaps = 36/264 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V+ GG S AI GAL+ WG + G + TP+ + ++KVA
Sbjct: 569 IIDVECGGTYSAAISANGALYTWGR---GNYGRLGHGTAEDCLTPTMISALSDEHIIKVA 625
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
CGS H + + S G+ Y SWG + G+LG G + P++IE
Sbjct: 626 CGSFYAHTLCITSQGKVY--------SWGDGDYGKLGRGGSDGSKLPRLIEKLQNVK--- 674
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CG+ + L+ + +T+G GE +LGH T ++ PE V E+ +
Sbjct: 675 IVQVYCGAQFSVALSE--------DGHVYTWGKGEGWKLGHPTEENVRFPEMV-EVLRDR 725
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V V G+ H ++ G+V+ WG + +C ++ L + P LI
Sbjct: 726 KVVGVSLGVSHVLALTDQGEVYGWGKNENKQICDSSELFVQQ------PRLI-----EAL 774
Query: 312 KFQDPVQVACGAAHTVLVTDDGYK 335
K Q V V CG A + TDD +
Sbjct: 775 KGQKVVGVCCGPAQSFAWTDDNER 798
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 40/250 (16%)
Query: 118 PSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P + V+K+A E H +AL +D YSWG + G+LG GD ++
Sbjct: 504 PQEMTALDDKEVIKIAAHPEGKHYLALT--------KDYEVYSWGNGDGGRLGHGDTSTK 555
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P +I+ + +V CG ++A ++ N L +T+G G G+LGHGT
Sbjct: 556 EEPTLIQALKGKD---IIDVECGGTYSAAIS----ANGAL----YTWGRGNYGRLGHGTA 604
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLF--HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ L P + L +++ V CG F HT ++S G V+SWG + G L R
Sbjct: 605 EDCLTPTMISALSDE-HIIKVACGSFYAHTLCITSQGKVYSWG-DGDYG-----KLGRGG 657
Query: 294 AGDAISPILISGNGPHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ + P LI K Q+ VQV CGA +V +++DG+ +++WG+G LG
Sbjct: 658 SDGSKLPRLIE-------KLQNVKIVQVYCGAQFSVALSEDGH-VYTWGKGEGWKLGHPT 709
Query: 352 TIDFFAPAIV 361
+ P +V
Sbjct: 710 EENVRFPEMV 719
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 63/167 (37%), Gaps = 33/167 (19%)
Query: 33 GQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS+ S +P +IE+ + KI V G S+A+ G
Sbjct: 651 GKLGRGGSDGSKLPRLIEKLQNV------------------KIVQVYCGAQFSVALSEDG 692
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG + G + + P V VV V+ G HV+AL GE
Sbjct: 693 HVYTWGK---GEGWKLGHPTEENVRFPEMVEVLRDRKVVGVSLGVSHVLALTDQGEV--- 746
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
Y WG N N Q+ +P++IE V V CG
Sbjct: 747 -----YGWGKNENKQICDSSELFVQQPRLIEALKGQK---VVGVCCG 785
>gi|340378681|ref|XP_003387856.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Amphimedon queenslandica]
Length = 599
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 116/275 (42%), Gaps = 36/275 (13%)
Query: 84 SLAIDNAGALWMWGNC-PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
S I G L+ WG P + S+ P V +G +V+VACG H + +
Sbjct: 260 SAVISEDGNLYTWGKAGPFLGYMDD---SVTKQTKPRLVDALYGTRIVQVACGRSHTLVI 316
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G Y S+G N G+LG G ++ +P ++ ++ +V+CG H+
Sbjct: 317 DEEGRVY--------SFGINKFGELGQGHDKAITKPTMVPNL-----VSICKVSCGRHHS 363
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
A + + + + +G G GQLG G +S P V L V CG H
Sbjct: 364 AAIDE--------DGVLFMWGWGARGQLGQGEPKSLFSPTPVNGFNDQP-LEDVSCGYGH 414
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
T+ +++ G + WG + C S E +L SG P Q+ CG
Sbjct: 415 TAAITANGVAYCWG-DNASSQCGVPSSVYGELSSPRGIVLPSG--------IRPTQINCG 465
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
A TVLVT G +L++WG SG LG G+ F+
Sbjct: 466 ANFTVLVTSIG-QLFTWGCNMSGQLGNGEAKKTFS 499
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 118/282 (41%), Gaps = 45/282 (15%)
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
L DN+ L++WG D G F P+ V G V +ACG H +AL S
Sbjct: 156 LLKDNSCDLYLWGG---GDRGRLGHKDDKPRFLPNVVESLLGQNVTMIACGGSHTIALNS 212
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
G+ +SWGA G LG G+ R P +I+ +D V V C H+A+
Sbjct: 213 KGQV--------FSWGAGPQGCLGHGNLRDRYSPLMIDGPLRDV--NVVHVACYENHSAV 262
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY---LVSVDCGLF 261
++ + G+ G G ++ + L +Y +V V CG
Sbjct: 263 ISEDGN----------LYTWGKAGPF-LGYMDDSVTKQTKPRLVDALYGTRIVQVACGRS 311
Query: 262 HTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
HT V+ G V+S+G+ K LG + ++T+ P ++ P +V
Sbjct: 312 HTLVIDEEGRVYSFGINKFGELGQGHDKAITK--------PTMV-------PNLVSICKV 356
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+CG H+ + +DG L+ WG G G LG G+ F+P V
Sbjct: 357 SCGRHHSAAIDEDGV-LFMWGWGARGQLGQGEPKSLFSPTPV 397
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 37/226 (16%)
Query: 62 DDSKTNHKAP--------IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
DDS T P +I V G +L ID G ++ +G + +G +
Sbjct: 283 DDSVTKQTKPRLVDALYGTRIVQVACGRSHTLVIDEEGRVYSFGINKFGELG-QGHDKAI 341
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ T P + ++ KV+CG H A+ ED V + WG GQLG G+ +
Sbjct: 342 TKPTMVP----NLVSICKVSCGRHHSAAI--------DEDGVLFMWGWGARGQLGQGEPK 389
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
S P + FN D P + +V+CG HTA +T + CW G+N G
Sbjct: 390 SLFSPTPVNGFN-DQP--LEDVSCGYGHTAAITANG------VAYCW----GDNASSQCG 436
Query: 234 TTQSA---LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
S L + LP + ++CG T +V+S G +++WG
Sbjct: 437 VPSSVYGELSSPRGIVLPSGIRPTQINCGANFTVLVTSIGQLFTWG 482
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 86/205 (41%), Gaps = 32/205 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ IC V G S AID G L+MWG G S F+P+PV F+ +
Sbjct: 351 VSICKVSCGRHHSAAIDEDGVLFMWG---WGARGQLGQGEPKSLFSPTPVNGFNDQPLED 407
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-----GDRESRLRPKIIETFNQ 186
V+CG H A+ + G V Y WG N + Q G+ G+ S P+ I +
Sbjct: 408 VSCGYGHTAAITANG--------VAYCWGDNASSQCGVPSSVYGELSS---PRGIVLPSG 456
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV-PEQVK 245
P ++ CG+ T L+T + +T+G +GQLG+G + P V+
Sbjct: 457 IRP---TQINCGANFTVLVTSIGQ--------LFTWGCNMSGQLGNGEAKKTFSQPMPVE 505
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAG 270
L + + V CG H + G
Sbjct: 506 SLSEK-RVKMVACGEDHIGCLVGHG 529
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q+ +ACG +HT+ + G +++SWG G G LG G D ++P ++ P
Sbjct: 195 QNVTMIACGGSHTIALNSKG-QVFSWGAGPQGCLGHGNLRDRYSPLMIDGP 244
>gi|440230900|ref|YP_007344693.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
gi|440052605|gb|AGB82508.1| RCC1 domain-containing protein, alpha-tubulin suppressor [Serratia
marcescens FGI94]
Length = 1812
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
S +G S AID+ G LW WG ++ + D + +V +A
Sbjct: 1487 ISTGSGASRSQAIDDQGRLWAWG------------YNFAGALGDGTGIDRNRPVLVDLAS 1534
Query: 135 GSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V V+AG + + ++WG N +GQLG G R + P I+ P A
Sbjct: 1535 LGSSKVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQV--DLEPLA 1592
Query: 192 VYEVT---CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
VT G FH+ +L R W +G + G+LG GTT P V LP
Sbjct: 1593 GSTVTGVWAGDFHSIILDDLGR--------LWVWGKNKYGELGDGTTTYQTRPVLVDLLP 1644
Query: 249 -QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+++V G HT + G +W+WG+ L ++ R+ P+ +
Sbjct: 1645 LNGRKVMAVSAGEHHTVALDEQGGLWAWGLNDSGRLGDGSTTDRHR------PVQVDLTS 1698
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
G K V ++ G +TV + + G +LW+WG SG+LG G TI+ P V PL
Sbjct: 1699 LDGHKV---VAISAGGWNTVALDELG-RLWAWGPNESGLLGDGTTINQHRPVQVDLTPL 1753
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 128/297 (43%), Gaps = 47/297 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPD-SSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ AG + SL +DN +W WG + L D ++ + +++ TP G TVV +
Sbjct: 1433 MAAGSLHSLILDNKDRIWSWGFNRDGMLGDGTNRDRTRPVLTDLTP-----LGGSTVVSI 1487
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ GS A S +G ++WG N G LG G R RP +++ + S V
Sbjct: 1488 STGSG---ASRSQAIDDQGR---LWAWGYNFAGALGDGTGIDRNRPVLVDLASLGSS-KV 1540
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL--VPEQVKELPQY 250
V G +H +L + R W +G +GQLG GT + +P QV P
Sbjct: 1541 TAVAAGRYHNLVLDDQSR--------LWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPLA 1592
Query: 251 VYLVS-VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS-----PILIS 304
V+ V G FH+ ++ G +W WG K E GD + P+L+
Sbjct: 1593 GSTVTGVWAGDFHSIILDDLGRLWVWGKNK-----------YGELGDGTTTYQTRPVLVD 1641
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+G K + V+ G HTV + + G LW+WG SG LG G T D P V
Sbjct: 1642 LLPLNGRKV---MAVSAGEHHTVALDEQG-GLWAWGLNDSGRLGDGSTTDRHRPVQV 1694
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 103/237 (43%), Gaps = 45/237 (18%)
Query: 60 LEDDSKTNHKAPIKI------------CSVKAGGMMSLAIDNAGALWMWGNCP---LPDS 104
L D ++TN P+ I V AG S+ +D+ G LW+WG L D
Sbjct: 1570 LGDGTRTNVAYPLPIQVDLEPLAGSTVTGVWAGDFHSIILDDLGRLWVWGKNKYGELGDG 1629
Query: 105 STEGGFSLVSSFTPSPVW----DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWG 160
+T ++ PV +G V+ V+ G H VAL G ++WG
Sbjct: 1630 TT--------TYQTRPVLVDLLPLNGRKVMAVSAGEHHTVALDEQGG--------LWAWG 1673
Query: 161 ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N++G+LG G R RP ++ + D V ++ G ++T L R W
Sbjct: 1674 LNDSGRLGDGSTTDRHRPVQVDLTSLDG-HKVVAISAGGWNTVALDELGR--------LW 1724
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+G E+G LG GTT + P QV P +V+V G F+ VV G++W+WG
Sbjct: 1725 AWGPNESGLLGDGTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGELWAWG 1781
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 123/294 (41%), Gaps = 35/294 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMW---GNCPLPDSS-TEGGFSLVSSFTPSPVWDFHGHT 128
K+ +V AG +L +D+ LW W G+ L D + T + L P+ G T
Sbjct: 1539 KVTAVAAGRYHNLVLDDQSRLWAWGHNGDGQLGDGTRTNVAYPLPIQVDLEPL---AGST 1595
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V G H + L G + WG N G+LG G + RP +++ +
Sbjct: 1596 VTGVWAGDFHSIILDDLGR--------LWVWGKNKYGELGDGTTTYQTRPVLVDLLPLNG 1647
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V V+ G HT L + W +GL ++G+LG G+T P QV
Sbjct: 1648 R-KVMAVSAGEHHTVALDE--------QGGLWAWGLNDSGRLGDGSTTDRHRPVQVDLTS 1698
Query: 249 QYVY-LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ +V++ G ++T + G +W+WG + L ++ ++ P+ +
Sbjct: 1699 LDGHKVVAISAGGWNTVALDELGRLWAWGPNESGLLGDGTTINQHR------PVQVDLTP 1752
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+G K V V+ G+ + +V D G +LW+WG G LG G P V
Sbjct: 1753 LNGRKV---VAVSAGSFYFFVVDDRG-ELWAWGSNSYGQLGDGTKTRRLKPVRV 1802
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 60 LEDDSKTNHKAPI----------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
L D S T+ P+ K+ ++ AGG ++A+D G LW WG +S G
Sbjct: 1680 LGDGSTTDRHRPVQVDLTSLDGHKVVAISAGGWNTVALDELGRLWAWGPN---ESGLLGD 1736
Query: 110 FSLVSSFTPSPV--WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
+ ++ P V +G VV V+ GS + + GE ++WG+N+ GQL
Sbjct: 1737 GTTINQHRPVQVDLTPLNGRKVVAVSAGSFYFFVVDDRGE--------LWAWGSNSYGQL 1788
Query: 168 GLGDRESRLRPKIIE 182
G G + RL+P ++
Sbjct: 1789 GDGTKTRRLKPVRVD 1803
>gi|301755904|ref|XP_002913788.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Ailuropoda melanoleuca]
gi|281346973|gb|EFB22557.1| hypothetical protein PANDA_001627 [Ailuropoda melanoleuca]
Length = 1057
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 134/305 (43%), Gaps = 52/305 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL-- 362
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGN 344
Query: 363 WPPLT 367
W P T
Sbjct: 345 WFPYT 349
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|73952739|ref|XP_849808.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Canis lupus familiaris]
Length = 1057
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|12856817|dbj|BAB30794.1| unnamed protein product [Mus musculus]
Length = 913
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSVNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ + ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY--------TCGVNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISG 305
L Q L V CG +H +++ G ++WG +N G + S
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWG--------------KNSHGQLGLGKEFPSQ 178
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P + + + QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSVNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT L P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLALV----PSS---GLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
>gi|66826123|ref|XP_646416.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60474380|gb|EAL72317.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 2044
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 117/275 (42%), Gaps = 41/275 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV G A+ G L WG + ++ G + P + + +V
Sbjct: 806 VVSVSIGFCHGAAVRANGELLTWG---VGENGQLGHGDTNNQIEPKIIQSLTSFWITQVQ 862
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG +H + L G+ YSWGA+ GQLGLGD P + + + V
Sbjct: 863 CGEKHTICLTKNGK--------VYSWGASEYGQLGLGDVTQHSSPMQVSALEK---YNVL 911
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ GS H A+LT K FG G G +P V L +Y+++
Sbjct: 912 QIASGSTHCAVLTTSKE--------VLVFGNGA----AMGAASVVSLPTLVPSL-KYLHI 958
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG + T+ ++ GDV++WG + LG N++ T SP LI +
Sbjct: 959 DRLCCGHYSTAAITECGDVYTWGTGQELGHGGNSTET--------SPKLI-----EALRN 1005
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
Q Q++CG HT +TD G ++++ G+ G LG
Sbjct: 1006 QSIRQISCGGRHTAFLTDSG-RIFTCGKDSFGQLG 1039
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/302 (25%), Positives = 126/302 (41%), Gaps = 67/302 (22%)
Query: 84 SLAIDNAGALWMWG---NCPLPDSSTEGGFSLV----SSFTPSPVWDFHGHTVVKVACGS 136
++ +D + L WG NC L GF + S TP + +F+ + ++ GS
Sbjct: 706 AIHLDTSRGLMTWGSASNCKL-------GFKVTAKDQSQPTPERLPNFNIPDICSISSGS 758
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQ---LGLGDRESRLRPKIIETFNQDSPWAVY 193
+ L G+ Y + GA LG+ E +L P +E+ + V
Sbjct: 759 YYSSVLTENGDVY------LWGRGAVKTPAVPILGIPQIEDQLLPFKLESLSD-----VV 807
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V+ G H A + R N L T+G+GENGQLGHG T + + P+ ++ L + ++
Sbjct: 808 SVSIGFCHGAAV----RANGEL----LTWGVGENGQLGHGDTNNQIEPKIIQSLTSF-WI 858
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPH 309
V CG HT ++ G V+SWG + GLG + SP+ +S +
Sbjct: 859 TQVQCGEKHTICLTKNGKVYSWGASEYGQLGLG----------DVTQHSSPMQVSALEKY 908
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 369
+ +Q+A G+ H ++T L V G G + A ++V P L
Sbjct: 909 -----NVLQIASGSTHCAVLTTSKEVL---------VFGNGAAMG--AASVVSLPTLVPS 952
Query: 370 FK 371
K
Sbjct: 953 LK 954
>gi|431911482|gb|ELK13688.1| Putative E3 ubiquitin-protein ligase HERC3 [Pteropus alecto]
Length = 1017
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 139/297 (46%), Gaps = 48/297 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHT 128
I V G SLA+ + G L+ WG + ++G L+++ P + + T
Sbjct: 132 NIVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQT 185
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
+++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 186 ILQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EG 236
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 237 IPLA--QVAAGGAHSFALS--------LSGAVFAWGMNNAGQLGLSDEEDRESPCHVK-L 285
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILIS 304
+ +V + CG HT+V++ +G V+++G G C L + D ++P + +
Sbjct: 286 LRTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELM 339
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 340 GS--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 388
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 46/242 (19%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 81 RSVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQ 131
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVK 245
+ + V CG H+ L+ R + +++G G +GQLG TT+ S VP ++
Sbjct: 132 N----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQ 179
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAIS 299
+L Q L V CG +H +++ G ++WG + GLG AS R + + I
Sbjct: 180 KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI- 237
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+ QVA G AH+ ++ G +++WG +G LG D +P
Sbjct: 238 PL---------------AQVAAGGAHSFALSLSG-AVFAWGMNNAGQLGLSDEEDRESPC 281
Query: 360 IV 361
V
Sbjct: 282 HV 283
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 237 IPLAQVAAGGAHSFALSLSGAVFAWG---MNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 293
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPW 190
++CG EH L +G +++GA + GQLG + P +++E +
Sbjct: 294 ISCGEEHTAVLTKSGGV--------FTFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 342
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 343 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 389
>gi|440796629|gb|ELR17738.1| ubiquitin ligase, putative [Acanthamoeba castellanii str. Neff]
Length = 1287
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 131/329 (39%), Gaps = 68/329 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSST----EGGFSL--------VSSFTP 118
+ S+ AGG S + G L+ +G L + EGG +L S F P
Sbjct: 665 VVSIAAGGYHSALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQP 724
Query: 119 SP--VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
P + +G V +VACG H + G Y+WG NGQLG GD +
Sbjct: 725 KPTRLSALNGQVVKQVACGRFHSACVTEEG--------ALYTWGRGANGQLGHGDMTDQA 776
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-- 234
PK +E +D + +V CG H+A + + +T G E+GQLG G
Sbjct: 777 TPKRVEAGIKDK--IMVKVACGENHSAAVDS--------AGVIYTTGGDESGQLGKGDEW 826
Query: 235 --------------TQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +P + L ++V V + CG + +++ G +++WG
Sbjct: 827 ICATHGEGCTGSGWSCQERIPTFLSILSVRHVQFVDIACGHGFCAAITNRGLLYTWGKGT 886
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
LGL P+ GD P H V VACG H +TD G +L+ W
Sbjct: 887 ALGLGPS--------GDVSEPT-------HLSSIDGVVSVACGDIHAAALTDKG-QLYMW 930
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
G +G LG G++ + L P +
Sbjct: 931 GSSEAGRLGDGRSTEGVTRTPKLVPAFAD 959
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/355 (25%), Positives = 137/355 (38%), Gaps = 60/355 (16%)
Query: 32 DGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG LG +G L P IE + +++ V AG SL +
Sbjct: 577 DGVLGHTGGIEQLWPLAIESL------------------SSVQVKMVAAGEFHSLCLTEN 618
Query: 91 GALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVW---DFHGHTVVKVACGSEHVVAL 142
G + +G C P + L + P P+ D TVV +A G H +
Sbjct: 619 GEVTSFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKTVVSIAAGGYHSALV 678
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSP--------WAVY 193
+ GE Y + G + LG G R +T + Q P V
Sbjct: 679 TADGELYTFGRGGEFQLGHDTVMALGEGGNALHYRSNSAQTSYFQPKPTRLSALNGQVVK 738
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V CG FH+A +T E +T+G G NGQLGHG P++V+ + +
Sbjct: 739 QVACGRFHSACVTE--------EGALYTWGRGANGQLGHGDMTDQATPKRVEAGIKDKIM 790
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS----------PILI 303
V V CG H++ V SAG +++ G ++ L G+ + P +
Sbjct: 791 VKVACGENHSAAVDSAGVIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQERIPTFL 850
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
S +F V +ACG +T+ G L++WG+G + LG G + D P
Sbjct: 851 SILSVRHVQF---VDIACGHGFCAAITNRGL-LYTWGKGTA--LGLGPSGDVSEP 899
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 102/230 (44%), Gaps = 45/230 (19%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
SWGAN++G LG +L P IE+ S V V G FH+ LT
Sbjct: 571 SWGANSDGVLGHTGGIEQLWPLAIESL---SSVQVKMVAAGEFHSLCLTENGEVT----- 622
Query: 218 MCWTFGLGENGQLGHGTTQSA--------------LVPEQVKELPQYVYLVSVDCGLFHT 263
+FGL + GQ G T+ A ++P+ +++ +VS+ G +H+
Sbjct: 623 ---SFGLNDQGQCGQPITKIAESSDLAAVARPRPIVLPDDLRKKT----VVSIAAGGYHS 675
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ-DPV----- 317
++V++ G+++++G L + + E G+A+ N FQ P
Sbjct: 676 ALVTADGELYTFGRGGEFQLGHDTVMALGEGGNALH---YRSNSAQTSYFQPKPTRLSAL 732
Query: 318 ------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QVACG H+ VT++G L++WGRG +G LG G D P V
Sbjct: 733 NGQVVKQVACGRFHSACVTEEG-ALYTWGRGANGQLGHGDMTDQATPKRV 781
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 100/266 (37%), Gaps = 55/266 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
+ V G S + GAL+ WG + G + TP V +VKV
Sbjct: 737 VKQVACGRFHSACVTEEGALYTWGRGA---NGQLGHGDMTDQATPKRVEAGIKDKIMVKV 793
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-----------------ESR 175
ACG H A+ SAG V Y+ G + +GQLG GD + R
Sbjct: 794 ACGENHSAAVDSAG--------VIYTTGGDESGQLGKGDEWICATHGEGCTGSGWSCQER 845
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+ P + + V ++ CG A +T+R + +T+G G LG G +
Sbjct: 846 I-PTFLSILSVRHVQFV-DIACGHGFCAAITNR--------GLLYTWGKGT--ALGLGPS 893
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
P + + +VSV CG H + ++ G ++ WG + L R+ G
Sbjct: 894 GDVSEPTHLSSIDG---VVSVACGDIHAAALTDKGQLYMWGSSEAGRLGDG----RSTEG 946
Query: 296 DAISPILISGNGPHGPKFQDPVQVAC 321
+P L+ P F D Q C
Sbjct: 947 VTRTPKLV-------PAFADIHQARC 965
>gi|330798916|ref|XP_003287495.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
gi|325082514|gb|EGC35994.1| hypothetical protein DICPUDRAFT_151599 [Dictyostelium purpureum]
Length = 1935
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 91/356 (25%), Positives = 144/356 (40%), Gaps = 74/356 (20%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV---------WD 123
KI ++ AG ++ + +G L+ +G D G S S P+ +
Sbjct: 1231 KIQAIAAGFAHNIVLKKSGELFSFG---YGDFGQLGTGSFHSKNIPTRIEINAIMGGLQH 1287
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
G + ++ACG H V GE YSWG GQLG E+ +P++IET
Sbjct: 1288 HDGGKITQIACGFGHSVICSENGE--------VYSWGLGKQGQLGHKVFENISKPRLIET 1339
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
V +++CG FHT T K +++G GE+ +LGH + + VP+
Sbjct: 1340 LR-----GVTKISCGHFHTVATTDLKN--------VYSWGSGEHMKLGHSSDKDESVPKV 1386
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V Q + V CG HT ++ D+ + + N G + SPI
Sbjct: 1387 VDFFIQK-NVSKVVCGQNHTMTITFPDDLNNSNQDD--------EDEENMNGKSSSPIYA 1437
Query: 304 SGNGPHG----------PKFQDPV-------------QVACGAAHTVLVTDDGYKLWSWG 340
G+ HG P F P+ ++CG+ + ++T + ++ WG
Sbjct: 1438 WGSAEHGKLGLGGDLKSPFFDKPIPTAIKGVNSLNLIDISCGSDFSAMITSNN-AIYVWG 1496
Query: 341 RGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGL--DDEIKTKDLEGAEE 394
GR G +G GK D + P + T+ N GGL D++ + EG EE
Sbjct: 1497 CGRFGQIGNGKNDDVWVPTRISLNDSTKP------NFGGLQADNKKQRYSQEGLEE 1546
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/334 (26%), Positives = 142/334 (42%), Gaps = 68/334 (20%)
Query: 58 DSLEDDSKTNHK------------APIK----ICSVKAGGMMSLAIDNAGALWMWGNCPL 101
D +D++K NHK AP+K V G I + G L+ WG+
Sbjct: 1092 DISDDETKINHKIRIDPELKRFPMAPLKNEKKAIKVSCGWDHIAVITDDGELYTWGS--- 1148
Query: 102 PDSSTEGGFSLVSSFT---PSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCY 157
+ S + G L + T P V F G + + V CG EH +A+ S + Y
Sbjct: 1149 -NQSGQLGHGLEVNKTLSLPKRVDFFRGKSPIFMVECGGEHTIAVDS--------NYFVY 1199
Query: 158 SWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
SWG++ GQLG G + ++ RPK+IE + + + G H +L K+ ++
Sbjct: 1200 SWGSDKFGQLGHGTKAVNQSRPKVIEEL---TGQKIQAIAAGFAHNIVL---KKSGEL-- 1251
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV---------YLVSVDCGLFHTSVVS 267
++FG G+ GQLG G+ S +P ++ E+ + + + CG H+ + S
Sbjct: 1252 ---FSFGYGDFGQLGTGSFHSKNIPTRI-EINAIMGGLQHHDGGKITQIACGFGHSVICS 1307
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
G+V+SWG+ K L + P LI + +++CG HTV
Sbjct: 1308 ENGEVYSWGLGK------QGQLGHKVFENISKPRLIE-------TLRGVTKISCGHFHTV 1354
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
TD ++SWG G LG D P +V
Sbjct: 1355 ATTDLK-NVYSWGSGEHMKLGHSSDKDESVPKVV 1387
>gi|334183781|ref|NP_177129.2| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
gi|332196844|gb|AEE34965.1| regulator of chromosome condensation and FYVE zinc finger
domain-containing protein [Arabidopsis thaliana]
Length = 1041
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 138/319 (43%), Gaps = 55/319 (17%)
Query: 65 KTNHKAPIKICSVKAGGMMSLA--------IDNAGALWMWG----NCPLPDSSTEGGFSL 112
+T+ + P I SV+ G SLA I +G L+ WG N L E
Sbjct: 337 ETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNES---- 392
Query: 113 VSSFTPSPVW-DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
S + P V D G V VACG H + S+G+ +++G G LG GD
Sbjct: 393 -SCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQ--------LFTFGDGTFGALGHGD 443
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH-----RKRPNDMLESMCWTFGLGE 226
R S P+ +E+ V +V CG +HTA + + D +T+G GE
Sbjct: 444 RRSTSVPREVESL---IGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGE 500
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
GQLGHG + L+PE V L + V CG T +S G V++ G
Sbjct: 501 KGQLGHGDNDTKLLPECVISLTNE-NICQVACGHSLTVSRTSRGHVYTMG---------- 549
Query: 287 ASLTRNEAGDAISPILISGNGP---HGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRG 342
S + G+ + GN P G + V ++ACG+ H ++T ++++WG+G
Sbjct: 550 -STAYGQLGNPTA----KGNFPERVEGDIVEASVEEIACGSYHVAVLTSKS-EIYTWGKG 603
Query: 343 RSGVLGTGKTIDFFAPAIV 361
+G LG G + PA+V
Sbjct: 604 LNGQLGHGNVENKREPAVV 622
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 87 IDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVV----KVACGSEHVVA 141
D G +++WG + D G G SL S+ + + T+V +ACG H V
Sbjct: 256 FDALGDVFVWGES-ISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVL 314
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ GE + SWG G+LG G +PK I + + CG FH
Sbjct: 315 VTKQGEIF--------SWGEGKGGKLGHGLETDAQKPKFISSVRG---LGFKSLACGDFH 363
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T + D+ W G LGHG S +P++V Q +Y+ V CG +
Sbjct: 364 TCAIT---QSGDLYS---WGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPW 417
Query: 262 HTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
HT+VV+S+G ++++ G LG S + +++ ++++ +V
Sbjct: 418 HTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVT-------------KV 464
Query: 320 ACGAAHT---VLVTDDGY---------KLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
ACG HT V VT++ ++++WG G G LG G P V+
Sbjct: 465 ACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI 519
>gi|348529614|ref|XP_003452308.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Oreochromis
niloticus]
Length = 1004
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 73/241 (30%), Positives = 105/241 (43%), Gaps = 37/241 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL----VSSFTPSPVWDFHGHT 128
+I V G +A+ G L+ WG +T G L S P P+ G
Sbjct: 137 RISQVMCGNQHCVALSRDGQLFTWGQ------NTSGQLGLGKGEPSKLFPHPLKSLAGIP 190
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ ++ G +H AL +G + WG N GQLGL D++ R P I+
Sbjct: 191 LAQITAGGDHSFALSLSG--------AVFGWGKNRAGQLGLNDKQDRAVPCHIKFLRSQK 242
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V ++CG HTA LT + +TFG G GQLGHG+T S L+P +V EL
Sbjct: 243 ---VVYISCGDEHTAALTK--------DGGLFTFGDGSWGQLGHGSTNSELLPRRVLEL- 290
Query: 249 QYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + CG HT + V S+G V+++G + L GDA SP + +
Sbjct: 291 MGTEVSQIACGRHHTLAFVPSSGVVYAFGCNS------HGQLGTGILGDARSPFPVKTSV 344
Query: 308 P 308
P
Sbjct: 345 P 345
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 132/309 (42%), Gaps = 52/309 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 131
KI V G S+A++ G L+ WG D G G + + P V H + +
Sbjct: 84 KITMVSCGRGHSMAVNEQGQLFAWGAG---DGGQLGLGTTETTVRIPRLVKRLCDHRISQ 140
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPW 190
V CG++H VAL G+ ++WG N +GQLGLG E S+L P +++ P
Sbjct: 141 VMCGNQHCVALSRDGQ--------LFTWGQNTSGQLGLGKGEPSKLFPHPLKSL-AGIPL 191
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A ++T G H+ L+ L + +G GQLG Q VP +K L +
Sbjct: 192 A--QITAGGDHSFALS--------LSGAVFGWGKNRAGQLGLNDKQDRAVPCHIKFL-RS 240
Query: 251 VYLVSVDCGLFHTSVVSSAGDVW-----SWGMEKGLGLCPNASLTRNE---AGDAISPIL 302
+V + CG HT+ ++ G ++ SWG + G G + L R G +S
Sbjct: 241 QKVVYISCGDEHTAALTKDGGLFTFGDGSWG-QLGHGSTNSELLPRRVLELMGTEVS--- 296
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q+ACG HT+ ++++G G LGTG D +P V
Sbjct: 297 ---------------QIACGRHHTLAFVPSSGVVYAFGCNSHGQLGTGILGDARSPFPVK 341
Query: 363 WPPLTEEFK 371
+E+F+
Sbjct: 342 TSVPSEDFR 350
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/314 (26%), Positives = 121/314 (38%), Gaps = 76/314 (24%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY------ 149
WGN D G F P F G + +V CG +H V L+ G Y
Sbjct: 4 WGNAK--DGQLGIGVEKNPVFEPRNCHVFSGRGLKEVGCGGQHSVFLMHDGSVYTCGSNS 61
Query: 150 ------------------------------KGEDLVC------YSWGANNNGQLGLGDRE 173
+G + ++WGA + GQLGLG E
Sbjct: 62 CGQLGHDKAGISPEVVGALDTQKITMVSCGRGHSMAVNEQGQLFAWGAGDGGQLGLGTTE 121
Query: 174 SRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ +R P++++ + +V CG+ H L+ + +T+G +GQLG
Sbjct: 122 TTVRIPRLVKRLCDHR---ISQVMCGNQHCVALSR--------DGQLFTWGQNTSGQLGL 170
Query: 233 GTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G + S L P +K L + L + G H+ +S +G V+ WG + L
Sbjct: 171 GKGEPSKLFPHPLKSLAG-IPLAQITAGGDHSFALSLSGAVFGWGKNRA------GQLGL 223
Query: 292 NEAGDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
N+ D P I KF Q V ++CG HT +T DG L+++G G G LG
Sbjct: 224 NDKQDRAVPCHI--------KFLRSQKVVYISCGDEHTAALTKDG-GLFTFGDGSWGQLG 274
Query: 349 TGKTIDFFAPAIVL 362
G T P VL
Sbjct: 275 HGSTNSELLPRRVL 288
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 76/178 (42%), Gaps = 25/178 (14%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHT 128
A I + + AGG S A+ +GA++ WG + + + G + P +
Sbjct: 187 AGIPLAQITAGGDHSFALSLSGAVFGWGK----NRAGQLGLNDKQDRAVPCHIKFLRSQK 242
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQD 187
VV ++CG EH AL G +++G + GQLG G S L P +++E +
Sbjct: 243 VVYISCGDEHTAALTKDGG--------LFTFGDGSWGQLGHGSTNSELLPRRVLELMGTE 294
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG +GQLG G A P VK
Sbjct: 295 ----VSQIACGRHHTLAFV----PSS---GVVYAFGCNSHGQLGTGILGDARSPFPVK 341
>gi|291401438|ref|XP_002717008.1| PREDICTED: hect domain and RLD 3 [Oryctolagus cuniculus]
Length = 1504
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 540 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 593
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 594 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 644
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 645 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLL- 693
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 694 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 747
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 748 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 795
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 40/239 (16%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 488 RSVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQ 538
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVK 245
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP ++
Sbjct: 539 H----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQ 586
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPN-ASLTRNEAGDAISPIL 302
+L Q L V CG +H +++ G ++WG LGL S T + ++ I
Sbjct: 587 KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIP 645
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 646 LA-------------QVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 690
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 644 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 700
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 701 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 749
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 750 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 796
>gi|157820833|ref|NP_001102101.1| probable E3 ubiquitin-protein ligase HERC3 [Rattus norvegicus]
gi|149033223|gb|EDL88024.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033224|gb|EDL88025.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
gi|149033225|gb|EDL88026.1| hect domain and RLD 3 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 1050
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSVNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ + ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY--------TCGVNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISG 305
L Q L V CG +H +++ G ++WG +N G + S
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWG--------------KNSHGQLGLGKEFPSQ 178
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P + + + QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSVNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT L P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLALV----PSS---GLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
>gi|297810989|ref|XP_002873378.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
gi|297319215|gb|EFH49637.1| hypothetical protein ARALYDRAFT_487713 [Arabidopsis lyrata subsp.
lyrata]
Length = 434
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 125/303 (41%), Gaps = 44/303 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVV 130
I + AG S AI G L+MWG +SS + G ++ P+ V HG T+
Sbjct: 136 ILHISAGYYHSAAITVDGELYMWGK----NSSGQLGLGKKAARVVRVPTKVEALHGITIQ 191
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL-GLGDRESRLRPKIIETFNQDSP 189
VA GSEH VA+ GE G + L G+ S P++I+
Sbjct: 192 SVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIKELE---G 248
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V G H+A + FG ++G G ++A P + E+P
Sbjct: 249 IKVKNVAAGLLHSACTDE--------NGSAFMFGERSINKMGFGGVRNATTPSIISEVP- 299
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
Y V CG +HT VV+ G++++WG + N L + + SP+ +
Sbjct: 300 --YAEGVACGGYHTCVVTRGGELYTWGSNE------NGCLGTDSTYVSHSPVRV-----E 346
Query: 310 GPKFQDPV-QVACGAAHTVLVTDDGYKLWSW----------GRGRSGVLGTGKTIDFFAP 358
GP + V QV+CG HT ++D+ W W G G LG G +D+ P
Sbjct: 347 GPFLESTVSQVSCGWKHTAAISDNKVFTWGWGGSHGTFSVDGHSSGGQLGHGSDVDYARP 406
Query: 359 AIV 361
A+V
Sbjct: 407 AMV 409
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 103/251 (41%), Gaps = 37/251 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--PKIIETFNQ 186
++ ++ G H A+ GE Y WG N++GQLGLG + +R+ P +E +
Sbjct: 136 ILHISAGYYHSAAITVDGELYM--------WGKNSSGQLGLGKKAARVVRVPTKVEALHG 187
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL-GHGTTQSALVPEQVK 245
+ + V GS H+ +T G G L G + S P +K
Sbjct: 188 IT---IQSVALGSEHSVAVTDGGEVLSWGGGGSGRLGHGHQSSLFGILRSNSEFTPRLIK 244
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPI 301
EL + + + +V GL H++ G + +G G G NA+ +P
Sbjct: 245 EL-EGIKVKNVAAGLLHSACTDENGSAFMFGERSINKMGFGGVRNAT----------TPS 293
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+IS + VACG HT +VT G +L++WG +G LGT T +P V
Sbjct: 294 IIS-------EVPYAEGVACGGYHTCVVTRGG-ELYTWGSNENGCLGTDSTYVSHSPVRV 345
Query: 362 LWPPLTEEFKQ 372
P L Q
Sbjct: 346 EGPFLESTVSQ 356
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 81/178 (45%), Gaps = 27/178 (15%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG+ + G+LGLG+ +S+ P + S + V CG HT LT +R
Sbjct: 54 WGSGDYGRLGLGNLDSQWTPAGCSALSDHS---IRAVACGGAHTLFLTETRR-------- 102
Query: 219 CWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+ GL + GQLG +S A+ P +V L + + +S G +H++ ++ G+++ WG
Sbjct: 103 VFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKDILHISA--GYYHSAAITVDGELYMWGK 160
Query: 278 EKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
LGL A+ + + HG Q VA G+ H+V VTD G
Sbjct: 161 NSSGQLGLGKKAA--------RVVRVPTKVEALHGITIQ---SVALGSEHSVAVTDGG 207
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 84/181 (46%), Gaps = 27/181 (14%)
Query: 95 MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDL 154
MWG+ D G +L S +TP+ H++ VACG H + L E
Sbjct: 53 MWGS---GDYGRLGLGNLDSQWTPAGCSALSDHSIRAVACGGAHTLFLT--------ETR 101
Query: 155 VCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
++ G N+ GQLG+ D +S + P + ++D + ++ G +H+A +T
Sbjct: 102 RVFATGLNDCGQLGVSDVKSHAMDPLEVSGLDKD----ILHISAGYYHSAAIT------- 150
Query: 214 MLESMCWTFGLGENGQLGHGTTQSAL--VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
++ + +G +GQLG G + + VP +V+ L + + SV G H+ V+ G+
Sbjct: 151 -VDGELYMWGKNSSGQLGLGKKAARVVRVPTKVEAL-HGITIQSVALGSEHSVAVTDGGE 208
Query: 272 V 272
V
Sbjct: 209 V 209
>gi|188035869|ref|NP_082981.3| hect domain and RLD 3 [Mus musculus]
gi|148666330|gb|EDK98746.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666331|gb|EDK98747.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148666332|gb|EDK98748.1| hect domain and RLD 3, isoform CRA_b [Mus musculus]
gi|148877724|gb|AAI45981.1| Hect domain and RLD 3 [Mus musculus]
gi|148877951|gb|AAI45979.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 88.2 bits (217), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSVNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ + ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY--------TCGVNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISG 305
L Q L V CG +H +++ G ++WG +N G + S
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWG--------------KNSHGQLGLGKEFPSQ 178
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P + + + QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSVNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT L P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLALV----PSS---GLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
>gi|148700104|gb|EDL32051.1| hect domain and RLD 4, isoform CRA_a [Mus musculus]
Length = 546
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAI--- 211
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 212 -----FGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 130/298 (43%), Gaps = 50/298 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHT 128
I +V G +LA+++ G ++ WG ++G L S P +
Sbjct: 85 NIVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQ 138
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQD 187
+V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 139 IVQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LG 189
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 190 IPF--MQVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 239
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 -RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV---- 288
Query: 308 PHGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 -----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLI--KSLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 42.4 bits (98), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|296189284|ref|XP_002742715.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 2
[Callithrix jacchus]
Length = 577
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 111 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 162
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 163 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 212
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + P +V Q +V++ CG V +G+V+ WG N L
Sbjct: 213 GSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNG------NGQLGLG 266
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 267 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 320
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 321 SNQSYPTPV 329
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 180 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPTPRRVTGCLQNK 231
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 232 --VVVTIACGQMCCMAVV------DSGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 280
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 281 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 321
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 322 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 380
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 381 DVFACFATPAVTWRLLSVE 399
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ ++G +++WG + G L +S TP V G V
Sbjct: 233 VVTIACGQMCCMAVVDSGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 286
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 287 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 337
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 338 EI--AACHSTHTS 348
>gi|296220559|ref|XP_002756357.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Callithrix jacchus]
Length = 979
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A +V+
Sbjct: 104 QVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFC 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L + + I +L G F +QVA G AH+ ++T G
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL-------GIPF---MQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D + P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.1 bits (100), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|403347403|gb|EJY73122.1| RCC1 and BTB domaincontaining protein putative [Oxytricha
trifallax]
Length = 685
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 105/219 (47%), Gaps = 21/219 (9%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D Y+ G NN GQLG G + + P +++ V V+C +H+ ++T R
Sbjct: 143 QDGKLYTCGYNNYGQLGHGTQSNLSTPTLVQAL---KDTQVTNVSCSYYHSLIVTQDMRQ 199
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
++ ++ G +NGQLG T + P+ ++ L ++ CGL H+ V+ G+
Sbjct: 200 ASNQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLNTR-QVIQTACGLHHSVFVTVHGE 258
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+S G L N + +RN+ P+LI K + VQ ACG HT++ D
Sbjct: 259 VFSCGFNDNGQLGHNDTKSRNQ------PVLIE-----SLKNKFIVQAACGYYHTLVRRD 307
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
G +++++GR G LG I+ A++ P +EF
Sbjct: 308 TG-EIYAFGRNDKGQLG----IETNGQALI-QPKQIQEF 340
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 95/378 (25%), Positives = 148/378 (39%), Gaps = 78/378 (20%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVK-AGGMMSLAI-DNAGA 92
+GF+GS L G S+ K I+I + A G +LAI G
Sbjct: 96 VGFNGSGQLGH---------GNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGK 146
Query: 93 LWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
L+ G N T+ S TP+ V V V+C H + +
Sbjct: 147 LYTCGYNNYGQLGHGTQSNLS-----TPTLVQALKDTQVTNVSCSYYHSLIVTQDMRQAS 201
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ YS G N+NGQLG + PKII + N V + CG H+ +T
Sbjct: 202 NQQTTVYSVGRNDNGQLGQEHTCHEITPKIIRSLN---TRQVIQTACGLHHSVFVT---- 254
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ ++ G +NGQLGH T+S P ++ L ++V CG +HT V G
Sbjct: 255 ----VHGEVFSCGFNDNGQLGHNDTKSRNQPVLIESLKNK-FIVQAACGYYHTLVRRDTG 309
Query: 271 DVWSWGM-EKG-LGLCPN--------------------------------------ASLT 290
+++++G +KG LG+ N +S +
Sbjct: 310 EIYAFGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQS 369
Query: 291 RNEAGDAISPILISGN-GPHGPKFQ------DPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
E+G + + S N P+ Q + ++ACG H++ + + G +L+++GRG
Sbjct: 370 LGESGAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCESG-QLFTFGRGN 428
Query: 344 SGVLGTGKTIDFFAPAIV 361
G LG G T D P V
Sbjct: 429 HGQLGQGNTEDQKLPKQV 446
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 100/217 (46%), Gaps = 34/217 (15%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ + +G N+ G+LGLGD + R P + F++ V ++ G+ H A+LT R D+
Sbjct: 40 LVFVFGQNSYGELGLGDVQERSIPSQVRFFDE---MNVTQIAAGNEHIAVLT---RNGDV 93
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVW 273
L T G +GQLGHG +S P++++ L + +S G + +++S G ++
Sbjct: 94 L-----TVGFNGSGQLGHGNNKSISTPKKIESLKNIRITHISSANGCENLAIISQDGKLY 148
Query: 274 SWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+ G LG ++L+ +P L+ K V+C H+++VT
Sbjct: 149 TCGYNNYGQLGHGTQSNLS--------TPTLV-----QALKDTQVTNVSCSYYHSLIVTQ 195
Query: 332 DGYK-------LWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + ++S GR +G LG T P I+
Sbjct: 196 DMRQASNQQTTVYSVGRNDNGQLGQEHTCHEITPKII 232
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/223 (21%), Positives = 77/223 (34%), Gaps = 72/223 (32%)
Query: 99 CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYS 158
C D+ G S P + +V+ ACG H + GE Y +
Sbjct: 262 CGFNDNGQLGHNDTKSRNQPVLIESLKNKFIVQAACGYYHTLVRRDTGEIY--------A 313
Query: 159 WGANNNGQLGL-GDRESRLRPKIIETF--------------------------------- 184
+G N+ GQLG+ + ++ ++PK I+ F
Sbjct: 314 FGRNDKGQLGIETNGQALIQPKQIQEFLTVSNIQHSGGNQNQLHSGQEHNQPSSQSLGES 373
Query: 185 -------------NQDSPWAVY--------EVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
N P Y ++ CG +H+ L +TFG
Sbjct: 374 GAIMQGLAESNNLNNQQPQVQYLSKKVNISKIACGCYHSIALCE--------SGQLFTFG 425
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
G +GQLG G T+ +P+QV L ++ + G +HT V+
Sbjct: 426 RGNHGQLGQGNTEDQKLPKQVASLHDK-KVIGIAGGFYHTIVL 467
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%), Gaps = 11/83 (13%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ K+ACG H +AL +G+ +++G N+GQLG G+ E + PK + + +
Sbjct: 401 NISKIACGCYHSIALCESGQ--------LFTFGRGNHGQLGQGNTEDQKLPKQVASLHDK 452
Query: 188 SPWAVYEVTCGSFHTALLTHRKR 210
V + G +HT +L +K+
Sbjct: 453 K---VIGIAGGFYHTIVLVKQKK 472
>gi|27503689|gb|AAH42574.1| Hect domain and RLD 3 [Mus musculus]
Length = 1050
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSVNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ + ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLALVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 42/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY--------TCGVNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISG 305
L Q L V CG +H +++ G ++WG +N G + S
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWG--------------KNSHGQLGLGKEFPSQ 178
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P + + + QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSVNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT L P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLALV----PSS---GLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
>gi|55725019|emb|CAH89377.1| hypothetical protein [Pongo abelii]
Length = 451
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 90 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 141
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 142 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 191
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 192 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 245
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 246 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 299
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 300 SNQSYPTPV 308
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 159 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 210
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 211 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 259
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 260 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 300
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVLG-------TG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 301 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 359
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 DVFACFATPAVTWRLLSVE 378
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 212 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 265
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 266 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 316
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 317 EI--AACHSTHTS 327
>gi|344284757|ref|XP_003414131.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Loxodonta
africana]
Length = 1050
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +VT G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVTAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKNGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 116/278 (41%), Gaps = 66/278 (23%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPL 192
Query: 301 ILISGNGPH-------GPKF-----------------------------QDPVQVACGAA 324
++ G H G F Q V ++CG
Sbjct: 193 AQVTAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
HT ++T +G ++++G G G LG D P VL
Sbjct: 253 HTAVLTKNG-GVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVTAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKNGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|301117544|ref|XP_002906500.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
gi|262107849|gb|EEY65901.1| regulator of chromosome condensation (RCC1)-like protein
[Phytophthora infestans T30-4]
Length = 4048
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 117/242 (48%), Gaps = 45/242 (18%)
Query: 119 SPVWDFHGHTV--VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
+PV G + V A G EH++A+ S G +SWG N+ GQLGLG S+
Sbjct: 542 TPVRALSGIAISMVAAANGCEHMLAVASDG--------AVFSWGYNDRGQLGLGSTISKS 593
Query: 177 R-PKIIETFNQDSPWAVYEVTCGSF---HTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
P++I++ + Y +T + H+A+++ ++L TFG+ + GQLG
Sbjct: 594 HTPRMIDSLREK-----YHITTAAVSYHHSAVVSSN---GELL-----TFGMNDCGQLGL 640
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNAS 288
TQ P+ V L V + CGL+HT +S G+V+S+G + GLG
Sbjct: 641 DHTQHQHTPQVVDALSSQV-VTKAACGLYHTVAATSDGEVYSFGKNDYGQLGLG------ 693
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
A + +P L+ + G + V V+CG HTV +++ G KL +WGR G LG
Sbjct: 694 ----HARNIKTPALVKTS--LGESDEKIVAVSCGYYHTVTISEKG-KLITWGRNDYGQLG 746
Query: 349 TG 350
G
Sbjct: 747 IG 748
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 74/160 (46%), Gaps = 17/160 (10%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
TP V V K ACG H VA S GE Y S+G N+ GQLGLG +
Sbjct: 648 TPQVVDALSSQVVTKAACGLYHTVAATSDGEVY--------SFGKNDYGQLGLGHARNIK 699
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
P +++T +S + V+CG +HT ++ + + T+G + GQLG G+ +
Sbjct: 700 TPALVKTSLGESDEKIVAVSCGYYHTVTISEKGK--------LITWGRNDYGQLGIGSKE 751
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
Q LP + + CG +H+ ++ S G V +G
Sbjct: 752 HK-NSAQFVPLPMSSKIKNASCGCYHSLILMSNGRVMVFG 790
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/242 (26%), Positives = 107/242 (44%), Gaps = 35/242 (14%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F + VA G+E + +++ G + + G N +GQ G G E R+ II T
Sbjct: 494 FSAKGIRDVAGGNEVLAVVMNDGGVF--------TCGLNKSGQCGNGTFEERV---IIAT 542
Query: 184 -FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVP 241
S A+ V + +L + +++G + GQLG G+T S + P
Sbjct: 543 PVRALSGIAISMVAAANGCEHMLAVAS------DGAVFSWGYNDRGQLGLGSTISKSHTP 596
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAIS 299
+ L + ++ + H++VVSS G++ ++GM LGL + DA+S
Sbjct: 597 RMIDSLREKYHITTAAVSYHHSAVVSSNGELLTFGMNDCGQLGLDHTQHQHTPQVVDALS 656
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
+++ + ACG HTV T DG +++S+G+ G LG G + PA
Sbjct: 657 SQVVT-------------KAACGLYHTVAATSDG-EVYSFGKNDYGQLGLGHARNIKTPA 702
Query: 360 IV 361
+V
Sbjct: 703 LV 704
>gi|431911480|gb|ELK13686.1| Putative E3 ubiquitin-protein ligase HERC5 [Pteropus alecto]
Length = 923
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 68/204 (33%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G SLA+ G L+ WG F S+ P V G + +++
Sbjct: 38 IIQITCGDYHSLALSKGGELFAWGQNLHGQLGVGKIFD--STTAPQIVEHLSGVPLAQIS 95
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +G YSWG N+ GQLGLG + + P +IE V
Sbjct: 96 AGKSHSMALSVSGN--------IYSWGRNDFGQLGLGHTDDKDFPSLIEALENQK---VE 144
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ CG HTALLT + + +TFG G+ GQLGH +TQ+ L P V +L +
Sbjct: 145 FLACGGSHTALLTK--------DGLVFTFGAGKYGQLGHNSTQNELRPCLVTKLAGN-RV 195
Query: 254 VSVDCGLFHT-SVVSSAGDVWSWG 276
V CG HT + VS G V+S+G
Sbjct: 196 TQVACGRQHTLAYVSDLGKVFSFG 219
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 115/249 (46%), Gaps = 41/249 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQ 186
++++ CG H +AL GE ++WG N +GQLG+G +S P+I+E
Sbjct: 37 NIIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGKIFDSTTAPQIVEHL-- 86
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S + +++ G H+ L+ + +++G + GQLG G T P ++
Sbjct: 87 -SGVPLAQISAGKSHSMALS--------VSGNIYSWGRNDFGQLGLGHTDDKDFPSLIEA 137
Query: 247 LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS- 304
L Q V ++ CG HT++++ G V+++G K L N + + P L++
Sbjct: 138 LENQKVEFLA--CGGSHTALLTKDGLVFTFGAGK------YGQLGHNSTQNELRPCLVTK 189
Query: 305 --GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
GN QVACG HT+ D K++S+G G G LG G T + P + +
Sbjct: 190 LAGN--------RVTQVACGRQHTLAYVSDLGKVFSFGSGEEGQLGNGGTHNQLIP-LPM 240
Query: 363 WPPLTEEFK 371
P EE K
Sbjct: 241 KLPSNEELK 249
>gi|320163137|gb|EFW40036.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 2579
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 113/256 (44%), Gaps = 39/256 (15%)
Query: 40 SNSLVPCVIEQFLTIGAP---------DSLEDDSKTNHKA---PIKICSVKAGGMMSLAI 87
+NS+ P + T+G DSL ++ A PI V A G +
Sbjct: 1428 TNSVFPMLATTLETMGVSVAAHFAFHIDSLSSRLQSRAPALLPPITSPYVIACGSTHASF 1487
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH--GHTVVKVACGSEHVVALVSA 145
G ++ WG+ V S P+ H + + ++CG+EH VA+ +
Sbjct: 1488 VYDGDVYTWGSSHNGQLGHGDMIDGVGSLPPARCETLHMNSNRIASISCGAEHTVAITNE 1547
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE-----VTCGSF 200
G + Y+WGAN GQLGLGD + R +P ++ P ++E V CG F
Sbjct: 1548 G--------MVYAWGANGYGQLGLGDTDKRTKPTMLSRLE---PVVMHESRIIQVACGYF 1596
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
HT LT + W G G GQLG G+T +AL+P VK L +V + G
Sbjct: 1597 HTLFLTDKGE--------VWACGWGAQGQLGVGSTSNALLPVHVKILDNK-GIVGLAAGF 1647
Query: 261 FHTSVVSSAGDVWSWG 276
H+ V++ +G ++++G
Sbjct: 1648 CHSVVLTESGTLYAFG 1663
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 81/175 (46%), Gaps = 24/175 (13%)
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT---QSALVPEQVKELPQ 249
Y + CGS H + + + +T+G NGQLGHG +L P + + L
Sbjct: 1476 YVIACGSTHASFV---------YDGDVYTWGSSHNGQLGHGDMIDGVGSLPPARCETLHM 1526
Query: 250 YV-YLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ S+ CG HT +++ G V++WG LGL T+ + P+++
Sbjct: 1527 NSNRIASISCGAEHTVAITNEGMVYAWGANGYGQLGLGDTDKRTKPTMLSRLEPVVM--- 1583
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H + +QVACG HT+ +TD G ++W+ G G G LG G T + P V
Sbjct: 1584 --HESRI---IQVACGYFHTLFLTDKG-EVWACGWGAQGQLGVGSTSNALLPVHV 1632
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 20/131 (15%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
F+ VS P+ + H VV+V CG H++ L S G Y C GAN +GQLG
Sbjct: 1826 AFATVSGGIPAALAAADEH-VVQVVCGDWHMLMLTSRGSVY------CL--GANEHGQLG 1876
Query: 169 LGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
+ R PK I F+ P + + G +A + W +G +N
Sbjct: 1877 INSLRPRQEIPKRIGAFDHVPP--IIALAAGEDFSACVD--------AAGQTWIWGRADN 1926
Query: 228 GQLGHGTTQSA 238
GQLG +T +A
Sbjct: 1927 GQLGQESTPNA 1937
Score = 38.5 bits (88), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 13/102 (12%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQY 250
V +V CG +H +LT R + G E+GQLG + + +P+++
Sbjct: 1845 VVQVVCGDWHMLMLTSRGS--------VYCLGANEHGQLGINSLRPRQEIPKRIGAFDHV 1896
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNAS 288
++++ G ++ V +AG W WG + G PNAS
Sbjct: 1897 PPIIALAAGEDFSACVDAAGQTWIWGRADNGQLGQESTPNAS 1938
>gi|390472682|ref|XP_003734522.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Callithrix
jacchus]
Length = 1049
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A +V+
Sbjct: 104 QVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFC 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L + + I +L G F +QVA G AH+ ++T G
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL-------GIPF---MQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D + P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|310825568|ref|YP_003957926.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|309398640|gb|ADO76099.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 482
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + S + P+++ +V G M SLA+ G +W WG D G + V
Sbjct: 205 LGNGSTAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWG---FNDYGQLGNGTTV 261
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S TP PV VV VA G H +AL + D ++WG N GQLG
Sbjct: 262 HSPTPVPVPGL--SQVVSVAAGGFHSLALCA--------DGTVWAWGNNGFGQLGEAVST 311
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R +P +E + V V G +H+ + R L W++G +GQLG+G
Sbjct: 312 QRTKPGRVEGLRE-----VVAVAGGFYHSLAV----RAGGSL----WSWGNNYSGQLGNG 358
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ S+ P V+ L + SV G H+ V + G VW+WG + L
Sbjct: 359 SFSSSARPAPVQGLGA---VTSVAAGGMHSVAVQADGTVWAWGRNE------EGQLGHER 409
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
A + +P+ + P Q V VA G H++ V G LW+WG G LG
Sbjct: 410 APERATPVRV-------PGLQGEVAVAAGFYHSLSVQAGG-SLWAWGLNDFGQLG 456
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 114/288 (39%), Gaps = 43/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V G SLA+ G +W C + G + + P PV V VA
Sbjct: 125 VRAVAGGYQYSLALHADGTVWA---CGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVA 179
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL + D ++WG N GQLG G R P + V
Sbjct: 180 AGGSHALALCA--------DGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQ-----GVV 226
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V G H+ L + W +G + GQLG+GTT + P V L Q +
Sbjct: 227 AVAGGYMHSLALC--------ADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ---V 275
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
VSV G FH+ + + G VW+WG G G A T+ P + G
Sbjct: 276 VSVAAGGFHSLALCADGTVWAWG-NNGFGQLGEAVSTQR-----TKPGRVEG-------L 322
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V VA G H++ V G LWSWG SG LG G PA V
Sbjct: 323 REVVAVAGGFYHSLAVRAGG-SLWSWGNNYSGQLGNGSFSSSARPAPV 369
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
+ SL C DG + G+N F +G S + + ++ +V G
Sbjct: 283 FHSLALCADGTVWAWGNNG--------FGQLGEAVSTQRTKPGRVEGLREVVAVAGGFYH 334
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
SLA+ G+LW WGN S G S SS P+PV V VA G H VA+
Sbjct: 335 SLAVRAGGSLWSWGNN---YSGQLGNGSFSSSARPAPVQGLG--AVTSVAAGGMHSVAVQ 389
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ D ++WG N GQLG R P + + V G +H+
Sbjct: 390 A--------DGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGE-----VAVAAGFYHSL 436
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+ W +GL + GQLG +++ L+P
Sbjct: 437 SV--------QAGGSLWAWGLNDFGQLGD--SEAPLMP 464
>gi|426255642|ref|XP_004021457.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Ovis aries]
Length = 979
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G +++A G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|12325184|gb|AAG52535.1|AC013289_2 putative regulator of chromosome condensation; 48393-44372
[Arabidopsis thaliana]
Length = 1028
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 138/319 (43%), Gaps = 55/319 (17%)
Query: 65 KTNHKAPIKICSVKAGGMMSLA--------IDNAGALWMWG----NCPLPDSSTEGGFSL 112
+T+ + P I SV+ G SLA I +G L+ WG N L E
Sbjct: 324 ETDAQKPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNES---- 379
Query: 113 VSSFTPSPVW-DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
S + P V D G V VACG H + S+G+ +++G G LG GD
Sbjct: 380 -SCWIPKRVTGDLQGLYVSDVACGPWHTAVVASSGQ--------LFTFGDGTFGALGHGD 430
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH-----RKRPNDMLESMCWTFGLGE 226
R S P+ +E+ V +V CG +HTA + + D +T+G GE
Sbjct: 431 RRSTSVPREVESL---IGLIVTKVACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGE 487
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
GQLGHG + L+PE V L + V CG T +S G V++ G
Sbjct: 488 KGQLGHGDNDTKLLPECVISLTNE-NICQVACGHSLTVSRTSRGHVYTMG---------- 536
Query: 287 ASLTRNEAGDAISPILISGNGP---HGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRG 342
S + G+ + GN P G + V ++ACG+ H ++T ++++WG+G
Sbjct: 537 -STAYGQLGNPTA----KGNFPERVEGDIVEASVEEIACGSYHVAVLTSKS-EIYTWGKG 590
Query: 343 RSGVLGTGKTIDFFAPAIV 361
+G LG G + PA+V
Sbjct: 591 LNGQLGHGNVENKREPAVV 609
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 125/295 (42%), Gaps = 50/295 (16%)
Query: 87 IDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVV----KVACGSEHVVA 141
D G +++WG + D G G SL S+ + + T+V +ACG H V
Sbjct: 243 FDALGDVFVWGES-ISDGVLSGTGNSLNSTTEDALLPKALESTIVLDAQNIACGKCHAVL 301
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ GE + SWG G+LG G +PK I + + CG FH
Sbjct: 302 VTKQGEIF--------SWGEGKGGKLGHGLETDAQKPKFISSVRG---LGFKSLACGDFH 350
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T + D+ W G LGHG S +P++V Q +Y+ V CG +
Sbjct: 351 TCAIT---QSGDLYS---WGDGTHNVDLLGHGNESSCWIPKRVTGDLQGLYVSDVACGPW 404
Query: 262 HTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
HT+VV+S+G ++++ G LG S + +++ ++++ +V
Sbjct: 405 HTAVVASSGQLFTFGDGTFGALGHGDRRSTSVPREVESLIGLIVT-------------KV 451
Query: 320 ACGAAHT---VLVTDDGY---------KLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
ACG HT V VT++ ++++WG G G LG G P V+
Sbjct: 452 ACGVWHTAAVVEVTNEASEAEVDSSRGQVFTWGDGEKGQLGHGDNDTKLLPECVI 506
>gi|149043901|gb|EDL97352.1| rCG61079, isoform CRA_a [Rattus norvegicus]
Length = 546
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/298 (27%), Positives = 130/298 (43%), Gaps = 50/298 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHT 128
I +V G +LA+++ G ++ WG ++G L S P +
Sbjct: 85 NIVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQ 138
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQD 187
+V+VACG H +AL A E + WG N GQLGLG + + + P++I++
Sbjct: 139 IVQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIECQKQTSPQLIKSL-LG 189
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 190 IPF--MQVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 239
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 -RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV---- 288
Query: 308 PHGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 -----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---ECQKQTSPQLI--KSLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 42.0 bits (97), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|125972780|ref|YP_001036690.1| dockerin type I cellulosome protein [Clostridium thermocellum ATCC
27405]
gi|256004969|ref|ZP_05429941.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281416977|ref|ZP_06247997.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|385779304|ref|YP_005688469.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|419721626|ref|ZP_14248784.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
gi|419725441|ref|ZP_14252484.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|125713005|gb|ABN51497.1| Dockerin type 1 [Clostridium thermocellum ATCC 27405]
gi|255991038|gb|EEU01148.1| cellulosome protein dockerin type I [Clostridium thermocellum DSM
2360]
gi|281408379|gb|EFB38637.1| Dockerin type 1 [Clostridium thermocellum JW20]
gi|316940984|gb|ADU75018.1| Dockerin type 1 [Clostridium thermocellum DSM 1313]
gi|380771190|gb|EIC05067.1| Dockerin type 1 protein [Clostridium thermocellum YS]
gi|380782322|gb|EIC11962.1| Dockerin type 1 protein [Clostridium thermocellum AD2]
Length = 469
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 85/315 (26%), Positives = 135/315 (42%), Gaps = 55/315 (17%)
Query: 60 LEDDSKTNHK---APIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF 110
+E D T + PIK+ + V A +L + N G +W++ P+ SS
Sbjct: 195 MERDPDTKERFTSIPIKVETHSDIKYVAAKFSRTLIVKNDGTVWLYSLPPINTSSD---- 250
Query: 111 SLVSSFTPSPVWDFHGHTVVKVA-CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ + P W+ G +K+A G+ H+VAL ED ++WG N GQLG
Sbjct: 251 ---AEYMP---WEIKGFGDIKMADIGTGHIVALR--------EDGTVWTWGENVWGQLGN 296
Query: 170 G-DRESRLRPKIIETFNQDSPWA-VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G + + I NQ + + + G H+ L + WT+G N
Sbjct: 297 GWQQHHNIHTYIYFEPNQAKNLSDIVSIAAGDAHSVALKS--------DGTVWTWGSNFN 348
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
G+LG+GTT L P++V+ L +V++D G+ HT + + G VW WG + G N
Sbjct: 349 GELGNGTTTYILEPKKVEGLED---IVAIDAGIGHTVALKADGTVWVWG-KNSYGQLGNG 404
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
+ R+ PI + G + V + G T+ +DG +W+WG+ G L
Sbjct: 405 TTMRSTV-----PIQVEG-------LEGIVAIQAGMECTIAYKNDG-TVWAWGKNDFGQL 451
Query: 348 GTGKTIDFFAPAIVL 362
G G + P V
Sbjct: 452 GDGTFENILRPVKVF 466
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 68/176 (38%), Gaps = 32/176 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I S+ AG S+A+ + G +W WG N L + +T P V +V
Sbjct: 321 IVSIAAGDAHSVALKSDGTVWTWGSNFNGELGNGTT------TYILEPKKVEGL--EDIV 372
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+ G H VAL + G + WG N+ GQLG G P +E
Sbjct: 373 AIDAGIGHTVALKADG--------TVWVWGKNSYGQLGNGTTMRSTVPIQVEGLE----- 419
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ + G T + + W +G + GQLG GT ++ L P +V E
Sbjct: 420 GIVAIQAGMECTIAYKN--------DGTVWAWGKNDFGQLGDGTFENILRPVKVFE 467
>gi|115374127|ref|ZP_01461415.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368903|gb|EAU67850.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 479
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + S + P+++ +V G M SLA+ G +W WG D G + V
Sbjct: 202 LGNGSTAHRATPVQVPGLQGVVAVAGGYMHSLALCADGTVWAWG---FNDYGQLGNGTTV 258
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S TP PV VV VA G H +AL + D ++WG N GQLG
Sbjct: 259 HSPTPVPVPGL--SQVVSVAAGGFHSLALCA--------DGTVWAWGNNGFGQLGEAVST 308
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R +P +E + V V G +H+ + R L W++G +GQLG+G
Sbjct: 309 QRTKPGRVEGLRE-----VVAVAGGFYHSLAV----RAGGSL----WSWGNNYSGQLGNG 355
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ S+ P V+ L + SV G H+ V + G VW+WG + L
Sbjct: 356 SFSSSARPAPVQGLGA---VTSVAAGGMHSVAVQADGTVWAWGRNE------EGQLGHER 406
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
A + +P+ + P Q V VA G H++ V G LW+WG G LG
Sbjct: 407 APERATPVRV-------PGLQGEVAVAAGFYHSLSVQAGG-SLWAWGLNDFGQLG 453
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 85/288 (29%), Positives = 114/288 (39%), Gaps = 43/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V G SLA+ G +W C + G + + P PV V VA
Sbjct: 122 VRAVAGGYQYSLALHADGTVWA---CGSNSAGQLGNGTTAARSAPRPVPGLS--RAVAVA 176
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL + D ++WG N GQLG G R P + V
Sbjct: 177 AGGSHALALCA--------DGTVWAWGNNGYGQLGNGSTAHRATPVQVPGLQ-----GVV 223
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V G H+ L + W +G + GQLG+GTT + P V L Q +
Sbjct: 224 AVAGGYMHSLALC--------ADGTVWAWGFNDYGQLGNGTTVHSPTPVPVPGLSQ---V 272
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
VSV G FH+ + + G VW+WG G G A T+ P + G
Sbjct: 273 VSVAAGGFHSLALCADGTVWAWG-NNGFGQLGEAVSTQR-----TKPGRVEG-------L 319
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V VA G H++ V G LWSWG SG LG G PA V
Sbjct: 320 REVVAVAGGFYHSLAVRAGG-SLWSWGNNYSGQLGNGSFSSSARPAPV 366
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 85/218 (38%), Gaps = 36/218 (16%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
+ SL C DG + G+N F +G S + + ++ +V G
Sbjct: 280 FHSLALCADGTVWAWGNNG--------FGQLGEAVSTQRTKPGRVEGLREVVAVAGGFYH 331
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
SLA+ G+LW WGN S G S SS P+PV V VA G H VA+
Sbjct: 332 SLAVRAGGSLWSWGNN---YSGQLGNGSFSSSARPAPVQGLG--AVTSVAAGGMHSVAVQ 386
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ D ++WG N GQLG R P + + V G +H+
Sbjct: 387 A--------DGTVWAWGRNEEGQLGHERAPERATPVRVPGLQGE-----VAVAAGFYHSL 433
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+ W +GL + GQLG +++ L+P
Sbjct: 434 SV--------QAGGSLWAWGLNDFGQLGD--SEAPLMP 461
>gi|440895825|gb|ELR47919.1| Putative E3 ubiquitin-protein ligase HERC4 [Bos grunniens mutus]
Length = 1056
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G +++A G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|296220557|ref|XP_002756356.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Callithrix jacchus]
Length = 1057
Score = 88.2 bits (217), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/267 (28%), Positives = 113/267 (42%), Gaps = 35/267 (13%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ G
Sbjct: 4 WGNASFGQLGL-GGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A +V+
Sbjct: 104 QVYAW--GLDSDGQLGLLGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFC 160
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L + + I +L G F +QVA G AH+ ++T G
Sbjct: 161 WGQNKYGQLGLGTDCKKQTSPQLIKSLL-------GIPF---MQVAAGGAHSFVLTLSG- 209
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ WGR + G LG D + P ++
Sbjct: 210 AIFGWGRNKFGQLGLNDENDRYVPNLL 236
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVQDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|296189286|ref|XP_002742716.1| PREDICTED: RCC1 and BTB domain-containing protein 2 isoform 3
[Callithrix jacchus]
Length = 556
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 114/249 (45%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 90 STIEPRRLDSLSGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 141
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 142 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 191
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + P +V Q +V++ CG V +G+V+ WG N L
Sbjct: 192 GSTVNQPTPRRVTGCLQNKVVVTIACGQMCCMAVVDSGEVYVWGYNG------NGQLGLG 245
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 246 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 299
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 300 SNQSYPTPV 308
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 159 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPTPRRVTGCLQNK 210
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 211 --VVVTIACGQMCCMAVV------DSGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 259
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 260 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 300
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 301 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 359
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 DVFACFATPAVTWRLLSVE 378
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ ++G +++WG + G L +S TP V G V
Sbjct: 212 VVTIACGQMCCMAVVDSGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 265
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 266 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 316
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 317 EI--AACHSTHTS 327
>gi|164448576|ref|NP_001070362.2| probable E3 ubiquitin-protein ligase HERC4 [Bos taurus]
gi|296472143|tpg|DAA14258.1| TPA: hect domain and RLD 4 [Bos taurus]
Length = 1057
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G +++A G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|426255640|ref|XP_004021456.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Ovis aries]
Length = 1049
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G +++A G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|426255638|ref|XP_004021455.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Ovis aries]
Length = 1057
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G +++A G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|307178981|gb|EFN67497.1| Probable E3 ubiquitin-protein ligase HERC4 [Camponotus floridanus]
Length = 1048
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/297 (26%), Positives = 128/297 (43%), Gaps = 50/297 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
+ G +LA++ G L+ WG + +G L S TP V +V++
Sbjct: 89 IACGSCHTLAVNEWGQLFSWG------CNMKGQLGLNSVDCTERTPRMVKALGTSVIVQI 142
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWA 191
ACG EH +AL + GE YSWG+N GQLG+G + ++PK I T +
Sbjct: 143 ACGIEHSIALTNDGE--------LYSWGSNREGQLGIGSHTVTEIKPKRIITL---AAVP 191
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ + CG +HT +++ + + +G GQLG TQ +VP Q++ L +
Sbjct: 192 IAFIACGGYHTVVISK--------SGVVFAWGRNTFGQLGLNDTQQRIVPCQLRTL-RNA 242
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ CG + ++ G V++ G + G G N L R S +
Sbjct: 243 KVCYAACGEEFSVFLTLDGGVFTCGAGMYGQLGHGNGMNEILPRQVMELMGSTV------ 296
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG HT+ + ++++WG G +G LG + P +VL P
Sbjct: 297 ---------TQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASRSATTPLVVLGP 344
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 112/254 (44%), Gaps = 38/254 (14%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
GG + F P V + V ++ACG + V + + G+ YS G N+ GQ
Sbjct: 15 GGIEDENIFMPRQVDFAKANEVEQIACGENYTVTITNDGQV--------YSCGNNDYGQ- 65
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
LG ++R R ++I + + ++ CGS HT + N+ + W G
Sbjct: 66 -LGHEKARKRLQLIPGLD---AFVFKKIACGSCHTLAV------NEWGQLFSW--GCNMK 113
Query: 228 GQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLC 284
GQLG + + P VK L V +V + CG+ H+ +++ G+++SWG E LG+
Sbjct: 114 GQLGLNSVDCTERTPRMVKALGTSV-IVQIACGIEHSIALTNDGELYSWGSNREGQLGI- 171
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
S T E I P I F +ACG HTV+++ G +++WGR
Sbjct: 172 --GSHTVTE----IKPKRIITLAAVPIAF-----IACGGYHTVVISKSGV-VFAWGRNTF 219
Query: 345 GVLGTGKTIDFFAP 358
G LG T P
Sbjct: 220 GQLGLNDTQQRIVP 233
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 96/198 (48%), Gaps = 31/198 (15%)
Query: 157 YSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ WG+ +G+LGLG + E+ P+ ++ + V ++ CG +T +T+
Sbjct: 2 FCWGSTIHGELGLGGIEDENIFMPRQVDFAKANE---VEQIACGENYTVTITN------- 51
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ ++ G + GQLGH + L + + L +V+ + CG HT V+ G ++S
Sbjct: 52 -DGQVYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVF-KKIACGSCHTLAVNEWGQLFS 107
Query: 275 WG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG M+ LGL R +P ++ G VQ+ACG H++ +T+D
Sbjct: 108 WGCNMKGQLGLNSVDCTER-------TPRMVKALGT-----SVIVQIACGIEHSIALTND 155
Query: 333 GYKLWSWGRGRSGVLGTG 350
G +L+SWG R G LG G
Sbjct: 156 G-ELYSWGSNREGQLGIG 172
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 89/214 (41%), Gaps = 45/214 (21%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
+GQLG GS+++ ++ +T+ A + I + GG ++ I +G
Sbjct: 166 EGQLGI-GSHTVTEIKPKRIITLAA---------------VPIAFIACGGYHTVVISKSG 209
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
++ WG +T G L + P + V ACG E V L T
Sbjct: 210 VVFAWGR------NTFGQLGLNDTQQRIVPCQLRTLRNAKVCYAACGEEFSVFL-----T 258
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT-ALLTH 207
G C GA GQLG G+ + + P+ + + V +++CG HT AL+
Sbjct: 259 LDGGVFTC---GAGMYGQLGHGNGMNEILPRQVMELMGST---VTQISCGKRHTLALVPS 312
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
R R + +GLG GQLG+ ++SA P
Sbjct: 313 RGR--------VYAWGLGGAGQLGNRASRSATTP 338
>gi|327273047|ref|XP_003221294.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like [Anolis
carolinensis]
Length = 1081
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 115/252 (45%), Gaps = 33/252 (13%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
S+ P + VV V+CG EH +A+ + G Y SWGA GQLG G+
Sbjct: 81 SYGPELIQALETQKVVHVSCGKEHSLAVCNKGRVY--------SWGAGTFGQLGTGELGD 132
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
RL PK T N S + V +V CG H+ LT+ R +++G +GQLG G
Sbjct: 133 RLIPK---TINALSKYKVIQVACGHDHSIALTNDGR--------IFSWGQNIHGQLGLGK 181
Query: 235 -TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
S P+QV L + L V G H+ +S +G V+ WG L L++ +
Sbjct: 182 DISSQASPQQVSAL-DGIPLAQVAAGGAHSFALSLSGVVYGWGRNNAHQL----GLSQAK 236
Query: 294 AGDAI-SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ I P I+ + D V+CGA HT ++T +G ++++G +G LG +
Sbjct: 237 PKEQIFKPYSIAAL-----RSLDVAFVSCGAEHTAVLTQNG-SVYTFGDDSAGQLGRNSS 290
Query: 353 ID-FFAPAIVLW 363
F P V W
Sbjct: 291 SSPKFGPQKVEW 302
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 122/278 (43%), Gaps = 46/278 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G SLA+ N G ++ WG G L P + + V++V
Sbjct: 94 KVVHVSCGKEHSLAVCNKGRVYSWGAGTF---GQLGTGELGDRLIPKTINALSKYKVIQV 150
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWA 191
ACG +H +AL + G +SWG N +GQLGLG D S+ P+ + + P A
Sbjct: 151 ACGHDHSIALTNDGRI--------FSWGQNIHGQLGLGKDISSQASPQQVSALD-GIPLA 201
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+V G H+ L+ L + + +G QLG + EQ+ +
Sbjct: 202 --QVAAGGAHSFALS--------LSGVVYGWGRNNAHQLGLSQAKPK---EQIFKPYSIA 248
Query: 252 YLVSVD-----CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L S+D CG HT+V++ G V+++G + L RN + SP
Sbjct: 249 ALRSLDVAFVSCGAEHTAVLTQNGSVYTFGDDSA------GQLGRNSSS---SPKF---- 295
Query: 307 GPHGPKFQD-PVQ-VACGAAHTVLVTDDGYKLWSWGRG 342
GP ++ D PV +ACG+ HT++ +L S+GRG
Sbjct: 296 GPQKVEWIDGPVSLLACGSYHTLVRISTSGQLLSFGRG 333
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 94/208 (45%), Gaps = 34/208 (16%)
Query: 155 VCYSWGANNNGQLGLGDRES-----RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
+ Y WG + GQLGLG E RP +Q AV V CG HT LL
Sbjct: 1 MLYCWGEGSAGQLGLGKGEGVSGPVPFRPGPRAPADQ----AVVLVACGERHTLLLR--- 53
Query: 210 RPNDMLESMCWTFGLGENGQLGH----GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+D + C G GQLG G + + PE ++ L + +V V CG H+
Sbjct: 54 --DDGGVASC---GDNSRGQLGRRLPSGQEKRSYGPELIQAL-ETQKVVHVSCGKEHSLA 107
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
V + G V+SWG L E GD + P I+ + +QVACG H
Sbjct: 108 VCNKGRVYSWGAGT------FGQLGTGELGDRLIPKTINALSKY-----KVIQVACGHDH 156
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
++ +T+DG +++SWG+ G LG GK I
Sbjct: 157 SIALTNDG-RIFSWGQNIHGQLGLGKDI 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 28/171 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGH 127
I + V AGG S A+ +G ++ WG +++ + G S F P +
Sbjct: 198 IPLAQVAAGGAHSFALSLSGVVYGWGR----NNAHQLGLSQAKPKEQIFKPYSIAALRSL 253
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQ 186
V V+CG+EH L G Y++G ++ GQLG S + P+ +E
Sbjct: 254 DVAFVSCGAEHTAVLTQNGSV--------YTFGDDSAGQLGRNSSSSPKFGPQKVEWI-- 303
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
D P ++ + CGS+HT L +L +FG G + GTTQS
Sbjct: 304 DGPVSL--LACGSYHT--LVRISTSGQLL-----SFGRGPLQRNRSGTTQS 345
>gi|281207647|gb|EFA81827.1| putative protein serine/threonine kinase [Polysphondylium pallidum
PN500]
Length = 1626
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 105/213 (49%), Gaps = 27/213 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ ++ AG + ID++GAL+ WG D G + + P+ V +GH VV V
Sbjct: 238 RLVALDAGASRAAVIDSSGALFTWGRG---DHGRLGHGDTENRYQPTLVSSLYGHVVVAV 294
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPWA 191
A G H +AL AGE +SWG NGQLG G +S +L PK ++ F D P
Sbjct: 295 ALGGGHSLALTKAGE--------LFSWGRGENGQLGHGSYQSQQLAPKQLQFF-VDMP-K 344
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL--VPEQVKELPQ 249
+ ++ G +H+ + + + +G+ + G LG G + +P+++ +P+
Sbjct: 345 IIGISAGGYHSVA--------QLDDGSVYAWGMSDYGILGTGDSDDGAINIPQRIL-MPR 395
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
+ ++ CG HT ++S ++SWG GLG
Sbjct: 396 GIRFKTISCGFQHTVALTSDNTIYSWGC--GLG 426
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 37/294 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGA--LWMWGNCPLPDSSTEGGFSLVSSFT--PSPVWDFH 125
A I + V GG ++A+ + L+ WGN G FT P V
Sbjct: 179 ANIPMKYVFCGGRSTIALSHTAGSGLYTWGNNEF---GQLGRGDCGDDFTCLPESVAVPG 235
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
+V + G+ + S+G ++WG ++G+LG GD E+R +P ++ +
Sbjct: 236 AKRLVALDAGASRAAVIDSSG--------ALFTWGRGDHGRLGHGDTENRYQPTLVSSL- 286
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA-LVPEQV 244
V V G H+ LT +++G GENGQLGHG+ QS L P+Q+
Sbjct: 287 --YGHVVVAVALGGGHSLALTKAGE--------LFSWGRGENGQLGHGSYQSQQLAPKQL 336
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ ++ + G +H+ G V++WGM G+ L ++ D I
Sbjct: 337 QFFVDMPKIIGISAGGYHSVAQLDDGSVYAWGMS-DYGI-----LGTGDSDDGAINIPQR 390
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P G +F+ ++CG HTV +T D ++SWG G G LGT + AP
Sbjct: 391 ILMPRGIRFK---TISCGFQHTVALTSDN-TIYSWGCGLGGRLGTFNEKNQCAP 440
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 110/246 (44%), Gaps = 43/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
++ V G+ H+ + +G+ ++WG G+LG GD ES PK + +
Sbjct: 131 IILVNAGAAHIAMISQSGK--------LFTWGEGQYGRLGHGDEESISTPKQVVAL---A 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL--VPEQVKE 246
+ V CG T L+H S +T+G E GQLG G +PE V
Sbjct: 180 NIPMKYVFCGGRSTIALSHTAG------SGLYTWGNNEFGQLGRGDCGDDFTCLPESVA- 232
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+P LV++D G +V+ S+G +++WG +G + L + + P L+S
Sbjct: 233 VPGAKRLVALDAGASRAAVIDSSGALFTWG--RG----DHGRLGHGDTENRYQPTLVSSL 286
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG---------KTIDFFA 357
H V VA G H++ +T G +L+SWGRG +G LG G K + FF
Sbjct: 287 YGHV-----VVAVALGGGHSLALTKAG-ELFSWGRGENGQLGHGSYQSQQLAPKQLQFFV 340
Query: 358 --PAIV 361
P I+
Sbjct: 341 DMPKII 346
>gi|255540989|ref|XP_002511559.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223550674|gb|EEF52161.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1028
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/293 (28%), Positives = 128/293 (43%), Gaps = 38/293 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVKVACG 135
V G + A+ +G L+ WG+ ++ G S VS + P V + V+CG
Sbjct: 355 VACGEFHTCAVTVSGNLYTWGD-DTHNTGYLGHGSAVSHWIPREVIGQIESVRISFVSCG 413
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H A+ S G+ + ++G G LG GDR S +P+ +E+ +V
Sbjct: 414 PWHTAAVSSQGKLF--------TFGDGTFGALGHGDRSSTSKPREVESLKG---LRTLKV 462
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+CG +HTA + R + L +T+G GE GQLGHG + LVP V +P V
Sbjct: 463 SCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCV-SMPAGV 521
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL---CPNASLTRNEAGDAISPILISGNGP 308
V C T ++ G V++ G L C L + GD I I
Sbjct: 522 --CQVACAHSMTIALTVLGQVYTMGAADYGQLGSPCSVGKLPIHTDGD-IRNCHIK---- 574
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ACG+ H V ++ +G +++WG+G +G LG G D P +V
Sbjct: 575 ---------QIACGSHHVVALSSNG-DVYTWGKGINGQLGHGDIKDRHTPTLV 617
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 110/248 (44%), Gaps = 47/248 (18%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS+H V + G+ + SWG ++ G+LG G +PK+I+ ++ +
Sbjct: 303 IACGSKHAVIVTKQGQIF--------SWGESSGGKLGHGADADVSQPKVIDALSESN--- 351
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG--LGENGQLGHGTTQSALVPEQVKELPQ 249
V V CG FHT +T + +T+G G LGHG+ S +P +V +
Sbjct: 352 VVLVACGEFHTCAVT--------VSGNLYTWGDDTHNTGYLGHGSAVSHWIPREVIGQIE 403
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
V + V CG +HT+ VSS G ++++ G LG +S ++ +++
Sbjct: 404 SVRISFVSCGPWHTAAVSSQGKLFTFGDGTFGALGHGDRSSTSKPREVESL--------- 454
Query: 308 PHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDFF 356
K ++V+CG HT V D KL++WG G G LG G
Sbjct: 455 ----KGLRTLKVSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRL 510
Query: 357 APAIVLWP 364
P+ V P
Sbjct: 511 VPSCVSMP 518
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 111/269 (41%), Gaps = 46/269 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++I V G + A+ + G L+ +G+ G S+ P V G +K
Sbjct: 405 VRISFVSCGPWHTAAVSSQGKLFTFGDGTF---GALGHGDRSSTSKPREVESLKGLRTLK 461
Query: 132 VACGSEHVVALVS-AGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V+CG H A++ E+ + + + ++WGA GQLG GD E RL P +
Sbjct: 462 VSCGIWHTAAVIDFINESDRLDTSLSGKLFTWGAGERGQLGHGDEEPRLVPSCVSM---- 517
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P V +V C T LT + +T G + GQLG P V +L
Sbjct: 518 -PAGVCQVACAHSMTIALT--------VLGQVYTMGAADYGQLGS--------PCSVGKL 560
Query: 248 PQYV-------YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P + ++ + CG H +SS GDV++WG KG+ N L + D +P
Sbjct: 561 PIHTDGDIRNCHIKQIACGSHHVVALSSNGDVYTWG--KGI----NGQLGHGDIKDRHTP 614
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLV 329
L+ K + V CG+ T ++
Sbjct: 615 TLVK-----ALKHKQVKSVVCGSNFTAVI 638
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 64/149 (42%), Gaps = 14/149 (9%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P +C V M++A+ G ++ G D G V D +
Sbjct: 518 PAGVCQVACAHSMTIALTVLGQVYTMGAA---DYGQLGSPCSVGKLPIHTDGDIRNCHIK 574
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ACGS HVVAL S G+ Y+WG NGQLG GD + R P +++
Sbjct: 575 QIACGSHHVVALSSNGDV--------YTWGKGINGQLGHGDIKDRHTPTLVKALKHKQ-- 624
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V V CGS TA++ K + +S+C
Sbjct: 625 -VKSVVCGSNFTAVICPHKCVSSADQSIC 652
>gi|115304951|gb|AAI23843.1| Hect domain and RLD 4 [Bos taurus]
Length = 853
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G +++A G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|119629205|gb|EAX08800.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2, isoform CRA_b [Homo sapiens]
Length = 310
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 295 SNQSYPTPV 303
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 52/108 (48%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYP 300
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
F LG N G LG G QS + P ++ L + + +S G H + ++ G+V++WG
Sbjct: 68 FVLGTNCCGCLGLGDVQSTIEPRRLDSLNGKKIACLSYGSGP-HIVLATTEGEVFTWGHN 126
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L + P IS N + + ++VACG+ H++++T DG ++++
Sbjct: 127 A------YSQLGNGTTNHGLVPCHISTNLSN----KQVIEVACGSYHSLVLTSDG-EVFA 175
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG SG +G+G T++ P V
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRV 198
>gi|403273883|ref|XP_003928727.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Saimiri boliviensis boliviensis]
Length = 1049
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|383872260|ref|NP_001244507.1| probable E3 ubiquitin-protein ligase HERC4 [Macaca mulatta]
gi|355782894|gb|EHH64815.1| hypothetical protein EGM_18130 [Macaca fascicularis]
gi|380786489|gb|AFE65120.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
gi|383411599|gb|AFH29013.1| putative E3 ubiquitin-protein ligase HERC4 isoform a [Macaca
mulatta]
Length = 1057
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIIQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 IQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I +QVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------IQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|440792615|gb|ELR13824.1| BTB/POZ domain containing protein [Acanthamoeba castellanii str.
Neff]
Length = 1825
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 101/238 (42%), Gaps = 57/238 (23%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S+ G M S A+ G LW +G PL G ++ P V G VV VA
Sbjct: 115 VASIAVGQMYSAAVTTDGGLWTFGIGPL-------GHAISVKQDPEQVEALRGKKVVAVA 167
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL----------------GLGDRESRLR 177
CGS H+ + +GE Y+WG++ QL G G+R++ +
Sbjct: 168 CGSFHMGCVTESGE--------LYTWGSSVWHQLGGQAAHITIIACYSTAGHGERKNVVE 219
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+ + V EV+CG++HTA+ T R +TFG G G LGHG
Sbjct: 220 PRRVTALEGKR---VVEVSCGAYHTAVRTDAGR--------VYTFGAGSLGALGHGDLVD 268
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+P V L + V CG +HT+VV +G+ PN SL R+E G
Sbjct: 269 QEIPRLVDSLVNRC-VQHVSCGWYHTTVV--------------VGMDPNISLLRDEMG 311
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 31/157 (19%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
WTFG+G LGH + PEQV+ L + +V+V CG FH V+ +G++++WG
Sbjct: 135 WTFGIGP---LGHAISVKQ-DPEQVEAL-RGKKVVAVACGSFHMGCVTESGELYTWG--- 186
Query: 280 GLGLCPNASLTRNEAGDA--ISPILISGNGPHGPKFQ--DP-----------VQVACGAA 324
+S+ G A I+ I HG + +P V+V+CGA
Sbjct: 187 -------SSVWHQLGGQAAHITIIACYSTAGHGERKNVVEPRRVTALEGKRVVEVSCGAY 239
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT + TD G +++++G G G LG G +D P +V
Sbjct: 240 HTAVRTDAG-RVYTFGAGSLGALGHGDLVDQEIPRLV 275
>gi|417405695|gb|JAA49551.1| Putative e3 ubiquitin-protein ligase herc3 [Desmodus rotundus]
Length = 1050
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|403273887|ref|XP_003928729.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Saimiri boliviensis boliviensis]
Length = 979
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|402880677|ref|XP_003903924.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Papio anubis]
Length = 1057
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIIQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 IQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I +QVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------IQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|403273885|ref|XP_003928728.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Saimiri boliviensis boliviensis]
Length = 1057
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|402880675|ref|XP_003903923.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Papio anubis]
Length = 1049
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIIQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 IQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I +QVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------IQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|145351110|ref|XP_001419929.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580162|gb|ABO98222.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 783
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 112/253 (44%), Gaps = 49/253 (19%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G VV+V+CG H + G C++WG + LG GDRE + P+ +ETF
Sbjct: 194 GVKVVQVSCGPCHTACVTETG--------ACFTWGEGSFYALGHGDRECQRAPRELETFR 245
Query: 186 QDSPWAVYEVTCGSFHTALL------THRKRPN-------DMLESMCWTFGLGENGQLGH 232
+D+ V V CG +HTA + T RK P D ++ +T+G GE+GQLG
Sbjct: 246 RDN-RVVLRVACGVWHTAAIVAAVGNTIRKVPVVADDDEFDTVDGELFTWGDGESGQLGI 304
Query: 233 GTTQSALVPEQVKEL--PQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPN 286
+ A VP + + +V CG HT ++S GDVW G ++ L +
Sbjct: 305 RGVEEASVPTATSDQLGKPGSEVCNVSCGQHHTVALTSKGDVWLAGCVGKVDNSLRVKVF 364
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
L E G + V G H V T DG +++SWG G++G
Sbjct: 365 TRLPNFETGSVSA-------------------VESGDNHVVAATRDG-RVFSWGVGKNGR 404
Query: 347 LGTGKT-IDFFAP 358
LG GK D AP
Sbjct: 405 LGHGKNDRDKAAP 417
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHT 128
+ + + G LA AGA++ WG G L S+ P+ V + G
Sbjct: 74 LDVVEIAIGARHGLARTRAGAVYSWGE------GAGGKLGLPSAQDAEMPTRV-ELDGRA 126
Query: 129 VVKVACGSEHVVALV-SAGETYKGEDLVCYSWGANNNGQLGLGDRESR---LRPKIIETF 184
V +ACG H +A+V A + G+ WG N LG E+R P I +F
Sbjct: 127 VT-LACGVAHSLAVVRDADASSDGDGGDACVWGDPNAAPGLLGRPEARAVTFFPGKI-SF 184
Query: 185 NQDSPWA-----VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
DS A V +V+CG HTA +T C+T+G G LGHG +
Sbjct: 185 AMDSISAGGGVKVVQVSCGPCHTACVTE--------TGACFTWGEGSFYALGHGDRECQR 236
Query: 240 VPEQVKELPQYVYLV-SVDCGLFHTSVVSSA 269
P +++ + +V V CG++HT+ + +A
Sbjct: 237 APRELETFRRDNRVVLRVACGVWHTAAIVAA 267
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 73/176 (41%), Gaps = 37/176 (21%)
Query: 33 GQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG G + VP L G P S ++C+V G ++A+ + G
Sbjct: 300 GQLGIRGVEEASVPTATSDQL--GKPGS-------------EVCNVSCGQHHTVALTSKG 344
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+W+ G D+S V FT P +F +V V G HVVA G
Sbjct: 345 DVWLAGCVGKVDNSLR-----VKVFTRLP--NFETGSVSAVESGDNHVVAATRDGR---- 393
Query: 152 EDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
+SWG NG+LG G DR+ + P+ IE+ + V + CG +A +
Sbjct: 394 ----VFSWGVGKNGRLGHGKNDRD-KAAPEEIESLRGRT---VLRIACGPTSSACV 441
>gi|402880679|ref|XP_003903925.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Papio anubis]
Length = 979
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIIQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 IQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I +QVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------IQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|383456202|ref|YP_005370191.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
gi|380729703|gb|AFE05705.1| RCC1 repeat-containing protein [Corallococcus coralloides DSM 2259]
Length = 806
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 125/288 (43%), Gaps = 43/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ +G SLA+ G +W WG L + G + VS PV V +A
Sbjct: 545 VTALASGTYHSLALKQDGTVWAWG---LNNLGQLGDGTTVSRTEQMPVPGLT--DVTALA 599
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
+ H +AL +D ++WG N++GQLG G SRL P + V
Sbjct: 600 ASTYHSLALK--------QDGTVWTWGYNSSGQLGDGTTASRLTPAQVPGLT-----GVS 646
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G H+ L + W +G +GQLG+G ++ VP QV+ L +
Sbjct: 647 AIAAGLVHSLALKQ--------DGTVWAWGRNTDGQLGNGAAVNSPVPVQVQGL---TGV 695
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
++ G +H+ + G WSWG G G N ++T +++P+ + G
Sbjct: 696 SAIAAGSYHSLALKQDGTAWSWG-RNGTGQLGNETIT-----GSLTPVQVQG-------L 742
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G AH++ + DG +W+WG G LG G T+D AP V
Sbjct: 743 TAVTALAGGDAHSMALLRDG-TVWTWGYNAEGELGDGTTLDRTAPVRV 789
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/278 (27%), Positives = 114/278 (41%), Gaps = 43/278 (15%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+LA+ G +W WG DS G + TP+P+ G V +A G+ H +AL
Sbjct: 505 TLALAQDGTVWGWG---YNDSGQLGDTVDMVRVTPAPLPGLTG--VTALASGTYHSLALK 559
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+D ++WG NN GQLG G SR + V + ++H+
Sbjct: 560 --------QDGTVWAWGLNNLGQLGDGTTVSRTEQMPVPGLTD-----VTALAASTYHSL 606
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L + WT+G +GQLG GTT S L P QV P + ++ GL H+
Sbjct: 607 ALKQ--------DGTVWTWGYNSSGQLGDGTTASRLTPAQV---PGLTGVSAIAAGLVHS 655
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ G VW+WG + L A ++ P+ + G +A G+
Sbjct: 656 LALKQDGTVWAWGRNT------DGQLGNGAAVNSPVPVQVQG-------LTGVSAIAAGS 702
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H++ + DG WSWGR +G LG P V
Sbjct: 703 YHSLALKQDGTA-WSWGRNGTGQLGNETITGSLTPVQV 739
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 133/329 (40%), Gaps = 50/329 (15%)
Query: 38 SGSNSLVPCVIEQFLTIGAPDSLEDDSKTN-HKAPIKICSVKAGGMMSLAIDNAGALWMW 96
SG++ V + L + A S+ + T +P ++ + AGG SL + G W
Sbjct: 406 SGTSLTVTVTVRNALGLSASASMILEGGTPCAPSPRRVTWIAAGGAHSLVVRQDGTADAW 465
Query: 97 GN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVKVACGSEHVVALVSAGETYKGE 152
G+ L D ++ V F P PV G T ++ + H +AL +
Sbjct: 466 GHNGYGQLGDGTS------VDRFLPGPV-QVQGLTGATALSATAYHTLALA--------Q 510
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D + WG N++GQLG R+ P + V + G++H+ L
Sbjct: 511 DGTVWGWGYNDSGQLGDTVDMVRVTPAPLPGLT-----GVTALASGTYHSLALKQ----- 560
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ W +GL GQLG GTT S EQ+ +P + ++ +H+ + G V
Sbjct: 561 ---DGTVWAWGLNNLGQLGDGTTVSRT--EQMP-VPGLTDVTALAASTYHSLALKQDGTV 614
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+WG L + +R ++P + P +A G H++ + D
Sbjct: 615 WTWGYNSSGQLGDGTTASR------LTPAQV-------PGLTGVSAIAAGLVHSLALKQD 661
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +W+WGR G LG G ++ P V
Sbjct: 662 G-TVWAWGRNTDGQLGNGAAVNSPVPVQV 689
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 30/216 (13%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D +WG N GQLG G R P ++ ++ ++HT L
Sbjct: 458 QDGTADAWGHNGYGQLGDGTSVDRFLPGPVQVQGLT---GATALSATAYHTLALAQ---- 510
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ W +G ++GQLG + P LP + ++ G +H+ + G
Sbjct: 511 ----DGTVWGWGYNDSGQLGDTVDMVRVTP---APLPGLTGVTALASGTYHSLALKQDGT 563
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
VW+WG+ L +++R E P+ P D +A H++ +
Sbjct: 564 VWAWGLNNLGQLGDGTTVSRTEQ----MPV---------PGLTDVTALAASTYHSLALKQ 610
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
DG +W+WG SG LG G T PA V P LT
Sbjct: 611 DG-TVWTWGYNSSGQLGDGTTASRLTPAQV--PGLT 643
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 75/177 (42%), Gaps = 32/177 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFTPSPVWDFHGHTVV 130
+ ++ AG + SLA+ G +W WG +T+G + V+S P V G V
Sbjct: 645 VSAIAAGLVHSLALKQDGTVWAWGR------NTDGQLGNGAAVNSPVPVQVQGLTG--VS 696
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A GS H +AL +D +SWG N GQLG L P ++
Sbjct: 697 AIAAGSYHSLALK--------QDGTAWSWGRNGTGQLGNETITGSLTPVQVQGLT----- 743
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
AV + G H+ L + + WT+G G+LG GTT P +V+ L
Sbjct: 744 AVTALAGGDAHSMAL--------LRDGTVWTWGYNAEGELGDGTTLDRTAPVRVQGL 792
>gi|403332050|gb|EJY65013.1| hypothetical protein OXYTRI_14837 [Oxytricha trifallax]
gi|403356523|gb|EJY77858.1| hypothetical protein OXYTRI_00501 [Oxytricha trifallax]
Length = 489
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/303 (25%), Positives = 130/303 (42%), Gaps = 51/303 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-----LVSSFTPSPVWDFHGHT 128
I V A G +S A+ + G ++ WG S + S L+ + +P F
Sbjct: 133 IIQVNASGDISAAVTSQGQIYTWGKTRGGSLSQQKSLSRATNLLLPTLIVAPEVQF---- 188
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG---DRESRLR---PKIIE 182
V+VACG H+ + G+ +WG + G+LG +ES+ + P+
Sbjct: 189 -VQVACGKTHLAGVTKDGK--------LITWGNPDQGKLGHNAQLQQESKNKSYSPRSYA 239
Query: 183 TFNQDS-------PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+N + + + +CG HTA LT + +T+G G+NG LGHG
Sbjct: 240 DYNAINFVGGALESKKIIQASCGFQHTACLTQ--------DGEVYTWGFGKNGALGHGNW 291
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+P++V+ L +V +DCG+ +T + G+++SWG + T++
Sbjct: 292 DQVDLPKKVEGLSN---IVKIDCGMDYTFALDKDGNIYSWGSNR----YGQLGTTQSNIN 344
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
PI + PHG V ++CG H+ + D G + + WG G G LG + +
Sbjct: 345 KHNVPIQLQ--LPHGSSH--VVDISCGEEHSAFLNDKG-EAFIWGYGNDGQLGHKEKTNL 399
Query: 356 FAP 358
P
Sbjct: 400 NQP 402
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 80/312 (25%), Positives = 131/312 (41%), Gaps = 67/312 (21%)
Query: 70 AP-IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS------SFTPSPVW 122
AP ++ V G + G L WGN PD G + + S++P
Sbjct: 183 APEVQFVQVACGKTHLAGVTKDGKLITWGN---PDQGKLGHNAQLQQESKNKSYSPRSYA 239
Query: 123 DFHG----------HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
D++ +++ +CG +H L GE Y +WG NG LG G+
Sbjct: 240 DYNAINFVGGALESKKIIQASCGFQHTACLTQDGEVY--------TWGFGKNGALGHGNW 291
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ PK +E + + ++ CG +T L + +++G GQLG
Sbjct: 292 DQVDLPKKVEGLSN-----IVKIDCGMDYTFALDK--------DGNIYSWGSNRYGQLG- 337
Query: 233 GTTQSAL----VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD--VWSWGMEKGLGLCPN 286
TTQS + VP Q++ ++V + CG H++ ++ G+ +W +G + LG
Sbjct: 338 -TTQSNINKHNVPIQLQLPHGSSHVVDISCGEEHSAFLNDKGEAFIWGYGNDGQLGHKEK 396
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSG 345
+L N P +F +P++ V CG HT ++T G KL+ +GRGR G
Sbjct: 397 TNL----------------NQPKKLEFTEPLRRVVCGGGHTGVITTAG-KLFLFGRGRDG 439
Query: 346 VLGTGKTIDFFA 357
LG G + A
Sbjct: 440 QLGRGDVNESMA 451
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 216 ESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ + ++G G+NGQLG+G T S +P V+ L ++ V+ ++ V+S G +++
Sbjct: 96 QKLLLSWGNGQNGQLGNGNETLSLSIPSPVQVLSDE-DIIQVNASGDISAAVTSQGQIYT 154
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG +G L SL+R A + + P LI P+ Q VQVACG H VT DG
Sbjct: 155 WGKTRGGSLSQQKSLSR--ATNLLLPTLIV-----APEVQ-FVQVACGKTHLAGVTKDG- 205
Query: 335 KLWSWGRGRSGVLG 348
KL +WG G LG
Sbjct: 206 KLITWGNPDQGKLG 219
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 86/206 (41%), Gaps = 30/206 (14%)
Query: 158 SWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
SWG NGQLG G+ L P ++ + + + +V +A +T +
Sbjct: 101 SWGNGQNGQLGNGNETLSLSIPSPVQVLSDED---IIQVNASGDISAAVTS--------Q 149
Query: 217 SMCWTFGLGENGQLGHGTTQSA----LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+T+G G L + S L+P + + V V V CG H + V+ G +
Sbjct: 150 GQIYTWGKTRGGSLSQQKSLSRATNLLLPTLI--VAPEVQFVQVACGKTHLAGVTKDGKL 207
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISP--------ILISGNGPHGPKFQDPVQVACGAA 324
+WG L NA L + + SP I G K +Q +CG
Sbjct: 208 ITWGNPDQGKLGHNAQLQQESKNKSYSPRSYADYNAINFVGGALESKKI---IQASCGFQ 264
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTG 350
HT +T DG ++++WG G++G LG G
Sbjct: 265 HTACLTQDG-EVYTWGFGKNGALGHG 289
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 79/182 (43%), Gaps = 28/182 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVKV 132
I + G + A+D G ++ WG+ T ++ P + HG + VV +
Sbjct: 306 IVKIDCGMDYTFALDKDGNIYSWGSNRYGQLGTTQS-NINKHNVPIQLQLPHGSSHVVDI 364
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG EH L GE + WG N+GQLG ++ + +PK +E F + +
Sbjct: 365 SCGEEHSAFLNDKGE--------AFIWGYGNDGQLGHKEKTNLNQPKKLE-FTE----PL 411
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV-----PEQVKEL 247
V CG HT ++T + + FG G +GQLG G ++ P++V +
Sbjct: 412 RRVVCGGGHTGVITTAGK--------LFLFGRGRDGQLGRGDVNESMAAFRIEPKEVVNI 463
Query: 248 PQ 249
Q
Sbjct: 464 SQ 465
>gi|355562563|gb|EHH19157.1| hypothetical protein EGK_19807 [Macaca mulatta]
Length = 1054
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIIQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 IQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I +QVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------IQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|383411601|gb|AFH29014.1| putative E3 ubiquitin-protein ligase HERC4 isoform b [Macaca
mulatta]
Length = 1049
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIIQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 IQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I +QVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------IQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|149730315|ref|XP_001489590.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Equus
caballus]
Length = 551
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 115/251 (45%), Gaps = 33/251 (13%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G V ++ GS HVV S GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKVACLSYGSGPHVVLATSEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKRVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVVNIACGQMCSMAVVDTGEVYVWGYSG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q + ACG AHT+++TD+G +++ WG G LGTG
Sbjct: 241 GSGNQPTPCRVA--ALQGIRVQ---RAACGYAHTLVLTDEG-QVYVWGANSYGQLGTGNK 294
Query: 353 ID--FFAPAIV 361
+ + P IV
Sbjct: 295 SNQPYPTPIIV 305
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE ++WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEV--------FAWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVNIACGQMCSMAVV------DTGEVYVW--GYSGNGQLGLGGSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + CG HT V++ G V+ WG N G L +GN
Sbjct: 255 QGIRVQRAACGYAHTLVLTDEGQVYVWGA--------------NSYGQ-----LGTGNKS 295
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ P + P+ V AC + HT G ++ WG RG+S VL T
Sbjct: 296 NQP-YPTPIIVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFSCTD 354
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W LT E
Sbjct: 355 DVFACFASPAVSWRLLTVE 373
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 17/111 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG S G L S TP V G V
Sbjct: 207 VVNIACGQMCSMAVVDTGEVYVWG------YSGNGQLGLGGSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
+ ACG H + L G+ Y WGAN+ GQLG G++ ++ P I
Sbjct: 261 RAACGYAHTLVLTDEGQVY--------VWGANSYGQLGTGNKSNQPYPTPI 303
>gi|345795744|ref|XP_535653.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Canis lupus
familiaris]
Length = 1050
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 140/296 (47%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG + S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEYPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGAKGQLGTGHTCNVKCPSPV 341
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEYPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGAKGQLGTGHTCNVKCPSPVK 342
>gi|444729789|gb|ELW70193.1| putative E3 ubiquitin-protein ligase HERC3 [Tupaia chinensis]
Length = 983
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDQGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ + + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDQGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|397520491|ref|XP_003830350.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pan paniscus]
gi|410221280|gb|JAA07859.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259924|gb|JAA17928.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|168058364|ref|XP_001781179.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162667416|gb|EDQ54047.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 466
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 90/339 (26%), Positives = 138/339 (40%), Gaps = 80/339 (23%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ S + G++S+AI G+LW WG G ++ + TP V G VV+
Sbjct: 135 VEVVSARGSGVVSMAIARDGSLWTWGKSKRGQLGL--GTKIMYAQTPKRVEALVGQQVVQ 192
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG--LGDRES------RLRPKIIET 183
VA G H +A + G YSWG NG+LG L D ES + P I
Sbjct: 193 VALGWGHALARTAEGHV--------YSWGYAANGRLGFQLSDSESAETSVKKTSPTAIAR 244
Query: 184 FNQDS---------------------PWA-----------VYEVTCGSFHTALLTHRKRP 211
+ +S W V E++CG H+ L +
Sbjct: 245 VDNESIEEAAYRQVLEDMEKEKSPVLAWEPVRINSLCSQHVTEISCGMDHSLTLNEKGE- 303
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSAL---------VPEQVKELPQYVYLVSVDCGLFH 262
+C +FG GQLG T SA+ + V+ L + ++ V GL H
Sbjct: 304 ------LC-SFGDNSLGQLGRSTAISAVQSSIFAVENSEDHVQGLIRGEKVLHVGAGLGH 356
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+ V++ G ++SWG G L R+E D+ P + D V + G
Sbjct: 357 SLAVTAQGSIYSWGWNAG------HQLGRDERQDSSLPACVE------DVEGDVVALVGG 404
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
AH++ +T G +LW WG G++G LG G D +P ++
Sbjct: 405 RAHSLALTSQG-QLWVWGSGKNGRLGLGSPADEPSPLLL 442
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 22/165 (13%)
Query: 199 SFHTALLTHRKR---PNDMLESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYVYL 253
+FHT LT R ++ +FG G +G LGH A P ++ LP+ V
Sbjct: 25 AFHTGRLTQFGRDFGTTIAKKTRVLSFGDGSHGALGHTDCFGGDAYEPREINGLPEDV-- 82
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
VSV G +H+ V+ G++W+WG L TR + + P +
Sbjct: 83 VSVGAGHYHSMAVAQTGELWAWGRNLEGQLGERDGNTREKW-----------HQPQRVRG 131
Query: 314 QDPVQVACGAAHTVL---VTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ V+V V+ + DG LW+WG+ + G LG G I +
Sbjct: 132 LESVEVVSARGSGVVSMAIARDG-SLWTWGKSKRGQLGLGTKIMY 175
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 28/209 (13%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS--FTPSPVW 122
+ N + + G SL ++ G L +G+ L S V S F
Sbjct: 276 RINSLCSQHVTEISCGMDHSLTLNEKGELCSFGDNSLGQLGRSTAISAVQSSIFAVENSE 335
Query: 123 D-----FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
D G V+ V G H +A+ + G Y SWG N QLG +R+
Sbjct: 336 DHVQGLIRGEKVLHVGAGLGHSLAVTAQGSIY--------SWGWNAGHQLGRDERQDSSL 387
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P +E D V + G H+ LT + W +G G+NG+LG G+
Sbjct: 388 PACVEDVEGD----VVALVGGRAHSLALTS--------QGQLWVWGSGKNGRLGLGSPAD 435
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
P ++ L + + V CG H+ ++
Sbjct: 436 EPSPLLLESLENHC-IAEVACGFDHSLIL 463
Score = 46.6 bits (109), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 51/173 (29%), Positives = 75/173 (43%), Gaps = 22/173 (12%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG S + S V +I A ++ ED + + K+ V AG SLA+ G+
Sbjct: 313 GQLGRSTAISAVQS------SIFAVENSEDHVQGLIRGE-KVLHVGAGLGHSLAVTAQGS 365
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
++ WG G S P+ V D G VV + G H +AL S G+
Sbjct: 366 IYSWG---WNAGHQLGRDERQDSSLPACVEDVEG-DVVALVGGRAHSLALTSQGQ----- 416
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
+ WG+ NG+LGLG P ++E+ + EV CG H+ +L
Sbjct: 417 ---LWVWGSGKNGRLGLGSPADEPSPLLLESLENH---CIAEVACGFDHSLIL 463
Score = 42.0 bits (97), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 121/339 (35%), Gaps = 74/339 (21%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + SV AG S+A+ G LW WG G + P V +V
Sbjct: 79 PEDVVSVGAGHYHSMAVAQTGELWAWGRNLEGQLGERDGNTREKWHQPQRVRGL--ESVE 136
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSP 189
V+ VV++ A D ++WG + GQLGLG + + PK +E
Sbjct: 137 VVSARGSGVVSMAIA------RDGSLWTWGKSKRGQLGLGTKIMYAQTPKRVEALVGQQ- 189
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-P 248
V +V G H T E +++G NG+LG + S VK+ P
Sbjct: 190 --VVQVALGWGHALART--------AEGHVYSWGYAANGRLGFQLSDSESAETSVKKTSP 239
Query: 249 QYV-----------------------------------------YLVSVDCGLFHTSVVS 267
+ ++ + CG+ H+ ++
Sbjct: 240 TAIARVDNESIEEAAYRQVLEDMEKEKSPVLAWEPVRINSLCSQHVTEISCGMDHSLTLN 299
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAI--SPILISGNGPHGP---KFQDPVQVACG 322
G++ S+G + LG L R+ A A+ S + + H + + + V G
Sbjct: 300 EKGELCSFG-DNSLG-----QLGRSTAISAVQSSIFAVENSEDHVQGLIRGEKVLHVGAG 353
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H++ VT G ++SWG LG + D PA V
Sbjct: 354 LGHSLAVTAQG-SIYSWGWNAGHQLGRDERQDSSLPACV 391
>gi|114630760|ref|XP_001167652.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 4
[Pan troglodytes]
Length = 979
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|114630758|ref|XP_001167783.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 9
[Pan troglodytes]
gi|410295450|gb|JAA26325.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333083|gb|JAA35488.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1049
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|114630750|ref|XP_001167753.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 8
[Pan troglodytes]
gi|410295452|gb|JAA26326.1| hect domain and RLD 4 [Pan troglodytes]
gi|410333085|gb|JAA35489.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|313221348|emb|CBY32102.1| unnamed protein product [Oikopleura dioica]
Length = 1199
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 94/311 (30%), Positives = 136/311 (43%), Gaps = 43/311 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP-VWDFHGH-TVV 130
+I V AG S+AI +G L+ WG S G P + D H +VV
Sbjct: 82 EIFHVAAGDFFSIAIAESGLLFGWGR------SLNGELMCKQDSLHEPKLLDKIMHWSVV 135
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDSP 189
+VACG++H +AL G SWG+N GQLGLG E L P II + N
Sbjct: 136 QVACGAQHCIALTEEG--------TILSWGSNTQGQLGLGSSEIEFLEPTIIASLN---A 184
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELP 248
+ + ++ G++H+ +L+ P+ L +T+G GQLGHG + S P VK L
Sbjct: 185 FPISQICAGAYHSGVLS----PSGTL----FTWGKNNWGQLGHGNSDSFQSSPRLVKTL- 235
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
++ +V V G H+ + G V+SWG N L N + P I
Sbjct: 236 RHQEVVFVAMGEEHSVCRTRNGGVFSWGHGG------NGQLGHNSMANVTQPKKIM--EL 287
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
G Q+ CG HT+ +TD KL +G + LGT P I + LT+
Sbjct: 288 MGTTV---CQICCGRRHTISLTDK-RKLLGFGLNSNNQLGTHNDTSARLP-ITIPISLTD 342
Query: 369 EFKQDELNTGG 379
+ + + GG
Sbjct: 343 DRQLSCIAAGG 353
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 89/214 (41%), Gaps = 45/214 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLGLG + P I D+ +V + G HT LT ++
Sbjct: 2 YGWGKNDYGQLGLGSENMLISCPSPI-----DANQSVISIASGLRHTVYLTSTRK----- 51
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
++ G E GQLG +Q P V + V G F + ++ +G ++ W
Sbjct: 52 ---VYSCGSNEFGQLGQQKSQCR--PSLVTGFGAE-EIFHVAAGDFFSIAIAESGLLFGW 105
Query: 276 GME-KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP------VQVACGAAHTVL 328
G G +C SL H PK D VQVACGA H +
Sbjct: 106 GRSLNGELMCKQDSL-------------------HEPKLLDKIMHWSVVQVACGAQHCIA 146
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIV 361
+T++G + SWG G LG G + I+F P I+
Sbjct: 147 LTEEG-TILSWGSNTQGQLGLGSSEIEFLEPTII 179
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
PS V F + VA G +A+ +G + + WG + NG+L + ++S
Sbjct: 72 PSLVTGFGAEEIFHVAAGDFFSIAIAESG--------LLFGWGRSLNGEL-MCKQDSLHE 122
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
PK+++ W+V +V CG+ H LT E ++G GQLG G+++
Sbjct: 123 PKLLDKIMH---WSVVQVACGAQHCIALTE--------EGTILSWGSNTQGQLGLGSSEI 171
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAG 295
+ + + + G +H+ V+S +G +++WG LG + S
Sbjct: 172 EFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQS---- 227
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
SP L+ + Q+ V VA G H+V T +G ++SWG G +G LG +
Sbjct: 228 ---SPRLVKT-----LRHQEVVFVAMGEEHSVCRTRNG-GVFSWGHGGNGQLGHNSMANV 278
Query: 356 FAPAIVL 362
P ++
Sbjct: 279 TQPKKIM 285
>gi|449280356|gb|EMC87683.1| RCC1 and BTB domain-containing protein 1 [Columba livia]
Length = 531
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS HVV GE Y +WG N QLG G
Sbjct: 61 STIVPKKLEALCGKKISSLSYGSGPHVVLCTEDGEVY--------AWGHNGYSQLGNGTT 112
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ P ++ V EV CGS H+ L+ + + +G GQ+G
Sbjct: 113 NQGITP--VQVCTNLLIKKVVEVACGSHHSMALS--------FDGDLYAWGYNNCGQVGS 162
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + P +V Q +V + CG + V S G+V+ WG N L
Sbjct: 163 GSTANQPTPRRVSNCLQGKMVVGIACGQTSSMAVVSNGEVYGWGYNG------NGQLGLG 216
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ ++P ++ HG +Q+ACG AHT+ +TD+G L++WG G LGTG
Sbjct: 217 NNGNQLTPCRVA--ALHGVCI---LQIACGYAHTLALTDEGL-LYAWGANTYGQLGTGNK 270
Query: 353 IDFFAPAIVL 362
+ +P ++
Sbjct: 271 SNQLSPVQIM 280
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 81/321 (25%), Positives = 127/321 (39%), Gaps = 52/321 (16%)
Query: 91 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ WG+ L + +T G + V T + VV+VACGS H +AL G+
Sbjct: 94 GEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLI-----KKVVEVACGSHHSMALSFDGD 148
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
Y +WG NN GQ+G G ++ P+ + Q V + CG + +
Sbjct: 149 LY--------AWGYNNCGQVGSGSTANQPTPRRVSNCLQGK--MVVGIACGQTSSMAVVS 198
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ +G NGQLG G + L P +V L V ++ + CG HT ++
Sbjct: 199 NGE--------VYGWGYNGNGQLGLGNNGNQLTPCRVAAL-HGVCILQIACGYAHTLALT 249
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
G +++WG L + +SP+ I + AC +AHT
Sbjct: 250 DEGLLYAWGANT------YGQLGTGNKSNQLSPVQIMMEKERVVEI-----AACHSAHTS 298
Query: 328 LVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 378
+++ WG RG+S +L T FA V+W L+ E +D L
Sbjct: 299 AAKTQSGQVYMWGQCRGQSVILPHLTHFACTDDVFACFATPAVMWRLLSVE-HEDFLTVA 357
Query: 379 GLDDEIKTKDLEGAEERDEKL 399
E K+ + E D K
Sbjct: 358 ----ESLKKEFDSPETSDLKF 374
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS +VP++++ L + + +S G H + + G+V++WG
Sbjct: 44 FVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKISSLSYGSGP-HVVLCTEDGEVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + V+VACG+ H++ ++ DG L++
Sbjct: 103 G------YSQLGNGTTNQGITPVQVCTN----LLIKKVVEVACGSHHSMALSFDG-DLYA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRRV 174
>gi|380792513|gb|AFE68132.1| RCC1 and BTB domain-containing protein 2, partial [Macaca mulatta]
Length = 369
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 113/249 (45%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLSGKKIASLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCQIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 295 SNQSYPTPV 303
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 96/225 (42%), Gaps = 40/225 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V++WG G G N S + I I+
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGANSYGQLGTGNKSNQSYPTPVTMEKDRIIEIA 314
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
AC + HT G ++ WG RG+S +L
Sbjct: 315 ---------------ACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 344
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 64/134 (47%), Gaps = 22/134 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TMEKDR-- 309
Query: 191 AVYEV-TCGSFHTA 203
+ E+ C S HT+
Sbjct: 310 -IIEIAACHSTHTS 322
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 72/143 (50%), Gaps = 15/143 (10%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
F LG N G LG G QS + P ++ L + + +S G H + ++ G+V++WG
Sbjct: 68 FVLGTNCCGCLGLGDVQSTIEPRRLDSLSGKKIASLSYGSGP-HIVLATTEGEVFTWGHN 126
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L + P IS N + + ++VACG+ H++++T DG ++++
Sbjct: 127 A------YSQLGNGTTNHGLVPCQISTNLSN----KQVIEVACGSYHSLVLTSDG-EVFA 175
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG SG +G+G T++ P V
Sbjct: 176 WGYNNSGQVGSGSTVNQPIPRRV 198
>gi|281344274|gb|EFB19858.1| hypothetical protein PANDA_001437 [Ailuropoda melanoleuca]
Length = 1050
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.2 bits (165), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|397520493|ref|XP_003830351.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pan paniscus]
gi|410221282|gb|JAA07860.1| hect domain and RLD 4 [Pan troglodytes]
gi|410259926|gb|JAA17929.1| hect domain and RLD 4 [Pan troglodytes]
Length = 1057
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|397520495|ref|XP_003830352.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Pan paniscus]
Length = 979
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|63025188|ref|NP_071362.1| probable E3 ubiquitin-protein ligase HERC4 isoform a [Homo sapiens]
gi|74707832|sp|Q5GLZ8.1|HERC4_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC4; AltName:
Full=HECT domain and RCC1-like domain-containing protein
4
gi|37900475|gb|AAO65480.1| HECT and RCC1 containing protein 4 isoform 1 [Homo sapiens]
gi|119574649|gb|EAW54264.1| hect domain and RLD 4, isoform CRA_d [Homo sapiens]
Length = 1057
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|37620181|ref|NP_056416.2| probable E3 ubiquitin-protein ligase HERC4 isoform b [Homo sapiens]
gi|24659293|gb|AAH39600.1| Hect domain and RLD 4 [Homo sapiens]
gi|119574646|gb|EAW54261.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|119574648|gb|EAW54263.1| hect domain and RLD 4, isoform CRA_b [Homo sapiens]
gi|325463745|gb|ADZ15643.1| hect domain and RLD 4 [synthetic construct]
Length = 1049
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|426364910|ref|XP_004049534.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Gorilla gorilla gorilla]
Length = 1049
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F + +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---IRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|410975285|ref|XP_003994063.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like, partial
[Felis catus]
Length = 621
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/276 (28%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCKKQASPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ + + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLRTQK---IVYICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQASPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RTQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 42.0 bits (97), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|426364914|ref|XP_004049536.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Gorilla gorilla gorilla]
Length = 979
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F + +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---IRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|296196017|ref|XP_002745644.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Callithrix jacchus]
Length = 1050
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|440796662|gb|ELR17771.1| protein kinase domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 972
Score = 87.4 bits (215), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 127/288 (44%), Gaps = 44/288 (15%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
AP + S+ AG S+A+++ G + WG P S +G + PSP+
Sbjct: 33 APSDLISLHAGWNCSVAVNSEGTPYFWGTMP---SKYDGKAKFLE---PSPL------PA 80
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ + H L+ A T ED YS+G G+LG G + PK +E +
Sbjct: 81 ISIGFKLAHRRMLM-APTTTAVEDGTAYSFGQGEWGKLGHGGAANEQHPKQLEVQGK--- 136
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ G H+ LLT +TFG G GQLGHGT + P++V+ L +
Sbjct: 137 --VTQIGVGDQHSVLLTDG--------GHVYTFGQGIYGQLGHGTRKDLDRPKRVEALVR 186
Query: 250 -YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK---GLGLCPNASLTRNEAGDAISPILISG 305
+ S+ G T +++ G V SWG + G P+ E G + I
Sbjct: 187 AQQTITSIGVGFDQTFAINADGVVHSWGRQGPWLGHAAQPDHVKQPQEVGLLKNKAKI-- 244
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+QVA G HT+L+T DG K++S G+ + G LG GKT+
Sbjct: 245 -----------MQVAAGKQHTLLLTIDG-KVYSMGKNKDGCLGQGKTV 280
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 85/209 (40%), Gaps = 41/209 (19%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWG-------NCPLPDSSTEGGFSLVSSFTPSPV 121
+A I S+ G + AI+ G + WG + PD + P V
Sbjct: 186 RAQQTITSIGVGFDQTFAINADGVVHSWGRQGPWLGHAAQPDHVKQ----------PQEV 235
Query: 122 WDFHGHT-VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD--RESRLRP 178
+++VA G +H + L G+ YS G N +G LG G ++ P
Sbjct: 236 GLLKNKAKIMQVAAGKQHTLLLTIDGK--------VYSMGKNKDGCLGQGKTVKKETANP 287
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
I + N + + +V G H+ +L + TFG G NG+LGHG T++
Sbjct: 288 MPITSLNN---YVITQVAAGEKHSVVLAS--------DGSVLTFGSGSNGRLGHGDTKNQ 336
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
VP V+ + + ++ G HT V++
Sbjct: 337 DVPRTVQGV--FDKACAIAAGFEHTIVLT 363
>gi|426364912|ref|XP_004049535.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Gorilla gorilla gorilla]
Length = 1057
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F + +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---IRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.9 bits (102), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRIRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|55832181|gb|AAV66579.1| HECT and RCC1 containing protein 4 isoform 3 [Homo sapiens]
Length = 979
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|426231463|ref|XP_004009758.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Ovis aries]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGRNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVVAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + GAN GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGANTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ + + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IVHVACGESHSLALSDQGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QV G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVVAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVVAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|158259079|dbj|BAF85498.1| unnamed protein product [Homo sapiens]
Length = 1027
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSTFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSTFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|327268361|ref|XP_003218966.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Anolis carolinensis]
Length = 788
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 146/343 (42%), Gaps = 80/343 (23%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLGF N++ P ++ P K+ G +L G
Sbjct: 65 GQLGFGSKNAVNKPTCVKAL------------------KPEKVKLAACGRNHTLICTEQG 106
Query: 92 ALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
++ G L D+ F L+S FT H + ++A GS L G
Sbjct: 107 NVYAAGGNSEGQLGLGDTEERSTFHLISFFTKQ-------HKIKQLAAGSYTSAVLTEDG 159
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ LV WG N+ GQ+GLGD+ P + D V ++CG +H+AL+T
Sbjct: 160 Q------LVM--WGDNSEGQIGLGDKAYVSVPHQV-----DIGKPVSCISCGYYHSALIT 206
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK--ELPQYVYLVS-----VDCG 259
+ +TFG ENG+LG L P+Q+K +LPQ V +S V CG
Sbjct: 207 Q--------DGELYTFGEPENGKLG-------LSPKQLKNHKLPQLVSGISGKVSKVACG 251
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
HT VV + GDV+++G+ + G + + + P + G H +
Sbjct: 252 GGHT-VVLAEGDVYTFGLGQ-YGQLGHGTFVF----ETSEPKTVDHLGKH-----KICHI 300
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT--IDFFAPAI 360
ACG HT L+T++G ++++G GR G LG G+ + F P +
Sbjct: 301 ACGENHTALITENGL-MYTFGDGRHGKLGLGEENYTNQFVPTL 342
>gi|7657152|ref|NP_055421.1| probable E3 ubiquitin-protein ligase HERC3 isoform 1 [Homo sapiens]
gi|397480079|ref|XP_003811323.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Pan paniscus]
gi|426344933|ref|XP_004039158.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Gorilla gorilla gorilla]
gi|2495699|sp|Q15034.1|HERC3_HUMAN RecName: Full=Probable E3 ubiquitin-protein ligase HERC3; AltName:
Full=HECT domain and RCC1-like domain-containing protein
3
gi|119626429|gb|EAX06024.1| hect domain and RLD 3 [Homo sapiens]
gi|158261003|dbj|BAF82679.1| unnamed protein product [Homo sapiens]
gi|168274306|dbj|BAG09573.1| E3 ubiquitin-protein ligase HERC3 [synthetic construct]
gi|187252515|gb|AAI66672.1| Hect domain and RLD 3 [synthetic construct]
gi|410211922|gb|JAA03180.1| hect domain and RLD 3 [Pan troglodytes]
gi|410261200|gb|JAA18566.1| hect domain and RLD 3 [Pan troglodytes]
gi|410295580|gb|JAA26390.1| hect domain and RLD 3 [Pan troglodytes]
gi|410339519|gb|JAA38706.1| hect domain and RLD 3 [Pan troglodytes]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|402869928|ref|XP_003898995.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Papio anubis]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|348563446|ref|XP_003467518.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Cavia
porcellus]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDQGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALATDGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 106/239 (44%), Gaps = 42/239 (17%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG +H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGDHCVFLLEDGEVY--------TCGLNTKGQLG-HEREGNQPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ + + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDQGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISG 305
L Q ++ V CG +H +++ G ++WG +N G + S
Sbjct: 134 LNQQT-ILQVSCGNWHCLALATDGQFFTWG--------------KNSHGQLGLGKEFPSQ 178
Query: 306 NGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P + + + QVA G AH+ ++ G ++ WG +G LG D +P V
Sbjct: 179 TSPQRVRSLEGIPLAQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCHV 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|332233510|ref|XP_003265945.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 1
[Nomascus leucogenys]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|226495691|ref|NP_001141854.1| uncharacterized protein LOC100273996 [Zea mays]
gi|194706180|gb|ACF87174.1| unknown [Zea mays]
Length = 391
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/365 (27%), Positives = 154/365 (42%), Gaps = 66/365 (18%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK---TNHKAPIKICSVKAGGM 82
SL C DG+L G N Q T+G P + +S + A +KI GG
Sbjct: 53 SLAICEDGRLFTWGWN--------QRGTLGHPPKTKTESSPGPVHALAGLKIVQAAIGGW 104
Query: 83 MSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 137
LA+D+ G + WG C E G + P+P V +VA G
Sbjct: 105 HCLAVDDNGHAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCAPKLKVRQVAAGGT 164
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
H V L G ++WG GD + P ++ + V +
Sbjct: 165 HSVVLTQEGH--------VWTWGQ----PWPPGDIKQISTPVRVQGLEK-----VRVIAV 207
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
G+FH LT + + W +G E GQLG G TQ P +V+ L + LV +
Sbjct: 208 GAFHNLALTE--------DGILWAWGNNEYGQLGTGDTQPRSHPIRVEGLSD-LSLVDIA 258
Query: 258 CGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPI---LISGNGPHGPK 312
G +H++ ++ G+V++WG E G LG + S + P+ L++G
Sbjct: 259 AGGWHSTALTIQGEVYAWGRGEHGRLGFGDDKS-------SRMVPLKVELLAG------- 304
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA---IVLWPPLTEE 369
+D VQV+CG H+V +T DG +++S+GRG G LG G+ + P I L PP T
Sbjct: 305 -EDIVQVSCGGTHSVALTRDG-RMFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTRS 362
Query: 370 FKQDE 374
+ +
Sbjct: 363 SRDGQ 367
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 84/187 (44%), Gaps = 21/187 (11%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLG+G E + +E +AV V GS ++ + R
Sbjct: 12 AWGSGEDGQLGMGGNEEKDWAHCVEALGS---YAVTAVVAGSRNSLAICEDGR------- 61
Query: 218 MCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ P V L + +V G +H V G ++WG
Sbjct: 62 -LFTWGWNQRGTLGHPPKTKTESSPGPVHALAG-LKIVQAAIGGWHCLAVDDNGHAYAWG 119
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPH--GPKFQDPVQVACGAAHTVLVTDDGY 334
+ G C + + A+ + + P PK + QVA G H+V++T +G+
Sbjct: 120 GNE-YGQCGEEPERKEDGTRALRRDIPT---PQRCAPKLK-VRQVAAGGTHSVVLTQEGH 174
Query: 335 KLWSWGR 341
+W+WG+
Sbjct: 175 -VWTWGQ 180
Score = 44.7 bits (104), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/139 (25%), Positives = 57/139 (41%), Gaps = 18/139 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + + AGG S A+ G ++ WG G S P V G +V+
Sbjct: 252 LSLVDIAAGGWHSTALTIQGEVYAWGRGE--HGRLGFGDDKSSRMVPLKVELLAGEDIVQ 309
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-------- 183
V+CG H VAL G +S+G ++G+LG G + + +P ++
Sbjct: 310 VSCGGTHSVALTRDGR--------MFSYGRGDHGRLGYGRKLTTGQPMGVDIDLPPPKTR 361
Query: 184 FNQDSPWAVYEVTCGSFHT 202
++D W V CG HT
Sbjct: 362 SSRDGQWQAKYVACGGRHT 380
>gi|386780812|ref|NP_001248295.1| probable E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355687450|gb|EHH26034.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|355749437|gb|EHH53836.1| Putative E3 ubiquitin-protein ligase HERC3 [Macaca fascicularis]
gi|380817668|gb|AFE80708.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
gi|383408291|gb|AFH27359.1| putative E3 ubiquitin-protein ligase HERC3 [Macaca mulatta]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|428163598|gb|EKX32661.1| hypothetical protein GUITHDRAFT_148483 [Guillardia theta CCMP2712]
Length = 407
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 41/265 (15%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H ++I V G SLA+D G LW WG C G S P V
Sbjct: 40 HLRGVRIVEVACGSSHSLAVDENGGLWGWG-CHKFGQLGLGDVGQESLKLPHQVDLLRST 98
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR----------ESRLR 177
+ VA G +H +AL S G + +SWG N G LG G+ +S L
Sbjct: 99 LIASVAAGDKHSIALSSQG--------IVFSWGLNGYGCLGAGNARKNYPDFVEDDSLLF 150
Query: 178 PKIIETFNQDSPW----AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P+ NQ + ++ ++ G FH+A + + + +T+G G GQLG G
Sbjct: 151 PEPFRVCNQPTRVNIEDSIAAISAGLFHSAAVGEKGK--------LYTWGKGGEGQLGSG 202
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
VP VK+L ++ + CG FHT+ +++ G+++ WG L LTR
Sbjct: 203 MMADLYVPAAVKDL-KHKNITKAACGSFHTAALTNEGELYVWGWAGDCNL-----LTRER 256
Query: 294 AGDAISPILISGNGPHGPKFQDPVQ 318
+ + + P+L P + +D VQ
Sbjct: 257 SDEPLGPVL----RPRRLQLKDKVQ 277
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQ 249
+ EV CGS H+ + W +G + GQLG G +S +P QV +L +
Sbjct: 46 IVEVACGSSHSLAVDE--------NGGLWGWGCHKFGQLGLGDVGQESLKLPHQV-DLLR 96
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS--------PI 301
+ SV G H+ +SS G V+SWG+ G G C A R D + P
Sbjct: 97 STLIASVAAGDKHSIALSSQGIVFSWGL-NGYG-CLGAGNARKNYPDFVEDDSLLFPEPF 154
Query: 302 LISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ N P +D + ++ G H+ V + G KL++WG+G G LG+G D + PA
Sbjct: 155 RVC-NQPTRVNIEDSIAAISAGLFHSAAVGEKG-KLYTWGKGGEGQLGSGMMADLYVPAA 212
Query: 361 V 361
V
Sbjct: 213 V 213
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 102/239 (42%), Gaps = 53/239 (22%)
Query: 124 FHGH----TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD--RESRLR 177
F GH +V+VACGS H +A+ G + WG + GQLGLGD +ES
Sbjct: 37 FQGHLRGVRIVEVACGSSHSLAVDENGGLW--------GWGCHKFGQLGLGDVGQESLKL 88
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ- 236
P ++ + V G H+ L+ + + +++GL G LG G +
Sbjct: 89 PHQVDLLRST---LIASVAAGDKHSIALSS--------QGIVFSWGLNGYGCLGAGNARK 137
Query: 237 ---------SALVPE--QVKELPQYV----YLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
S L PE +V P V + ++ GLFH++ V G +++WG KG
Sbjct: 138 NYPDFVEDDSLLFPEPFRVCNQPTRVNIEDSIAAISAGLFHSAAVGEKGKLYTWG--KG- 194
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L D P + K ++ + ACG+ HT +T++G +L+ WG
Sbjct: 195 ---GEGQLGSGMMADLYVPAAVKD-----LKHKNITKAACGSFHTAALTNEG-ELYVWG 244
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 43/106 (40%), Gaps = 17/106 (16%)
Query: 57 PDSLEDDSKTNHKAPIKIC-------------SVKAGGMMSLAIDNAGALWMWGNCPLPD 103
PD +EDDS P ++C ++ AG S A+ G L+ WG
Sbjct: 140 PDFVEDDSLL-FPEPFRVCNQPTRVNIEDSIAAISAGLFHSAAVGEKGKLYTWGK---GG 195
Query: 104 SSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
G + + P+ V D + K ACGS H AL + GE Y
Sbjct: 196 EGQLGSGMMADLYVPAAVKDLKHKNITKAACGSFHTAALTNEGELY 241
>gi|403263478|ref|XP_003924058.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Saimiri
boliviensis boliviensis]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 107/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
TV +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 TVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|627469|pir||B38919 hypothetical protein 2 - human (fragment)
gi|40788957|dbj|BAA04945.2| KIAA0032 [Homo sapiens]
Length = 1054
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 90 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 143
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 144 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 194
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 195 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 243
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 244 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 297
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 298 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 345
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 39 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 89
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 90 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 137
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 138 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 195
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 196 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 239
Query: 361 V 361
V
Sbjct: 240 V 240
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 194 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 250
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 251 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 299
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 300 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 346
>gi|337744685|ref|YP_004638847.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
gi|336295874|gb|AEI38977.1| hypothetical protein KNP414_00352 [Paenibacillus mucilaginosus
KNP414]
Length = 1224
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 88/316 (27%), Positives = 127/316 (40%), Gaps = 56/316 (17%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGF 110
L DDS T +P+++ + V AG SLA+ + G +W +G L D +T
Sbjct: 771 LGDDSTTTRYSPVQVSTLTNWTAVSAGENHSLALKSDGTVWAFGYNGYGQLGDGTTS--- 827
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S TP V D G VV +A G + +AL S D +SWG N G+LG G
Sbjct: 828 ---SQRTPVQVKDLTG--VVAIAAGKDFSLALKS--------DGTVWSWGQNTYGELGNG 874
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
P + V + G +H L + + +G NG+L
Sbjct: 875 TTTRSSVPVQVALLTD-----VKAIAAGDYHGVALKK--------DGSVFAWGYNGNGEL 921
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+ +T S P Q + + G +HT + S G VWSWG G G + + T
Sbjct: 922 GNSSTISQSTPVQ----SGVTGIKGIAAGPYHTLALKSDGTVWSWGYN-GYGQLGSGNNT 976
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
AI P +A G ++ +DG L+SWGR +G LG G
Sbjct: 977 SRSVPAAI------------PGLASMASIAAGENQSIAYGNDGI-LYSWGRNANGQLGNG 1023
Query: 351 KTIDFFAPAIVLWPPL 366
T+D P V+ P +
Sbjct: 1024 TTVDTNVPHKVIGPNI 1039
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/317 (27%), Positives = 128/317 (40%), Gaps = 55/317 (17%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLA----------IDNAGALWMWGNCPL 101
T+ A D+ ++S + AP+ + A G + LA I + G +W WG
Sbjct: 661 FTVKAKDTAGNESAAS--APVTAVTSAALGAVPLAVSLLGNHTMFIKSDGTVWGWG---Y 715
Query: 102 PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
G + S+ P V + G ++ A G H VAL S D ++WG
Sbjct: 716 NGHGQLGTGTSNSTSVPGKVINLTGMKMI--AGGENHTVALRS--------DGTLHTWGY 765
Query: 162 NNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
N GQLG +R P + T W V+ G H+ L + W
Sbjct: 766 NGYGQLGDDSTTTRYSPVQVSTLTN---WTA--VSAGENHSLALKS--------DGTVWA 812
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
FG GQLG GTT S P QVK+L +V++ G + + S G VWSWG +
Sbjct: 813 FGYNGYGQLGDGTTSSQRTPVQVKDL---TGVVAIAAGKDFSLALKSDGTVWSWG-QNTY 868
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G N + TR+ P+ ++ D +A G H V + DG +++WG
Sbjct: 869 GELGNGTTTRSSV-----PVQVA-------LLTDVKAIAAGDYHGVALKKDG-SVFAWGY 915
Query: 342 GRSGVLGTGKTIDFFAP 358
+G LG TI P
Sbjct: 916 NGNGELGNSSTISQSTP 932
>gi|255549098|ref|XP_002515604.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
gi|223545242|gb|EEF46749.1| Williams-Beuren syndrome chromosome region 16 protein, putative
[Ricinus communis]
Length = 374
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 137/323 (42%), Gaps = 56/323 (17%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P L NH + S+ GG +L + G ++ G G S +
Sbjct: 45 PKLLLSSCFANHS----LKSIACGGAHTLFLTETGCVYATGLNDFGQLGISGNLS----Y 96
Query: 117 TPSPVWDFHG--HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
T PV G +++++ G H A+ GE Y WG N+NGQLGLG +
Sbjct: 97 TTEPV-KVSGLQKEIMQISAGYHHSCAITVDGELYM--------WGRNSNGQLGLGKKAQ 147
Query: 175 RL--RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R+ P +E N + + V GS H+ +T R E++ W GLG G+LGH
Sbjct: 148 RIVPLPTKVEYLNGLT---IKLVALGSEHSIAVTDRG------EALSW--GLGGFGRLGH 196
Query: 233 G---------TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
T+ S P +K+L + V + SV GL H++ + G V+ +G
Sbjct: 197 SNQSGTFRFWTSTSEYTPRSIKKLEE-VKVKSVAAGLLHSACIDVNGSVFVFG------- 248
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
S+ R G+AI + S G K +V+CG HT +VT G +L++WG
Sbjct: 249 --EVSVDRTGFGEAIGAEIPSMVG----KLPCANEVSCGGYHTCVVTSGG-ELYAWGVNE 301
Query: 344 SGVLGTGKTIDFFAPAIVLWPPL 366
+G LG G AP V P L
Sbjct: 302 NGCLGIGSFNSLHAPERVQGPFL 324
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 105/261 (40%), Gaps = 49/261 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTV 129
+I + AG S AI G L+MWG +S+ + G + P+ V +G T+
Sbjct: 109 EIMQISAGYHHSCAITVDGELYMWGR----NSNGQLGLGKKAQRIVPLPTKVEYLNGLTI 164
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR---------PKI 180
VA GSEH +A+ GE SWG G+LG ++ R P+
Sbjct: 165 KLVALGSEHSIAVTDRGEA--------LSWGLGGFGRLGHSNQSGTFRFWTSTSEYTPRS 216
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
I+ + V V G H+A + + + FG + G G A +
Sbjct: 217 IKKLEEVK---VKSVAAGLLHSACID--------VNGSVFVFGEVSVDRTGFGEAIGAEI 265
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P V +LP V CG +HT VV+S G++++WG+ + N L +P
Sbjct: 266 PSMVGKLP---CANEVSCGGYHTCVVTSGGELYAWGVNE------NGCLGIGSFNSLHAP 316
Query: 301 ILISGNGPHGPKFQDPVQVAC 321
+ GP + PV+ C
Sbjct: 317 ERV-----QGPFLRSPVEKVC 332
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 159 WGANNNGQLGLGDRESRLRPKII--ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + G+LG G +S+ RPK++ F S + + CG HT LT E
Sbjct: 26 WGNGDFGRLGTGSLDSQWRPKLLLSSCFANHS---LKSIACGGAHTLFLT---------E 73
Query: 217 SMC-WTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ C + GL + GQLG G P +V L + + +S G H+ ++ G+++
Sbjct: 74 TGCVYATGLNDFGQLGISGNLSYTTEPVKVSGLQKEIMQISA--GYHHSCAITVDGELYM 131
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG N L + I P+ +G + VA G+ H++ VTD G
Sbjct: 132 WGRNS------NGQLGLGKKAQRIVPLPTKVEYLNGLTIK---LVALGSEHSIAVTDRGE 182
Query: 335 KLWSWGRGRSGVLG 348
L SWG G G LG
Sbjct: 183 AL-SWGLGGFGRLG 195
>gi|440800955|gb|ELR21981.1| regulator of chromosome condensation (RCC1) repeat domain
containing protein [Acanthamoeba castellanii str. Neff]
Length = 447
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 128/286 (44%), Gaps = 48/286 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + K GG++S +A + + G D T+ P PV G +VKVA
Sbjct: 122 LVATKDGGLLSFGYGSANVV-VDGRLGHGDQRTQ--------MIPRPVLSLSGVRIVKVA 172
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H + L G +S+G +G LG GD+ +L PK+I + ++ V
Sbjct: 173 AGAHHSLVLSDQGN--------VFSFGVGIDGSLGHGDQARQLVPKLISSLQREK---VV 221
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ GS H+ ++ ++FGLG G LGHG T +LVP++++ Q
Sbjct: 222 DIAAGSAHSLVVAE--------SGDVYSFGLGSEGALGHGDTDMSLVPKKIEHFVQRPA- 272
Query: 254 VSVDCGLFHTSVVS------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
V V G H+ V+S G V S+G + G +R A A + +
Sbjct: 273 VKVAAGGSHSLVLSKLYVLEQEGRVLSFG-QNSYGQLGLGHFSRMIASPAQVQVEAA--- 328
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
V++ GA H++++T+DG +++S+G + G LG G +
Sbjct: 329 --------AVEIEAGAHHSLVLTNDG-RVYSFGLAQHGQLGHGNDL 365
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE- 226
G GD +LRPK +E ++ V +V+ G +H+ + T + +FG G
Sbjct: 90 GHGDHVDKLRPKCVEALARER---VRDVSAGLYHSLVATK--------DGGLLSFGYGSA 138
Query: 227 ----NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
+G+LGHG ++ ++P V L V +V V G H+ V+S G+V+S+G+
Sbjct: 139 NVVVDGRLGHGDQRTQMIPRPVLSLSG-VRIVKVAAGAHHSLVLSDQGNVFSFGV----- 192
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
+ SL + + P LIS + + V +A G+AH+++V + G ++S+G G
Sbjct: 193 -GIDGSLGHGDQARQLVPKLIS-----SLQREKVVDIAAGSAHSLVVAESG-DVYSFGLG 245
Query: 343 RSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 372
G LG G T + L P E F Q
Sbjct: 246 SEGALGHGDT------DMSLVPKKIEHFVQ 269
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 96/245 (39%), Gaps = 43/245 (17%)
Query: 26 SLNCCMDGQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMS 84
S +G LG ++ SLVP IE F+ + +K+ AGG S
Sbjct: 241 SFGLGSEGALGHGDTDMSLVPKKIEHFV---------------QRPAVKVA---AGGSHS 282
Query: 85 LAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
L + L G ++ G G S SP V++ G+ H + L
Sbjct: 283 LVLSKLYVLEQEGRVLSFGQNSYGQLGLGHFSRMIASPAQVQVEAAAVEIEAGAHHSLVL 342
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ G YS+G +GQLG G D P +I++ ++ + +V G+
Sbjct: 343 TNDGR--------VYSFGLAQHGQLGHGNDLRDNPEPTLIQSLERER---IVDVAAGNNF 391
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
+ +L+ E ++FG G+NG+LG G +A P V V +S G
Sbjct: 392 SLVLS--------AEGTVFSFGCGKNGRLGKGDESNATQPTVVFAAGHTVSAIS--AGYS 441
Query: 262 HTSVV 266
H+ VV
Sbjct: 442 HSLVV 446
>gi|282722854|gb|ADA84473.1| retinitis pigmentosa GTPase regulator protein 2 1-17 isoform [Danio
rerio]
Length = 708
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 54/307 (17%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGH 127
P++I G + + G L+M+G S+ G L + T P+ V
Sbjct: 38 PLRIS---CGDEHTALVTENGKLFMFG------SNNWGQLGLGTKTTVNKPTCVKALRSE 88
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V ACG H + S G Y+ G NN GQLGLGD R ++E FN+
Sbjct: 89 RVKLTACGRTHTLVFTSRGN--------LYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQ 140
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P + + GS +A LT R + G GQ+G G +AL P++V +
Sbjct: 141 GPIKM--LAAGSNTSAALTQDGR--------LYMRGDNSEGQIGLGKESNALTPQEVS-V 189
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISG 305
+ V+ VS CG +H++ V+ G ++++G + LGL L ++ ++ I
Sbjct: 190 GKRVFWVS--CGYYHSAFVTVDGALYTFGEKDSGKLGLS-TEKLANHKVPQQVTDIP--- 243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
VQVACG HTV +T++ +++S+G G+ G LG G I F + P
Sbjct: 244 --------DRVVQVACGGGHTVALTEN--EVYSFGLGQFGQLGHGTFI--FESRL---PR 288
Query: 366 LTEEFKQ 372
+ E F++
Sbjct: 289 VVEHFRK 295
>gi|139948634|ref|NP_001077132.1| probable E3 ubiquitin-protein ligase HERC3 [Bos taurus]
gi|124829040|gb|AAI33342.1| HERC3 protein [Bos taurus]
gi|296486686|tpg|DAA28799.1| TPA: hect domain and RLD 3 [Bos taurus]
Length = 1050
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 138/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV----SSFTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+ S P + + T+
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWG------AGSDGQLGLMTIEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGRNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVVAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/279 (26%), Positives = 118/279 (42%), Gaps = 68/279 (24%)
Query: 128 TVVKVACGSEHVVALVSAGETY------KGE----------------------DLVC--- 156
+V +VACG H V L+ GE Y KG+ + C
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVYTCGVNTKGQLGHEREGNKPEQIGALADQHIVHVACGES 94
Query: 157 -----------YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTAL 204
+SWGA ++GQLGL E + P++I+ NQ + + +V+CG++H
Sbjct: 95 HSLALSDQGQLFSWGAGSDGQLGLMTIEDSVAVPRLIQKLNQQT---ILQVSCGNWHCLA 151
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQYVYLVSVDCGLFHT 263
L + +T+G +GQLG G S P++V+ L + + L V G H+
Sbjct: 152 LA--------ADGQFFTWGRNSHGQLGLGKEFPSQASPQRVRSL-EGIPLAQVVAGGAHS 202
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+S +G V+ WGM L ++ D SP + + Q V ++CG
Sbjct: 203 FALSLSGAVFGWGMNNA------GQLGLSDEKDRESPCHVK-----LLRTQKVVYISCGE 251
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
HT ++T G ++++G G G LG D P VL
Sbjct: 252 EHTAVLTKSG-GVFTFGAGSCGQLGHDSMNDEVNPRRVL 289
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVVAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|350587982|ref|XP_003129374.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Sus scrofa]
Length = 1050
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEESVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RAQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 109/242 (45%), Gaps = 46/242 (19%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+V +VACG +H V L+ GE Y + G N GQLG +RE +P+ I
Sbjct: 34 RSVKEVACGGDHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGN-KPEQIGALAD 83
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVK 245
+ + V CG H+ L+ R + +++G G +GQLG TT +S VP ++
Sbjct: 84 EH---IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEESVAVPRLIQ 132
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAIS 299
+L Q L V CG +H +++ G ++WG + GLG AS R + + I
Sbjct: 133 KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI- 190
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 191 PL---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPC 234
Query: 360 IV 361
V
Sbjct: 235 HV 236
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEEDRESPCHVKLLRAQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|395521023|ref|XP_003764621.1| PREDICTED: RCC1 and BTB domain-containing protein 2 [Sarcophilus
harrisii]
Length = 552
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/284 (27%), Positives = 122/284 (42%), Gaps = 35/284 (12%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS-E 137
AG + + +N + NC S G ++ S P V G + ++ GS
Sbjct: 55 AGNEVLYSTENDEVFVLGTNC----SGCLGTGDILHSIEPRRVDHLCGKKIACLSYGSGP 110
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
HVV GE Y +WG N QLG G L P I T + V EV C
Sbjct: 111 HVVIATDEGEVY--------TWGHNAYNQLGNGTTNHGLVPTHISTNLGNRK--VIEVAC 160
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS H+ +LT + + +G +GQ+G G+T + +P +V Q ++
Sbjct: 161 GSHHSLVLTS--------DGEVFAWGYNNSGQVGSGSTANQPIPRKVTGCLQNKIATTIA 212
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG + V +G+V+ WG N L +G+ +P I+ G +
Sbjct: 213 CGQMCSMAVVESGEVYVWGYNG------NGQLGLGSSGNQPTPCRIA--ALQGIRVH--- 261
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ CG AHT+++TD+G+ L++WG G LGTG + P V
Sbjct: 262 KIVCGYAHTLVLTDEGH-LYAWGANSYGQLGTGNKSNQSYPTPV 304
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 174/443 (39%), Gaps = 76/443 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I S +G + +A D G ++ WG+ L + +T G LV + + +
Sbjct: 101 IACLSYGSGPHVVIATDE-GEVYTWGHNAYNQLGNGTTNHG--LVPTHIST---NLGNRK 154
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 155 VIEVACGSHHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRKVTGCLQNK 206
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ CG + + + +G NGQLG G++ + P ++ L
Sbjct: 207 --IATTIACGQMCSMAVVESGE--------VYVWGYNGNGQLGLGSSGNQPTPCRIAAL- 255
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + + CG HT V++ G +++WG N G L +GN
Sbjct: 256 QGIRVHKIVCGYAHTLVLTDEGHLYAWGA--------------NSYGQ-----LGTGNKS 296
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC +AHT ++ WG RG+S L T
Sbjct: 297 N-QSYPTPVSVEKDRVIEIAACHSAHTSAAKTQSGHIYMWGQCRGQSVTLPHLTHFSCTD 355
Query: 351 KTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQ 410
FA V W L+ E D L + K+ + E D K + + + +
Sbjct: 356 DVFACFATPAVSWRLLSVE-PDDHLTVA----QSLKKEFDNPETADLKFLVDGKYIYVHK 410
Query: 411 SKLSVM-ERYASILHGSIFGKPFAAEQDIPISLKDMGFFDITKEWENMLESADRSKLVRL 469
L + E + S+L+G+ E P+ F + L D L+ L
Sbjct: 411 VLLKIRCEHFRSVLNGNEDDIVEMDEFSYPVY---RAFLEYLYTDCINLSPEDAIGLLDL 467
Query: 470 ERFYR-NMLAGVKDKLMKRRIQE 491
FYR N L + + +K+ I E
Sbjct: 468 ATFYRDNRLKKLCQQTIKQGICE 490
>gi|332218227|ref|XP_003258260.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Nomascus leucogenys]
Length = 1057
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL---V 188
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 189 GIPFMQVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|395741726|ref|XP_003777632.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Pongo
abelii]
Length = 1049
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYCHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYCHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYCHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|340502171|gb|EGR28884.1| hypothetical protein IMG5_167380 [Ichthyophthirius multifiliis]
Length = 267
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 101/197 (51%), Gaps = 29/197 (14%)
Query: 156 CYSWGANNNGQLGL-GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+SWG+ G+LG D + + PKIIETF+ + V ++ G+ H+A T++ +
Sbjct: 79 VFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNI-IVTKIALGTHHSAACTNQGK---- 133
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+T+G G NGQLGHG+ Q+ +P++VKE Q + ++ + CG HT + S V+
Sbjct: 134 ----LYTWGQGVNGQLGHGSNQNEEIPKKVKEF-QDIRVLEIACGDSHTMAIISGNLVYG 188
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTD 331
WG N+AG L N P F ++ VQ+ CG H++ +T
Sbjct: 189 WGF--------------NQAGQLGFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTV 234
Query: 332 DGYKLWSWGRGRSGVLG 348
+G +++SWG G LG
Sbjct: 235 EG-QVYSWGSNEYGQLG 250
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 87/204 (42%), Gaps = 20/204 (9%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ + A S++ID G ++ WG+ E + V K+
Sbjct: 59 KLEKIYAQSNYSMSIDTKGNVFSWGSGEFGRLGYEKDVKYQKYPKIIETFSIQNIIVTKI 118
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G+ H A + G+ Y+WG NGQLG G ++ PK ++ F QD V
Sbjct: 119 ALGTHHSAACTNQGK--------LYTWGQGVNGQLGHGSNQNEEIPKKVKEF-QDI--RV 167
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
E+ CG HT + + ++ + +G + GQLG +P+++ Q
Sbjct: 168 LEIACGDSHTMAI--------ISGNLVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQKE- 218
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG 276
+V + CG H+ ++ G V+SWG
Sbjct: 219 VVQIQCGKKHSIALTVEGQVYSWG 242
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 70/163 (42%), Gaps = 28/163 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I + + G S A N G L+ WG N L S + + P V +F
Sbjct: 113 IIVTKIALGTHHSAACTNQGKLYTWGQGVNGQLGHGSNQ------NEEIPKKVKEFQDIR 166
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+++ACG H +A++S + Y WG N GQLG D PK I FNQ
Sbjct: 167 VLEIACGDSHTMAIISGN--------LVYGWGFNQAGQLGFQDLSRVNLPKKIMFFNQKE 218
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
V ++ CG H+ LT +E +++G E GQLG
Sbjct: 219 ---VVQIQCGKKHSIALT--------VEGQVYSWGSNEYGQLG 250
Score = 47.4 bits (111), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 36/141 (25%), Positives = 63/141 (44%), Gaps = 32/141 (22%)
Query: 31 MDGQLGF-SGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
++GQLG S N +P +++F I++ + G ++AI +
Sbjct: 141 VNGQLGHGSNQNEEIPKKVKEF------------------QDIRVLEIACGDSHTMAIIS 182
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
++ WG + + + GF +S P + F+ VV++ CG +H +AL G+
Sbjct: 183 GNLVYGWG----FNQAGQLGFQDLSRVNLPKKIMFFNQKEVVQIQCGKKHSIALTVEGQV 238
Query: 149 YKGEDLVCYSWGANNNGQLGL 169
YSWG+N GQLG+
Sbjct: 239 --------YSWGSNEYGQLGI 251
>gi|332218225|ref|XP_003258259.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Nomascus leucogenys]
Length = 1049
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL---V 188
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 189 GIPFMQVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|50511409|gb|AAT77332.1| unknown prtein [Oryza sativa Japonica Group]
Length = 901
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 36/313 (11%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT 128
A + I V G + A+ +G L+ WGN +S G + VS + P V G
Sbjct: 360 ANMNIELVACGEYHTCAVTLSGDLYTWGN-GTSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + SAG+ + ++G + G LG GDR+S P+ +E+
Sbjct: 419 VSAISCGPWHTAIVTSAGQLF--------TFGDGSFGVLGHGDRQSLSVPREVESLKG-- 468
Query: 189 PWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V
Sbjct: 469 -LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCV 527
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
L + + + CG T ++++G V++ G P N D + P+ +
Sbjct: 528 AALVEPNF-CQIACGHCMTVALTTSGHVYTMG-------SPVYGQLGNPQADGMLPVRVE 579
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G F + +++CGA H ++T ++++WG+G +G LG G T D +P +V
Sbjct: 580 GK--LHKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRSSPTLV--- 631
Query: 365 PLTEEFKQDELNT 377
E K ++ T
Sbjct: 632 ---EALKDKQVRT 641
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 102/244 (41%), Gaps = 39/244 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + GE Y SWG + G+LG G +PK+I+
Sbjct: 312 VQNISCGGRHATLVTKQGEIY--------SWGEESGGRLGHGVDCDVPQPKLIDALAN-- 361
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG +HT +T D+ W G +G LGHG S VP++V
Sbjct: 362 -MNIELVACGEYHTCAVT---LSGDLYT---WGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +++ ++ CG +HT++V+SAG ++++G + G+ + + +
Sbjct: 415 EGIHVSAISCGPWHTAIVTSAGQLFTFG-DGSFGVLGHGDRQSLSVPREVESL------- 466
Query: 309 HGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDFFA 357
K V+ ACG HT V + K+++WG G G LG G
Sbjct: 467 ---KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLV 523
Query: 358 PAIV 361
P V
Sbjct: 524 PTCV 527
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 97/257 (37%), Gaps = 83/257 (32%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + ++ G + + +AG L+ +G +G F ++ S P V
Sbjct: 417 IHVSAISCGPWHTAIVTSAGQLFTFG---------DGSFGVLGHGDRQSLSVPREVESLK 467
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG GD+++RL P
Sbjct: 468 GLRTVRAACGVWHTAAVV---EVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP 524
Query: 179 KIIETFNQDS---------------------------------PWA-------------- 191
+ + + P A
Sbjct: 525 TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHK 584
Query: 192 --VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V E++CG++H A+LT R + +T+G G NG+LGHG T P V+ L
Sbjct: 585 NFVEEISCGAYHVAVLTSR--------TEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD 636
Query: 250 YVYLVSVDCGLFHTSVV 266
+ +V CG+ T+ +
Sbjct: 637 K-QVRTVVCGINFTAAI 652
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
C + G M++A+ +G ++ G+ P+ + G P V H + V ++
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGS-PV---YGQLGNPQADGMLPVRVEGKLHKNFVEEI 590
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ HV L S E Y +WG NG+LG GD + R P ++E V
Sbjct: 591 SCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRSSPTLVEALKDKQ---V 639
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMC 219
V CG TA + K + + +SMC
Sbjct: 640 RTVVCGINFTAAICIHKWVSGVDQSMC 666
>gi|297686826|ref|XP_002820939.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 1
[Pongo abelii]
Length = 1057
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYCHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYCHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYCHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|145593730|ref|YP_001158027.1| cell wall anchor domain-containing protein [Salinispora tropica
CNB-440]
gi|145303067|gb|ABP53649.1| LPXTG-motif cell wall anchor domain [Salinispora tropica CNB-440]
Length = 558
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/294 (30%), Positives = 130/294 (44%), Gaps = 34/294 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+I +V G SLA+ + G+L WG+ D+ G S+ SS TP V TV
Sbjct: 139 IRIVAVAVGADHSLALTSTGSLLAWGSN---DTGQLGDGSVTSSSTPVAVRLPPNTTVAA 195
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G +H + L + G +WGAN GQLG G R RP + N +
Sbjct: 196 IAAGRDHNLVLTATGPA------ALLAWGANREGQLGDGTVVDRSRPVPV---NLPTGLT 246
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + G H+ LT +D + + W G +GQLG GTT +L+P V LP
Sbjct: 247 VTAIAGGRDHSLALTS----DDTV--LAW--GGNSHGQLGDGTTTGSLLPVTVV-LPVGA 297
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
++ G H+ ++S G +WG G N S + D+ P+ +S P G
Sbjct: 298 EATAIAAGRLHSLALTSDGTALAWGGNH-WGQLGNGSTS-----DSSEPVAVS--LPGGT 349
Query: 312 KFQDPVQVAC-GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+ + +A + H V +T +G L +WG G LG G T D P V P
Sbjct: 350 RL---ISIASRDSDHNVAITTEGAAL-AWGLNSQGHLGDGTTTDSATPVAVSLP 399
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 86/316 (27%), Positives = 128/316 (40%), Gaps = 47/316 (14%)
Query: 60 LEDDSKTNHKAPIKI--------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF- 110
L D + T+ PI + +V AG S+A+ +AG + WG +TEG
Sbjct: 67 LGDGTTTDSSEPIAVRLPTGTTVAAVAAGDRHSVALTSAGTVLAWGR------NTEGQLG 120
Query: 111 --SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ SS P V G +V VA G++H +AL S G +WG+N+ GQLG
Sbjct: 121 NGTTTSSGEPVAVSLPSGIRIVAVAVGADHSLALTSTGS--------LLAWGSNDTGQLG 172
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G S P + + V + G H +LT P +L +G G
Sbjct: 173 DGSVTSSSTPVAVRLPPNTT---VAAIAAGRDHNLVLT-ATGPAALLA-----WGANREG 223
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG GT P V LP + + ++ G H+ ++S V +WG +
Sbjct: 224 QLGDGTVVDRSRPVPVN-LPTGLTVTAIAGGRDHSLALTSDDTVLAWGGNS------HGQ 276
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
L ++ P+ + P + +A G H++ +T DG L +WG G LG
Sbjct: 277 LGDGTTTGSLLPVTVV-----LPVGAEATAIAAGRLHSLALTSDGTAL-AWGGNHWGQLG 330
Query: 349 TGKTIDFFAPAIVLWP 364
G T D P V P
Sbjct: 331 NGSTSDSSEPVAVSLP 346
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 74/163 (45%), Gaps = 17/163 (10%)
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
H+ ++ +G + GQLG GTT + P V+ LP + +V G H+ +
Sbjct: 44 HQPASAAVMSDAILAWGGNDGGQLGDGTTTDSSEPIAVR-LPTGTTVAAVAAGDRHSVAL 102
Query: 267 SSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+SAG V +WG E LG + T +G+ ++ L P G + V VA GA
Sbjct: 103 TSAGTVLAWGRNTEGQLG-----NGTTTSSGEPVAVSL-----PSGIRI---VAVAVGAD 149
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
H++ +T G L +WG +G LG G P V PP T
Sbjct: 150 HSLALTSTG-SLLAWGSNDTGQLGDGSVTSSSTPVAVRLPPNT 191
>gi|255585556|ref|XP_002533468.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223526683|gb|EEF28920.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1097
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/296 (28%), Positives = 133/296 (44%), Gaps = 44/296 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ +G L+ WG+ ++ G + VS + P V G V +ACG
Sbjct: 322 VACGEYHTCAVTTSGDLYTWGDGTR-NAGLLGQGTDVSHWIPKRVSGPLEGLQVFSIACG 380
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H S G+ +++G G LG GDRES PK ++ S +V
Sbjct: 381 TWHSALATSNGK--------LFTFGDGAFGVLGHGDRESLSFPKEVQLL---SGLKTIKV 429
Query: 196 TCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +HTA + + ++ +T+G G+ +LGHG+ + L+P V L Y +
Sbjct: 430 ACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCVSSLIDYNFH 489
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ CG T ++++G V++ G LG N A D P L+
Sbjct: 490 -QIACGQTLTVALTTSGHVFTMGGTAHGQLG---------NPASDGKMPTLV-------- 531
Query: 312 KFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +V+CGA H ++T +L++WG+G +G LG G T D P +V
Sbjct: 532 --QDSLVGEFVEEVSCGAHHVAVLTSRS-ELYTWGKGANGRLGHGDTEDRRTPTLV 584
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 122/295 (41%), Gaps = 41/295 (13%)
Query: 80 GGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
GG I++ G +++WG + PD S TP P+ V ++ACG
Sbjct: 214 GGSGPDDIESLGDVYLWGEVWSDAVFPDGSMSSVPIKNDVLTPKPLESNVVLDVQQIACG 273
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
HV + GE ++WG + G+LG G P+++E + V V
Sbjct: 274 VRHVALVTRQGE--------VFTWGEESGGRLGHGFETDFSCPRLVEFLAVTN---VDFV 322
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CG +HT +T D+ W G G LG GT S +P++V + + + S
Sbjct: 323 ACGEYHTCAVT---TSGDL---YTWGDGTRNAGLLGQGTDVSHWIPKRVSGPLEGLQVFS 376
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
+ CG +H+++ +S G ++++G + G+ + R L+SG
Sbjct: 377 IACGTWHSALATSNGKLFTFG-DGAFGVLGHGD--RESLSFPKEVQLLSG--------LK 425
Query: 316 PVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++VACG HT + + KL++WG G LG G + P V
Sbjct: 426 TIKVACGVWHTAAIVEVMSQSGANVSSRKLFTWGDGDKNRLGHGSKDTYLLPTCV 480
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 82/176 (46%), Gaps = 28/176 (15%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D + G S + P+ V + ++ACG VAL ++G
Sbjct: 455 LFTWGDG---DKNRLGHGSKDTYLLPTCVSSLIDYNFHQIACGQTLTVALTTSGH----- 506
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA--VYEVTCGSFHTALLTHRKR 210
++ G +GQLG + ++ T QDS V EV+CG+ H A+LT R
Sbjct: 507 ---VFTMGGTAHGQLGNPASDGKM-----PTLVQDSLVGEFVEEVSCGAHHVAVLTSR-- 556
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL-FHTSV 265
S +T+G G NG+LGHG T+ P V+ L ++ ++ CG F TS+
Sbjct: 557 ------SELYTWGKGANGRLGHGDTEDRRTPTLVEALKDR-HVKNISCGSNFTTSI 605
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 64/137 (46%), Gaps = 23/137 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKV 132
+ G +++A+ +G ++ G L + +++G P+ V D G V +V
Sbjct: 491 IACGQTLTVALTTSGHVFTMGGTAHGQLGNPASDGKM-------PTLVQDSLVGEFVEEV 543
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ HV L S E Y+WG NG+LG GD E R P ++E V
Sbjct: 544 SCGAHHVAVLTSRSE--------LYTWGKGANGRLGHGDTEDRRTPTLVEALKDRH---V 592
Query: 193 YEVTCGS-FHTALLTHR 208
++CGS F T++ H+
Sbjct: 593 KNISCGSNFTTSICIHK 609
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
+ CG+ H ++V+ G+V++WG E G L D P L+ F
Sbjct: 270 IACGVRHVALVTRQGEVFTWGEESG------GRLGHGFETDFSCPRLVEFLAVTNVDF-- 321
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
VACG HT VT G L++WG G +G+LG G + + P V P
Sbjct: 322 ---VACGEYHTCAVTTSG-DLYTWGDGTRNAGLLGQGTDVSHWIPKRVSGP 368
>gi|313236983|emb|CBY12230.1| unnamed protein product [Oikopleura dioica]
Length = 1048
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/280 (29%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP-VWDFHGH-TVV 130
+I V AG S+AI +G L+ WG S G P + D H +VV
Sbjct: 82 EIFHVAAGDFFSIAIAESGLLFGWGR------SLNGELMCKQDSLHEPKLLDKIMHWSVV 135
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDSP 189
+VACG++H +AL G SWG+N GQLGLG E L P II + N
Sbjct: 136 QVACGAQHCIALTEEG--------TILSWGSNTQGQLGLGSSEIEFLEPTIIASLN---A 184
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ + ++ G++H+ +L+ P+ L +T+G GQLGHG + S ++ + +
Sbjct: 185 FPISQICAGAYHSGVLS----PSGTL----FTWGKNNWGQLGHGNSDSFQSSPRLVKTLR 236
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V V G H+ + G V+SWG N L N + P I
Sbjct: 237 HQEVVFVAMGEEHSVCRTRNGGVFSWGHGG------NGQLGHNSMANVTQPKKIM----- 285
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
Q+ CG HT+ +TD KL +G + LGT
Sbjct: 286 ELMGTTVCQICCGRRHTISLTDK-RKLLGFGLNSNNQLGT 324
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 107/247 (43%), Gaps = 35/247 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
PS V F + VA G +A+ +G + + WG + NG+L + ++S
Sbjct: 72 PSLVTGFGAEEIFHVAAGDFFSIAIAESG--------LLFGWGRSLNGEL-MCKQDSLHE 122
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
PK+++ W+V +V CG+ H LT E ++G GQLG G+++
Sbjct: 123 PKLLDKIMH---WSVVQVACGAQHCIALTE--------EGTILSWGSNTQGQLGLGSSEI 171
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAG 295
+ + + + G +H+ V+S +G +++WG LG + S
Sbjct: 172 EFLEPTIIASLNAFPISQICAGAYHSGVLSPSGTLFTWGKNNWGQLGHGNSDSFQS---- 227
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
SP L+ + Q+ V VA G H+V T +G ++SWG G +G LG +
Sbjct: 228 ---SPRLVKT-----LRHQEVVFVAMGEEHSVCRTRNG-GVFSWGHGGNGQLGHNSMANV 278
Query: 356 FAPAIVL 362
P ++
Sbjct: 279 TQPKKIM 285
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 89/214 (41%), Gaps = 45/214 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLGLG + P I D+ +V + G HT LT ++
Sbjct: 2 YGWGKNDYGQLGLGSENMLISCPSPI-----DANQSVISIASGLRHTVYLTSTRK----- 51
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
++ G E GQLG +Q P V + V G F + ++ +G ++ W
Sbjct: 52 ---VYSCGSNEFGQLGQQKSQCR--PSLVTGFGAE-EIFHVAAGDFFSIAIAESGLLFGW 105
Query: 276 GME-KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP------VQVACGAAHTVL 328
G G +C SL H PK D VQVACGA H +
Sbjct: 106 GRSLNGELMCKQDSL-------------------HEPKLLDKIMHWSVVQVACGAQHCIA 146
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIV 361
+T++G + SWG G LG G + I+F P I+
Sbjct: 147 LTEEG-TILSWGSNTQGQLGLGSSEIEFLEPTII 179
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 69/171 (40%), Gaps = 27/171 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
I + AG S + +G L+ WG ++ + G SF SP V VV
Sbjct: 187 ISQICAGAYHSGVLSPSGTLFTWGK----NNWGQLGHGNSDSFQSSPRLVKTLRHQEVVF 242
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
VA G EH V G + SWG NGQLG + +PK I+E
Sbjct: 243 VAMGEEHSVCRTRNGGVF--------SWGHGGNGQLGHNSMANVTQPKKIMELMGT---- 290
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
V ++ CG HT LT +++ FGL N QLG SA +P
Sbjct: 291 TVCQICCGRRHTISLTDKRK--------LLGFGLNSNNQLGTHNDTSARLP 333
>gi|301755552|ref|XP_002913643.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Ailuropoda melanoleuca]
Length = 1129
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 165 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 218
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ ++WG N++GQLGLG S+ P+ + + +
Sbjct: 219 LQVSCGNWHCLALAADGQ--------FFTWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 269
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 270 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LL 318
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 319 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 372
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 373 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 420
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 107/242 (44%), Gaps = 46/242 (19%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 113 RSVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQ 163
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVK 245
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP ++
Sbjct: 164 H----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQ 211
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAIS 299
+L Q L V CG +H +++ G ++WG + GLG AS R + + I
Sbjct: 212 KLNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI- 269
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 270 PL---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPC 313
Query: 360 IV 361
V
Sbjct: 314 HV 315
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 269 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEEDRESPCHVKLLRTQKVVY 325
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 326 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 374
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 375 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 421
>gi|302753472|ref|XP_002960160.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
gi|300171099|gb|EFJ37699.1| hypothetical protein SELMODRAFT_73640 [Selaginella moellendorffii]
Length = 435
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 74/270 (27%), Positives = 115/270 (42%), Gaps = 46/270 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP--------LPDSSTEGGFSLVSSFTPSPVWDF 124
+I V AGG + A+ +G L+ WG PD EG S + V
Sbjct: 188 RIVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQALDV--- 244
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
+ V CG +AL +G+ +SWG N N +LG G R + +PK++
Sbjct: 245 ---PIALVYCGGFFTMALTKSGQ--------LWSWGGNANHELGHGTRANNWKPKVVAAL 293
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +V CG FH A LT + T+G G NGQLGHGT ++ P V
Sbjct: 294 EDVT---LVQVACGGFHAAALTQ--------DGKVITWGYGGNGQLGHGTLENGKEPAIV 342
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL-CPNASLTRNEAGDAISPILI 303
+ + + CG T+ ++ GD+++WG + L P + + P+L+
Sbjct: 343 EAMADKT-CTYIACGPAWTAAITENGDLYTWGKNRDYQLGIPGLK------DEQLDPVLV 395
Query: 304 SGNGPHGPKFQDPVQ---VACGAAHTVLVT 330
P + PV+ V+CGA H V +
Sbjct: 396 --QFPQALHEKTPVEVLGVSCGANHGVCIV 423
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 128/307 (41%), Gaps = 49/307 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
++ AGG+ ++A+ G ++ WG L S E L+ P D +
Sbjct: 136 RVQMASAGGLHNIALTEVGNVYTWGYGAFGALGHGSYE--RELLPRLLEGPWKD----RI 189
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGAN-NNGQLGLG-----DRESRLRPKIIET 183
V V+ G H A+ +GE Y+WG + G+LG G D + RP ++
Sbjct: 190 VHVSAGGSHTAAVTESGE--------LYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQA 241
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
D P A+ V CG F T LT W++G N +LGHGT + P+
Sbjct: 242 L--DVPIAL--VYCGGFFTMALTK--------SGQLWSWGGNANHELGHGTRANNWKPKV 289
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V L + V LV V CG FH + ++ G V +WG N L + P ++
Sbjct: 290 VAAL-EDVTLVQVACGGFHAAALTQDGKVITWGYGG------NGQLGHGTLENGKEPAIV 342
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT-GKTIDFFAPAIVL 362
+ +ACG A T +T++G L++WG+ R LG G + P +V
Sbjct: 343 EAMADKTCTY-----IACGPAWTAAITENG-DLYTWGKNRDYQLGIPGLKDEQLDPVLVQ 396
Query: 363 WPPLTEE 369
+P E
Sbjct: 397 FPQALHE 403
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 110/260 (42%), Gaps = 35/260 (13%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V V CG H V +D+ + WG + G+LG+ ++ +P + +
Sbjct: 89 VGVTCGLFHSVLFAE-------QDV--FVWGKGDGGRLGIDTEFNQYKPYVNPRIKR--- 136
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + G H LT +T+G G G LGHG+ + L+P ++ E P
Sbjct: 137 --VQMASAGGLHNIALTEVGN--------VYTWGYGAFGALGHGSYERELLP-RLLEGPW 185
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+V V G HT+ V+ +G++++WG ++G G + + + G P +
Sbjct: 186 KDRIVHVSAGGSHTAAVTESGELYTWGRDEGEGRLGHGNPDIMDEGALSRPTKVQ----- 240
Query: 310 GPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
P+ V CG T+ +T G +LWSWG + LG G + + P +V E
Sbjct: 241 --ALDVPIALVYCGGFFTMALTKSG-QLWSWGGNANHELGHGTRANNWKPKVV---AALE 294
Query: 369 EFKQDELNTGGLDDEIKTKD 388
+ ++ GG T+D
Sbjct: 295 DVTLVQVACGGFHAAALTQD 314
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 34/231 (14%)
Query: 49 EQFLTIGAPDSLEDDSKTN----HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDS 104
E L G PD +++ + + + I V GG ++A+ +G LW WG ++
Sbjct: 217 EGRLGHGNPDIMDEGALSRPTKVQALDVPIALVYCGGFFTMALTKSGQLWSWGG----NA 272
Query: 105 STEGGF-SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANN 163
+ E G + +++ P V T+V+VACG H AL G+ +WG
Sbjct: 273 NHELGHGTRANNWKPKVVAALEDVTLVQVACGGFHAAALTQDGK--------VITWGYGG 324
Query: 164 NGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
NGQLG G E+ P I+E + + CG TA +T D+ +T+G
Sbjct: 325 NGQLGHGTLENGKEPAIVEAMADKT---CTYIACGPAWTAAITEN---GDL-----YTWG 373
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVY------LVSVDCGLFHTSVVSS 268
+ QLG + + + + PQ ++ ++ V CG H + S
Sbjct: 374 KNRDYQLGIPGLKDEQLDPVLVQFPQALHEKTPVEVLGVSCGANHGVCIVS 424
Score = 46.2 bits (108), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 69/177 (38%), Gaps = 32/177 (18%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL----------- 253
L R + E W +G G +GQ+GHG+ + +P + L +
Sbjct: 23 LADRVSSGEPAELEVWAWGRGTHGQVGHGSEDTEKLPVLISTLKLAAFTGMAPIQGRMPA 82
Query: 254 ------VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
V V CGLFH SV+ + DV+ WG G L + + P +
Sbjct: 83 KPRLGNVGVTCGLFH-SVLFAEQDVFVWGKGDGGRLGIDTEFNQ------YKPYV----- 130
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
P+ + + G H + +T+ G +++WG G G LG G P ++ P
Sbjct: 131 --NPRIKRVQMASAGGLHNIALTEVG-NVYTWGYGAFGALGHGSYERELLPRLLEGP 184
>gi|114321835|ref|YP_743518.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
gi|114228229|gb|ABI58028.1| regulator of chromosome condensation, RCC1 [Alkalilimnicola
ehrlichii MLHE-1]
Length = 818
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 123/297 (41%), Gaps = 49/297 (16%)
Query: 70 APIKICS---VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFTPSPVWDFH 125
AP+ I S + AG ++A++ G L WG+ G L V + +P
Sbjct: 414 APVPIASGIALVAGRNHTVAVNPDGTLRAWGDNEY------GQLGLGVMRYIVTPSQTVT 467
Query: 126 GHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G V GS H + L +D ++WG NN GQLGLGD + R P+ + +
Sbjct: 468 GSAWAAVNGGSFNHSLGLR--------DDGTLWAWGRNNYGQLGLGDTDDRATPEQVGSH 519
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ WA V S+HT + + + W +G +GQLG T PE+V
Sbjct: 520 ---TDWAA--VNAASYHTLAVKN--------DGTLWAWGRNSSGQLGLSDTNDRHTPERV 566
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ +V G HTS V G +W+WG L + D +SP +
Sbjct: 567 GSDTDW---ATVSVGQSHTSAVKPDGTLWAWGWNH------YGQLGLGDTSDRLSPEQVG 617
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + + V+ G HTV V DG LW+WG G LG G T D AP V
Sbjct: 618 GE-------SNWLAVSTGLHHTVAVKTDG-TLWAWGWNVRGQLGLGHTSDRHAPVQV 666
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/290 (28%), Positives = 119/290 (41%), Gaps = 49/290 (16%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
+V A +LA+ N G LW WG +SS + G S + HT +V
Sbjct: 523 AAVNAASYHTLAVKNDGTLWAWGR----NSSGQLGLSDTNDR----------HTPERV-- 566
Query: 135 GSEHVVALVSAGETYKGE---DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
GS+ A VS G+++ D ++WG N+ GQLGLGD RL P E +S W
Sbjct: 567 GSDTDWATVSVGQSHTSAVKPDGTLWAWGWNHYGQLGLGDTSDRLSP---EQVGGESNW- 622
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V+ G HT + + W +G GQLG G T P QV +
Sbjct: 623 -LAVSTGLHHTVAV--------KTDGTLWAWGWNVRGQLGLGHTSDRHAPVQVGSDTDWA 673
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V + T V + G +W+WG N L + + +P + +
Sbjct: 674 ---AVSASGYRTLAVKADGTLWAWGENN------NGQLGLGDTDNRNTPAQVGND----- 719
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D V+ G HT+ +D LW+WGR G LG G T + AP V
Sbjct: 720 --ADWAAVSTGLFHTLAFKED-DTLWAWGRNHDGQLGLGDTDNRDAPVQV 766
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 110/284 (38%), Gaps = 44/284 (15%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
+V AG ++A+ G LW WG G W + ++
Sbjct: 176 TAVSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGVDNDW-------IALSA 228
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H VA+ + G ++WG NN GQLGLGD P + T D+ WA +
Sbjct: 229 GGSHTVAVKADG--------TLWAWGRNNAGQLGLGDTNHHYTPTQVGT---DTDWA-KK 276
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
++ G H+ + + W +G E GQLG G T PEQV +
Sbjct: 277 ISAGRRHSLAV--------KADGSLWAWGDNEYGQLGLGDTDERHAPEQVGSNTDW---A 325
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
++ G H+ V + G +WSWG + L + D +P + +
Sbjct: 326 AISAGRRHSLAVKADGSLWSWGYND------SGQLGLGDTADRNAPEQVGAD-------T 372
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
D V+ G H++ V DG L WG G LG G T+ AP
Sbjct: 373 DWDLVSAGGEHSLAVKADG-TLMVWGLNHLGQLGLGDTVSRDAP 415
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 102/270 (37%), Gaps = 69/270 (25%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G +H VA+ + G ++WG N G+LGLGD + R P+ + T DS W
Sbjct: 128 LAAGDDHTVAVKADG--------TLWAWGRNGYGRLGLGDTDDRDVPEQVGT---DSDWT 176
Query: 192 VYEVTCGSFHTALLT--------------------HRKRP------NDML---------- 215
V+ G HT + R P ND +
Sbjct: 177 A--VSAGRDHTVAVKANGTLWAWGRSGRIGLGDSGDRDEPEQVGVDNDWIALSAGGSHTV 234
Query: 216 ----ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ W +G GQLG G T P QV + +S G H+ V + G
Sbjct: 235 AVKADGTLWAWGRNNAGQLGLGDTNHHYTPTQVGTDTDWAKKIS--AGRRHSLAVKADGS 292
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+W+WG + L + + +P + N D ++ G H++ V
Sbjct: 293 LWAWGDNE------YGQLGLGDTDERHAPEQVGSN-------TDWAAISAGRRHSLAVKA 339
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG LWSWG SG LG G T D AP V
Sbjct: 340 DG-SLWSWGYNDSGQLGLGDTADRNAPEQV 368
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 91/210 (43%), Gaps = 43/210 (20%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK---V 132
+V G ++A+ G LW WG + G L GHT + V
Sbjct: 624 AVSTGLHHTVAVKTDGTLWAWG------WNVRGQLGL-------------GHTSDRHAPV 664
Query: 133 ACGSEHVVALVSAGETYK----GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
GS+ A VSA Y+ D ++WG NNNGQLGLGD ++R P + D+
Sbjct: 665 QVGSDTDWAAVSA-SGYRTLAVKADGTLWAWGENNNGQLGLGDTDNRNTPAQV---GNDA 720
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
WA V+ G FHT + +D L W +G +GQLG G T + P QV
Sbjct: 721 DWAA--VSTGLFHTLAF----KEDDTL----WAWGRNHDGQLGLGDTDNRDAPVQVGNET 770
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ +V G +HT S G + +WG+
Sbjct: 771 DW---STVSGGGYHTLATMSDGTLRAWGLN 797
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/316 (27%), Positives = 131/316 (41%), Gaps = 80/316 (25%)
Query: 67 NHKAPIKICS-------VKAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVS 114
+H P ++ + + AG SLA+ G+LW WG+ L D+ V
Sbjct: 260 HHYTPTQVGTDTDWAKKISAGRRHSLAVKADGSLWAWGDNEYGQLGLGDTDERHAPEQVG 319
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
S T D+ ++ G H +A+ + G +SWG N++GQLGLGD
Sbjct: 320 SNT-----DW-----AAISAGRRHSLAVKADGS--------LWSWGYNDSGQLGLGDTAD 361
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R P E D+ W + V+ G H+ + + + L M W GL GQLG G
Sbjct: 362 RNAP---EQVGADTDWDL--VSAGGEHSLAV----KADGTL--MVW--GLNHLGQLGLGD 408
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG-----LCP 285
T S P + +++ G HT V+ G + +WG + GLG + P
Sbjct: 409 TVSRDAPVPIAS------GIALVAGRNHTVAVNPDGTLRAWGDNEYGQLGLGVMRYIVTP 462
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
+ ++T G A + + +G F H++ + DDG LW+WGR G
Sbjct: 463 SQTVT----GSAWAAV-------NGGSFN----------HSLGLRDDG-TLWAWGRNNYG 500
Query: 346 VLGTGKTIDFFAPAIV 361
LG G T D P V
Sbjct: 501 QLGLGDTDDRATPEQV 516
>gi|297686828|ref|XP_002820940.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 2
[Pongo abelii]
Length = 979
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYCHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYCHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYCHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.1 bits (100), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|428178045|gb|EKX46922.1| hypothetical protein GUITHDRAFT_86569 [Guillardia theta CCMP2712]
Length = 306
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/245 (28%), Positives = 111/245 (45%), Gaps = 32/245 (13%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
TP+ V G V +VACG H AL+ G+ Y+WG+ G+LG GD +
Sbjct: 83 TPALVSALQGKHVKQVACGWHHTCALIDNGQ--------LYTWGSGEYGRLGHGDEVRQA 134
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
PK++E+ V V G FH++++ ++L T+G G GQLGHG
Sbjct: 135 SPKLVESLQGKE---VTFVAAGGFHSSVII---EGGNLL-----TWGGGYFGQLGHGDET 183
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
P+ VK + Q + V CG HT +++ + +VW+WG + L +
Sbjct: 184 DRKTPKMVKGVQQCIAH-EVACGTHHTLMLTQSQEVWTWGSGE------FGKLGIGDEEK 236
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
PI+I+ + + ++ G H+ +T +G L++WG G G LG G
Sbjct: 237 HAEPIMIT-----ALQGVGVIHISTGGFHSAALTSEGV-LYTWGGGDKGQLGHGDENSQN 290
Query: 357 APAIV 361
P +V
Sbjct: 291 IPVVV 295
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 109/248 (43%), Gaps = 38/248 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-- 175
P V F G V +V+CG++H L+ GE +++G N GQLG G +
Sbjct: 30 PRLVVAFLGFNVRQVSCGNQHTAILMENGEV--------FTFGRGNFGQLGQGASVTANV 81
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P ++ V +V CG HT L N L +T+G GE G+LGHG
Sbjct: 82 STPALVSALQGKH---VKQVACGWHHTCALI----DNGQL----YTWGSGEYGRLGHGDE 130
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
P+ V+ L Q + V G FH+SV+ G++ +WG L +
Sbjct: 131 VRQASPKLVESL-QGKEVTFVAAGGFHSSVIIEGGNLLTWGGGY------FGQLGHGDET 183
Query: 296 DAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D +P ++ G Q + +VACG HT+++T ++W+WG G G LG G
Sbjct: 184 DRKTPKMVKG-------VQQCIAHEVACGTHHTLMLTQS-QEVWTWGSGEFGKLGIGDEE 235
Query: 354 DFFAPAIV 361
P ++
Sbjct: 236 KHAEPIMI 243
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 97/213 (45%), Gaps = 38/213 (17%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YSWG GQLG GD +++ +P+++ F + V +V+CG+ HTA+L M
Sbjct: 9 YSWGQGVLGQLGHGDEKTQRQPRLVVAF---LGFNVRQVSCGNQHTAIL--------MEN 57
Query: 217 SMCWTFGLGENGQLGHGTTQSALV--PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+TFG G GQLG G + +A V P V L Q ++ V CG HT + G +++
Sbjct: 58 GEVFTFGRGNFGQLGQGASVTANVSTPALVSAL-QGKHVKQVACGWHHTCALIDNGQLYT 116
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ------VACGAAHTVL 328
WG + R GD + PK + +Q VA G H+ +
Sbjct: 117 WG---------SGEYGRLGHGDEVRQA--------SPKLVESLQGKEVTFVAAGGFHSSV 159
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + G L +WG G G LG G D P +V
Sbjct: 160 IIEGG-NLLTWGGGYFGQLGHGDETDRKTPKMV 191
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 70/169 (41%), Gaps = 22/169 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V AGG S I G L WG G TP V +V
Sbjct: 146 EVTFVAAGGFHSSVIIEGGNLLTWGGGYFGQL---GHGDETDRKTPKMVKGVQQCIAHEV 202
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG+ H + L + E + +WG+ G+LG+GD E P +I V
Sbjct: 203 ACGTHHTLMLTQSQEVW--------TWGSGEFGKLGIGDEEKHAEPIMITALQ---GVGV 251
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
++ G FH+A LT E + +T+G G+ GQLGHG S +P
Sbjct: 252 IHISTGGFHSAALTS--------EGVLYTWGGGDKGQLGHGDENSQNIP 292
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 13/146 (8%)
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
S +++G G GQLGHG ++ P V + + V CG HT+++ G+V+++G
Sbjct: 6 SEVYSWGQGVLGQLGHGDEKTQRQPRLVVAFLGF-NVRQVSCGNQHTAILMENGEVFTFG 64
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
L AS+T N + +P L+S G H QVACG HT + D+G +
Sbjct: 65 RGNFGQLGQGASVTANVS----TPALVSALQGKH------VKQVACGWHHTCALIDNG-Q 113
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG G G LG G + +P +V
Sbjct: 114 LYTWGSGEYGRLGHGDEVRQASPKLV 139
Score = 40.4 bits (93), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 8/70 (11%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P + G V+ ++ G H AL S G V Y+WG + GQLG GD S+
Sbjct: 240 PIMITALQGVGVIHISTGGFHSAALTSEG--------VLYTWGGGDKGQLGHGDENSQNI 291
Query: 178 PKIIETFNQD 187
P ++E + D
Sbjct: 292 PVVVEVISCD 301
>gi|332218229|ref|XP_003258261.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 isoform 3
[Nomascus leucogenys]
Length = 979
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLLGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLVGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 129/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L+ S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLLGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL---V 188
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 189 GIPFMQVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKK---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLLGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>gi|301122653|ref|XP_002909053.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
gi|262099815|gb|EEY57867.1| RCC1 and BTB domain-containing protein, putative [Phytophthora
infestans T30-4]
Length = 611
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 112/244 (45%), Gaps = 36/244 (14%)
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V + G VV VAC H ++ G+ ++ G N+ GQLG+GD L P+
Sbjct: 166 VEELAGKRVVDVACSYFHTAIVMDNGD--------LHACGCNDYGQLGMGDHSGHLVPRP 217
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSAL 239
++ F + V V CG +T + + FG ++GQLG ++ L
Sbjct: 218 VDYFFR---HPVLAVACGQHYTVA--------SLRDGGVVAFGKNDHGQLGLDRVSEPVL 266
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDA 297
+P ++ + + CG HT++V+ G V+++G LGL + R ++
Sbjct: 267 LPTRLAPPLDRAVVPQLSCGYHHTAIVTEDGAVYTFGRNDYGQLGLGHKLHMARPTPVES 326
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+S + I+ QVACG HT+ ++DDG K++ +GR G LG ++D +
Sbjct: 327 LSRMRIT-------------QVACGCYHTLALSDDG-KVFPFGRNNHGQLGLETSMDCLS 372
Query: 358 PAIV 361
P ++
Sbjct: 373 PQLI 376
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/196 (30%), Positives = 87/196 (44%), Gaps = 38/196 (19%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES- 174
P PV F H V+ VACG + VA + G ++G N++GQLGL DR S
Sbjct: 213 LVPRPVDYFFRHPVLAVACGQHYTVASLRDGGV--------VAFGKNDHGQLGL-DRVSE 263
Query: 175 ------RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
RL P + V +++CG HTA++T + +TFG + G
Sbjct: 264 PVLLPTRLAPPLDRA-------VVPQLSCGYHHTAIVTE--------DGAVYTFGRNDYG 308
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG G P V+ L + + + V CG +HT +S G V+ +G +
Sbjct: 309 QLGLGHKLHMARPTPVESLSR-MRITQVACGCYHTLALSDDGKVFPFGRNN------HGQ 361
Query: 289 LTRNEAGDAISPILIS 304
L + D +SP LIS
Sbjct: 362 LGLETSMDCLSPQLIS 377
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 111/296 (37%), Gaps = 95/296 (32%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
+S+G N G+L LGD R P ++ + V +V CG+ T +L
Sbjct: 33 FSFGQNTYGELALGDTNDRSTPTRVDLGRINDTKHVVDVACGNEQTTILFENGDVFTCGY 92
Query: 206 ---------THRKRP---------------------NDMLESMC-----WTFGLGENGQL 230
T + P ++ L ++C +T G GQL
Sbjct: 93 NDSGQCAIGTTERVPSLRFSPGLSSHHTVRLFSGNGSEHLAALCANGFLYTVGFNMRGQL 152
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG---- 282
G GT + V+EL +V V C FHT++V GD+ + G + G+G
Sbjct: 153 GLGTATTVTEATLVEELAGK-RVVDVACSYFHTAIVMDNGDLHACGCNDYGQLGMGDHSG 211
Query: 283 -LCPN---------------------ASLT--------RNEAG----DAIS-PILISGNG 307
L P ASL +N+ G D +S P+L+
Sbjct: 212 HLVPRPVDYFFRHPVLAVACGQHYTVASLRDGGVVAFGKNDHGQLGLDRVSEPVLLPTR- 270
Query: 308 PHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P V Q++CG HT +VT+DG ++++GR G LG G + P V
Sbjct: 271 -LAPPLDRAVVPQLSCGYHHTAIVTEDG-AVYTFGRNDYGQLGLGHKLHMARPTPV 324
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 64/135 (47%), Gaps = 23/135 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +++CG H A+V+ ED Y++G N+ GQLGLG + RP +E+ ++
Sbjct: 280 VPQLSCGYHHT-AIVT-------EDGAVYTFGRNDYGQLGLGHKLHMARPTPVESLSR-- 329
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +V CG +HT L+ + + FG +GQLG T+ L P+ + L
Sbjct: 330 -MRITQVACGCYHTLALSD--------DGKVFPFGRNNHGQLGLETSMDCLSPQLISTLR 380
Query: 249 QYVYLVSVDCGLFHT 263
V G +H+
Sbjct: 381 NK----PVAAGFYHS 391
>gi|449447434|ref|XP_004141473.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 152/348 (43%), Gaps = 72/348 (20%)
Query: 51 FLTIGAPD--SLEDDSKTNHKAPIKIC--------SVKAGGMMSLAI----DNAGAL--- 93
T GA D L D ++ K P K+ SV G + AI +N G L
Sbjct: 81 LFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTC 140
Query: 94 --WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
W+WG + + +FTP + + +V+CG+ HVVAL G+
Sbjct: 141 RLWIWGQ----NQGSNFPRLFWGAFTPQTI-------IRQVSCGAVHVVALSDDGQLQ-- 187
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQ---DSP--WAVYEVTCGSFHTALL 205
+WG N GQLG G L+ +II F + ++P + +V+CG +H+A +
Sbjct: 188 ------AWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAI 241
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSA---LVPEQVKELPQYVYLVSVDCGLFH 262
+ +T+GLG GQLGH + QSA L+P +V L + + + CG H
Sbjct: 242 SENGE--------VYTWGLGSMGQLGHCSLQSADKELIPRRVVALDG-ICVKDIACGGVH 292
Query: 263 TSVVSSAGDVWSWGMEKGLGLC--PNASLTRNEAGDAIS-----PILISGNGPHGPKFQD 315
T ++ G +++WG + L P AGD+ + P+++ +G
Sbjct: 293 TCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQ------ 346
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
VACG +HT++ T DG ++ WG G K+ + P+ V W
Sbjct: 347 --HVACGHSHTLVSTKDG-RIHGWGYNSYGQAANEKSTYAWYPSPVDW 391
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 104/264 (39%), Gaps = 75/264 (28%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ +ACG EH A+ S G + +WGAN+ GQLG G E PK + NQ
Sbjct: 63 LDIACGREHTAAVASDGSLF--------TWGANDFGQLGDGTEEKSKLPKKV---NQLQG 111
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMC-----------------W------------ 220
V V+CG+ TA + R ND S C W
Sbjct: 112 EFVKSVSCGAHCTAAIA-EPRENDGTLSTCRLWIWGQNQGSNFPRLFWGAFTPQTIIRQV 170
Query: 221 -----------------TFGLGENGQLGHGTTQSALVPEQV--------KELPQYVYLVS 255
+G E GQLG G T L ++ E P+ V +
Sbjct: 171 SCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITK 230
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V CG +H++ +S G+V++WG+ +G + SL A + P + G +D
Sbjct: 231 VSCGEYHSAAISENGEVYTWGLGS-MGQLGHCSL--QSADKELIPRRVV--ALDGICVKD 285
Query: 316 PVQVACGAAHTVLVTDDGYKLWSW 339
+ACG HT +T +G L++W
Sbjct: 286 ---IACGGVHTCAITQNG-SLYAW 305
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR------PKIIETFNQ-DSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ G ++ +LR P + + +S W ++ CG HTA +
Sbjct: 22 YVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINSRW--LDIACGREHTAAVAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G + GQLG GT + + +P++V +L Q ++ SV CG T+ ++
Sbjct: 78 ------DGSLFTWGANDFGQLGDGTEEKSKLPKKVNQL-QGEFVKSVSCGAHCTAAIAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G ++ R G A +P I QV+
Sbjct: 131 RENDGTLSTCRLWIWGQNQG------SNFPRLFWG-AFTPQTI------------IRQVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H V ++DDG +L +WG G LG G T + A ++
Sbjct: 172 CGAVHVVALSDDG-QLQAWGYNEYGQLGRGVTSEGLQGARII 212
>gi|115463633|ref|NP_001055416.1| Os05g0384800 [Oryza sativa Japonica Group]
gi|113578967|dbj|BAF17330.1| Os05g0384800 [Oryza sativa Japonica Group]
Length = 1086
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 136/297 (45%), Gaps = 30/297 (10%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT 128
A + I V G + A+ +G L+ WGN +S G + VS + P V G
Sbjct: 360 ANMNIELVACGEYHTCAVTLSGDLYTWGNG-TSNSGLLGHGNEVSHWVPKRVNGPLEGIH 418
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + SAG+ +++G + G LG GDR+S P+ +E+
Sbjct: 419 VSAISCGPWHTAIVTSAGQ--------LFTFGDGSFGVLGHGDRQSLSVPREVESLKG-- 468
Query: 189 PWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V
Sbjct: 469 -LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCV 527
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
L + + + CG T ++++G V++ G P N D + P+ +
Sbjct: 528 AALVEPNF-CQIACGHCMTVALTTSGHVYTMG-------SPVYGQLGNPQADGMLPVRVE 579
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G F + +++CGA H ++T ++++WG+G +G LG G T D +P +V
Sbjct: 580 GK--LHKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRSSPTLV 631
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + GE Y SWG + G+LG G +PK+I+ +
Sbjct: 312 VQNISCGGRHATLVTKQGEIY--------SWGEESGGRLGHGVDCDVPQPKLIDAL---A 360
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG +HT +T D+ W G +G LGHG S VP++V
Sbjct: 361 NMNIELVACGEYHTCAVT---LSGDL---YTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 414
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ +++ ++ CG +HT++V+SAG ++++G LG SL+ +++ +
Sbjct: 415 EGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRT--- 471
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDF 355
V+ ACG HT V + K+++WG G G LG G
Sbjct: 472 ----------VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTR 521
Query: 356 FAPAIV 361
P V
Sbjct: 522 LVPTCV 527
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 97/257 (37%), Gaps = 83/257 (32%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + ++ G + + +AG L+ +G +G F ++ S P V
Sbjct: 417 IHVSAISCGPWHTAIVTSAGQLFTFG---------DGSFGVLGHGDRQSLSVPREVESLK 467
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG GD+++RL P
Sbjct: 468 GLRTVRAACGVWHTAAVV---EVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP 524
Query: 179 KIIETFNQDS---------------------------------PWA-------------- 191
+ + + P A
Sbjct: 525 TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHK 584
Query: 192 --VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V E++CG++H A+LT R + +T+G G NG+LGHG T P V+ L
Sbjct: 585 NFVEEISCGAYHVAVLTSR--------TEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD 636
Query: 250 YVYLVSVDCGLFHTSVV 266
+ +V CG+ T+ +
Sbjct: 637 K-QVRTVVCGINFTAAI 652
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
C + G M++A+ +G ++ G+ P+ + G P V H + V ++
Sbjct: 535 FCQIACGHCMTVALTTSGHVYTMGS-PV---YGQLGNPQADGMLPVRVEGKLHKNFVEEI 590
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ HV L S E Y +WG NG+LG GD + R P ++E V
Sbjct: 591 SCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRSSPTLVEALKDKQ---V 639
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMC 219
V CG TA + K + + +SMC
Sbjct: 640 RTVVCGINFTAAICIHKWVSGVDQSMC 666
>gi|222631437|gb|EEE63569.1| hypothetical protein OsJ_18386 [Oryza sativa Japonica Group]
Length = 1132
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 36/313 (11%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT 128
A + I V G + A+ +G L+ WGN +S G + VS + P V G
Sbjct: 406 ANMNIELVACGEYHTCAVTLSGDLYTWGNG-TSNSGLLGHGNEVSHWVPKRVNGPLEGIH 464
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + SAG+ +++G + G LG GDR+S P+ +E+
Sbjct: 465 VSAISCGPWHTAIVTSAGQ--------LFTFGDGSFGVLGHGDRQSLSVPREVESLKG-- 514
Query: 189 PWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V
Sbjct: 515 -LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCV 573
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
L + + + CG T ++++G V++ G P N D + P+ +
Sbjct: 574 AALVEPNF-CQIACGHCMTVALTTSGHVYTMG-------SPVYGQLGNPQADGMLPVRVE 625
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G F + +++CGA H ++T ++++WG+G +G LG G T D +P +V
Sbjct: 626 GK--LHKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRSSPTLV--- 677
Query: 365 PLTEEFKQDELNT 377
E K ++ T
Sbjct: 678 ---EALKDKQVRT 687
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + GE Y SWG + G+LG G +PK+I+
Sbjct: 358 VQNISCGGRHATLVTKQGEIY--------SWGEESGGRLGHGVDCDVPQPKLIDALAN-- 407
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG +HT +T D+ W G +G LGHG S VP++V
Sbjct: 408 -MNIELVACGEYHTCAVT---LSGDL---YTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 460
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ +++ ++ CG +HT++V+SAG ++++G LG SL+ +++ +
Sbjct: 461 EGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRT--- 517
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDF 355
V+ ACG HT V + K+++WG G G LG G
Sbjct: 518 ----------VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTR 567
Query: 356 FAPAIV 361
P V
Sbjct: 568 LVPTCV 573
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 97/257 (37%), Gaps = 83/257 (32%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + ++ G + + +AG L+ +G +G F ++ S P V
Sbjct: 463 IHVSAISCGPWHTAIVTSAGQLFTFG---------DGSFGVLGHGDRQSLSVPREVESLK 513
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG GD+++RL P
Sbjct: 514 GLRTVRAACGVWHTAAVV---EVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP 570
Query: 179 KIIETFNQDS---------------------------------PWA-------------- 191
+ + + P A
Sbjct: 571 TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHK 630
Query: 192 --VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V E++CG++H A+LT R + +T+G G NG+LGHG T P V+ L
Sbjct: 631 NFVEEISCGAYHVAVLTSR--------TEVYTWGKGANGRLGHGDTDDRSSPTLVEALKD 682
Query: 250 YVYLVSVDCGLFHTSVV 266
+ +V CG+ T+ +
Sbjct: 683 K-QVRTVVCGINFTAAI 698
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 16/147 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
C + G M++A+ +G ++ G+ P+ + G P V H + V ++
Sbjct: 581 FCQIACGHCMTVALTTSGHVYTMGS-PV---YGQLGNPQADGMLPVRVEGKLHKNFVEEI 636
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ HV L S E Y +WG NG+LG GD + R P ++E V
Sbjct: 637 SCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRSSPTLVEALKDKQ---V 685
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMC 219
V CG TA + K + + +SMC
Sbjct: 686 RTVVCGINFTAAICIHKWVSGVDQSMC 712
>gi|449481389|ref|XP_004156168.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Cucumis sativus]
Length = 485
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 152/348 (43%), Gaps = 72/348 (20%)
Query: 51 FLTIGAPD--SLEDDSKTNHKAPIKIC--------SVKAGGMMSLAI----DNAGAL--- 93
T GA D L D ++ K P K+ SV G + AI +N G L
Sbjct: 81 LFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTR 140
Query: 94 --WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
W+WG + + +FTP + + +V+CG+ HVVAL G+
Sbjct: 141 RLWIWGQ----NQGSNFPRLFWGAFTPQTI-------IRQVSCGAVHVVALSDDGQLQ-- 187
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQ---DSP--WAVYEVTCGSFHTALL 205
+WG N GQLG G L+ +II F + ++P + +V+CG +H+A +
Sbjct: 188 ------AWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAI 241
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSA---LVPEQVKELPQYVYLVSVDCGLFH 262
+ +T+GLG GQLGH + QSA L+P +V L + + + CG H
Sbjct: 242 SENGE--------VYTWGLGSMGQLGHCSLQSADKELIPRRVVALDG-ICVKDIACGGVH 292
Query: 263 TSVVSSAGDVWSWGMEKGLGLC--PNASLTRNEAGDAIS-----PILISGNGPHGPKFQD 315
T ++ G +++WG + L P AGD+ + P+++ +G
Sbjct: 293 TCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQ------ 346
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
VACG +HT++ T DG ++ WG G K+ + P+ V W
Sbjct: 347 --HVACGHSHTLVSTKDG-RIHGWGYNSYGQAANEKSTYAWYPSPVDW 391
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 73/263 (27%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ +ACG EH A+ S G + +WGAN+ GQLG G E PK + NQ
Sbjct: 63 LDIACGREHTAAVASDGSLF--------TWGANDFGQLGDGTEEKSKLPKKV---NQLQG 111
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLES----------------MCW------------- 220
V V+CG+ TA + + + L + + W
Sbjct: 112 EFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFPRLFWGAFTPQTIIRQVS 171
Query: 221 ----------------TFGLGENGQLGHGTTQSALVPEQV--------KELPQYVYLVSV 256
+G E GQLG G T L ++ E P+ V + V
Sbjct: 172 CGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKV 231
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
CG +H++ +S G+V++WG+ +G + SL A + P + G +D
Sbjct: 232 SCGEYHSAAISENGEVYTWGLGS-MGQLGHCSL--QSADKELIPRRVV--ALDGICVKD- 285
Query: 317 VQVACGAAHTVLVTDDGYKLWSW 339
+ACG HT +T +G L++W
Sbjct: 286 --IACGGVHTCAITQNG-SLYAW 305
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR------PKIIETFNQ-DSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ G ++ +LR P + + +S W ++ CG HTA +
Sbjct: 22 YVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINSRW--LDIACGREHTAAVAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G + GQLG GT + + +P++V +L Q ++ SV CG T+ ++
Sbjct: 78 ------DGSLFTWGANDFGQLGDGTEEKSKLPKKVNQL-QGEFVKSVSCGAHCTAAIAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G ++ R G A +P I QV+
Sbjct: 131 RENDGTLSTRRLWIWGQNQG------SNFPRLFWG-AFTPQTI------------IRQVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H V ++DDG +L +WG G LG G T + A ++
Sbjct: 172 CGAVHVVALSDDG-QLQAWGYNEYGQLGRGVTSEGLQGARII 212
>gi|326923408|ref|XP_003207928.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Meleagris gallopavo]
Length = 1056
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ I P +++ S+ I+I V G SLA+
Sbjct: 113 DGQLGLPGTEE----------CIRVPRNIKSLSE------IQIVQVACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G+ +P + G ++A G H L +G
Sbjct: 157 EVFSWGQNKYGQLGL--GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ V + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK---VVHICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HT+ V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGTTSNRKSPFTVKGN 344
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 50/306 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG +T+G L + P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LATDGQLGLPGTEECIRVPRNIKSLSEIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL E + SWG N GQLGLG + + + P +I++
Sbjct: 140 VQVACGYYHSLALSKGSEVF--------SWGQNKYGQLGLGYEYKKQNSPHVIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+A ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFA--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+ ++ G V+++G G G L N I+P + G
Sbjct: 240 RTQKVVHICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKVFELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL--W 363
+ Q+ CG HT +++S+G G +G LGTG T + +P V W
Sbjct: 294 SLV--------TQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNW 345
Query: 364 PPLTEE 369
P + +
Sbjct: 346 LPYSTQ 351
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 100/250 (40%), Gaps = 64/250 (25%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL------------ 204
WG + GQLGLG D E L P+ + F + +V CG HT
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR---IRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 205 -----LTH---RKRP------------------------NDMLESMCWTFGLGENGQLG- 231
L H RKRP ND + W GL +GQLG
Sbjct: 61 NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAW--GLATDGQLGL 118
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GT + VP +K L + + +V V CG +H+ +S +V+SWG K L +
Sbjct: 119 PGTEECIRVPRNIKSLSE-IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I +L G F Q+A G AH+ ++T G ++ WGR + G LG
Sbjct: 178 QNSPHVIKSLL-------GIPF---AQIAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLND 226
Query: 352 TIDFFAPAIV 361
D + P ++
Sbjct: 227 DNDRYVPTLL 236
Score = 45.1 bits (105), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + R E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKARKRPEHVGALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLATDGQLG 117
>gi|326923406|ref|XP_003207927.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
1 [Meleagris gallopavo]
Length = 1048
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ I P +++ S+ I+I V G SLA+
Sbjct: 113 DGQLGLPGTEE----------CIRVPRNIKSLSE------IQIVQVACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G+ +P + G ++A G H L +G
Sbjct: 157 EVFSWGQNKYGQLGL--GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ V + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK---VVHICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HT+ V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGTTSNRKSPFTVKGN 344
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 50/306 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG +T+G L + P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LATDGQLGLPGTEECIRVPRNIKSLSEIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL E + SWG N GQLGLG + + + P +I++
Sbjct: 140 VQVACGYYHSLALSKGSEVF--------SWGQNKYGQLGLGYEYKKQNSPHVIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+A ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFA--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+ ++ G V+++G G G L N I+P + G
Sbjct: 240 RTQKVVHICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKVFELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL--W 363
+ Q+ CG HT +++S+G G +G LGTG T + +P V W
Sbjct: 294 SLV--------TQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNW 345
Query: 364 PPLTEE 369
P + +
Sbjct: 346 LPYSTQ 351
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 100/250 (40%), Gaps = 64/250 (25%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL------------ 204
WG + GQLGLG D E L P+ + F + +V CG HT
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR---IRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 205 -----LTH---RKRP------------------------NDMLESMCWTFGLGENGQLG- 231
L H RKRP ND + W GL +GQLG
Sbjct: 61 NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAW--GLATDGQLGL 118
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GT + VP +K L + + +V V CG +H+ +S +V+SWG K L +
Sbjct: 119 PGTEECIRVPRNIKSLSE-IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I +L G F Q+A G AH+ ++T G ++ WGR + G LG
Sbjct: 178 QNSPHVIKSLL-------GIPF---AQIAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLND 226
Query: 352 TIDFFAPAIV 361
D + P ++
Sbjct: 227 DNDRYVPTLL 236
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + R E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKARKRPEHVGALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLATDGQLG 117
>gi|146169381|ref|XP_001471365.1| regulator of chromosome condensation [Tetrahymena thermophila]
gi|146145109|gb|EDK31655.1| regulator of chromosome condensation [Tetrahymena thermophila
SB210]
Length = 448
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 132/319 (41%), Gaps = 70/319 (21%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ G+ L G SL +SF P V + V++V+CG H A++ +GE +
Sbjct: 41 GYLYTMGSNALGKLGI-GQQSLQNSFQPQLVSALSKYKVMQVSCGHSHTCAIIDSGELF- 98
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRK 209
SWG ++ GQLG+ S P+++ + + V +V+CG +HT +
Sbjct: 99 -------SWGDSSEGQLGINSNGSHYNPQLVNFSDLKGINTFVTDVSCGYYHTVAVLKNG 151
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ +C +FG G+ GQLG G P + L Q ++ V CG +HT + +
Sbjct: 152 Q-------VC-SFGSGKKGQLGTGNQNKQYKPFLLNSLSQ---IIKVKCGFYHTLFLDES 200
Query: 270 GDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISG----------NGPHGPKFQDPV 317
G V+S G+ E LG N G+ SP L+ G H D
Sbjct: 201 GRVYSCGLNDEGQLGQGHNE-------GNISSPRLVLELEHSFIKKIFAGSHSAAITDAN 253
Query: 318 QV---------------------------ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
++ + G V VT DG K++SWG + G LG G
Sbjct: 254 EIYFFGKSQLGQFLYPQLVRICQGDVNEISIGNHFGVAVTYDG-KVYSWGINQQGQLGQG 312
Query: 351 KTIDFFAPAIVLWPPLTEE 369
+ P++V PL E+
Sbjct: 313 DSDVRIIPSLV--EPLNEK 329
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 101/241 (41%), Gaps = 39/241 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFN 185
+ ++ACG +H + G Y+ G+N G+LG+G + ++ +P+++
Sbjct: 23 VIHQLACGLDHTAFVAKNG--------YLYTMGSNALGKLGIGQQSLQNSFQPQLVSAL- 73
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
S + V +V+CG HT + D E W G GQLG + S P+ V
Sbjct: 74 --SKYKVMQVSCGHSHTCAII------DSGELFSW--GDSSEGQLGINSNGSHYNPQLVN 123
Query: 246 --ELPQY-VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+L ++ V CG +HT V G V S+G K L P L
Sbjct: 124 FSDLKGINTFVTDVSCGYYHTVAVLKNGQVCSFGSGK------KGQLGTGNQNKQYKPFL 177
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI-DFFAPAIV 361
++ ++V CG HT+ + + G +++S G G LG G + +P +V
Sbjct: 178 LN-------SLSQIIKVKCGFYHTLFLDESG-RVYSCGLNDEGQLGQGHNEGNISSPRLV 229
Query: 362 L 362
L
Sbjct: 230 L 230
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 66/169 (39%), Gaps = 43/169 (25%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 131
+I VK G +L +D +G ++ +C L D G G + + +P V + + K
Sbjct: 183 QIIKVKCGFYHTLFLDESGRVY---SCGLNDEGQLGQGHNEGNISSPRLVLELEHSFIKK 239
Query: 132 VACGSEHVVALVSAGETY-------------------KGE----------------DLVC 156
+ GS H A+ A E Y +G+ D
Sbjct: 240 IFAGS-HSAAITDANEIYFFGKSQLGQFLYPQLVRICQGDVNEISIGNHFGVAVTYDGKV 298
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
YSWG N GQLG GD + R+ P ++E N+ V TCG + L
Sbjct: 299 YSWGINQQGQLGQGDSDVRIIPSLVEPLNEKK---VISATCGENYVICL 344
>gi|218193272|gb|EEC75699.1| hypothetical protein OsI_12517 [Oryza sativa Indica Group]
Length = 555
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 90/348 (25%), Positives = 136/348 (39%), Gaps = 96/348 (27%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGG---FSLVSSFTPSPV-W-DFHGHTVVKVAC 134
GG+ + A+++WG ++ +G + S P W D + VAC
Sbjct: 84 GGLRVAGVPTKSAIYLWGYNHSGQTARKGKECHLRIPKSLPPKLFKWQDGKNLRWIDVAC 143
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H A+ S G Y +WGAN+ GQLG G ES P+ ++ + V
Sbjct: 144 GRGHTAAVASDGSLY--------TWGANDFGQLGDGTEESAKEPQKVKALETE---FVKS 192
Query: 195 VTCGSFHTALLTHRKRPNDML-ESMCWTFG------------------------------ 223
V+CG+ TA + + N + S W +G
Sbjct: 193 VSCGAHCTAAVAEPRENNGTISRSRLWVWGQNQGSDYPRLFWGALAPNTVIRQVSCGAVH 252
Query: 224 --------------LGENGQLGHGTTQSALVPEQV--------KELPQYVYLVSVDCGLF 261
E GQLG G T L +V E P+ V +V V CG +
Sbjct: 253 VMALSEDGLLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDEAPELVKIVRVSCGEY 312
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD---------AISPILISGNGPHGPK 312
HT+ +S G+V++WG+ +G + SL ++GD A+ +I
Sbjct: 313 HTAAISENGEVYTWGL-GSMGQLGHCSL---QSGDKELIPRRVVALDRTVIR-------- 360
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
V+CG H+ VT+DG L++WG G G LG G FF+ A+
Sbjct: 361 -----DVSCGGVHSCAVTEDG-ALYAWGGGHVGQLGLGPQSGFFSCAL 402
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 39/164 (23%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG-----LGDRESRLRPKIIET 183
+V+V+CG H A+ GE Y +WG + GQLG GD+E L P+ +
Sbjct: 304 IVRVSCGEYHTAAISENGEVY--------TWGLGSMGQLGHCSLQSGDKE--LIPRRVVA 353
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ------- 236
++ + +V+CG H+ +T + + +G G GQLG G
Sbjct: 354 LDRT---VIRDVSCGGVHSCAVTE--------DGALYAWGGGHVGQLGLGPQSGFFSCAL 402
Query: 237 --SALVPEQVKEL--PQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
S ++ + L P V LV+ CG HT V ++ WG
Sbjct: 403 NGSDMLLRNIPVLIIPSGVQLVT--CGHSHTLVSMKDSRIYGWG 444
Score = 42.7 bits (99), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 79/214 (36%), Gaps = 43/214 (20%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS---SFTPSPVWDFHGHT 128
+KI V G + AI G ++ WG L G SL S P V
Sbjct: 302 VKIVRVSCGEYHTAAISENGEVYTWG---LGSMGQLGHCSLQSGDKELIPRRVVALDRTV 358
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-------------DRESR 175
+ V+CG H A+ ED Y+WG + GQLGLG D R
Sbjct: 359 IRDVSCGGVHSCAVT--------EDGALYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLR 410
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P +I P V VTCG HT + M +S + +G GQ + +
Sbjct: 411 NIPVLI------IPSGVQLVTCGHSHTLV--------SMKDSRIYGWGYNSYGQAANEKS 456
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
A P V V ++ G H++V++ A
Sbjct: 457 TYAWFPSPVDWCVGEVRRLAAGGG--HSAVLTDA 488
>gi|357121203|ref|XP_003562310.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 480
Score = 86.7 bits (213), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 94/340 (27%), Positives = 147/340 (43%), Gaps = 74/340 (21%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAI----DNAGA-----LWMWGNCPLPDSS 105
G +S ++ K N + SV G + AI +N G LW+WG +
Sbjct: 95 GTEESAKEPKKVNAIETEFVKSVSCGAHCTAAIAEPRENDGTISKSRLWVWGQ----NQG 150
Query: 106 TEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
++ +F P+ V +++V+CG+ HV+AL ED V +WG N G
Sbjct: 151 SDYPRLFWGAFAPNTV-------ILQVSCGAVHVMAL--------SEDGVLQAWGYNEYG 195
Query: 166 QLGLGDRESRLR-PKIIETFNQ---DSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMC 219
QLG G L+ +++ + + D+P V V+CG +H A ++
Sbjct: 196 QLGRGCTSEGLQGARVLNAYARFLDDAPELVKIVRVSCGEYHAAAISEHGE--------V 247
Query: 220 WTFGLGENGQLGHGTTQSA---LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+GLG GQLGH + QS L+P +V L V V CG H+ V+ G +++WG
Sbjct: 248 YTWGLGSMGQLGHRSLQSGDKELIPRRVVALEGMV-AGDVSCGGVHSCAVTEGGTLYAWG 306
Query: 277 --MEKGLGLCPNAS-----------LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
LGL P + L RN P+L+ P G + V CG
Sbjct: 307 GGHVGQLGLGPQSGFFSCALNGSDMLLRN------IPVLVI---PSGVRL-----VTCGH 352
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
+HT++ DG +++ WG G K+ + P+ V W
Sbjct: 353 SHTLISMKDG-RIYGWGYNSYGQAANEKSTYAWYPSPVDW 391
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 115/284 (40%), Gaps = 73/284 (25%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ +ACG EH A+ S G ++WGAN+ GQLG G ES PK + +
Sbjct: 63 IDIACGREHTAAVASDGSL--------FTWGANDFGQLGDGTEESAKEPKKVNAIETE-- 112
Query: 190 WAVYEVTCGSFHTALLTH-RKRPNDMLESMCW---------------------------- 220
V V+CG+ TA + R+ + +S W
Sbjct: 113 -FVKSVSCGAHCTAAIAEPRENDGTISKSRLWVWGQNQGSDYPRLFWGAFAPNTVILQVS 171
Query: 221 ----------------TFGLGENGQLGHGTTQSALVPEQV--------KELPQYVYLVSV 256
+G E GQLG G T L +V + P+ V +V V
Sbjct: 172 CGAVHVMALSEDGVLQAWGYNEYGQLGRGCTSEGLQGARVLNAYARFLDDAPELVKIVRV 231
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
CG +H + +S G+V++WG+ +G + SL + + I +++ G
Sbjct: 232 SCGEYHAAAISEHGEVYTWGLGS-MGQLGHRSLQSGDK-ELIPRRVVALEG------MVA 283
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
V+CG H+ VT+ G L++WG G G LG G FF+ A+
Sbjct: 284 GDVSCGGVHSCAVTEGG-TLYAWGGGHVGQLGLGPQSGFFSCAL 326
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 99/222 (44%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR------PKIIETFN-QDSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ ++ LR PK+ + + ++ W ++ CG HTA +
Sbjct: 22 YIWGYNQSGQTARKGKDRHLRIPKSLPPKLFKCRDGENLRW--IDIACGREHTAAVAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G + GQLG GT +SA P++V + + ++ SV CG T+ ++
Sbjct: 78 ------DGSLFTWGANDFGQLGDGTEESAKEPKKVNAI-ETEFVKSVSCGAHCTAAIAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G + R G A +P + +QV+
Sbjct: 131 RENDGTISKSRLWVWGQNQG------SDYPRLFWG-AFAPNTV------------ILQVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H + +++DG L +WG G LG G T + A VL
Sbjct: 172 CGAVHVMALSEDGV-LQAWGYNEYGQLGRGCTSEGLQGARVL 212
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 55/214 (25%), Positives = 77/214 (35%), Gaps = 43/214 (20%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHT 128
+KI V G + AI G ++ WG L G SL S P V G
Sbjct: 226 VKIVRVSCGEYHAAAISEHGEVYTWG---LGSMGQLGHRSLQSGDKELIPRRVVALEGMV 282
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-------------DRESR 175
V+CG H A+ G Y+WG + GQLGLG D R
Sbjct: 283 AGDVSCGGVHSCAVTEGG--------TLYAWGGGHVGQLGLGPQSGFFSCALNGSDMLLR 334
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P ++ P V VTCG HT + M + + +G GQ + +
Sbjct: 335 NIPVLV------IPSGVRLVTCGHSHTLI--------SMKDGRIYGWGYNSYGQAANEKS 380
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
A P V V ++ G H++V++ A
Sbjct: 381 TYAWYPSPVDWCVGEVRRLAAGGG--HSAVLTDA 412
>gi|118092565|ref|XP_001231234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Gallus
gallus]
Length = 1056
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 111/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ I P +++ S+ I+I V G SLA+
Sbjct: 113 DGQLGLPGTEE----------CIRVPRNIKSLSE------IQIVQVACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G+ +P + G ++A G H L +G
Sbjct: 157 EVFSWGQNKYGQLGL--GYEYKKQNSPHVIKSLLGIPFAQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ V + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRTQK---VVHICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HT+ V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSL-VTQITCGRQHTTAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGTTSNRKSPFTVKGN 344
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 134/306 (43%), Gaps = 50/306 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG +T+G L + P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LATDGQLGLPGTEECIRVPRNIKSLSEIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL E + SWG N GQLGLG + + + P +I++
Sbjct: 140 VQVACGYYHSLALSKGSEVF--------SWGQNKYGQLGLGYEYKKQNSPHVIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+A ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFA--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+ ++ G V+++G G G L N I+P + G
Sbjct: 240 RTQKVVHICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKVFELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL--W 363
+ Q+ CG HT +++S+G G +G LGTG T + +P V W
Sbjct: 294 SLV--------TQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGNW 345
Query: 364 PPLTEE 369
P + +
Sbjct: 346 LPYSTQ 351
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 100/250 (40%), Gaps = 64/250 (25%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL------------ 204
WG + GQLGLG D E L P+ + F + +V CG HT
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR---IRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 205 -----LTH---RKRP------------------------NDMLESMCWTFGLGENGQLG- 231
L H RKRP ND + W GL +GQLG
Sbjct: 61 NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAW--GLATDGQLGL 118
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GT + VP +K L + + +V V CG +H+ +S +V+SWG K L +
Sbjct: 119 PGTEECIRVPRNIKSLSE-IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I +L G F Q+A G AH+ ++T G ++ WGR + G LG
Sbjct: 178 QNSPHVIKSLL-------GIPF---AQIAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLND 226
Query: 352 TIDFFAPAIV 361
D + P ++
Sbjct: 227 DNDRYVPTLL 236
Score = 45.1 bits (105), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRIRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + R E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKARKRPEHVGALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLATDGQLG 117
>gi|427794767|gb|JAA62835.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase, partial [Rhipicephalus pulchellus]
Length = 1181
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 47/348 (13%)
Query: 29 CCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAID 88
C L + S+ C F +G S+ + + +I +V G SLA+
Sbjct: 98 CGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALS 157
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+AG ++ WG C + G S P + +V++ACG+ H +AL + GE
Sbjct: 158 DAGQVFSWG-CN-RNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGEL 215
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ SWG N +GQLGLG R+S ++ + + V CG+ H+ LT
Sbjct: 216 F--------SWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-- 264
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
P+ + + +G GQLG + L P +K L + + V CG HT+ +++
Sbjct: 265 --PSGTV----FVWGRNSCGQLGLSDQRDRLHPTVLKPL-RSQRIKHVCCGENHTAALTA 317
Query: 269 AGDVWSWGM----EKGLGLCPNASLTRNEA---GDAISPILISGNGPHGPKFQDPVQVAC 321
G V+++G + G G+ N ++ R G AIS Q++C
Sbjct: 318 DGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAIS------------------QLSC 359
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV--LWPPLT 367
G HTV +L+ +G G SG LG G P V LW +T
Sbjct: 360 GRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPGLWHGVT 407
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTP----SPVWDFHGHTVVKVACGSEHVVALVSAGET 148
L+ WG P + G V + TP V F V +VACG +H + L++ G
Sbjct: 53 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 112
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y S GAN+ GQLG DR R +E S + V CG H+ L+
Sbjct: 113 Y--------SCGANDFGQLG-QDRSMR----KLEQVAALSAHEIRAVACGEAHSLALS-- 157
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
D + W G NGQLG GT +S L P+ +K+L +++V + CG H ++
Sbjct: 158 ----DAGQVFSW--GCNRNGQLGCGTEEESRLRPKVIKKLAT-LHIVQIACGAVHCLALA 210
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHT 326
+ G+++SWG L L R+ G+ P +S P+ VACGA H+
Sbjct: 211 NNGELFSWGGNASGQL----GLGRDSTGNERLPRRVSH------LVGVPLALVACGAMHS 260
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 372
V +T G ++ WGR G LG D P VL P ++ K
Sbjct: 261 VGLTPSG-TVFVWGRNSCGQLGLSDQRDRLHPT-VLKPLRSQRIKH 304
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 151 GEDLVCYSWGANNNGQLGLG------DRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTA 203
G ++ YSWG NG+LGL D E+ + +P+ + F AV EV CG HT
Sbjct: 48 GAPMLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTR---AVREVACGHKHTL 104
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+L + ++ G + GQLG + L EQV L + + +V CG H+
Sbjct: 105 VL--------LANGSVYSCGANDFGQLGQDRSMRKL--EQVAALSAH-EIRAVACGEAHS 153
Query: 264 SVVSSAGDVWSWGMEKGLGL---CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+S AG V+SWG + L S R + ++ + I VQ+A
Sbjct: 154 LALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHI-------------VQIA 200
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
CGA H + + ++G +L+SWG SG LG G+
Sbjct: 201 CGAVHCLALANNG-ELFSWGGNASGQLGLGR 230
>gi|66818759|ref|XP_643039.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
gi|60471137|gb|EAL69105.1| hypothetical protein DDB_G0276695 [Dictyostelium discoideum AX4]
Length = 646
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 109/256 (42%), Gaps = 54/256 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ ++ACG H +A+ A + Y YSWG N GQLG GD+ +R +P ++ S
Sbjct: 135 IKQIACGDSHSLAI--AEQPYG-----VYSWGVNRWGQLGHGDQLNRNQPTLLSNIGSGS 187
Query: 189 PWAVYE----VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V CGS H+ ++++ +TFG G G+LGHG Q P V
Sbjct: 188 GSGNSISFSMVACGSQHSMIVSNYGE--------LYTFGCGTTGRLGHGDEQPKFKPTPV 239
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
L +VSV G+ H+S V S G ++SWG + G N S+
Sbjct: 240 SSLVGKS-IVSVAAGVMHSSCVDSNGKIYSWGWNR-YGQLGNGSVKSQTL---------- 287
Query: 305 GNGPHGPKFQDP-------------------VQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
P PKFQ+P ++V CG HT+ ++ G ++ +G G
Sbjct: 288 ---PTPPKFQNPKLSDIQQQQQQHHLMKLNFIKVVCGKNHTLALSSSG-EVVGFGFNACG 343
Query: 346 VLGTGKTIDFFAPAIV 361
LG G +D P +
Sbjct: 344 QLGNGNHMDQLYPVKI 359
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 92/222 (41%), Gaps = 37/222 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V G S+ + N G L+ +G C G F P+PV G ++V VA G
Sbjct: 198 VACGSQHSMIVSNYGELYTFG-CGTTGRLGHG--DEQPKFKPTPVSSLVGKSIVSVAAGV 254
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL--------RPKIIETFNQDS 188
H + S G+ YSWG N GQLG G +S+ PK+ + Q
Sbjct: 255 MHSSCVDSNGK--------IYSWGWNRYGQLGNGSVKSQTLPTPPKFQNPKLSDIQQQQQ 306
Query: 189 PWAVY-----EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
+ +V CG HT L+ FG GQLG+G L P +
Sbjct: 307 QHHLMKLNFIKVVCGKNHTLALSSSGE--------VVGFGFNACGQLGNGNHMDQLYPVK 358
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGL 283
+ E ++V + + G +H+ ++ G+ +SWG M G LGL
Sbjct: 359 I-EFNEHV--IDIASGYYHSLCLTDNGEAYSWGYMSDGSLGL 397
>gi|449504701|ref|XP_002190698.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Taeniopygia
guttata]
Length = 991
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 80/295 (27%), Positives = 115/295 (38%), Gaps = 49/295 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG G+ V P ++ S+ I+I V G SLA+
Sbjct: 113 DGQLGLPGTEECV----------RVPRNIRSLSE------IQIVQVACGYYHSLALSKGS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G+ +P + G ++A G H L +G
Sbjct: 157 EVFSWGQNKYGQLGL--GYEYKKQTSPQMIKSLLGIPFAQIAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ V + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDDNDRYVPTLLKSLRSQK---VVHICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL V + + CG HT+ V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSV-VTQITCGRQHTTAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN----GPHGPKFQDPVQVAC 321
++S+ GL N L + SP + G+ P P D + C
Sbjct: 315 RIYSF------GLGGNGQLGTGTTSNRKSPFTVKGSWIPFSPQCPMSTDSEECYC 363
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/305 (26%), Positives = 135/305 (44%), Gaps = 48/305 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG +T+G L + P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LATDGQLGLPGTEECVRVPRNIRSLSEIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL E + SWG N GQLGLG + + + P++I++
Sbjct: 140 VQVACGYYHSLALSKGSEVF--------SWGQNKYGQLGLGYEYKKQTSPQMIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+A ++ G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFA--QIAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDDNDRYVPTLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKVVHICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKVF---- 289
Query: 309 HGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL--WP 364
+ V Q+ CG HT +++S+G G +G LGTG T + +P V W
Sbjct: 290 ---ELMGSVVTQITCGRQHTTAFVPSSGRIYSFGLGGNGQLGTGTTSNRKSPFTVKGSWI 346
Query: 365 PLTEE 369
P + +
Sbjct: 347 PFSPQ 351
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 100/250 (40%), Gaps = 64/250 (25%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL------------ 204
WG + GQLGLG D E L P+ + F V +V CG HT
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFLNKR---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 205 -----LTH---RKRP------------------------NDMLESMCWTFGLGENGQLG- 231
L H RKRP ND + W GL +GQLG
Sbjct: 61 NDLGQLGHEKARKRPEHVGALDAQNIVAVSCGEAHTLALNDKGQVYAW--GLATDGQLGL 118
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GT + VP ++ L + + +V V CG +H+ +S +V+SWG K L +
Sbjct: 119 PGTEECVRVPRNIRSLSE-IQIVQVACGYYHSLALSKGSEVFSWGQNKYGQLGLGYEYKK 177
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ I +L G F Q+A G AH+ ++T G ++ WGR + G LG
Sbjct: 178 QTSPQMIKSLL-------GIPF---AQIAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLND 226
Query: 352 TIDFFAPAIV 361
D + P ++
Sbjct: 227 DNDRYVPTLL 236
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFLNKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + R E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKARKRPEHVGALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLATDGQLG 117
>gi|224589107|ref|NP_001139174.1| probable E3 ubiquitin-protein ligase HERC4-like [Danio rerio]
Length = 985
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 134/304 (44%), Gaps = 42/304 (13%)
Query: 63 DSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP-SPV 121
D N +K +K + S+ GA+ + + G L+ +T P+
Sbjct: 62 DEDCNQDGKLKQLDLKREKIRSIVCGEDGAVLL---------ADGGKVLLMDKYTVCRPL 112
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKI 180
V+++ACG +H VAL + G+ + WG N +GQLGL ++ ++ P+
Sbjct: 113 KGLDNTKVIQIACGDQHSVALSNDGQ--------LFVWGENAHGQLGLRKEQALIQSPQH 164
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
+++ V +++ G H+ +L+ L + + +G GQLG G T V
Sbjct: 165 LQSL---CGIPVAQISAGGNHSFVLS--------LSGVVFGWGSNSAGQLGLGDTTDRFV 213
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P VK L VS+ CG HT+ +S G V+++G G G L N D P
Sbjct: 214 PTIVKSLSGK-KTVSISCGGEHTATLSKGGTVFTFG-SGGFG-----QLGHNSLKDEHHP 266
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
L++ G K QV CG HT+++ +++S+G G G LG G+ + P
Sbjct: 267 RLVAE--LWGSKVS---QVTCGRHHTLVLVALTNRIYSFGCGMQGQLGNGEQVKQSVPLP 321
Query: 361 VLWP 364
VL P
Sbjct: 322 VLLP 325
>gi|444725178|gb|ELW65756.1| putative E3 ubiquitin-protein ligase HERC4 [Tupaia chinensis]
Length = 870
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+I V G SLA+ A ++ WG G +P + G ++
Sbjct: 11 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GIDCKKQTSPQLIKSLLGIPFMQ 68
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H L +G + WG N GQLGL D R P ++++ S
Sbjct: 69 VAAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKI 118
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
VY + CG HTA LT E +TFG G GQLGH +T + P +V EL +
Sbjct: 119 VY-ICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 169
Query: 252 YLVSVDCGLFHTSV-VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + CG HTS V S+G ++S+ GL N L + SP + GN
Sbjct: 170 -VTQIACGRQHTSAFVPSSGRIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 218
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 108/238 (45%), Gaps = 40/238 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQD 187
+V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 13 IVQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCKKQTSPQLIKSL-LG 63
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 64 IPFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 113
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 114 -RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV---- 162
Query: 308 PHGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 163 -----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 215
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 55/115 (47%), Gaps = 19/115 (16%)
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGN 306
+ +V V CG +H+ +S A +V+ WG K GLG+ + SP LI
Sbjct: 11 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI---------DCKKQTSPQLIK-- 59
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G F +QVA G AH+ ++T G ++ WGR + G LG D + P ++
Sbjct: 60 SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 110
>gi|291408963|ref|XP_002720777.1| PREDICTED: regulator of chromosome condensation (RCC1) and BTB
(POZ) domain containing protein 1 [Oryctolagus
cuniculus]
Length = 531
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ +L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMVLA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V++WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYAWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA V+
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHVM 280
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 135/340 (39%), Gaps = 53/340 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H + L + GE Y +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMVLAADGEVY--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYAW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKNNLLSPAHV 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S +L T FA
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 340 AVSWRLLSVE-HEDFLTVA----ESLRKEFDSPETADLKF 374
>gi|432906474|ref|XP_004077549.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Oryzias
latipes]
Length = 1059
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 115/271 (42%), Gaps = 43/271 (15%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P FHG V V CG H L+ ED
Sbjct: 4 WGNASYGQLGL-GGIDEEIVVEPRKCEFFHGKRVRDVGCGRRHTAFLL--------EDGT 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + ++CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKSRKKPEQVVALDAQ---IIVALSCGESHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GLG +GQLG + + VP +K L V + V CG +H+ +S G ++S
Sbjct: 104 QVFSW--GLGSDGQLGLNNFEECIRVPRNIKSLSD-VQVAQVACGYWHSLALSKGGHIFS 160
Query: 275 WGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
WG + GLG+ G +IS + G F Q+A G AH+ +T
Sbjct: 161 WGQNRYGQLGLGM----------TGQSIS-VPQHLQSLQGIPF---AQIAAGGAHSFALT 206
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++ WGR + G LG T D PA++
Sbjct: 207 LSG-AVFGWGRNKFGQLGLNDTNDRCFPALL 236
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 103/247 (41%), Gaps = 39/247 (15%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG N+ C I P +++ S +++ V G SLA+ G
Sbjct: 113 DGQLGL---NNFEEC-------IRVPRNIKSLSD------VQVAQVACGYWHSLALSKGG 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G + S P + G ++A G H AL +G
Sbjct: 157 HIFSWGQNRYGQLGL--GMTGQSISVPQHLQSLQGIPFAQIAAGGAHSFALTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P +++ V ++CG HTA LT
Sbjct: 210 ---AVFGWGRNKFGQLGLNDTNDRCFPALLKALRSQR---VIYISCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAG 270
E +TFG G GQLGH +T + P +V EL V + + CG HT + S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGNV-VTQIACGRQHTLAFTPSSG 314
Query: 271 DVWSWGM 277
+ S+G+
Sbjct: 315 KMDSFGL 321
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 132/300 (44%), Gaps = 50/300 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-----TPSPVWDFHGHT 128
I ++ G +LA+++ G ++ WG ++G L ++F P +
Sbjct: 86 IVALSCGESHTLALNDKGQVFSWG------LGSDGQLGL-NNFEECIRVPRNIKSLSDVQ 138
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQD 187
V +VACG H +AL G + SWG N GQLGLG +S P+ +++ Q
Sbjct: 139 VAQVACGYWHSLALSKGGHIF--------SWGQNRYGQLGLGMTGQSISVPQHLQSL-QG 189
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P+A ++ G H+ LT L + +G + GQLG T P +K L
Sbjct: 190 IPFA--QIAAGGAHSFALT--------LSGAVFGWGRNKFGQLGLNDTNDRCFPALLKAL 239
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILIS 304
+ ++ + CG HT+ ++ G V+++G G G L N ++P +
Sbjct: 240 -RSQRVIYISCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTNHEVNPRKVFELM 292
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
GN Q+ACG HT+ T K+ S+G G +G LGT T + +PA V P
Sbjct: 293 GNVV--------TQIACGRQHTLAFTPSSGKMDSFGLGGNGQLGTRSTCNRKSPAPVKGP 344
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 71/178 (39%), Gaps = 29/178 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHT 128
I + AGG S A+ +GA++ WG G L + P+ +
Sbjct: 190 IPFAQIAAGGAHSFALTLSGAVFGWGRNKF------GQLGLNDTNDRCFPALLKALRSQR 243
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQD 187
V+ ++CG +H AL G +++GA GQLG + P K+ E
Sbjct: 244 VIYISCGEDHTAALTKEGGV--------FTFGAGGYGQLGHNSTNHEVNPRKVFELMGN- 294
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT T D +FGLG NGQLG +T + P VK
Sbjct: 295 ---VVTQIACGRQHTLAFTPSSGKMD-------SFGLGGNGQLGTRSTCNRKSPAPVK 342
>gi|218196711|gb|EEC79138.1| hypothetical protein OsI_19792 [Oryza sativa Indica Group]
Length = 1385
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/313 (26%), Positives = 141/313 (45%), Gaps = 36/313 (11%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT 128
A + I V G + A+ +G L+ WGN +S G + VS + P V G
Sbjct: 405 ANMNIELVACGEYHTCAVTLSGDLYTWGNG-TSNSGLLGHGNEVSHWVPKRVNGPLEGIH 463
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + SAG+ +++G + G LG GDR+S P+ +E+
Sbjct: 464 VSAISCGPWHTAIVTSAGQ--------LFTFGDGSFGVLGHGDRQSLSVPREVESLKG-- 513
Query: 189 PWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V
Sbjct: 514 -LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCV 572
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
L + + + CG T ++++G V++ G P N D + P+ +
Sbjct: 573 AALVEPNF-CQIACGHCMTVALTTSGHVYTMG-------SPVYGQLGNPQADGMLPVRVE 624
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G F + +++CGA H ++T ++++WG+G +G LG G T D +P +V
Sbjct: 625 GK--LHKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRSSPTLV--- 676
Query: 365 PLTEEFKQDELNT 377
E K ++ T
Sbjct: 677 ---ESLKDKQVRT 686
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + GE Y SWG + G+LG G +PK+I+
Sbjct: 357 VQNISCGGRHATLVTKQGEIY--------SWGEESGGRLGHGVDCDVPQPKLIDALAN-- 406
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG +HT +T D+ W G +G LGHG S VP++V
Sbjct: 407 -MNIELVACGEYHTCAVTLS---GDL---YTWGNGTSNSGLLGHGNEVSHWVPKRVNGPL 459
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ +++ ++ CG +HT++V+SAG ++++G LG SL+ +++ +
Sbjct: 460 EGIHVSAISCGPWHTAIVTSAGQLFTFGDGSFGVLGHGDRQSLSVPREVESLKGLRT--- 516
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDF 355
V+ ACG HT V + K+++WG G G LG G
Sbjct: 517 ----------VRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTR 566
Query: 356 FAPAIV 361
P V
Sbjct: 567 LVPTCV 572
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 98/257 (38%), Gaps = 83/257 (32%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + ++ G + + +AG L+ +G +G F ++ S P V
Sbjct: 462 IHVSAISCGPWHTAIVTSAGQLFTFG---------DGSFGVLGHGDRQSLSVPREVESLK 512
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG GD+++RL P
Sbjct: 513 GLRTVRAACGVWHTAAVV---EVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKDTRLVP 569
Query: 179 KIIETFNQDS---------------------------------PWA-------------- 191
+ + + P A
Sbjct: 570 TCVAALVEPNFCQIACGHCMTVALTTSGHVYTMGSPVYGQLGNPQADGMLPVRVEGKLHK 629
Query: 192 --VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V E++CG++H A+LT R + +T+G G NG+LGHG T P V+ L +
Sbjct: 630 NFVEEISCGAYHVAVLTSR--------TEVYTWGKGANGRLGHGDTDDRSSPTLVESL-K 680
Query: 250 YVYLVSVDCGLFHTSVV 266
+ +V CG+ T+ +
Sbjct: 681 DKQVRTVVCGINFTAAI 697
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 16/147 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
C + G M++A+ +G ++ G+ P+ + G P V H + V ++
Sbjct: 580 FCQIACGHCMTVALTTSGHVYTMGS-PV---YGQLGNPQADGMLPVRVEGKLHKNFVEEI 635
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ HV L S E Y +WG NG+LG GD + R P ++E+ V
Sbjct: 636 SCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRSSPTLVESLKDKQ---V 684
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMC 219
V CG TA + K + + +SMC
Sbjct: 685 RTVVCGINFTAAICIHKWVSGVDQSMC 711
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 70/143 (48%), Gaps = 20/143 (13%)
Query: 227 NGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGL 283
N ++G+ G L+P+ + E + + ++ CG H ++V+ G+++SWG E G LG
Sbjct: 331 NSRVGNSGVKMDCLIPKPL-EFAVKLDVQNISCGGRHATLVTKQGEIYSWGEESGGRLGH 389
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG- 342
+ + + + DA++ + I VACG HT VT G L++WG G
Sbjct: 390 GVDCDVPQPKLIDALANMNIE-------------LVACGEYHTCAVTLSG-DLYTWGNGT 435
Query: 343 -RSGVLGTGKTIDFFAPAIVLWP 364
SG+LG G + + P V P
Sbjct: 436 SNSGLLGHGNEVSHWVPKRVNGP 458
>gi|357520081|ref|XP_003630329.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524351|gb|AET04805.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 230
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 115/236 (48%), Gaps = 35/236 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QD 187
V+ ++ G+ H VAL++ ++VC SWG +GQLG GD + RL P + F+ QD
Sbjct: 14 VLLISAGASHTVALLTG-------NVVC-SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQD 65
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ VTCG+ +T + K D+ CW G +NG+LG GTT+ + VP+++
Sbjct: 66 ----IVSVTCGADYT--VARSKSGKDVYSWGCW--GRNQNGELGLGTTKDSHVPQKILAF 117
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ + + V G H+ ++ GD+ W WG LGL + D + P ++
Sbjct: 118 -EGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGL--------GDTNDRLIPEKVNI 168
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+G V V+CG HT+ ++ G L++ G + G LG G D P V
Sbjct: 169 DG------DKIVMVSCGWRHTISISSSG-GLYTHGWSKYGQLGHGDFEDCLVPRKV 217
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+P + + AG ++A+ + WG + G P+ + F G +
Sbjct: 10 SPPHVLLISAGASHTVALLTGNVVCSWGR---GEDGQLGHGDTDDRLLPTKLSAFDGQDI 66
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYS-WGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V V CG+++ VA + G+D+ + WG N NG+LGLG + P+ I F
Sbjct: 67 VSVTCGADYTVA-----RSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQKILAFEGIR 121
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V G+ H+ +T + + +G G G LG G T L+PE+V
Sbjct: 122 ---IKMVAAGAEHSVAITE--------DGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDG 170
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +VS CG HT +SS+G +++ G K
Sbjct: 171 DKIVMVS--CGWRHTISISSSGGLYTHGWSK 199
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 77/176 (43%), Gaps = 23/176 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGA-LWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVVK 131
I SV G ++A +G ++ WG C + + E G S P + F G +
Sbjct: 66 IVSVTCGADYTVARSKSGKDVYSWG-CWGRNQNGELGLGTTKDSHVPQKILAFEGIRIKM 124
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+EH VA+ G+ Y WG G LGLGD RL P E N D
Sbjct: 125 VAAGAEHSVAITEDGD--------LYGWGWGRYGNLGLGDTNDRLIP---EKVNIDGD-K 172
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V+CG HT ++ +T G + GQLGHG + LVP +V+ L
Sbjct: 173 IVMVSCGWRHTISISS--------SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 220
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 53/118 (44%), Gaps = 16/118 (13%)
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
P +V L+S G HT + + V SWG + + L + D + P +S
Sbjct: 11 PPHVLLIS--AGASHTVALLTGNVVCSWGRGE------DGQLGHGDTDDRLLPTKLSAF- 61
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG---RGRSGVLGTGKTIDFFAPAIVL 362
QD V V CGA +TV + G ++SWG R ++G LG G T D P +L
Sbjct: 62 ----DGQDIVSVTCGADYTVARSKSGKDVYSWGCWGRNQNGELGLGTTKDSHVPQKIL 115
>gi|443715597|gb|ELU07510.1| hypothetical protein CAPTEDRAFT_122289, partial [Capitella teleta]
Length = 477
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/254 (29%), Positives = 118/254 (46%), Gaps = 38/254 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRL 176
P+ + V +VACG H + +G+ Y S+G NN+ QLGLG D E
Sbjct: 68 PTRIKSLKAEKVHQVACGRSHTLLATESGKIY--------SFGCNNDRQLGLGLDDEKVC 119
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
P +I+ AV ++ G +H+ +LT + + +G GE GQLG G +
Sbjct: 120 SPTVIKGLESH---AVKMLSAGMYHSCVLTDK--------GSVYLWGGGEEGQLGFG--E 166
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR-NEAG 295
E + L +V + CG +HT++V++ G + ++G L R ++ G
Sbjct: 167 DVTKHETPERLDVDDEVVCIACGYYHTALVTAGGKLLTFGETD------EGKLGRGSDTG 220
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT-ID 354
D P ++ G H V VACG AHTV +T G+ ++++G G SG LG G +
Sbjct: 221 DNCLPKVVDGIEGH------VVSVACGGAHTVAIT--GWLVYTFGNGSSGQLGHGNMLLQ 272
Query: 355 FFAPAIVLWPPLTE 368
P ++W T+
Sbjct: 273 ADTPHKIVWQKPTK 286
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 107/258 (41%), Gaps = 47/258 (18%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSPVWDFHGHTVVKVAC 134
+ AG S + + G++++WG EG GF + +P VV +AC
Sbjct: 135 LSAGMYHSCVLTDKGSVYLWG------GGEEGQLGFGEDVTKHETPERLDVDDEVVCIAC 188
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVY 193
G H ALV+AG ++G + G+LG G D PK+++ V
Sbjct: 189 GYYHT-ALVTAGGKL-------LTFGETDEGKLGRGSDTGDNCLPKVVDGIEGH----VV 236
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYV 251
V CG HT +T + +TFG G +GQLGHG Q+ + V + P V
Sbjct: 237 SVACGGAHTVAITGW---------LVYTFGNGSSGQLGHGNMLLQADTPHKIVWQKPTKV 287
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
S CG HT++V+ G +W+ G G +L + P H
Sbjct: 288 R--SASCGENHTALVTDRGQLWTCGD----GRHGKLALGEENFANQFKPC-------HSV 334
Query: 312 KFQDPV--QVACGAAHTV 327
+F V QV+CG HT+
Sbjct: 335 RFSKFVVEQVSCGGCHTL 352
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 77/166 (46%), Gaps = 28/166 (16%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++CG HT+LL R +TFG GQLG G T+ P ++K L +
Sbjct: 27 VLHISCGDEHTSLLAGDGR--------VFTFGDNAWGQLGLGHTKPVTKPTRIKSL-KAE 77
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG HT + + +G ++S+G + GLGL + SP +I G
Sbjct: 78 KVHQVACGRSHTLLATESGKIYSFGCNNDRQLGLGL---------DDEKVCSPTVIKGLE 128
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
H K ++ G H+ ++TD G ++ WG G G LG G+ +
Sbjct: 129 SHAVKM-----LSAGMYHSCVLTDKG-SVYLWGGGEEGQLGFGEDV 168
>gi|410918052|ref|XP_003972500.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Takifugu rubripes]
Length = 1031
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 114/262 (43%), Gaps = 37/262 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL----VSSFTPSPVWDFHGHT 128
+I V G +A+ G L+ WG +T G L S P P+ G
Sbjct: 137 RIAQVMCGNQHCIALSKDGQLFTWGQ------NTSGQLGLGKGEPSKLFPQPLKSLAGIP 190
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ K+ G +H AL +G + WG N GQLGL D + R P I+
Sbjct: 191 LAKITAGGDHSFALSLSG--------AVFGWGKNKAGQLGLNDIQDRAVPCHIKFLRSQK 242
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V ++CG HTA LT + +TFG G GQLGHG+T + L+P +V EL
Sbjct: 243 ---VVHISCGEEHTAALTK--------DGGLFTFGDGSWGQLGHGSTANELLPRRVLEL- 290
Query: 249 QYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + CG HT + S+G V+++G G L+ +++ + +SG+
Sbjct: 291 MGTEVSQITCGRHHTLAFAPSSGGVYAFGCNSH-GQLGTGVLSADKSPYPLKTSFLSGS- 348
Query: 308 PHGPKFQDPVQVACGAAHTVLV 329
HG ++ CG H+ L+
Sbjct: 349 IHG----TVTKITCGGDHSFLL 366
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 112/252 (44%), Gaps = 40/252 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
TP V + V+CG H +A+ G+ + +WGA GQLGLG E+
Sbjct: 72 ITPEFVGALDTQKITLVSCGQAHSLAVNEQGQVF--------AWGAGEEGQLGLGTTETA 123
Query: 176 LR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
+R P++I+ + +V CG+ H L+ + +T+G +GQLG G
Sbjct: 124 VRIPRLIKRLCDHR---IAQVMCGNQHCIALSK--------DGQLFTWGQNTSGQLGLGK 172
Query: 235 TQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ S L P+ +K L + L + G H+ +S +G V+ WG K L N+
Sbjct: 173 GEPSKLFPQPLKSLAG-IPLAKITAGGDHSFALSLSGAVFGWGKNKA------GQLGLND 225
Query: 294 AGDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
D P I KF Q V ++CG HT +T DG L+++G G G LG G
Sbjct: 226 IQDRAVPCHI--------KFLRSQKVVHISCGEEHTAALTKDG-GLFTFGDGSWGQLGHG 276
Query: 351 KTIDFFAPAIVL 362
T + P VL
Sbjct: 277 STANELLPRRVL 288
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 126/291 (43%), Gaps = 58/291 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHT 128
KI V G SLA++ G ++ WG + EG L ++ T P + H
Sbjct: 84 KITLVSCGQAHSLAVNEQGQVFAWG------AGEEGQLGLGTTETAVRIPRLIKRLCDHR 137
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQD 187
+ +V CG++H +AL G+ ++WG N +GQLGLG E S+L P+ +++
Sbjct: 138 IAQVMCGNQHCIALSKDGQ--------LFTWGQNTSGQLGLGKGEPSKLFPQPLKSL-AG 188
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A ++T G H+ L+ L + +G + GQLG Q VP +K L
Sbjct: 189 IPLA--KITAGGDHSFALS--------LSGAVFGWGKNKAGQLGLNDIQDRAVPCHIKFL 238
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVW-----SWGMEKGLGLCPNASLTRNE---AGDAIS 299
+ +V + CG HT+ ++ G ++ SWG + G G N L R G +S
Sbjct: 239 -RSQKVVHISCGEEHTAALTKDGGLFTFGDGSWG-QLGHGSTANELLPRRVLELMGTEVS 296
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
Q+ CG HT+ ++++G G LGTG
Sbjct: 297 ------------------QITCGRHHTLAFAPSSGGVYAFGCNSHGQLGTG 329
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/197 (32%), Positives = 89/197 (45%), Gaps = 32/197 (16%)
Query: 159 WGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG +GQLG+G +R P+ F + + E+ CG H+ L H +
Sbjct: 4 WGKAKDGQLGIGVERNPMFEPRNCNVF---TGRGLKEIVCGGQHSVFLLH--------DG 52
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G GQLGH + + PE V L Q + LVS CG H+ V+ G V++WG
Sbjct: 53 SVYTCGSNSCGQLGH--NKPGITPEFVGALDTQKITLVS--CGQAHSLAVNEQGQVFAWG 108
Query: 277 M--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
E LGL + R P LI H QV CG H + ++ DG
Sbjct: 109 AGEEGQLGLGTTETAVR-------IPRLIKRLCDH-----RIAQVMCGNQHCIALSKDG- 155
Query: 335 KLWSWGRGRSGVLGTGK 351
+L++WG+ SG LG GK
Sbjct: 156 QLFTWGQNTSGQLGLGK 172
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 74/177 (41%), Gaps = 23/177 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A I + + AGG S A+ +GA++ WG + G + P + V
Sbjct: 187 AGIPLAKITAGGDHSFALSLSGAVFGWGK---NKAGQLGLNDIQDRAVPCHIKFLRSQKV 243
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDS 188
V ++CG EH AL G +++G + GQLG G + L P +++E +
Sbjct: 244 VHISCGEEHTAALTKDGG--------LFTFGDGSWGQLGHGSTANELLPRRVLELMGTE- 294
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++TCG HT P+ + FG +GQLG G + P +K
Sbjct: 295 ---VSQITCGRHHTLAFA----PSS---GGVYAFGCNSHGQLGTGVLSADKSPYPLK 341
>gi|357470133|ref|XP_003605351.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
gi|355506406|gb|AES87548.1| Serine/threonine protein kinase Nek9 [Medicago truncatula]
Length = 1096
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/296 (29%), Positives = 133/296 (44%), Gaps = 42/296 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF-HGHTVVKVACG 135
V G + A+ + WG+ + G + +S + P V F G VV VACG
Sbjct: 148 VACGEFHTSAVSKCDNFFTWGD-GTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVACG 206
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S H S G+ +++G G LG GD+ES + PK ++ S +V
Sbjct: 207 SWHSALATSNGK--------LFTFGDGTFGVLGHGDQESVMYPKEVQLL---SGLKTVKV 255
Query: 196 TCGSFHTALLTHRKRPNDMLES--MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +HTA + + S +T+G G+ +LGHG L P +V L +Y +
Sbjct: 256 ACGVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRVSPLIEYNFQ 315
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG-MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ CG T ++++G V++ G E G PNA AG P L+
Sbjct: 316 -QIACGHTMTVALTTSGHVFTMGSTENGQLGNPNA------AGKV--PTLV--------- 357
Query: 313 FQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
QD + +++CGA H VT +L++WG+G +G LG G T D +P +VL
Sbjct: 358 -QDKLLGEFIEEISCGAHHVAAVTSRS-ELYTWGKGSNGRLGHGDTDDRKSPTLVL 411
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/308 (25%), Positives = 131/308 (42%), Gaps = 55/308 (17%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
GG + I++ G +++WG + +G S TP + V + G+ H+
Sbjct: 49 GGSEADDIESKGDVYIWG-----EVFADGFPSKTDVLTPRLLESTVVLDVRDIVSGTHHL 103
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE--VTC 197
+ G+ + +WG + G+LG G + +P ++E P V V C
Sbjct: 104 AIVSREGKVF--------TWGEESGGRLGHGIDKDFGKPHLVEF-----PDVVTLDIVAC 150
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
G FHT+ ++ + ++ W G G LGHG S +P+ V + +VSV
Sbjct: 151 GEFHTSAVS---KCDNFF---TWGDGTHNVGLLGHGNEISHWIPKSVNGFLDGLRVVSVA 204
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI---LISGNGPHGPKFQ 314
CG +H+++ +S G ++++G + G+ L + + P L+SG
Sbjct: 205 CGSWHSALATSNGKLFTFG-DGTFGV-----LGHGDQESVMYPKEVQLLSG--------L 250
Query: 315 DPVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
V+VACG HT + + +KL++WG G LG G + P V P
Sbjct: 251 KTVKVACGVWHTAAIIEVAFQSGSNASSWKLFTWGDGDKFRLGHGNKDMYLKPTRV--SP 308
Query: 366 LTE-EFKQ 372
L E F+Q
Sbjct: 309 LIEYNFQQ 316
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 28/155 (18%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG----LGD 171
P+ V + ++ACG VAL ++G + + G+ NGQLG G
Sbjct: 301 LKPTRVSPLIEYNFQQIACGHTMTVALTTSGHVF--------TMGSTENGQLGNPNAAGK 352
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+ ++ K++ F + E++CG+ H A +T R S +T+G G NG+LG
Sbjct: 353 VPTLVQDKLLGEF-------IEEISCGAHHVAAVTSR--------SELYTWGKGSNGRLG 397
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
HG T P V L +L ++ CG TS V
Sbjct: 398 HGDTDDRKSPTLVLALKDR-HLKNISCGSNFTSCV 431
>gi|427780149|gb|JAA55526.1| Putative hect e3 ubiquitin ligase culex quinquefasciatus hect e3
ubiquitin ligase [Rhipicephalus pulchellus]
Length = 1175
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 147/348 (42%), Gaps = 47/348 (13%)
Query: 29 CCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAID 88
C L + S+ C F +G S+ + + +I +V G SLA+
Sbjct: 92 CGHKHTLVLLANGSVYSCGANDFGQLGQDRSMRKLEQVAALSAHEIRAVACGEAHSLALS 151
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+AG ++ WG C + G S P + +V++ACG+ H +AL + GE
Sbjct: 152 DAGQVFSWG-CN-RNGQLGCGTEEESRLRPKVIKKLATLHIVQIACGAVHCLALANNGEL 209
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ SWG N +GQLGLG R+S ++ + + V CG+ H+ LT
Sbjct: 210 F--------SWGGNASGQLGLG-RDSTGNERLPRRVSHLVGVPLALVACGAMHSVGLT-- 258
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
P+ + + +G GQLG + L P +K L + + V CG HT+ +++
Sbjct: 259 --PSGTV----FVWGRNSCGQLGLSDQRDRLHPTVLKPL-RSQRIKHVCCGENHTAALTA 311
Query: 269 AGDVWSWGM----EKGLGLCPNASLTRNEA---GDAISPILISGNGPHGPKFQDPVQVAC 321
G V+++G + G G+ N ++ R G AIS Q++C
Sbjct: 312 DGGVFTFGAGTYGQLGHGVKVNEAVPRRVVELMGTAIS------------------QLSC 353
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV--LWPPLT 367
G HTV +L+ +G G SG LG G P V LW +T
Sbjct: 354 GRCHTVAYAPQSGRLYIFGLGMSGQLGNGTLESSALPVTVPGLWHGVT 401
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/286 (30%), Positives = 126/286 (44%), Gaps = 40/286 (13%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTP----SPVWDFHGHTVVKVACGSEHVVALVSAGET 148
L+ WG P + G V + TP V F V +VACG +H + L++ G
Sbjct: 47 LYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTRAVREVACGHKHTLVLLANGSV 106
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y S GAN+ GQLG DR R +E S + V CG H+ L+
Sbjct: 107 Y--------SCGANDFGQLG-QDRSMR----KLEQVAALSAHEIRAVACGEAHSLALS-- 151
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
D + W G NGQLG GT +S L P+ +K+L +++V + CG H ++
Sbjct: 152 ----DAGQVFSW--GCNRNGQLGCGTEEESRLRPKVIKKLAT-LHIVQIACGAVHCLALA 204
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHT 326
+ G+++SWG L L R+ G+ P +S P+ VACGA H+
Sbjct: 205 NNGELFSWGGNASGQL----GLGRDSTGNERLPRRVSH------LVGVPLALVACGAMHS 254
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 372
V +T G ++ WGR G LG D P VL P ++ K
Sbjct: 255 VGLTPSG-TVFVWGRNSCGQLGLSDQRDRLHPT-VLKPLRSQRIKH 298
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 98/211 (46%), Gaps = 38/211 (18%)
Query: 151 GEDLVCYSWGANNNGQLGLG------DRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTA 203
G ++ YSWG NG+LGL D E+ + +P+ + F AV EV CG HT
Sbjct: 42 GAPMLLYSWGLGPNGELGLTQGKDGVDTETPVSQPERVRRFGTR---AVREVACGHKHTL 98
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+L + ++ G + GQLG + L EQV L + + +V CG H+
Sbjct: 99 VL--------LANGSVYSCGANDFGQLGQDRSMRKL--EQVAALSAH-EIRAVACGEAHS 147
Query: 264 SVVSSAGDVWSWGMEKGLGL---CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+S AG V+SWG + L S R + ++ + I VQ+A
Sbjct: 148 LALSDAGQVFSWGCNRNGQLGCGTEEESRLRPKVIKKLATLHI-------------VQIA 194
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
CGA H + + ++G +L+SWG SG LG G+
Sbjct: 195 CGAVHCLALANNG-ELFSWGGNASGQLGLGR 224
>gi|449481391|ref|XP_004156169.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 152/348 (43%), Gaps = 72/348 (20%)
Query: 51 FLTIGAPD--SLEDDSKTNHKAPIKIC--------SVKAGGMMSLAI----DNAGAL--- 93
T GA D L D ++ K P K+ SV G + AI +N G L
Sbjct: 81 LFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTR 140
Query: 94 --WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
W+WG + + +FTP + + +V+CG+ HVVAL G+
Sbjct: 141 RLWIWGQ----NQGSNFPRLFWGAFTPQTI-------IRQVSCGAVHVVALSDDGQLQ-- 187
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQ---DSP--WAVYEVTCGSFHTALL 205
+WG N GQLG G L+ +II F + ++P + +V+CG +H+A +
Sbjct: 188 ------AWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAI 241
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSA---LVPEQVKELPQYVYLVSVDCGLFH 262
+ +T+GLG GQLGH + QSA L+P +V L + + + CG H
Sbjct: 242 SENGE--------VYTWGLGSMGQLGHCSLQSADKELIPRRVVALDG-ICVKDIACGGVH 292
Query: 263 TSVVSSAGDVWSWGMEKGLGLC--PNASLTRNEAGDAIS-----PILISGNGPHGPKFQD 315
T ++ G +++WG + L P AGD+ + P+++ +G
Sbjct: 293 TCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQ------ 346
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
VACG +HT++ T DG ++ WG G K+ + P+ V W
Sbjct: 347 --HVACGHSHTLVSTKDG-RIHGWGYNSYGQAANEKSTYAWYPSPVDW 391
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 104/263 (39%), Gaps = 73/263 (27%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ +ACG EH A+ S G + +WGAN+ GQLG G E PK + NQ
Sbjct: 63 LDIACGREHTAAVASDGSLF--------TWGANDFGQLGDGTEEKSKLPKKV---NQLQG 111
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLES----------------MCW------------- 220
V V+CG+ TA + + + L + + W
Sbjct: 112 EFVKSVSCGAHCTAAIAEPRENDGTLSTRRLWIWGQNQGSNFPRLFWGAFTPQTIIRQVS 171
Query: 221 ----------------TFGLGENGQLGHGTTQSALVPEQV--------KELPQYVYLVSV 256
+G E GQLG G T L ++ E P+ V + V
Sbjct: 172 CGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKV 231
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
CG +H++ +S G+V++WG+ +G + SL A + P + G +D
Sbjct: 232 SCGEYHSAAISENGEVYTWGLGS-MGQLGHCSL--QSADKELIPRRVV--ALDGICVKD- 285
Query: 317 VQVACGAAHTVLVTDDGYKLWSW 339
+ACG HT +T +G L++W
Sbjct: 286 --IACGGVHTCAITQNG-SLYAW 305
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR------PKIIETFNQ-DSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ G ++ +LR P + + +S W ++ CG HTA +
Sbjct: 22 YVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINSRW--LDIACGREHTAAVAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G + GQLG GT + + +P++V +L Q ++ SV CG T+ ++
Sbjct: 78 ------DGSLFTWGANDFGQLGDGTEEKSKLPKKVNQL-QGEFVKSVSCGAHCTAAIAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G ++ R G A +P I QV+
Sbjct: 131 RENDGTLSTRRLWIWGQNQG------SNFPRLFWG-AFTPQTI------------IRQVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H V ++DDG +L +WG G LG G T + A ++
Sbjct: 172 CGAVHVVALSDDG-QLQAWGYNEYGQLGRGVTSEGLQGARII 212
>gi|313221384|emb|CBY32137.1| unnamed protein product [Oikopleura dioica]
Length = 1586
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 128/288 (44%), Gaps = 65/288 (22%)
Query: 117 TPSPVWDFHGHTVVKVA--CGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
PS V G V ++ GS+ H +A+ +GE ++WG + G+LG G+ E
Sbjct: 805 VPSLVSALQGFIVTHLSSSVGSDGHTLAITESGE--------LFTWGDGDYGKLGHGNSE 856
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ RP+++ET ++ V + CG HTA++T +TFG G+ G+LGHG
Sbjct: 857 RQRRPRLVETLVGET---VVDGCCGYKHTAVVT--------ATGYLYTFGYGDYGRLGHG 905
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG-DVWSWGM----EKGLG-----L 283
T S P V + +VSV CGL HT +S G VW++G + GLG
Sbjct: 906 NTTSKKTPTLVHDCQN---IVSVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQ 962
Query: 284 CPNASLTRNEAGD-------------AIS-PILISG----NGPHGP-------KFQD--- 315
PN G AI+ + +SG NG GP K +
Sbjct: 963 SPNKIAALENVGIKSVHCGHQWSVFLAINGDVYVSGQDAFNGIGGPGQTVIPTKLETIKK 1022
Query: 316 -PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q++CGA +T+ + +DG +WSWG G +G G P + L
Sbjct: 1023 RVFQISCGAEYTLALDEDG-NVWSWGNNSDGQVGCGHFNKVHEPLLTL 1069
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 84/241 (34%), Gaps = 71/241 (29%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+LAI +G L+ WG+ D G + P V G TVV CG +H +
Sbjct: 830 TLAITESGELFTWGDG---DYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVT 886
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G Y++G + G+LG G+ S+ P ++ + V+CG HT
Sbjct: 887 ATG--------YLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQN-----IVSVSCGLNHTL 933
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY------------- 250
L+ W FG G+ G+LG G T + P ++ L
Sbjct: 934 ALSRDGM-------TVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSV 986
Query: 251 -------VYL----------------------------VSVDCGLFHTSVVSSAGDVWSW 275
VY+ + CG +T + G+VWSW
Sbjct: 987 FLAINGDVYVSGQDAFNGIGGPGQTVIPTKLETIKKRVFQISCGAEYTLALDEDGNVWSW 1046
Query: 276 G 276
G
Sbjct: 1047 G 1047
>gi|115461450|ref|NP_001054325.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|38345822|emb|CAD41927.2| OSJNBa0070M12.5 [Oryza sativa Japonica Group]
gi|113565896|dbj|BAF16239.1| Os04g0686200 [Oryza sativa Japonica Group]
gi|222629813|gb|EEE61945.1| hypothetical protein OsJ_16701 [Oryza sativa Japonica Group]
Length = 1057
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 87/297 (29%), Positives = 134/297 (45%), Gaps = 34/297 (11%)
Query: 72 IKICSVKA---GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGH 127
+ IC+V+ G + AI G L+ WG+ ++ G S VS + P V G
Sbjct: 310 LSICNVETIACGEFHTCAITATGDLYTWGDG-THNAGLLGHGSNVSHWIPKRVSGPLEGL 368
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V V+CG+ H + S+G+ Y++G G LG G+RE+ PK +E+
Sbjct: 369 QVSAVSCGTWHTALITSSGK--------LYTFGDGTFGVLGHGNRETISYPKEVESLKG- 419
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLES-MCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V+CG +HTA + S +T+G G+ +LGHG S L P V
Sbjct: 420 --LRTISVSCGVWHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCVPS 477
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILIS 304
L Y + +V CG T ++++G +++ G + LG N D P L+
Sbjct: 478 LIDYNFHKAV-CGHTLTIGLTTSGHIFTAGSSVYGQLG---------NPNNDGRYPRLVE 527
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G V+VACGA H ++T G ++++WG+G +G LG G D P V
Sbjct: 528 EKLGGG----GVVEVACGAYHVAVLTQSG-EVYTWGKGANGRLGHGDIADRKTPTFV 579
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/286 (24%), Positives = 119/286 (41%), Gaps = 43/286 (15%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFT-------PSPVWDFHGHTVVKVACGSEHVVALV 143
G +++WG + +G S S T P P+ V VACG +H +
Sbjct: 218 GDVYVWGEVMCDTTCRQGSDSNAYSATAATDILVPKPLESNVMLDVSYVACGVKHAALVT 277
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
E + +WG +G+LG G S +P+++E+ S V + CG FHT
Sbjct: 278 RQAEVF--------TWGEECSGRLGHGAGTSIFQPRLVESL---SICNVETIACGEFHTC 326
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+T D+ W G G LGHG+ S +P++V + + + +V CG +HT
Sbjct: 327 AIT---ATGDLY---TWGDGTHNAGLLGHGSNVSHWIPKRVSGPLEGLQVSAVSCGTWHT 380
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++++S+G ++++G + G+ + + + + K + V+CG
Sbjct: 381 ALITSSGKLYTFG-DGTFGVLGHGNRETISYPKEVESL----------KGLRTISVSCGV 429
Query: 324 AHTVLVTD--------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT V + KL++WG G LG G P V
Sbjct: 430 WHTAAVVEVIMAQSNTSSGKLFTWGDGDKYRLGHGDRSSKLKPTCV 475
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 45/94 (47%), Gaps = 11/94 (11%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G VV+VACG+ HV L +GE Y +WG NG+LG GD R P +E
Sbjct: 532 GGGVVEVACGAYHVAVLTQSGEVY--------TWGKGANGRLGHGDIADRKTPTFVEALR 583
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
S V + CGS TA + K + M +S C
Sbjct: 584 DRS---VKRIACGSGFTAAICQHKSVSGMEQSQC 614
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGME--KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG+ H ++V+ +V++WG E LG S+ + +++S +
Sbjct: 266 VACGVKHAALVTRQAEVFTWGEECSGRLGHGAGTSIFQPRLVESLSICNVE--------- 316
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
+ACG HT +T G L++WG G +G+LG G + + P V P
Sbjct: 317 ----TIACGEFHTCAITATG-DLYTWGDGTHNAGLLGHGSNVSHWIPKRVSGP 364
Score = 40.4 bits (93), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 42/100 (42%), Gaps = 14/100 (14%)
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK------FQDPVQVAC 321
S GDV+ WG C S + + A + IL+ PK D VAC
Sbjct: 216 SFGDVYVWGEVMCDTTCRQGSDSNAYSATAATDILV-------PKPLESNVMLDVSYVAC 268
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G H LVT ++++WG SG LG G F P +V
Sbjct: 269 GVKHAALVTRQA-EVFTWGEECSGRLGHGAGTSIFQPRLV 307
>gi|444729790|gb|ELW70194.1| putative E3 ubiquitin-protein ligase HERC6 [Tupaia chinensis]
Length = 1378
Score = 86.3 bits (212), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 97/199 (48%), Gaps = 29/199 (14%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLV--SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
G L+ WG +S + G + SS TP V G +V+++ G H +AL G
Sbjct: 913 GELFAWGQ----NSHGQLGLGRIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNV 968
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y SWG N+ GQLGLG ES+ P ++ + V + CG HTALLT
Sbjct: 969 Y--------SWGKNDFGQLGLGHTESKDSPSLLRALDSQK---VDFLACGGSHTALLTQ- 1016
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVS 267
+ + +TFG G+ GQLGH +T+ L P V EL + + CG +HT + VS
Sbjct: 1017 -------DGLVFTFGAGKYGQLGHSSTRDELRPCLVTELLGN-RVTQIACGRWHTLAYVS 1068
Query: 268 SAGDVWSWGMEKG--LGLC 284
G V+++G K LG C
Sbjct: 1069 ELGKVFAFGSGKNGQLGNC 1087
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVW 122
K A IKI V G SLA+ G ++ WG +S + G + S +P V
Sbjct: 143 KIKALAGIKIIQVSCGYYHSLALSEDGQVFSWGK----NSHGQLGLGKEVPSQTSPQRVR 198
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-GDRESRLRPKII 181
G + +VA G H AL +G + + WG+N+ GQL L G + R K +
Sbjct: 199 SLEGIPLAQVAAGGAHSFALSLSGTS--------FGWGSNSAGQLALSGTKAPVQRYKPL 250
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+ VY ++CGS HTA+LT +TFG +GQLGH Q P
Sbjct: 251 SVGALKTLGVVY-ISCGSEHTAVLTQ--------NGAVYTFGANSSGQLGHSAEQRG--P 299
Query: 242 EQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
+ V+ + V +DCG +HT + V + G V S+G G N++ + +A
Sbjct: 300 QCVERIDGLV--SQIDCGSYHTLAYVYTTGQVVSFG--HGPSCTSNSTHSETVTDNADIS 355
Query: 301 ILISGN 306
LIS +
Sbjct: 356 CLISAD 361
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 108/236 (45%), Gaps = 31/236 (13%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RE 173
S P + F V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 85 SSKPEQIQAFETLRVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKE 136
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P+ I+ + + +V+CG +H+ L+ + +++G +GQLG G
Sbjct: 137 RSFTPQKIKAL---AGIKIIQVSCGYYHSLALSE--------DGQVFSWGKNSHGQLGLG 185
Query: 234 T-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
S P++V+ L + + L V G H+ +S +G + WG L + +
Sbjct: 186 KEVPSQTSPQRVRSL-EGIPLAQVAAGGAHSFALSLSGTSFGWGSNSAGQLALSGTKAPV 244
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ +S + G V ++CG+ HT ++T +G ++++G SG LG
Sbjct: 245 QRYKPLSVGALKTLG--------VVYISCGSEHTAVLTQNG-AVYTFGANSSGQLG 291
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 32/198 (16%)
Query: 157 YSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
++WG N++GQLGLG S P+I+E + + +++ G H+ L+ +
Sbjct: 916 FAWGQNSHGQLGLGRIFPSSPTPQIVEHL---AGVPLVQISAGEAHSMALS--------M 964
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+++G + GQLG G T+S P ++ L Q V ++ CG HT++++ G V++
Sbjct: 965 TGNVYSWGKNDFGQLGLGHTESKDSPSLLRALDSQKVDFLA--CGGSHTALLTQDGLVFT 1022
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILIS---GNGPHGPKFQDPVQVACGAAHTVLVTD 331
+G K L + D + P L++ GN Q+ACG HT+
Sbjct: 1023 FGAGK------YGQLGHSSTRDELRPCLVTELLGN--------RVTQIACGRWHTLAYVS 1068
Query: 332 DGYKLWSWGRGRSGVLGT 349
+ K++++G G++G LG
Sbjct: 1069 ELGKVFAFGSGKNGQLGN 1086
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 86/188 (45%), Gaps = 23/188 (12%)
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLT-----HRKRPNDMLESMC---WTFGLGENGQLGHG 233
E F ++S VYE H +L H+ + ++ + +C + +G +GQLG G
Sbjct: 873 EQFEKNS---VYEQEYHRSHPTILMFWKAFHKLKLDEKKKFLCGELFAWGQNSHGQLGLG 929
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ Q+ E V LV + G H+ +S G+V+SWG + G L E
Sbjct: 930 RIFPSSPTPQIVEHLAGVPLVQISAGEAHSMALSMTGNVYSWG-KNDFG---QLGLGHTE 985
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ D SP L+ F +ACG +HT L+T DG ++++G G+ G LG T
Sbjct: 986 SKD--SPSLLRALDSQKVDF-----LACGGSHTALLTQDGL-VFTFGAGKYGQLGHSSTR 1037
Query: 354 DFFAPAIV 361
D P +V
Sbjct: 1038 DELRPCLV 1045
>gi|405345706|ref|ZP_11022499.1| RCC1 repeat domain protein [Chondromyces apiculatus DSM 436]
gi|397093755|gb|EJJ24452.1| RCC1 repeat domain protein [Myxococcus sp. (contaminant ex DSM
436)]
Length = 747
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 84/312 (26%), Positives = 131/312 (41%), Gaps = 57/312 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D ++T+ P+++ S+ G SLA+ + G +W WG L D +T
Sbjct: 480 LGDGTRTDRSTPVQVPGLTGVTSIATGDYHSLALRSNGTVWGWGFNRYGQLGDGTT---- 535
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
V P V +V +A G H +AL S D +++G N +GQLG G
Sbjct: 536 --VDRTQPVQVSGLT--NIVSIAAGGGHSLALRS--------DGTVWAFGYNFDGQLGNG 583
Query: 171 DRESRLRP-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
R + P + + N V + G ++ L + W +G +GQ
Sbjct: 584 TRTWTILPVQAVGLGN------VVSLAAGKMYSLAL--------RADGTVWAWGYNASGQ 629
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GTTQ + VP QV L + S+ G +H+ + S G VW+WG L
Sbjct: 630 LGVGTTQGSAVPLQVSGLSA---ITSITAGTYHSLALRSDGWVWAWGFNF------EGQL 680
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ + ++P L+ + + G H++ V DG LW+WG G LGT
Sbjct: 681 GNGTSDNRLTPGLV-------VSMSNATAIFAGDLHSLAVRADG-TLWAWGLNSHGQLGT 732
Query: 350 GKTIDFFAPAIV 361
G T++ + P V
Sbjct: 733 GDTVEAWFPVQV 744
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 86/334 (25%), Positives = 132/334 (39%), Gaps = 75/334 (22%)
Query: 60 LEDDSKTNHKAPIKIC-----SVKAGGMMSLAIDNAGALWMWGN---------------C 99
L D + P+ I +V AG SLA+ GA+W WG+
Sbjct: 282 LGDGTTVQRTLPVLIGLTETRTVVAGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAV 341
Query: 100 PLPDSSTEGGFSLVSSFTPS-------PVWDFH-------GHTVVKVACGSEHVVALV-- 143
PL T GG +LV+ F S W + G T + V L
Sbjct: 342 PLHAGMT-GGVTLVAGFRHSVALGADGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLALG 400
Query: 144 ----SAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
++G+ + G + ++WG NN GQLG G +++ P + + V+
Sbjct: 401 RADATSGQLHTVMLGANGRLWAWGDNNQGQLGNGTQQNSSLPLPVNLT------GITSVS 454
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G HTA L L+ W++G + GQLG GT P QV P + S+
Sbjct: 455 SGHRHTAAL--------RLDGTVWSWGTNQYGQLGDGTRTDRSTPVQV---PGLTGVTSI 503
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
G +H+ + S G VW WG + L ++ R + P+ +SG +
Sbjct: 504 ATGDYHSLALRSNGTVWGWGFNRYGQLGDGTTVDRTQ------PVQVSG-------LTNI 550
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
V +A G H++ + DG +W++G G LG G
Sbjct: 551 VSIAAGGGHSLALRSDG-TVWAFGYNFDGQLGNG 583
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/306 (27%), Positives = 123/306 (40%), Gaps = 51/306 (16%)
Query: 60 LEDDSKTNHKAPIKICSVK-------AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D + AP+++ + +G + ++ + G LW WG+ + G +
Sbjct: 380 LGDTTFQPRMAPVQVTGLALGRADATSGQLHTVMLGANGRLWAWGDN---NQGQLGNGTQ 436
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+S P PV + G + V+ G H AL D +SWG N GQLG G R
Sbjct: 437 QNSSLPLPV-NLTG--ITSVSSGHRHTAALR--------LDGTVWSWGTNQYGQLGDGTR 485
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R P + V + G +H+ L R N W +G GQLG
Sbjct: 486 TDRSTPVQVPGLT-----GVTSIATGDYHSLAL----RSN----GTVWGWGFNRYGQLGD 532
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT P QV L +VS+ G H+ + S G VW++G G N + T
Sbjct: 533 GTTVDRTQPVQVSGLTN---IVSIAAGGGHSLALRSDGTVWAFGYNFD-GQLGNGTRTWT 588
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
I P+ G G + V +A G +++ + DG +W+WG SG LG G T
Sbjct: 589 -----ILPVQAVGLG-------NVVSLAAGKMYSLALRADG-TVWAWGYNASGQLGVGTT 635
Query: 353 IDFFAP 358
P
Sbjct: 636 QGSAVP 641
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 76/312 (24%), Positives = 122/312 (39%), Gaps = 56/312 (17%)
Query: 60 LEDDSKTNHKAPI-----KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
L + ++ N P+ I SV +G + A+ G +W WG G +
Sbjct: 431 LGNGTQQNSSLPLPVNLTGITSVSSGHRHTAALRLDGTVWSWGTNQY---GQLGDGTRTD 487
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
TP V G V +A G H +AL S G + WG N GQLG G
Sbjct: 488 RSTPVQVPGLTG--VTSIATGDYHSLALRSNG--------TVWGWGFNRYGQLGDGTTVD 537
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R +P + + + G H+ L + W FG +GQLG+GT
Sbjct: 538 RTQPVQVSGLTN-----IVSIAAGGGHSLALRS--------DGTVWAFGYNFDGQLGNGT 584
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLT 290
++P Q L +VS+ G ++ + + G VW+WG G+G +++
Sbjct: 585 RTWTILPVQAVGLGN---VVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQGSAV- 640
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P+ +SG + G H++ + DG+ +W+WG G LG G
Sbjct: 641 ---------PLQVSG-------LSAITSITAGTYHSLALRSDGW-VWAWGFNFEGQLGNG 683
Query: 351 KTIDFFAPAIVL 362
+ + P +V+
Sbjct: 684 TSDNRLTPGLVV 695
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 97/232 (41%), Gaps = 38/232 (16%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V++A G H +A+ S G ++WG N GQLG G + + P +
Sbjct: 53 VRLAVGQYHSLAVHSEG--------TVFAWGFNRLGQLGDGTTQDKAAPVQVAGVA---- 100
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ V G ++ L W +G +GQLG GT P +V L Q
Sbjct: 101 -SAVSVAAGDQYSLALDENGD--------VWAWGDNASGQLGDGTLTPRAQPRRVSGLTQ 151
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V L S G H + + G VW+WG + L +A+LTR+ PI +
Sbjct: 152 GVSLAS---GFAHAVALRADGTVWAWGDNRSNQLG-SATLTRSPV-----PIPV------ 196
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P D V V G + ++ + DG +W+WG R G LG G T+ AP V
Sbjct: 197 -PGLSDIVAVVAGGSSSLALRADG-TVWAWGDNRYGQLGDGTTVRRAAPVRV 246
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 82/306 (26%), Positives = 115/306 (37%), Gaps = 52/306 (16%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + AP+++ SV AG SLA+D G +W WG+ S G +L
Sbjct: 82 LGDGTTQDKAAPVQVAGVASAVSVAAGDQYSLALDENGDVWAWGDNA---SGQLGDGTLT 138
Query: 114 SSFTPSPVWDFHGHTV-VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
P V G T V +A G H VAL + D ++WG N + QLG
Sbjct: 139 PRAQPRRV---SGLTQGVSLASGFAHAVALRA--------DGTVWAWGDNRSNQLGSATL 187
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
P + + V V GS AL + W +G GQLG
Sbjct: 188 TRSPVPIPVPGLSD----IVAVVAGGSSSLAL---------RADGTVWAWGDNRYGQLGD 234
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT P +V L + + G +H + + G W+WG L ++ R
Sbjct: 235 GTTVRRAAPVRVANLDAVTH---ISAGAYHALALRADGTAWAWGYNAFGQLGDGTTVQRT 291
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P+LI + V G H++ V DG +W+WG R LGTG
Sbjct: 292 L------PVLIG--------LTETRTVVAGNYHSLAVRTDG-AVWAWGDNRYRQLGTGNL 336
Query: 353 IDFFAP 358
P
Sbjct: 337 TSSAVP 342
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/307 (23%), Positives = 119/307 (38%), Gaps = 49/307 (15%)
Query: 58 DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVS 114
DS + + A + + G SLA+ + G ++ WG L D +T+
Sbjct: 36 DSATETVRQRAGARLPPVRLAVGQYHSLAVHSEGTVFAWGFNRLGQLGDGTTQ------- 88
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
+PV + V VA G ++ +AL G+ ++WG N +GQLG G
Sbjct: 89 -DKAAPVQVAGVASAVSVAAGDQYSLALDENGD--------VWAWGDNASGQLGDGTLTP 139
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R +P+ + Q + G H L + W +G + QLG T
Sbjct: 140 RAQPRRVSGLTQG-----VSLASGFAHAVAL--------RADGTVWAWGDNRSNQLGSAT 186
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ VP V L +V+V G + + + G VW+WG + G + + R A
Sbjct: 187 LTRSPVPIPVPGLSD---IVAVVAGGSSSLALRADGTVWAWGDNR-YGQLGDGTTVRRAA 242
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P+ ++ ++ GA H + + DG W+WG G LG G T+
Sbjct: 243 -----PVRVA-------NLDAVTHISAGAYHALALRADGTA-WAWGYNAFGQLGDGTTVQ 289
Query: 355 FFAPAIV 361
P ++
Sbjct: 290 RTLPVLI 296
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 87/336 (25%), Positives = 122/336 (36%), Gaps = 81/336 (24%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I +V AGG SLA+ G +W WG+ L D +T V P V + V
Sbjct: 202 IVAVVAGGSSSLALRADGTVWAWGDNRYGQLGDGTT------VRRAAPVRVANLD--AVT 253
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII--------- 181
++ G+ H +AL + D ++WG N GQLG G R P +I
Sbjct: 254 HISAGAYHALALRA--------DGTAWAWGYNAFGQLGDGTTVQRTLPVLIGLTETRTVV 305
Query: 182 -------ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM-------------------L 215
+ WA + T LT P
Sbjct: 306 AGNYHSLAVRTDGAVWAWGDNRYRQLGTGNLTSSAVPLHAGMTGGVTLVAGFRHSVALGA 365
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ W++G GQLG T Q + P QV L + G HT ++ + G +W+W
Sbjct: 366 DGTAWSWGDNVFGQLGDTTFQPRMAPVQVTGLA--LGRADATSGQLHTVMLGANGRLWAW 423
Query: 276 G----MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
G + G G N+SL P+ ++G V+ G HT +
Sbjct: 424 GDNNQGQLGNGTQQNSSLPL--------PVNLTG----------ITSVSSGHRHTAALRL 465
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
DG +WSWG + G LG G D P V P LT
Sbjct: 466 DG-TVWSWGTNQYGQLGDGTRTDRSTPVQV--PGLT 498
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 32/178 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+ S+ AG M SLA+ G +W WG + L +T+G S P V +
Sbjct: 599 NVVSLAAGKMYSLALRADGTVWAWGYNASGQLGVGTTQG------SAVPLQVSGLS--AI 650
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ G+ H +AL S D ++WG N GQLG G ++RL P ++ + + +
Sbjct: 651 TSITAGTYHSLALRS--------DGWVWAWGFNFEGQLGNGTSDNRLTPGLVVSMSNAT- 701
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ G H+ L R + W +GL +GQLG G T A P QV+ L
Sbjct: 702 ----AIFAGDLHS--LAVRA------DGTLWAWGLNSHGQLGTGDTVEAWFPVQVQGL 747
>gi|218779101|ref|YP_002430419.1| chromosome condensation regulator RCC1 [Desulfatibacillum
alkenivorans AK-01]
gi|218760485|gb|ACL02951.1| regulator of chromosome condensation RCC1 [Desulfatibacillum
alkenivorans AK-01]
Length = 671
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 80/280 (28%), Positives = 120/280 (42%), Gaps = 50/280 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ AG SL + G +W WG C +T G V TP V V +A G
Sbjct: 132 LAAGTQFSLGLKTDGTVWSWG-CNT--YATLGLGDRVDRNTPQKVEALS--NAVALAAGD 186
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG---DRESRLRPKIIETFNQDSPWAVY 193
+H +AL G + SWG N NGQLGLG + PK +E + V
Sbjct: 187 DHTLALTRDGSVW--------SWGWNYNGQLGLGSIHEDTYESTPKKVEAISN-----VT 233
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ ++HT LT + W++G + GQLG G P++V+ L +
Sbjct: 234 AIAAQTYHTQALTR--------DGNVWSWGSNDFGQLGMGDQNDRDAPQKVEALSN---V 282
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V+++ G H+ V+ G VW+WG E LGL + D +P +
Sbjct: 283 VAINAGGNHSLAVTRDGQVWAWGENSEGQLGL--------GDLWDRDAPQKVE------- 327
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ V + G HT+ +T DG +W+WG+ G +GTG+
Sbjct: 328 ALSNVVAINAGGDHTLALTRDG-SVWAWGKNGRGQIGTGE 366
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 82/322 (25%), Positives = 122/322 (37%), Gaps = 67/322 (20%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW---------- 122
+ S+ G SLA+ G++W WG S G V S TP+ V
Sbjct: 39 NVVSLAGGEKHSLAVSGDGSVWSWG-------SNSAGQLGVESLTPASVLAPVHALYSGD 91
Query: 123 DFH--------GHTVVKVAC------------GSEHVVALVSAGETYK---GEDLVCYSW 159
DFH G + C G + V +++AG + D +SW
Sbjct: 92 DFHLFYDTDGDGTGDICDDCPYDPFKTAPGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSW 151
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G N LGLGDR R P+ +E + + G HT LT +
Sbjct: 152 GCNTYATLGLGDRVDRNTPQKVEALSN-----AVALAAGDDHTLALTR--------DGSV 198
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
W++G NGQLG G+ K++ + ++ +HT ++ G+VWSWG
Sbjct: 199 WSWGWNYNGQLGLGSIHEDTYESTPKKVEAISNVTAIAAQTYHTQALTRDGNVWSWGSND 258
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L + D +P + + V + G H++ VT DG ++W+W
Sbjct: 259 ------FGQLGMGDQNDRDAPQKVE-------ALSNVVAINAGGNHSLAVTRDG-QVWAW 304
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G D AP V
Sbjct: 305 GENSEGQLGLGDLWDRDAPQKV 326
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 114/279 (40%), Gaps = 44/279 (15%)
Query: 12 LCFTCFFMPFICYTSLNCCMDG----------QLGFSGSNSLVPCVIEQFLTIGAPDSLE 61
+C C + PF L+ C + LG ++ + T+G D ++
Sbjct: 107 ICDDCPYDPFKTAPGLSGCGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVD 166
Query: 62 DDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFT 117
++ +A ++ AG +LA+ G++W WG + G L S ++
Sbjct: 167 RNTPQKVEALSNAVALAAGDDHTLALTRDGSVWSWG------WNYNGQLGLGSIHEDTYE 220
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
+P V +A + H AL G +SWG+N+ GQLG+GD+ R
Sbjct: 221 STPKKVEAISNVTAIAAQTYHTQALTRDGNV--------WSWGSNDFGQLGMGDQNDRDA 272
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+ +E + V + G H+ +T + W +G GQLG G
Sbjct: 273 PQKVEALSN-----VVAINAGGNHSLAVTR--------DGQVWAWGENSEGQLGLGDLWD 319
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
P++V+ L +V+++ G HT ++ G VW+WG
Sbjct: 320 RDAPQKVEALSN---VVAINAGGDHTLALTRDGSVWAWG 355
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 62/152 (40%), Gaps = 27/152 (17%)
Query: 49 EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG 108
F +G D + D+ +A + ++ AGG SLA+ G +W WG ++EG
Sbjct: 257 NDFGQLGMGDQNDRDAPQKVEALSNVVAINAGGNHSLAVTRDGQVWAWG------ENSEG 310
Query: 109 GFSLVSSFTPSPVWDFHG-------HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
L +WD VV + G +H +AL G ++WG
Sbjct: 311 QLGL------GDLWDRDAPQKVEALSNVVAINAGGDHTLALTRDGSV--------WAWGK 356
Query: 162 NNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
N GQ+G G+ +S + ++ ++ + Y
Sbjct: 357 NGRGQIGTGEGQSLYNEPVHVIYSDENFYLFY 388
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 63/169 (37%), Gaps = 32/169 (18%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
WT+G ++G+LG G T +P Q+ L V L G H+ VS G VWSWG
Sbjct: 10 WTWGGNDDGRLGIGATGDQNLPVQLSYLSNVVSLAG---GEKHSLAVSGDGSVWSWGSNS 66
Query: 280 G--LG---LCPNASLTRNEA--------------GDAISPILISGNGPHGPKFQDPVQVA 320
LG L P + L A GD I + P+ P P
Sbjct: 67 AGQLGVESLTPASVLAPVHALYSGDDFHLFYDTDGDGTGDIC--DDCPYDPFKTAPGLSG 124
Query: 321 CGAAHTVLVTDDGYKL--------WSWGRGRSGVLGTGKTIDFFAPAIV 361
CG A +L + L WSWG LG G +D P V
Sbjct: 125 CGNAVPMLAAGTQFSLGLKTDGTVWSWGCNTYATLGLGDRVDRNTPQKV 173
>gi|159036719|ref|YP_001535972.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157915554|gb|ABV96981.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 553
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/314 (29%), Positives = 129/314 (41%), Gaps = 43/314 (13%)
Query: 60 LEDDSKTNHKAPIKI--------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L + S T+ P+ + +V AG SLA+ +AG + WG+ G S
Sbjct: 119 LGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLALTSAGTILAWGDNTF---GQLGDGS 175
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
TP V G TV +A G +H + L S G T +WG N GQLG G
Sbjct: 176 TTDRSTPVAVSLPAGTTVAAIAAGRDHNLVLTSTGPTL-------LTWGKNTRGQLGDGT 228
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R P + + V V G H+ +LT ++ W G GQLG
Sbjct: 229 TTGRDTPVAVTLPPGVT---VTSVAGGRDHSLVLTSDD------TALAW--GGNSFGQLG 277
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
+GTT +LVP V LP ++ G H++ ++S G ++WG G G N S T
Sbjct: 278 NGTTTDSLVPIAVA-LPTGTEATAIAAGRLHSAALTSEGAAFAWG-HNGRGQLGNGSTT- 334
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVAC-GAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
D+ P+ +S P +A + H V +T G L +WG +G LG G
Sbjct: 335 ----DSSEPVAVSL-----PADTRLTAIAGRDSDHNVTITSAGAAL-AWGANANGELGDG 384
Query: 351 KTIDFFAPAIVLWP 364
T D P V P
Sbjct: 385 STTDRSTPVAVSLP 398
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 85/283 (30%), Positives = 115/283 (40%), Gaps = 40/283 (14%)
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
LA+ +AG + WG + EG S SS TP V G V VA G++H +A
Sbjct: 100 LALTSAGTVLAWGR------NIEGQLGNGSTTSSSTPVAVSLPTGTRAVAVAAGADHSLA 153
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
L SAG +WG N GQLG G R P + + V + G H
Sbjct: 154 LTSAG--------TILAWGDNTFGQLGDGSTTDRSTPVAVSLPAGTT---VAAIAAGRDH 202
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
+LT T+G GQLG GTT P V LP V + SV G
Sbjct: 203 NLVLTSTG-------PTLLTWGKNTRGQLGDGTTTGRDTPVAVT-LPPGVTVTSVAGGRD 254
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H+ V++S +WG G N + T D++ PI ++ P + +A
Sbjct: 255 HSLVLTSDDTALAWGGNS-FGQLGNGTTT-----DSLVPIAVA-----LPTGTEATAIAA 303
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G H+ +T +G ++WG G LG G T D P V P
Sbjct: 304 GRLHSAALTSEGAA-FAWGHNGRGQLGNGSTTDSSEPVAVSLP 345
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 88/213 (41%), Gaps = 27/213 (12%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+WG N+ GQLG G + P AV + G+ A+ R
Sbjct: 55 TILAWGENDGGQLGNG-----------TMIDSSEPVAV-SLPAGTAVAAVAVG-DRHGLA 101
Query: 215 LESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
L S G N GQLG+G+T S+ P V LP V+V G H+ ++SAG +
Sbjct: 102 LTSAGTVLAWGRNIEGQLGNGSTTSSSTPVAVS-LPTGTRAVAVAAGADHSLALTSAGTI 160
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
+WG + G + S T D +P+ +S P +A G H +++T
Sbjct: 161 LAWG-DNTFGQLGDGSTT-----DRSTPVAVSL-----PAGTTVAAIAAGRDHNLVLTST 209
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
G L +WG+ G LG G T P V PP
Sbjct: 210 GPTLLTWGKNTRGQLGDGTTTGRDTPVAVTLPP 242
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 77/269 (28%), Positives = 105/269 (39%), Gaps = 47/269 (17%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G +++ S P V G V VA G H +AL SAG +WG N GQL
Sbjct: 68 GNGTMIDSSEPVAVSLPAGTAVAAVAVGDRHGLALTSAG--------TVLAWGRNIEGQL 119
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G S P + AV G+ H+ LT + W G+N
Sbjct: 120 GNGSTTSSSTPVAVSLPTGTRAVAVA---AGADHSLALTSAG------TILAW----GDN 166
Query: 228 --GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEKGLGLC 284
GQLG G+T P V LP + ++ G H V++S G + +WG
Sbjct: 167 TFGQLGDGSTTDRSTPVAVS-LPAGTTVAAIAAGRDHNLVLTSTGPTLLTWGKN------ 219
Query: 285 PNASLTRNEAGDAIS-----PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
TR + GD + P+ ++ P VA G H++++T D L +W
Sbjct: 220 -----TRGQLGDGTTTGRDTPVAVTL-----PPGVTVTSVAGGRDHSLVLTSDDTAL-AW 268
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
G G LG G T D P V P TE
Sbjct: 269 GGNSFGQLGNGTTTDSLVPIAVALPTGTE 297
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
HR ++ +G + GQLG+GT + P V LP + +V G H +
Sbjct: 44 HRSAATAVVSDTILAWGENDGGQLGNGTMIDSSEPVAVS-LPAGTAVAAVAVGDRHGLAL 102
Query: 267 SSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+SAG V +WG +E LG N S T + +P+ +S P V VA GA
Sbjct: 103 TSAGTVLAWGRNIEGQLG---NGSTTSSS-----TPVAVS-----LPTGTRAVAVAAGAD 149
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
H++ +T G L +WG G LG G T D P V P
Sbjct: 150 HSLALTSAGTIL-AWGDNTFGQLGDGSTTDRSTPVAVSLP 188
>gi|357520079|ref|XP_003630328.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524350|gb|AET04804.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 316
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRP 211
++VC SWG +GQLG GD + RL P + F+ QD + VTCG+ +T + K
Sbjct: 68 NVVC-SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQD----IVSVTCGADYT--VARSKSG 120
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
D+ +++G G+ G+LGHG +P ++ L Q + + + CG H V+
Sbjct: 121 KDV-----YSWGWGDFGRLGHGDPSDLFIPHPIRAL-QGLRIKQISCGDCHCLAVTMENK 174
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V SWG + N L D+ P I G + + VA GA H+V +T+
Sbjct: 175 VLSWGRNQ------NGELGLGTTKDSHVPQKILAF--EGIRIK---MVAAGAEHSVAITE 223
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG L+ WG GR G LG G T D P V
Sbjct: 224 DG-DLYGWGWGRYGNLGLGDTNDRLIPEKV 252
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 113/248 (45%), Gaps = 36/248 (14%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P+ + F G +V V CG+++ VA + G+D+ YSWG + G+LG GD
Sbjct: 90 LLPTKLSAFDGQDIVSVTCGADYTVA-----RSKSGKDV--YSWGWGDFGRLGHGDPSDL 142
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P I + +++CG H +T +E+ ++G +NG+LG GTT
Sbjct: 143 FIPHPIRALQG---LRIKQISCGDCHCLAVT--------MENKVLSWGRNQNGELGLGTT 191
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNE 293
+ + VP+++ + + + V G H+ ++ GD+ W WG LGL +
Sbjct: 192 KDSHVPQKILAF-EGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGL--------GD 242
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D + P ++ +G V V+CG HT+ ++ G L++ G + G LG G
Sbjct: 243 TNDRLIPEKVNIDG------DKIVMVSCGWRHTISISSSG-GLYTHGWSKYGQLGHGDFE 295
Query: 354 DFFAPAIV 361
D P V
Sbjct: 296 DCLVPRKV 303
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 29/209 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGA---LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I SV G ++A +G W WG D G F P P+ G +
Sbjct: 103 IVSVTCGADYTVARSKSGKDVYSWGWG-----DFGRLGHGDPSDLFIPHPIRALQGLRIK 157
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++CG H +A+ + SWG N NG+LGLG + P+ I F
Sbjct: 158 QISCGDCHCLAVTMENKVL--------SWGRNQNGELGLGTTKDSHVPQKILAFEGIR-- 207
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ V G+ H+ +T + + +G G G LG G T L+PE+V
Sbjct: 208 -IKMVAAGAEHSVAITE--------DGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDK 258
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +VS CG HT +SS+G +++ G K
Sbjct: 259 IVMVS--CGWRHTISISSSGGLYTHGWSK 285
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 25/177 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVV 130
++I + G LA+ + WG + + E G S P + F G +
Sbjct: 154 LRIKQISCGDCHCLAVTMENKVLSWGR----NQNGELGLGTTKDSHVPQKILAFEGIRIK 209
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA G+EH VA+ G+ Y WG G LGLGD RL P E N D
Sbjct: 210 MVAAGAEHSVAITEDGD--------LYGWGWGRYGNLGLGDTNDRLIP---EKVNIDGD- 257
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V+CG HT ++ +T G + GQLGHG + LVP +V+ L
Sbjct: 258 KIVMVSCGWRHTISISS--------SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 306
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEK 279
++G GE+GQLGHG T L+P ++ +VSV CG +T S +G DV+SWG
Sbjct: 72 SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADYTVARSKSGKDVYSWGWGD 130
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L + D P I G + + Q++CG H + VT + K+ SW
Sbjct: 131 ------FGRLGHGDPSDLFIPHPI--RALQGLRIK---QISCGDCHCLAVTMEN-KVLSW 178
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL 362
GR ++G LG G T D P +L
Sbjct: 179 GRNQNGELGLGTTKDSHVPQKIL 201
Score = 42.4 bits (98), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 72/181 (39%), Gaps = 39/181 (21%)
Query: 180 IIETFNQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+I + SP V ++ G+ HT ALL+ + ++ML +
Sbjct: 2 MIMSEKSASPPHVLLISAGASHTVALLSKQFESSEMLARFL---------------ISTP 46
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV-WSWGMEKGLGLCPNASLTRNEAGDA 297
L+PE + C + S V+ G+V SWG + + L + D
Sbjct: 47 LLPESWRL-----------CSKVNASAVNFPGNVVCSWGRGE------DGQLGHGDTDDR 89
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
+ P +S QD V V CGA +TV + G ++SWG G G LG G D F
Sbjct: 90 LLPTKLSAF-----DGQDIVSVTCGADYTVARSKSGKDVYSWGWGDFGRLGHGDPSDLFI 144
Query: 358 P 358
P
Sbjct: 145 P 145
>gi|297838741|ref|XP_002887252.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
gi|297333093|gb|EFH63511.1| hypothetical protein ARALYDRAFT_476103 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 93/319 (29%), Positives = 138/319 (43%), Gaps = 55/319 (17%)
Query: 65 KTNHKAPIKICSVKAGGMMSLA--------IDNAGALWMWG----NCPLPDSSTEGGFSL 112
+T+ + P I SV+ G SLA I +G L+ WG N L E
Sbjct: 324 ETDVQQPKFISSVRGLGFKSLACGDFHTCAITQSGDLYSWGDGTHNVDLLGHGNES---- 379
Query: 113 VSSFTPSPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
S + P V G V VACG H + S+G+ +++G + G LG GD
Sbjct: 380 -SCWIPKRVTGALQGLYVSYVACGPWHTAVVASSGQ--------LFTFGDGSFGALGHGD 430
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE-----SMCWTFGLGE 226
R S P+ ++ S V +V CG +HTA L E +T+G GE
Sbjct: 431 RRSTSVPREVKIL---SGLIVTKVACGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGE 487
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
GQLGHG + L+PE V L + V CG T ++S G V++ G
Sbjct: 488 KGQLGHGDNDAQLLPECVISLSNE-NICQVACGHSLTVSLTSTGHVYTMG---------- 536
Query: 287 ASLTRNEAGDAISPILISGNGP---HGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRG 342
S + G+ + GN P G + V ++ACG+ H ++T ++++WG+G
Sbjct: 537 -STAYGQLGNPTA----KGNFPARVEGDIVEASVEEIACGSYHVAVLTSKS-EIYTWGKG 590
Query: 343 RSGVLGTGKTIDFFAPAIV 361
+G LG G + PA+V
Sbjct: 591 LNGQLGHGTIENKREPAVV 609
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 121/294 (41%), Gaps = 48/294 (16%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV----KVACGSEHVVAL 142
D G +++WG T G SL S+ + T+V +ACG H V +
Sbjct: 243 FDALGDVFVWGESICDGVLTGTGNSLNSTTEDVLLPKALESTIVLDAQNIACGKCHAVLV 302
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + SWG G+LG G +PK I + + CG FHT
Sbjct: 303 TKQGEIF--------SWGEGKGGKLGHGLETDVQQPKFISSVRG---LGFKSLACGDFHT 351
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T + D+ W G LGHG S +P++V Q +Y+ V CG +H
Sbjct: 352 CAIT---QSGDLYS---WGDGTHNVDLLGHGNESSCWIPKRVTGALQGLYVSYVACGPWH 405
Query: 263 TSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
T+VV+S+G ++++G LG S + +S ++++ +VA
Sbjct: 406 TAVVASSGQLFTFGDGSFGALGHGDRRSTSVPREVKILSGLIVT-------------KVA 452
Query: 321 CGAAHT---VLVTDDGY---------KLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CG HT V VT++ ++++WG G G LG G P V+
Sbjct: 453 CGVWHTAALVEVTNEASEAEVGSSRGQVFTWGDGEKGQLGHGDNDAQLLPECVI 506
>gi|338723767|ref|XP_001496703.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Equus
caballus]
Length = 1050
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G +LA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHNLALSDRGQLFSWG------AGSDGQLGLMTTEDAVAVPRVIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHSLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEEDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKE 246
+ V CG H L+ R + +++G G +GQLG TT+ A+ VP +++
Sbjct: 86 ----IVHVACGESHNLALSDRGQ--------LFSWGAGSDGQLGLMTTEDAVAVPRVIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H+ +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHSLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEEDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 90/265 (33%), Gaps = 86/265 (32%)
Query: 32 DGQLGFSGSNSLV--PCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
DGQLG + V P VI+ K N + I V G SLA+
Sbjct: 113 DGQLGLMTTEDAVAVPRVIQ---------------KLNQQT---ILQVSCGNWHSLALAA 154
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGHTVVKVACGSEHVVALVSA 145
G + WG ++ G L F +P V G + +VA G H AL +
Sbjct: 155 DGQFFTWGK------NSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLS 208
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
G + WG NN GQLGL D E R P ++ V ++CG HTA+L
Sbjct: 209 G--------AVFGWGMNNAGQLGLSDEEDRESPCHVKLLRTQK---VVYISCGEEHTAVL 257
Query: 206 TH----------------------RKRPNDMLESM-----------------------CW 220
T P +LE M +
Sbjct: 258 TKSGGVFTFGAGSCGQLGHDSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIY 317
Query: 221 TFGLGENGQLGHGTTQSALVPEQVK 245
FG G GQLG G T + P VK
Sbjct: 318 AFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|260802292|ref|XP_002596026.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
gi|229281280|gb|EEN52038.1| hypothetical protein BRAFLDRAFT_113678 [Branchiostoma floridae]
Length = 1015
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/330 (26%), Positives = 140/330 (42%), Gaps = 62/330 (18%)
Query: 33 GQLGFS----GSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAID 88
GQLG + G+NS P ++++ + ++I V GG SLA+
Sbjct: 114 GQLGHTLEAGGNNSRRPRMVKEL------------------SSLQIVQVACGGKHSLALS 155
Query: 89 NAGALWMWGNCPLPDSSTEGGF-SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
N G ++ WGN +S + G S + P + G ++ G H L +G
Sbjct: 156 NDGRIFSWGN----NSHGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSFVLSKSG- 210
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+ +G N GQLGLGD R P +++ V ++CG HTA+LT
Sbjct: 211 -------AVFGFGRNTFGQLGLGDTGDRKYPTHVKSLRS---LKVTHISCGEEHTAVLT- 259
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVV 266
L+ TFG G GQLGH + +P +V EL + + + CG HT + V
Sbjct: 260 -------LDGGVLTFGAGSYGQLGHNSNNHEALPRKVFEL-MGLEVTQLACGRMHTMAYV 311
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD-PVQVACGAAH 325
S+G ++S+ GL N L + +PI + +GP P D ++ C
Sbjct: 312 ESSGRIYSF------GLGGNGQLGSKGTTNCNTPITV--DGPFVPFAGDNSLEEQCYVVQ 363
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+T G + ++ S + GT K +DF
Sbjct: 364 A--ITAGGDQAFALA---SKLQGTPKPLDF 388
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/324 (25%), Positives = 144/324 (44%), Gaps = 47/324 (14%)
Query: 53 TIGAPDSLEDDSKTNHKAPIKICS--------VKAGGMMSLAIDNAGALWMWG--NCPLP 102
T G+ D + HK P I + V G +L +++ ++ WG +C
Sbjct: 57 TCGSNDYGQLGQDKGHKRPTVITALDTQSIQQVSCGDYHNLVVNDKYQVFSWGYDDCGQL 116
Query: 103 DSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGAN 162
+ E G + +S P V + +V+VACG +H +AL + G + SWG N
Sbjct: 117 GHTLEAGGN--NSRRPRMVKELSSLQIVQVACGGKHSLALSNDGRIF--------SWGNN 166
Query: 163 NNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTF 222
++GQLG+G +++ +P+ + + P+ ++ G H+ +L+ F
Sbjct: 167 SHGQLGIGSTKNQPKPQELTSLT-GIPFC--QIVAGGSHSFVLSKSGA----------VF 213
Query: 223 GLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
G G N GQLG G T P VK L + + + + CG HT+V++ G V ++G
Sbjct: 214 GFGRNTFGQLGLGDTGDRKYPTHVKSL-RSLKVTHISCGEEHTAVLTLDGGVLTFGAGSY 272
Query: 281 LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
L N++ +A+ + G + Q+ACG HT+ + +++S+G
Sbjct: 273 GQLGHNSN-----NHEALPRKVFELMG------LEVTQLACGRMHTMAYVESSGRIYSFG 321
Query: 341 RGRSGVLGTGKTIDFFAPAIVLWP 364
G +G LG+ T + P V P
Sbjct: 322 LGGNGQLGSKGTTNCNTPITVDGP 345
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 94/214 (43%), Gaps = 57/214 (26%)
Query: 157 YSWGANNNGQLGLGDRESR--LRPKIIETFNQDSPW----AVYEVTCGSFHTALLTHRKR 210
+ WGA NG+LGLG E L PK + P+ A+ EV+CG HT +
Sbjct: 2 FCWGAARNGELGLGGIEEDVILAPK-------EQPFGATKAMREVSCGRQHTVFV----- 49
Query: 211 PNDMLESMCWTFGLGENGQLGHG------TTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
+ E +T G + GQLG T +AL + +++ V CG +H
Sbjct: 50 ---LAEGTVYTCGSNDYGQLGQDKGHKRPTVITALDTQSIQQ---------VSCGDYHNL 97
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP------VQ 318
VV+ V+SWG + C T EAG GN P+ VQ
Sbjct: 98 VVNDKYQVFSWGYDD----CGQLGHTL-EAG---------GNNSRRPRMVKELSSLQIVQ 143
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
VACG H++ +++DG +++SWG G LG G T
Sbjct: 144 VACGGKHSLALSNDG-RIFSWGNNSHGQLGIGST 176
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/236 (26%), Positives = 107/236 (45%), Gaps = 41/236 (17%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+CG +H V +++ G Y+ G+N+ GQ LG + RP +I + S
Sbjct: 38 EVSCGRQHTVFVLAEG--------TVYTCGSNDYGQ--LGQDKGHKRPTVITALDTQS-- 85
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH---GTTQSALVPEQVKEL 247
+ +V+CG +H ++ ND + W G + GQLGH ++ P VKEL
Sbjct: 86 -IQQVSCGDYHNLVV------NDKYQVFSW--GYDDCGQLGHTLEAGGNNSRRPRMVKEL 136
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISG 305
+ +V V CG H+ +S+ G ++SWG LG+ + + + +++ I
Sbjct: 137 SS-LQIVQVACGGKHSLALSNDGRIFSWGNNSHGQLGIGSTKNQPKPQELTSLTGIPF-- 193
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ G +H+ +++ G ++ +GR G LG G T D P V
Sbjct: 194 -----------CQIVAGGSHSFVLSKSG-AVFGFGRNTFGQLGLGDTGDRKYPTHV 237
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 84/223 (37%), Gaps = 35/223 (15%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
SL DG++ G+NS L IG+ + + I C + AGG S
Sbjct: 151 SLALSNDGRIFSWGNNS------HGQLGIGSTKNQPKPQELTSLTGIPFCQIVAGGSHSF 204
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVVKVACGSEHVVAL 142
+ +GA++ +G +T G L + P+ V V ++CG EH L
Sbjct: 205 VLSKSGAVFGFGR------NTFGQLGLGDTGDRKYPTHVKSLRSLKVTHISCGEEHTAVL 258
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPWAVYEVTCGSFH 201
G ++GA + GQLG P K+ E + V ++ CG H
Sbjct: 259 TLDGGV--------LTFGAGSYGQLGHNSNNHEALPRKVFELMGLE----VTQLACGRMH 306
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
T ++FGLG NGQLG T + P V
Sbjct: 307 TMAYVES-------SGRIYSFGLGGNGQLGSKGTTNCNTPITV 342
>gi|297673957|ref|XP_002815007.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 isoform 2
[Pongo abelii]
Length = 1050
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL S G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALASDGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGS------YGQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H ++S G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSYGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|449447436|ref|XP_004141474.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like isoform
2 [Cucumis sativus]
Length = 472
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 96/348 (27%), Positives = 152/348 (43%), Gaps = 72/348 (20%)
Query: 51 FLTIGAPD--SLEDDSKTNHKAPIKIC--------SVKAGGMMSLAI----DNAGAL--- 93
T GA D L D ++ K P K+ SV G + AI +N G L
Sbjct: 81 LFTWGANDFGQLGDGTEEKSKLPKKVNQLQGEFVKSVSCGAHCTAAIAEPRENDGTLSTC 140
Query: 94 --WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
W+WG + + +FTP + + +V+CG+ HVVAL G+
Sbjct: 141 RLWIWGQ----NQGSNFPRLFWGAFTPQTI-------IRQVSCGAVHVVALSDDGQLQ-- 187
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQ---DSP--WAVYEVTCGSFHTALL 205
+WG N GQLG G L+ +II F + ++P + +V+CG +H+A +
Sbjct: 188 ------AWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITKVSCGEYHSAAI 241
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSA---LVPEQVKELPQYVYLVSVDCGLFH 262
+ +T+GLG GQLGH + QSA L+P +V L + + + CG H
Sbjct: 242 SENGE--------VYTWGLGSMGQLGHCSLQSADKELIPRRVVALDG-ICVKDIACGGVH 292
Query: 263 TSVVSSAGDVWSWGMEKGLGLC--PNASLTRNEAGDAIS-----PILISGNGPHGPKFQD 315
T ++ G +++WG + L P AGD+ + P+++ +G
Sbjct: 293 TCAITQNGSLYAWGGGQVGQLGVGPQTGFFSCIAGDSETFLRNLPVVVVSDGVQ------ 346
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
VACG +HT++ T DG ++ WG G K+ + P+ V W
Sbjct: 347 --HVACGHSHTLVSTKDG-RIHGWGYNSYGQAANEKSTYAWYPSPVDW 391
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 104/264 (39%), Gaps = 75/264 (28%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ +ACG EH A+ S G + +WGAN+ GQLG G E PK + NQ
Sbjct: 63 LDIACGREHTAAVASDGSLF--------TWGANDFGQLGDGTEEKSKLPKKV---NQLQG 111
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMC-----------------W------------ 220
V V+CG+ TA + R ND S C W
Sbjct: 112 EFVKSVSCGAHCTAAIAE-PRENDGTLSTCRLWIWGQNQGSNFPRLFWGAFTPQTIIRQV 170
Query: 221 -----------------TFGLGENGQLGHGTTQSALVPEQV--------KELPQYVYLVS 255
+G E GQLG G T L ++ E P+ V +
Sbjct: 171 SCGAVHVVALSDDGQLQAWGYNEYGQLGRGVTSEGLQGARIINAFAKFLDEAPELVTITK 230
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V CG +H++ +S G+V++WG+ +G + SL A + P + G +D
Sbjct: 231 VSCGEYHSAAISENGEVYTWGLGS-MGQLGHCSL--QSADKELIPRRVV--ALDGICVKD 285
Query: 316 PVQVACGAAHTVLVTDDGYKLWSW 339
+ACG HT +T +G L++W
Sbjct: 286 ---IACGGVHTCAITQNG-SLYAW 305
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR------PKIIETFNQ-DSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ G ++ +LR P + + +S W ++ CG HTA +
Sbjct: 22 YVWGYNQSGQTGRKGKDHQLRVPRQLHPDLFGCPGEINSRW--LDIACGREHTAAVAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G + GQLG GT + + +P++V +L Q ++ SV CG T+ ++
Sbjct: 78 ------DGSLFTWGANDFGQLGDGTEEKSKLPKKVNQL-QGEFVKSVSCGAHCTAAIAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G ++ R G A +P I QV+
Sbjct: 131 RENDGTLSTCRLWIWGQNQG------SNFPRLFWG-AFTPQTI------------IRQVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H V ++DDG +L +WG G LG G T + A ++
Sbjct: 172 CGAVHVVALSDDG-QLQAWGYNEYGQLGRGVTSEGLQGARII 212
>gi|428172054|gb|EKX40966.1| hypothetical protein GUITHDRAFT_46944, partial [Guillardia theta
CCMP2712]
Length = 355
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 133/341 (39%), Gaps = 81/341 (23%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSS--FTPSPVWDFHGHTVVK 131
S+ AG S I G ++ WG EG G +V+ P V
Sbjct: 40 SIGAGKSHSAVIAEDGDVYTWGR------GWEGQLGHDVVTEIELEPHIVPKMENRGSSA 93
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPW 190
VACG H V + G + Y+WG N GQLG GD +S P +I++ N S
Sbjct: 94 VACGRNHTVVVTDNG--------LIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPS-- 143
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + CG FHT + +E W++G + GQLGHG T++ P QV + +
Sbjct: 144 -VLSIACGEFHTVAIC--------IEGTIWSWGRNQCGQLGHGNTKTCYFPTQVVGMAKK 194
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGL------------------------- 281
+ + CG HT V++ A +++WG + GL
Sbjct: 195 I-CIRAACGGQHTLVLTDANKIYAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRSGACHVL 253
Query: 282 -GLCPNASLTRNEA----GDAISPILISGNGPHGP--------KFQDPVQVACGAAHTVL 328
G + +L +NE G L G+ H P + Q+ACG H V
Sbjct: 254 CGYSHSMALMKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVA 313
Query: 329 VTDDGYK--------LWSWGRGRSGVLGTGKTIDFFAPAIV 361
D + ++SWGRG G LG + + P IV
Sbjct: 314 FVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIV 354
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/208 (30%), Positives = 94/208 (45%), Gaps = 22/208 (10%)
Query: 157 YSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
YSWG N GQLGLG + P I+ + + V + G H+A++
Sbjct: 2 YSWGKNKYGQLGLGHTNNVPLPTGILSLSDPLNRKNVRSIGAGKSHSAVIAE-------- 53
Query: 216 ESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ +T+G G GQLGH T+ L P V ++ +V CG HT VV+ G +++
Sbjct: 54 DGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGS-SAVACGRNHTVVVTDNGLIYT 112
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K L + + SP+LI + +ACG HTV + +G
Sbjct: 113 WGENKA------GQLGTGDLKSSNSPVLIDS----ALNLPSVLSIACGEFHTVAICIEG- 161
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+WSWGR + G LG G T + P V+
Sbjct: 162 TIWSWGRNQCGQLGHGNTKTCYFPTQVV 189
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/237 (26%), Positives = 100/237 (42%), Gaps = 32/237 (13%)
Query: 140 VALVSAGETYKG---EDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAVYEV 195
V + AG+++ ED Y+WG GQLG E L P I+ AV
Sbjct: 38 VRSIGAGKSHSAVIAEDGDVYTWGRGWEGQLGHDVVTEIELEPHIVPKMENRGSSAV--- 94
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CG HT ++T + +T+G + GQLG G +S+ P + ++S
Sbjct: 95 ACGRNHTVVVTD--------NGLIYTWGENKAGQLGTGDLKSSNSPVLIDSALNLPSVLS 146
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
+ CG FHT + G +WSWG + C L P + G +
Sbjct: 147 IACGEFHTVAICIEGTIWSWGRNQ----C--GQLGHGNTKTCYFPTQVVGMAK-----KI 195
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 372
++ ACG HT+++T D K+++WG G LG ++ VL P + + ++
Sbjct: 196 CIRAACGGQHTLVLT-DANKIYAWGSNAYGQLGLNRS-----DKAVLQPDIVDHLRR 246
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 81/190 (42%), Gaps = 24/190 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S+ G ++AI G +W WG G + + + P+ V ++ A
Sbjct: 144 VLSIACGEFHTVAICIEGTIWSWGR---NQCGQLGHGNTKTCYFPTQVVGMAKKICIRAA 200
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWAV 192
CG +H + L A + Y+WG+N GQLGL + + L+P I++ +
Sbjct: 201 CGGQHTLVLTDANKI--------YAWGSNAYGQLGLNRSDKAVLQPDIVDHLRRS---GA 249
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ L M +T+G + GQLG G + VPE V L + V
Sbjct: 250 CHVLCGYSHSMAL--------MKNEQIYTWGRNDCGQLGLGHYTHSPVPELVTAL-RSVR 300
Query: 253 LVSVDCGLFH 262
+ + CG H
Sbjct: 301 VQQIACGYDH 310
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 73/179 (40%), Gaps = 23/179 (12%)
Query: 73 KICSVKA-GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGH 127
KIC A GG +L + +A ++ WG S+ G L S P V
Sbjct: 194 KICIRAACGGQHTLVLTDANKIYAWG------SNAYGQLGLNRSDKAVLQPDIVDHLRRS 247
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V CG H +AL+ K E + Y+WG N+ GQLGLG P+++
Sbjct: 248 GACHVLCGYSHSMALM------KNEQI--YTWGRNDCGQLGLGHYTHSPVPELVTALRSV 299
Query: 188 SPWAVYEVTCGSFH-TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG H A + P +++G GE GQLGH S P V+
Sbjct: 300 R---VQQIACGYDHCVAFVADEVEPGMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 61/154 (39%), Gaps = 26/154 (16%)
Query: 33 GQLGFSGSNSLV--PCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
GQLG + S+ V P +++ GA C V G S+A+
Sbjct: 224 GQLGLNRSDKAVLQPDIVDHLRRSGA------------------CHVLCGYSHSMALMKN 265
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
++ WG D G S P V V ++ACG +H VA V A E
Sbjct: 266 EQIYTWGR---NDCGQLGLGHYTHSPVPELVTALRSVRVQQIACGYDHCVAFV-ADEVEP 321
Query: 151 GEDLV--CYSWGANNNGQLGLGDRESRLRPKIIE 182
G + YSWG GQLG + SR P+I+E
Sbjct: 322 GMPPLEHVYSWGRGEEGQLGHNELLSRCTPRIVE 355
>gi|390353202|ref|XP_789385.3| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Strongylocentrotus purpuratus]
Length = 1070
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 139/343 (40%), Gaps = 59/343 (17%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
S C DGQLG SG VP SL + A +I + G +
Sbjct: 5 SWGCTQDGQLGISGLGDDVP-------------SLSSPREVPALAGKQIREISCGLRHTC 51
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSA 145
+ G + M C D G S P + + +V+CG++H +A+
Sbjct: 52 VLLRDGTVMM---CGANDRGQLGQDRPGSELAHVPATE--TLVITQVSCGNDHTLAVTDR 106
Query: 146 GETYKGEDLVCYSWGANNNGQLGL--GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
G+ WG N+ GQ GL GD E + +P+ +++ S V +V CGS H+
Sbjct: 107 GQV--------LGWGRNDRGQCGLSTGDSEDKRKPRFLKSL---SSCQVAQVACGSMHSM 155
Query: 204 LLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALV---PEQVKELPQYVYLVSVDC 258
LT R F G+N GQLG G L P+Q+ LP V + + C
Sbjct: 156 ALTRDGR----------IFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPG-VPIRRLAC 204
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
G +H+ +S +G V+ WG C L E D +SP + K+
Sbjct: 205 GGWHSFALSVSGAVFGWGKNN----CGQLGLGTTE--DRVSPTPLKNLKTKQVKY----- 253
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ACG +T ++T G L+ +G+G G LG G + P V
Sbjct: 254 IACGQNYTAILTASG-GLFLFGQGSEGQLGHGSHSNEVNPRSV 295
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 85/205 (41%), Gaps = 21/205 (10%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V G M S+A+ G ++ WG+ + P + G + ++
Sbjct: 143 QVAQVACGSMHSMALTRDGRIFAWGDNSFGQLGIGAPGRTLYRDHPQQLSSLPGVPIRRL 202
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H AL +G + WG NN GQLGLG E R+ P ++ V
Sbjct: 203 ACGGWHSFALSVSG--------AVFGWGKNNCGQLGLGTTEDRVSPTPLKNLKTKQ---V 251
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG +TA+LT + FG G GQLGHG+ + + P V+
Sbjct: 252 KYIACGQNYTAILT--------ASGGLFLFGQGSEGQLGHGSHSNEVNPRSVQGFLGS-E 302
Query: 253 LVSVDCGLFHTSVVSS-AGDVWSWG 276
+ V CG HT V+ G +S G
Sbjct: 303 ITQVACGRQHTLVLEGRTGRFFSLG 327
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/198 (29%), Positives = 84/198 (42%), Gaps = 28/198 (14%)
Query: 157 YSWGANNNGQL---GLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+SWG +GQL GLGD L P+ + + + E++CG HT +L
Sbjct: 4 FSWGCTQDGQLGISGLGDDVPSLSSPREVPAL---AGKQIREISCGLRHTCVLLR----- 55
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
D MC G + GQLG S L E + + V CG HT V+ G V
Sbjct: 56 DGTVMMC---GANDRGQLGQDRPGSELAHVPATE---TLVITQVSCGNDHTLAVTDRGQV 109
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG G C L+ ++ D P + QVACG+ H++ +T D
Sbjct: 110 LGWG-RNDRGQC---GLSTGDSEDKRKPRFLKSLSSC-----QVAQVACGSMHSMALTRD 160
Query: 333 GYKLWSWGRGRSGVLGTG 350
G ++++WG G LG G
Sbjct: 161 G-RIFAWGDNSFGQLGIG 177
>gi|395834129|ref|XP_003790065.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Otolemur
garnettii]
Length = 1050
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L ++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLTTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKNGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEGGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLTTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKNGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|119626423|gb|EAX06018.1| hect domain and RLD 6, isoform CRA_a [Homo sapiens]
Length = 385
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + K V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVG-----ALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLVS--QIDCGSYHTLAYVHTTGQVVSFG 313
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|218197208|gb|EEC79635.1| hypothetical protein OsI_20852 [Oryza sativa Indica Group]
Length = 1038
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF----SLVSSFTPSPVWD-FHGHTVVK 131
+ G + + +G L+ WG D S G + VS + P V G V+
Sbjct: 318 IACGEFHTCVVTASGDLYDWG-----DGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLS 372
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H +S+G+ +++G G LG GDRES PK +E S +
Sbjct: 373 VACGSWHSALTMSSGK--------LFTFGDGTFGSLGHGDRESVAYPKEVEAL---SGFR 421
Query: 192 VYEVTCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+V CG +H+A + + + + +T+G G+ +LGHG ++ LVP V+ L
Sbjct: 422 AMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD 481
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + V CG T ++++G V++ G N N D P ++
Sbjct: 482 HNFH-QVACGHSMTVALATSGHVFTMG-------SSNNGQLGNPKADGKQPCMV------ 527
Query: 310 GPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CG+ H +T ++++WG G +G LG G D P +V
Sbjct: 528 ----QDKLGNELVEEISCGSNHVAALTSRS-EVYTWGMGANGRLGHGSVEDKKKPTLV 580
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG +EG + + S T P P+ V ++ACGS H+
Sbjct: 217 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLIPKPLESDVVLDVQQIACGSRHIGLT 276
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E+ + V + CG FHT
Sbjct: 277 TRQGEVF--------TWGEELGGRLGHGTDTDICRPKLVESLAVSN---VEYIACGEFHT 325
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
++T D+ + W G G LGHGT S +P++V + + ++SV CG +H
Sbjct: 326 CVVT---ASGDLYD---WGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWH 379
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ S+G ++++ G LG S+ + +A+S ++VA
Sbjct: 380 SALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-------------RAMKVA 426
Query: 321 CGAAHTVLVTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ + + KL++WG G LG G P V
Sbjct: 427 CGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCV 476
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D + G + P+ V H +VACG VAL ++G +
Sbjct: 451 LFTWGD---GDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVF--- 504
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ G++NNGQLG + + +P +++ ++ V E++CGS H A LT R
Sbjct: 505 -----TMGSSNNGQLGNPKADGK-QPCMVQ--DKLGNELVEEISCGSNHVAALTSR---- 552
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G+G NG+LGHG+ + P V L ++ S+ CG T+ +
Sbjct: 553 ----SEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR-HVKSISCGSNFTTCI 601
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 28/260 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ SV G S ++G L+ +G+ + G S P V G +K
Sbjct: 368 LQVLSVACGSWHSALTMSSGKLFTFGDGTF---GSLGHGDRESVAYPKEVEALSGFRAMK 424
Query: 132 VACGSEHVVALV--SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H A+V S + ++WG + +LG GD+E++L P ++ +
Sbjct: 425 VACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHN- 483
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
++V CG T L +T G NGQLG+ P V++
Sbjct: 484 --FHQVACGHSMTVALA--------TSGHVFTMGSSNNGQLGNPKADGKQ-PCMVQDKLG 532
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + CG H + ++S +V++WGM N L D P L+
Sbjct: 533 NELVEEISCGSNHVAALTSRSEVYTWGMG------ANGRLGHGSVEDKKKPTLVD----- 581
Query: 310 GPKFQDPVQVACGAAHTVLV 329
K + ++CG+ T +
Sbjct: 582 ALKDRHVKSISCGSNFTTCI 601
>gi|348676014|gb|EGZ15832.1| hypothetical protein PHYSODRAFT_315997 [Phytophthora sojae]
Length = 614
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 125/281 (44%), Gaps = 40/281 (14%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVVALVS 144
++ AL GN + G L SS T + V + G V V C H ++
Sbjct: 131 EHLAALHANGNLYTVGFNMRGQLGLGSSTTVMEATLVEELAGKRVADVGCSYFHTAIVMD 190
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
G+ Y+ G N+ GQLGLGD R L P+ +E F + V V CG +T
Sbjct: 191 NGD--------LYACGCNDYGQLGLGDHRNGELVPRPVEYFFR---RPVLAVACGQHYTI 239
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+ + FG ++GQLG T++ P ++ + + + CG H
Sbjct: 240 A--------SLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTRLAAPLDRLVVPQLSCGYHH 291
Query: 263 TSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
T+VV+ G V+++G LGL + R ++++ + I+ QVA
Sbjct: 292 TAVVTEDGAVYTFGRNDYGQLGLGHKMHMARPARVESLARMRIT-------------QVA 338
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG HT++++DDG K++ +GR G LG ++D +P ++
Sbjct: 339 CGCYHTLVLSDDG-KVFPFGRNNHGQLGLETSVDCLSPQLI 378
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 108/295 (36%), Gaps = 92/295 (31%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
YS+G N G+L LGD R P ++ N + V +V CG+ TA+L
Sbjct: 34 YSFGQNTYGELALGDTTDRSAPIRVDLGNSNHGRRVVDVACGNEQTAILFEDGDVYTCGY 93
Query: 206 ---------------THRKRP---------------NDMLESM-----CWTFGLGENGQL 230
T R P ++ L ++ +T G GQL
Sbjct: 94 NDSGQCAIGTTERVPTLRFSPGLSSNRTVRIFSGNGSEHLAALHANGNLYTVGFNMRGQL 153
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPN 286
G G++ + + V+EL + V C FHT++V GD+++ G + GLG N
Sbjct: 154 GLGSSTTVMEATLVEELAGK-RVADVGCSYFHTAIVMDNGDLYACGCNDYGQLGLGDHRN 212
Query: 287 ASLT-RNEAGDAISPILISGNGPHGP-----------------------KFQDPV----- 317
L R P+L G H +PV
Sbjct: 213 GELVPRPVEYFFRRPVLAVACGQHYTIASLRDGGVVAFGKNDHGQLGLDSTSEPVSQPTR 272
Query: 318 -----------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q++CG HT +VT+DG ++++GR G LG G + PA V
Sbjct: 273 LAAPLDRLVVPQLSCGYHHTAVVTEDG-AVYTFGRNDYGQLGLGHKMHMARPARV 326
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 87/192 (45%), Gaps = 36/192 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT--PSPVWDFHGHTVVK 131
I S++ GG+++ ++ G L + DS++E VS T +P+ V +
Sbjct: 239 IASLRDGGVVAFGKNDHGQLGL-------DSTSEP----VSQPTRLAAPLDRL---VVPQ 284
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CG H + ED Y++G N+ GQLGLG + RP +E+ +
Sbjct: 285 LSCGYHHTAVVT--------EDGAVYTFGRNDYGQLGLGHKMHMARPARVESLAR---MR 333
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CG +HT +L+ + + FG +GQLG T+ L P+ + L
Sbjct: 334 ITQVACGCYHTLVLSD--------DGKVFPFGRNNHGQLGLETSVDCLSPQLISTLRNKT 385
Query: 252 YLVSVDCGLFHT 263
+ V G +H+
Sbjct: 386 -VTKVAAGFYHS 396
>gi|55832766|gb|AAV66896.1| truncated HERC6 [Homo sapiens]
Length = 364
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + K V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVG-----ALKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLVS--QIDCGSYHTLAYVHTTGQVVSFG 313
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|282722852|gb|ADA84472.1| retinitis pigmentosa GTPase regulator protein 2 ORF15 [Danio rerio]
Length = 1413
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 137/307 (44%), Gaps = 54/307 (17%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGH 127
P++I G + + G L+M+G S+ G L + T P+ V
Sbjct: 38 PLRIS---CGDEHTALVTENGKLFMFG------SNNWGQLGLGTKTTVNKPTCVKALRSE 88
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V ACG H + S G Y+ G NN GQLGLGD R ++E FN+
Sbjct: 89 RVKLTACGRTHTLVFTSRGN--------LYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQ 140
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P + + GS +A LT R + G GQ+G G +AL P++V +
Sbjct: 141 GPIKM--LAAGSNTSAALTQDGR--------LYMRGDNSEGQIGLGKESNALTPQEV-SV 189
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISG 305
+ V+ VS CG +H++ V+ G ++++G + LGL L ++ ++ I
Sbjct: 190 GKRVFWVS--CGYYHSAFVTVDGALYTFGEKDSGKLGLS-TEKLANHKVPQQVTDIP--- 243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
VQVACG HTV +T++ +++S+G G+ G LG G I F + P
Sbjct: 244 --------DRVVQVACGGGHTVALTEN--EVYSFGLGQFGQLGHGTFI--FESRL---PR 288
Query: 366 LTEEFKQ 372
+ E F++
Sbjct: 289 VVEHFRK 295
>gi|159038540|ref|YP_001537793.1| chromosome condensation regulator RCC1 [Salinispora arenicola
CNS-205]
gi|157917375|gb|ABV98802.1| regulator of chromosome condensation RCC1 [Salinispora arenicola
CNS-205]
Length = 579
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 127/297 (42%), Gaps = 45/297 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+ ++ GG+ +LA+ +AG WG+ L D ST S TP V G T+
Sbjct: 147 TVTALSGGGVHNLAVTSAGTALAWGDNFWGQLGDGSTT------RSRTPVAVNVPAGTTI 200
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VA G H +A+ SAG +WG N++GQLG G P D P
Sbjct: 201 TAVAAGQGHSLAVTSAGT--------ALAWGDNSSGQLGDGTATDSSIP-----VAADVP 247
Query: 190 WA--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V G H+ LT + + W G +GQLG GTT S+ P V ++
Sbjct: 248 AGTTITAVAAGGLHSLALTSGG------DVLAW--GANGSGQLGDGTTTSSSTPVAV-DV 298
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
P + +V G H+ V+SAGDV +WG + G + S T + +P+ + N
Sbjct: 299 PAGTTVTAVAAGGRHSLAVTSAGDVLAWG-DNTAGQLGDGSTTHSS-----TPVAV--NV 350
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
P G VA G+ H++ VT L +WG G LG G T P V P
Sbjct: 351 PAGTTIT---AVATGSGHSLAVTSTDTAL-AWGDNTFGQLGDGSTTSSIIPVAVDLP 403
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 89/316 (28%), Positives = 133/316 (42%), Gaps = 48/316 (15%)
Query: 60 LEDDSKTNHKAPIK--------ICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEG 108
L D + T+ +P+ I +V G SLA+ +AG WG+ L D
Sbjct: 73 LGDGTTTDSSSPVSVNVPAGTTITAVAGGAGHSLAVTSAGTALAWGDNAFGQLGD----- 127
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G ++ SS TP V G TV ++ G H +A+ SAG +WG N GQLG
Sbjct: 128 GTTIPSSSTPVAVDVPAGTTVTALSGGGVHNLAVTSAGT--------ALAWGDNFWGQLG 179
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G S R + N + + V G H+ +T ++ W G +G
Sbjct: 180 DG---STTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAG------TALAW--GDNSSG 228
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG GT + +P ++P + +V G H+ ++S GDV +WG G G + +
Sbjct: 229 QLGDGTATDSSIPVA-ADVPAGTTITAVAAGGLHSLALTSGGDVLAWG-ANGSGQLGDGT 286
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
T + +P+ + + P G VA G H++ VT G L +WG +G LG
Sbjct: 287 TTSSS-----TPVAV--DVPAGTTVT---AVAAGGRHSLAVTSAGDVL-AWGDNTAGQLG 335
Query: 349 TGKTIDFFAPAIVLWP 364
G T P V P
Sbjct: 336 DGSTTHSSTPVAVNVP 351
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 93/227 (40%), Gaps = 35/227 (15%)
Query: 60 LEDDSKTNHKAPIK--------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L D S T + P+ I +V AG SLA+ +AG WG+ S G +
Sbjct: 178 LGDGSTTRSRTPVAVNVPAGTTITAVAAGQGHSLAVTSAGTALAWGDN---SSGQLGDGT 234
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
S P G T+ VA G H +AL S G+ +WGAN +GQLG G
Sbjct: 235 ATDSSIPVAADVPAGTTITAVAAGGLHSLALTSGGD--------VLAWGANGSGQLGDGT 286
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQ 229
S P ++ + V V G H+ +T + + W G+N GQ
Sbjct: 287 TTSSSTPVAVDVPAGTT---VTAVAAGGRHSLAVTSAG------DVLAW----GDNTAGQ 333
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
LG G+T + P V +P + +V G H+ V+S +WG
Sbjct: 334 LGDGSTTHSSTPVAVN-VPAGTTITAVATGSGHSLAVTSTDTALAWG 379
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 89/205 (43%), Gaps = 29/205 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+WG N+ G+LG G P + N + + V G+ H+ +T
Sbjct: 63 LAWGTNSAGRLGDGTTTDSSSPVSV---NVPAGTTITAVAGGAGHSLAVTSAG------T 113
Query: 217 SMCWTFGLGEN--GQLGHGTT-QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
++ W G+N GQLG GTT S+ P V ++P + ++ G H V+SAG
Sbjct: 114 ALAW----GDNAFGQLGDGTTIPSSSTPVAV-DVPAGTTVTALSGGGVHNLAVTSAGTAL 168
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
+WG + G + S TR+ +P+ + N P G VA G H++ VT G
Sbjct: 169 AWG-DNFWGQLGDGSTTRSR-----TPVAV--NVPAGTTIT---AVAAGQGHSLAVTSAG 217
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAP 358
L +WG SG LG G D P
Sbjct: 218 TAL-AWGDNSSGQLGDGTATDSSIP 241
>gi|326671858|ref|XP_685964.5| PREDICTED: hypothetical protein LOC557752 [Danio rerio]
Length = 1413
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 138/307 (44%), Gaps = 54/307 (17%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGH 127
P++I G + + G L+M+G S+ G L + T P+ V
Sbjct: 38 PLRIS---CGDEHTALVTENGKLFMFG------SNNWGQLGLGTKTTVNKPTCVKALKSE 88
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V ACG H + S G Y+ G NN GQLGLGD R ++E FN+
Sbjct: 89 RVKLTACGRTHTLVFTSRGN--------LYACGGNNEGQLGLGDCNDRTSFHLVEFFNKQ 140
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P + + GS +A LT R + +G GQ+G G +AL P++V +
Sbjct: 141 GPIKM--LAAGSNTSAALTQDGR--------LYMWGDNSEGQIGLGKESNALTPQEV-SV 189
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISG 305
+ V+ VS CG +H++ V+ G ++++G + LGL L ++ ++ I
Sbjct: 190 GKRVFWVS--CGYYHSAFVTVDGALYTFGEKDSGKLGLS-TEKLANHKVPQQVTDIP--- 243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
VQVACG HTV +T++ +++S+G G+ G LG G I F + P
Sbjct: 244 --------DRVVQVACGGGHTVALTEN--EVYSFGLGQFGQLGHGTFI--FESRL---PR 288
Query: 366 LTEEFKQ 372
+ E F++
Sbjct: 289 VVEHFRK 295
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 109/233 (46%), Gaps = 39/233 (16%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A GS AL G Y WG N+ GQ+GLG + L P+ + +
Sbjct: 146 LAAGSNTSAALTQDGR--------LYMWGDNSEGQIGLGKESNALTPQEVSVGKR----- 192
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA--LVPEQVKELPQ 249
V+ V+CG +H+A +T ++ +TFG ++G+LG T + A VP+QV ++P
Sbjct: 193 VFWVSCGYYHSAFVT--------VDGALYTFGEKDSGKLGLSTEKLANHKVPQQVTDIPD 244
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V V V CG HT V + +V+S+G+ + G + + + G H
Sbjct: 245 RV--VQVACGGGHT-VALTENEVYSFGLGQ-FGQLGHGTFIFESRLPRVVEHFRKGRVKH 300
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT--IDFFAPAI 360
ACG HT L+TD+G L+++G GR G LG G+ + F P +
Sbjct: 301 ---------AACGENHTALITDNGL-LYTFGDGRHGKLGLGEENFTNQFKPTL 343
>gi|224099911|ref|XP_002311672.1| predicted protein [Populus trichocarpa]
gi|222851492|gb|EEE89039.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 85/307 (27%), Positives = 137/307 (44%), Gaps = 52/307 (16%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF----SLVSSFTPSPV-WDF 124
A I V G + AI +G L+ WG D S G + VS + P V
Sbjct: 315 AVTNIDYVACGEYHTCAISTSGDLFTWG-----DGSNNSGLLGHGTDVSHWIPKRVSGPL 369
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G V+ +ACG+ H S G+ +++G G LG GDR+S PK +++
Sbjct: 370 EGLQVLSIACGTWHSALATSNGK--------LFTFGDGTFGALGHGDRKSVSSPKELQSL 421
Query: 185 NQDSPWAVYEVTCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
N +V CG +HTA + + +++ +T+G G+ +LGHG + L+P
Sbjct: 422 NG---LKTIKVACGVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPT 478
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISP 300
V L Y + + CG T ++++G V++ G LG N + + P
Sbjct: 479 CVSSLIDYNFQ-QLACGHTMTVALTTSGHVFTMGGSAYGQLG---------NPSSNGKIP 528
Query: 301 ILISGNGPHGPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
L+ QD + +++CGA HT ++T ++++WGRG +G LG G T D
Sbjct: 529 CLV----------QDRLVGEFVEEISCGAYHTAVLTSRS-EVFTWGRGANGQLGHGDTED 577
Query: 355 FFAPAIV 361
P +V
Sbjct: 578 RKLPTLV 584
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/289 (25%), Positives = 127/289 (43%), Gaps = 43/289 (14%)
Query: 87 IDNAGALWMWGNC----PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG PD S + TP P+ V +++CG HV +
Sbjct: 221 IESLGDVYIWGEIWSDGVFPDGSVSSVPTKNDVLTPKPLESNVVLDVHQISCGVRHVALV 280
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE ++WG + G+LG G + PK++E+ + + V CG +HT
Sbjct: 281 TRQGE--------VFTWGEESGGRLGHGIEDHFTHPKLVESLAVTN---IDYVACGEYHT 329
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
++ D+ W G +G LGHGT S +P++V + + ++S+ CG +H
Sbjct: 330 CAIS---TSGDLF---TWGDGSNNSGLLGHGTDVSHWIPKRVSGPLEGLQVLSIACGTWH 383
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVAC 321
+++ +S G ++++G + G +L + SP L S NG ++VAC
Sbjct: 384 SALATSNGKLFTFG-DGTFG-----ALGHGDRKSVSSPKELQSLNG------LKTIKVAC 431
Query: 322 GAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT + + KL++WG G LG G + P V
Sbjct: 432 GVWHTAAIVEVMSQSGSNISSRKLFTWGDGDKHRLGHGNKDAYLLPTCV 480
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/178 (27%), Positives = 84/178 (47%), Gaps = 31/178 (17%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D G + + P+ V + ++ACG VAL ++G
Sbjct: 455 LFTWGDG---DKHRLGHGNKDAYLLPTCVSSLIDYNFQQLACGHTMTVALTTSGH----- 506
Query: 153 DLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
++ G + GQLG ++ + +++ F V E++CG++HTA+LT R
Sbjct: 507 ---VFTMGGSAYGQLGNPSSNGKIPCLVQDRLVGEF-------VEEISCGAYHTAVLTSR 556
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NGQLGHG T+ +P V+ L + ++ ++ CG TS +
Sbjct: 557 --------SEVFTWGRGANGQLGHGDTEDRKLPTLVEALKER-HVKNLSCGANFTSSI 605
Score = 47.0 bits (110), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 61/134 (45%), Gaps = 23/134 (17%)
Query: 80 GGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
G M++A+ +G ++ G L + S+ G P V D G V +++CG
Sbjct: 494 GHTMTVALTTSGHVFTMGGSAYGQLGNPSSNGKI-------PCLVQDRLVGEFVEEISCG 546
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H L S E ++WG NGQLG GD E R P ++E + V +
Sbjct: 547 AYHTAVLTSRSE--------VFTWGRGANGQLGHGDTEDRKLPTLVEALKERH---VKNL 595
Query: 196 TCGS-FHTALLTHR 208
+CG+ F +++ H+
Sbjct: 596 SCGANFTSSICIHK 609
>gi|118396198|ref|XP_001030441.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila]
gi|89284744|gb|EAR82778.1| Regulator of chromosome condensation (RCC1) [Tetrahymena thermophila
SB210]
Length = 1984
Score = 85.9 bits (211), Expect = 4e-14, Method: Composition-based stats.
Identities = 75/260 (28%), Positives = 120/260 (46%), Gaps = 39/260 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V VACG +H VA+ AG +WG N++ QLGLG++ P F
Sbjct: 1544 VTSVACGYQHSVAITYAG--------TVLAWGDNSHSQLGLGEKSPSSVP-----FPTPI 1590
Query: 189 P--WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
P + V+CGS HT L + + +++G GE G LGHG P+ ++
Sbjct: 1591 PALTNIQSVSCGSEHTLALDYIGQ--------VFSWGNGEGGLLGHGNEDVCPSPKIIEA 1642
Query: 247 LPQYVYLVSVD---CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
L ++VD CG H+ V++ V+SWG +G L + L NE +P +
Sbjct: 1643 LKG----LNVDFIVCGGLHSLVLTKNRQVYSWGRNEGGQLGIDKKLFTNEKCYLTTPKRV 1698
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
GN + +Q+A G AH++ + +G +++ WG +G +G G D + V
Sbjct: 1699 KGN----LEGVGVIQIAAGEAHSLALALNG-QVYGWGYNMNGQIGLGMQTDTYP---VYE 1750
Query: 364 PPLTEEF-KQDELNTGGLDD 382
P L + K +++ GL+D
Sbjct: 1751 PQLIPKLNKIEKIFCCGLND 1770
Score = 61.6 bits (148), Expect = 9e-07, Method: Composition-based stats.
Identities = 60/214 (28%), Positives = 90/214 (42%), Gaps = 45/214 (21%)
Query: 155 VCYSWGANNNGQLG--LGDRESRLRPKIIETFNQ------DSPWAVYEVTCGSFHTALLT 206
V +SWG N GQ+G +++ L KI F + D+ V V CG H+ +T
Sbjct: 1501 VMFSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDT--IVTSVACGYQHSVAIT 1558
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+ + W G + QLG G + VP +P + SV CG HT +
Sbjct: 1559 YAG------TVLAW--GDNSHSQLGLGEKSPSSVPFPTP-IPALTNIQSVSCGSEHTLAL 1609
Query: 267 SSAGDVWSWGMEKG--LG-----LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
G V+SWG +G LG +CP SP +I F +
Sbjct: 1610 DYIGQVFSWGNGEGGLLGHGNEDVCP-------------SPKIIEALKGLNVDF-----I 1651
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
CG H++++T + +++SWGR G LG K +
Sbjct: 1652 VCGGLHSLVLTKN-RQVYSWGRNEGGQLGIDKKL 1684
Score = 54.3 bits (129), Expect = 1e-04, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 120/310 (38%), Gaps = 69/310 (22%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSP--VWDFH 125
A I SV G +LA+D G ++ WGN EGG PSP +
Sbjct: 1592 ALTNIQSVSCGSEHTLALDYIGQVFSWGN-------GEGGLLGHGNEDVCPSPKIIEALK 1644
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V + CG H + L + YSWG N GQLG+ D++ K T
Sbjct: 1645 GLNVDFIVCGGLHSLVLTKNRQV--------YSWGRNEGGQLGI-DKKLFTNEKCYLTTP 1695
Query: 186 QD-----SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---TQS 237
+ V ++ G H+ L L + +G NGQ+G G T
Sbjct: 1696 KRVKGNLEGVGVIQIAAGEAHSLALA--------LNGQVYGWGYNMNGQIGLGMQTDTYP 1747
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK---GLGLCPNASLTRNEA 294
P+ + +L + + CGL D G+EK + N L + +
Sbjct: 1748 VYEPQLIPKLNKIEKIFC--CGL---------NDSNQLGLEKEPIKITSTTNNILDQYKP 1796
Query: 295 GD---AISPILISGNGPHGPKFQD-----PV-QVACGAAHTV-LVTDDG--YKLWSWGRG 342
D A++ + I PK D PV V+CG H++ LV D Y L++WG
Sbjct: 1797 QDQKRAVTDVFI-------PKKMDCFHQIPVLHVSCGHNHSLALVVADTKHYMLFAWGMH 1849
Query: 343 RSGVLGTGKT 352
+ G LG G+T
Sbjct: 1850 KHGQLGIGET 1859
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 8/93 (8%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ES 174
F P + FH V+ V+CG H +ALV A + + ++WG + +GQLG+G+ ++
Sbjct: 1807 FIPKKMDCFHQIPVLHVSCGHNHSLALVVADTKH----YMLFAWGMHKHGQLGIGETGQN 1862
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
P+ I T+ QD Y + CGS+H+ ++ +
Sbjct: 1863 SSVPRPI-TYLQDV--TTYSMACGSYHSLVVAN 1892
Score = 45.4 bits (106), Expect = 0.065, Method: Composition-based stats.
Identities = 48/181 (26%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 222 FGLGEN--GQLGH-GTTQSALVPEQVK-ELPQYVY------LVSVDCGLFHTSVVSSAGD 271
F G+N GQ+G+ + L+ +++K P+ + + SV CG H+ ++ AG
Sbjct: 1503 FSWGQNTEGQMGNVYDPKQNLLSKKIKVNFPKLIVPLKDTIVTSVACGYQHSVAITYAGT 1562
Query: 272 VWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V +WG + GLG +S+ +PI P + V+CG+ HT+
Sbjct: 1563 VLAWGDNSHSQLGLGEKSPSSVPFP------TPI---------PALTNIQSVSCGSEHTL 1607
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTK 387
+ G +++SWG G G+LG G +P I+ + D + GGL + TK
Sbjct: 1608 ALDYIG-QVFSWGNGEGGLLGHGNEDVCPSPKII---EALKGLNVDFIVCGGLHSLVLTK 1663
Query: 388 D 388
+
Sbjct: 1664 N 1664
>gi|55727310|emb|CAH90411.1| hypothetical protein [Pongo abelii]
Length = 975
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL S G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALASDGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGAGS------YGQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HVREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H ++S G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALASDGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSYGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|270002050|gb|EEZ98497.1| hypothetical protein TcasGA2_TC000997 [Tribolium castaneum]
Length = 1042
Score = 85.9 bits (211), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 27/209 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGH 127
A ++ + AG S+A+ NAG +++WG + + G ++ + TP+ V G
Sbjct: 135 AKYQVVQIAAGQRHSVALTNAGEIFVWG----ANDFGQLGLGTITPYESTPTTVCSLSGI 190
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ACG+ H A+ +G + WG N NGQLGL D S+ P + T
Sbjct: 191 PFALIACGANHTFAVSKSG--------AVFGWGKNINGQLGLNDTVSKKFPTQLRTLRNS 242
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG + LT L+ ++ G G GQLGHG T + ++P QV EL
Sbjct: 243 R---VRFISCGDEFSTFLT--------LDGGVFSCGAGMYGQLGHGGTSNEILPRQVLEL 291
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSW 275
+ + CG H+ + V S G V+S+
Sbjct: 292 MGST-ITQISCGRQHSLAFVPSRGRVYSY 319
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 114/254 (44%), Gaps = 48/254 (18%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
GG FTP + F +V+K A G+ H + L G+ YS G+N+ GQ
Sbjct: 15 GGIEEEHVFTPKALDWFEAKSVMKAALGANHTLFLTKDGKV--------YSCGSNDYGQ- 65
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
LG + R RP+++ + +++ V CG H+ L+ E W G
Sbjct: 66 -LGHDQPRKRPQLVSGLD---AYSIINVACGEMHSLALSRWG------EVFSW--GSDNY 113
Query: 228 GQLGH---GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKG 280
GQLGH GT Q +VP+ +K L +Y +V + G H+ +++AG+++ WG + G
Sbjct: 114 GQLGHQLGGTLQ--IVPKLIKSLAKY-QVVQIAAGQRHSVALTNAGEIFVWGANDFGQLG 170
Query: 281 LG-LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
LG + P S + P + +ACGA HT V+ G ++ W
Sbjct: 171 LGTITPYESTPTTVCSLSGIPFAL---------------IACGANHTFAVSKSG-AVFGW 214
Query: 340 GRGRSGVLGTGKTI 353
G+ +G LG T+
Sbjct: 215 GKNINGQLGLNDTV 228
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 124/297 (41%), Gaps = 44/297 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL--VSSFTPSPVWDFHGHTVVK 131
I +V G M SLA+ G ++ WG+ D+ + G L P + + VV+
Sbjct: 86 IINVACGEMHSLALSRWGEVFSWGS----DNYGQLGHQLGGTLQIVPKLIKSLAKYQVVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H VAL +AGE + WGAN+ GQLGLG P+A
Sbjct: 142 IAAGQRHSVALTNAGE--------IFVWGANDFGQLGLGTITPYESTPTTVCSLSGIPFA 193
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ + CG+ HT ++ + +G NGQLG T S P Q++ L +
Sbjct: 194 L--IACGANHTFAVSK--------SGAVFGWGKNINGQLGLNDTVSKKFPTQLRTL-RNS 242
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + CG ++ ++ G V+S G + G G N L R S I
Sbjct: 243 RVRFISCGDEFSTFLTLDGGVFSCGAGMYGQLGHGGTSNEILPRQVLELMGSTI------ 296
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG H++ +++S+G G +G LG K + P +VL P
Sbjct: 297 ---------TQISCGRQHSLAFVPSRGRVYSYGLGGAGQLGLRKPSNASTPQVVLGP 344
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/198 (31%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 157 YSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ WG+ +G+LGLG + E PK ++ F S V + G+ HT LT
Sbjct: 2 FGWGSTIHGELGLGGIEEEHVFTPKALDWFEAKS---VMKAALGANHTLFLTK------- 51
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ ++ G + GQLGH Q P+ V L Y +++V CG H+ +S G+V+S
Sbjct: 52 -DGKVYSCGSNDYGQLGHD--QPRKRPQLVSGLDAYS-IINVACGEMHSLALSRWGEVFS 107
Query: 275 WGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG + LG +L I P LI K+Q VQ+A G H+V +T+
Sbjct: 108 WGSDNYGQLGHQLGGTL-------QIVPKLIKSLA----KYQ-VVQIAAGQRHSVALTNA 155
Query: 333 GYKLWSWGRGRSGVLGTG 350
G +++ WG G LG G
Sbjct: 156 G-EIFVWGANDFGQLGLG 172
>gi|327261091|ref|XP_003215365.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Anolis
carolinensis]
Length = 530
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/250 (27%), Positives = 108/250 (43%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS HVV GE Y +WG N QLG G
Sbjct: 60 STIVPKKLESLSGKRIRSLSYGSGPHVVLSTEDGEVY--------AWGHNGYSQLGNGTT 111
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ P I+ V EV CGS H+ L+ + + +G GQ+G
Sbjct: 112 NQGVTP--IQVCTNLLIKKVIEVACGSHHSLALSS--------DGDVYAWGYNNCGQVGS 161
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + P +V Q +VS+ CG + + G+V+ WG N L
Sbjct: 162 GSTANQPTPRKVSNCLQTKIVVSIACGQTSSVAIVDNGEVYGWGYNG------NGQLGLG 215
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ ++P ++ + +Q+ACG AHT+ +TD+G ++SWG G LGTG
Sbjct: 216 NNGNQLTPCRVA-----ALQGVCIMQIACGYAHTLALTDEGL-MYSWGANTYGQLGTGNK 269
Query: 353 IDFFAPAIVL 362
+ +P +L
Sbjct: 270 SNQLSPGQIL 279
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 98/223 (43%), Gaps = 38/223 (17%)
Query: 71 PIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPS 119
PI++C+ V G SLA+ + G ++ WG NC G S + TP
Sbjct: 117 PIQVCTNLLIKKVIEVACGSHHSLALSSDGDVYAWGYNNC-----GQVGSGSTANQPTPR 171
Query: 120 PVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
V + VV +ACG VA+V GE Y WG N NGQLGLG+ ++L P
Sbjct: 172 KVSNCLQTKIVVSIACGQTSSVAIVDNGEV--------YGWGYNGNGQLGLGNNGNQLTP 223
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + ++ CG HT LT E + +++G GQLG G +
Sbjct: 224 CRVAALQ---GVCIMQIACGYAHTLALTD--------EGLMYSWGANTYGQLGTGNKSNQ 272
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + +G V+ WG +G
Sbjct: 273 LSPGQILMEKERVVEIAA-CHSAHTSAAKTQSGLVYMWGQCRG 314
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 89/335 (26%), Positives = 141/335 (42%), Gaps = 53/335 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+ S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 75 IRSLSYGSGPHVVLSTED-GEVYAWGHNGYSQLGNGTTNQGVTPIQVCTNLLI-----KK 128
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL S G+ Y +WG NN GQ+G G ++ P+ + Q
Sbjct: 129 VIEVACGSHHSLALSSDGDVY--------AWGYNNCGQVGSGSTANQPTPRKVSNCLQTK 180
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G + L P +V L
Sbjct: 181 --IVVSIACGQTSSVAIV------DNGEVYGW--GYNGNGQLGLGNNGNQLTPCRVAAL- 229
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q V ++ + CG HT ++ G ++SWG L + +SP G
Sbjct: 230 QGVCIMQIACGYAHTLALTDEGLMYSWGAN------TYGQLGTGNKSNQLSP------GQ 277
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT ++ WG RG+S VL T F+
Sbjct: 278 ILMEKERVVEIAACHSAHTSAAKTQSGLVYMWGQCRGQSVVLPHVTHFSCTDDVFACFST 337
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEI---KTKDLE 390
V+W L+ E + T L E +T DL+
Sbjct: 338 PAVMWRLLSVEHEDFLTVTESLKREFDSPETSDLK 372
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS +VP++++ L + + +S G H + + G+V++WG
Sbjct: 43 FVFGLNCSNCLGTGDNQSTIVPKKLESLSGKRIRSLSYGSGP-HVVLSTEDGEVYAWGHN 101
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L ++PI + N + ++VACG+ H++ ++ DG +++
Sbjct: 102 G------YSQLGNGTTNQGVTPIQVCTN----LLIKKVIEVACGSHHSLALSSDG-DVYA 150
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 151 WGYNNCGQVGSGSTANQPTPRKV 173
>gi|281207411|gb|EFA81594.1| hypothetical protein PPL_05585 [Polysphondylium pallidum PN500]
Length = 624
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 110/244 (45%), Gaps = 41/244 (16%)
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
P G V +ACG H +A++ D SWG N GQLGLGD+ +R P
Sbjct: 131 PTLIKQGLIVSMIACGDSHALAVLP-------NDATVLSWGCNRWGQLGLGDQVNRCHPT 183
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
I +Q P V+ V GS H+ +L+ ++FG G G+LGHG +
Sbjct: 184 PISGLSQSIP--VF-VAAGSQHSFVLSKFGE--------LFSFGCGTFGRLGHGNELPSF 232
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL-TRNEA 294
P + L ++VSV GL H++ V S G +++WG + GLG +L +N+
Sbjct: 233 NPRPISTLVGK-HIVSVAAGLMHSAAVDSQGALYTWGWNRYGQLGLGTVKKHTLPNKNKE 291
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+ + V+V CG HT+++ +G+ ++S+G G LG G D
Sbjct: 292 LERF----------------NIVKVVCGKNHTLVLDVNGH-VYSFGFNVCGQLGIGSYTD 334
Query: 355 FFAP 358
P
Sbjct: 335 SIKP 338
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 113/277 (40%), Gaps = 39/277 (14%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WG L D V+ P+P+ V VA GS+H L GE
Sbjct: 168 WGQLGLGDQ--------VNRCHPTPISGLSQSIPVFVAAGSQHSFVLSKFGE-------- 211
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
+S+G G+LG G+ P+ I T + V G H+A +
Sbjct: 212 LFSFGCGTFGRLGHGNELPSFNPRPISTL---VGKHIVSVAAGLMHSAAVDS-------- 260
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ +T+G GQLG GT + +P + KEL ++ +V V CG HT V+ G V+S+
Sbjct: 261 QGALYTWGWNRYGQLGLGTVKKHTLPNKNKELERF-NIVKVVCGKNHTLVLDVNGHVYSF 319
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G +C L D+I P I + + D +A G H +L+T G
Sbjct: 320 GFN----VC--GQLGIGSYTDSIKPNRIDLDLKQNDEIID---IAAGYYHVLLLTKKGC- 369
Query: 336 LWSWGRGRSGVLGTGKTIDFFA-PAIVLWPPLTEEFK 371
++S+G G LG G + + P ++ + EF
Sbjct: 370 VYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFN 406
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 103/251 (41%), Gaps = 51/251 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKV 132
I SV AG M S A+D+ GAL+ WG + + G V T P+ + +VKV
Sbjct: 245 IVSVAAGLMHSAAVDSQGALYTWG----WNRYGQLGLGTVKKHTLPNKNKELERFNIVKV 300
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CG H + L G YS+G N GQLG+G ++P I+ + +
Sbjct: 301 VCGKNHTLVLDVNGH--------VYSFGFNVCGQLGIGSYTDSIKPNRID-LDLKQNDEI 351
Query: 193 YEVTCGSFHTALLT-----------------------HRKRP------------NDMLES 217
++ G +H LLT H+ RP ND ++S
Sbjct: 352 IDIAAGYYHVLLLTKKGCVYSFGYISDGALGLGDVVGHQSRPKLMPFSHFNHEFNDSIDS 411
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV--YLVSVDCGLFHTSVVSSAGDVWSW 275
+G + +A +P +V EL + V + G +H+++++S+G ++++
Sbjct: 412 YKEIYGEYNSDSENDINNNNAKLPPKVVELHNEIGDVAVKIAAGGWHSAIITSSGRLYTF 471
Query: 276 GMEKGLGLCPN 286
G+ L N
Sbjct: 472 GLGDNFRLGNN 482
>gi|357520085|ref|XP_003630331.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355524353|gb|AET04807.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 371
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 101/210 (48%), Gaps = 26/210 (12%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRP 211
++VC SWG +GQLG GD + RL P + F+ QD + VTCG+ +T + K
Sbjct: 123 NVVC-SWGRGEDGQLGHGDTDDRLLPTKLSAFDGQD----IVSVTCGADYT--VARSKSG 175
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
D+ +++G G+ G+LGHG +P ++ L Q + + + CG H V+
Sbjct: 176 KDV-----YSWGWGDFGRLGHGDPSDLFIPHPIRAL-QGLRIKQISCGDCHCLAVTMENK 229
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V SWG + N L D+ P I G + + VA GA H+V +T+
Sbjct: 230 VLSWGRNQ------NGELGLGTTKDSHVPQKILAF--EGIRIK---MVAAGAEHSVAITE 278
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG L+ WG GR G LG G T D P V
Sbjct: 279 DG-DLYGWGWGRYGNLGLGDTNDRLIPEKV 307
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 111/246 (45%), Gaps = 36/246 (14%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ + F G +V V CG+++ VA +G+ YSWG + G+LG GD
Sbjct: 147 PTKLSAFDGQDIVSVTCGADYTVARSKSGKD-------VYSWGWGDFGRLGHGDPSDLFI 199
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P I + +++CG H +T +E+ ++G +NG+LG GTT+
Sbjct: 200 PHPIRALQG---LRIKQISCGDCHCLAVT--------MENKVLSWGRNQNGELGLGTTKD 248
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAG 295
+ VP+++ + + + V G H+ ++ GD+ W WG LGL +
Sbjct: 249 SHVPQKILAF-EGIRIKMVAAGAEHSVAITEDGDLYGWGWGRYGNLGL--------GDTN 299
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
D + P ++ +G V V+CG HT+ ++ G L++ G + G LG G D
Sbjct: 300 DRLIPEKVNIDG------DKIVMVSCGWRHTISISSSG-GLYTHGWSKYGQLGHGDFEDC 352
Query: 356 FAPAIV 361
P V
Sbjct: 353 LVPRKV 358
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 88/209 (42%), Gaps = 29/209 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGA---LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I SV G ++A +G W WG D G F P P+ G +
Sbjct: 158 IVSVTCGADYTVARSKSGKDVYSWGWG-----DFGRLGHGDPSDLFIPHPIRALQGLRIK 212
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++CG H +A+ + SWG N NG+LGLG + P+ I F
Sbjct: 213 QISCGDCHCLAVTMENKVL--------SWGRNQNGELGLGTTKDSHVPQKILAFEGIR-- 262
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ V G+ H+ +T + + +G G G LG G T L+PE+V
Sbjct: 263 -IKMVAAGAEHSVAITE--------DGDLYGWGWGRYGNLGLGDTNDRLIPEKVNIDGDK 313
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +VS CG HT +SS+G +++ G K
Sbjct: 314 IVMVS--CGWRHTISISSSGGLYTHGWSK 340
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 74/177 (41%), Gaps = 25/177 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVV 130
++I + G LA+ + WG + + E G S P + F G +
Sbjct: 209 LRIKQISCGDCHCLAVTMENKVLSWGR----NQNGELGLGTTKDSHVPQKILAFEGIRIK 264
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA G+EH VA+ G+ Y WG G LGLGD RL P E N D
Sbjct: 265 MVAAGAEHSVAITEDGD--------LYGWGWGRYGNLGLGDTNDRLIP---EKVNIDGD- 312
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ V+CG HT ++ +T G + GQLGHG + LVP +V+ L
Sbjct: 313 KIVMVSCGWRHTISISS--------SGGLYTHGWSKYGQLGHGDFEDCLVPRKVQAL 361
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/152 (32%), Positives = 74/152 (48%), Gaps = 14/152 (9%)
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG- 270
N + ++ ++G GE+GQLGHG T L+P ++ +VSV CG +T S +G
Sbjct: 118 NQVSGNVVCSWGRGEDGQLGHGDTDDRLLPTKLSAFDGQ-DIVSVTCGADYTVARSKSGK 176
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
DV+SWG L + D P I G + + Q++CG H + VT
Sbjct: 177 DVYSWGWGD------FGRLGHGDPSDLFIPHPI--RALQGLRIK---QISCGDCHCLAVT 225
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ K+ SWGR ++G LG G T D P +L
Sbjct: 226 MEN-KVLSWGRNQNGELGLGTTKDSHVPQKIL 256
>gi|118398943|ref|XP_001031798.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89286132|gb|EAR84135.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 443
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 139/317 (43%), Gaps = 55/317 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V+AG +S+A+ + G ++ WG E S + P + G + ++
Sbjct: 83 KIKKVEAGKSISMALTHNGEVYSWGKNKGGILGHEDRLSFNMT-QPERIEKLLGKKIKQI 141
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD---RESRLRPK---IIETFNQ 186
+CG H+ A+ GE Y+WG G+LG + +E +++ K + + Q
Sbjct: 142 SCGQFHMAAVTEDGE--------VYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQ 193
Query: 187 DS--PWAV--------YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
DS P + +V CG T +L+ + +TFG + G LG+ + Q
Sbjct: 194 DSMLPQKIESLGNIKAKQVACGIQFTVVLSE--------DGKVYTFGYNQYGSLGYVSDQ 245
Query: 237 SAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+++ P+ +K+L +V + G + ++ G +++WG + N L +++
Sbjct: 246 NSVTTPQLIKDLND---IVKISAGYSFCAAITKQGKLYTWGNNR------NGQLGNSQSL 296
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
P +++G G V V+CG +T G +L++WG G G LG G D
Sbjct: 297 YQTKPSIVTGFGSQ----NSIVDVSCGDNFIAALTQQG-QLYTWGFGGDGQLGHGNKSDL 351
Query: 356 FAPAIVLWPPLTEEFKQ 372
+AP V EFKQ
Sbjct: 352 YAPRHV-------EFKQ 361
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 126/320 (39%), Gaps = 53/320 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTE-------------GGFS---LVSSF 116
KI + G A+ G ++ WGN E G S L S
Sbjct: 137 KIKQISCGQFHMAAVTEDGEVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSM 196
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG-LGDRESR 175
P + +VACG + V L ED Y++G N G LG + D+ S
Sbjct: 197 LPQKIESLGNIKAKQVACGIQFTVVL--------SEDGKVYTFGYNQYGSLGYVSDQNSV 248
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P++I+ N + +++ G A +T + + +T+G NGQLG+ +
Sbjct: 249 TTPQLIKDLND-----IVKISAGYSFCAAITKQGK--------LYTWGNNRNGQLGNSQS 295
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
P V +V V CG + ++ G +++W G + L
Sbjct: 296 LYQTKPSIVTGFGSQNSIVDVSCGDNFIAALTQQGQLYTW------GFGGDGQLGHGNKS 349
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
D +P H Q +++ACG +H +T+D +L+ +GRG G LG G+ +
Sbjct: 350 DLYAP-------RHVEFKQKIIKIACGGSHAAFITEDN-QLYQFGRGSEGQLGIGQNVAS 401
Query: 356 FAPAIVLWPPLTEEFKQDEL 375
A +I P L + FK ++
Sbjct: 402 EA-SIRSTPNLVQYFKGKQV 420
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 118/284 (41%), Gaps = 46/284 (16%)
Query: 58 DSLEDD---SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
D L+D K IK V G ++ + G ++ +G + G VS
Sbjct: 190 DYLQDSMLPQKIESLGNIKAKQVACGIQFTVVLSEDGKVYTFG------YNQYGSLGYVS 243
Query: 115 S----FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
TP + D + +VK++ G A+ G+ Y+WG N NGQLG
Sbjct: 244 DQNSVTTPQLIKDLN--DIVKISAGYSFCAAITKQGK--------LYTWGNNRNGQLGNS 293
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ +P I+ F S ++ +V+CG A LT + +T+G G +GQL
Sbjct: 294 QSLYQTKPSIVTGFG--SQNSIVDVSCGDNFIAALTQ--------QGQLYTWGFGGDGQL 343
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNAS 288
GHG P V E Q + + + CG H + ++ ++ +G E LG+ N +
Sbjct: 344 GHGNKSDLYAPRHV-EFKQKI--IKIACGGSHAAFITEDNQLYQFGRGSEGQLGIGQNVA 400
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
+EA +P L+ K + V V CG HT+ +T +
Sbjct: 401 ---SEASIRSTPNLV-----QYFKGKQVVDVTCGGEHTIAITQE 436
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 58/269 (21%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES- 174
+TP+ + + KV G +AL GE YSWG N G LG DR S
Sbjct: 71 YTPTEIEVLTDKKIKKVEAGKSISMALTHNGE--------VYSWGKNKGGILGHEDRLSF 122
Query: 175 -RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+P+ IE + +++CG FH A +T + +T+G E G+LGH
Sbjct: 123 NMTQPERIEKL---LGKKIKQISCGQFHMAAVTE--------DGEVYTWGNKEFGKLGHE 171
Query: 234 TT-------------------QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
Q +++P++++ L + V CG+ T V+S G V++
Sbjct: 172 EELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGN-IKAKQVACGIQFTVVLSEDGKVYT 230
Query: 275 WGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
+G + LG + + +P LI D V+++ G + +T
Sbjct: 231 FGYNQYGSLGYVSDQN-------SVTTPQLI-------KDLNDIVKISAGYSFCAAITKQ 276
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G KL++WG R+G LG +++ P+IV
Sbjct: 277 G-KLYTWGNNRNGQLGNSQSLYQTKPSIV 304
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 33/211 (15%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ + YSWG GQLGL + + P IE + +V G + LTH
Sbjct: 48 ETIVYSWGYGGFGQLGLQNENNYYTPTEIEVLTDKK---IKKVEAGKSISMALTHNGE-- 102
Query: 213 DMLESMCWTFGLGENGQLGHGTTQS--ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+++G + G LGH S PE++++L + + CG FH + V+ G
Sbjct: 103 ------VYSWGKNKGGILGHEDRLSFNMTQPERIEKLLG-KKIKQISCGQFHMAAVTEDG 155
Query: 271 DVWSWGMEKGLGL-------------CPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
+V++WG ++ L +L+ + D++ P I G K
Sbjct: 156 EVYTWGNKEFGKLGHEEELKQEQKIKIKRGNLSHDYLQDSMLPQKIESLGNIKAK----- 210
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
QVACG TV++++DG K++++G + G LG
Sbjct: 211 QVACGIQFTVVLSEDG-KVYTFGYNQYGSLG 240
>gi|55832768|gb|AAV66897.1| truncated HERC6 [Homo sapiens]
Length = 322
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G + +WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRVF--------AWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L A RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQL---ALSGRNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + K V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGA-----LKNLGVVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 79/192 (41%), Gaps = 28/192 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G ++ WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTSF--------GWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCG 259
V +DCG
Sbjct: 286 DGLVS--QIDCG 295
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
L + + +V + CG HT+V++ G V+++G
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFG 261
>gi|297815950|ref|XP_002875858.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297321696|gb|EFH52117.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 962
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 93/335 (27%), Positives = 141/335 (42%), Gaps = 75/335 (22%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSP--VWDFHGHTVV 130
S+ G ++ + G L+ WG E G L V S+ P P + +F G TV
Sbjct: 308 SISCGTNYAVLVTKQGQLYSWGE--------ESGGRLGHGVCSYVPHPKLIDEFDGSTVE 359
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
CG H A+ ++G DL + G +N G LGLG S +P + Q
Sbjct: 360 LADCGEFHTCAVTTSG------DLYAWGDGDHNAGLLGLGSGASHWKP--VRILGQMEGI 411
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++CG +HTA +T + +TFG G G LGHG S +P +V+ L
Sbjct: 412 NVRTISCGPWHTAFVTSAGK--------LFTFGDGTFGALGHGDRISTNIPREVEAL-NG 462
Query: 251 VYLVSVDCGLFHTSVV-------SSAGDVWSW--GMEKGLG-------LCP-------NA 287
+ CG++H++ V SS+G +++W G + LG L P
Sbjct: 463 CRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDGDDGKLGHGDIASRLIPLSVTELDTT 522
Query: 288 SLTRNEAGDAISPIL-ISGN----GPHGPKFQDPV----------------QVACGAAHT 326
S + G +I+ L +SG G P D V +VACG H
Sbjct: 523 SFQQVACGQSITVALSMSGQVYAMGTADPSQDDVVRAPSCIEGGLGKSFVQEVACGYHH- 581
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ V + ++++WG+G +G LG G T P +V
Sbjct: 582 IAVLNSKAEVYTWGKGSNGQLGHGDTEYRRMPTLV 616
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 106/259 (40%), Gaps = 40/259 (15%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+ SF P + ++CG+ + V + G+ YSWG + G+LG G
Sbjct: 289 MTDSFLPKVLKSHVALDAQSISCGTNYAVLVTKQGQ--------LYSWGEESGGRLGHGV 340
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I+ F+ + V CG FHT +T D+ W G G LG
Sbjct: 341 CSYVPHPKLIDEFDGST---VELADCGEFHTCAVT---TSGDL---YAWGDGDHNAGLLG 391
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G+ S P ++ + + + ++ CG +HT+ V+SAG ++++G + +
Sbjct: 392 LGSGASHWKPVRILGQMEGINVRTISCGPWHTAFVTSAGKLFTFG---------DGTFGA 442
Query: 292 NEAGDAISPILISGNGPHGPKFQD---PVQVACGAAHTVLV------TDDGYKLWSWGRG 342
GD IS N P + + ++ ACG H+ V KL++WG G
Sbjct: 443 LGHGDRIST-----NIPREVEALNGCRTIRTACGVWHSAAVVSVFGEASSSGKLFTWGDG 497
Query: 343 RSGVLGTGKTIDFFAPAIV 361
G LG G P V
Sbjct: 498 DDGKLGHGDIASRLIPLSV 516
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 94/241 (39%), Gaps = 60/241 (24%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G + + +AG L+ +G+ G +S+ P V +G ++
Sbjct: 411 INVRTISCGPWHTAFVTSAGKLFTFGDGTF---GALGHGDRISTNIPREVEALNGCRTIR 467
Query: 132 VACGSEHVVALVSA-GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS-- 188
ACG H A+VS GE L ++WG ++G+LG GD SRL P + + S
Sbjct: 468 TACGVWHSAAVVSVFGEASSSGKL--FTWGDGDDGKLGHGDIASRLIPLSVTELDTTSFQ 525
Query: 189 -------------------------------------------PWAVYEVTCGSFHTALL 205
V EV CG H A+L
Sbjct: 526 QVACGQSITVALSMSGQVYAMGTADPSQDDVVRAPSCIEGGLGKSFVQEVACGYHHIAVL 585
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+ + +T+G G NGQLGHG T+ +P VK L + + V CG +T+
Sbjct: 586 NSK--------AEVYTWGKGSNGQLGHGDTEYRRMPTLVKAL-KGKQVRKVVCGSNYTAT 636
Query: 266 V 266
+
Sbjct: 637 I 637
>gi|222632434|gb|EEE64566.1| hypothetical protein OsJ_19418 [Oryza sativa Japonica Group]
Length = 1002
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 40/294 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
+ G + + +G L+ WG+ ++ G + VS + P V G V+ VACG
Sbjct: 282 IACGEFHTCVVTASGDLYDWGDGSY-NAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACG 340
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S H +S+G+ +++G G LG GDRES PK +E S + +V
Sbjct: 341 SWHSALTMSSGK--------LFTFGDGTFGSLGHGDRESVAYPKEVEAL---SGFRAMKV 389
Query: 196 TCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +H+A + + + + +T+G G+ +LGHG ++ LVP V+ L + +
Sbjct: 390 ACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHNFH 449
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG T ++++G V++ G N N D P ++
Sbjct: 450 -QVACGHSMTVALATSGHVFTMG-------SSNNGQLGNPKADGKQPCMV---------- 491
Query: 314 QDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CG+ H +T ++++WG G +G LG G D P +V
Sbjct: 492 QDKLGNELVEEISCGSNHVAALTSRS-EVYTWGMGANGRLGHGSVEDKKKPTLV 544
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 106/242 (43%), Gaps = 41/242 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ACGS H+ GE + +WG G+LG G RPK++E+ +
Sbjct: 229 QIACGSRHIGLTTRQGEVF--------TWGEELGGRLGHGTDTDICRPKLVESLAVSN-- 278
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + CG FHT ++T D+ + W G G LGHGT S +P++V +
Sbjct: 279 -VEYIACGEFHTCVVT---ASGDLYD---WGDGSYNAGLLGHGTGVSHWLPKRVSGPLEG 331
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ ++SV CG +H+++ S+G ++++ G LG S+ + +A+S
Sbjct: 332 LQVLSVACGSWHSALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF------- 384
Query: 309 HGPKFQDPVQVACGAAHTVLVTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPA 359
++VACG H+ + + KL++WG G LG G P
Sbjct: 385 ------RAMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPT 438
Query: 360 IV 361
V
Sbjct: 439 CV 440
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D + G + P+ V H +VACG VAL ++G +
Sbjct: 415 LFTWGD---GDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVF--- 468
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ G++NNGQLG + + +P +++ ++ V E++CGS H A LT R
Sbjct: 469 -----TMGSSNNGQLGNPKADGK-QPCMVQ--DKLGNELVEEISCGSNHVAALTSR---- 516
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G+G NG+LGHG+ + P V L ++ S+ CG T+ +
Sbjct: 517 ----SEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR-HVKSISCGSNFTTCI 565
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 28/260 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ SV G S ++G L+ +G+ + G S P V G +K
Sbjct: 332 LQVLSVACGSWHSALTMSSGKLFTFGDGTF---GSLGHGDRESVAYPKEVEALSGFRAMK 388
Query: 132 VACGSEHVVALV--SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H A+V S + ++WG + +LG GD+E++L P ++ +
Sbjct: 389 VACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHN- 447
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
++V CG T L +T G NGQLG+ P V++
Sbjct: 448 --FHQVACGHSMTVALA--------TSGHVFTMGSSNNGQLGNPKADGKQ-PCMVQDKLG 496
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + CG H + ++S +V++WGM N L D P L+
Sbjct: 497 NELVEEISCGSNHVAALTSRSEVYTWGMG------ANGRLGHGSVEDKKKPTLVD----- 545
Query: 310 GPKFQDPVQVACGAAHTVLV 329
K + ++CG+ T +
Sbjct: 546 ALKDRHVKSISCGSNFTTCI 565
>gi|348508280|ref|XP_003441682.1| PREDICTED: leucine-rich repeat and WD repeat-containing protein
KIAA1239-like [Oreochromis niloticus]
Length = 2697
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 137/308 (44%), Gaps = 56/308 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV----SSFTPSPVWDFHGHTV 129
+ ++ G LA+ +G ++ WG + +G L+ SS PS V +
Sbjct: 1763 VVAMACGQDHCLAVSASGHVFSWG------AGEDGQLGLLPTPSSSHRPSKVPIPLPIPI 1816
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++VACG+ H +AL G+ + SWG N++GQLGLG + P II +
Sbjct: 1817 IQVACGNSHSLALTKGGDVF--------SWGLNSHGQLGLGKEVPVQHTPVIICAL---A 1865
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG------HGTTQSALVPE 242
AV ++ G H+ LT L + + G + GQLG G +VP
Sbjct: 1866 GVAVTQIAAGGTHSLFLT--------LADLVYCCGANKCGQLGVNRVDEKGRFNICMVPA 1917
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
P V +S CG H++V++ G V+++G L + + + + P L
Sbjct: 1918 L---RPLSVSFIS--CGESHSAVLTKDGKVYTFGDGS------QGQLGHSTSANEVKPKL 1966
Query: 303 ISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++G +GP Q+ACG HT+++ G +LW++G G G G G P +V
Sbjct: 1967 VAGLDGPAS-------QIACGRHHTLVLGSSG-QLWAFGSGAKGQTGNGHNDSCLTPTLV 2018
Query: 362 LWPPLTEE 369
+P T++
Sbjct: 2019 QFPWTTDD 2026
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 108/248 (43%), Gaps = 43/248 (17%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG L+P P S SK PI I V G SLA+ G
Sbjct: 1790 DGQLG------LLP----------TPSSSHRPSKVPIPLPIPIIQVACGNSHSLALTKGG 1833
Query: 92 ALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
++ WG L G G + TP + G V ++A G H + L A
Sbjct: 1834 DVFSWG---LNSHGQLGLGKEVPVQHTPVIICALAGVAVTQIAAGGTHSLFLTLA----- 1885
Query: 151 GEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
DLV Y GAN GQLG+ D + R ++ P +V ++CG H+A+LT
Sbjct: 1886 --DLV-YCCGANKCGQLGVNRVDEKGRFNICMVPALR---PLSVSFISCGESHSAVLTK- 1938
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ +TFG G GQLGH T+ + + P+ V L ++ CG HT V+ S
Sbjct: 1939 -------DGKVYTFGDGSQGQLGHSTSANEVKPKLVAGLDGPASQIA--CGRHHTLVLGS 1989
Query: 269 AGDVWSWG 276
+G +W++G
Sbjct: 1990 SGQLWAFG 1997
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/345 (25%), Positives = 143/345 (41%), Gaps = 86/345 (24%)
Query: 63 DSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV- 121
D + PI+ +GG M L + WG+ S+ G F ++ PSPV
Sbjct: 1663 DVTVDEDEPIRCWEDPSGGDMQL--------FCWGD------SSSGQFGPQAA--PSPVS 1706
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
W G + K+ CG H + L + G S G N+ GQLG R+ + KII
Sbjct: 1707 WTVPG-VITKICCGDRHTLFLNADGNVL--------SCGHNSQGQLG---RQKKKNGKII 1754
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH-GTTQSALV 240
++ +V + CG H ++ +++G GE+GQLG T S+
Sbjct: 1755 AQV--EALGSVVAMACGQDHCLAVS--------ASGHVFSWGAGEDGQLGLLPTPSSSHR 1804
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG-----------LCP 285
P +V + ++ V CG H+ ++ GDV+SWG+ + GLG +C
Sbjct: 1805 PSKVPIP-LPIPIIQVACGNSHSLALTKGGDVFSWGLNSHGQLGLGKEVPVQHTPVIICA 1863
Query: 286 NA--SLTRNEAGDAISPILISGN----------GPHGPKFQD--------------PVQV 319
A ++T+ AG S L + G G D P+ V
Sbjct: 1864 LAGVAVTQIAAGGTHSLFLTLADLVYCCGANKCGQLGVNRVDEKGRFNICMVPALRPLSV 1923
Query: 320 ---ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+CG +H+ ++T DG K++++G G G LG + + P +V
Sbjct: 1924 SFISCGESHSAVLTKDG-KVYTFGDGSQGQLGHSTSANEVKPKLV 1967
>gi|405954128|gb|EKC21651.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 826
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 79/279 (28%), Positives = 124/279 (44%), Gaps = 38/279 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK 131
KI S K SLA+ G ++ WG+ D G + + P V G V
Sbjct: 483 KISSSKGSDGHSLALTTTGEVYSWGD---GDYGKLGHGTHSTQKIPKLVKGPLVGKVVKC 539
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+ G H A+ GE Y+WG G+LG S+ P +++ +
Sbjct: 540 VSAGYRHSAAVTEDGE--------LYTWGDGEFGRLGHDYTSSKNFPTKVQSIE-----S 586
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V CG HT ++ + W+FG GENG+LGHG T L P+ ++ L +
Sbjct: 587 VGLVACGGSHTLAVSQDGK-------TIWSFGGGENGKLGHGDTNRQLKPKVIEAL-NGL 638
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
Y+ V CG + V+S+G +++WG LG C +A T A+ P L+
Sbjct: 639 YIRKVACGSQSSLAVTSSGQLYAWGCGAILG-CGSAEYT------ALRPRLV-----EDL 686
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + V +ACG +H + +T + ++++WG G G G
Sbjct: 687 QSKRMVDIACGDSHVIALTHES-EVYAWGNNAMGQCGQG 724
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 89/203 (43%), Gaps = 24/203 (11%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD + PK F++ + H+ LT
Sbjct: 453 GKGSYGRLGLGDSNNCSVPKK-PLFDKKYVKKISSSKGSDGHSLALTTTGE--------V 503
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHGT + +P+ VK + V G H++ V+ G++++WG
Sbjct: 504 YSWGDGDYGKLGHGTHSTQKIPKLVKGPLVGKVVKCVSAGYRHSAAVTEDGELYTWG--- 560
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWS 338
E G S N P + + V VACG +HT+ V+ DG +WS
Sbjct: 561 -----------DGEFGRLGHDYTSSKNFPTKVQSIESVGLVACGGSHTLAVSQDGKTIWS 609
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
+G G +G LG G T P ++
Sbjct: 610 FGGGENGKLGHGDTNRQLKPKVI 632
>gi|449680679|ref|XP_002161042.2| PREDICTED: uncharacterized protein LOC100209924 [Hydra
magnipapillata]
Length = 809
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 125/294 (42%), Gaps = 39/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNC-PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ I V + S ++ +G L+ +G P +TE V P V DF +
Sbjct: 458 VNITFVSCNELHSASVTESGELYTFGRSGPHLGYTTEDRKQAV----PRKV-DFSTANKI 512
Query: 131 K-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
K V+CG E +AL S GE Y S+G N+ GQLG G P +I+ N
Sbjct: 513 KAVSCGLEFTIALNSEGELY--------SFGKNDCGQLGAGHFNDIEEPYLIKHLN---G 561
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ +V+CGS H +T + W +G E GQLG ++ +P +
Sbjct: 562 VRISKVSCGSKHVGAVT--------VNGDVWLWGSNEFGQLGTDKLEAHDIPFEAPSTFW 613
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNG 307
+ + CG HT V+S G V+ +G + LG+ N + SP + +
Sbjct: 614 NEEIQDIKCGGSHTVVLSCTGVVYVFGNGQSGQLGVAVNQT----------SPYITNPCI 663
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P +V CG HT VT+ G L++WG G G LG G D + P +V
Sbjct: 664 LSMPNNTKIAKVDCGIEHTAAVTESGC-LYTWGNGSRGRLGHGDHQDRYVPTLV 716
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 114/267 (42%), Gaps = 40/267 (14%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF 124
K + KI +V G ++A+++ G L+ +G D G P +
Sbjct: 503 KVDFSTANKIKAVSCGLEFTIALNSEGELYSFGK---NDCGQLGAGHFNDIEEPYLIKHL 559
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
+G + KV+CGS+HV A+ G+ + WG+N GQLG E+ P F
Sbjct: 560 NGVRISKVSCGSKHVGAVTVNGDVW--------LWGSNEFGQLGTDKLEAHDIP-----F 606
Query: 185 NQDSPW---AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA--L 239
S + + ++ CG HT +L+ + + FG G++GQLG Q++ +
Sbjct: 607 EAPSTFWNEEIQDIKCGGSHTVVLS--------CTGVVYVFGNGQSGQLGVAVNQTSPYI 658
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
+ +P + VDCG+ HT+ V+ +G +++WG L + D
Sbjct: 659 TNPCILSMPNNTKIAKVDCGIEHTAAVTESGCLYTWGNG------SRGRLGHGDHQDRYV 712
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHT 326
P L+ ++ +ACGA HT
Sbjct: 713 PTLV-----ESLAYKQVQSIACGAYHT 734
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 93/218 (42%), Gaps = 29/218 (13%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L G + +E+ H ++I V G A+ G +W+WG+ T+ +
Sbjct: 542 LGAGHFNDIEEPYLIKHLNGVRISKVSCGSKHVGAVTVNGDVWLWGSNEFGQLGTDKLEA 601
Query: 112 LVSSF-TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
F PS W+ + + CG H V L G V Y +G +GQLG+
Sbjct: 602 HDIPFEAPSTFWN---EEIQDIKCGGSHTVVLSCTG--------VVYVFGNGQSGQLGVA 650
Query: 171 DRESR---LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGE 226
++ P I+ N + +V CG HTA +T ES C +T+G G
Sbjct: 651 VNQTSPYITNPCILSMPNNTK---IAKVDCGIEHTAAVT---------ESGCLYTWGNGS 698
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
G+LGHG Q VP V+ L Y + S+ CG +HT+
Sbjct: 699 RGRLGHGDHQDRYVPTLVESLA-YKQVQSIACGAYHTA 735
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 95/206 (46%), Gaps = 26/206 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+WGA+ G LG G+ L P+++E +D + V CG+ HT ++ +
Sbjct: 376 YTWGASPKGVLGHGEETEELFPRVVEALLGRD----IRTVACGTEHTLAVS--------V 423
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+++G G G+LG +P ++ + V + V C H++ V+ +G+++++
Sbjct: 424 NGEMFSWGCGRGGKLGLKNILDRYMPLKIGAF-ENVNITFVSCNELHSASVTESGELYTF 482
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G P+ T + A+ P + + + K V+CG T+ + +G +
Sbjct: 483 GRSG-----PHLGYTTEDRKQAV-PRKVDFSTANKIK-----AVSCGLEFTIALNSEG-E 530
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
L+S+G+ G LG G D P ++
Sbjct: 531 LYSFGKNDCGQLGAGHFNDIEEPYLI 556
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL--VSSFTPSP-VWDFHGHT- 128
+I +K GG ++ + G ++++GN S + G ++ S + +P + +T
Sbjct: 616 EIQDIKCGGSHTVVLSCTGVVYVFGN----GQSGQLGVAVNQTSPYITNPCILSMPNNTK 671
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ KV CG EH A+ +G Y+WG + G+LG GD + R P ++E+ +
Sbjct: 672 IAKVDCGIEHTAAVTESG--------CLYTWGNGSRGRLGHGDHQDRYVPTLVESL---A 720
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG++HTA R +D C
Sbjct: 721 YKQVQSIACGAYHTAACVIRAWVHDQETKSC 751
>gi|426344974|ref|XP_004039178.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Gorilla
gorilla gorilla]
Length = 982
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 113/246 (45%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGTHSFALSLCGTSFGWGSNSAGQLALSG---RNVPA 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ I G V ++CG HT ++T DG K++++G SG LG T +
Sbjct: 223 QSNKPLSIGALKNLG-----VVYISCGDEHTAVLTQDG-KVFTFGDNCSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 89/210 (42%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R + +
Sbjct: 182 PLAQVAAGGTHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPAQSNKPLSIGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDEHTAVLTQ--------DGKVFTFGDNCSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 123/281 (43%), Gaps = 56/281 (19%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P +
Sbjct: 185 --QVAAGGTHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPAQSNKPLSIG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G LG P + + I ++
Sbjct: 232 AL-KNLGVVYISCGDEHTAVLTQDGKVFTFGDNCSGQLGYSPTPEKRGPQLVERIDGLV- 289
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
Q+ CG+ HT+ ++ S+G G S
Sbjct: 290 -------------SQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>gi|408681156|ref|YP_006880983.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
gi|328885485|emb|CCA58724.1| LPXTG-motif cell wall anchor domain [Streptomyces venezuelae ATCC
10712]
Length = 408
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 144/342 (42%), Gaps = 78/342 (22%)
Query: 33 GQLGFSG-SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG G +N VP + + I V AGG +LA+D +G
Sbjct: 112 GQLGNGGNTNQTVPTTVPRL--------------------TDIKDVAAGGKHALALDTSG 151
Query: 92 ALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
++ WG+ L ++ T ++ P V +++ G + +AL+ G+
Sbjct: 152 QVYSWGDNSYGQLGNNRTGDSRTVPDRVQGMP-------KVKQISAGCDFSLALLENGK- 203
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y+WG +GQLG G+R + P+ ++ + E+ G +H LT
Sbjct: 204 -------VYAWGRGIHGQLGTGNRATSSVPRQVQGLEN-----IVEIDAGCYHALALT-- 249
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS-VDCGLFHTSVVS 267
+D ++S W + L GQLG+ +T+S+ +P V ++ VS ++ G FH V +
Sbjct: 250 --ADDTVKS--WGYNL--YGQLGNSSTKSSTLPVDV----DWIEGVSDIEAGAFHNYVKT 299
Query: 268 SAGDVWSWG-------MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S VW WG +E N S T A P+ I P+ + +A
Sbjct: 300 SDSHVWGWGNNQYGQLLESDEAFDANVSRTNRTA-----PVEI-------PRLEGVQHLA 347
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
GA H V VT D +++WG G LG G T+ + +L
Sbjct: 348 AGARHGVAVTAD--DVFTWGHNGEGQLGNGTTVARYESVKIL 387
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
SWGA GQLG G L P + + F D V +++ G +A R + ++
Sbjct: 49 SWGAGRTGQLGNGTLSDSLSPSSVTSLFRGD----VDQMSAGGTSSADSFALARTDKTVK 104
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
S +G +GQLG+G + VP V P+ + V G H + ++G V+SWG
Sbjct: 105 S----WGHNSSGQLGNGGNTNQTVPTTV---PRLTDIKDVAAGGKHALALDTSGQVYSWG 157
Query: 277 MEKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
L N GD+ + P + G PK + Q++ G ++ + ++G K
Sbjct: 158 DNS------YGQLGNNRTGDSRTVPDRVQGM----PKVK---QISAGCDFSLALLENG-K 203
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++WGRG G LGTG P V
Sbjct: 204 VYAWGRGIHGQLGTGNRATSSVPRQV 229
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 75/319 (23%), Positives = 125/319 (39%), Gaps = 46/319 (14%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G +L S +PS V V +++ G + T D SWG N++GQL
Sbjct: 59 GNGTLSDSLSPSSVTSLFRGDVDQMSAGGTSSADSFALART----DKTVKSWGHNSSGQL 114
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G ++ P + + +V G H L +++G
Sbjct: 115 GNGGNTNQTVPTTVPRLTD-----IKDVAAGGKHALALD--------TSGQVYSWGDNSY 161
Query: 228 GQLGHGTT-QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLC 284
GQLG+ T S VP++V+ +P+ V +S C F +++ + G V++WG + LG
Sbjct: 162 GQLGNNRTGDSRTVPDRVQGMPK-VKQISAGCD-FSLALLEN-GKVYAWGRGIHGQLG-- 216
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT-DDGYKLWSWGRGR 343
T N A ++ P + G ++ V++ G H + +T DD K SWG
Sbjct: 217 -----TGNRATSSV-PRQVQG-------LENIVEIDAGCYHALALTADDTVK--SWGYNL 261
Query: 344 SGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAM 403
G LG T P V W + + G + +KT D + + +
Sbjct: 262 YGQLGNSSTKSSTLPVDVDWIEGVSDIE-----AGAFHNYVKTSDSHVWGWGNNQYGQLL 316
Query: 404 EEMKLLQSKLSVMERYASI 422
E + + +S R A +
Sbjct: 317 ESDEAFDANVSRTNRTAPV 335
Score = 40.4 bits (93), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 96/248 (38%), Gaps = 48/248 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ + AG SLA+ G ++ WG T + +S P V +V++
Sbjct: 184 KVKQISAGCDFSLALLENGKVYAWGRGIHGQLGTG---NRATSSVPRQVQGL--ENIVEI 238
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G H +AL + D SWG N GQLG +S P ++ V
Sbjct: 239 DAGCYHALALTA--------DDTVKSWGYNLYGQLGNSSTKSSTLPVDVDWIE-----GV 285
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG----------TTQSALVPE 242
++ G+FH + T +S W +G + GQL T ++A V
Sbjct: 286 SDIEAGAFHNYVKTS--------DSHVWGWGNNQYGQLLESDEAFDANVSRTNRTAPV-- 335
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA------GD 296
E+P+ + + G H V +A DV++WG L ++ R E+ G
Sbjct: 336 ---EIPRLEGVQHLAAGARH-GVAVTADDVFTWGHNGEGQLGNGTTVARYESVKILNEGS 391
Query: 297 AISPILIS 304
AI + +S
Sbjct: 392 AIKNVAVS 399
>gi|237835893|ref|XP_002367244.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964908|gb|EEB00104.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506080|gb|EEE31715.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 725
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 128/310 (41%), Gaps = 62/310 (20%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG----LGDRESRLR-- 177
G V ++ACG +HV A V T +GE Y WG GQ+G G R R
Sbjct: 411 LRGKRVTQIACG-KHVSAAV----TEEGE---LYVWGEGRGGQVGPPVPAGRRSEDRRKE 462
Query: 178 -----------------PKIIETF--------NQD-SPWAVYEVTCGSFHTALLTHRKRP 211
P+ +E + +QD +P V +V CGS H A LT
Sbjct: 463 VSTSTFPSSGLSFNVPTPRRLEVYGLAESEETSQDRTPKKVVQVACGSSHCAALTE---- 518
Query: 212 NDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ +T+G + GQLG G ++ L+P +V L +VSV CG F T +S G
Sbjct: 519 ----DGEIYTWGSDDYGQLGLGKESRFVLLPRRVDALADK-RVVSVRCGHFFTCCTTSTG 573
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG-PHGPKFQDP--VQVACGAAHTV 327
+V+ WG + G C N DA P+LIS P G K + G H
Sbjct: 574 EVFVWGYGRD-GECGNGR------SDAALPVLISLEAQPGGKKHASGTVLDTVAGGGHLA 626
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTK 387
T +G LW WGRGR G LG G I+ A A P L EE ++
Sbjct: 627 ARTQEG-GLWMWGRGREGQLGRGDAIESVA-ASRDSPQLVEELWNRSPRGSQSRPSSDSR 684
Query: 388 DLEGAEERDE 397
L G +R+E
Sbjct: 685 ALTGLNDREE 694
Score = 52.0 bits (123), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 135/388 (34%), Gaps = 89/388 (22%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
S C +DGQLG GS L++ P + + H I AG S+
Sbjct: 187 SWGCGIDGQLGLGGS----------ALSVSTPQPVP--ASALHDGEF-ILQCAAGAFHSV 233
Query: 86 AIDNAGALWMWGNC-----------PLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVVK 131
+ G ++ WG P S++ GG SS + S + + T+ K
Sbjct: 234 CCTSLGRVFTWGRGGKNRLGHDWPRETPASASPGGRPYRSSTKHLSASGIAETAVQTLPK 293
Query: 132 --------------VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR----E 173
VACG +H + L +GE YSWG N +G+ G + E
Sbjct: 294 CVEGLCRLSARVDAVACGEDHTLVLTDSGEV--------YSWGGNAHGECGRVETSESAE 345
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ T + W V G L + + + W G
Sbjct: 346 AVQAGDPARTKRRSWLWGVLRGDKGEGDIDALATEEASSAHDANSPWA---------GRT 396
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ LV +V+ + + + CG ++ V+ G+++ WG +G + P R
Sbjct: 397 EKEKGLVGGRVEGALRGKRVTQIACGKHVSAAVTEEGELYVWGEGRGGQVGPPVPAGRRS 456
Query: 294 AGDAISPILISGNGPHGPKFQDP-------------------------VQVACGAAHTVL 328
D + S G F P VQVACG++H
Sbjct: 457 E-DRRKEVSTSTFPSSGLSFNVPTPRRLEVYGLAESEETSQDRTPKKVVQVACGSSHCAA 515
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+T+DG ++++WG G LG GK F
Sbjct: 516 LTEDG-EIYTWGSDDYGQLGLGKESRFV 542
Score = 42.7 bits (99), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 100/273 (36%), Gaps = 88/273 (32%)
Query: 155 VCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
+ YSWG +GQLGLG S P+ + + + G+FH+ T R
Sbjct: 184 ILYSWGCGIDGQLGLGGSALSVSTPQPVPASALHDGEFILQCAAGAFHSVCCTSLGR--- 240
Query: 214 MLESMCWTFGLGENGQLGHG----------------------TTQSALVPEQVKELPQYV 251
+T+G G +LGH + S + V+ LP+ V
Sbjct: 241 -----VFTWGRGGKNRLGHDWPRETPASASPGGRPYRSSTKHLSASGIAETAVQTLPKCV 295
Query: 252 --------YLVSVDCGLFHTSVVSSAGDVWSWG--------------------------- 276
+ +V CG HT V++ +G+V+SWG
Sbjct: 296 EGLCRLSARVDAVACGEDHTLVLTDSGEVYSWGGNAHGECGRVETSESAEAVQAGDPART 355
Query: 277 -----------MEKGLG-LCPNASLTRNEAGDAISPI---------LISGNGPHGPKFQD 315
+KG G + A+ + A DA SP L+ G + +
Sbjct: 356 KRRSWLWGVLRGDKGEGDIDALATEEASSAHDANSPWAGRTEKEKGLVGGRVEGALRGKR 415
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
Q+ACG + VT++G +L+ WG GR G +G
Sbjct: 416 VTQIACGKHVSAAVTEEG-ELYVWGEGRGGQVG 447
>gi|330797026|ref|XP_003286564.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
gi|325083469|gb|EGC36921.1| hypothetical protein DICPUDRAFT_77429 [Dictyostelium purpureum]
Length = 1440
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/215 (26%), Positives = 100/215 (46%), Gaps = 29/215 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD---------- 123
+ +KAG +S AI + G L++WG + F P+ + +
Sbjct: 128 VIKIKAGNNISAAITDKGDLYIWGTSSFGQLGNGKMNPKSNQFIPTTILEPFISEQEKDN 187
Query: 124 --FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
+ V G++H +A+ + G +SWG+N GQLGLG ++L P +
Sbjct: 188 PIYQNIQYSNVCFGAQHTIAVSTTG--------TIFSWGSNQYGQLGLGHCNTKLVPVPV 239
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
FN+ S V ++ G+FH++LLT LE + +G + GQLG G T VP
Sbjct: 240 R-FNRHSTRIVVDIASGNFHSSLLT--------LEGDVYLWGSNQYGQLGQGDTIDLNVP 290
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
++VK ++ + + G HT +++ DV+++G
Sbjct: 291 KKVKGSIEFKKINRMALGNNHTILLTKDQDVYTFG 325
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 107/251 (42%), Gaps = 51/251 (20%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV V+CG H + L S YK +S G N GQLG+ + P ++T +
Sbjct: 76 VVSVSCGFNHTLLLTSE---YK-----IFSMGFNQVGQLGIENVVDSAVPLPVDTLQK-- 125
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG------------TTQ 236
V ++ G+ +A +T + + +G GQLG+G T
Sbjct: 126 -CNVIKIKAGNNISAAITDKGD--------LYIWGTSSFGQLGNGKMNPKSNQFIPTTIL 176
Query: 237 SALVPEQVKELPQY--VYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLT 290
+ EQ K+ P Y + +V G HT VS+ G ++SWG + GLG C N L
Sbjct: 177 EPFISEQEKDNPIYQNIQYSNVCFGAQHTIAVSTTGTIFSWGSNQYGQLGLGHC-NTKLV 235
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P+ + N H + V +A G H+ L+T +G ++ WG + G LG G
Sbjct: 236 ---------PVPVRFNR-HSTRIV--VDIASGNFHSSLLTLEG-DVYLWGSNQYGQLGQG 282
Query: 351 KTIDFFAPAIV 361
TID P V
Sbjct: 283 DTIDLNVPKKV 293
>gi|157821577|ref|NP_001101850.1| RCC1 and BTB domain-containing protein 1 [Rattus norvegicus]
gi|149064107|gb|EDM14377.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Rattus norvegicus]
Length = 531
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLVKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V++ CG + V +G+
Sbjct: 145 ---ADGELFAWGYNNCGQVGSGSTANQPTPRKVTNCLHTKKVVNIACGQTSSMAVLDSGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ HG Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHGVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +P ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGSKNNLLSPTQIM 280
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API++C+ V G S+A+ G L+ WG NC G S + TP
Sbjct: 117 APIQVCTNLLVKQVVEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHTKKVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G+ +
Sbjct: 224 PVRVAALH---GVCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGSKNN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMWGQCRG 315
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 117/281 (41%), Gaps = 41/281 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T V
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLV-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGELF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 TKKVVNIACGQ------TSSMAVLDSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HGVCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGSKNNLLSPTQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
K + AC + HT G ++ WG RG+S +L
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKRIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG +L++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLVKQVVEVACGSHHSMALAADG-ELFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|335296869|ref|XP_003357882.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sus scrofa]
Length = 531
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +VS+ CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 138/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVSIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN------TYGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++ AC +AHT G ++ WG RG+S L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVTWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|297812127|ref|XP_002873947.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
gi|297319784|gb|EFH50206.1| hypothetical protein ARALYDRAFT_488831 [Arabidopsis lyrata subsp.
lyrata]
Length = 1100
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 112/250 (44%), Gaps = 53/250 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H V + GE++ SWG + G+LG G + PK+I+ S
Sbjct: 309 VQYIACGGQHAVLVTKQGESF--------SWGEESEGRLGHGVDSNVQHPKLIDAL---S 357
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG +H+ +T L +T+G G+ G LGHG S VP++V L
Sbjct: 358 TTNIELVACGEYHSCAVT--------LSGDLYTWGKGDFGILGHGNEVSHWVPKRVNFLM 409
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +++ S+ CG +HT+VV+SAG ++++G + G+ + GD S +
Sbjct: 410 EGIHVSSIACGPYHTAVVTSAGQLFTFG-DGTFGVLGH--------GDRKSVFI------ 454
Query: 309 HGPKFQDP------VQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGK 351
P+ D V+ ACG HT V + KL++WG G LG G
Sbjct: 455 --PREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGD 512
Query: 352 TIDFFAPAIV 361
P V
Sbjct: 513 KEPKLVPTCV 522
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 83/312 (26%), Positives = 131/312 (41%), Gaps = 42/312 (13%)
Query: 63 DSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
DS H I S V G S A+ +G L+ WG D G + VS +
Sbjct: 344 DSNVQHPKLIDALSTTNIELVACGEYHSCAVTLSGDLYTWGKG---DFGILGHGNEVSHW 400
Query: 117 TPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V + G V +ACG H + SAG+ +++G G LG GDR+S
Sbjct: 401 VPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRKSV 452
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ +++ CG +HTA ++ ++ +T+G G+ +LG
Sbjct: 453 FIPREVDSLKG---LRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKSRLG 509
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG + LVP V L + + V CG T ++++G V++ G P
Sbjct: 510 HGDKEPKLVPTCVAALVEPNF-CQVACGHSLTVALTTSGHVYTMG-------SPVYGQLG 561
Query: 292 NEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
N D P + G K ++ACGA H ++T ++++WG+G +G LG
Sbjct: 562 NPHADGKVPTRVEG------KLHKSFVEEIACGAYHVAVLTSR-TEVYTWGKGSNGRLGH 614
Query: 350 GKTIDFFAPAIV 361
G D +P +V
Sbjct: 615 GDADDRNSPTLV 626
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 120/297 (40%), Gaps = 51/297 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G + + +AG L+ +G +G F ++ S F P V
Sbjct: 412 IHVSSIACGPYHTAVVTSAGQLFTFG---------DGTFGVLGHGDRKSVFIPREVDSLK 462
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + +LG GD+E +L P
Sbjct: 463 GLRTVRAACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKSRLGHGDKEPKLVP 519
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT +T G GQLG+
Sbjct: 520 TCVAALVEPN---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGNPHADGK 568
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
VP +V+ ++ + CG +H +V++S +V++WG KG N L +A D
Sbjct: 569 -VPTRVEGKLHKSFVEEIACGAYHVAVLTSRTEVYTWG--KG----SNGRLGHGDADDRN 621
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
SP L+ K + +ACG+ T V W+ G +S G + +F
Sbjct: 622 SPTLV-----ESLKDKQVKSIACGSNFTAAVC---LHKWASGMDQSMCSGCRQPFNF 670
>gi|431902378|gb|ELK08879.1| RCC1 and BTB domain-containing protein 2 [Pteropus alecto]
Length = 621
Score = 85.5 bits (210), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/235 (30%), Positives = 108/235 (45%), Gaps = 34/235 (14%)
Query: 131 KVACGS----EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
K+AC S HV+ + GE + +WG N QLG G L P I T
Sbjct: 169 KIACFSYGSGPHVILATTEGEIF--------TWGHNAYSQLGNGTTNHGLVPCHIST--N 218
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
S V EV CGS+H+ +LT + + +G +GQ+G G+T + +P +V
Sbjct: 219 LSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGSGSTANQPIPRRVTG 270
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q +V++ CG + V G+V+ WG N L +G+ +P I+
Sbjct: 271 CLQNKVVVNIACGQMCSVAVVDNGEVYVWGYNG------NGQLGLGSSGNQSTPCRIAA- 323
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G Q +VACG AHT+++TD+G +++ WG G LGTG + P V
Sbjct: 324 -LQGICVQ---RVACGYAHTLVLTDEG-QVYVWGANSYGQLGTGNKSNQSYPTPV 373
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 73/254 (28%), Positives = 105/254 (41%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 224 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 275
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P ++ L
Sbjct: 276 --VVVNIACGQMCSVAVV------DNGEVYVW--GYNGNGQLGLGSSGNQSTPCRIAAL- 324
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G V+ WG G G N S A + I I+
Sbjct: 325 QGICVQRVACGYAHTLVLTDEGQVYVWGANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIA 384
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVLG-------TGKTIDF 355
AC + HT G ++ WG RG+S +L T
Sbjct: 385 ---------------ACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTSFSCTDDVFAC 429
Query: 356 FAPAIVLWPPLTEE 369
FA V W LT E
Sbjct: 430 FATPAVSWRLLTVE 443
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 95/250 (38%), Gaps = 43/250 (17%)
Query: 34 QLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
QLG +N LVPC I L+ ++ V G SL + + G
Sbjct: 200 QLGNGTTNHGLVPCHISTNLS-----------------NKQVIEVACGSYHSLVLTSDGE 242
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG +S G S + P V VV +ACG VA+V GE Y
Sbjct: 243 VFAWG---YNNSGQVGSGSTANQPIPRRVTGCLQNKVVVNIACGQMCSVAVVDNGEVY-- 297
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
WG N NGQLGLG ++ P I V V CG HT +LT
Sbjct: 298 ------VWGYNGNGQLGLGSSGNQSTPCRIAALQG---ICVQRVACGYAHTLVLTD---- 344
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAG 270
E + +G GQLG G + P V + ++ C HTS + G
Sbjct: 345 ----EGQVYVWGANSYGQLGTGNKSNQSYPTPVAVEKDRIIEIAA-CHSTHTSAAKTQGG 399
Query: 271 DVWSWGMEKG 280
V+ WG +G
Sbjct: 400 HVYMWGQCRG 409
>gi|302847903|ref|XP_002955485.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
gi|300259327|gb|EFJ43556.1| hypothetical protein VOLCADRAFT_119094 [Volvox carteri f.
nagariensis]
Length = 1660
Score = 85.5 bits (210), Expect = 5e-14, Method: Composition-based stats.
Identities = 67/200 (33%), Positives = 101/200 (50%), Gaps = 26/200 (13%)
Query: 155 VCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
V ++G +G+LGLG +S+ P+I+ + + +++ +V CG HTA++T
Sbjct: 8 VLATFGTAADGRLGLGFPLKSQFYPRIVASL---AGYSIKQVACGGAHTAVVTD------ 58
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
+ +TFGL GQLGH + LP V V+V G +HT ++SAG+VW
Sbjct: 59 --DGALFTFGLNSWGQLGHSRQDKFVASPLEVGLPDPV--VAVAAGGYHTLALTSAGEVW 114
Query: 274 SWGM--EKGLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
WGM E LG+ P+ T G + P L+ G V +A G H++ +T
Sbjct: 115 CWGMAGEGQLGIGEPSEGAT---GGRQVEPRLVGSLSGAG-----VVSLAAGDHHSLALT 166
Query: 331 DDGYKLWSWGRGRSGVLGTG 350
G +L+SWGRG G LG G
Sbjct: 167 RSG-ELFSWGRGDQGALGHG 185
Score = 62.0 bits (149), Expect = 7e-07, Method: Composition-based stats.
Identities = 59/220 (26%), Positives = 91/220 (41%), Gaps = 48/220 (21%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
A I V GG + + + GAL+ +G +S + G S F SP+ V
Sbjct: 39 AGYSIKQVACGGAHTAVVTDDGALFTFG----LNSWGQLGHSRQDKFVASPLEVGLPDPV 94
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES------RLRPKIIET 183
V VA G H +AL SAGE + WG GQLG+G+ ++ P+++ +
Sbjct: 95 VAVAAGGYHTLALTSAGEVW--------CWGMAGEGQLGIGEPSEGATGGRQVEPRLVGS 146
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
S V + G H+ LT R ++ +++G G+ G LGHGT
Sbjct: 147 L---SGAGVVSLAAGDHHSLALT---RSGEL-----FSWGRGDQGALGHGT--------- 186
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
V++ G + + V S G+ + WG G L
Sbjct: 187 ----------VAITAGPYSSGAVDSRGNAYVWGYGTGYQL 216
Score = 59.3 bits (142), Expect = 4e-06, Method: Composition-based stats.
Identities = 66/257 (25%), Positives = 97/257 (37%), Gaps = 59/257 (22%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
GF L S F P V G+++ +VACG H + +D +++G N+ GQLG
Sbjct: 23 GFPLKSQFYPRIVASLAGYSIKQVACGGAHTAVVT--------DDGALFTFGLNSWGQLG 74
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
SR + P V V G +HT LT E CW G+ G
Sbjct: 75 ----HSRQDKFVASPLEVGLPDPVVAVAAGGYHTLALTSAG------EVWCW--GMAGEG 122
Query: 229 QLGHGT-TQSALVPEQVKELPQYV------YLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
QLG G ++ A QV+ P+ V +VS+ G H+ ++ +G+++SW
Sbjct: 123 QLGIGEPSEGATGGRQVE--PRLVGSLSGAGVVSLAAGDHHSLALTRSGELFSW------ 174
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G G G V + G + V G + WG
Sbjct: 175 -----------------------GRGDQGALGHGTVAITAGPYSSGAVDSRG-NAYVWGY 210
Query: 342 GRSGVLGTGKTIDFFAP 358
G LGTG+ + P
Sbjct: 211 GTGYQLGTGRATNEMQP 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Composition-based stats.
Identities = 43/145 (29%), Positives = 57/145 (39%), Gaps = 37/145 (25%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG S + V +E +G PD + +V AGG +LA+ +AG
Sbjct: 71 GQLGHSRQDKFVASPLE----VGLPDP--------------VVAVAAGGYHTLALTSAGE 112
Query: 93 LWMWG-------NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSA 145
+W WG P GG P V G VV +A G H +AL +
Sbjct: 113 VWCWGMAGEGQLGIGEPSEGATGG----RQVEPRLVGSLSGAGVVSLAAGDHHSLALTRS 168
Query: 146 GETYKGEDLVCYSWGANNNGQLGLG 170
GE +SWG + G LG G
Sbjct: 169 GEL--------FSWGRGDQGALGHG 185
Score = 47.0 bits (110), Expect = 0.021, Method: Composition-based stats.
Identities = 43/133 (32%), Positives = 63/133 (47%), Gaps = 17/133 (12%)
Query: 221 TFGLGENGQLGHG-TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
TFG +G+LG G +S P V L Y + V CG HT+VV+ G ++++G+
Sbjct: 11 TFGTAADGRLGLGFPLKSQFYPRIVASLAGYS-IKQVACGGAHTAVVTDDGALFTFGLNS 69
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWS 338
L +R + A SP+ + DPV VA G HT+ +T G ++W
Sbjct: 70 WGQL----GHSRQDKFVA-SPLEVG--------LPDPVVAVAAGGYHTLALTSAG-EVWC 115
Query: 339 WGRGRSGVLGTGK 351
WG G LG G+
Sbjct: 116 WGMAGEGQLGIGE 128
>gi|357502467|ref|XP_003621522.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355496537|gb|AES77740.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 476
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 90/299 (30%), Positives = 136/299 (45%), Gaps = 69/299 (23%)
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVK-VACGSEHVVALVSAG 146
+ G LW+WG +G S P W F +T +K V+CG+ HVVAL
Sbjct: 140 STGRLWVWGQ-------NQG------SNLPRLFWGAFEPNTTIKQVSCGAVHVVAL---- 182
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQ---DSPWAV--YEVTCGSF 200
ED + +WG N GQLG G L+ +II ++ + ++P V V+CG +
Sbjct: 183 ----SEDGLLQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELVKITRVSCGEY 238
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ---SALVPEQVKELPQYVYLVSVD 257
HTA ++ + +T+GLG GQLGH + Q L+P +V L +++
Sbjct: 239 HTAAISDKGE--------VYTWGLGNMGQLGHTSLQYGDKELIPRRVVSLDS-IFIKDAA 289
Query: 258 CGLFHTSVVSSAGDVWSWGM----------EKGLGLC-PNASLT--RNEAGDAISPILIS 304
CG HT ++ G +++WG + GL C PN S T RN P+L+
Sbjct: 290 CGGVHTCALTQEGALYAWGGGQSGQLGLGPDTGLFSCIPNDSRTFFRN------IPVLVV 343
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
P G + VACG +HT++ DG ++ WG G K+ + P+ V W
Sbjct: 344 ---PKGVQL-----VACGHSHTLICMRDG-RIHGWGYNSYGQAANEKSTYAWYPSPVDW 393
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 83/268 (30%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF----- 184
+ +ACG EH A+ S G + ++WGAN GQLG G E R PK ++
Sbjct: 65 LDIACGREHTAAIASDG--------LLFTWGANEFGQLGDGTEERRKHPKKVKQLESEFV 116
Query: 185 ---------------------------------NQDSP-----WAVYE-------VTCGS 199
NQ S W +E V+CG+
Sbjct: 117 KSVACGAHCSACIAEPRENDGTVSTGRLWVWGQNQGSNLPRLFWGAFEPNTTIKQVSCGA 176
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV--------KELPQYV 251
H L+ + + +G E GQLG G T L ++ E P+ V
Sbjct: 177 VHVVALSE--------DGLLQAWGYNEQGQLGRGVTCEGLQGARIISSYAKFLDEAPELV 228
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG +HT+ +S G+V++WG+ +G + SL + + I ++S +
Sbjct: 229 KITRVSCGEYHTAAISDKGEVYTWGLGN-MGQLGHTSLQYGDK-ELIPRRVVSLDSIF-- 284
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSW 339
+D ACG HT +T +G L++W
Sbjct: 285 -IKD---AACGGVHTCALTQEG-ALYAW 307
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 98/220 (44%), Gaps = 43/220 (19%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAV----YEVTCGSFHTALLTHRKRP 211
Y WG N +GQ G +++ +LR PK + P + ++ CG HTA +
Sbjct: 24 YVWGYNQSGQTGRKEKDDQLRIPKQLPPQLFGCPAGLNTRWLDIACGREHTAAIAS---- 79
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS---- 267
+ + +T+G E GQLG GT + P++VK+L + ++ SV CG ++ ++
Sbjct: 80 ----DGLLFTWGANEFGQLGDGTEERRKHPKKVKQL-ESEFVKSVACGAHCSACIAEPRE 134
Query: 268 -----SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
S G +W WG +G L P L G + QV+CG
Sbjct: 135 NDGTVSTGRLWVWGQNQGSNL----------------PRLFWGAFEPNTTIK---QVSCG 175
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
A H V +++DG L +WG G LG G T + A ++
Sbjct: 176 AVHVVALSEDGL-LQAWGYNEQGQLGRGVTCEGLQGARII 214
>gi|48475110|gb|AAT44179.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
gi|52353417|gb|AAU43985.1| putative regulator of chromosome condensation protein [Oryza sativa
Japonica Group]
Length = 1064
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/298 (26%), Positives = 131/298 (43%), Gaps = 48/298 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF----SLVSSFTPSPVWD-FHGHTVVK 131
+ G + + +G L+ WG D S G + VS + P V G V+
Sbjct: 332 IACGEFHTCVVTASGDLYDWG-----DGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLS 386
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H +S+G+ +++G G LG GDRES PK +E S +
Sbjct: 387 VACGSWHSALTMSSGK--------LFTFGDGTFGSLGHGDRESVAYPKEVEAL---SGFR 435
Query: 192 VYEVTCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+V CG +H+A + + + + +T+G G+ +LGHG ++ LVP V+ L
Sbjct: 436 AMKVACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVD 495
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + V CG T ++++G V++ G N N D P ++
Sbjct: 496 HNFH-QVACGHSMTVALATSGHVFTMG-------SSNNGQLGNPKADGKQPCMV------ 541
Query: 310 GPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CG+ H +T ++++WG G +G LG G D P +V
Sbjct: 542 ----QDKLGNELVEEISCGSNHVAALTSRS-EVYTWGMGANGRLGHGSVEDKKKPTLV 594
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG +EG + + S T P P+ V ++ACGS H+
Sbjct: 231 IESLGDVYVWGEVWTEVLPSEGSSNYLCSKTDFLIPKPLESDVVLDVQQIACGSRHIGLT 290
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E+ + V + CG FHT
Sbjct: 291 TRQGEVF--------TWGEELGGRLGHGTDTDICRPKLVESLAVSN---VEYIACGEFHT 339
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
++T D+ + W G G LGHGT S +P++V + + ++SV CG +H
Sbjct: 340 CVVT---ASGDLYD---WGDGSYNAGLLGHGTGVSHWLPKRVSGPLEGLQVLSVACGSWH 393
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ S+G ++++ G LG S+ + +A+S ++VA
Sbjct: 394 SALTMSSGKLFTFGDGTFGSLGHGDRESVAYPKEVEALSGF-------------RAMKVA 440
Query: 321 CGAAHTVLVTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ + + KL++WG G LG G P V
Sbjct: 441 CGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCV 490
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 84/174 (48%), Gaps = 23/174 (13%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D + G + P+ V H +VACG VAL ++G +
Sbjct: 465 LFTWGD---GDKNRLGHGDKEAKLVPTCVQALVDHNFHQVACGHSMTVALATSGHVF--- 518
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+ G++NNGQLG + + +P +++ ++ V E++CGS H A LT R
Sbjct: 519 -----TMGSSNNGQLGNPKADGK-QPCMVQ--DKLGNELVEEISCGSNHVAALTSR---- 566
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G+G NG+LGHG+ + P V L ++ S+ CG T+ +
Sbjct: 567 ----SEVYTWGMGANGRLGHGSVEDKKKPTLVDALKDR-HVKSISCGSNFTTCI 615
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/260 (23%), Positives = 103/260 (39%), Gaps = 28/260 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ SV G S ++G L+ +G+ + G S P V G +K
Sbjct: 382 LQVLSVACGSWHSALTMSSGKLFTFGDGTF---GSLGHGDRESVAYPKEVEALSGFRAMK 438
Query: 132 VACGSEHVVALV--SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H A+V S + ++WG + +LG GD+E++L P ++ +
Sbjct: 439 VACGVWHSAAIVEISGQASTNAMSRKLFTWGDGDKNRLGHGDKEAKLVPTCVQALVDHN- 497
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
++V CG T L +T G NGQLG+ P V++
Sbjct: 498 --FHQVACGHSMTVALA--------TSGHVFTMGSSNNGQLGNPKADGKQ-PCMVQDKLG 546
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + CG H + ++S +V++WGM N L D P L+
Sbjct: 547 NELVEEISCGSNHVAALTSRSEVYTWGMG------ANGRLGHGSVEDKKKPTLVD----- 595
Query: 310 GPKFQDPVQVACGAAHTVLV 329
K + ++CG+ T +
Sbjct: 596 ALKDRHVKSISCGSNFTTCI 615
>gi|356526924|ref|XP_003532065.1| PREDICTED: uncharacterized protein LOC100797527 [Glycine max]
Length = 1099
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 87/311 (27%), Positives = 140/311 (45%), Gaps = 38/311 (12%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P +E S TN I V G + A+ +G L+ WG+ + G + VS +
Sbjct: 348 PKLIESLSNTN------IELVACGEYHTCAVTLSGDLYTWGDGTY-NYGLLGHGNQVSHW 400
Query: 117 TPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G V ++CG H + S+G+ +++G G LG GDR+S
Sbjct: 401 VPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQ--------LFTFGDGTFGVLGHGDRKSV 452
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ IE+ + CG +HTA ++ ++ +T+G G+ G+LG
Sbjct: 453 SLPREIESLKG---LRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 509
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG +S LVP +V L + + V CG T +S G V++ +G C L
Sbjct: 510 HGDKESKLVPTRVVTLDEPNF-CQVACGHSMTVALSRLGHVYT------MGSCVYGHLGN 562
Query: 292 NEA-GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+A G +P+ G F + ++ACGA H ++T ++++WG+G +G LG G
Sbjct: 563 TQADGKLPTPV----EGKLSKSFVE--EIACGAYHVAVLTSR-TEVFTWGKGANGCLGHG 615
Query: 351 KTIDFFAPAIV 361
T D P +V
Sbjct: 616 DTNDRNTPTLV 626
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 109/251 (43%), Gaps = 51/251 (20%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG EH + GE + SWG + G+LG G PK+IE+ + +
Sbjct: 307 VQNIACGGEHAAMVTKQGEVF--------SWGGESGGRLGHGVDSDVPHPKLIESLSNTN 358
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENGQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G G LGHG S VP++V
Sbjct: 359 ---IELVACGEYHTCAVT--------LSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG 407
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPIL 302
+ +++ S+ CG +HT+VV+S+G ++++G G G + SL R I +
Sbjct: 408 PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGVLGHGDRKSVSLPRE-----IESL- 461
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGK 351
K VQ ACG HT V + KL++WG G G LG G
Sbjct: 462 ---------KGLRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGD 512
Query: 352 TIDFFAPAIVL 362
P V+
Sbjct: 513 KESKLVPTRVV 523
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/262 (23%), Positives = 107/262 (40%), Gaps = 30/262 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + S+ G + + ++G L+ +G+ G S P + G V+
Sbjct: 412 IHVSSISCGPWHTAVVTSSGQLFTFGDGTF---GVLGHGDRKSVSLPREIESLKGLRTVQ 468
Query: 132 VACGSEHVVA----LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
ACG H A +V + ++WG + G+LG GD+ES+L P + T ++
Sbjct: 469 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTRVVTLDEP 528
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +V CG T L+ +T G G LG+ T +P V+
Sbjct: 529 N---FCQVACGHSMTVALSRL--------GHVYTMGSCVYGHLGN-TQADGKLPTPVEGK 576
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + CG +H +V++S +V++WG KG C L + D +P L+
Sbjct: 577 LSKSFVEEIACGAYHVAVLTSRTEVFTWG--KGANGC----LGHGDTNDRNTPTLV---- 626
Query: 308 PHGPKFQDPVQVACGAAHTVLV 329
K + +ACG T +
Sbjct: 627 -EALKDKQVKSIACGTNFTAAI 647
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G +L+P+ + E + + ++ CG H ++V+ G+V+SWG E G L
Sbjct: 288 GVKMDSLLPKAL-ESAVVLDVQNIACGGEHAAMVTKQGEVFSWGGESG------GRLGHG 340
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTG 350
D P LI + VACG HT VT G L++WG G G+LG G
Sbjct: 341 VDSDVPHPKLIESLSNTNIEL-----VACGEYHTCAVTLSG-DLYTWGDGTYNYGLLGHG 394
Query: 351 KTIDFFAPAIVLWP 364
+ + P V P
Sbjct: 395 NQVSHWVPKRVNGP 408
>gi|221484866|gb|EEE23156.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 725
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 96/310 (30%), Positives = 128/310 (41%), Gaps = 62/310 (20%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG----LGDRESRLR-- 177
G V ++ACG +HV A V T +GE Y WG GQ+G G R R
Sbjct: 411 LRGKRVTQIACG-KHVSAAV----TEEGE---LYVWGEGRGGQVGPPVPAGRRSEDRRKE 462
Query: 178 -----------------PKIIETF--------NQD-SPWAVYEVTCGSFHTALLTHRKRP 211
P+ +E + +QD +P V +V CGS H A LT
Sbjct: 463 VSTSTFPSSGLSFNVPTPRRLEVYGLAESEETSQDRTPKKVVQVACGSSHCAALTE---- 518
Query: 212 NDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ +T+G + GQLG G ++ L+P +V L +VSV CG F T +S G
Sbjct: 519 ----DGEIYTWGSDDYGQLGLGKESRFVLLPRRVDALADK-RVVSVRCGHFFTCCTTSTG 573
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG-PHGPKFQDP--VQVACGAAHTV 327
+V+ WG + G C N DA P+LIS P G K + G H
Sbjct: 574 EVFVWGYGRD-GECGNGR------SDAALPVLISLEAQPGGKKHASGTVLDTVAGGGHLA 626
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTK 387
T +G LW WGRGR G LG G I+ A A P L EE ++
Sbjct: 627 ARTQEG-GLWMWGRGREGQLGRGDAIESVA-ASRDSPQLVEELWNRSPRGSQSRPSSDSR 684
Query: 388 DLEGAEERDE 397
L G +R+E
Sbjct: 685 ALTGLNDREE 694
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/388 (22%), Positives = 135/388 (34%), Gaps = 89/388 (22%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
S C +DGQLG GS L++ P + + H I AG S+
Sbjct: 187 SWGCGIDGQLGLGGS----------ALSVSTPQPVP--ASALHDGEF-ILQCAAGAFHSV 233
Query: 86 AIDNAGALWMWGNC-----------PLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVVK 131
+ G ++ WG P S++ GG SS + S + + T+ K
Sbjct: 234 CCTSLGRVFTWGRGGKNRLGHEWPRETPASASPGGRPYRSSTKHLSASGIAETAVQTLPK 293
Query: 132 --------------VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR----E 173
VACG +H + L +GE YSWG N +G+ G + E
Sbjct: 294 CVEGLCRLSARADAVACGEDHTLVLTDSGEV--------YSWGGNAHGECGRVETSESAE 345
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ T + W V G L + + + W G
Sbjct: 346 AVQAGDPARTKRRSWLWGVLRGDKGEGDIDALATEEASSAHDANSPWA---------GRT 396
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ LV +V+ + + + CG ++ V+ G+++ WG +G + P R
Sbjct: 397 EKEKGLVGGRVEGALRGKRVTQIACGKHVSAAVTEEGELYVWGEGRGGQVGPPVPAGRRS 456
Query: 294 AGDAISPILISGNGPHGPKFQDP-------------------------VQVACGAAHTVL 328
D + S G F P VQVACG++H
Sbjct: 457 E-DRRKEVSTSTFPSSGLSFNVPTPRRLEVYGLAESEETSQDRTPKKVVQVACGSSHCAA 515
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+T+DG ++++WG G LG GK F
Sbjct: 516 LTEDG-EIYTWGSDDYGQLGLGKESRFV 542
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 113/310 (36%), Gaps = 57/310 (18%)
Query: 72 IKICSVKAGGMMSLAI--DNAGALWMWGNCPLPDSSTEGGFSL-VSSFTPSPVWDFH-GH 127
+ CS G + A D + L+ WG C + GG +L VS+ P P H G
Sbjct: 162 VASCSEPGSGNKAKASSSDRSRILYSWG-CGIDGQLGLGGSALSVSTPQPVPASALHDGE 220
Query: 128 TVVKVACGSEHVVALVSAGETYK----GEDLVCYSWGANNNGQLGLGDRESRLRPK---- 179
+++ A G+ H V S G + G++ + + W G R R K
Sbjct: 221 FILQCAAGAFHSVCCTSLGRVFTWGRGGKNRLGHEWPRETPASASPGGRPYRSSTKHLSA 280
Query: 180 --IIETFNQDSPWAVY----------EVTCGSFHTALLTHRKRPNDMLESMCWTFGL-GE 226
I ET Q P V V CG HT +LT D E W GE
Sbjct: 281 SGIAETAVQTLPKCVEGLCRLSARADAVACGEDHTLVLT------DSGEVYSWGGNAHGE 334
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSV--------DCGLFHTSVVSSAGDVWSWGME 278
G++ + A+ + +L V D T SSA D S
Sbjct: 335 CGRVETSESAEAVQAGDPARTKRRSWLWGVLRGDKGEGDIDALATEEASSAHDANS---- 390
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
P A T E G L+ G + + Q+ACG + VT++G +L+
Sbjct: 391 ------PWAGRTEKEKG------LVGGRVEGALRGKRVTQIACGKHVSAAVTEEG-ELYV 437
Query: 339 WGRGRSGVLG 348
WG GR G +G
Sbjct: 438 WGEGRGGQVG 447
>gi|354500120|ref|XP_003512150.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Cricetulus griseus]
Length = 631
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 138/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IVHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQTSPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHGSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 115/278 (41%), Gaps = 66/278 (23%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H V L+ GE Y + G N+ GQLG +RE +I +Q
Sbjct: 35 SIKEVACGGNHSVFLLEDGEVY--------TCGVNSKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IVHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG + GLG S R + + I
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQTSPQRVRSLEGIPL 192
Query: 301 ILISGNGPH-------GPKF-----------------------------QDPVQVACGAA 324
++ G H G F Q V ++CG
Sbjct: 193 AQVAAGGAHSFALSLSGAVFGWGMNNAGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEE 252
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
HT ++T G ++++G G G LG G D P VL
Sbjct: 253 HTAVLTKSG-GVFTFGAGSCGQLGHGSMNDEVNPRRVL 289
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG G + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHGSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|421871589|ref|ZP_16303210.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
gi|372459473|emb|CCF12759.1| regulator of chromosome condensation family protein [Brevibacillus
laterosporus GI-9]
Length = 392
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 86/330 (26%), Positives = 134/330 (40%), Gaps = 50/330 (15%)
Query: 65 KTNHKAPIK----ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
KT P+ + V G ++A+ G +W WG + E S + TP
Sbjct: 72 KTTSPVPVDDLSDVLMVDTGTSHTVALQKDGTVWTWGWSAYGELGNEKAKS--TEKTPHH 129
Query: 121 V-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
V W V +V G +AL ED +++G N +GQLG G E+R++P
Sbjct: 130 VKWL---SDVKQVRAGENFTLALK--------EDGTVWAFGKNRSGQLGDGTTETRVKPV 178
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ + + G + L+ + W +G GQLG+GT + AL
Sbjct: 179 QVSGLTD-----IVAIDAGEEFSLALSE--------DGTVWAWGNNSVGQLGNGTREKAL 225
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
P QV EL ++++ G V+S GDV+ WG +G L + S
Sbjct: 226 QPVQVSELTD---VIAISTGEKQGYAVTSNGDVYGWGYNQG-------KLGDGTKKSSNS 275
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P+LI G D + V G HT+ + +DG +W+WG G LG G +++
Sbjct: 276 PVLIDG-------IYDVIAVDSGKQHTLALKEDG-TVWAWGTNTHGQLGYGTPVNYSMTP 327
Query: 360 IVLWPPLTEEFKQD-ELNTGGLDDEIKTKD 388
++ TE Q ++ GG KD
Sbjct: 328 NQVFLESTEPLNQIVAIDAGGFHSHAIKKD 357
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 94/216 (43%), Gaps = 34/216 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I ++ AG SLA+ G +W WGN + G + + P V + V+ ++
Sbjct: 186 IVAIDAGEEFSLALSEDGTVWAWGNNSV---GQLGNGTREKALQPVQVSELT--DVIAIS 240
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G + A+ S G+ Y WG N G+LG G ++S P +I D + V
Sbjct: 241 TGEKQGYAVTSNGD--------VYGWGYNQ-GKLGDGTKKSSNSPVLI-----DGIYDVI 286
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQV--KELPQY 250
V G HT L + W +G +GQLG+GT ++ P QV +
Sbjct: 287 AVDSGKQHTLALKE--------DGTVWAWGTNTHGQLGYGTPVNYSMTPNQVFLESTEPL 338
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG 282
+V++D G FH+ + G VWSWG E GLG
Sbjct: 339 NQIVAIDAGGFHSHAIKKDGTVWSWGFNSNGELGLG 374
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 123/296 (41%), Gaps = 54/296 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ V+AG +LA+ G +W +G + L D +TE + V S + D +V
Sbjct: 136 VKQVRAGENFTLALKEDGTVWAFGKNRSGQLGDGTTE---TRVKPVQVSGLTD-----IV 187
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+ G E +AL ED ++WG N+ GQLG G RE L+P +
Sbjct: 188 AIDAGEEFSLAL--------SEDGTVWAWGNNSVGQLGNGTREKALQPVQVSELTD---- 235
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN-GQLGHGTTQSALVPEQVKELPQ 249
V ++ G +T +G G N G+LG GT +S+ P + +
Sbjct: 236 -VIAISTGEKQGYAVTSNGD----------VYGWGYNQGKLGDGTKKSSNSPVLIDGIYD 284
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 305
+++VD G HT + G VW+WG + G G N S+T N+ + +
Sbjct: 285 ---VIAVDSGKQHTLALKEDGTVWAWGTNTHGQLGYGTPVNYSMTPNQ-------VFLES 334
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P V + G H+ + DG +WSWG +G LG G + PA +
Sbjct: 335 TEP----LNQIVAIDAGGFHSHAIKKDG-TVWSWGFNSNGELGLGHSKKQMYPAKI 385
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 65/139 (46%), Gaps = 27/139 (19%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFS 111
L D +K + +P+ + +V +G +LA+ G +W WG ++T G G+
Sbjct: 265 LGDGTKKSSNSPVLIDGIYDVIAVDSGKQHTLALKEDGTVWAWG------TNTHGQLGYG 318
Query: 112 LVSSFTPSPVWDFHGHT-----VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
+++ +P F T +V + G H A+ +D +SWG N+NG+
Sbjct: 319 TPVNYSMTPNQVFLESTEPLNQIVAIDAGGFHSHAIK--------KDGTVWSWGFNSNGE 370
Query: 167 LGLGDRESRLRPKIIETFN 185
LGLG + ++ P IET N
Sbjct: 371 LGLGHSKKQMYPAKIETIN 389
>gi|148704197|gb|EDL36144.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_b [Mus musculus]
Length = 563
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ P + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 93 STLVPKKLEALCGKKIKSLSYGSGPHVLLTT-------EDGVVYAWGHNGYSQLGNGTTN 145
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P ++ V EV CGS H+ L + + +G GQ+G G
Sbjct: 146 QGIAP--VQVCTNLLIKQVIEVACGSHHSMALA--------ADGELFAWGYNNCGQVGSG 195
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P +V +V++ CG + V +G+V+ WG N L
Sbjct: 196 STANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNG------NGQLGLGN 249
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
G+ ++P+ ++ HG Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 250 NGNQLTPVRVA--ALHGMCVN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGSKN 303
Query: 354 DFFAPAIVL 362
+ +P ++
Sbjct: 304 NLLSPTQIM 312
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
AP+++C+ V G S+A+ G L+ WG NC G S + TP
Sbjct: 149 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTP 203
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L
Sbjct: 204 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLT 255
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G+ +
Sbjct: 256 PVRVAALH---GMCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGSKNN 304
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 305 LLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMWGQCRG 347
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 117/281 (41%), Gaps = 41/281 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L ++ G ++ WG+ L + +T G + V T +
Sbjct: 108 IKSLSYGSGPHVLLTTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 161
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 162 VIEVACGSHHSMALAADGELF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 211
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G + L P +V L
Sbjct: 212 TKRVVNIACGQTSSMAVL------DSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 262
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG HT ++ G +++WG T + G L+S
Sbjct: 263 HGMCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGSKNNLLSPTQI 311
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
K + AC + HT G ++ WG RG+S +L
Sbjct: 312 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 352
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 76 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHN 134
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + ++VACG+ H++ + DG +L++
Sbjct: 135 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVIEVACGSHHSMALAADG-ELFA 183
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 184 WGYNNCGQVGSGSTANQPTPRKV 206
>gi|440898467|gb|ELR49962.1| RCC1 and BTB domain-containing protein 1 [Bos grunniens mutus]
Length = 531
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 32/290 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K C +L + ++ ++++G L SS G S+ P + G + +
Sbjct: 23 KACVFGTSANEALYVTDSDEVFVFG---LNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL 79
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ GS V L + ED V Y+WG N QLG G L P I+ V
Sbjct: 80 SYGSGPHVLLST-------EDGVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQV 130
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
EV CGS H+ L + + +G GQ+G G+T + P +V
Sbjct: 131 VEVACGSHHSMALA--------ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR 182
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V + CG + V G+V+ WG N L G+ ++P+ ++ H
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVC 234
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q+ CG AHT+ +TD+G L++WG G LGTG + +PA ++
Sbjct: 235 VN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 135/340 (39%), Gaps = 53/340 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKNNLLSPAHI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S L T FA
Sbjct: 280 MVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 340 AVTWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|356501809|ref|XP_003519716.1| PREDICTED: uncharacterized protein LOC100778984 [Glycine max]
Length = 1122
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 91/317 (28%), Positives = 143/317 (45%), Gaps = 46/317 (14%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL- 112
G P +E + TN + V G S A+ ++G L+ WG+ T G L
Sbjct: 343 FGRPHLVESLAITN------VTFVACGEYHSCAVSSSGDLFTWGD------GTHGAGLLG 390
Query: 113 ----VSSFTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
VS + P V G VV VACG+ H S G+ ++ G G L
Sbjct: 391 HGTDVSYWIPKRVSGPLEGLQVVSVACGTWHSALATSNGK--------LFTIGDGRFGVL 442
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN--DMLESMCWTFGLG 225
G GDR+S PK ++ S +V CG +H+A + P+ + +T+G G
Sbjct: 443 GHGDRDSVAYPKEVQLL---SGHKAIKVACGVWHSAAIIEVMGPSGSNTSAKRLFTWGDG 499
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKGLGLC 284
+ +LGH ++ L P V + +Y + V CG T ++++G V++ G G
Sbjct: 500 DQYRLGHVNKETYLEPTCVAAVAEYNFH-QVACGYTMTVALTTSGHVFTMGGTAYGQLGN 558
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
PN+ D PIL+ G +F + +++CGA H ++T +L++WGRG +
Sbjct: 559 PNS--------DGKVPILVRGKLVG--EFVE--EISCGANHVAVLTSRS-ELYTWGRGAN 605
Query: 345 GVLGTGKTIDFFAPAIV 361
G LG G T D +P +V
Sbjct: 606 GRLGHGDTDDQKSPTMV 622
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 128/288 (44%), Gaps = 41/288 (14%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG + +S++G SL S TP P+ V ++ G H+ +
Sbjct: 259 IESLGDVYIWGEVWVDGNSSDGLGSLASCKTDVLTPKPLESDVVLDVHQIGPGDRHIALV 318
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG ++ G+LG G + RP ++E+ + V V CG +H+
Sbjct: 319 TRQGEVF--------TWGEDSGGRLGHGFEKDFGRPHLVESL---AITNVTFVACGEYHS 367
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
++ D+ W G G LGHGT S +P++V + + +VSV CG +H
Sbjct: 368 CAVSS---SGDLF---TWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVSVACGTWH 421
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+++ +S G +++ G + G+ + R+ L+SG+ ++VACG
Sbjct: 422 SALATSNGKLFTIG-DGRFGVLGHGD--RDSVAYPKEVQLLSGH--------KAIKVACG 470
Query: 323 AAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H+ + + +L++WG G LG + P V
Sbjct: 471 VWHSAAIIEVMGPSGSNTSAKRLFTWGDGDQYRLGHVNKETYLEPTCV 518
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+A L+ WG+ D G + + P+ V + +VACG VAL ++G
Sbjct: 489 SAKRLFTWGDG---DQYRLGHVNKETYLEPTCVAAVAEYNFHQVACGYTMTVALTTSGHV 545
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEVTCGSFHTAL 204
+ + G GQLG + + ++ R K++ F V E++CG+ H A+
Sbjct: 546 F--------TMGGTAYGQLGNPNSDGKVPILVRGKLVGEF-------VEEISCGANHVAV 590
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
LT R S +T+G G NG+LGHG T P V+ L ++ ++ CG TS
Sbjct: 591 LTSR--------SELYTWGRGANGRLGHGDTDDQKSPTMVEALKDR-HIKNISCGSTFTS 641
Query: 265 VV 266
+
Sbjct: 642 CI 643
>gi|300794911|ref|NP_001178141.1| RCC1 and BTB domain-containing protein 1 [Bos taurus]
gi|296481892|tpg|DAA24007.1| TPA: regulator of chromosome condensation (RCC1) and BTB (POZ)
domain containing protein 1 [Bos taurus]
Length = 531
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 32/290 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K C +L + ++ ++++G L SS G S+ P + G + +
Sbjct: 23 KACVFGTSANEALYVTDSDEVFVFG---LNYSSCLGTGDNHSTLVPKKLEALCGKKIKSL 79
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ GS V L + ED V Y+WG N QLG G L P I+ V
Sbjct: 80 SYGSGPHVLLST-------EDGVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQV 130
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
EV CGS H+ L + + +G GQ+G G+T + P +V
Sbjct: 131 VEVACGSHHSMALA--------ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR 182
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V + CG + V G+V+ WG N L G+ ++P+ ++ H
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVC 234
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q+ CG AHT+ +TD+G L++WG G LGTG + +PA ++
Sbjct: 235 VN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 135/340 (39%), Gaps = 53/340 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKNNLLSPAHI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S L T FA
Sbjct: 280 MVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 340 AVTWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|413946332|gb|AFW78981.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 1009
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 135/294 (45%), Gaps = 40/294 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + AI +G L+ WG+ ++ G + S + P V G V+ V+CG
Sbjct: 300 VACGEFHTCAITASGDLYTWGD-GYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCG 358
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S H S+G+ + ++G G LG G+R + PK +ET S + +V
Sbjct: 359 SWHSALTTSSGKVF--------TFGDGTFGALGHGNRHTVAYPKEVETL---SGFRTIKV 407
Query: 196 TCGSFHTALL--THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +H+A + T + +++ +T+G G+ LGHG + LVP V+ L Y +
Sbjct: 408 ACGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCVQSLIDYNFH 467
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG T +S++G V++ G S + + G+ S +G H
Sbjct: 468 -QVACGHSMTIALSTSGHVFTMG-----------SSSNGQLGNPKS------DGKHPTPV 509
Query: 314 QDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CG+ H ++T ++++WG G +G LG G D P +V
Sbjct: 510 QDRLAGELVEEISCGSCHVAVLTSRS-EVYTWGMGANGRLGHGGVEDKKKPTLV 562
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 119/290 (41%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG EG + + S P P+ V ++ACG H+
Sbjct: 199 IESLGDVYVWGEVWTDMIPAEGSANYLCSKADILIPKPLESDVVLDVQQIACGYRHIALT 258
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E + V V CG FHT
Sbjct: 259 TRQGEVF--------AWGEELGGRLGHGTDADISRPKLVEALAVSN---VEYVACGEFHT 307
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T D+ W G G LGHG S +P++V + V ++SV CG +H
Sbjct: 308 CAIT---ASGDL---YTWGDGYYNAGLLGHGAGTSHWLPKRVSGPLEGVQVLSVSCGSWH 361
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ +S+G V+++ G LG ++ + + +S ++VA
Sbjct: 362 SALTTSSGKVFTFGDGTFGALGHGNRHTVAYPKEVETLSGFRT-------------IKVA 408
Query: 321 CGAAHTVLVTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ + + KL++WG G LG G P V
Sbjct: 409 CGLWHSAAIVETTNQAGVNVISRKLFTWGAGDKNPLGHGDKDARLVPTCV 458
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 101/251 (40%), Gaps = 73/251 (29%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHT 128
+++ SV G S ++G ++ +G+ T G + T P V G
Sbjct: 350 VQVLSVSCGSWHSALTTSSGKVFTFGD------GTFGALGHGNRHTVAYPKEVETLSGFR 403
Query: 129 VVKVACGSEHVVALV----SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET- 183
+KVACG H A+V AG L ++WGA + LG GD+++RL P +++
Sbjct: 404 TIKVACGLWHSAAIVETTNQAGVNVISRKL--FTWGAGDKNPLGHGDKDARLVPTCVQSL 461
Query: 184 ----FNQ----------------------------DSPWA----------------VYEV 195
F+Q +P + V E+
Sbjct: 462 IDYNFHQVACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKHPTPVQDRLAGELVEEI 521
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
+CGS H A+LT R S +T+G+G NG+LGHG + P V+ L ++ S
Sbjct: 522 SCGSCHVAVLTSR--------SEVYTWGMGANGRLGHGGVEDKKKPTLVEALKDR-HVKS 572
Query: 256 VDCGLFHTSVV 266
+ CG T+ +
Sbjct: 573 IACGSNFTTCI 583
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 63/137 (45%), Gaps = 23/137 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKV 132
V G M++A+ +G ++ G N L + ++G P+PV D G V ++
Sbjct: 469 VACGHSMTIALSTSGHVFTMGSSSNGQLGNPKSDGKH-------PTPVQDRLAGELVEEI 521
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CGS HV L S E Y +WG NG+LG G E + +P ++E V
Sbjct: 522 SCGSCHVAVLTSRSEVY--------TWGMGANGRLGHGGVEDKKKPTLVEALKDRH---V 570
Query: 193 YEVTCGS-FHTALLTHR 208
+ CGS F T + H+
Sbjct: 571 KSIACGSNFTTCICIHK 587
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 54/113 (47%), Gaps = 18/113 (15%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG H ++ + G+V++WG E G LG +A ++R + +A++
Sbjct: 248 IACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA-------------V 294
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
+ VACG HT +T G L++WG G +G+LG G + P V P
Sbjct: 295 SNVEYVACGEFHTCAITASG-DLYTWGDGYYNAGLLGHGAGTSHWLPKRVSGP 346
>gi|326677630|ref|XP_003200872.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Danio
rerio]
Length = 4647
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 126/281 (44%), Gaps = 38/281 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 131
K+ S K +LA+ G ++ WG+ D G G S + G VV
Sbjct: 457 KVSSSKGSDGHTLAVTAEGEVFSWGDG---DYGKLGHGNSATQKYPKIIQGPLLGKVVVC 513
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+ G H A+ + GE Y+WG + G+LG D SR P +++ +
Sbjct: 514 VSAGYRHSAAVTNDGE--------LYTWGEGDFGRLGHSDSHSRNVPTLVKDIS-----G 560
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS HT + R + W+FG G+NG+LGHG T P+ ++ L ++
Sbjct: 561 VGQVACGSSHTIAVAQDGR-------IVWSFGGGDNGKLGHGDTNRVYRPKVIEALHGFI 613
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V G + ++SAG V++WG LG C ++ T ++ P LI
Sbjct: 614 -IRKVCAGSQSSLALTSAGQVFAWGCGSCLG-CGSSETT------SLRPRLI-----EEL 660
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ ++CG +H + ++ + ++++WG G G G T
Sbjct: 661 SITKIIDISCGDSHCLALSHEN-EVFAWGNNAMGQCGQGHT 700
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ PK + + V HT +T E
Sbjct: 426 GKGSYGRLGLGDSNNQSMPKKLVLEPPRTMRKVSSSKGSDGHTLAVT--------AEGEV 477
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ +V V G H++ V++ G++++WG
Sbjct: 478 FSWGDGDYGKLGHGNSATQKYPKIIQGPLLGKVVVCVSAGYRHSAAVTNDGELYTWGEGD 537
Query: 280 GLGLCPNASLTRNEAGDAISPIL---ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + S +RN P L ISG G QVACG++HT+ V DG +
Sbjct: 538 FGRLGHSDSHSRN------VPTLVKDISGVG----------QVACGSSHTIAVAQDGRIV 581
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
WS+G G +G LG G T + P ++
Sbjct: 582 WSFGGGDNGKLGHGDTNRVYRPKVI 606
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 93/201 (46%), Gaps = 52/201 (25%)
Query: 116 FTPSPVWDFHGHTVVKVAC--GSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+TP+ + G+ V ++ GS+ H +AL GE + SWG + G+LG G+
Sbjct: 3931 YTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVF--------SWGDGDYGKLGHGNS 3982
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
E + RPK IE + V ++ CG H+A++T + +TFG G++G+LG
Sbjct: 3983 ERQRRPKQIEGLQGEE---VVQLACGFKHSAVVT--------ADGKLFTFGSGDSGRLGQ 4031
Query: 233 GTTQSALVPEQVKEL----------------------PQY------VYLVSVDCGLFHTS 264
+T + ++PE+V L PQ V++ + G H
Sbjct: 4032 RSTSNKMIPERVTALDGHHIGQRLIGLPDAMLKNHNRPQIIPALEGVFIEDIAVGCEHIL 4091
Query: 265 VVSSAGDVWSWG--MEKGLGL 283
+S+ GDV++WG E LGL
Sbjct: 4092 ALSNTGDVYAWGCNCEAQLGL 4112
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 86/207 (41%), Gaps = 28/207 (13%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG +GQL + + P + + +Q +V CG T L+
Sbjct: 3863 YLWGNGRHGQLADAGTSASV-PTLAPSLSQ-----TQQVVCGQNCTFLV--------QAN 3908
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSSAGDVWS 274
G G G+LG G + P + L YV LV+ H+ ++ G+V+S
Sbjct: 3909 GTVLAVGEGSYGRLGQGNSDDLYTPTIISALQGYVVTQLVTSYGSDGHSLALTETGEVFS 3968
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + G + + R I G + ++ VQ+ACG H+ +VT DG
Sbjct: 3969 WG-DGDYGKLGHGNSERQRRPKQI----------EGLQGEEVVQLACGFKHSAVVTADG- 4016
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
KL+++G G SG LG T + P V
Sbjct: 4017 KLFTFGSGDSGRLGQRSTSNKMIPERV 4043
Score = 38.9 bits (89), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 11/89 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P + G + +A G EH++AL + G+ Y +WG N QLGLG
Sbjct: 4069 PQIIPALEGVFIEDIAVGCEHILALSNTGDVY--------AWGCNCEAQLGLGHSNPVKE 4120
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLT 206
P ++ T + + +++ G H++ T
Sbjct: 4121 PILVTTLQGKN---IRQISAGRCHSSAWT 4146
>gi|328701601|ref|XP_001942852.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1
[Acyrthosiphon pisum]
Length = 4257
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 131/281 (46%), Gaps = 36/281 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVK 131
++ S K SLA+ + G ++ WG+ D G + + P + F G +
Sbjct: 427 QVSSSKGCDGHSLALSDTGEVYSWGD---GDYGKLGHGDVATHKEPKLIQGPFIGKVIEL 483
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+ G H A+ S G+ Y+WG ++G+LG GD R P ++++ + D P
Sbjct: 484 VSAGYRHSAAVTSDGQ--------LYTWGEGDHGRLGHGDCNPRFIPTLVKSLS-DMP-- 532
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V CGS HT L + N + W+FG G+NG+LGHG T P++++ L Y
Sbjct: 533 VGYVACGSTHT--LACSRDGNTV-----WSFGSGDNGKLGHGNTIRLYKPQKIEGLRHY- 584
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V G+ + ++ G+V++WG LG C ++ +T SP ++
Sbjct: 585 KIKKVAAGIHFSVALTCTGEVFTWGQGSNLG-CGSSEIT------LFSPAVVEDLMQ--- 634
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
Q + ++ G +H + +T + +++WG G G G +
Sbjct: 635 --QMIIDISVGDSHCLALTRNC-AVYAWGSNGKGQCGQGHS 672
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 118/279 (42%), Gaps = 38/279 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
SLA+ G ++ WG+ D G + P + + V++VACG +H L
Sbjct: 3493 SLALTETGEVFSWGD---GDFGKLGHGNNERQRKPKLIESLYDVVVIQVACGHKHSAVLS 3549
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPWAVYEVTCGSFHT 202
GE Y +G+ +G+LGLG ++ RP KI+ + + CG HT
Sbjct: 3550 QDGEVY--------VFGSAEHGKLGLGGHINKKRPTKIV----HKGFLNIKYIACGQNHT 3597
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+ E++ W FG GE G+LG G+ + VP+++ L + CG
Sbjct: 3598 ICIG---------ENVVWAFGEGEGGKLGIGSKKDIYVPQEIITL-NGKNIKKAYCGNGF 3647
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
T +S G+++S G S +A D + + + Q VA G
Sbjct: 3648 TMFLSEDGELYSCG-----------SDNLQDATDVLYTEKLIPEKIFEFQGQIVTDVATG 3696
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H +++T G+ +W+WG G+LG G + P I+
Sbjct: 3697 PDHVLVLTARGH-VWAWGNNCEGILGFGHDLPVQKPMII 3734
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 93/203 (45%), Gaps = 29/203 (14%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G N+ G+LGLG+ ++ PK I N C AL +D E
Sbjct: 398 GKNSYGRLGLGNSSNQPVPKRI-NINCKIKQVSSSKGCDGHSLAL-------SDTGEVYS 449
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKE--LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
W G G+ G+LGHG + P+ ++ + + + LVS G H++ V+S G +++WG
Sbjct: 450 W--GDGDYGKLGHGDVATHKEPKLIQGPFIGKVIELVS--AGYRHSAAVTSDGQLYTWG- 504
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISG--NGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
+G + L + P L+ + P G VACG+ HT+ + DG
Sbjct: 505 -EG----DHGRLGHGDCNPRFIPTLVKSLSDMPVG-------YVACGSTHTLACSRDGNT 552
Query: 336 LWSWGRGRSGVLGTGKTIDFFAP 358
+WS+G G +G LG G TI + P
Sbjct: 553 VWSFGSGDNGKLGHGNTIRLYKP 575
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 111/271 (40%), Gaps = 36/271 (13%)
Query: 94 WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGED 153
++WGN ++ ++P + +F ++ CG L S G
Sbjct: 3395 YLWGNGRNGQLGDTAVGQCINIWSPIKIQNFK--IAQRIVCGQNCTFVLTSQG------- 3445
Query: 154 LVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
S G N G+LG G +S +I V H+ LT
Sbjct: 3446 -TVLSCGEGNYGRLGHGHSDSLPNLTMISALQGFVITQVSTSIGSDGHSLALTETGE--- 3501
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
+++G G+ G+LGHG + P+ ++ L V ++ V CG H++V+S G+V+
Sbjct: 3502 -----VFSWGDGDFGKLGHGNNERQRKPKLIESLYDVV-VIQVACGHKHSAVLSQDGEVY 3555
Query: 274 SWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+G E G LGL + + R P I G K+ +ACG HT+ + +
Sbjct: 3556 VFGSAEHGKLGLGGHINKKR--------PTKIVHKGFLNIKY-----IACGQNHTICIGE 3602
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ +W++G G G LG G D + P ++
Sbjct: 3603 N--VVWAFGEGEGGKLGIGSKKDIYVPQEII 3631
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 89/206 (43%), Gaps = 26/206 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG+N++ Q G E P+++ + + V +V G + T ++ +
Sbjct: 345 FMWGSNSSNQHAEGATEVTDIPRLVRSLSD-----VQQVEAGQYCTFIIDTKG-----CV 394
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
S C G G+LG G + + VP+++ + + S H+ +S G+V+SWG
Sbjct: 395 SAC---GKNSYGRLGLGNSSNQPVPKRININCKIKQVSSSKGCDGHSLALSDTGEVYSWG 451
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYK 335
+ G L + P LI GP ++ V+ G H+ VT DG +
Sbjct: 452 -DGDYG-----KLGHGDVATHKEPKLI-----QGPFIGKVIELVSAGYRHSAAVTSDG-Q 499
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
L++WG G G LG G F P +V
Sbjct: 500 LYTWGEGDHGRLGHGDCNPRFIPTLV 525
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 62/133 (46%), Gaps = 18/133 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI V AG S+A+ G ++ WG S+ G S ++ F+P+ V D ++ +
Sbjct: 585 KIKKVAAGIHFSVALTCTGEVFTWGQ----GSNLGCGSSEITLFSPAVVEDLMQQMIIDI 640
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RP-KIIETFNQDSPW 190
+ G H +AL + Y+WG+N GQ G G S + RP K+I +
Sbjct: 641 SVGDSHCLALT--------RNCAVYAWGSNGKGQCGQGHSTSPVSRPSKVINLEGKQ--- 689
Query: 191 AVYEVTCGSFHTA 203
+ +++ G+ H+
Sbjct: 690 -INQISAGTSHSV 701
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 44/105 (41%), Gaps = 11/105 (10%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
G ++ + G L+ G+ L D++ P +++F G V VA G +HV
Sbjct: 3644 GNGFTMFLSEDGELYSCGSDNLQDAT---DVLYTEKLIPEKIFEFQGQIVTDVATGPDHV 3700
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
+ L + G + +WG N G LG G +P II+
Sbjct: 3701 LVLTARGHVW--------AWGNNCEGILGFGHDLPVQKPMIIQIL 3737
>gi|344281814|ref|XP_003412672.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Loxodonta
africana]
Length = 531
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/290 (26%), Positives = 122/290 (42%), Gaps = 32/290 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K C G +L + + ++++G + S+ G S+ P + G + +
Sbjct: 23 KACVFGTSGNEALYVTDNDEVFVFG---MNYSNCLGTGDNQSTLVPKKLEALCGKKIKSL 79
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ GS V L + ED V Y+WG N QLG G + P I+ V
Sbjct: 80 SYGSAPHVLLST-------EDGVVYAWGHNGYSQLGNGTTNQGVAP--IQVCTNLLIKQV 130
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
EV CGS H+ L + + +G GQ+G G+T + P +V
Sbjct: 131 VEVACGSHHSMALA--------ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKK 182
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V + CG + V G+V+ WG N L G+ ++P+ ++ H
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVC 234
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q+ CG AHT+ +TD+G L++WG G LGTG + +PA VL
Sbjct: 235 VN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGNKNNLLSPAHVL 280
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API++C+ V G S+A+ G ++ WG NC G S + TP
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHIKKVVGIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G +
Sbjct: 224 PVRVAALHS---VCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGNKNN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P V + V ++ C HTS + +G+V+ WG +G
Sbjct: 273 LLSPAHVLVEKERVVEIAA-CHSAHTSAAKTQSGNVYMWGQCRG 315
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 88/347 (25%), Positives = 136/347 (39%), Gaps = 53/347 (15%)
Query: 91 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ WG+ L + +T G + + T + VV+VACGS H +AL + GE
Sbjct: 94 GVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLI-----KQVVEVACGSHHSMALAADGE 148
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+ +WG NN GQ+G G ++ P+ + N V + CG T
Sbjct: 149 VF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLHIKKVVGIACGQ------TS 192
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
D E W G NGQLG G + L P +V L V + + CG HT ++
Sbjct: 193 SMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL-HSVCVNQIVCGYAHTLALT 249
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
G +++WG T + G L+S K + AC +AHT
Sbjct: 250 DEGLLYAWGAN-----------TYGQLGTGNKNNLLSPAHVLVEKERVVEIAACHSAHTS 298
Query: 328 LVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 378
++ WG RG+S L T FA V W L+ E +D L
Sbjct: 299 AAKTQSGNVYMWGQCRGQSVTLPHLTHFSCTDDVFACFATPAVTWRLLSVE-HEDFLTVA 357
Query: 379 GLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLSVM-ERYASILH 424
E ++ + E D K + + + ++ L + E + S+ H
Sbjct: 358 ----ESLKQEFDSPETADLKFRIDGKYIHVHKAVLKIRCEHFRSMFH 400
>gi|345325025|ref|XP_001513851.2| PREDICTED: RCC1 and BTB domain-containing protein 1
[Ornithorhynchus anatinus]
Length = 531
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED + Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGIVYAWGHNGYSQLGNGTTNQGIAP--IQICTNLMIKQVTEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
D E W G GQ+G G+T + P +V +VS+ CG + V G+
Sbjct: 145 -DDGEVYAW--GYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P ++ H +Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPCRVAA--LHSVCV---LQIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKSNLLSPAQIM 280
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 99/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API+IC+ V G S+A+ + G ++ WG NC G S + TP
Sbjct: 117 APIQICTNLMIKQVTEVACGSHHSMALADDGEVYAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G +
Sbjct: 224 PCRVAALHS---VCVLQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGNKSN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPAQIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMWGQCRG 315
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 134/340 (39%), Gaps = 53/340 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GIVYAWGHNGYSQLGNGTTNQGIAPIQICTNLMI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACGS H +AL GE Y +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VTEVACGSHHSMALADDGEVY--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVSIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V ++ + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVLQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKSNLLSPAQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S L T FA
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSCTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 340 AVTWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|28874834|emb|CAC84086.1| ZR1 protein [Medicago sativa]
Length = 1035
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/320 (26%), Positives = 140/320 (43%), Gaps = 49/320 (15%)
Query: 52 LTIGAP---DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG 108
+ I +P DSL D I++ V G + A+ ++G ++ WG D EG
Sbjct: 342 MDISSPKIVDSLSD---------IRVKKVACGEYHTCALTDSGDVYTWGKDSCSDLVDEG 392
Query: 109 GFS---LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
L F+ PV G ++ +ACG H + S G + ++G G
Sbjct: 393 RIRSQWLTHKFSL-PV---EGISISSIACGEWHTAIVSSCGRLF--------TYGDGTFG 440
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----THRKRPNDMLESMCWT 221
LG G+ S PK +E+ V V CG++HTA + R + N + +T
Sbjct: 441 VLGHGNYHSFSSPKEVESLK---GLCVRSVACGTWHTAAIIEVSAERFKYNTSTGKL-FT 496
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
+G + G+LGH + LVP V +L Y + V V CG T +++ G V++ G K
Sbjct: 497 WGDADEGRLGHADNVNKLVPTCVSQLVDYDF-VQVSCGRMMTLALTNMGKVFAMGSAK-Y 554
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G N + +++ G K + ++CG+ H ++T G +++WG+
Sbjct: 555 GQLGNPHVKDR-------AVVVEGM----LKQEYVKMISCGSYHVAVLTSSG-SVYTWGK 602
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G +G LG G T + + P V
Sbjct: 603 GENGELGLGDTENRYTPCFV 622
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 41/182 (22%)
Query: 32 DGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+G+LG + + N LVP + Q + V G MM+LA+ N
Sbjct: 502 EGRLGHADNVNKLVPTCVSQLV------------------DYDFVQVSCGRMMTLALTNM 543
Query: 91 GALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ G+ L + + +V V ++CGS HV L S+G
Sbjct: 544 GKVFAMGSAKYGQLGNPHVKDRAVVVEGM-------LKQEYVKMISCGSYHVAVLTSSGS 596
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLT 206
Y +WG NG+LGLGD E+R P +E V +TCG SF A+
Sbjct: 597 VY--------TWGKGENGELGLGDTENRYTPCFVEALRDRQ---VDTITCGPSFTVAICL 645
Query: 207 HR 208
H+
Sbjct: 646 HK 647
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+ G L+ WG+ D G V+ P+ V + V+V+CG +AL + G+
Sbjct: 490 STGKLFTWGD---ADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKV 546
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ + G+ GQLG + + R ++E + V ++CGS+H A+LT
Sbjct: 547 F--------AMGSAKYGQLG--NPHVKDRAVVVEGMLKQE--YVKMISCGSYHVAVLTS- 593
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+T+G GENG+LG G T++ P V+ L
Sbjct: 594 -------SGSVYTWGKGENGELGLGDTENRYTPCFVEAL 625
>gi|356567509|ref|XP_003551961.1| PREDICTED: uncharacterized protein LOC100791947 [Glycine max]
Length = 1106
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 140/310 (45%), Gaps = 37/310 (11%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P +E S TN I V G + A+ +G L+ WG+ + G + VS +
Sbjct: 355 PKLIESLSNTN------IELVACGEYHTCAVTLSGDLYTWGDGTY-NYGLLGHGNQVSHW 407
Query: 117 TPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G V ++CG H + S+G+ +++G G LG GDR+S
Sbjct: 408 VPKRVNGPLEGIHVSSISCGPWHTAVVTSSGQ--------LFTFGDGTFGALGHGDRKSV 459
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ IE+ + CG +HTA ++ ++ +T+G G+ G+LG
Sbjct: 460 SLPREIESLKG---LRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 516
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG +S LVP V L + V+ CG T +S +G V++ +G C L
Sbjct: 517 HGDKESKLVPTCVVTLVEPNCQVA--CGHSMTVALSRSGHVYT------MGSCVYGQLGN 568
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+A D PI + G F + ++ACGA H ++T ++++WG+G +G LG G
Sbjct: 569 TQA-DGKLPIRVEGK--LSKSFVE--EIACGAYHVAVLTSR-TEVFTWGKGANGRLGHGD 622
Query: 352 TIDFFAPAIV 361
T D P +V
Sbjct: 623 TNDRNTPTLV 632
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 69/249 (27%), Positives = 109/249 (43%), Gaps = 47/249 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H + GE + SWG + G+LG G PK+IE+ + +
Sbjct: 314 VQNIACGGKHAALVTKQGEVF--------SWGEESGGRLGHGVDSDVPHPKLIESLSNTN 365
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENGQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G G LGHG S VP++V
Sbjct: 366 ---IELVACGEYHTCAVT--------LSGDLYTWGDGTYNYGLLGHGNQVSHWVPKRVNG 414
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ +++ S+ CG +HT+VV+S+G ++++ G LG S++ +++ +
Sbjct: 415 PLEGIHVSSISCGPWHTAVVTSSGQLFTFGDGTFGALGHGDRKSVSLPREIESLKGLRT- 473
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTI 353
VQ ACG HT V + KL++WG G G LG G
Sbjct: 474 ------------VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 521
Query: 354 DFFAPAIVL 362
P V+
Sbjct: 522 SKLVPTCVV 530
Score = 65.1 bits (157), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/262 (24%), Positives = 108/262 (41%), Gaps = 31/262 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + S+ G + + ++G L+ +G+ G S P + G V+
Sbjct: 419 IHVSSISCGPWHTAVVTSSGQLFTFGDGTF---GALGHGDRKSVSLPREIESLKGLRTVQ 475
Query: 132 VACGSEHVVA----LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
ACG H A +V + ++WG + G+LG GD+ES+L P + T +
Sbjct: 476 AACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKESKLVPTCVVTLVEP 535
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +V CG T L+ +T G GQLG+ T +P +V+
Sbjct: 536 N----CQVACGHSMTVALSR--------SGHVYTMGSCVYGQLGN-TQADGKLPIRVEGK 582
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + CG +H +V++S +V++WG KG N L + D +P L+
Sbjct: 583 LSKSFVEEIACGAYHVAVLTSRTEVFTWG--KGA----NGRLGHGDTNDRNTPTLV---- 632
Query: 308 PHGPKFQDPVQVACGAAHTVLV 329
K + +ACG T +
Sbjct: 633 -EALKDKQVKSIACGTNFTAAI 653
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G +L+P+ + E + + ++ CG H ++V+ G+V+SWG E G L
Sbjct: 295 GVKMDSLLPKAL-ESAVVLDVQNIACGGKHAALVTKQGEVFSWGEESG------GRLGHG 347
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTG 350
D P LI + VACG HT VT G L++WG G G+LG G
Sbjct: 348 VDSDVPHPKLIESLSNTNIEL-----VACGEYHTCAVTLSG-DLYTWGDGTYNYGLLGHG 401
Query: 351 KTIDFFAPAIVLWP 364
+ + P V P
Sbjct: 402 NQVSHWVPKRVNGP 415
>gi|81885004|sp|Q6NXM2.1|RCBT1_MOUSE RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Regulator of chromosome condensation and BTB
domain-containing protein 1
gi|44890811|gb|AAH67005.1| Regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Mus musculus]
Length = 531
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ P + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 61 STLVPKKLEALCGKKIKSLSYGSGPHVLLTT-------EDGVVYAWGHNGYSQLGNGTTN 113
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P ++ V EV CGS H+ L + + +G GQ+G G
Sbjct: 114 QGIAP--VQVCTNLLIKQVIEVACGSHHSMALA--------ADGELFAWGYNNCGQVGSG 163
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P +V +V++ CG + V +G+V+ WG N L
Sbjct: 164 STANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNG------NGQLGLGN 217
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
G+ ++P+ ++ HG Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 218 NGNQLTPVRVA--ALHGMCVN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGSKN 271
Query: 354 DFFAPAIVL 362
+ +P ++
Sbjct: 272 NLLSPTQIM 280
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
AP+++C+ V G S+A+ G L+ WG NC G S + TP
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G+ +
Sbjct: 224 PVRVAALH---GMCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGSKNN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMWGQCRG 315
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 116/281 (41%), Gaps = 41/281 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLTTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VIEVACGSHHSMALAADGELF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 TKRVVNIACGQ------TSSMAVLDSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGSKNNLLSPTQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
K + AC + HT G ++ WG RG+S +L
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + ++VACG+ H++ + DG +L++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVIEVACGSHHSMALAADG-ELFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|169808411|ref|NP_082040.2| RCC1 and BTB domain-containing protein 1 [Mus musculus]
gi|26329171|dbj|BAC28324.1| unnamed protein product [Mus musculus]
gi|148704196|gb|EDL36143.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1, isoform CRA_a [Mus musculus]
Length = 531
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ P + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 61 STLVPKKLEALCGKKIKSLSYGSGPHVLLTT-------EDGVVYAWGHNGYSQLGNGTTN 113
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P ++ V EV CGS H+ L + + +G GQ+G G
Sbjct: 114 QGIAP--VQVCTNLLIKQVIEVACGSHHSMALA--------ADGELFAWGYNNCGQVGSG 163
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P +V +V++ CG + V +G+V+ WG N L
Sbjct: 164 STANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNG------NGQLGLGN 217
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
G+ ++P+ ++ HG Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 218 NGNQLTPVRVA--ALHGMCVN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGSKN 271
Query: 354 DFFAPAIVL 362
+ +P ++
Sbjct: 272 NLLSPTQIM 280
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
AP+++C+ V G S+A+ G L+ WG NC G S + TP
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G+ +
Sbjct: 224 PVRVAALH---GMCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGSKNN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMWGQCRG 315
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 116/281 (41%), Gaps = 41/281 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLTTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VIEVACGSHHSMALAADGELF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 TKRVVNIACGQ------TSSMAVLDSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGSKNNLLSPTQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
K + AC + HT G ++ WG RG+S +L
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + ++VACG+ H++ + DG +L++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVIEVACGSHHSMALAADG-ELFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|410900470|ref|XP_003963719.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Takifugu rubripes]
Length = 1042
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 85/300 (28%), Positives = 135/300 (45%), Gaps = 50/300 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-----TPSPVWDFHGHT 128
I +V G +LA+++ G ++ WG ++G L ++F P +
Sbjct: 86 IVAVSGGESHTLALNDKGQIFSWG------LGSDGQLGL-NNFEECVRVPRNIKCLSDVQ 138
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQD 187
+ +VACG H AL G+ + SWG N GQLGLG S + P+II++ Q
Sbjct: 139 IAQVACGYRHSHALSKGGQVF--------SWGQNQFGQLGLGMHGSSISTPQIIQSL-QG 189
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P+A +++ G H+ +T L + +G + GQLG T P +K L
Sbjct: 190 IPFA--QLSAGGAHSFAIT--------LSGAVFGWGRNKFGQLGLNDTNDRWFPALLKSL 239
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILIS 304
+ ++ V CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 -RSQRVIYVSCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTNHEINPRKVFELM 292
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
GN Q++CG HT+ T K++S+G G +G LGT T + +PA V P
Sbjct: 293 GN--------IVTQISCGRQHTLAFTPSSGKMYSFGLGGNGQLGTRSTCNRKSPAPVKGP 344
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 116/272 (42%), Gaps = 45/272 (16%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P FHG V V CG +H V L+ G
Sbjct: 4 WGNASYGQLGL-GGIDEEIVIEPRKCEFFHGKKVCDVGCGLKHTVFLLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG + R +P+ + + + V+ G HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHEKPRKKPEHVVALDAQ---IIVAVSGGESHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GLG +GQLG + + VP +K L V + V CG H+ +S G V+S
Sbjct: 104 QIFSW--GLGSDGQLGLNNFEECVRVPRNIKCLSD-VQIAQVACGYRHSHALSKGGQVFS 160
Query: 275 WGMEK----GLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLV 329
WG + GLG+ G +IS P +I G F Q++ G AH+ +
Sbjct: 161 WGQNQFGQLGLGM----------HGSSISTPQII--QSLQGIPF---AQLSAGGAHSFAI 205
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T G ++ WGR + G LG T D + PA++
Sbjct: 206 TLSG-AVFGWGRNKFGQLGLNDTNDRWFPALL 236
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + AGG S AI +GA++ WG G + P+ + V+
Sbjct: 190 IPFAQLSAGGAHSFAITLSGAVFGWGRNKF---GQLGLNDTNDRWFPALLKSLRSQRVIY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPW 190
V+CG +H AL G +++GA GQLG + P K+ E
Sbjct: 247 VSCGEDHTAALTKEGGV--------FTFGAGGYGQLGHNSTNHEINPRKVFELMGN---- 294
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V +++CG HT T P+ ++FGLG NGQLG +T + P VK
Sbjct: 295 IVTQISCGRQHTLAFT----PSS---GKMYSFGLGGNGQLGTRSTCNRKSPAPVK 342
>gi|395521017|ref|XP_003764618.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Sarcophilus
harrisii]
Length = 531
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +VS+ CG + V G+
Sbjct: 145 ---ADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P ++ H +Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPCRVA--ALHSVCV---LQIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKSNLLSPAQIM 280
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API++C+ V G S+A+ G ++ WG NC G S + TP
Sbjct: 117 APIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G +
Sbjct: 224 PCRVAALHS---VCVLQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGNKSN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPAQIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMWGQCRG 315
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 132/329 (40%), Gaps = 48/329 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL + GE Y +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VIEVACGSHHSMALAADGEVY--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVSIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V ++ + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVLQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKSNLLSPAQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S +L T FA
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKD 388
V W L+ E + L E + D
Sbjct: 340 AVTWRLLSVEHEDFLTVAESLKKEFDSPD 368
>gi|428178434|gb|EKX47309.1| hypothetical protein GUITHDRAFT_137494 [Guillardia theta CCMP2712]
Length = 432
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 139/302 (46%), Gaps = 47/302 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVVKV 132
I V GG S+ + +G L C L D+ G L + S + G ++ V
Sbjct: 106 IKKVACGGAHSMIVTESGRLL---TCGLNDN---GQLGLGNLENASEFEEVKGTESIADV 159
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWA 191
A G H +A G+ Y+WG+N +GQLG D +L + E +D+P
Sbjct: 160 AAGFWHTLAASKKGK--------LYAWGSNKHGQLGHHDTAVKLAVEPQEILLLRDAP-- 209
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ +V CGS+H+ LT + +T+G G +G+LGHG+T+ +P++V+ L
Sbjct: 210 IKQVACGSYHSMALTK--------DGEVYTWGFGAHGRLGHGSTEDEFMPKRVEALVGE- 260
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ S+ G ++S VS++G V+ WG L + + D ++P+++
Sbjct: 261 NISSIHAGFEYSSAVSTSGKVFVWGYGHFY------VLGQGDKKDQLAPVVLD------- 307
Query: 312 KFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
F + Q+A G+ H V+ G L++WG G LG G +P I+L P + +
Sbjct: 308 -FPTSIRQLAFGSFHAAAVSHSGM-LFTWGHATHGPLGHG----LKSPNIILEPTVLDAP 361
Query: 371 KQ 372
Q
Sbjct: 362 AQ 363
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 74/265 (27%), Positives = 113/265 (42%), Gaps = 49/265 (18%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHG 126
APIK V G S+A+ G ++ WG + L STE F P V G
Sbjct: 208 APIK--QVACGSYHSMALTKDGEVYTWGFGAHGRLGHGSTE------DEFMPKRVEALVG 259
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+ + G E+ A+ ++G+ + WG + LG GD++ +L P ++
Sbjct: 260 ENISSIHAGFEYSSAVSTSGKVF--------VWGYGHFYVLGQGDKKDQLAPVVL----- 306
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV--PEQV 244
D P ++ ++ GSFH A ++H M +T+G +G LGHG ++ P +
Sbjct: 307 DFPTSIRQLAFGSFHAAAVSH--------SGMLFTWGHATHGPLGHGLKSPNIILEPTVL 358
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
Q V CG HT VV+ GDV+S+G+ L + L D P I
Sbjct: 359 DAPAQLQNSKQVACGSQHTLVVTGTGDVFSFGLGGQGQLGLGSDL------DHYEPKQI- 411
Query: 305 GNGPHGPKF--QDPVQVACGAAHTV 327
P+F + QVACG H +
Sbjct: 412 ------PRFVGKSLRQVACGLFHCI 430
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 86/191 (45%), Gaps = 50/191 (26%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV--------YLVSVDCGLFHTSVVSSAGD 271
W++G ++G+ G G A + E +++ P+ V + V CG H+ +V+ +G
Sbjct: 65 WSWGSADHGRGGSGGHTDAPIFEVIQKEPEKVEKPVLPAKLIKKVACGGAHSMIVTESGR 124
Query: 272 VWSWGM----EKGLGLCPNASLTRNEAG-DAISPILIS----------------GNGPHG 310
+ + G+ + GLG NAS G ++I+ + G+ HG
Sbjct: 125 LLTCGLNDNGQLGLGNLENASEFEEVKGTESIADVAAGFWHTLAASKKGKLYAWGSNKHG 184
Query: 311 --------------PK----FQD-PV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P+ +D P+ QVACG+ H++ +T DG ++++WG G G LG G
Sbjct: 185 QLGHHDTAVKLAVEPQEILLLRDAPIKQVACGSYHSMALTKDG-EVYTWGFGAHGRLGHG 243
Query: 351 KTIDFFAPAIV 361
T D F P V
Sbjct: 244 STEDEFMPKRV 254
>gi|339234781|ref|XP_003378945.1| putative HECT-domain protein [Trichinella spiralis]
gi|316978479|gb|EFV61464.1| putative HECT-domain protein [Trichinella spiralis]
Length = 994
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 136/283 (48%), Gaps = 45/283 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + SV G +A+ N G L+ WG+ E ++V+ + + + +V+
Sbjct: 112 IHVISVACGDAHCVALTNDGHLFSWGSNVYGQLGVER-MNVVAKARYPRIQEINLANIVQ 170
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H +AL S D V ++WG N++GQLG+G RES + P T N+
Sbjct: 171 IACGSNHSLALEST-------DGVLHAWGLNDHGQLGIGTRESFIGPT---TVNKLMGIP 220
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQ 249
+ ++ G+ H+ +LT P+ + FG G+N GQ+G + L P VK L +
Sbjct: 221 ICQLAAGASHSLVLT----PSGTV------FGWGKNMFGQIGQNEQRDILYPSLVK-LLR 269
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 305
++ + CG + V++ G ++++G + G G N+ L + + + +++
Sbjct: 270 TQKVIRLACGEDFSVAVTATGGLFTFGAGTYGQLGHG-NQNSELFPKQVMELMGSVVLD- 327
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
VACG HT+ +T++ KL+++G SG LG
Sbjct: 328 -------------VACGRCHTLAITEN--KLYAFGLNTSGQLG 355
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/359 (25%), Positives = 149/359 (41%), Gaps = 57/359 (15%)
Query: 15 TCFFMPFICYTSLNCC---MDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAP 71
+C + SL CC DGQLG G I + + K
Sbjct: 6 SCILKLILKSMSLLCCGNTSDGQLGLGG--------------IAEENVRSLTLVESTKNF 51
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW------DFH 125
+KI + G S+ + + G+++ GN +G + + W F
Sbjct: 52 LKIRQIACGRHHSVMLLDDGSVFSCGNNDFYQLGHDG-IKRKPNLYENLHWYIDVKQSFV 110
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE--SRLRPKIIET 183
G V+ VACG H VAL + G +SWG+N GQLG+ ++ R I+
Sbjct: 111 GIHVISVACGDAHCVALTNDGHL--------FSWGSNVYGQLGVERMNVVAKARYPRIQE 162
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
N + + ++ CGS H+ L + + + +GL ++GQLG GT +S + P
Sbjct: 163 INLAN---IVQIACGSNHSLAL-------ESTDGVLHAWGLNDHGQLGIGTRESFIGPTT 212
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V +L + + + G H+ V++ +G V+ WG + +NE D + P L+
Sbjct: 213 VNKL-MGIPICQLAAGASHSLVLTPSGTVFGWGKNMF------GQIGQNEQRDILYPSLV 265
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+ Q +++ACG +V VT G L+++G G G LG G P V+
Sbjct: 266 K-----LLRTQKVIRLACGEDFSVAVTATG-GLFTFGAGTYGQLGHGNQNSELFPKQVM 318
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 79/181 (43%), Gaps = 25/181 (13%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L IG +S + N I IC + AG SL + +G ++ WG
Sbjct: 199 LGIGTRESFIGPTTVNKLMGIPICQLAAGASHSLVLTPSGTVFGWGKNMFGQIGQNEQRD 258
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
++ PS V V+++ACG + VA+ + G +++GA GQLG G+
Sbjct: 259 IL---YPSLVKLLRTQKVIRLACGEDFSVAVTATGGL--------FTFGAGTYGQLGHGN 307
Query: 172 RESRLRPK-IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+ S L PK ++E V +V CG HT +T E+ + FGL +GQL
Sbjct: 308 QNSELFPKQVMELMGS----VVLDVACGRCHTLAIT---------ENKLYAFGLNTSGQL 354
Query: 231 G 231
G
Sbjct: 355 G 355
>gi|118351057|ref|XP_001008807.1| Kinesin motor domain containing protein [Tetrahymena thermophila]
gi|89290574|gb|EAR88562.1| Kinesin motor domain containing protein [Tetrahymena thermophila
SB210]
Length = 1264
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 139/329 (42%), Gaps = 55/329 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+ C V G S I N G + WG + G S + P+PV F ++V
Sbjct: 890 IQACQVSLGYHHSACISNQGQILTWGR---GNRGQLGHSSFENCLLPTPVNFFSKMSIVS 946
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V CG +H +AL + G +SWG +GQLGLGD +S+ P+ I + +
Sbjct: 947 VGCGWQHTLALSNDGR--------VFSWGFGEDGQLGLGDYQSQNSPQFINSL---EGYF 995
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP--EQVKELPQ 249
V ++ G H++++T E + FG + +L + T Q+ +P +++ L Q
Sbjct: 996 VTQINAGHSHSSVITS--------EGIFMMFGCNIDHRLMNKTNQNQFLPCITELEFLRQ 1047
Query: 250 Y----VYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGL-----CPNASLTRNEAGD-- 296
V G+ H++V++ G++++ G+ E LG PN+ + + + +
Sbjct: 1048 EYGSDYNAVKASLGVNHSAVITKNGNLYTSGLGNEGQLGSFISEDTPNSLMIQKNSNEMS 1107
Query: 297 --------------AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
I K +QV+CG + T LV ++ +++S+G+G
Sbjct: 1108 EYSKFEEEQQENQDQFDRICYFNKVNFFNKKNKAIQVSCGDSFT-LVINEQSQVYSFGKG 1166
Query: 343 RSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
LG +D V P L E K
Sbjct: 1167 SYYRLG---HLDIQTNQNVYEPKLIESLK 1192
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 98/227 (43%), Gaps = 43/227 (18%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ Y WG +G+LG+ + P+II +V+ G H+A +++
Sbjct: 861 IIYIWGNGKDGRLGIEGEKPFKFPQIIPNI------QACQVSLGYHHSACISN------- 907
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ T+G G GQLGH + ++ L+P V + + +VSV CG HT +S+ G V+S
Sbjct: 908 -QGQILTWGRGNRGQLGHSSFENCLLPTPVNFFSK-MSIVSVGCGWQHTLALSNDGRVFS 965
Query: 275 WGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV------QVACGAAHT 326
WG E G LGL GD S + P+F + + Q+ G +H+
Sbjct: 966 WGFGEDGQLGL-----------GDYQS--------QNSPQFINSLEGYFVTQINAGHSHS 1006
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQD 373
++T +G +G L + F P I L +E+ D
Sbjct: 1007 SVITSEGI-FMMFGCNIDHRLMNKTNQNQFLPCITELEFLRQEYGSD 1052
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 41/91 (45%), Gaps = 12/91 (13%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+ P + + V+ G H VA+ + G+ Y+WG N QLGLGD E
Sbjct: 1183 YEPKLIESLKNFKITSVSTGCRHAVAITNDGK--------VYTWGFNFYDQLGLGDSEKD 1234
Query: 176 L-RPKIIETFNQDSPWAVYEVTCGSFHTALL 205
+P + S V + +CG FHT++L
Sbjct: 1235 YQQPTKVTKL---SGLNVKQSSCGYFHTSVL 1262
>gi|405954130|gb|EKC21653.1| Putative E3 ubiquitin-protein ligase HERC1 [Crassostrea gigas]
Length = 2154
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 120/269 (44%), Gaps = 34/269 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+LA+ +G ++ WG+ D G + P + G V++++CG +H +
Sbjct: 1898 TLAVTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVIQLSCGFKHSAVVT 1954
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ +++G + G+LGLG ++ P + + V CG HT
Sbjct: 1955 ADGK--------LFTFGNGDYGRLGLGTTTNKKVPTRVVALESHQ---IGYVACGLNHTL 2003
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ + W FG G+ G+LG G T +P ++K L +V + V CG +
Sbjct: 2004 CVSADG-------TNVWAFGDGDFGKLGQGNTVGKHLPTKIKALQGHV-IKKVACGTQFS 2055
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+S G V++WG E+ +G P+ N ++ + G +D V CGA
Sbjct: 2056 VALSKYGKVFTWGQERLIGQ-PDTRGGSNCQPQEVASL-------SGYFIED---VVCGA 2104
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
HT+++T DG +W WG G LG G T
Sbjct: 2105 EHTLVLTSDG-DVWGWGSNSEGQLGLGHT 2132
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 71/146 (48%), Gaps = 20/146 (13%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-- 277
+++G G+ G+LGHG + P Q++ L Q ++ + CG H++VV++ G ++++G
Sbjct: 1908 FSWGDGDYGKLGHGNSDRQRRPRQIEAL-QGEEVIQLSCGFKHSAVVTADGKLFTFGNGD 1966
Query: 278 --EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
GLG N + P + H + VACG HT+ V+ DG
Sbjct: 1967 YGRLGLGTTTNKKV----------PTRVVALESHQIGY-----VACGLNHTLCVSADGTN 2011
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
+W++G G G LG G T+ P +
Sbjct: 2012 VWAFGDGDFGKLGQGNTVGKHLPTKI 2037
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 55/112 (49%), Gaps = 18/112 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPL---PDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I V G S+A+ G ++ WG L PD T GG S+ P V G+ +
Sbjct: 2045 IKKVACGTQFSVALSKYGKVFTWGQERLIGQPD--TRGG----SNCQPQEVASLSGYFIE 2098
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKII 181
V CG+EH + L S G+ + WG+N+ GQLGLG S +R P+++
Sbjct: 2099 DVVCGAEHTLVLTSDGDVW--------GWGSNSEGQLGLGHTNSPVREPQLV 2142
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 90/208 (43%), Gaps = 28/208 (13%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG+ NGQ+ G R + + P + +F+ ++ CG T ++ +
Sbjct: 1804 FLWGSGRNGQMCEGGRGAFV-PVRVPSFS-----CSQQIVCGQNCTFVVQN--------N 1849
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSSAGDVWS 274
G G G+LG G + + + +V L + HT V+ +G+V+S
Sbjct: 1850 GTVLACGEGSYGRLGQGNSDDLHSLTAISSIQGFVVTQLATSVGSDGHTLAVTESGEVFS 1909
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + G + + R I + + ++ +Q++CG H+ +VT DG
Sbjct: 1910 WG-DGDYGKLGHGNSDRQRRPRQIEAL----------QGEEVIQLSCGFKHSAVVTADG- 1957
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
KL+++G G G LG G T + P V+
Sbjct: 1958 KLFTFGNGDYGRLGLGTTTNKKVPTRVV 1985
>gi|408501216|ref|YP_006865135.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466040|gb|AFU71569.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1086
Score = 85.1 bits (209), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 95/321 (29%), Positives = 129/321 (40%), Gaps = 57/321 (17%)
Query: 63 DSKTNHKAPIKIC--SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFT 117
D KT P V AGG SLA+ + G + WG L D + G + V T
Sbjct: 609 DRKTYPDLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNVQGQLGDGTGTGRNTPVRVKT 668
Query: 118 PS-------PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
P P DF T V+V+ G +H +AL G D Y+WG N NGQLG G
Sbjct: 669 PDRKTYPDLPA-DF---TYVQVSAGGQHSLAL--------GSDGNAYAWGYNVNGQLGGG 716
Query: 171 -DRESRLRPKIIETFNQ----DSP--WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
+ R P +ET ++ D P + +V+ G +H+ L + W +G
Sbjct: 717 TSNDYRRTPVRVETPDRKTYPDLPADFTYVQVSAGRYHSLALGS--------DGNAWAWG 768
Query: 224 LGENGQLGHGTTQSALVPEQVK--------ELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
GQLG GT + P VK +LP V V G H+ + S G+ W+W
Sbjct: 769 SNFEGQLGDGTGTNRNTPVMVKTPDRSTYPDLPADFTYVQVSAGWLHSLALGSDGNAWAW 828
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILIS----GNGPHGPKFQDPVQVACGAAHTVLVTD 331
G L S T D +P+ + P PK QV+ H++ V
Sbjct: 829 GRNTNGQLGDGTSGT-----DRTAPVRVKMPDRNTYPDLPKDFTYAQVSAEGDHSLAVGS 883
Query: 332 DGYKLWSWGRGRSGVLGTGKT 352
DG W+WG G LG T
Sbjct: 884 DG-NAWAWGCNFYGPLGNNTT 903
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 94/329 (28%), Positives = 135/329 (41%), Gaps = 53/329 (16%)
Query: 63 DSKTNHKAPIKIC--SVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPS 119
D KT P V AGG SLA+ + G + WG N + GG S TP
Sbjct: 670 DRKTYPDLPADFTYVQVSAGGQHSLALGSDGNAYAWGYNV---NGQLGGGTSNDYRRTPV 726
Query: 120 PV------------WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
V DF T V+V+ G H +AL G D ++WG+N GQL
Sbjct: 727 RVETPDRKTYPDLPADF---TYVQVSAGRYHSLAL--------GSDGNAWAWGSNFEGQL 775
Query: 168 GLGDRESRLRPKIIETFNQ----DSP--WAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
G G +R P +++T ++ D P + +V+ G H+ L + W
Sbjct: 776 GDGTGTNRNTPVMVKTPDRSTYPDLPADFTYVQVSAGWLHSLALGS--------DGNAWA 827
Query: 222 FGLGENGQLGHGTTQS-ALVPEQVK--------ELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+G NGQLG GT+ + P +VK +LP+ V H+ V S G+
Sbjct: 828 WGRNTNGQLGDGTSGTDRTAPVRVKMPDRNTYPDLPKDFTYAQVSAEGDHSLAVGSDGNA 887
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+WG L N + + +A + S N K Q QV+ G +++ + D
Sbjct: 888 WAWGCNFYGPLGNNTTNWQGDANPVPKRVRDSANPTDKSKGQQATQVSGGYHYSLALGSD 947
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++WG SG LG G T D P V
Sbjct: 948 G-NAYAWGYNSSGQLGDGTTNDKSVPVPV 975
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/256 (26%), Positives = 103/256 (40%), Gaps = 42/256 (16%)
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKII-----ETFNQDSP--WAVYEVTCGSFHTA 203
G D Y+WG N NGQLG G R P ++ +T+ D P + +V+ G H+
Sbjct: 575 GSDGNAYAWGYNYNGQLGDGTSTERHAPVMVWMPDRKTY-PDLPADFTYVQVSAGGQHSL 633
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK--------ELPQYVYLVS 255
L + + +G GQLG GT P +VK +LP V
Sbjct: 634 ALGS--------DGNAYAWGYNVQGQLGDGTGTGRNTPVRVKTPDRKTYPDLPADFTYVQ 685
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISGNG----PHG 310
V G H+ + S G+ ++WG N L + D +P+ + P
Sbjct: 686 VSAGGQHSLALGSDGNAYAWGYNV------NGQLGGGTSNDYRRTPVRVETPDRKTYPDL 739
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV------LWP 364
P VQV+ G H++ + DG W+WG G LG G + P +V +P
Sbjct: 740 PADFTYVQVSAGRYHSLALGSDG-NAWAWGSNFEGQLGDGTGTNRNTPVMVKTPDRSTYP 798
Query: 365 PLTEEFKQDELNTGGL 380
L +F +++ G L
Sbjct: 799 DLPADFTYVQVSAGWL 814
>gi|118345495|ref|XP_976578.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila]
gi|89287995|gb|EAR85983.1| regulator of chromosome condensation (RCC1) [Tetrahymena
thermophila SB210]
Length = 722
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/229 (30%), Positives = 110/229 (48%), Gaps = 36/229 (15%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-GDRESRLRPKII 181
D+ V V S+ +A+ G +SWG +LG + ++ P I
Sbjct: 209 DYWEGNVESVKACSDFTIAIDKQGR--------IFSWGKGGFNRLGYKAEIVNQKHPLQI 260
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
E+ S + + + GSFH+A +T+ R +T+G NGQLGHG ++ + P
Sbjct: 261 ESL---SKQQIIQFSLGSFHSAAITNNGR--------LYTWGRDSNGQLGHGQAKADIFP 309
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
++V+ L Q Y+VSV CG HT +S +++SWG+ G AS E + P
Sbjct: 310 KEVQAL-QNTYIVSVACGEGHTLALSKNNELFSWGLNSS-GQLGRAS----ENLKSSDPK 363
Query: 302 LISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
IS F+D Q+ACG+ H++++ DG ++SWG + G LG
Sbjct: 364 KISF-------FEDKSIKQIACGSKHSLVLLQDG-TVYSWGSNQYGQLG 404
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 94/210 (44%), Gaps = 35/210 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-------LVSSFTPSPVWDFHG 126
+ SVKA ++AID G ++ WG +GGF+ +V+ P +
Sbjct: 215 VESVKACSDFTIAIDKQGRIFSWG---------KGGFNRLGYKAEIVNQKHPLQIESLSK 265
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+++ + GS H A+ + G Y+WG ++NGQLG G ++ + PK ++
Sbjct: 266 QQIIQFSLGSFHSAAITNNGR--------LYTWGRDSNGQLGHGQAKADIFPKEVQALQN 317
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ V CG HT L+ + N++ +++GL +GQLG + +
Sbjct: 318 T---YIVSVACGEGHTLALS---KNNEL-----FSWGLNSSGQLGRASENLKSSDPKKIS 366
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ + + CG H+ V+ G V+SWG
Sbjct: 367 FFEDKSIKQIACGSKHSLVLLQDGTVYSWG 396
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 13/115 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFTPSPVWDFHGHTVVKV 132
I SV G +LA+ L+ WG L S G S + S P + F ++ ++
Sbjct: 320 IVSVACGEGHTLALSKNNELFSWG---LNSSGQLGRASENLKSSDPKKISFFEDKSIKQI 376
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
ACGS+H + L+ +D YSWG+N GQLG D++S + I + N D
Sbjct: 377 ACGSKHSLVLL--------QDGTVYSWGSNQYGQLGF-DQDSNAQNTIASSQNVD 422
Score = 47.8 bits (112), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 68/315 (21%), Positives = 118/315 (37%), Gaps = 93/315 (29%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD----- 171
TP + D +VK+ CG+ H A+ + E Y+WG N +LGL D
Sbjct: 20 TPHLISDIS--NIVKIVCGANHSYAIDTNFE--------VYAWGCNLGRKLGLSDEYYNQ 69
Query: 172 -------RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 224
+ ++ K+ E N+ + ++ G+ H+ + ++ + CW G+
Sbjct: 70 IFQADIPEQIKIPVKVTELSNK----KINNISTGTNHSFAWS-----TELNQVYCW--GI 118
Query: 225 GENGQLGHGTTQSALVPEQVKELPQ----YVYLVSVDCGLFHTSVVSSAGDV-------- 272
GE G+LG+ ++ PE L Q + + CG HT V +V
Sbjct: 119 GEYGKLGNKESKDLQYPEIFNGLKQPEGIQWEISEISCGENHTVAVIKQINVNNSQSQNK 178
Query: 273 ---------WSWGMEKG--------LGLCPNASLTRNEAGDAISPILIS----------- 304
W G++ G L + P+ E+ A S I+
Sbjct: 179 LYVWGSSSDWQLGIDTGKTDYVNQPLEMSPDYWEGNVESVKACSDFTIAIDKQGRIFSWG 238
Query: 305 -------------GNGPHGPKF-----QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
N H + Q +Q + G+ H+ +T++G +L++WGR +G
Sbjct: 239 KGGFNRLGYKAEIVNQKHPLQIESLSKQQIIQFSLGSFHSAAITNNG-RLYTWGRDSNGQ 297
Query: 347 LGTGKT-IDFFAPAI 360
LG G+ D F +
Sbjct: 298 LGHGQAKADIFPKEV 312
>gi|23503098|sp|Q92834.2|RPGR_HUMAN RecName: Full=X-linked retinitis pigmentosa GTPase regulator;
Flags: Precursor
gi|119579846|gb|EAW59442.1| retinitis pigmentosa GTPase regulator, isoform CRA_b [Homo sapiens]
Length = 1020
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 127/278 (45%), Gaps = 50/278 (17%)
Query: 80 GGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
G S + L+M WG L G S +S P+ V V AC
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGL------GSKSAISK--PTCVKALKPEKVKLAAC 94
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H + G Y+ G NN GQLGLGD E R +I F S + +
Sbjct: 95 GRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNTFHVISFFT--SEHKIKQ 144
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
++ GS +A LT R + +G GQ+G + VP+QV + + V +
Sbjct: 145 LSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWI 195
Query: 255 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
S CG +H++ V++ G+++ +G E G LGL PN L G+ +P L+S P
Sbjct: 196 S--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----GNHRTPQLVS----EIP- 242
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 243 -EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|196012955|ref|XP_002116339.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
gi|190580930|gb|EDV21009.1| hypothetical protein TRIADDRAFT_64264 [Trichoplax adhaerens]
Length = 514
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 131/301 (43%), Gaps = 38/301 (12%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVK--AGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
L +G D + + P+ + +V GG ++A+ G ++ WG D G
Sbjct: 189 LGLGNCDDVNVPRQIPQLLPVMVTTVAIHPGGRHAMALTAEGKVYSWG---CGDRGQLGH 245
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ + P+ + + V K+ACG+ H +A++S G+ +SWG +NG LG
Sbjct: 246 GNTLGYLDPTLIDELKSKEVTKIACGAMHSIAVLSDGKI--------FSWGDGSNGALGH 297
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G+ ++L PK I + N + V CG +T + +D+ W++GLG NG+
Sbjct: 298 GNNLAQLLPKKIMSLNGKH---IMAVACGECYTIAVAG----DDV-----WSWGLGGNGE 345
Query: 230 LGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
LG+G S +P +++ L + + +V CG + VS+ G VW+WG S
Sbjct: 346 LGYGVEMPSYYMPTKIEAL-FFKGITNVACGYATSFAVSANGKVWAWG-----------S 393
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R G +++ G ++ + L D+ +++ WG G +G
Sbjct: 394 GDRFRLGLGNEKVIVKPREIQGDLKGKKIKRVVASLFHALAIDENGQVYIWGSQEIGPVG 453
Query: 349 T 349
Sbjct: 454 N 454
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 34/232 (14%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
T V + G H +AL + G+ Y SWG + GQLG G+ L P +I+
Sbjct: 212 TTVAIHPGGRHAMALTAEGKVY--------SWGCGDRGQLGHGNTLGYLDPTLIDELKSK 263
Query: 188 SPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V ++ CG+ H+ A+L+ K +++G G NG LGHG + L+P+++
Sbjct: 264 E---VTKIACGAMHSIAVLSDGK---------IFSWGDGSNGALGHGNNLAQLLPKKIMS 311
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L ++++V CG +T V+ DVWSWG+ L + I +
Sbjct: 312 L-NGKHIMAVACGECYTIAVA-GDDVWSWGLGGNGELGYGVEMPSYYMPTKIEALF---- 365
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
F+ VACG A + V+ +G K+W+WG G LG G P
Sbjct: 366 ------FKGITNVACGYATSFAVSANG-KVWAWGSGDRFRLGLGNEKVIVKP 410
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 96/222 (43%), Gaps = 37/222 (16%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG + + + G + + G + G LGLG+ + P+ I Q P
Sbjct: 162 IACGYDSLFVVSRNGGIF--------ACGKGHMGCLGLGNCDDVNVPRQIP---QLLPVM 210
Query: 192 VYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V G H LT E +++G G+ GQLGHG T L P + EL +
Sbjct: 211 VTTVAIHPGGRHAMALTA--------EGKVYSWGCGDRGQLGHGNTLGYLDPTLIDEL-K 261
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR-NEAGDAISPILISGNGP 308
+ + CG H+ V S G ++SWG N +L N + ++S NG
Sbjct: 262 SKEVTKIACGAMHSIAVLSDGKIFSWGDGS------NGALGHGNNLAQLLPKKIMSLNGK 315
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
H + VACG +T+ V D +WSWG G +G LG G
Sbjct: 316 H------IMAVACGECYTIAVAGD--DVWSWGLGGNGELGYG 349
Score = 39.3 bits (90), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 56/124 (45%), Gaps = 24/124 (19%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ CG VVS G +++ G GLG C + ++ R + P++++
Sbjct: 162 IACGYDSLFVVSRNGGIFACGKGHMGCLGLGNCDDVNVPRQIP--QLLPVMVT------- 212
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
V + G H + +T +G K++SWG G G LG G T+ + P ++ +E K
Sbjct: 213 ----TVAIHPGGRHAMALTAEG-KVYSWGCGDRGQLGHGNTLGYLDPTLI------DELK 261
Query: 372 QDEL 375
E+
Sbjct: 262 SKEV 265
>gi|110637510|ref|YP_677717.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
gi|110280191|gb|ABG58377.1| alpha-tubulin suppressor [Cytophaga hutchinsonii ATCC 33406]
Length = 911
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 119/284 (41%), Gaps = 45/284 (15%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
AP S+ A S+ + G +W WG P T+G + SPV
Sbjct: 470 APDDWISIAASNAFSMGLKANGTIWTWGLNPF---ETDGQYK-----NSSPVQTGSDQNW 521
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+A GS +++AL + G ++WG N +GQLG G + R+ PK I T +
Sbjct: 522 KSIATGSNYILALKADG--------TLWAWGDNFSGQLGDGTEQPRMLPKQIGTA---TT 570
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
W G + + W++G +G+LG GT LVP +V
Sbjct: 571 WVSIAAASGVQSFGI---------QADGSLWSWGHNYDGELGLGTNLKTLVPTRVGTGTD 621
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +S+ G+ HT + S G +W WG + G + +L + P+ + +
Sbjct: 622 W---ISIKTGVGHTLGIKSDGTLWGWGTNR-QGQLGDGTLV-----NKYVPVQLGTD--- 669
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+D + +A G H + + +G LW+WGR G +GTG I
Sbjct: 670 ----RDWINIAGGTIHNICLKSNG-TLWAWGRNNYGQVGTGNLI 708
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 130/315 (41%), Gaps = 61/315 (19%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + + + P+KI +V G +LA+ G LW WG L D +T
Sbjct: 151 LGDGTTMDRRTPVKIGIDINWVAVATGSSYTLALKADGTLWSWGKNQRGQLGDGTT---- 206
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEH----VVALVSAGETYKGEDLVCYSWGANNNGQ 166
+ +P V G+E + A S+G K + ++WG NN G+
Sbjct: 207 --IDRHSP-------------VQIGTEQTWTGIAACFSSGIGIKANGTL-WTWGFNNGGE 250
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG+G+ + + P + D W +Y V GS H L ++ W +GL E
Sbjct: 251 LGIGNNDEKHTPVQV---GADQNW-LYAV-AGSNHIVAL--------KVDGSLWGWGLNE 297
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
G++G+G T P +V + L + G HT + S G +W+WG G N
Sbjct: 298 AGEIGNGNTVQQDSPVRVGTDNDWTTLAA---GSNHTLAIKSNGTLWAWGHNV-RGNLGN 353
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
+ T + A P+ + + D ++V+ G H+V + +G LW+WG G
Sbjct: 354 GTATLDP---ATLPVQVGTDA-------DWIRVSAGLDHSVALKANG-TLWAWGYNVRGQ 402
Query: 347 LGTGKTIDFFAPAIV 361
LG G D P +
Sbjct: 403 LGYGSGTDKHLPVQI 417
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/375 (23%), Positives = 137/375 (36%), Gaps = 85/375 (22%)
Query: 38 SGSNSLVPCVIEQFL---------TIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAID 88
+GSN +V ++ L IG ++++ DS ++ AG +LAI
Sbjct: 276 AGSNHIVALKVDGSLWGWGLNEAGEIGNGNTVQQDSPVRVGTDNDWTTLAAGSNHTLAIK 335
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-----WDFHGHTVVKVACGSEHVVALV 143
+ G LW WG+ + + G +L + P V W ++V+ G +H VAL
Sbjct: 336 SNGTLWAWGHN-VRGNLGNGTATLDPATLPVQVGTDADW-------IRVSAGLDHSVALK 387
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G ++WG N GQLG G + P I T + W + G++HT
Sbjct: 388 ANG--------TLWAWGYNVRGQLGYGSGTDKHLPVQIGTAHT---WVA--INAGTYHTI 434
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+ + WT+G N QLG G T VP ++ P +S+ +
Sbjct: 435 GV--------KADGSLWTWGDNTNAQLGDGGTADQPVPHSIRTAPDD--WISIAASNAFS 484
Query: 264 SVVSSAGDVWSWGME----------------------KGLGLCPN------ASLTRNEAG 295
+ + G +W+WG+ K + N A T G
Sbjct: 485 MGLKANGTIWTWGLNPFETDGQYKNSSPVQTGSDQNWKSIATGSNYILALKADGTLWAWG 544
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK---------LWSWGRGRSGV 346
D S L G+G P+ P Q+ + G + LWSWG G
Sbjct: 545 DNFSGQL--GDGTEQPRML-PKQIGTATTWVSIAAASGVQSFGIQADGSLWSWGHNYDGE 601
Query: 347 LGTGKTIDFFAPAIV 361
LG G + P V
Sbjct: 602 LGLGTNLKTLVPTRV 616
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 46/321 (14%)
Query: 23 CYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGM 82
+T + C +G + +L +G ++ E + A AG
Sbjct: 220 TWTGIAACFSSGIGIKANGTLWTWGFNNGGELGIGNNDEKHTPVQVGADQNWLYAVAGSN 279
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
+A+ G+LW WG L ++ G + V +P V + T + A GS H +A+
Sbjct: 280 HIVALKVDGSLWGWG---LNEAGEIGNGNTVQQDSPVRVGTDNDWTTL--AAGSNHTLAI 334
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFH 201
S G ++WG N G LG G + L P + D+ W V+ G H
Sbjct: 335 KSNG--------TLWAWGHNVRGNLGNG--TATLDPATLPVQVGTDADW--IRVSAGLDH 382
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
+ L + N L W +G GQLG+G+ +P Q+ +V +++ G +
Sbjct: 383 SVAL----KANGTL----WAWGYNVRGQLGYGSGTDKHLPVQIGTAHTWV---AINAGTY 431
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF--QDPVQV 319
HT V + G +W+WG N + + G A P+ PH + D + +
Sbjct: 432 HTIGVKADGSLWTWG--------DNTNAQLGDGGTADQPV------PHSIRTAPDDWISI 477
Query: 320 ACGAAHTVLVTDDGYKLWSWG 340
A A ++ + +G +W+WG
Sbjct: 478 AASNAFSMGLKANG-TIWTWG 497
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 116/320 (36%), Gaps = 70/320 (21%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS-PVWDFHGHTVVKVACG 135
V AG S+A+ G LW WG + G S PV HT V + G
Sbjct: 376 VSAGLDHSVALKANGTLWAWG------YNVRGQLGYGSGTDKHLPVQIGTAHTWVAINAG 429
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD-------- 187
+ H + + + G ++WG N N QLG G + P I T D
Sbjct: 430 TYHTIGVKADGS--------LWTWGDNTNAQLGDGGTADQPVPHSIRTAPDDWISIAASN 481
Query: 188 -------SPWAVYEVTCGSFHTALLTHRKRP----------------NDML----ESMCW 220
+ ++ F T P N +L + W
Sbjct: 482 AFSMGLKANGTIWTWGLNPFETDGQYKNSSPVQTGSDQNWKSIATGSNYILALKADGTLW 541
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--ME 278
+G +GQLG GT Q ++P+Q+ +V + + + + + G +WSWG +
Sbjct: 542 AWGDNFSGQLGDGTEQPRMLPKQIGTATTWVSIAAASG--VQSFGIQADGSLWSWGHNYD 599
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
LGL N + P + G G D + + G HT+ + DG LW
Sbjct: 600 GELGLGTNLK--------TLVPTRV-GTG------TDWISIKTGVGHTLGIKSDG-TLWG 643
Query: 339 WGRGRSGVLGTGKTIDFFAP 358
WG R G LG G ++ + P
Sbjct: 644 WGTNRQGQLGDGTLVNKYVP 663
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 87/208 (41%), Gaps = 36/208 (17%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+ WG N+NGQLG G R P I D W V GS +T L +
Sbjct: 141 WGWGYNSNGQLGDGTTMDRRTPVKIGI---DINWVA--VATGSSYTLAL--------KAD 187
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSW 275
W++G + GQLG GTT P Q+ + + + F + + + + G +W+W
Sbjct: 188 GTLWSWGKNQRGQLGDGTTIDRHSPVQIGTEQTWTGIAAC----FSSGIGIKANGTLWTW 243
Query: 276 GMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G G LG+ N + +P+ + + Q+ + G+ H V + DG
Sbjct: 244 GFNNGGELGIGNND--------EKHTPVQVGAD-------QNWLYAVAGSNHIVALKVDG 288
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
LW WG +G +G G T+ +P V
Sbjct: 289 -SLWGWGLNEAGEIGNGNTVQQDSPVRV 315
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 45/93 (48%), Gaps = 14/93 (15%)
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
+G++W WG N L D +P+ I + + V VA G+++T+
Sbjct: 137 SGELWGWGYNS------NGQLGDGTTMDRRTPVKIGID-------INWVAVATGSSYTLA 183
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ DG LWSWG+ + G LG G TID +P +
Sbjct: 184 LKADG-TLWSWGKNQRGQLGDGTTIDRHSPVQI 215
Score = 42.0 bits (97), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 48/190 (25%), Positives = 80/190 (42%), Gaps = 33/190 (17%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
S+K G +L I + G LW WG G +LV+ + P + + +A G
Sbjct: 624 SIKTGVGHTLGIKSDGTLWGWGTN---RQGQLGDGTLVNKYVPVQL--GTDRDWINIAGG 678
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H + L S G ++WG NN GQ+G G+ ++ R +++ + + VY
Sbjct: 679 TIHNICLKSNG--------TLWAWGRNNYGQVGTGNLITQDR--MVQISAEQNWIDVYAS 728
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYVYL 253
SF + W GL +GQLG GT+ ++A+V +
Sbjct: 729 LDQSFAI-----------RADGSLWACGLNSSGQLGDGTSVDRAAMVAVGTNQ-----KW 772
Query: 254 VSVDCGLFHT 263
+S+ G +HT
Sbjct: 773 ISLAAGNYHT 782
>gi|307193259|gb|EFN76150.1| Probable E3 ubiquitin-protein ligase HERC4 [Harpegnathos saltator]
Length = 1054
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 75/304 (24%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSP--VWDFHG 126
P+ G +L ++ G L+ WG S+ EG G VS+ P V
Sbjct: 83 PLAFRKAACGSSHTLVVNEWGQLFSWG------SNVEGQLGLDRVSATIREPRMVKTLGT 136
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFN 185
+V++ACG +H +AL + GE Y+WG+N++GQLGLG D + L+PK++ +
Sbjct: 137 KIIVQIACGLKHSIALTNNGE--------LYAWGSNSDGQLGLGSDTKMELKPKLVHSL- 187
Query: 186 QDSPWAVYEVTCGSFHTALLT----------------------HRKRPNDM--------- 214
+ + V CG +HT +++ +R P +
Sbjct: 188 --AAVPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRTLRNSRVC 245
Query: 215 -------------LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
++ +T G G GQLGHG S ++P Q+ EL + + CG
Sbjct: 246 YAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGST-VTQISCGRR 304
Query: 262 HT-SVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISP---ILISGNGPHGPKF 313
HT ++V S G V++WG+ + G + N++ + G +SP +I+ + PK
Sbjct: 305 HTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFGPWVSPSGSSMINHDSHDSPKP 364
Query: 314 QDPV 317
D V
Sbjct: 365 TDCV 368
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 84/346 (24%), Positives = 139/346 (40%), Gaps = 74/346 (21%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG---FSLVSSFTPSPV 121
+ N + +I + G ++A+ G ++ GN E G L+S P
Sbjct: 27 EVNFEKANEIEQIACGDNYTIAVTKEGQVYSCGNNDHGQLGQEKGRKRLQLISGIDPL-- 84
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKI 180
K ACGS H + + G+ +SWG+N GQLGL + +R P++
Sbjct: 85 ------AFRKAACGSSHTLVVNEWGQ--------LFSWGSNVEGQLGLDRVSATIREPRM 130
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSAL 239
++T + ++ CG H+ LT+ + +G +GQLG G+ T+ L
Sbjct: 131 VKTLGTK---IIVQIACGLKHSIALTNNGE--------LYAWGSNSDGQLGLGSDTKMEL 179
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCP------------ 285
P+ V L V + V CG +HT V+S +G V++WG LGL
Sbjct: 180 KPKLVHSLAA-VPIAFVACGGYHTIVISKSGAVFAWGRNTFGQLGLSDIQNRNVPCQLRT 238
Query: 286 --NASLTRNEAGDAISPIL------------ISGNGPHGPKFQDPV-------------Q 318
N+ + G+ S L + G HG K + + Q
Sbjct: 239 LRNSRVCYAACGEEFSVFLTMDGGVFTCGAGMYGQLGHGNKTSEILPRQIMELMGSTVTQ 298
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
++CG HT+ + ++++WG G +G LG + P +V P
Sbjct: 299 ISCGRRHTLALVPSRGRVYAWGLGGAGQLGNRIAQNSTTPQVVFGP 344
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/244 (27%), Positives = 111/244 (45%), Gaps = 38/244 (15%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
GG + FTP V + + ++ACG + +A+ G+ YS G N++GQ
Sbjct: 15 GGIEDENIFTPREVNFEKANEIEQIACGDNYTIAVTKEGQV--------YSCGNNDHGQ- 65
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
LG + R R ++I + P A + CGS HT ++ N+ + W G
Sbjct: 66 -LGQEKGRKRLQLISGID---PLAFRKAACGSSHTLVV------NEWGQLFSW--GSNVE 113
Query: 228 GQLGHGTTQSALV-PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLC 284
GQLG + + P VK L + +V + CGL H+ +++ G++++WG LGL
Sbjct: 114 GQLGLDRVSATIREPRMVKTLGTKI-IVQIACGLKHSIALTNNGELYAWGSNSDGQLGLG 172
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ + + P L+ F VACG HT++++ G +++WGR
Sbjct: 173 SDTKM-------ELKPKLVHSLAAVPIAF-----VACGGYHTIVISKSG-AVFAWGRNTF 219
Query: 345 GVLG 348
G LG
Sbjct: 220 GQLG 223
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 31/198 (15%)
Query: 157 YSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ WG+ +G+LGLG + E+ P+ + N + + ++ CG +T +T
Sbjct: 2 FCWGSTIHGELGLGGIEDENIFTPREV---NFEKANEIEQIACGDNYTIAVTK------- 51
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
E ++ G ++GQLG + L Q+ + CG HT VV+ G ++S
Sbjct: 52 -EGQVYSCGNNDHGQLGQEKGRKRL---QLISGIDPLAFRKAACGSSHTLVVNEWGQLFS 107
Query: 275 WG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG +E LGL ++ R P ++ G + VQ+ACG H++ +T++
Sbjct: 108 WGSNVEGQLGLDRVSATIR-------EPRMVKTLGT-----KIIVQIACGLKHSIALTNN 155
Query: 333 GYKLWSWGRGRSGVLGTG 350
G +L++WG G LG G
Sbjct: 156 G-ELYAWGSNSDGQLGLG 172
>gi|414587148|tpg|DAA37719.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 188
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TVV V+ G+ H VAL++ +++C SWG +GQLG GD E RL P ++ F
Sbjct: 13 QTVVLVSAGASHSVALLTG-------NVLC-SWGRGEDGQLGHGDAEDRLVPTVLSGF-- 62
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D+P A+ V CG+ HT + D L+ W G G+ G+LGHG + P+ VK
Sbjct: 63 DAP-AITSVICGADHTTAYSE-----DELQVYSW--GWGDFGRLGHGNSSDVFTPQPVKA 114
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRN 292
L Q + + + CG H V+ AG+V SWG + GLG ++ L +
Sbjct: 115 L-QGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK 163
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/177 (24%), Positives = 75/177 (42%), Gaps = 21/177 (11%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + V AG S+A+ L WG + G P+ + F +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNVLCSWGRG---EDGQLGHGDAEDRLVPTVLSGFDAPAIT 68
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H A Y ++L YSWG + G+LG G+ P+ ++
Sbjct: 69 SVICGADHTTA-------YSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQG---L 118
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ ++ CG H +T + ++G +NGQLG GTT+ +L+P++++
Sbjct: 119 KIKQIACGDSHCLAVT--------MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQAF 167
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 189 PWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P V V+ G+ H+ ALLT +C ++G GE+GQLGHG + LVP +
Sbjct: 12 PQTVVLVSAGASHSVALLTGN--------VLC-SWGRGEDGQLGHGDAEDRLVPTVLSGF 62
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ SV CG HT+ S V+SWG L + D +P +
Sbjct: 63 DAPA-ITSVICGADHTTAYSEDELQVYSWGWGD------FGRLGHGNSSDVFTPQPV--K 113
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K + Q+ACG +H + VT G ++ SWGR ++G LG G T D P
Sbjct: 114 ALQGLKIK---QIACGDSHCLAVTMAG-EVQSWGRNQNGQLGLGTTEDSLLP 161
>gi|363733282|ref|XP_420476.3| PREDICTED: E3 ISG15--protein ligase HERC5 [Gallus gallus]
Length = 560
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 68/209 (32%), Positives = 94/209 (44%), Gaps = 25/209 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + G S+A+ G+L+ WG L+S P V G + ++A
Sbjct: 85 IVQIACGDHHSMALSRGGSLFTWGQNTHGQLGVGSQDLLISK--PQLVKGLKGIPLAQIA 142
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H V + +G YSWG N+ GQLGLG E R P +E W
Sbjct: 143 AGGAHSVVVSLSG--------AVYSWGKNDFGQLGLGHTEDRDCPSYVEALEH---WKAV 191
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVY 252
++CG HTA+L+ + +TFG G GQLGH +T++ P V EL V
Sbjct: 192 FISCGEDHTAVLSK--------NGLVFTFGAGGAGQLGHNSTRNEFRPRMVAELWGARVS 243
Query: 253 LVSVDCGLFHTSV-VSSAGDVWSWGMEKG 280
LV+ CG HT V V S V+S+G +G
Sbjct: 244 LVA--CGRQHTLVYVPSLDKVYSFGSYEG 270
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 79/342 (23%), Positives = 151/342 (44%), Gaps = 56/342 (16%)
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPK 179
V + + +V++ACG H +AL G + +WG N +GQLG+G ++ + +P+
Sbjct: 77 VKELENNDIVQIACGDHHSMALSRGGSLF--------TWGQNTHGQLGVGSQDLLISKPQ 128
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+++ + P A ++ G H+ +++ L +++G + GQLG G T+
Sbjct: 129 LVKGL-KGIPLA--QIAAGGAHSVVVS--------LSGAVYSWGKNDFGQLGLGHTEDRD 177
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
P V+ L + V + CG HT+V+S G V+++G L N+ TRNE
Sbjct: 178 CPSYVEALEHW-KAVFISCGEDHTAVLSKNGLVFTFGAGGAGQLGHNS--TRNE----FR 230
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
P +++ G + VACG HT++ K++S+G G LG+ + + P
Sbjct: 231 PRMVAE--LWGARVS---LVACGRQHTLVYVPSLDKVYSFG-SYEGQLGSERKANQLIPL 284
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKD--------------------LEGAEERDEKL 399
+ P ++ Q+ + ++ + ++ LE E
Sbjct: 285 PINSPVDNGKYCQENTSQNVIETTAEGRENIVDLLFKKRNSYPVNGIATLERKEVNAWVS 344
Query: 400 SSAMEEMKLLQSKLSVMERYASILHGSIF---GKPFAAEQDI 438
+S E K+++ + ++ + ++GS GK F Q+I
Sbjct: 345 NSCSEHWKIIKKNIGLIFSSEACINGSFLDKRGKHFKTSQEI 386
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+ S+LR + E N D + ++ CG H+ L+ R + +T+G +GQLG
Sbjct: 70 KTSKLRL-VKELENND----IVQIACGDHHSMALS---RGGSL-----FTWGQNTHGQLG 116
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G+ + Q+ + + + L + G H+ VVS +G V+SWG + G L
Sbjct: 117 VGSQDLLISKPQLVKGLKGIPLAQIAAGGAHSVVVSLSGAVYSWG-KNDFG---QLGLGH 172
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
E D S + + V ++CG HT +++ +G ++++G G +G LG
Sbjct: 173 TEDRDCPSYV-------EALEHWKAVFISCGEDHTAVLSKNGL-VFTFGAGGAGQLGHNS 224
Query: 352 TIDFFAPAIV--LW 363
T + F P +V LW
Sbjct: 225 TRNEFRPRMVAELW 238
Score = 45.8 bits (107), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 26/172 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + + AGG S+ + +GA++ WG D G PS V V
Sbjct: 136 IPLAQIAAGGAHSVVVSLSGAVYSWGK---NDFGQLGLGHTEDRDCPSYVEALEHWKAVF 192
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CG +H L G + +++GA GQLG + RP+++ W
Sbjct: 193 ISCGEDHTAVLSKNG--------LVFTFGAGGAGQLGHNSTRNEFRPRMVAEL-----WG 239
Query: 192 --VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
V V CG HT + P+ L+ + ++FG E GQLG + L+P
Sbjct: 240 ARVSLVACGRQHTLVYV----PS--LDKV-YSFGSYE-GQLGSERKANQLIP 283
>gi|426236339|ref|XP_004012127.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Ovis aries]
Length = 531
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G L P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/340 (26%), Positives = 135/340 (39%), Gaps = 53/340 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKNNLLSPAHI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S L T FA
Sbjct: 280 MVEKERVIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVTLPHLTHFSSTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 340 AVTWRLLSAE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 47.8 bits (112), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP+++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLDALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L ++PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGLAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|224053260|ref|XP_002297742.1| predicted protein [Populus trichocarpa]
gi|222845000|gb|EEE82547.1| predicted protein [Populus trichocarpa]
Length = 1063
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 80/297 (26%), Positives = 130/297 (43%), Gaps = 44/297 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-------DFHGHTV 129
V G +S A+ +G L++WG F L+ + + W G V
Sbjct: 328 VACGEYLSCAVTLSGDLYIWGGNAY-------NFGLLGCGSEATQWVPRKLSGPLEGIHV 380
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V+CG H + SAG+ +++G G LG GDR S P+ +E+
Sbjct: 381 SSVSCGPWHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRSSVSTPREVESLKG--- 429
Query: 190 WAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V CG +HTA ++ ++ +T+G G+ G+LGHG ++ LVP V
Sbjct: 430 LRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVA 489
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L + + V CG T ++++G V++ G P N D P + G
Sbjct: 490 TLVEPSF-CQVACGHSLTVALTTSGQVYTMG-------SPVYGQLGNPQADGKVPTRVEG 541
Query: 306 NGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V+ +ACGA H ++T ++++WG+G +G LG G T D P+IV
Sbjct: 542 K-----LMKNFVEELACGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRNFPSIV 592
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 25/212 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + SV G + + +AG L+ +G+ G S TP V G ++
Sbjct: 378 IHVSSVSCGPWHTAVVTSAGQLFTFGDGTF---GVLGHGDRSSVSTPREVESLKGLRTMR 434
Query: 132 VACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRPKIIETF 184
VACG H A+V E G ++WG + G+LG GD+E+RL P + T
Sbjct: 435 VACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKEARLVPTYVATL 491
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ S +V CG T LT +T G GQLG+ VP +V
Sbjct: 492 VEPS---FCQVACGHSLTVALT--------TSGQVYTMGSPVYGQLGNPQADGK-VPTRV 539
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ ++ + CG +H +V++S +V++WG
Sbjct: 540 EGKLMKNFVEELACGAYHVAVLTSRTEVYTWG 571
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 107/262 (40%), Gaps = 43/262 (16%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ SF P + V +ACG +H + GE + SWG G+LG G
Sbjct: 257 MDSFVPKALESAVLLDVQAIACGRQHAALVTKQGEVF--------SWGEELGGRLGHGVD 308
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML--ESMCWTFGLGENGQL 230
PK ++ + V V CG + + +T D+ + FGL L
Sbjct: 309 SDVSHPKFVDGLKN---FNVELVACGEYLSCAVT---LSGDLYIWGGNAYNFGL-----L 357
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G G+ + VP ++ + +++ SV CG +HT+VV+SAG ++++G + G+ L
Sbjct: 358 GCGSEATQWVPRKLSGPLEGIHVSSVSCGPWHTAVVTSAGQLFTFG-DGTFGV-----LG 411
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSW 339
+ +P + K ++VACG HT V + KL++W
Sbjct: 412 HGDRSSVSTPREV-----ESLKGLRTMRVACGVWHTAAVVEVMVGSSSSSNCSSGKLFTW 466
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G G LG G P V
Sbjct: 467 GDGDKGRLGHGDKEARLVPTYV 488
>gi|224495959|ref|NP_001139096.1| probable E3 ubiquitin-protein ligase HERC3 [Danio rerio]
Length = 1046
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/239 (29%), Positives = 107/239 (44%), Gaps = 33/239 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL--VSSFTPSPVWDFHGHTVV 130
+I V G +A+ G L++WG +SS + G S+ +P P+ G +
Sbjct: 138 RISQVMCGNHHCIALSKDGQLFVWGE----NSSGQLGLGKGEPSTLSPQPLKSLCGIPLT 193
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++ G +H AL +G + WG N+ GQLGL D + R P I+
Sbjct: 194 QISAGGDHSFALSFSG--------AVFGWGKNSAGQLGLNDEQDRAVPCHIKFLRSQK-- 243
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++CG HTA LT E +TFG G GQLGH +T++ +P +V EL
Sbjct: 244 -VVYISCGEEHTAALTK--------EGGLFTFGNGSKGQLGHDSTRNEPLPRRVMEL-MG 293
Query: 251 VYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + CG HT + V S G ++++G L G A SP+ +S P
Sbjct: 294 TEVSQIACGRNHTLAFVPSTGLIYAFGCNT------QGQLGTGIRGSAKSPVPVSNIQP 346
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 40/282 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 131
KI V G SLA++ G ++ WG D G G + + P + H + +
Sbjct: 85 KISGVSCGQAHSLAVNEQGQVFAWGA---GDGGQLGLGTAEEAVRVPRLIKKLCEHRISQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLRPKIIETFNQDSPW 190
V CG+ H +AL G+ + WG N++GQLGLG E S L P+ +++
Sbjct: 142 VMCGNHHCIALSKDGQLF--------VWGENSSGQLGLGKGEPSTLSPQPLKSL---CGI 190
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELP 248
+ +++ G H+ L+ FG G+N GQLG Q VP +K L
Sbjct: 191 PLTQISAGGDHSFALSFSGA----------VFGWGKNSAGQLGLNDEQDRAVPCHIKFL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G ++++G L ++ TRNE P+
Sbjct: 240 RSQKVVYISCGEEHTAALTKEGGLFTFGNGSKGQLGHDS--TRNE------PLPRRVMEL 291
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
G + Q+ACG HT+ ++++G G LGTG
Sbjct: 292 MGTEVS---QIACGRNHTLAFVPSTGLIYAFGCNTQGQLGTG 330
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 120/301 (39%), Gaps = 74/301 (24%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY-------------KG---- 151
G S S F P F G + +VACG++H + L+ G Y KG
Sbjct: 16 GASEASVFEPRSCCVFDGRGLKEVACGNQHSLFLLHDGSVYTCGSNSCGQLGHDKGGSRP 75
Query: 152 -------------------------EDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFN 185
E ++WGA + GQLGLG E +R P++I+
Sbjct: 76 ELVGALDAQKISGVSCGQAHSLAVNEQGQVFAWGAGDGGQLGLGTAEEAVRVPRLIKKLC 135
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQV 244
+ + +V CG+ H L+ + + +G +GQLG G + S L P+ +
Sbjct: 136 EHR---ISQVMCGNHHCIALSK--------DGQLFVWGENSSGQLGLGKGEPSTLSPQPL 184
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
K L + L + G H+ +S +G V+ WG L N+ D P I
Sbjct: 185 KSLCG-IPLTQISAGGDHSFALSFSGAVFGWGKNSA------GQLGLNDEQDRAVPCHI- 236
Query: 305 GNGPHGPKF---QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
KF Q V ++CG HT +T +G L+++G G G LG T + P V
Sbjct: 237 -------KFLRSQKVVYISCGEEHTAALTKEG-GLFTFGNGSKGQLGHDSTRNEPLPRRV 288
Query: 362 L 362
+
Sbjct: 289 M 289
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 85/195 (43%), Gaps = 28/195 (14%)
Query: 159 WGANNNGQLGLGDRE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
WG++ GQLG+G E S P+ F+ + EV CG+ H+ L H +
Sbjct: 5 WGSSGAGQLGIGASEASVFEPRSCCVFDGR---GLKEVACGNQHSLFLLH--------DG 53
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+T G GQLGH S PE V L + V CG H+ V+ G V++WG
Sbjct: 54 SVYTCGSNSCGQLGHDKGGSR--PELVGALDAQ-KISGVSCGQAHSLAVNEQGQVFAWGA 110
Query: 278 EKGLGLCPNASLTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
G L A +A+ P LI H QV CG H + ++ DG +L
Sbjct: 111 GDG------GQLGLGTAEEAVRVPRLIKKLCEHRIS-----QVMCGNHHCIALSKDG-QL 158
Query: 337 WSWGRGRSGVLGTGK 351
+ WG SG LG GK
Sbjct: 159 FVWGENSSGQLGLGK 173
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 74/178 (41%), Gaps = 25/178 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + + AGG S A+ +GA++ WG +S+ + G + P + VV
Sbjct: 190 IPLTQISAGGDHSFALSFSGAVFGWGK----NSAGQLGLNDEQDRAVPCHIKFLRSQKVV 245
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-GDRESRLRPKIIETFNQDSP 189
++CG EH AL G +++G + GQLG R L +++E +
Sbjct: 246 YISCGEEHTAALTKEGG--------LFTFGNGSKGQLGHDSTRNEPLPRRVMELMGTE-- 295
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++ CG HT P+ + + FG GQLG G SA P V +
Sbjct: 296 --VSQIACGRNHTLAFV----PST---GLIYAFGCNTQGQLGTGIRGSAKSPVPVSNI 344
>gi|224011731|ref|XP_002295640.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583671|gb|ACI64357.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 277
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 24/206 (11%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG +GQLG+GD + P ++ + VTCGS+HTA + D+
Sbjct: 2 FSWGRGEDGQLGIGDTSDQDEPTYVDALR--GVGIITHVTCGSYHTAAVA---SNGDL-- 54
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G G G+LGHG P +V+ L + +V + CG HT+VV+S G +++WG
Sbjct: 55 ---YTWGGGMYGKLGHGNESGHSTPRRVEALVG-LSIVDIACGSRHTAVVTSKGCLYTWG 110
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
+K G+ + + G +P L+ NG + VQ++ HT +TDD ++
Sbjct: 111 -DKENGVAGHG----DTEGHQYTPKLLERLNG------KKVVQLSACGFHTACLTDD-HE 158
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G+ G LG G + +P ++
Sbjct: 159 TFAWGEGKFGRLGNGTERNCHSPRLI 184
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 31/233 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ V CGS H A+ S G+ Y +WG G+LG G+ P+ +E
Sbjct: 35 ITHVTCGSYHTAAVASNGDLY--------TWGGGMYGKLGHGNESGHSTPRRVEAL---V 83
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
++ ++ CGS HTA++T + +T+G ENG GHG T+ ++ E
Sbjct: 84 GLSIVDIACGSRHTAVVTSK--------GCLYTWGDKENGVAGHGDTEGHQYTPKLLERL 135
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+V + FHT+ ++ + ++WG K G N + RN + LI
Sbjct: 136 NGKKVVQLSACGFHTACLTDDHETFAWGEGK-FGRLGNGT-ERNCHSPRLIESLIG---- 189
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ P QVACG H+ ++T DG K++++G G G LG ++ P +V
Sbjct: 190 -----KYPCQVACGGFHSAVITRDG-KMYTFGGGEHGQLGHADKVNKLKPTLV 236
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 119/266 (44%), Gaps = 45/266 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I V G + A+ + G L+ WG E G S TP V G ++V
Sbjct: 35 ITHVTCGSYHTAAVASNGDLYTWGGGMYGKLGHGNESGHS-----TPRRVEALVGLSIVD 89
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPW 190
+ACGS H + S G Y+WG NG G GD E + PK++E N
Sbjct: 90 IACGSRHTAVVTSKG--------CLYTWGDKENGVAGHGDTEGHQYTPKLLERLNGKK-- 139
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +++ FHTA LT D E+ W G G+ G+LG+GT ++ P ++ L
Sbjct: 140 -VVQLSACGFHTACLT------DDHETFAW--GEGKFGRLGNGTERNCHSPRLIESLIGK 190
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
Y V CG FH++V++ G ++++G + + L + + + P L+
Sbjct: 191 -YPCQVACGGFHSAVITRDGKMYTFGGGE------HGQLGHADKVNKLKPTLV------- 236
Query: 311 PKFQDPV---QVACGAAHTVLVTDDG 333
+ D V Q+ CG +H+V +T +G
Sbjct: 237 -EALDGVVVKQITCGWSHSVALTSEG 261
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 91/203 (44%), Gaps = 28/203 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
+ I + G + + + G L+ WG N TEG +TP + +G
Sbjct: 85 LSIVDIACGSRHTAVVTSKGCLYTWGDKENGVAGHGDTEG-----HQYTPKLLERLNGKK 139
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+++ H L ET+ +WG G+LG G + P++IE+
Sbjct: 140 VVQLSACGFHTACLTDDHETF--------AWGEGKFGRLGNGTERNCHSPRLIESLIGKY 191
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P +V CG FH+A++T R M +TFG GE+GQLGH + L P V+ L
Sbjct: 192 PC---QVACGGFHSAVIT---RDGKM-----YTFGGGEHGQLGHADKVNKLKPTLVEALD 240
Query: 249 QYVYLVSVDCGLFHTSVVSSAGD 271
V + + CG H+ ++S G+
Sbjct: 241 G-VVVKQITCGWSHSVALTSEGE 262
>gi|26353276|dbj|BAC40268.1| unnamed protein product [Mus musculus]
Length = 531
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ P + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 61 STLVPKKLEALCGKKIKSLSYGSGPHVLLTT-------EDGVVYAWGHNGYSQLGNGTTN 113
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P ++ V EV CGS H+ L + + +G GQ+G G
Sbjct: 114 QGIAP--VQVCTNLLIKQVIEVACGSHHSMALA--------ADGELFAWGYNNCGQVGSG 163
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P ++ +V++ CG + V +G+V+ WG N L
Sbjct: 164 STANQPTPRKITNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNG------NGQLGLGN 217
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
G+ ++P+ ++ HG Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 218 NGNQLTPVRVA--ALHGMCVN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGSKN 271
Query: 354 DFFAPAIVL 362
+ +P ++
Sbjct: 272 NLLSPTQIM 280
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 66/224 (29%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
AP+++C+ V G S+A+ G L+ WG NC G S + TP
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
+ + H VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKITNCLHTKRVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G+ +
Sbjct: 224 PVRVAALH---GMCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGSKNN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMWGQCRG 315
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 116/281 (41%), Gaps = 41/281 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLTTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL + GE + +WG NN GQ+G G ++ P+ I N
Sbjct: 130 VIEVACGSHHSMALAADGELF--------AWGYNNCGQVGSGSTANQPTPRKIT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 TKRVVNIACGQ------TSSMAVLDSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGSKNNLLSPTQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
K + AC + HT G ++ WG RG+S +L
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + ++VACG+ H++ + DG +L++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVIEVACGSHHSMALAADG-ELFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAP 358
WG G +G+G T + P
Sbjct: 152 WGYNNCGQVGSGSTANQPTP 171
>gi|118397447|ref|XP_001031056.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila]
gi|89285378|gb|EAR83393.1| RCC1-like domain protein 3, HECT domain [Tetrahymena thermophila
SB210]
Length = 1146
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 115/247 (46%), Gaps = 46/247 (18%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
++ F P+ F G V++VACG H +AL + YSWG + ++G
Sbjct: 620 INKFQMIPI--FKGIKVLQVACGDYHTLALTDTDQV--------YSWGGTLHKKVG---- 665
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG----ENG 228
+ +P I+ N+ V +V CG +H+A +T +T+G G G
Sbjct: 666 QRSGKPAPIQQLNKK---GVIQVDCGDYHSAAITQN--------GDIYTWGGGGQDYNKG 714
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG G + PE++K + +V V CG FHT ++S +++ WG G
Sbjct: 715 QLGLGHVKDIENPEKLK-FFEGKKIVKVSCGQFHTMALTSENELFGWGA----GEFGELG 769
Query: 289 LTRNEAGDAISPILISGNGPH------GPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGR 341
+++E +PI + N F++ +Q + CG HT+L+T++GY ++S G
Sbjct: 770 TSKHE----YTPIRVKVNFNQYNILYENILFENSIQNIKCGGHHTLLLTNNGY-IYSSGY 824
Query: 342 GRSGVLG 348
GR G LG
Sbjct: 825 GRQGQLG 831
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 126/296 (42%), Gaps = 59/296 (19%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK+ V G +LA+ + ++ WG G P+P+ + V++
Sbjct: 632 IKVLQVACGDYHTLALTDTDQVYSWGGTLHKKVGQRSG-------KPAPIQQLNKKGVIQ 684
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGAN----NNGQLGLGDRESRLRPKIIETFNQD 187
V CG H A+ G+ Y+WG N GQLGLG + P+ ++ F
Sbjct: 685 VDCGDYHSAAITQNGD--------IYTWGGGGQDYNKGQLGLGHVKDIENPEKLKFF--- 733
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK-E 246
+ +V+CG FHT LT E+ + +G GE G+L GT++ P +VK
Sbjct: 734 EGKKIVKVSCGQFHTMALTS--------ENELFGWGAGEFGEL--GTSKHEYTPIRVKVN 783
Query: 247 LPQYVYLV----------SVDCGLFHTSVVSSAGDVWS--WGMEKGLGLCPNASLTRNEA 294
QY L ++ CG HT ++++ G ++S +G + LGL RN
Sbjct: 784 FNQYNILYENILFENSIQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGL-------RNSE 836
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
++ + + +++A G H++ ++D +++ G G G LG G
Sbjct: 837 NQCEFQLVWTLTK------KKIIKIAAGWNHSLALSDQN-DIFACGHGARGQLGLG 885
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 44/230 (19%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ +++ H + + GE Y VC G+ +G+LGL L I F
Sbjct: 580 IKQISTSQNHSACISANGELY-----VC---GSALHGKLGL----EELTMANINKFQMIP 627
Query: 189 PWA---VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ V +V CG +HT LT D + W G L Q + P ++
Sbjct: 628 IFKGIKVLQVACGDYHTLALT------DTDQVYSW------GGTLHKKVGQRSGKPAPIQ 675
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN-ASLTRNEAGDAISPILIS 304
+L + ++ VDCG +H++ ++ GD+++WG G G N L D
Sbjct: 676 QLNKKG-VIQVDCGDYHSAAITQNGDIYTWG---GGGQDYNKGQLGLGHVKDI------- 724
Query: 305 GNGPHGPKF---QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P KF + V+V+CG HT+ +T + +L+ WG G G LGT K
Sbjct: 725 -ENPEKLKFFEGKKIVKVSCGQFHTMALTSEN-ELFGWGAGEFGELGTSK 772
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 46/107 (42%), Gaps = 21/107 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALW-----MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I ++K GG +L + N G ++ G L +S + F LV W
Sbjct: 800 IQNIKCGGHHTLLLTNNGYIYSSGYGRQGQLGLRNSENQCEFQLV--------WTLTKKK 851
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
++K+A G H +AL + ++ G GQLGLGD ESR
Sbjct: 852 IIKIAAGWNHSLALSDQND--------IFACGHGARGQLGLGDEESR 890
>gi|414587149|tpg|DAA37720.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 168
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 89/170 (52%), Gaps = 23/170 (13%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TVV V+ G+ H VAL++ +++C SWG +GQLG GD E RL P ++ F
Sbjct: 13 QTVVLVSAGASHSVALLTG-------NVLC-SWGRGEDGQLGHGDAEDRLVPTVLSGF-- 62
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D+P A+ V CG+ HT + D L+ W G G+ G+LGHG + P+ VK
Sbjct: 63 DAP-AITSVICGADHTTAYS-----EDELQVYSW--GWGDFGRLGHGNSSDVFTPQPVKA 114
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRN 292
L Q + + + CG H V+ AG+V SWG + GLG ++ L +
Sbjct: 115 L-QGLKIKQIACGDSHCLAVTMAGEVQSWGRNQNGQLGLGTTEDSLLPQK 163
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P + V AG S+A+ L WG + G P+ + F +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNVLCSWGRG---EDGQLGHGDAEDRLVPTVLSGFDAPAIT 68
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H A Y ++L YSWG + G+LG G+ P+ ++
Sbjct: 69 SVICGADHTTA-------YSEDELQVYSWGWGDFGRLGHGNSSDVFTPQPVKALQG---L 118
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ ++ CG H +T + ++G +NGQLG GTT+ +L+P++++
Sbjct: 119 KIKQIACGDSHCLAVT--------MAGEVQSWGRNQNGQLGLGTTEDSLLPQKIQ 165
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 37/69 (53%), Gaps = 8/69 (11%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
FTP PV G + ++ACG H +A+ AGE SWG N NGQLGLG E
Sbjct: 107 FTPQPVKALQGLKIKQIACGDSHCLAVTMAGEVQ--------SWGRNQNGQLGLGTTEDS 158
Query: 176 LRPKIIETF 184
L P+ I+ F
Sbjct: 159 LLPQKIQAF 167
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 80/172 (46%), Gaps = 24/172 (13%)
Query: 189 PWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P V V+ G+ H+ ALLT +C ++G GE+GQLGHG + LVP +
Sbjct: 12 PQTVVLVSAGASHSVALLTGNV--------LC-SWGRGEDGQLGHGDAEDRLVPTVLSGF 62
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ SV CG HT+ S V+SWG L + D +P +
Sbjct: 63 -DAPAITSVICGADHTTAYSEDELQVYSWGWGD------FGRLGHGNSSDVFTPQPV--K 113
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K + Q+ACG +H + VT G ++ SWGR ++G LG G T D P
Sbjct: 114 ALQGLKIK---QIACGDSHCLAVTMAG-EVQSWGRNQNGQLGLGTTEDSLLP 161
>gi|298714154|emb|CBJ33856.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 669
Score = 84.7 bits (208), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 125/298 (41%), Gaps = 51/298 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF------TPSPVWDFH 125
+ + V GG + + + G ++ WG GGF + +P +
Sbjct: 271 LSVQQVCCGGQHAAVLTDCGEIFTWGR---------GGFGRLGHGNREGLESPRRIEALE 321
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V+VACG + A+ ++GE Y+WGA NG+LGLGD R P +E +
Sbjct: 322 GIPCVQVACGFAYTAAVTASGE--------LYTWGAGENGRLGLGDVADRHTPSRVEGLH 373
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V EV GS H+ +LT E + FG E GHG + L P +
Sbjct: 374 SK----VKEVYAGSVHSCVLTR--------EGTVYAFGKHE--YTGHGDHEDVLDPRLIP 419
Query: 246 ELP----QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAI- 298
V +SV G +HT ++ G V++WG + LG+ + ++ RN G
Sbjct: 420 TFSGGSGALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFL 479
Query: 299 -SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
SP L+ + V+V G H+ +T DG +L+ GR G LG G F
Sbjct: 480 PSPQLVE-----SLVGMNIVKVVAGWGHSAALTVDG-QLYVCGRNYQGQLGLGSPQGF 531
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 102/240 (42%), Gaps = 30/240 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S +P V G +V +V CG +H L GE ++WG G+LG G+RE
Sbjct: 258 SDVSPVVVQGLLGLSVQQVCCGGQHAAVLTDCGEI--------FTWGRGGFGRLGHGNRE 309
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P+ IE + P +V CG +TA +T +T+G GENG+LG G
Sbjct: 310 GLESPRRIEAL-EGIP--CVQVACGFAYTAAVT--------ASGELYTWGAGENGRLGLG 358
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
P +V+ L V V G H+ V++ G V+++G + G +
Sbjct: 359 DVADRHTPSRVEGLHSKVK--EVYAGSVHSCVLTREGTVYAFGKHEYTG--------HGD 408
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
D + P LI + V G HT+ +T G ++++WG R LG G +
Sbjct: 409 HEDVLDPRLIPTFSGGSGALVRQISVGPGGYHTMALTCQG-QVYAWGHNRVAQLGIGNSF 467
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 84/205 (40%), Gaps = 31/205 (15%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS-----FTPSP--VW 122
A ++ SV GG ++A+ G ++ WG+ + F++ + F PSP V
Sbjct: 427 ALVRQISVGPGGYHTMALTCQGQVYAWGHNRVAQLGIGNSFTVPRNMEGAYFLPSPQLVE 486
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
G +VKV G H AL G+ Y VC G N GQLGLG + + +
Sbjct: 487 SLVGMNIVKVVAGWGHSAALTVDGQLY-----VC---GRNYQGQLGLGSPQGFPQNERGH 538
Query: 183 TFNQD-------SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
F D + ++ CG H+ + W+FG G+ GQLGH +T
Sbjct: 539 PFQADFCLIDRLQHLKIKQIACGGEHSVAVAENGE--------VWSFGAGQKGQLGHEST 590
Query: 236 QSALVPEQVKELPQYVY-LVSVDCG 259
P V+ L ++ V CG
Sbjct: 591 TREDFPRLVQALKSTRREIMHVACG 615
Score = 45.8 bits (107), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 12/106 (11%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V CG H +V++ G++++WG G G + + E+ I + +
Sbjct: 276 VCCGGQHAAVLTDCGEIFTWG-RGGFGRLGHGNREGLESPRRIEAL----------EGIP 324
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VQVACG A+T VT G +L++WG G +G LG G D P+ V
Sbjct: 325 CVQVACGFAYTAAVTASG-ELYTWGAGENGRLGLGDVADRHTPSRV 369
>gi|442319690|ref|YP_007359711.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487332|gb|AGC44027.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 747
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 126/312 (40%), Gaps = 59/312 (18%)
Query: 60 LEDDSKTNHKAPIKI-----CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
L D + T P ++ + AG SLA+ + GA+W WG+ G ++ S
Sbjct: 282 LGDGTTTQRSVPAQVGLTDVMAAVAGNYHSLAVRSDGAVWAWGDNRYRQ---LGNGNMTS 338
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
S P G T+V G +H + L + D +SWG N GQLG G +
Sbjct: 339 SLLPIQAGLSGGITLV---AGFKHSLTLRA--------DGTVWSWGDNVFGQLGDGTYQP 387
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R+ P + T +P V G H+ R W++G E+GQLG+G
Sbjct: 388 RMSPVRVATTTLGNP----GVASGQLHSVYRDSAGR--------VWSWGDNEDGQLGNGI 435
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
L P L VSV G HT V+ VW+WG+ +R E
Sbjct: 436 GADKLTPA----LTGLTGAVSVVAGNRHTVVLKGDTTVWAWGVN-----------SRGEV 480
Query: 295 GDAIS-----PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
GD + P+ + G ++ GA H++ + DG +W+WG R G LG
Sbjct: 481 GDGTNANTSQPVRVLG-------LSGITAISAGAYHSLALRTDG-TVWAWGFNRYGQLGN 532
Query: 350 GKTIDFFAPAIV 361
G T+D P V
Sbjct: 533 GGTVDQNQPVQV 544
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 121/308 (39%), Gaps = 49/308 (15%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+ D + N P++ I ++ AG SLA+ G +W WG G V
Sbjct: 480 VGDGTNANTSQPVRVLGLSGITAISAGAYHSLALRTDGTVWAWG---FNRYGQLGNGGTV 536
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V G V +A G H +AL D ++WG N +GQ+G G
Sbjct: 537 DQNQPVQVAGLSG--VTAIAAGHSHSLALCG--------DGTVWAWGYNFDGQIGSGTNN 586
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P ++ S V +T G +H+ L + W++G +GQLG+G
Sbjct: 587 WHILP--VQAVGLSS---VTAITAGGYHSLALRS--------DGTVWSWGYNGSGQLGNG 633
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
S P V L +VS+ G +H+ + S G V +WG G + SLT
Sbjct: 634 ALASLNAPGPVSNLTG---VVSIAAGDYHSLALRSDGTVRAWGFNFD-GQIGDGSLTNRH 689
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
P++++G V V G H++ + DG W+WG G LG G
Sbjct: 690 V-----PVMVAG-------MSGVVSVIAGDHHSMAMRSDG-TTWAWGANTEGQLGDGTRN 736
Query: 354 DFFAPAIV 361
D P V
Sbjct: 737 DSIIPVRV 744
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 120/287 (41%), Gaps = 44/287 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V AGG +LA+ G +W WG+ S G ++ + P V G VV ++
Sbjct: 202 VIAVAAGGNTTLALRADGTVWAWGDN---RSGQLGDGTVTTRGNPLQVLGLTG--VVTLS 256
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H VAL S G ++WG N GQLG G R P + + V
Sbjct: 257 AGASHCVALRSNG--------TAWTWGLNTMGQLGDGTTTQRSVPAQVGLTD------VM 302
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
G++H+ L R + W +G QLG+G S+L+P Q L + L
Sbjct: 303 AAVAGNYHS--LAVRS------DGAVWAWGDNRYRQLGNGNMTSSLLPIQAG-LSGGITL 353
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V G H+ + + G VWSWG + G + + +SP+ ++ P
Sbjct: 354 V---AGFKHSLTLRADGTVWSWG-DNVFGQLGDGTYQPR-----MSPVRVATTTLGNPG- 403
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
VA G H+V D ++WSWG G LG G D PA+
Sbjct: 404 -----VASGQLHSVY-RDSAGRVWSWGDNEDGQLGNGIGADKLTPAL 444
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 78/300 (26%), Positives = 120/300 (40%), Gaps = 43/300 (14%)
Query: 62 DDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV 121
D ++ + + G S+ + + G++W WG + + G L ++ +P+PV
Sbjct: 40 DQTRAALAGRASVARLSLGQYHSVGVHSDGSVWAWGF----NRQGQLGNGLFTN-SPTPV 94
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
+ V VA G H +AL S D ++WG N +GQLG G P +
Sbjct: 95 KVKNLTDAVAVASGDSHSLALRS--------DGTVWAWGDNYSGQLGTGSTAVSAEPVQV 146
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+ + V V G H+A L + W +G QLG T S+ VP
Sbjct: 147 QGLS-----GVLSVASGFAHSAALRS--------DGTVWAWGDNRYRQLGPLTAGSSSVP 193
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
QV P +++V G T + + G VW+WG + L TR P+
Sbjct: 194 VQV---PGLGGVIAVAAGGNTTLALRADGTVWAWGDNRSGQLGDGTVTTRGN------PL 244
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G V ++ GA+H V + +G W+WG G LG G T PA V
Sbjct: 245 QVLG-------LTGVVTLSAGASHCVALRSNGTA-WTWGLNTMGQLGDGTTTQRSVPAQV 296
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 83/190 (43%), Gaps = 34/190 (17%)
Query: 64 SKTN--HKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
S TN H P++ + ++ AGG SLA+ + G +W WG S G +L S
Sbjct: 582 SGTNNWHILPVQAVGLSSVTAITAGGYHSLALRSDGTVWSWG---YNGSGQLGNGALASL 638
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P PV + G VV +A G H +AL S D +WG N +GQ+G G +R
Sbjct: 639 NAPGPVSNLTG--VVSIAAGDYHSLALRS--------DGTVRAWGFNFDGQIGDGSLTNR 688
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P ++ + V V G H+ + + W +G GQLG GT
Sbjct: 689 HVPVMVAGMS-----GVVSVIAGDHHSMAMRS--------DGTTWAWGANTEGQLGDGTR 735
Query: 236 QSALVPEQVK 245
+++P +V+
Sbjct: 736 NDSIIPVRVE 745
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/287 (24%), Positives = 113/287 (39%), Gaps = 43/287 (14%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
SV AG ++ + +W WG +S E G ++ T PV + ++
Sbjct: 451 VSVVAGNRHTVVLKGDTTVWAWG----VNSRGEVGDG-TNANTSQPVRVLGLSGITAISA 505
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G+ H +AL + D ++WG N GQLG G + +P + + V
Sbjct: 506 GAYHSLALRT--------DGTVWAWGFNRYGQLGNGGTVDQNQPVQVAGLS-----GVTA 552
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
+ G H+ L + W +G +GQ+G GT ++P Q L +
Sbjct: 553 IAAGHSHSLALCG--------DGTVWAWGYNFDGQIGSGTNNWHILPVQAVGLSS---VT 601
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
++ G +H+ + S G VWSWG G G N +L A +S
Sbjct: 602 AITAGGYHSLALRSDGTVWSWGYN-GSGQLGNGALASLNAPGPVS------------NLT 648
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V +A G H++ + DG + +WG G +G G + P +V
Sbjct: 649 GVVSIAAGDYHSLALRSDG-TVRAWGFNFDGQIGDGSLTNRHVPVMV 694
>gi|348528302|ref|XP_003451657.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Oreochromis
niloticus]
Length = 531
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 125/291 (42%), Gaps = 34/291 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
K C + ++ I N ++++G NC S+ G +S+ P + G VV
Sbjct: 23 KACVFGSSANEAIYITNDDEVFVFGLNC----SNCLGTGDSLSTIVPKKLDFLSGRKVVS 78
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ GS + L + ED ++WG N QLG G + P ++ +
Sbjct: 79 LSYGSGPHILLAT-------EDGELFAWGHNGYSQLGNGTTNQGVAPVLVSANLLNKK-- 129
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V EV CGS H+ LT D E W G GQ+G G+T + P +V Q
Sbjct: 130 VTEVACGSHHSMALT------DTGEVYAW--GYNNCGQVGSGSTANQPTPRRVSSCLQNK 181
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
VS+ CG + V G+V+ WG N L G+ ++P + G G
Sbjct: 182 VAVSIVCGQTSSLAVVDNGEVYGWGYNG------NGQLGLGNNGNQVTPCRLV--GLQGL 233
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q Q+ G AH++ +TD+G L++WG G LGTG + +P +L
Sbjct: 234 CVQ---QIVSGYAHSMALTDEGL-LYAWGANTYGQLGTGNKSNQLSPVQIL 280
Score = 45.1 bits (105), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 14/128 (10%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
S+ G SLA+ + G ++ WG + G + + TP + G V ++ G
Sbjct: 185 SIVCGQTSSLAVVDNGEVYGWG---YNGNGQLGLGNNGNQVTPCRLVGLQGLCVQQIVSG 241
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H +AL G + Y+WGAN GQLG G++ ++L P I T + V
Sbjct: 242 YAHSMALTDEG--------LLYAWGANTYGQLGTGNKSNQLSPVQILT---EKERIVEIA 290
Query: 196 TCGSFHTA 203
C S HT+
Sbjct: 291 ACHSTHTS 298
>gi|403222935|dbj|BAM41066.1| chromosome condensation protein [Theileria orientalis strain
Shintoku]
Length = 2619
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 82/334 (24%), Positives = 142/334 (42%), Gaps = 45/334 (13%)
Query: 47 VIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSST 106
V+ Q +++G SL P K G +++ N ++ WG P +
Sbjct: 972 VVPQLISLGLNHSLCISRTKVTNPPSSSRRTKDGAKHTVSHLN---VYSWGKVPF--NCL 1026
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
G + +S P + F G + +VACG H LVS+ + + V +++G N+G+
Sbjct: 1027 GQGVDVSTSEYPKIIPFFSGRKIAQVACGDYHSAVLVSSSKQHPNAGTV-FTFGLGNSGR 1085
Query: 167 LGLG-DRESRLRPKIIETFNQDSP-W----------------AVYEVTCGSFHTALLTHR 208
LG D S + + I T ++D P W A+ + CG+ HT + T
Sbjct: 1086 LGYHIDTNSDVLSQQIGTEDKDEPSWCTHTPQPVGLSIGLRNAIVSIACGANHTLVTT-- 1143
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
++ +++G+G G LG G+ + P +V +++ G H+ +
Sbjct: 1144 ------VDGCVYSWGMGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDK 1197
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G+VWSWG N L + +P LI + + Q++CG +H+
Sbjct: 1198 EGNVWSWGYGG------NGRLGLGSTRNYYTPNLIRIFDTY-----EVFQISCGDSHSAC 1246
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTI-DFFAPAIV 361
+ G +++WG R G LG GK + D PA+V
Sbjct: 1247 LDRFG-TVYTWGCCRGGKLGLGKIVSDVLEPAVV 1279
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 116/294 (39%), Gaps = 44/294 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I S+ G +L G ++ WG + G S+ + + P V + +
Sbjct: 1129 IVSIACGANHTLVTTVDGCVYSWG---MGAYGVLGTGSVANRYNPVKVVFPSDNIFISKC 1185
Query: 134 C-GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
C GS H +AL G + SWG NG+LGLG + P +I F+ + V
Sbjct: 1186 CAGSRHSMALDKEGNVW--------SWGYGGNGRLGLGSTRNYYTPNLIRIFDT---YEV 1234
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++++CG H+A L +T+G G+LG G S ++ V E + +
Sbjct: 1235 FQISCGDSHSACLDRF--------GTVYTWGCCRGGKLGLGKIVSDVLEPAVVESLKGTH 1286
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGL-----GLCPNASLTRNEAGDAISPILISGNG 307
++ + CG +T +S++G ++ WG G GL N D + G
Sbjct: 1287 IIQIACGTGNTLALSASGKIYQWGCTLGFNKQSEGLISNIDYVPQPVPDTGFKNVFIAAG 1346
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P+ +C A + L +WG G LG G + D AP V
Sbjct: 1347 PY----------SCAAINIF------GDLLTWGLGTGYRLGHGDSKDHVAPKFV 1384
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/387 (21%), Positives = 147/387 (37%), Gaps = 119/387 (30%)
Query: 54 IGAPDSLEDDSKTNHKAPIK---------ICSVKAGGMMSLAIDNAGALWMWG---NCPL 101
+GA L S N P+K I AG S+A+D G +W WG N L
Sbjct: 1153 MGAYGVLGTGSVANRYNPVKVVFPSDNIFISKCCAGSRHSMALDKEGNVWSWGYGGNGRL 1212
Query: 102 PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
ST + +TP+ + F + V +++CG H L G Y+WG
Sbjct: 1213 GLGSTR------NYYTPNLIRIFDTYEVFQISCGDSHSACLDRFG--------TVYTWGC 1258
Query: 162 NNNGQLGLGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLT-------------H 207
G+LGLG S L P ++E+ + ++ CG+ +T L+
Sbjct: 1259 CRGGKLGLGKIVSDVLEPAVVESLKGTH---IIQIACGTGNTLALSASGKIYQWGCTLGF 1315
Query: 208 RKRPNDMLESMCW--------------------------------TFGLGENGQLGHGTT 235
K+ ++ ++ + T+GLG +LGHG +
Sbjct: 1316 NKQSEGLISNIDYVPQPVPDTGFKNVFIAAGPYSCAAINIFGDLLTWGLGTGYRLGHGDS 1375
Query: 236 QSALVPEQVKELPQYVYLVS-------------------------------VDCGLFHTS 264
+ + P+ V L +Y+ + + G H
Sbjct: 1376 KDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQDNVKAGATNAHDEKRIQQIAVGDGHGV 1435
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGA 323
+++ G V++WG+ G G + T+++ P+L + F + ++ACG+
Sbjct: 1436 LLTCNGTVYTWGVNNGTGY----NSTKDQIESYSEPMLFN-------HFSSKISKIACGS 1484
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
H++ +T +G L++WG +G LG G
Sbjct: 1485 NHSLAITVNGL-LFTWGCNDNGQLGQG 1510
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 92/230 (40%), Gaps = 69/230 (30%)
Query: 146 GETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
G + L YSWG LG G D + PKII F S + +V CG +H+A+
Sbjct: 1005 GAKHTVSHLNVYSWGKVPFNCLGQGVDVSTSEYPKIIPFF---SGRKIAQVACGDYHSAV 1061
Query: 205 L--THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
L + ++ PN +TFGLG +G+LG Y + + +
Sbjct: 1062 LVSSSKQHPN---AGTVFTFGLGNSGRLG--------------------YHIDTNSDVLS 1098
Query: 263 TSVVSSAGDVWSW--------GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
+ + D SW G+ GL RN
Sbjct: 1099 QQIGTEDKDEPSWCTHTPQPVGLSIGL---------RNAI-------------------- 1129
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
V +ACGA HT++ T DG ++SWG G GVLGTG + + P V++P
Sbjct: 1130 --VSIACGANHTLVTTVDGC-VYSWGMGAYGVLGTGSVANRYNPVKVVFP 1176
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 127/296 (42%), Gaps = 41/296 (13%)
Query: 56 APDSLEDDSK---TNHKAPIKICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFS 111
P L+D+ K TN +I + G + + G ++ WG N +ST+
Sbjct: 1403 TPMELQDNVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGTGYNSTKDQ-- 1460
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+ S++ +++ + K+ACGS H +A+ G + ++WG N+NGQLG GD
Sbjct: 1461 -IESYSEPMLFNHFSSKISKIACGSNHSLAITVNG--------LLFTWGCNDNGQLGQGD 1511
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES--MCWTFGLGENGQ 229
SR+ P + V G ++ + + M + W FG G+
Sbjct: 1512 LRSRVIPDHVPYIEN-----CINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGK 1566
Query: 230 LGHGT--TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
LG G T + + P ++ + VY +++ G H+ V++ G ++S G G
Sbjct: 1567 LGLGEALTSTVMTPREITTVTG-VYKLAL--GTMHSVVLTHEGSLYSAGAGTG------- 1616
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
R GD S + KF D V G++H++ ++ D +L+ WG G+
Sbjct: 1617 --GRLGTGDT-SNYFVFTPVKTEVKFVD---VCAGSSHSLAISVDN-ELYGWGEGK 1665
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 52/255 (20%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANN-NGQLGLGDR-ESRLRPKIIETFNQ 186
+ ++A G H V L G Y+WG NN G D+ ES P + F+
Sbjct: 1424 IQQIAVGDGHGVLLTCNG--------TVYTWGVNNGTGYNSTKDQIESYSEPMLFNHFSS 1475
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ ++ CGS H+ +T + + +T+G +NGQLG G +S ++P+ V
Sbjct: 1476 ----KISKIACGSNHSLAIT--------VNGLLFTWGCNDNGQLGQGDLRSRVIPDHV-- 1521
Query: 247 LPQYVYLVSVDCGLFHTSVVSSA----------GDVWSWGMEKGLGLCPNASLTRNEAGD 296
P ++V G+ ++ + S+ G +W +G C L
Sbjct: 1522 -PYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSS----CGKLGLGEALTST 1576
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
++P I+ ++A G H+V++T +G L+S G G G LGTG T ++F
Sbjct: 1577 VMTPREIT-------TVTGVYKLALGTMHSVVLTHEG-SLYSAGAGTGGRLGTGDTSNYF 1628
Query: 357 APAIVLWPPLTEEFK 371
++ P+ E K
Sbjct: 1629 -----VFTPVKTEVK 1638
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 78/359 (21%), Positives = 127/359 (35%), Gaps = 77/359 (21%)
Query: 29 CCMDGQLGFSG--SNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLA 86
CC G+LG S+ L P V+E K H I + G +LA
Sbjct: 1258 CCRGGKLGLGKIVSDVLEPAVVESL-------------KGTH-----IIQIACGTGNTLA 1299
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
+ +G ++ WG C L + G + P PV D G V +A G A+ G
Sbjct: 1300 LSASGKIYQWG-CTLGFNKQSEGLISNIDYVPQPVPD-TGFKNVFIAAGPYSCAAINIFG 1357
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ----DSPWAVYEVTCGSFHT 202
DL+ +WG +LG GD + + PK + D+ VY+ T
Sbjct: 1358 ------DLL--TWGLGTGYRLGHGDSKDHVAPKFVSHLRTRIYIDTLLKVYDETPMELQD 1409
Query: 203 ALLTHRKRPND---------------MLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +D +L + G N G+ +T+ + E E
Sbjct: 1410 NVKAGATNAHDEKRIQQIAVGDGHGVLLTCNGTVYTWGVNNGTGYNSTKDQI--ESYSEP 1467
Query: 248 PQYVYLVS----VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
+ + S + CG H+ ++ G +++WG N L + + + P
Sbjct: 1468 MLFNHFSSKISKIACGSNHSLAITVNGLLFTWGCND------NGQLGQGDLRSRVIP--- 1518
Query: 304 SGNGPHGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
H P ++ + V C + H + DD LW +G G LG G+ +
Sbjct: 1519 ----DHVPYIENCINVFAGVDNSGCICSSNHEDFMKDDYGTLWVFGSSSCGKLGLGEAL 1573
>gi|91204161|emb|CAJ71814.1| conserved hypothetical protein [Candidatus Kuenenia
stuttgartiensis]
Length = 411
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/285 (27%), Positives = 120/285 (42%), Gaps = 49/285 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ S+ AG +LA+ + G +W WGN L D + E + TP V V
Sbjct: 88 VVSIAAGWEHNLAVKSDGTVWAWGNNRFGQLGDGTNE------NRNTPVKVKTI--KDVT 139
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ G H +AL S G + WG N QLG G + +P ++ N
Sbjct: 140 EIDAGFYHSIALQSDG--------TVWVWGNNELDQLGDGTKSDAYKPMQVQGLNN---- 187
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V+ G+ H +L + W +G GQLG GT + +P V +
Sbjct: 188 -VVAVSGGNHHNLVLK--------ADGTIWGWGANGYGQLGDGTMTESSIPTPVYDFNGA 238
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V++ S G + V + G +W WGM G N + T ++ PI I+G
Sbjct: 239 VFIAS---GNNYNVAVKADGSIWGWGMNT-YGQLGNGTQTNSKI-----PIRING----- 284
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ V +A G H +++ DG L S G R+G LGTG T ++
Sbjct: 285 --LNNSVSIATGGYHALILQQDGTVL-SMGYNRTGQLGTGATSNY 326
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 128/301 (42%), Gaps = 56/301 (18%)
Query: 60 LEDDSKTNHKAPIKICSVK------AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + N P+K+ ++K AG S+A+ + G +W+WGN L D +G S
Sbjct: 118 LGDGTNENRNTPVKVKTIKDVTEIDAGFYHSIALQSDGTVWVWGNNEL-DQLGDGTKS-- 174
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
++ P V + VV V+ G+ H + L + G + WGAN GQLG G
Sbjct: 175 DAYKPMQVQGLN--NVVAVSGGNHHNLVLKADG--------TIWGWGANGYGQLGDGTMT 224
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P + FN AV+ + +++ A+ + W +G+ GQLG+G
Sbjct: 225 ESSIPTPVYDFNG----AVFIASGNNYNVAV---------KADGSIWGWGMNTYGQLGNG 271
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
T ++ +P ++ L V S+ G +H ++ G V S G + G G N
Sbjct: 272 TQTNSKIPIRINGLNNSV---SIATGGYHALILQQDGTVLSMGYNRTGQLGTGATSNYQY 328
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
T + HG D V +A G H++ + DG +W+WG G LG
Sbjct: 329 TTLKV--------------HG--LSDVVSIAAGYYHSLALKKDG-TIWAWGNNEYGQLGD 371
Query: 350 G 350
G
Sbjct: 372 G 372
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 116/289 (40%), Gaps = 51/289 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTE-GGFSLVSSFTPSPVWDFHGHTV 129
+ + GG SL + G +W WG L D +T F++ V
Sbjct: 38 VPQISGGGSHSLVLKPDGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLED---------V 88
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V +A G EH +A+ S G ++WG N GQLG G E+R P ++T
Sbjct: 89 VSIAAGWEHNLAVKSDG--------TVWAWGNNRFGQLGDGTNENRNTPVKVKTIKD--- 137
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V E+ G +H+ L + W +G E QLG GT A P QV+ L
Sbjct: 138 --VTEIDAGFYHSIALQS--------DGTVWVWGNNELDQLGDGTKSDAYKPMQVQGLNN 187
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+V+V G H V+ + G +W WG G G + ++T + +P+
Sbjct: 188 ---VVAVSGGNHHNLVLKADGTIWGWG-ANGYGQLGDGTMTESS---IPTPVY------- 233
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
F V +A G + V V DG +W WG G LG G + P
Sbjct: 234 --DFNGAVFIASGNNYNVAVKADG-SIWGWGMNTYGQLGNGTQTNSKIP 279
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 94/226 (41%), Gaps = 36/226 (15%)
Query: 58 DSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
D L D +K++ P+++ +V G +L + G +W WG G +
Sbjct: 166 DQLGDGTKSDAYKPMQVQGLNNVVAVSGGNHHNLVLKADGTIWGWG---ANGYGQLGDGT 222
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+ S P+PV+DF+G V +A G+ + VA+ + G + WG N GQLG G
Sbjct: 223 MTESSIPTPVYDFNG--AVFIASGNNYNVAVKADGS--------IWGWGMNTYGQLGNGT 272
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+ + P I N + G +H +L + + G GQLG
Sbjct: 273 QTNSKIPIRINGLNNS-----VSIATGGYHALILQQ--------DGTVLSMGYNRTGQLG 319
Query: 232 HGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
G T + +V L +VS+ G +H+ + G +W+WG
Sbjct: 320 TGATSNYQYTTLKVHGLSD---VVSIAAGYYHSLALKKDGTIWAWG 362
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 84/212 (39%), Gaps = 36/212 (16%)
Query: 153 DLVCYSWGANNNGQLGLGDRESR---LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
D ++WG N+ GQLG G R ++ K +E V + G H +
Sbjct: 54 DGTVWAWGGNHAGQLGDGTTNPRKFAIQVKGLED--------VVSIAAGWEHNLAVKS-- 103
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+ W +G GQLG GT ++ P +VK + + +D G +H+ + S
Sbjct: 104 ------DGTVWAWGNNRFGQLGDGTNENRNTPVKVKTIKD---VTEIDAGFYHSIALQSD 154
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G VW WG + L DA P+ + G + V V+ G H +++
Sbjct: 155 GTVWVWGNNE------LDQLGDGTKSDAYKPMQVQG-------LNNVVAVSGGNHHNLVL 201
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG +W WG G LG G + P V
Sbjct: 202 KADG-TIWGWGANGYGQLGDGTMTESSIPTPV 232
>gi|315645418|ref|ZP_07898542.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
gi|315278896|gb|EFU42206.1| hypothetical protein PVOR_07930 [Paenibacillus vortex V453]
Length = 667
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 122/291 (41%), Gaps = 48/291 (16%)
Query: 74 ICSVKAG-GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
I ++ G G S+A+ G +W WG D+ G + V +P V V +
Sbjct: 136 IKAISGGLGYHSMALTENGTVWTWGKN---DNGELGNGTTVQQNSPVLVIGLS--DVTAI 190
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G + +AL S G ++WGAN NG+LG G + P + + V
Sbjct: 191 AAGGYYSLALKSDG--------TIWAWGANGNGELGDGTIVDKHTPVQVSGLSD-----V 237
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+T G H+ + + W +G+ G LG GT + +P +V+ L +
Sbjct: 238 IAITAGGSHSLAIKQ--------DGTVWAWGINMYGTLGDGTRTNRTIPVKVRNLQ---H 286
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ ++ G H+ + G+VW WG +G LGL N+S T E I +L
Sbjct: 287 IKAIAGGGHHSLALDQEGNVWGWGDNSRGQLGLGHNSSRTTPEQLTGIEHVL-------- 338
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+A G H+ + DG ++W WG SG +G G D APA+
Sbjct: 339 -------DIAGGGFHSAALKKDG-RVWGWGLNSSGQIGDGTRNDRNAPALT 381
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/232 (28%), Positives = 98/232 (42%), Gaps = 39/232 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
K+ G H +LVS+G+ Y WG + GQ+G +R P N
Sbjct: 38 KLVAGYYHTASLVSSGD--------VYVWGQGDRGQIGDAAWNARNTPVQARGLND---- 85
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V ++ G T L + WT+G ENGQLG GTT VP V L
Sbjct: 86 -VMDIHTGVRSTMALRS--------DGTVWTWGSNENGQLGIGTTADKNVPTPVSGLSG- 135
Query: 251 VYLVSVDCGL-FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ ++ GL +H+ ++ G VW+WG L ++ +N SP+L+ G
Sbjct: 136 --IKAISGGLGYHSMALTENGTVWTWGKNDNGELGNGTTVQQN------SPVLVIG---- 183
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D +A G +++ + DG +W+WG +G LG G +D P V
Sbjct: 184 ---LSDVTAIAAGGYYSLALKSDG-TIWAWGANGNGELGDGTIVDKHTPVQV 231
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 111/285 (38%), Gaps = 42/285 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G ++A+ + G +W WG+ ++ G + P+PV G +
Sbjct: 86 VMDIHTGVRSTMALRSDGTVWTWGSN---ENGQLGIGTTADKNVPTPVSGLSGIKAISGG 142
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL E+ ++WG N+NG+LG G + P ++ + V
Sbjct: 143 LG-YHSMALT--------ENGTVWTWGKNDNGELGNGTTVQQNSPVLVIGLSD-----VT 188
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G +++ L + W +G NG+LG GT P QV L +
Sbjct: 189 AIAAGGYYSLALKS--------DGTIWAWGANGNGELGDGTIVDKHTPVQVSGLSD---V 237
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+++ G H+ + G VW+WG+ G + + T P+ +
Sbjct: 238 IAITAGGSHSLAIKQDGTVWAWGINM-YGTLGDGTRTNRTI-----PVKVR-------NL 284
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q +A G H++ + +G +W WG G LG G P
Sbjct: 285 QHIKAIAGGGHHSLALDQEG-NVWGWGDNSRGQLGLGHNSSRTTP 328
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 85/216 (39%), Gaps = 43/216 (19%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + P+++ ++ AGG SLAI G +W WG + T G +
Sbjct: 217 LGDGTIVDKHTPVQVSGLSDVIAITAGGSHSLAIKQDGTVWAWG---INMYGTLGDGTRT 273
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ P V + + +A G H +AL G + WG N+ GQLGLG
Sbjct: 274 NRTIPVKVRNLQ--HIKAIAGGGHHSLALDQEGN--------VWGWGDNSRGQLGLGHNS 323
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
SR P+ + V ++ G FH+A L R W +GL +GQ+G G
Sbjct: 324 SRTTPEQLTGIEH-----VLDIAGGGFHSAALKKDGR--------VWGWGLNSSGQIGDG 370
Query: 234 TTQSALVPEQVKELPQYV-----------YLVSVDC 258
T P K + YL++VD
Sbjct: 371 TRNDRNAPALTKAVLDTTAPDTGRGMLSPYLITVDS 406
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 73/170 (42%), Gaps = 26/170 (15%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ G +HTA L + +G G+ GQ+G + P Q + L +
Sbjct: 38 KLVAGYYHTASLVS--------SGDVYVWGQGDRGQIGDAAWNARNTPVQARGLND---V 86
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ + G+ T + S G VW+WG + N L D P +SG
Sbjct: 87 MDIHTGVRSTMALRSDGTVWTWGSNE------NGQLGIGTTADKNVPTPVSG-------L 133
Query: 314 QDPVQVACGAA-HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
++ G H++ +T++G +W+WG+ +G LG G T+ +P +V+
Sbjct: 134 SGIKAISGGLGYHSMALTENG-TVWTWGKNDNGELGNGTTVQQNSPVLVI 182
>gi|403303318|ref|XP_003942281.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Saimiri
boliviensis boliviensis]
Length = 531
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGVAP--IQVCTNLLIKKVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V + +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHFKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLNPAHIM 280
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 90/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLI-----KK 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 FKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + ++P I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN------TYGQLGTGNKNNLLNPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHLSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPENADLKF 374
>gi|260832812|ref|XP_002611351.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
gi|229296722|gb|EEN67361.1| hypothetical protein BRAFLDRAFT_73256 [Branchiostoma floridae]
Length = 1152
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/216 (31%), Positives = 101/216 (46%), Gaps = 30/216 (13%)
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWAVYEV 195
+H +AL S GE Y SWG + G+LG GD SR P ++ + + V +
Sbjct: 249 KHYMALTSEGEVY--------SWGNGDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHI 300
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLV 254
CGS ++A +T + +T+G G G+LGHG+++ L P V L + V +
Sbjct: 301 VCGSTYSAAIT--------ADGELFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRRVIDI 352
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
G T V+ G VWSWG L R + +P +I + Q
Sbjct: 353 CCGSGDAQTLAVTDDGTVWSWGDGD------YGKLGRGGSDGCKTPKIID-----RLQGQ 401
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
D V+V CGA ++ +T G+ +W+WG+G S LG G
Sbjct: 402 DIVRVCCGAQFSLALTKTGH-IWTWGKGDSQRLGHG 436
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 115/272 (42%), Gaps = 37/272 (13%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT----VVKVACGS 136
G +A+ + G ++ WGN D G S P+ V G VV + CGS
Sbjct: 248 GKHYMALTSEGEVYSWGN---GDGGRLGHGDTNSREEPTLVRGLSGKQLGRHVVHIVCGS 304
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
+ A+ + GE ++WG N G+LG G E +L P ++ + V ++
Sbjct: 305 TYSAAITADGE--------LFTWGRGNYGRLGHGSSEDQLTPTLVVSLKGRR---VIDIC 353
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
CGS L + W++G G+ G+LG G + P+ + L Q +V V
Sbjct: 354 CGSGDAQTLAVTD------DGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRL-QGQDIVRV 406
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
CG + ++ G +W+WG KG G + G + +
Sbjct: 407 CCGAQFSLALTKTGHIWTWG--KG---------DSQRLGHGTEEHIRFPKQLEGLRGKKV 455
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
V VA G+ H +++T++G +++ WGR G LG
Sbjct: 456 VDVAVGSMHCLVMTEEG-EVYGWGRNDQGQLG 486
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 37/268 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ + G S AI G L+ WG + G S TP+ V G V+ +
Sbjct: 297 VVHIVCGSTYSAAITADGELFTWGR---GNYGRLGHGSSEDQLTPTLVVSLKGRRVIDIC 353
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN-QDSPWAV 192
CGS L +D +SWG + G+LG G + PKII+ QD +
Sbjct: 354 CGSGDAQTLAVT------DDGTVWSWGDGDYGKLGRGGSDGCKTPKIIDRLQGQD----I 403
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG+ + LT WT+G G++ +LGHGT + P+Q++ L +
Sbjct: 404 VRVCCGAQFSLALTK--------TGHIWTWGKGDSQRLGHGTEEHIRFPKQLEGL-RGKK 454
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V G H V++ G+V+ WG L ++ T+++ P L+ +G
Sbjct: 455 VVDVAVGSMHCLVMTEEGEVYGWGRNDQGQLGDSSFSTKSD------PTLMPLDG----- 503
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+ +ACG A + T G+ WS G
Sbjct: 504 -KSISGIACGPAQSFCWTSTGH--WSVG 528
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 107/240 (44%), Gaps = 42/240 (17%)
Query: 129 VVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V+KVA E H +AL S GE Y SWG + G+LG GD + + +
Sbjct: 191 VLKVAAHPEGKHYMALTSEGEVY--------SWGNGDGGRLGHGDTNVCYKGQKVLVI-- 240
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
VY H LT E +++G G+ G+LGHG T S P V+
Sbjct: 241 -----VYPYHPEGKHYMALTS--------EGEVYSWGNGDGGRLGHGDTNSREEPTLVRG 287
Query: 247 LPQYV---YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
L ++V + CG +++ +++ G++++WG L + D ++P L+
Sbjct: 288 LSGKQLGRHVVHIVCGSTYSAAITADGELFTWGRGN------YGRLGHGSSEDQLTPTLV 341
Query: 304 SGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + + + CG+ A T+ VTDDG +WSWG G G LG G + P I+
Sbjct: 342 VS-----LKGRRVIDICCGSGDAQTLAVTDDG-TVWSWGDGDYGKLGRGGSDGCKTPKII 395
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 103/235 (43%), Gaps = 42/235 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+++AC ++AL G Y +C+ + + + G P+++E+
Sbjct: 149 VLQLACAERCLIALTKTGRVY-----MCF-YSSESQG------------PQLMESLADKE 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V G + AL + E +++G G+ G+LGHG T ++V
Sbjct: 191 VLKVAAHPEGKHYMALTS---------EGEVYSWGNGDGGRLGHGDTNVCYKGQKV---- 237
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + H ++S G+V+SWG G L + +R E P L+ G
Sbjct: 238 -LVIVYPYHPEGKHYMALTSEGEVYSWGNGDGGRLGHGDTNSREE------PTLV--RGL 288
Query: 309 HGPKF-QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + V + CG+ ++ +T DG +L++WGRG G LG G + D P +V+
Sbjct: 289 SGKQLGRHVVHIVCGSTYSAAITADG-ELFTWGRGNYGRLGHGSSEDQLTPTLVV 342
>gi|440801355|gb|ELR22375.1| regulator of chromosome condensation, RCC1, putative [Acanthamoeba
castellanii str. Neff]
Length = 395
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/310 (27%), Positives = 134/310 (43%), Gaps = 54/310 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHT- 128
++ +V AGG SL + G ++ +GN L + E + F P + F
Sbjct: 38 RVVAVSAGGHHSLVLTEEGRVFSFGNGLHGRLGHGNEE------TCFEPRRIAFFDTTAG 91
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF---- 184
V K++ G+ H +AL G+ YS+G G+LG GD +L P+ I
Sbjct: 92 VAKISAGTTHSLALTKDGK--------AYSFGFGMFGRLGHGDETDQLLPREITLRGHGA 143
Query: 185 ----------NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
N+ P + V G FH+ LLT R ++FG G G LGHG
Sbjct: 144 SPPVGDRVEENETDP-VIEHVAAGYFHSLLLTTDGR--------VYSFGAGVMGALGHGD 194
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
L P ++ L +VS+ CG +T V+ G V+ +G++ + +
Sbjct: 195 RDKRLRPTMIEALADR-RIVSMACGSANTLVLDDEGRVFFFGLDY-------SEFPKFTE 246
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
G A +L S G ++ +V G H +L+T +G KL ++G G++G LG G +
Sbjct: 247 GQARFVLLPSALG----LAEEITEVRAGEGHCLLLTREG-KLLAFGLGKNGRLGLGDETN 301
Query: 355 FFAPAIVLWP 364
AP V +P
Sbjct: 302 RLAPTAVTFP 311
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 104/234 (44%), Gaps = 44/234 (18%)
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+P+ H VV V+ G H + L G +S+G +G+LG G+ E+ P
Sbjct: 29 TPIRALEAHRVVAVSAGGHHSLVLTEEGR--------VFSFGNGLHGRLGHGNEETCFEP 80
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ I F D+ V +++ G+ H+ LT + ++FG G G+LGHG
Sbjct: 81 RRIAFF--DTTAGVAKISAGTTHSLALTK--------DGKAYSFGFGMFGRLGHGDETDQ 130
Query: 239 LVP---------------EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
L+P ++V+E + V G FH+ ++++ G V+S+G G+
Sbjct: 131 LLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGYFHSLLLTTDGRVYSFGA----GV 186
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
+L + + P +I + V +ACG+A+T+++ D+G +
Sbjct: 187 M--GALGHGDRDKRLRPTMIEALAD-----RRIVSMACGSANTLVLDDEGRVFF 233
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 97/218 (44%), Gaps = 28/218 (12%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
V S G +G LG GD ++L ++ V V+ G H+ +LT R
Sbjct: 4 VVLSAGGGQHGSLGQGDAVTQL--SVLTPIRALEAHRVVAVSAGGHHSLVLTEEGR---- 57
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
++FG G +G+LGHG ++ P ++ + + G H+ ++ G +S
Sbjct: 58 ----VFSFGNGLHGRLGHGNEETCFEPRRIAFFDTTAGVAKISAGTTHSLALTKDGKAYS 113
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISP--ILISGNG---PHGPKFQ----DPV--QVACGA 323
+ G G+ L + D + P I + G+G P G + + DPV VA G
Sbjct: 114 F----GFGMF--GRLGHGDETDQLLPREITLRGHGASPPVGDRVEENETDPVIEHVAAGY 167
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H++L+T DG +++S+G G G LG G P ++
Sbjct: 168 FHSLLLTTDG-RVYSFGAGVMGALGHGDRDKRLRPTMI 204
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 84/202 (41%), Gaps = 26/202 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+I S+ G +L +D+ G ++ +G P TEG V PS + +
Sbjct: 211 RIVSMACGSANTLVLDDEGRVFFFGLDYSEFP-KFTEGQARFV--LLPSALG--LAEEIT 265
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V G H + L G+ ++G NG+LGLGD +RL P + TF +
Sbjct: 266 EVRAGEGHCLLLTREGK--------LLAFGLGKNGRLGLGDETNRLAPTAV-TFPSNGTT 316
Query: 191 AV-YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE--- 246
+V ++ CG+ H L L + FG G+ GQL +G Q P
Sbjct: 317 SVEIDIACGAKHGLALVDVPGEGPRL----YAFGSGDQGQLANGHRQDRASPTATTTSLP 372
Query: 247 --LPQYVYLVSVDCGLFHTSVV 266
L Q++ ++ G H+ V+
Sbjct: 373 ALLHQHIVPAAISAGKAHSLVL 394
>gi|119574650|gb|EAW54265.1| hect domain and RLD 4, isoform CRA_e [Homo sapiens]
Length = 947
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+I V G SLA+ A ++ WG G +P + G ++
Sbjct: 27 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQ 84
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H L +G + WG N GQLGL D R P ++++ S
Sbjct: 85 VAAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKI 134
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
VY + CG HTA LT E +TFG G GQLGH +T + P +V EL +
Sbjct: 135 VY-ICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 185
Query: 252 YLVSVDCGLFHTSV-VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + CG HTS V S+G ++S+ GL N L + SP + GN
Sbjct: 186 -VTEIACGRQHTSAFVPSSGRIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 234
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 40/238 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQD 187
+V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 29 IVQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LG 79
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 80 IPFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 129
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 130 -RSQKIVYICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKV---- 178
Query: 308 PHGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 179 -----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 231
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +V V CG +H+ +S A +V+ WG K L + + + +L G
Sbjct: 27 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-------G 79
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F +QVA G AH+ ++T G ++ WGR + G LG D + P ++
Sbjct: 80 IPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 126
>gi|242091255|ref|XP_002441460.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
gi|241946745|gb|EES19890.1| hypothetical protein SORBIDRAFT_09g027250 [Sorghum bicolor]
Length = 1020
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 131/294 (44%), Gaps = 40/294 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
+ G + A+ +G L+ WG+ + G + S + P V G V+ V+CG
Sbjct: 312 IACGEFHTCAVTASGDLYTWGD-GYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCG 370
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
S H S+G+ + ++G G LG G RE+ PK +E S + +V
Sbjct: 371 SWHSALTTSSGKVF--------TFGDGTFGALGHGKRETVGYPKEVEAL---SGFRTMKV 419
Query: 196 TCGSFHTALLTHRKR--PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +H+A + +++ +T+G G+ QLGHG S LVP V+ L Y +
Sbjct: 420 ACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLIDYSFH 479
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG T +S++G V++ +G N L N D PI +
Sbjct: 480 -QVACGHSMTIALSTSGHVFT------MGSSSNGQLG-NPKSDGKQPIPV---------- 521
Query: 314 QDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CG+ H ++T ++++WG G +G LG G D P +V
Sbjct: 522 QDRLSGELVEEISCGSCHVAVLTSRS-EVYTWGMGANGRLGHGGVEDKKKPTLV 574
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 120/290 (41%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG EG + + S P P+ V ++ACG H+
Sbjct: 211 IESLGDVYVWGEVWTDVIPAEGSTNYLCSKADILIPKPLESDVVLDVQQIACGYRHIALT 270
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G RPK++E + V + CG FHT
Sbjct: 271 TRQGEVF--------AWGEELGGRLGHGTDADISRPKLVEALAVSN---VEYIACGEFHT 319
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T D+ W G G LG+G S +P++V + V ++SV CG +H
Sbjct: 320 CAVTA---SGDL---YTWGDGYYNVGLLGNGAGASHWLPKRVSGPLEGVQVLSVSCGSWH 373
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ +S+G V+++ G LG ++ + +A+S ++VA
Sbjct: 374 SALTTSSGKVFTFGDGTFGALGHGKRETVGYPKEVEALSGFRT-------------MKVA 420
Query: 321 CGAAHTVLVTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ + + KL++WG G LG G P V
Sbjct: 421 CGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCV 470
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 111/264 (42%), Gaps = 36/264 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHT 128
+++ SV G S ++G ++ +G+ T G T P V G
Sbjct: 362 VQVLSVSCGSWHSALTTSSGKVFTFGD------GTFGALGHGKRETVGYPKEVEALSGFR 415
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLV--CYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
+KVACG H A+V + + Y+WGA + QLG GD++SRL P +++
Sbjct: 416 TMKVACGLWHSAAIVESSNHVSINVISRKLYTWGAGDKNQLGHGDKDSRLVPTCVQSLID 475
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVK 245
++ ++V CG T L+ +T G NGQLG+ + +P Q +
Sbjct: 476 ---YSFHQVACGHSMTIALS--------TSGHVFTMGSSSNGQLGNPKSDGKQPIPVQDR 524
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ V +S CG H +V++S +V++WGM N L D P L+
Sbjct: 525 LSGELVEEIS--CGSCHVAVLTSRSEVYTWGMG------ANGRLGHGGVEDKKKPTLV-- 574
Query: 306 NGPHGPKFQDPVQVACGAAHTVLV 329
K + +ACG+ T +
Sbjct: 575 ---EALKDRHVKSIACGSNFTTCI 595
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 18/113 (15%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG H ++ + G+V++WG E G LG +A ++R + +A++
Sbjct: 260 IACGYRHIALTTRQGEVFAWGEELGGRLGHGTDADISRPKLVEALA-------------V 306
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
+ +ACG HT VT G L++WG G G+LG G + P V P
Sbjct: 307 SNVEYIACGEFHTCAVTASG-DLYTWGDGYYNVGLLGNGAGASHWLPKRVSGP 358
>gi|338530520|ref|YP_004663854.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
gi|337256616|gb|AEI62776.1| RCC1 repeat-containing protein [Myxococcus fulvus HW-1]
Length = 1457
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 130/349 (37%), Gaps = 71/349 (20%)
Query: 58 DSLEDDSKTNHKAP--IKICSVKAGGMMSLAIDNAGALWMWGN---------------CP 100
DS DD T + P + +V G +LA+ G LW WG P
Sbjct: 334 DSGTDDRATPGEVPGLRSVAAVVGGAQHALALRGDGTLWAWGGGLAGQLGHGGSERHVVP 393
Query: 101 LP-------DSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS---EHVVALVSAGETYK 150
P S G F +++ VW + +T ++ G+ H V +
Sbjct: 394 APLLRLADVASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHAAVRVEGLSGIR 453
Query: 151 G------------EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
G D ++WG N GQLG G R RP + +V V G
Sbjct: 454 GVAASGHHSLAVGADGTVWAWGRNAAGQLGDGSTRDRARPVAVSGLT-----SVVAVATG 508
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
HT L + W +G GQLG GTT L P +V L +V+V
Sbjct: 509 GSHTMALRG--------DGTVWAWGYNALGQLGDGTTVDRLTPVRVARLDS---VVAVAA 557
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
G + + + G VW+WG + + R + P+ ++G + +
Sbjct: 558 GTYFSMALRGDGTVWTWGEGFEGQVGDGGGVQR------LFPVQVAG-------LTNVTR 604
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
VA G+AH + V DG +W+WG G LG G D F P V P LT
Sbjct: 605 VAAGSAHALAVRGDG-TVWAWGDNGEGQLGDGTWSDRFRPVQV--PGLT 650
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 90/338 (26%), Positives = 132/338 (39%), Gaps = 83/338 (24%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSST-------------------E 107
+P I SV +G SLA+D AG +W WG + L D +T
Sbjct: 98 SPRDIVSVVSGEAHSLALDEAGTVWAWGGNSSGQLGDGTTTDRVTPMQVAGLTDVVAVAA 157
Query: 108 GGFSLVSSFTPSPVW----DFH-----GHT--------------VVKVACGSEHVVALVS 144
G F ++ VW +FH GHT VV +A G + +A++
Sbjct: 158 GDFHSLALRGDGTVWAWGTNFHGQLGRGHTEPGLTPEPVPGLEGVVALAAGFDFTLAVM- 216
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
+D +WGAN++GQLG G RL P + + + VT G++H
Sbjct: 217 -------DDGTVRAWGANSSGQLGDGTFTQRLAPVEVAHIS-----GISAVTAGTYHAVA 264
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
L + WT+G +GQLG G VP +V L + + S+D
Sbjct: 265 LGK--------DGGVWTWGANSSGQLGDGAWSDRAVPARVPGLERVKAVASMDASSL--- 313
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+ AG V +WG L + + R G+ P + V GA
Sbjct: 314 ALLEAGSVLAWGANGSGQLGDSGTDDRATPGEV-------------PGLRSVAAVVGGAQ 360
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
H + + DG LW+WG G +G LG G + PA +L
Sbjct: 361 HALALRGDG-TLWAWGGGLAGQLGHGGSERHVVPAPLL 397
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/320 (27%), Positives = 124/320 (38%), Gaps = 58/320 (18%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS----- 111
P + T P++I AG SL + GA+W WG S GG +
Sbjct: 37 PRAARTQRITVTAPPMRIA---AGSQHSLYVSPTGAVWAWGGN---TSGQLGGEATPLQR 90
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
L + PSP +V V G H +AL AG ++WG N++GQLG G
Sbjct: 91 LAPAPLPSP------RDIVSVVSGEAHSLALDEAG--------TVWAWGGNSSGQLGDGT 136
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R+ P + V V G FH+ L + W +G +GQLG
Sbjct: 137 TTDRVTPMQVAGLTD-----VVAVAAGDFHSLALRG--------DGTVWAWGTNFHGQLG 183
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G T+ L PE V P +V++ G T V G V +WG G + + T+
Sbjct: 184 RGHTEPGLTPEPV---PGLEGVVALAAGFDFTLAVMDDGTVRAWGANSS-GQLGDGTFTQ 239
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
++P+ ++ V G H V + DG +W+WG SG LG G
Sbjct: 240 R-----LAPVEVA-------HISGISAVTAGTYHAVALGKDG-GVWTWGANSSGQLGDGA 286
Query: 352 TIDFFAPAIVLWPPLTEEFK 371
D PA V P E K
Sbjct: 287 WSDRAVPARV---PGLERVK 303
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 96/353 (27%), Positives = 137/353 (38%), Gaps = 70/353 (19%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + AP+ + +V G SLA+ + G +W WG L D +T
Sbjct: 1138 LGDGTTERRAAPVVVRGLTGVVAVSTGAWHSLALRSDGTVWAWGANGFGQLGDGTT---- 1193
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+S TP V VV + G H +A+ S G ++WG N GQLG G
Sbjct: 1194 --LSRTTPVRVAGL--QKVVAIGAGGYHALAVRSDGS--------VWAWGYNAFGQLGDG 1241
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
ESRL P +E + V V G H+ L + + +G GQL
Sbjct: 1242 TAESRLLPVRVEGLSN-----VTSVAGGDHHSLAL--------LADGSLGAWGNNAAGQL 1288
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNAS 288
G GT + VK + +V V G HT + G VW+WG LG +++
Sbjct: 1289 GDGTGTTRYSRVWVKGVDG---VVEVRAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDST 1345
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
TR I P + P + GA H+ V G +W+WGR G LG
Sbjct: 1346 RTR------IVPRPV-------PGLSGVTAIGAGARHSFAVGPKG-TVWAWGRNSHGQLG 1391
Query: 349 TGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSS 401
G + P V +E + + +GG D + A +RD +SS
Sbjct: 1392 LGDNANRAEPLRV------KELAEVSVVSGGADFSL-------AMQRDGTVSS 1431
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/309 (27%), Positives = 123/309 (39%), Gaps = 51/309 (16%)
Query: 60 LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T AP++ I +V AG ++A+ G +W WG S G +
Sbjct: 232 LGDGTFTQRLAPVEVAHISGISAVTAGTYHAVALGKDGGVWTWGAN---SSGQLGDGAWS 288
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P+ V V VA +AL+ AG +WGAN +GQLG +
Sbjct: 289 DRAVPARVPGLE--RVKAVASMDASSLALLEAGS--------VLAWGANGSGQLGDSGTD 338
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P + +V V G+ H L + W +G G GQLGHG
Sbjct: 339 DRATPGEVPGLR-----SVAAVVGGAQHALALRG--------DGTLWAWGGGLAGQLGHG 385
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
++ +VP + L + S+ G FH+ G VWSWG L + R+
Sbjct: 386 GSERHVVPAPLLRLAD---VASMAAGSFHSLAALGDGTVWSWGRNTYGQLGDGTTAERHA 442
Query: 294 AGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
A + + G +G G VA H++ V DG +W+WGR +G LG G T
Sbjct: 443 A------VRVEGLSGIRG--------VAASGHHSLAVGADG-TVWAWGRNAAGQLGDGST 487
Query: 353 IDFFAPAIV 361
D P V
Sbjct: 488 RDRARPVAV 496
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 126/301 (41%), Gaps = 53/301 (17%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMW---GNCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
K P I SV G LA GALW W G+ L + ST TPSP
Sbjct: 897 KLPSNIMSVALGETHGLAAGEDGALWAWGANGSGQLGEGST----------TPSP----- 941
Query: 126 GHTVVKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
T V+V G E VA VSAG + +D ++WGAN +GQLG G S+ PK +
Sbjct: 942 --TPVRVK-GLEG-VASVSAGRAFSLAVRQDGTAWAWGANPSGQLGDGTNHSQRVPKQVT 997
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA-LVP 241
+ + V ++ G+ H L + WT+G GQLG GT+ + P
Sbjct: 998 SVKR-----VRAMSAGAHHVVALGE--------DGAVWTWGDNTLGQLGDGTSAPTWMWP 1044
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
QV EL + +V G + V G +WG + L + G ++P+
Sbjct: 1045 RQVPELRD---VEAVAAGEQFSVAVLVGGGAHAWGSNE------YGQLGDGKTGPRLTPV 1095
Query: 302 LISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ K + PV+ V A H V + DG + +WG G LG G T AP +
Sbjct: 1096 QVR---IEASKLRQPVRTVRAWAQHAVALMADG-TVQAWGDNAHGQLGDGTTERRAAPVV 1151
Query: 361 V 361
V
Sbjct: 1152 V 1152
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 126/318 (39%), Gaps = 61/318 (19%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L D + + P+ K+ ++ AGG +LA+ + G++W WG L D + E
Sbjct: 1188 LGDGTTLSRTTPVRVAGLQKVVAIGAGGYHALAVRSDGSVWAWGYNAFGQLGDGTAE--- 1244
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V V VA G H +AL++ G +WG N GQLG G
Sbjct: 1245 ---SRLLPVRVEGL--SNVTSVAGGDHHSLALLADGS--------LGAWGNNAAGQLGDG 1291
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+R ++ + V EV G+ HT L + WT+G + QL
Sbjct: 1292 TGTTRYSRVWVKGVD-----GVVEVRAGAAHTLALRG--------DGTVWTWGDNTHSQL 1338
Query: 231 GHG--TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPN 286
G G +T++ +VP + +P + ++ G H+ V G VW+WG LGL N
Sbjct: 1339 GAGDDSTRTRIVP---RPVPGLSGVTAIGAGARHSFAVGPKGTVWAWGRNSHGQLGLGDN 1395
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
A+ R E P+ + K V V G A L + SWG G
Sbjct: 1396 AN--RAE------PLRV--------KELAEVSVVSGGADFSLAMQRDGTVSSWGSSLHGA 1439
Query: 347 LGTGKTIDFFAPAIVLWP 364
LG G +P V P
Sbjct: 1440 LGLGTAGQRSSPGQVALP 1457
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 119/285 (41%), Gaps = 51/285 (17%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFH 125
+ P++ +V+A ++A+ G + WG+ L D +TE P V
Sbjct: 1105 RQPVR--TVRAWAQHAVALMADGTVQAWGDNAHGQLGDGTTE------RRAAPVVVRGLT 1156
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G VV V+ G+ H +AL S D ++WGAN GQLG G SR P +
Sbjct: 1157 G--VVAVSTGAWHSLALRS--------DGTVWAWGANGFGQLGDGTTLSRTTPVRVAGLQ 1206
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ V + G +H L R + W +G GQLG GT +S L+P +V+
Sbjct: 1207 K-----VVAIGAGGYHA--LAVRS------DGSVWAWGYNAFGQLGDGTAESRLLPVRVE 1253
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L + SV G H+ + + G + +WG L TR S + + G
Sbjct: 1254 GLSN---VTSVAGGDHHSLALLADGSLGAWGNNAAGQLGDGTGTTR------YSRVWVKG 1304
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
V+V GAAHT+ + DG +W+WG LG G
Sbjct: 1305 -------VDGVVEVRAGAAHTLALRGDG-TVWTWGDNTHSQLGAG 1341
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 120/329 (36%), Gaps = 59/329 (17%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + P+++ +V AG S+A+ G +W WG GF
Sbjct: 532 LGDGTTVDRLTPVRVARLDSVVAVAAGTYFSMALRGDGTVWTWGE----------GFEGQ 581
Query: 114 SSFTPS-----PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
PV V +VA GS H +A+ D ++WG N GQLG
Sbjct: 582 VGDGGGVQRLFPVQVAGLTNVTRVAAGSAHALAVRG--------DGTVWAWGDNGEGQLG 633
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G R RP + + V+ G H+ L + +G G
Sbjct: 634 DGTWSDRFRPVQVPGLT-----GITAVSGGRSHSMALHG--------DGSVRAWGYNGYG 680
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG GT S + P V P + ++ H + + G + WG +
Sbjct: 681 QLGDGTFTSRVRPAVV---PGLTGIQALHPSHLHVLALHADGTLRGWGYNR------FGQ 731
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
L AG + P+ + G G ++A G AHT++V DG L +WG SG LG
Sbjct: 732 LGLGAAGWSSRPVQVRGLG-------RVDRLAVGRAHTLMVRPDGAVL-AWGENASGQLG 783
Query: 349 TGKTIDFFAPAIVLWPPLTEEFKQDELNT 377
G T P +V P L++
Sbjct: 784 DGTTTHRAGPVLVRGVPCVRSVASGVLHS 812
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 90/222 (40%), Gaps = 38/222 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V VA G H +AL G ++WGAN GQLG G SR+ P ++
Sbjct: 802 VRSVASGVLHSLALACDGS--------VWAWGANGRGQLGDGTTASRVIPARVDGLQGAV 853
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
G ALL + W +G +GQLG G+T VP Q+K LP
Sbjct: 854 ----AVAAGGDASLALLA---------DGTAWAWGANAHGQLGDGSTSDRAVPGQLK-LP 899
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +SV G H G +W+WG G G S T + +P+ + G
Sbjct: 900 SNI--MSVALGETHGLAAGEDGALWAWG-ANGSGQLGEGSTTPSP-----TPVRVKG--- 948
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ V+ G A ++ V DG W+WG SG LG G
Sbjct: 949 ----LEGVASVSAGRAFSLAVRQDGTA-WAWGANPSGQLGDG 985
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 109/287 (37%), Gaps = 60/287 (20%)
Query: 84 SLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
SLA+ G W WG + L D ST PS ++ VA G H +
Sbjct: 862 SLALLADGTAWAWGANAHGQLGDGSTSDRAVPGQLKLPS--------NIMSVALGETHGL 913
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
A GED ++WGAN +GQLG G P ++ V V+ G
Sbjct: 914 A--------AGEDGALWAWGANGSGQLGEGSTTPSPTPVRVKGLE-----GVASVSAGRA 960
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
+ L R+ + W +G +GQLG GT S VP+QV + + + ++ G
Sbjct: 961 FS--LAVRQ------DGTAWAWGANPSGQLGDGTNHSQRVPKQVTSVKR---VRAMSAGA 1009
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS------PILISGNGPHGPKFQ 314
H + G VW+WG T + GD S P + P+ +
Sbjct: 1010 HHVVALGEDGAVWTWGDN-----------TLGQLGDGTSAPTWMWPRQV-------PELR 1051
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D VA G +V V G +WG G LG GKT P V
Sbjct: 1052 DVEAVAAGEQFSVAVLVGGGAH-AWGSNEYGQLGDGKTGPRLTPVQV 1097
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 122/333 (36%), Gaps = 87/333 (26%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ V AG +LA+ G +W WG+ G + F P V G + V
Sbjct: 601 NVTRVAAGSAHALAVRGDGTVWAWGDN---GEGQLGDGTWSDRFRPVQVPGLTG--ITAV 655
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII----------- 181
+ G H +AL G +WG N GQLG G SR+RP ++
Sbjct: 656 SGGRSHSMALHGDGS--------VRAWGYNGYGQLGDGTFTSRVRPAVVPGLTGIQALHP 707
Query: 182 -------------------ETFNQ----DSPWA-----------VYEVTCGSFHTALLTH 207
F Q + W+ V + G HT ++
Sbjct: 708 SHLHVLALHADGTLRGWGYNRFGQLGLGAAGWSSRPVQVRGLGRVDRLAVGRAHTLMV-- 765
Query: 208 RKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
RP+ + + W GEN GQLG GTT P V+ +P + SV G+ H+
Sbjct: 766 --RPDGAV--LAW----GENASGQLGDGTTTHRAGPVLVRGVP---CVRSVASGVLHSLA 814
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
++ G VW+WG L + +R + P + G Q V VA G
Sbjct: 815 LACDGSVWAWGANGRGQLGDGTTASR------VIPARVDG-------LQGAVAVAAGGDA 861
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
++ + DG W+WG G LG G T D P
Sbjct: 862 SLALLADGTA-WAWGANAHGQLGDGSTSDRAVP 893
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 78/209 (37%), Gaps = 30/209 (14%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D +WG N +GQLG G R P ++ V V G H+ L
Sbjct: 768 DGAVLAWGENASGQLGDGTTTHRAGPVLVRGVP-----CVRSVASGVLHSLALA------ 816
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ W +G GQLG GTT S ++P +V L V + + + + G
Sbjct: 817 --CDGSVWAWGANGRGQLGDGTTASRVIPARVDGLQGAVAVAAGGDASL---ALLADGTA 871
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+WG L ++ R G P I + VA G H + +D
Sbjct: 872 WAWGANAHGQLGDGSTSDRAVPGQLKLPSNI-------------MSVALGETHGLAAGED 918
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G LW+WG SG LG G T P V
Sbjct: 919 G-ALWAWGANGSGQLGEGSTTPSPTPVRV 946
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 89/236 (37%), Gaps = 55/236 (23%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPI------KICSV 77
+ SL DG LG G+N A L D + T + + + V
Sbjct: 1266 HHSLALLADGSLGAWGNN--------------AAGQLGDGTGTTRYSRVWVKGVDGVVEV 1311
Query: 78 KAGGMMSLAIDNAGALWMWGN-----CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+AG +LA+ G +W WG+ D ST + P PV G V +
Sbjct: 1312 RAGAAHTLALRGDGTVWTWGDNTHSQLGAGDDSTR------TRIVPRPVPGLSG--VTAI 1363
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G+ H A+ G ++WG N++GQLGLGD +R P ++ + S
Sbjct: 1364 GAGARHSFAV--------GPKGTVWAWGRNSHGQLGLGDNANRAEPLRVKELAEVS---- 1411
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V G +L R + ++G +G LG GT P QV LP
Sbjct: 1412 --VVSGGADFSLAMQR-------DGTVSSWGSSLHGALGLGTAGQRSSPGQVA-LP 1457
>gi|307106699|gb|EFN54944.1| hypothetical protein CHLNCDRAFT_134694 [Chlorella variabilis]
Length = 434
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 117/233 (50%), Gaps = 28/233 (12%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS H +AL+S T G + SWG +GQLG GD E R P+ + +
Sbjct: 9 VIGLACGSSHSLALIS---TPSGS--MVLSWGRGEDGQLGHGDAEDRQEPQAVFSLLHRG 63
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+V+ CG+ ++ + + +++G G+ G+LG G + +P + L
Sbjct: 64 ATSVH---CGAEYSMAVAGGDK-------QVYSWGWGDFGRLGTGDVKDVFIPCPLPALA 113
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ SV CG HT V ++ G ++++G + G C S+ D + P L++
Sbjct: 114 GR-RVASVACGDTHTLVATAEGQLFAFGRNQN-GQCGLGSIQ-----DCLEPQLVT---- 162
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ V VACGA H++ VT +G +++ WG GR G +G G++ D P +
Sbjct: 163 -ALQGKEVVAVACGAEHSMCVTSEG-EVYCWGWGRYGNIGDGESQDRHLPTLA 213
Score = 74.7 bits (182), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 111/284 (39%), Gaps = 42/284 (14%)
Query: 76 SVKAGGMMSLAI---DNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
SV G S+A+ D W WG D G + F P P+ G V V
Sbjct: 66 SVHCGAEYSMAVAGGDKQVYSWGWG-----DFGRLGTGDVKDVFIPCPLPALAGRRVASV 120
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG H + + G+ +++G N NGQ GLG + L P+++ V
Sbjct: 121 ACGDTHTLVATAEGQ--------LFAFGRNQNGQCGLGSIQDCLEPQLVTALQGKE---V 169
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG+ H+ +T E CW G G G +G G +Q +P K L + V
Sbjct: 170 VAVACGAEHSMCVTSEG------EVYCW--GWGRYGNIGDGESQDRHLPTLAKGL-EGVK 220
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ V+CG H+ V G +++WG A L + + D P +
Sbjct: 221 VAQVNCGWRHSIAVDEGGAMYTWGWGA------YAQLMQGDRKDHYVPKRVE-------A 267
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
Q VA G HT+ G +L++ G + G G G D
Sbjct: 268 VQQVATVAGGWRHTMAADSQG-RLFASGWNKFGQCGVGHNEDVV 310
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 125/289 (43%), Gaps = 43/289 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF-SLVSSFTPSPVWDFHGHTVVK 131
++ SV G +L G L+ +G + + + G S+ P V G VV
Sbjct: 116 RVASVACGDTHTLVATAEGQLFAFGR----NQNGQCGLGSIQDCLEPQLVTALQGKEVVA 171
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+EH + + S GE Y C+ WG G +G G+ + R P + +
Sbjct: 172 VACGAEHSMCVTSEGEVY------CWGWG--RYGNIGDGESQDRHLPTLAKGLEGVK--- 220
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CG H+ + D +M +T+G G QL G + VP++V+ + Q
Sbjct: 221 VAQVNCGWRHSIAV-------DEGGAM-YTWGWGAYAQLMQGDRKDHYVPKRVEAVQQ-- 270
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V G HT S G +++ G K G+ N + R + +A++ +
Sbjct: 271 -VATVAGGWRHTMAADSQGRLFASGWNKFGQCGVGHNEDVVRVQQVEALAGERV------ 323
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
VQV G HT+ VT G K +SWGR +G LG D +P
Sbjct: 324 -------VQVKSGWKHTMAVTHTG-KFFSWGRNVNGQLGHSGMQDSNSP 364
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 74/184 (40%), Gaps = 36/184 (19%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
+K+ V G S+A+D GA++ WG G ++ + + P V
Sbjct: 219 VKVAQVNCGWRHSIAVDEGGAMYTWG---------WGAYAQLMQGDRKDHYVPKRVEAVQ 269
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
V VA G H +A S G + G N GQ G+G E +R + +E
Sbjct: 270 --QVATVAGGWRHTMAADSQGRLFAS--------GWNKFGQCGVGHNEDVVRVQQVEALA 319
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ V +V G HT +TH + +++G NGQLGH Q + P ++
Sbjct: 320 GER---VVQVKSGWKHTMAVTHTGK--------FFSWGRNVNGQLGHSGMQDSNSPVELA 368
Query: 246 ELPQ 249
L +
Sbjct: 369 ALSR 372
>gi|10047261|dbj|BAB13419.1| KIAA1593 protein [Homo sapiens]
Length = 953
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/236 (30%), Positives = 100/236 (42%), Gaps = 29/236 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+I V G SLA+ A ++ WG G +P + G ++
Sbjct: 33 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQ 90
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H L +G + WG N GQLGL D R P ++++ S
Sbjct: 91 VAAGGAHSFVLTLSG--------AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKI 140
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
VY + CG HTA LT E +TFG G GQLGH +T + P +V EL +
Sbjct: 141 VY-ICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI 191
Query: 252 YLVSVDCGLFHTSV-VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + CG HTS V S+G ++S+ GL N L + SP + GN
Sbjct: 192 -VTEIACGRQHTSAFVPSSGRIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 240
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 68/238 (28%), Positives = 108/238 (45%), Gaps = 40/238 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQD 187
+V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 35 IVQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LG 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 86 IPFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL 135
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 136 -RSQKIVYICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTSHEINPRKV---- 184
Query: 308 PHGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 185 -----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 237
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +V V CG +H+ +S A +V+ WG K L + + + +L G
Sbjct: 33 IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGTDCKKQTSPQLLKSLL-------G 85
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F +QVA G AH+ ++T G ++ WGR + G LG D + P ++
Sbjct: 86 IPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGLNDENDRYVPNLL 132
>gi|357147842|ref|XP_003574510.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
distachyon]
Length = 389
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 101/359 (28%), Positives = 151/359 (42%), Gaps = 66/359 (18%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK---TNHKAPIKICSVKAGG 81
SL C DG+L G N Q T+G P + +S A +KI GG
Sbjct: 52 NSLAICDDGRLFTWGWN--------QRGTLGHPPETKTESSPAPVEALAGVKIVQAAIGG 103
Query: 82 MMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
LA+D+ G + WG C E G + P+P V +VA G
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPTPQRCALKLKVQQVAAGG 163
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H V L G + +WG GD + P ++ + V +
Sbjct: 164 THSVVLTQEGHVW--------TWGQ----PWPPGDIKQISTPVRVQGLEK-----VMMIA 206
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G+FH L+ +++ W +G E GQLG G TQ P +V+ L + LV +
Sbjct: 207 VGAFHNLALSE--------DAVLWAWGNNEYGQLGIGDTQPRSQPIRVEGL-SGLSLVDI 257
Query: 257 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPI---LISGNGPHGP 311
G +H++ ++ G+V++WG E G LG + S + P+ L+ G
Sbjct: 258 AAGGWHSTALTKDGEVYAWGRGEHGRLGFGDDKS-------SHMVPLKVQLLDG------ 304
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV---LWPPLT 367
+D VQV+CG H+V +T DG +++S+GRG G LG G+ + P V L PP T
Sbjct: 305 --EDIVQVSCGGTHSVALTSDG-RIFSYGRGDHGRLGYGRKVTTGHPMEVPLNLPPPKT 360
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 85/186 (45%), Gaps = 19/186 (10%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLG+G + + + + P+AV V GS ++ + R
Sbjct: 12 AWGSGEDGQLGMGGCDEKDWAHRVAALD---PYAVSAVVAGSRNSLAICDDGR------- 61
Query: 218 MCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ P V+ L V +V G +H V G ++WG
Sbjct: 62 -LFTWGWNQRGTLGHPPETKTESSPAPVEAL-AGVKIVQAAIGGWHCLAVDDKGRAYAWG 119
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYK 335
+ G C + + A+ + + P + V QVA G H+V++T +G+
Sbjct: 120 GNE-YGQCGEEPERKEDGTRALRRDIPT---PQRCALKLKVQQVAAGGTHSVVLTQEGH- 174
Query: 336 LWSWGR 341
+W+WG+
Sbjct: 175 VWTWGQ 180
>gi|397488796|ref|XP_003815430.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Pan
paniscus]
Length = 815
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 127/278 (45%), Gaps = 50/278 (17%)
Query: 80 GGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
G S + L+M WG L G S VS P+ V V AC
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGL------GSKSAVSK--PTCVKALKPEKVKLAAC 94
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H + G Y+ G NN GQLGLGD E R +I F S + +
Sbjct: 95 GRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNTFHVISFFT--SEHKIKQ 144
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
++ GS +A LT R + +G GQ+G + VP+QV + + V +
Sbjct: 145 LSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWI 195
Query: 255 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
S CG +H++ V++ G+++ +G E G LGL PN L G+ +P L+S P
Sbjct: 196 S--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----GNHRTPQLVS----EIP- 242
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 243 -EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|224043366|ref|XP_002198142.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Taeniopygia
guttata]
Length = 537
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 126/292 (43%), Gaps = 36/292 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG-NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
K C ++ I ++ ++++G NC S+ G S+ P + G +
Sbjct: 29 KACVFGTSANEAIYITHSDEVFVFGLNC----SNCLGTGDNQSTIVPKKLEALCGKKISS 84
Query: 132 VACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ GS HVV GE Y +WG N QLG G + P ++
Sbjct: 85 LSYGSGPHVVLCTEDGEVY--------AWGHNGYSQLGNGTTNQGITP--VQVCTNLLIK 134
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V EV CGS H+ L+ ++ + +G GQ+G G+T + P +V Q
Sbjct: 135 KVVEVACGSHHSMALS--------MDGDLYAWGYNNCGQVGSGSTANQPTPRRVSNCLQG 186
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V + CG + V + G+V+ WG N L G+ ++P ++ H
Sbjct: 187 KIVVGIACGQTSSMAVVNNGEVYGWGYNG------NGQLGLGNNGNQLTPCRVA--ALHS 238
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+Q+ACG AHT+ +TD+G L++WG G LGTG + +P ++
Sbjct: 239 VCV---LQIACGYAHTLALTDEGL-LYAWGANTYGQLGTGNKSNQLSPVQIM 286
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 80/321 (24%), Positives = 126/321 (39%), Gaps = 52/321 (16%)
Query: 91 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ WG+ L + +T G + V T + VV+VACGS H +AL G+
Sbjct: 100 GEVYAWGHNGYSQLGNGTTNQGITPVQVCTNLLI-----KKVVEVACGSHHSMALSMDGD 154
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
Y +WG NN GQ+G G ++ P+ + Q V + CG + + +
Sbjct: 155 LY--------AWGYNNCGQVGSGSTANQPTPRRVSNCLQGK--IVVGIACGQTSSMAVVN 204
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+ +G NGQLG G + L P +V L V ++ + CG HT ++
Sbjct: 205 NGE--------VYGWGYNGNGQLGLGNNGNQLTPCRVAAL-HSVCVLQIACGYAHTLALT 255
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
G +++WG L + +SP+ I + AC +AHT
Sbjct: 256 DEGLLYAWGANT------YGQLGTGNKSNQLSPVQIMMEKERVVEI-----AACHSAHTS 304
Query: 328 LVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEEFKQDELNTG 378
+++ WG RG+S T FA V+W L+ E +D L
Sbjct: 305 AAKTQSGQVYMWGQCRGQSVTFPHLTHFACTDDVFACFATPAVMWRLLSVE-HEDFLTVA 363
Query: 379 GLDDEIKTKDLEGAEERDEKL 399
E K+ + E D K
Sbjct: 364 ----ESLKKEFDSPETSDLKF 380
>gi|403366107|gb|EJY82845.1| RCC1 repeat domain protein [Oxytricha trifallax]
Length = 2141
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 112/240 (46%), Gaps = 30/240 (12%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F PS V ++KV+CG+ +AL G YSWG N+G LG G++
Sbjct: 241 FKPSIVKFDASIIIIKVSCGNSFTLALSQEGH--------VYSWGLGNSGGLGQGEQNVS 292
Query: 176 LRPKIIETFNQDSPWA-VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
+ P II+ + + ++ CGS H L H + + +++G G+ G+LGHG
Sbjct: 293 MTPNIIKYQKNGHLFQNIKDIACGSNHVLSLDH--------QGIVYSWGNGQGGRLGHGD 344
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+P+++ L QY L+ ++ G ++ +S +++ W G+GL + L +
Sbjct: 345 ETGENIPKEIIGLRQYKILM-IEAGEGSSAAISIKNELFIW----GVGL--HGRLGTGKT 397
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+ + P+++ K Q +A G+ H++ + +G K WG + G LG +D
Sbjct: 398 ANVLKPVML-----EDLKDQKVEDIALGSNHSLCILRNG-KAMCWGSSKDGKLGLETALD 451
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 123/283 (43%), Gaps = 37/283 (13%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGH- 127
A I I V G +LA+ G ++ WG L +S G S TP+ + + +GH
Sbjct: 250 ASIIIIKVSCGNSFTLALSQEGHVYSWG---LGNSGGLGQGEQNVSMTPNIIKYQKNGHL 306
Query: 128 --TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
+ +ACGS HV++L G + YSWG G+LG GD PK I
Sbjct: 307 FQNIKDIACGSNHVLSLDHQG--------IVYSWGNGQGGRLGHGDETGENIPKEIIGLR 358
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
Q + + + G +A ++ +++ + +G+G +G+LG G T + L P ++
Sbjct: 359 Q---YKILMIEAGEGSSAAIS--------IKNELFIWGVGLHGRLGTGKTANVLKPVMLE 407
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+L + + G H+ + G WG K L +L RN L
Sbjct: 408 DLKDQ-KVEDIALGSNHSLCILRNGKAMCWGSSKDGKLGLETALDRNFTQPKELVTLDK- 465
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ Q+A G H++ +T++G +++S+G + G LG
Sbjct: 466 --------EKLYQIAAGPFHSIALTENG-EIYSFGNSKDGKLG 499
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/223 (23%), Positives = 95/223 (42%), Gaps = 39/223 (17%)
Query: 155 VCYSWGANNNGQLGLGDRESRL-------------RPKIIETFNQDSPWAVYEVTCGSFH 201
+ ++WG N G+LG+ E + +P I++ D+ + +V+CG+
Sbjct: 207 IVFTWGVVNEGRLGIALNEKEIENIEQKNNELIPFKPSIVKF---DASIIIIKVSCGNSF 263
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ---YVYLVSVDC 258
T L+ E +++GLG +G LG G ++ P +K + + + C
Sbjct: 264 TLALSQ--------EGHVYSWGLGNSGGLGQGEQNVSMTPNIIKYQKNGHLFQNIKDIAC 315
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
G H + G V+SWG +G L +E G+ I +I G + +
Sbjct: 316 GSNHVLSLDHQGIVYSWGNGQGGRLGHG-----DETGENIPKEII------GLRQYKILM 364
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G + ++ +L+ WG G G LGTGKT + P ++
Sbjct: 365 IEAGEGSSAAISIKN-ELFIWGVGLHGRLGTGKTANVLKPVML 406
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 119/295 (40%), Gaps = 47/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+KI V G LA+ + GA + WG ++VS P+ + ++
Sbjct: 675 MKIKHVSTGYFHVLAVTHEGATFGWGRNDNGQLGMGRKDTVVSK--PTRIKSLQDKVIIM 732
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--------DR--------ESR 175
A G H + L GE ++C G N G+LG+G D+ +
Sbjct: 733 TASGESHSLFLSDLGE------VLC--SGFNEFGELGIGLNSTSGGADKKENPDEIYDEN 784
Query: 176 LRPKIIETFNQDSPWAVYE------VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
+ ++IET + +P + + G H+ + KR ++ W G G +GQ
Sbjct: 785 YQRQLIETKIELTPKIIKGLESIGFIAAGKNHSIAIRTYKRKEKAMKLFTW--GCGWHGQ 842
Query: 230 LGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
GHG+ Q+ +P+ VK + + + CG HT + + G +W +G + +G+
Sbjct: 843 TGHGSWQNDYLPQIVKVPVLKDTKFIQASCGSKHTIALDTTGHIWFFGYKPSVGIEDFND 902
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRG 342
+ +P K Q+P + ++ G H + VT G ++ +G+
Sbjct: 903 EKQFMPARLETP----------SKIQEPFKFISSGEEHNLAVTQSGL-VYGFGKN 946
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 64/281 (22%), Positives = 118/281 (41%), Gaps = 53/281 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI ++AG S AI L++WG + G + P + D V +
Sbjct: 361 KILMIEAGEGSSAAISIKNELFIWG---VGLHGRLGTGKTANVLKPVMLEDLKDQKVEDI 417
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR--LRPKIIETFNQDSPW 190
A GS H + ++ G+ +C WG++ +G+LGL R +PK + T +++
Sbjct: 418 ALGSNHSLCILRNGKA------MC--WGSSKDGKLGLETALDRNFTQPKELVTLDKEK-- 467
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+Y++ G FH+ LT ++FG ++G+LG+ + + ++P+
Sbjct: 468 -LYQIAAGPFHSIALTEN--------GEIYSFGNSKDGKLGYDEIKGNV------QIPRK 512
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +C +F + GL + N+ D ++ +IS N G
Sbjct: 513 I----TNCPIF--------------ARKTGLNDRRDKYQLFNQFDDQMT--VISNNQQLG 552
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ +Q CG TV + +DG +++ G + G LG K
Sbjct: 553 GC--EVIQAQCGFNSTVFLLNDG-QMYVCGSNKYGQLGFSK 590
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 67/260 (25%)
Query: 118 PSPVWDFHGHTVVK---VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
PSP+ +H +K V+ G HV+A+ G T+ WG N+NGQLG+G +++
Sbjct: 663 PSPLTIYHDAVQMKIKHVSTGYFHVLAVTHEGATF--------GWGRNDNGQLGMGRKDT 714
Query: 175 RL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ +P I++ QD + G H+ L+ D+ E +C G E G+LG G
Sbjct: 715 VVSKPTRIKSL-QDK--VIIMTASGESHSLFLS------DLGEVLCS--GFNEFGELGIG 763
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
++ ++ KE P +Y + L T +
Sbjct: 764 LNSTSGGADK-KENPDEIYDENYQRQLIETKI---------------------------- 794
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV-----TDDGYKLWSWGRGRSGVLG 348
++P +I G G +A G H++ + + KL++WG G G G
Sbjct: 795 ---ELTPKIIKGLESIGF-------IAAGKNHSIAIRTYKRKEKAMKLFTWGCGWHGQTG 844
Query: 349 TGKTIDFFAPAIVLWPPLTE 368
G + + P IV P L +
Sbjct: 845 HGSWQNDYLPQIVKVPVLKD 864
>gi|118084892|ref|XP_417063.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Gallus gallus]
Length = 537
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS HV+ GE Y +WG N QLG G
Sbjct: 67 STIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVY--------AWGHNGYSQLGNGAT 118
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ P ++ V EV CGS H+ L+ + + +G GQ+G
Sbjct: 119 NQGVTP--VQVCTNLLLKKVIEVACGSHHSMALS--------FDGDLYAWGYNNCGQVGS 168
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + P +V Q +V + CG + V + G+V+ WG N L
Sbjct: 169 GSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNG------NGQLGLG 222
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ ++P ++ HG +Q+ACG AHT+ +TD+G L++WG G LGTG
Sbjct: 223 NNGNQLTPCRVA--ALHGVCI---LQIACGYAHTLALTDEGL-LYAWGANTYGQLGTGNK 276
Query: 353 IDFFAPAIVL 362
+ +P ++
Sbjct: 277 SNQLSPLQIM 286
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 137/340 (40%), Gaps = 53/340 (15%)
Query: 73 KICSVKAG-GMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
KI S+ G G L G ++ WG+ L + +T G + V T +
Sbjct: 81 KISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCT-----NLLLKK 135
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL G+ Y +WG NN GQ+G G ++ P+ + QD
Sbjct: 136 VIEVACGSHHSMALSFDGDLY--------AWGYNNCGQVGSGSTANQPTPRRVSNCLQDK 187
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + + +G NGQLG G + L P +V L
Sbjct: 188 --MVVGIACGQTSSMAVVNNGE--------VYGWGYNGNGQLGLGNNGNQLTPCRVAAL- 236
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V ++ + CG HT ++ G +++WG L + +SP+ I
Sbjct: 237 HGVCILQIACGYAHTLALTDEGLLYAWGANT------YGQLGTGNKSNQLSPLQIMMEKE 290
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
+ AC +AHT +++ WG RG+S VL T FA
Sbjct: 291 RVVEI-----AACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPHLTHFACTDDVFACFATP 345
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V+W L+ E ++D L E K+ + E D K
Sbjct: 346 AVMWRLLSVE-QEDFLTVA----ESLKKEFDSPETADLKF 380
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G +QS +VP++++ L + + +S G H + + G+V++WG
Sbjct: 50 FVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGP-HVLLCTEDGEVYAWGHN 108
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L ++P+ + N + ++VACG+ H++ ++ DG L++
Sbjct: 109 G------YSQLGNGATNQGVTPVQVCTN----LLLKKVIEVACGSHHSMALSFDG-DLYA 157
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 158 WGYNNCGQVGSGSTANQPTPRRV 180
>gi|158257096|dbj|BAF84521.1| unnamed protein product [Homo sapiens]
Length = 815
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 127/278 (45%), Gaps = 50/278 (17%)
Query: 80 GGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
G S + L+M WG L G S VS P+ V V AC
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGL------GSKSAVSK--PTCVKALKPEKVKLAAC 94
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H + G Y+ G NN GQLGLGD E R +I F S + +
Sbjct: 95 GRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNTFHVISFFT--SEHKIKQ 144
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
++ GS +A LT R + +G GQ+G + VP+QV + + V +
Sbjct: 145 LSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWI 195
Query: 255 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
S CG +H++ V++ G+++ +G E G LGL PN L G+ +P L+S P
Sbjct: 196 S--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----GNHRTPQLVS----EIP- 242
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 243 -EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|196012194|ref|XP_002115960.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
gi|190581736|gb|EDV21812.1| hypothetical protein TRIADDRAFT_59918 [Trichoplax adhaerens]
Length = 897
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 104/232 (44%), Gaps = 39/232 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG + N ++QF P ++ SK + V G SLA+ N G
Sbjct: 114 DGQLGVTDQN------LKQFYR--TPRQIKSLSK------FAVVQVACGQSHSLAVINDG 159
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG+ + S VSS P + G +V++A G H +A+ ++G
Sbjct: 160 TVFSWGSNRYGQLGID---SNVSSVEPKQILKLSGFYIVQIAAGGAHSLAITNSG----- 211
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETF-NQDSPWAVYEVTCGSFHTALLTHRKR 210
+WG N+ GQLGLG + L P + + +Q +A CG HTA+LT
Sbjct: 212 ---ALLTWGKNSFGQLGLGTNDGVLSPTCVSSLRSQHIAYAA----CGEDHTAVLTK--- 261
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
E +TFG G +GQLGH + P+ V +L V + + CG F+
Sbjct: 262 -----EGGVFTFGAGSSGQLGHNSLSHHCSPQMVVDLMGIV-VTQITCGRFY 307
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 101/208 (48%), Gaps = 25/208 (12%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N++GQLG+ D+ + + S +AV +V CG H+ + + +
Sbjct: 107 YAWGDNSDGQLGVTDQNLKQFYRTPRQIKSLSKFAVVQVACGQSHSLAVIN--------D 158
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G GQLG + S++ P+Q+ +L + Y+V + G H+ ++++G + +WG
Sbjct: 159 GTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSGF-YIVQIAAGGAHSLAITNSGALLTWG 217
Query: 277 MEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
LGL N + +SP +S + Q ACG HT ++T +G
Sbjct: 218 KNSFGQLGLGTNDGV--------LSPTCVS-----SLRSQHIAYAACGEDHTAVLTKEG- 263
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
++++G G SG LG +P +V+
Sbjct: 264 GVFTFGAGSSGQLGHNSLSHHCSPQMVV 291
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 104/241 (43%), Gaps = 40/241 (16%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
HT+ ++CG H + L+ G+ YS G+N+ GQ G R + + F
Sbjct: 33 NHTIKLISCGLNHTILLLQDGQ--------IYSCGSNDYGQTG--------RQRNNKRFA 76
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG---HGTTQSALVPE 242
+ + +T S + A H ND ++ + +G +GQLG Q P
Sbjct: 77 RIDAFESMRITNVSSNGA--NHNLAIND--KNCIYAWGDNSDGQLGVTDQNLKQFYRTPR 132
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISP 300
Q+K L ++ +V V CG H+ V + G V+SWG + LG+ N S + +S
Sbjct: 133 QIKSLSKFA-VVQVACGQSHSLAVINDGTVFSWGSNRYGQLGIDSNVSSVEPKQILKLSG 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
I VQ+A G AH++ +T+ G L +WG+ G LG G +P
Sbjct: 192 FYI-------------VQIAAGGAHSLAITNSG-ALLTWGKNSFGQLGLGTNDGVLSPTC 237
Query: 361 V 361
V
Sbjct: 238 V 238
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 96/211 (45%), Gaps = 31/211 (14%)
Query: 72 IKICSVKAGGM-MSLAIDNAGALWMWGNCP-----LPDSSTEGGFSLVSSFTPSPVWDFH 125
++I +V + G +LAI++ ++ WG+ + D + + + TP +
Sbjct: 84 MRITNVSSNGANHNLAINDKNCIYAWGDNSDGQLGVTDQNLKQFYR-----TPRQIKSLS 138
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
VV+VACG H +A+++ G +SWG+N GQLG+ S + PK I
Sbjct: 139 KFAVVQVACGQSHSLAVINDG--------TVFSWGSNRYGQLGIDSNVSSVEPKQILKL- 189
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
S + + ++ G H+ +T+ T+G GQLG GT L P V
Sbjct: 190 --SGFYIVQIAAGGAHSLAITN--------SGALLTWGKNSFGQLGLGTNDGVLSPTCVS 239
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
L ++ CG HT+V++ G V+++G
Sbjct: 240 SLRSQ-HIAYAACGEDHTAVLTKEGGVFTFG 269
>gi|386780927|ref|NP_001247543.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|402902026|ref|XP_003913930.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Papio anubis]
gi|355754700|gb|EHH58601.1| Regulator of chromosome condensation and BTB domain-containing
protein 1 [Macaca fascicularis]
gi|383419643|gb|AFH33035.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
gi|383419645|gb|AFH33036.1| RCC1 and BTB domain-containing protein 1 [Macaca mulatta]
Length = 531
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 106/249 (42%), Gaps = 29/249 (11%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ P + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 61 STLVPKKLEGLSGKKIKSLSYGSGPHVLLST-------EDGVVYAWGHNGYSQLGNGTTN 113
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P I+ V EV CGS H+ L + + +G GQ+G G
Sbjct: 114 QGIAP--IQVCTNLLIKQVVEVACGSHHSMALA--------ADGEVFAWGYNNCGQVGSG 163
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P +V +V + CG + V G+V+ WG N L
Sbjct: 164 STANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYGWGYNG------NGQLGLGN 217
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
G+ ++P+ ++ H Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 218 NGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGNKN 271
Query: 354 DFFAPAIVL 362
+ +PA ++
Sbjct: 272 NLLSPAHIM 280
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|449444879|ref|XP_004140201.1| PREDICTED: uncharacterized protein LOC101207486 [Cucumis sativus]
gi|449480975|ref|XP_004156044.1| PREDICTED: uncharacterized LOC101207486 [Cucumis sativus]
Length = 1104
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ +G L+ WG+ + G + VS + P + G V +ACG
Sbjct: 365 VSCGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWIPKKINGPLEGIHVSSIACG 423
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GDR S P+ +E+
Sbjct: 424 PWHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRGSVTMPREVESLKG---LRTVRA 472
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL--PQ 249
CG +HTA ++ ++ +T+G G+ G+LGHG ++ LVP V L P
Sbjct: 473 ACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETKLVPTCVAALVDPN 532
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V CG T ++++G V++ G P N D P+ + G
Sbjct: 533 FCR---VSCGHSMTVALTTSGHVYTMG-------SPVYGQLGNPHADGKVPVRVEGK--L 580
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + ++ACGA H ++T ++++WG+G +G LG G T D +P +V
Sbjct: 581 SKSFVE--EIACGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRNSPTLV 629
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 108/246 (43%), Gaps = 43/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG H + GE + +WG + G+LG G L+PK+++ +
Sbjct: 310 VQNIACGGRHAALVTKQGEIF--------TWGEESGGRLGHGVDSDVLQPKLVDALGNTN 361
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKE 246
+ V+CG +HT +T L +T+G G G LGHG S +P+++
Sbjct: 362 ---IELVSCGEYHTCAVT--------LSGDLYTWGDGTYNFGLLGHGNEVSHWIPKKING 410
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ +++ S+ CG +HT+VV+SAG ++++G + G+ L + G P +
Sbjct: 411 PLEGIHVSSIACGPWHTAVVTSAGQLFTFG-DGTFGV-----LGHGDRGSVTMPREV--- 461
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDF 355
K V+ ACG HT V + KL++WG G G LG G
Sbjct: 462 --ESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKETK 519
Query: 356 FAPAIV 361
P V
Sbjct: 520 LVPTCV 525
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG+ D G + P+ V +V+CG VAL ++G Y
Sbjct: 498 GKLFTWGDG---DKGRLGHGDKETKLVPTCVAALVDPNFCRVSCGHSMTVALTTSGHVY- 553
Query: 151 GEDLVCYSWGANNNGQLGL----GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ G+ GQLG G R+ K+ ++F V E+ CG++H A+LT
Sbjct: 554 -------TMGSPVYGQLGNPHADGKVPVRVEGKLSKSF-------VEEIACGAYHVAVLT 599
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
R + +T+G G NG+LGHG T P V+ L + S+ CG T+ +
Sbjct: 600 SR--------TEVYTWGKGANGRLGHGDTDDRNSPTLVEALKDK-QVKSIACGTNFTAAI 650
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW---DFHGHTVV 130
C V G M++A+ +G ++ G S G + PV V
Sbjct: 533 FCRVSCGHSMTVALTTSGHVYTMG------SPVYGQLGNPHADGKVPVRVEGKLSKSFVE 586
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ACG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 587 EIACGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRNSPTLVEALKDKQ-- 636
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + K + +SMC
Sbjct: 637 -VKSIACGTNFTAAICLHKWVSGFDQSMC 664
>gi|348683616|gb|EGZ23431.1| hypothetical protein PHYSODRAFT_258036 [Phytophthora sojae]
Length = 1271
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 126/293 (43%), Gaps = 66/293 (22%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK-- 150
+W+WG P S EGG LV P V +G +V+VACG EH++ L S G+ Y
Sbjct: 469 MWVWGRPP----SLEGGTPLV--LRPKQVSLLNGQPIVQVACGGEHLLYLTSTGDVYSYG 522
Query: 151 -GEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSPWAVYEVTCGSFHTALLTHR 208
ED + N D + ++ +E + A+ ++CG+ H+ +T
Sbjct: 523 DNEDKKAAAVTIATNANSADNDYTRSISKELALEKALHRTTIAM--ISCGAQHSLAIT-- 578
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL--------------------- 247
D E +T+G GE+G+LGHG + VP +V L
Sbjct: 579 ----DAGE--LYTWGSGEDGRLGHGDMRDRAVPRKVMSLLRESVASASCGLGDNKWRDTP 632
Query: 248 ------PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
PQ + +V CG T+ + G++++WG + G G C + + D + P
Sbjct: 633 HQIVGFPQGTRISNVVCGWNFTAALDRQGNIFTWG-KTGEGQCGLGYVDK----DQVVPR 687
Query: 302 LISGNGPHGPKFQD------PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ K ++ V VACG HTV++T G +L+SWG G G L
Sbjct: 688 CVE-------KLREVAAGSAAVDVACGYTHTVVLTASG-ELYSWGLGEYGQLA 732
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 123/320 (38%), Gaps = 63/320 (19%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF 124
K H+ I + S G SLAI +AG L+ WG+ + G + P V
Sbjct: 557 KALHRTTIAMISC--GAQHSLAITDAGELYTWGSG---EDGRLGHGDMRDRAVPRKVMSL 611
Query: 125 HGHTVVKVACG------SEHVVALVSAGETYKGEDLVC--------------YSWGANNN 164
+V +CG + +V + + ++VC ++WG
Sbjct: 612 LRESVASASCGLGDNKWRDTPHQIVGFPQGTRISNVVCGWNFTAALDRQGNIFTWGKTGE 671
Query: 165 GQLGLG--DRESRLRPKIIETFNQDSPW-AVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
GQ GLG D++ ++ P+ +E + + A +V CG HT +LT ++
Sbjct: 672 GQCGLGYVDKD-QVVPRCVEKLREVAAGSAAVDVACGYTHTVVLT--------ASGELYS 722
Query: 222 FGLGENGQLGHGTTQSALV--PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+GLGE GQL S + P+Q L V CG FH+ + +++WG+
Sbjct: 723 WGLGEYGQLARVQLPSDALCAPDQ---------LTRVYCGAFHSIATTEKRVMFAWGLNS 773
Query: 280 --GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
GL A+ + E D S Q + VACG +T+ + D
Sbjct: 774 YGACGLGHTANKDKPERIDCFSS-------------QTELVVACGHKYTIALEVDPALYG 820
Query: 338 SWGRGRSGVLGTGKTIDFFA 357
++ TG +D A
Sbjct: 821 HSSSSSHAMVRTGAAVDGLA 840
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 64/135 (47%), Gaps = 10/135 (7%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK-----GLGLCPNA 287
G T L P+QV L +V V CG H ++S GDV+S+G + + + NA
Sbjct: 480 GGTPLVLRPKQVSLLNGQP-IVQVACGGEHLLYLTSTGDVYSYGDNEDKKAAAVTIATNA 538
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
+ N+ +IS L H ++CGA H++ +TD G +L++WG G G L
Sbjct: 539 NSADNDYTRSISKELALEKALHRTTI---AMISCGAQHSLAITDAG-ELYTWGSGEDGRL 594
Query: 348 GTGKTIDFFAPAIVL 362
G G D P V+
Sbjct: 595 GHGDMRDRAVPRKVM 609
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 99/257 (38%), Gaps = 51/257 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPSPVWDFH--- 125
+I +V G + A+D G ++ WG + EG G+ P V
Sbjct: 643 RISNVVCGWNFTAALDRQGNIFTWGK------TGEGQCGLGYVDKDQVVPRCVEKLREVA 696
Query: 126 -GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G V VACG H V L ++GE YSWG GQL +R++ + +
Sbjct: 697 AGSAAVDVACGYTHTVVLTASGE--------LYSWGLGEYGQL------ARVQ---LPSD 739
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+P + V CG+FH+ T ++ + + +GL G G G T + PE++
Sbjct: 740 ALCAPDQLTRVYCGAFHSIATTEKR--------VMFAWGLNSYGACGLGHTANKDKPERI 791
Query: 245 K------EL-----PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
EL +Y + VD L+ S SS V + GL + P +E
Sbjct: 792 DCFSSQTELVVACGHKYTIALEVDPALYGHSSSSSHAMVRTGAAVDGLAI-PRTQRQVSE 850
Query: 294 AGDAISPILISGNGPHG 310
+A G G G
Sbjct: 851 GSEASEDDPFFGRGSPG 867
>gi|73988984|ref|XP_542558.2| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Canis lupus familiaris]
Length = 531
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTTNQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++ AC +AHT G ++ WG RG+S VL T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKV 174
>gi|332243760|ref|XP_003271040.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Nomascus
leucogenys]
Length = 814
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 127/278 (45%), Gaps = 50/278 (17%)
Query: 80 GGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
G S + L+M WG L G S VS P+ V V AC
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGL------GSKSAVSK--PTCVKALKPEKVKLAAC 94
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H + G Y+ G NN GQLGLGD E R +I F S + +
Sbjct: 95 GRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNTFHVISFFT--SEHKIKQ 144
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
++ GS +A LT R + +G GQ+G + VP+QV + + V +
Sbjct: 145 LSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVTNVCVPQQVT-IGKPVSWI 195
Query: 255 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
S CG +H++ V++ G+++ +G E G LGL PN L G+ +P L+S P
Sbjct: 196 S--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----GNHRTPQLVS----EIP- 242
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 243 -EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 123/279 (44%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVTNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSDPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG +HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGESHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G V++ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVTNVCVPQQVT--IGKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSDPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGESHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|198415420|ref|XP_002129368.1| PREDICTED: similar to regulator of chromosome condensation (RCC1)
and BTB (POZ) domain containing protein 1 [Ciona
intestinalis]
Length = 554
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 110/248 (44%), Gaps = 36/248 (14%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
SS P + F G ++ ++ GS HV+ L G Y SWG N+ QLG G
Sbjct: 85 SSLEPRLLESFSGQKIISLSAGSGPHVLVLTQDGGVY--------SWGHNSYMQLGNGGT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
P ++ +++ V ++ CGS H+ LT E +T+G GQ+G
Sbjct: 137 SPGTSPSLL---SRNISNKVVQIACGSHHSMALT--------TEGEVYTWGYNNCGQIGS 185
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLT 290
G+T + P +V ++ + CG + V+ +G+V+SWG LG+ N + T
Sbjct: 186 GSTANQGSPRKVTACIGNKRIIDITCGQTTSLCVTDSGEVYSWGYNGNGQLGVGNNVNQT 245
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A+ ++I+ QV CG AH + +TD+G ++ WG G LG+G
Sbjct: 246 NPCRVAALQGVVIA-------------QVVCGYAHALALTDNGV-VFGWGANSYGQLGSG 291
Query: 351 KTIDFFAP 358
+ P
Sbjct: 292 NKANTCTP 299
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 83/209 (39%), Gaps = 31/209 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-V 129
K+ + G S+A+ G ++ WG NC G S + +P V G+ +
Sbjct: 152 KVVQIACGSHHSMALTTEGEVYTWGYNNC-----GQIGSGSTANQGSPRKVTACIGNKRI 206
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ + CG + + +GE Y SWG N NGQLG+G+ ++ P +
Sbjct: 207 IDITCGQTTSLCVTDSGEVY--------SWGYNGNGQLGVGNNVNQTNPCRVAAL---QG 255
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKEL 247
+ +V CG H LT FG G N GQLG G + P QV
Sbjct: 256 VVIAQVVCGYAHALALTDNGV----------VFGWGANSYGQLGSGNKANTCTPLQVATR 305
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
V ++ ++ + +G ++ WG
Sbjct: 306 IGRVVCLAATHYSHSSAARNQSGHIYMWG 334
>gi|194221881|ref|XP_001489975.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Equus
caballus]
Length = 531
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN------TYGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++ AC +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAS 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS L+P++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|410947356|ref|XP_003980415.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Felis catus]
Length = 531
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTTNQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN------TYGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++ AC +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTTNQPTPRKV 174
>gi|326914182|ref|XP_003203406.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Meleagris
gallopavo]
Length = 537
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS HV+ GE Y +WG N QLG G
Sbjct: 67 STIVPKKLEALCGKKISSLSYGSGPHVLLCTEDGEVY--------AWGHNGYSQLGNGAT 118
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ P ++ V EV CGS H+ L+ + + +G GQ+G
Sbjct: 119 NQGVTP--VQVCTNLLLKKVIEVACGSHHSMALS--------FDGDLYAWGYNNCGQVGS 168
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + P +V Q +V + CG + V + G+V+ WG N L
Sbjct: 169 GSTANQPTPRRVSNCLQDKMVVGIACGQTSSMAVVNNGEVYGWGYNG------NGQLGLG 222
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
G+ ++P ++ HG +Q+ACG AHT+ +TD+G L++WG G LGTG
Sbjct: 223 NNGNQLTPCRVA--ALHGVCI---LQIACGYAHTLALTDEGL-LYAWGANTYGQLGTGNK 276
Query: 353 IDFFAPAIVL 362
+ +P ++
Sbjct: 277 SNQLSPLQIM 286
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 88/340 (25%), Positives = 137/340 (40%), Gaps = 53/340 (15%)
Query: 73 KICSVKAG-GMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
KI S+ G G L G ++ WG+ L + +T G + V T +
Sbjct: 81 KISSLSYGSGPHVLLCTEDGEVYAWGHNGYSQLGNGATNQGVTPVQVCT-----NLLLKK 135
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL G+ Y +WG NN GQ+G G ++ P+ + QD
Sbjct: 136 VIEVACGSHHSMALSFDGDLY--------AWGYNNCGQVGSGSTANQPTPRRVSNCLQDK 187
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + + + +G NGQLG G + L P +V L
Sbjct: 188 --MVVGIACGQTSSMAVVNNGE--------VYGWGYNGNGQLGLGNNGNQLTPCRVAAL- 236
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V ++ + CG HT ++ G +++WG L + +SP+ I
Sbjct: 237 HGVCILQIACGYAHTLALTDEGLLYAWGANT------YGQLGTGNKSNQLSPLQIMMEKE 290
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
+ AC +AHT +++ WG RG+S VL T FA
Sbjct: 291 RVVEI-----AACHSAHTSAAKTQSGQVYMWGQCRGQSVVLPHLTHFACTDDVFACFATP 345
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V+W L+ E ++D L E K+ + E D K
Sbjct: 346 AVMWRLLSVE-QEDFLTVA----ESLKKEFDSPETSDLKF 380
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 71/143 (49%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G +QS +VP++++ L + + +S G H + + G+V++WG
Sbjct: 50 FVFGLNCSNCLGTGDSQSTIVPKKLEALCGKKISSLSYGSGP-HVLLCTEDGEVYAWGHN 108
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L ++P+ + N + ++VACG+ H++ ++ DG L++
Sbjct: 109 G------YSQLGNGATNQGVTPVQVCTN----LLLKKVIEVACGSHHSMALSFDG-DLYA 157
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 158 WGYNNCGQVGSGSTANQPTPRRV 180
>gi|221108961|ref|XP_002157481.1| PREDICTED: regulator of chromosome condensation-like [Hydra
magnipapillata]
Length = 441
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/328 (29%), Positives = 144/328 (43%), Gaps = 60/328 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS------PVWDFH 125
I++ AG S A+ + G ++ WG D+S + G + S + P D
Sbjct: 127 IRVVYASAGDSHSAALTDDGRVFAWG--AYRDASGQIGLTAASIGKKNEVIKIYPKGDQI 184
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG-----LGDRESR----- 175
VKV G++H V L S G + Y+ G GQLG G R R
Sbjct: 185 DDPAVKVVSGNDHTVILTSEG--------LIYTSGTGEQGQLGRIKECFGHRGGRRGLEI 236
Query: 176 -LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
L P+++ F + ++ ++ GSF T L+ + ND+ + +GL GQLG GT
Sbjct: 237 ILSPQVVR-FRKKQFFS--DIFAGSFCTFALS--RDTNDV-----YAWGLNNYGQLGSGT 286
Query: 235 TQSALVPEQVKELPQYV-----YLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNA 287
T++ PE ++ L + YL + G H+ V G +S G + LGL +A
Sbjct: 287 TENFFNPEVIQSLSEIREHANGYL-QIHGGQHHSIVADGNGKTYSIGRSEYGRLGLGKDA 345
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
T P I + ++ V++ACG A + VTD G+ L+SWG G S L
Sbjct: 346 KETS-------LPKKIDS-----LEKENVVKIACGEAVSFAVTDKGH-LYSWGLGTSLQL 392
Query: 348 GTGKTIDFFAPAIVLWPPLTEEFKQDEL 375
G G D F P++V LT QDE+
Sbjct: 393 GVGDDEDIFDPSLVQSNNLT--LAQDEV 418
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 116/294 (39%), Gaps = 43/294 (14%)
Query: 78 KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 137
K G +++L + G L + G +++ P+ + + G ++V CG
Sbjct: 36 KVGHILTLGQGDVGQLGL-------------GENVLERKRPAMIKEVEGVNFIQVTCGGM 82
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGL----GDRESRLRPKIIETFNQDSPWAVY 193
H + + GE YSWG N++G LG D E + K++ P +
Sbjct: 83 HTIGVSEHGE--------VYSWGCNDDGALGRPTEGTDGEEFIPRKVL------LPQGIR 128
Query: 194 EV--TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + G H+A LT R W +GQ+G E +K P+
Sbjct: 129 VVYASAGDSHSAALTDDGRV------FAWGAYRDASGQIGLTAASIGKKNEVIKIYPKGD 182
Query: 252 YL----VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V V G HT +++S G +++ G + L + G I++S
Sbjct: 183 QIDDPAVKVVSGNDHTVILTSEGLIYTSGTGEQGQLGRIKECFGHRGGRRGLEIILSPQV 242
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K Q + G+ T ++ D +++WG G LG+G T +FF P ++
Sbjct: 243 VRFRKKQFFSDIFAGSFCTFALSRDTNDVYAWGLNNYGQLGSGTTENFFNPEVI 296
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/178 (25%), Positives = 79/178 (44%), Gaps = 21/178 (11%)
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA--VYEVTCGSFHTALLTHRKRPND 213
Y+WG NN GQLG G E+ P++I++ ++ A ++ G H+ + +
Sbjct: 271 VYAWGLNNYGQLGSGTTENFFNPEVIQSLSEIREHANGYLQIHGGQHHSIVADGNGK--- 327
Query: 214 MLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
++ G E G+LG G + +P+++ L + +V + CG + V+ G +
Sbjct: 328 -----TYSIGRSEYGRLGLGKDAKETSLPKKIDSLEKE-NVVKIACGEAVSFAVTDKGHL 381
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLV 329
+SWG+ L L + D P L+ N QD V V+ G HT ++
Sbjct: 382 YSWGLGTSL------QLGVGDDEDIFDPSLVQSNNL--TLAQDEVLAVSAGGQHTAIL 431
>gi|4506581|ref|NP_000319.1| X-linked retinitis pigmentosa GTPase regulator isoform A [Homo
sapiens]
gi|1314871|gb|AAC50481.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
gi|2204218|emb|CAA66258.1| XLRP3 [Homo sapiens]
gi|119579845|gb|EAW59441.1| retinitis pigmentosa GTPase regulator, isoform CRA_a [Homo sapiens]
Length = 815
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 114/235 (48%), Gaps = 37/235 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V V ACG H + G Y+ G NN GQLGLGD E R
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNT 129
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+I F S + +++ GS +A LT R + +G GQ+G +
Sbjct: 130 FHVISFFT--SEHKIKQLSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSN 179
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
VP+QV + + V +S CG +H++ V++ G+++ +G E G LGL PN L G
Sbjct: 180 VCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----G 230
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P L+S P + +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 231 NHRTPQLVS----EIP--EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|62898714|dbj|BAD97211.1| retinitis pigmentosa GTPase regulator variant [Homo sapiens]
Length = 815
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 114/235 (48%), Gaps = 37/235 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V V ACG H + G Y+ G NN GQLGLGD E R
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNT 129
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+I F S + +++ GS +A LT R + +G GQ+G +
Sbjct: 130 FHVISFFT--SEHKIKQLSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSN 179
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
VP+QV + + V +S CG +H++ V++ G+++ +G E G LGL PN L G
Sbjct: 180 VCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----G 230
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P L+S P + +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 231 NHRTPQLVS----EIP--EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|66817532|ref|XP_642619.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
gi|60470703|gb|EAL68677.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium discoideum AX4]
Length = 849
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 118/276 (42%), Gaps = 54/276 (19%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGH 127
P ++ V G S A+ +G L+ WG + +G L + + TP V
Sbjct: 211 PEEVVDVSGGWAFSAAVTKSGRLYTWG------FNEKGQLGLGNRWFHSTPQLVKTLIDV 264
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V V CG +H+ A+ GE YSWG GQLG G+ +S L PK I+ F +
Sbjct: 265 NIVSVVCGRQHICAITDQGE--------VYSWGLGVFGQLGHGNVKSYLHPKKIQQFVEL 316
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-------- 239
+ + +V CGS T + + ++ + + FG GE GQLG L
Sbjct: 317 NE-RIAQVACGSNFTMVRS--------VQGLLYAFGHGEYGQLGSTEETQHLDFGGRDNH 367
Query: 240 ----VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNE 293
+P VK L + + +V CG HT VV+ +V W WG LGL N+
Sbjct: 368 FKYSIPIVVKSL-ETKKIKNVACGHLHTIVVTDENEVYQWGWGSSGALGLG-------NK 419
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
+ ++ S +G ++ + G HT++V
Sbjct: 420 RFQLVPQLITSLSG------EEIASITAGEKHTIVV 449
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 98/212 (46%), Gaps = 24/212 (11%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N GQLGLG+R P++++T + V CG H +T D E
Sbjct: 234 YTWGFNEKGQLGLGNRWFHSTPQLVKTL---IDVNIVSVVCGRQHICAIT------DQGE 284
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCGLFHTSVVSSAGDVWSW 275
W GLG GQLGHG +S L P+++++ + + V CG T V S G ++++
Sbjct: 285 VYSW--GLGVFGQLGHGNVKSYLHPKKIQQFVELNERIAQVACGSNFTMVRSVQGLLYAF 342
Query: 276 GM-EKG-LGLCPNASLT----RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G E G LG R+ PI++ K VACG HT++V
Sbjct: 343 GHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIK-----NVACGHLHTIVV 397
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
TD+ +++ WG G SG LG G P ++
Sbjct: 398 TDEN-EVYQWGWGSSGALGLGNKRFQLVPQLI 428
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 14/125 (11%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK- 279
+ G +NGQLGH + + L P ++ L + +V G H+ VS GDV+SWG K
Sbjct: 5 SVGQSKNGQLGHDSIKECLEPTVIEGLLGKRIIQTV-SGEAHSLAVSRFGDVYSWGRSKE 63
Query: 280 ---GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
G+G S ++ P LI + + ++VACG H++ +TD G K+
Sbjct: 64 GQLGIGQGYGGS---DKVMFVAKPTLIK-----SLQHERIIKVACGNFHSLALTDMG-KV 114
Query: 337 WSWGR 341
+ WG+
Sbjct: 115 YEWGQ 119
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 65/276 (23%), Positives = 108/276 (39%), Gaps = 54/276 (19%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G S+ P+ + G +++ G H +A+ G+ Y SWG + GQL
Sbjct: 15 GHDSIKECLEPTVIEGLLGKRIIQTVSGEAHSLAVSRFGDVY--------SWGRSKEGQL 66
Query: 168 GLG------DRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
G+G D+ + +P +I++ + + +V CG+FH+ LT DM + W
Sbjct: 67 GIGQGYGGSDKVMFVAKPTLIKSLQHER---IIKVACGNFHSLALT------DMGKVYEW 117
Query: 221 TFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
GQL +QS+L + L + L S ++ ++ + G +K
Sbjct: 118 -------GQLHRLDESQSSLDIQSTNGLIEMPRLSS-------QRIIEASVSQYLSGEKK 163
Query: 280 GL----GLCPNASLTRNEAGDAISP------ILISGNGPHGPKFQD----PVQVACGAAH 325
G P EA ++ +I N + QD V V+ G A
Sbjct: 164 AYDANGGTKPKDDDEDKEASNSAQSKSKHLGKIIDLNQTIPMQIQDIPEEVVDVSGGWAF 223
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ VT G +L++WG G LG G P +V
Sbjct: 224 SAAVTKSG-RLYTWGFNEKGQLGLGNRWFHSTPQLV 258
Score = 42.4 bits (98), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 72/183 (39%), Gaps = 37/183 (20%)
Query: 33 GQLGFSGSNS-LVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG S L P I+QF+ + +I V G ++ G
Sbjct: 294 GQLGHGNVKSYLHPKKIQQFVELNE----------------RIAQVACGSNFTMVRSVQG 337
Query: 92 ALWMWGNCPLPD-SSTE-------GGFSLVSSFT-PSPVWDFHGHTVVKVACGSEHVVAL 142
L+ +G+ STE GG ++ P V + VACG H + +
Sbjct: 338 LLYAFGHGEYGQLGSTEETQHLDFGGRDNHFKYSIPIVVKSLETKKIKNVACGHLHTIVV 397
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
E Y+ WG ++G LGLG++ +L P++I + S + +T G HT
Sbjct: 398 TDENEVYQ--------WGWGSSGALGLGNKRFQLVPQLITSL---SGEEIASITAGEKHT 446
Query: 203 ALL 205
++
Sbjct: 447 IVV 449
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 58/126 (46%), Gaps = 19/126 (15%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
S G + NGQLG + L P +IE + + G H+ ++ R D+
Sbjct: 5 SVGQSKNGQLGHDSIKECLEPTVIEGL---LGKRIIQTVSGEAHSLAVS---RFGDV--- 55
Query: 218 MCWTFGLGENGQLG----HGTTQSALV---PEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+++G + GQLG +G + + P +K L Q+ ++ V CG FH+ ++ G
Sbjct: 56 --YSWGRSKEGQLGIGQGYGGSDKVMFVAKPTLIKSL-QHERIIKVACGNFHSLALTDMG 112
Query: 271 DVWSWG 276
V+ WG
Sbjct: 113 KVYEWG 118
>gi|63995563|gb|AAY41038.1| unknown [Homo sapiens]
Length = 382
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 140/300 (46%), Gaps = 48/300 (16%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFH 125
A I V G SLA+ + G L+ WG + ++G L+++ P + +
Sbjct: 82 ADQHIIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLN 135
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETF 184
T+++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + +
Sbjct: 136 QQTILQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL 187
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ P A +V G H+ L+ L + +G+ GQLG + P V
Sbjct: 188 -EGIPLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHV 236
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---I 301
K L + +V + CG HT+V++ +G V+++G G C L + D ++P +
Sbjct: 237 K-LLRTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVL 289
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 290 ELMGS--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLGH-EREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ L + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSSGL---IYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|334330728|ref|XP_001378629.2| PREDICTED: RCC1 and BTB domain-containing protein 1 [Monodelphis
domestica]
Length = 531
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED + Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGMVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVIEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +VS+ CG + V G+
Sbjct: 145 ---ADGEVYAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVSIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P ++ H +Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPCRVA--ALHSVCV---LQIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKSNLLSPAQIM 280
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 98/224 (43%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API++C+ V G S+A+ G ++ WG NC G S + TP
Sbjct: 117 APIQVCTNLLIKQVIEVACGSHHSMALAADGEVYAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHIKRVVSIACGQTSSMAVLDNGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G +
Sbjct: 224 PCRVAALHS---VCVLQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGNKSN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPAQIMVEKERVVEIAA-CHSAHTSAAKTQGGHVYMWGQCRG 315
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 87/329 (26%), Positives = 132/329 (40%), Gaps = 48/329 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GMVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL + GE Y +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VIEVACGSHHSMALAADGEVY--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVSIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPCRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V ++ + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVLQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKSNLLSPAQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S +L T FA
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKD 388
V W L+ E + L E + D
Sbjct: 340 AVTWRLLSVEHEDFLTVAESLKKEFDSPD 368
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS +VP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNCSNCLGTGDNQSTIVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGMVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + ++VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVIEVACGSHHSMALAADG-EVYA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|195449389|ref|XP_002072053.1| GK22640 [Drosophila willistoni]
gi|194168138|gb|EDW83039.1| GK22640 [Drosophila willistoni]
Length = 1261
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/302 (27%), Positives = 123/302 (40%), Gaps = 52/302 (17%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG +NS VP +++ PD K P+ + + G SLA+ N G
Sbjct: 106 GQLG-QTTNSRVPTMVK------VPD----------KKPLFV-QIACGNEHSLALTNDGT 147
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
++ WG+ ++ + P + HG + +ACG H + + Y
Sbjct: 148 IYSWGSNRYGQLGMSEPENMSNCHFPMHLTSIHGIPIATIACGGNHCFLISKSSAVY--- 204
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
WG NN GQLGL D R P + T P V V CG + LTH+
Sbjct: 205 -----GWGRNNRGQLGLNDLSDRPYPTELTTLR---PCGVRYVACGDEFSVFLTHK---- 252
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGD 271
+T G G +GQLGHG +AL P +V +L + + V C +T + V S G
Sbjct: 253 ----GALFTCGDGTHGQLGHGNLSNALAPFKVMKL-RDKPVTQVACAKHYTLAFVPSIGQ 307
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV---QVACGAAHTVL 328
++ +G + P G ISP L + + F D V Q+ G +V+
Sbjct: 308 LYGFGQLGKIYTLPGKI-----NGPWISPTLTANSA-----FNDAVIVNQIFSGGLKSVV 357
Query: 329 VT 330
T
Sbjct: 358 TT 359
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 102/237 (43%), Gaps = 36/237 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACGS H + L +G V SWG N+ GQLG SR+ P +++ D
Sbjct: 78 VSAIACGSSHSLVLTKSG--------VVMSWGVNDCGQLG-QTTNSRV-PTMVKV--PDK 125
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ---SALVPEQVK 245
++ CG+ H+ LT+ + +++G GQLG + + P +
Sbjct: 126 KPLFVQIACGNEHSLALTN--------DGTIYSWGSNRYGQLGMSEPENMSNCHFPMHLT 177
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ + + ++ CG H ++S + V+ WG L N+ D P ++
Sbjct: 178 SI-HGIPIATIACGGNHCFLISKSSAVYGWGRNN------RGQLGLNDLSDRPYPTELTT 230
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
P G ++ VACG +V +T G L++ G G G LG G + AP V+
Sbjct: 231 LRPCGVRY-----VACGDEFSVFLTHKG-ALFTCGDGTHGQLGHGNLSNALAPFKVM 281
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 187 DSPWA----VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
D+PW + ++ G +T LT + + + +GQ+ + +S L P
Sbjct: 18 DAPWKGVEQLRDIAFGDRYTLFLTAKGK----------VYECETHGQVHNTRKRSRLSPF 67
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
++ Q + + ++ CG H+ V++ +G V SWG+ C T N + +
Sbjct: 68 RLVAGLQDIEVSAIACGSSHSLVLTKSGVVMSWGVND----CGQLGQTTNSRVPTMVKV- 122
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P F VQ+ACG H++ +T+DG ++SWG R G LG
Sbjct: 123 ----PDKKPLF---VQIACGNEHSLALTNDG-TIYSWGSNRYGQLG 160
>gi|255544003|ref|XP_002513064.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223548075|gb|EEF49567.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1096
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 128/294 (43%), Gaps = 38/294 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVK 131
V G S A+ +G L+ WG NC L E S++ P + G V
Sbjct: 362 VACGEYHSCAVTLSGDLYTWGGSSHNCGLLGYRNEA-----SNWVPKKLNGPLEGIHVAA 416
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+CG H + S+G+ +++G G LG GDR S P+ +E+
Sbjct: 417 VSCGPWHTAVVTSSGQ--------LFTFGDGTFGVLGHGDRRSVSTPREVESLKG---LR 465
Query: 192 VYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
CG +HTA ++ ++ +T+G G+ G+LGHG +S LVP V L
Sbjct: 466 TVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVPTCVAAL 525
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ + V CG T +++ G V++ G P N D P+ + G
Sbjct: 526 VEPNF-CQVACGHSMTVALTTTGHVYTMG-------SPVYGQLGNPQADGKLPVRVEGK- 576
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + ++ CGA H ++T ++++WG+G +G LG G T D +P IV
Sbjct: 577 -LSKNFVE--ELDCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRSSPTIV 626
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 112/271 (41%), Gaps = 48/271 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + +V G + + ++G L+ +G +G F ++ S TP V
Sbjct: 412 IHVAAVSCGPWHTAVVTSSGQLFTFG---------DGTFGVLGHGDRRSVSTPREVESLK 462
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG GD+ESRL P
Sbjct: 463 GLRTVRAACGVWHTAAVV---EVMVGSSSSSNCSSGKLFTWGDGDKGRLGHGDKESRLVP 519
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT +T G GQLG+
Sbjct: 520 TCVAALVEPN---FCQVACGHSMTVALT--------TTGHVYTMGSPVYGQLGNPQADGK 568
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
L P +V+ ++ +DCG +H +V++S +V++WG KG N L + D
Sbjct: 569 L-PVRVEGKLSKNFVEELDCGAYHVAVLTSRTEVYTWG--KGA----NGRLGHGDTDDRS 621
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
SP ++ K + V CG + T +
Sbjct: 622 SPTIV-----EALKDKQVKSVVCGTSFTAAI 647
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 43/260 (16%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
SF P + V +ACG H + GE + SWG G+LG G
Sbjct: 293 SFVPKALESAVLLDVQTIACGRRHAALVTKQGEVF--------SWGEELGGRLGHGVDSD 344
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGH 232
L PK+++ + V V CG +H+ +T L +T+G + G LG+
Sbjct: 345 VLHPKLVDGLKNTN---VELVACGEYHSCAVT--------LSGDLYTWGGSSHNCGLLGY 393
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
S VP+++ + +++ +V CG +HT+VV+S+G ++++G + G+ L
Sbjct: 394 RNEASNWVPKKLNGPLEGIHVAAVSCGPWHTAVVTSSGQLFTFG-DGTFGV-----LGHG 447
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGR 341
+ +P + K V+ ACG HT V + KL++WG
Sbjct: 448 DRRSVSTPREV-----ESLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWGD 502
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G P V
Sbjct: 503 GDKGRLGHGDKESRLVPTCV 522
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 61/149 (40%), Gaps = 20/149 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW---DFHGHTVV 130
C V G M++A+ G ++ G S G + PV + V
Sbjct: 530 FCQVACGHSMTVALTTTGHVYTMG------SPVYGQLGNPQADGKLPVRVEGKLSKNFVE 583
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ CG+ HV L S E Y +WG NG+LG GD + R P I+E
Sbjct: 584 ELDCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRSSPTIVEALKDKQ-- 633
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V V CG+ TA + K + + +SMC
Sbjct: 634 -VKSVVCGTSFTAAICLHKWVSGIDQSMC 661
>gi|344284964|ref|XP_003414234.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Loxodonta
africana]
Length = 1018
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/233 (30%), Positives = 103/233 (44%), Gaps = 29/233 (12%)
Query: 65 KTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVW 122
K A IKI V G SLA+ G ++ WGN +S + G +S +P V
Sbjct: 119 KVKALAGIKIIQVSCGHYHSLALSQDGQVFSWGN----NSHGQLGLGKEFLSQESPQRVK 174
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
G + +VA G H AL +G + + WG+NN GQL L ++
Sbjct: 175 SLEGIPLAQVAAGGAHSFALSLSGTS--------FGWGSNNAGQLALSGNNVPVQSYKPR 226
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
+ V ++CGS HTA+LT + +TFG +GQLGHG T P+
Sbjct: 227 SIGALKELGVVYISCGSEHTAVLTQ--------DGKVFTFGDNSSGQLGHGPTAEKRGPQ 278
Query: 243 QVKELPQYVYLVSVDCGLFHTSV-VSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
V+ + V +DCG +HT V V + V S+G G S TR++A
Sbjct: 279 LVEGIDGLV--SQIDCGSYHTLVYVYTTRQVISFGR----GPSDTTSSTRSDA 325
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 118/285 (41%), Gaps = 73/285 (25%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII---E 182
G + + A G H + L+S G ++ G N+ GQLG R RP +I E
Sbjct: 20 GAELRQAASGERHSLLLLSDG--------TVHACGDNSCGQLGRRGVPHRKRPGLIQALE 71
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA-LVP 241
T N D ++CG H+ + H+ R + +G G GQLG G + P
Sbjct: 72 TLNVDL------LSCGKEHSLAVCHKGR--------VFAWGAGSEGQLGIGEFKELNFTP 117
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAG 295
+VK L + ++ V CG +H+ +S G V+SWG + GLG S R ++
Sbjct: 118 MKVKALAG-IKIIQVSCGHYHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQRVKSL 176
Query: 296 DAISPILISGNGPH-------GPKF---------------QDPVQ--------------- 318
+ I ++ G H G F PVQ
Sbjct: 177 EGIPLAQVAAGGAHSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGV 236
Query: 319 --VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++CG+ HT ++T DG K++++G SG LG G T + P +V
Sbjct: 237 VYISCGSEHTAVLTQDG-KVFTFGDNSSGQLGHGPTAEKRGPQLV 280
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 128/293 (43%), Gaps = 70/293 (23%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKVACG 135
G SLA+ + G ++ WG + +EG + +FTP V G +++V+CG
Sbjct: 81 GKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKELNFTPMKVKALAGIKIIQVSCG 134
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG----DRESRLRPKIIETFNQDSPWA 191
H +AL G+ +SWG N++GQLGLG +ES R K +E P A
Sbjct: 135 HYHSLALSQDGQV--------FSWGNNSHGQLGLGKEFLSQESPQRVKSLEGI----PLA 182
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL---GHGTTQSALVPEQVKELP 248
+V G H+ L+ L + +G GQL G+ + P + L
Sbjct: 183 --QVAAGGAHSFALS--------LSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALK 232
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + +V + CG HT+V++ G V+++G N +G G+GP
Sbjct: 233 E-LGVVYISCGSEHTAVLTQDGKVFTFG--------------DNSSGQL-------GHGP 270
Query: 309 ----HGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
GP+ + + Q+ CG+ HT++ ++ S+GRG S + ++
Sbjct: 271 TAEKRGPQLVEGIDGLVSQIDCGSYHTLVYVYTTRQVISFGRGPSDTTSSTRS 323
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 101/233 (43%), Gaps = 28/233 (12%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVI-EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGM 82
Y SL DGQ+ G+NS + ++FL+ +P + I + V AGG
Sbjct: 136 YHSLALSQDGQVFSWGNNSHGQLGLGKEFLSQESPQ------RVKSLEGIPLAQVAAGGA 189
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
S A+ +G + WG+ + G V S+ P + VV ++CGSEH L
Sbjct: 190 HSFALSLSGTSFGWGSNNAGQLALSGNNVPVQSYKPRSIGALKELGVVYISCGSEHTAVL 249
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ +++G N++GQLG G + P+++E + V ++ CGS+HT
Sbjct: 250 TQDGKV--------FTFGDNSSGQLGHGPTAEKRGPQLVEGID----GLVSQIDCGSYHT 297
Query: 203 ALLTHRKR--------PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ + R P+D S + L +N + + LV QVK +
Sbjct: 298 LVYVYTTRQVISFGRGPSDTTSS-TRSDALTKNSDVSCLISADDLVNVQVKHI 349
>gi|221113828|ref|XP_002154529.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Hydra magnipapillata]
Length = 364
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 95/209 (45%), Gaps = 29/209 (13%)
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
LA+ ++G L+ WG+ G S PV + V++VACGS H +AL
Sbjct: 88 LAVTDSGELYSWGH------GGYGQLGHTSEEKSKPVLVYMQKKVIQVACGSYHSIALTE 141
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
GE Y+WG+NN GQLGLG ++ PK + + V+CG T +
Sbjct: 142 DGEV--------YAWGSNNCGQLGLGISNNQATPKRVSLIPSKK---IVSVSCGQSFTVM 190
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
LT + +++G NGQLG + L P +V ++ + CG+ H
Sbjct: 191 LT--------TDGELYSWGYNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVL 242
Query: 265 VVSSAGDVWSWGMEK----GLGLCPNASL 289
V++ G+++SWG GLG N S+
Sbjct: 243 VLTDIGELYSWGANSYGQLGLGTTHNTSV 271
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 121/296 (40%), Gaps = 76/296 (25%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ SF PS + V G+E ++ L + Y+ G N NG LG+GD
Sbjct: 9 ILSFIPSSLATKVKKAFVFGGAGNEALLTLTNGD---------VYALGFNGNGCLGVGDG 59
Query: 173 ESRLRPKIIETFNQ-----------------------------------------DSPWA 191
S L PKIIE Q P
Sbjct: 60 SSTLEPKIIEQLCQKDIVQLAYGMGPHVLAVTDSGELYSWGHGGYGQLGHTSEEKSKPVL 119
Query: 192 VY------EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
VY +V CGS+H+ LT + + +G GQLG G + + P++V
Sbjct: 120 VYMQKKVIQVACGSYHSIALTE--------DGEVYAWGSNNCGQLGLGISNNQATPKRVS 171
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+P +VSV CG T ++++ G+++SWG N L + + P+ ++G
Sbjct: 172 LIPSK-KIVSVSCGQSFTVMLTTDGELYSWGYNG------NGQLGIENNTNQLQPVRVTG 224
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ KF + ++ CG AH +++TD G +L+SWG G LG G T + P ++
Sbjct: 225 S--LFGKFIE--KIVCGMAHVLVLTDIG-ELYSWGANSYGQLGLGTTHNTSVPTLI 275
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 68/165 (41%), Gaps = 18/165 (10%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
Y S+ DG++ GSN+ L +G ++ + + KI SV G
Sbjct: 134 YHSIALTEDGEVYAWGSNNCGQ------LGLGISNNQATPKRVSLIPSKKIVSVSCGQSF 187
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVKVACGSEHVVAL 142
++ + G L+ WG + G + + P V G + K+ CG HV+ L
Sbjct: 188 TVMLTTDGELYSWG---YNGNGQLGIENNTNQLQPVRVTGSLFGKFIEKIVCGMAHVLVL 244
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
GE YSWGAN+ GQLGLG + P +I T D
Sbjct: 245 TDIGE--------LYSWGANSYGQLGLGTTHNTSVPTLINTTTDD 281
>gi|355569557|gb|EHH25458.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca mulatta]
Length = 1020
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLNVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-T 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEV 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ I G + ++CG HT ++ DG K++++G SG LG T +
Sbjct: 223 QSNKPLSIGALKNLG-----VIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVWDFHGHTV 129
IKI V G SLA+ ++ WG +S + G + S +P V G +
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK----NSHGQLGLGKEVPSQASPQRVRSLEGIPL 183
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKN 235
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++CG HTA+L + +TFG +GQLG+ T P+ V+ +
Sbjct: 236 LGVIYISCGDEHTAVLIQ--------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287
Query: 250 YVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 288 LV--SQIDCGSYHTLAYVHTTGQVISFG 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P +
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + ++ + CG HT+V+ G V+++G LG P
Sbjct: 232 AL-KNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317
>gi|444731984|gb|ELW72311.1| RCC1 and BTB domain-containing protein 1 [Tupaia chinensis]
Length = 531
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVTWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|384939244|gb|AFI33227.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLNVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-T 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEV 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ I G + ++CG HT ++ DG K++++G SG LG T +
Sbjct: 223 QSNKPLSIGALKNLG-----VIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVWDFHGHTV 129
IKI V G SLA+ ++ WG +S + G + S +P V G +
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK----NSHGQLGLGKEVPSQASPQRVRSLEGIPL 183
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKN 235
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++CG HTA+L + +TFG +GQLG+ T P+ V+ +
Sbjct: 236 LGVIYISCGDEHTAVLIQ--------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287
Query: 250 YVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 288 LV--SQIDCGSYHTLAYVHTTGQVISFG 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P +
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + ++ + CG HT+V+ G V+++G LG P
Sbjct: 232 AL-KNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317
>gi|297694075|ref|XP_002824322.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pongo abelii]
gi|332241941|ref|XP_003270143.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Nomascus
leucogenys]
Length = 531
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 91/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|395859036|ref|XP_003801852.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 1
[Otolemur garnettii]
Length = 531
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 136/340 (40%), Gaps = 53/340 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKNNLLSPAHI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S VL T FA
Sbjct: 280 MVEKERIVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFSCTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 340 AVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|387540886|gb|AFJ71070.1| putative E3 ubiquitin-protein ligase HERC6 isoform 1 [Macaca
mulatta]
Length = 1020
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLNVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-T 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEV 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ I G + ++CG HT ++ DG K++++G SG LG T +
Sbjct: 223 QSNKPLSIGALKNLG-----VIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVWDFHGHTV 129
IKI V G SLA+ ++ WG +S + G + S +P V G +
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK----NSHGQLGLGKEVPSQASPQRVRSLEGIPL 183
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKN 235
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++CG HTA+L + +TFG +GQLG+ T P+ V+ +
Sbjct: 236 LGVIYISCGDEHTAVLIQ--------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287
Query: 250 YVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 288 LV--SQIDCGSYHTLAYVHTTGQVISFG 313
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P +
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + ++ + CG HT+V+ G V+++G LG P
Sbjct: 232 AL-KNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317
>gi|357460713|ref|XP_003600638.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
gi|355489686|gb|AES70889.1| RCC1 and BTB domain-containing protein [Medicago truncatula]
Length = 1032
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 128/294 (43%), Gaps = 30/294 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I++ +V G + A+ ++G ++ WGN + G T G ++
Sbjct: 356 IRVKNVACGEYHTCALTDSGEVYAWGNDVSCSDLVDEGRIRSQWLTHKLSLPVEGISISS 415
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG H + S G + ++G G LG G S PK +E+
Sbjct: 416 IACGEWHTAIVSSCGRLF--------TYGDGTFGVLGHGSYHSFSSPKEVESLK---GLC 464
Query: 192 VYEVTCGSFHTALL----THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V CG++HTA + R + N + +T+G + G+LGH + LVP V +L
Sbjct: 465 VRSVACGTWHTAAIIEISAERFKYNTSTGKL-FTWGDADEGRLGHADNVNKLVPTCVSQL 523
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Y + V V CG T +++ G V++ G K G N + +++ G
Sbjct: 524 VDYDF-VQVSCGRMMTLALTNMGKVFAMGSAK-YGQLGNPHVKDR-------AVVVEGM- 573
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K + ++CG+ H ++T G +++WG+G +G LG G T + + P V
Sbjct: 574 ---LKQEYVKMISCGSYHVAVLTSSG-SVYTWGKGENGELGLGDTENRYTPCFV 623
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 74/182 (40%), Gaps = 41/182 (22%)
Query: 32 DGQLGFSGS-NSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+G+LG + + N LVP + Q + V G MM+LA+ N
Sbjct: 503 EGRLGHADNVNKLVPTCVSQLV------------------DYDFVQVSCGRMMTLALTNM 544
Query: 91 GALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ G+ L + + +V V ++CGS HV L S+G
Sbjct: 545 GKVFAMGSAKYGQLGNPHVKDRAVVVEGM-------LKQEYVKMISCGSYHVAVLTSSGS 597
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLT 206
Y +WG NG+LGLGD E+R P +E V +TCG SF A+
Sbjct: 598 VY--------TWGKGENGELGLGDTENRYTPCFVEALRDRQ---VDTITCGPSFTVAICL 646
Query: 207 HR 208
H+
Sbjct: 647 HK 648
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+ G L+ WG+ D G V+ P+ V + V+V+CG +AL + G+
Sbjct: 491 STGKLFTWGD---ADEGRLGHADNVNKLVPTCVSQLVDYDFVQVSCGRMMTLALTNMGKV 547
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ + G+ GQLG + + R ++E + V ++CGS+H A+LT
Sbjct: 548 F--------AMGSAKYGQLG--NPHVKDRAVVVEGMLKQE--YVKMISCGSYHVAVLTS- 594
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+T+G GENG+LG G T++ P V+ L
Sbjct: 595 -------SGSVYTWGKGENGELGLGDTENRYTPCFVEAL 626
>gi|125550526|gb|EAY96235.1| hypothetical protein OsI_18130 [Oryza sativa Indica Group]
Length = 994
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 44/290 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG +S G +++ S P P+ V V CG H
Sbjct: 109 DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 168
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ G+ + +WG ++ G+LG G RE + P+++E+ + V V CG FH
Sbjct: 169 VTRNGDVF--------TWGEDSGGRLGHGTREDSVHPRLVESL---AACNVDFVACGEFH 217
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHGT +P+++ + + V CG +
Sbjct: 218 TCAVT------TTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTW 271
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + +LT + +SG + VAC
Sbjct: 272 HTALITSMGQLFTFG-DGSFGVLGHGNLTSISCPKEVES--LSG--------LKTIAVAC 320
Query: 322 GAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 321 GVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV 370
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 150/375 (40%), Gaps = 85/375 (22%)
Query: 49 EQFLTIGAPDSLEDDSKTNHKAP--------IKICSVKAGGMMSLAIDNAGALWMWGNCP 100
E + +G+ + KT+ P + + V G + + G ++ WG
Sbjct: 123 ENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAALVTRNGDVFTWGE-- 180
Query: 101 LPDSSTEGGF-SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSW 159
DS G + S P V V VACG H A+ + GE Y D
Sbjct: 181 --DSGGRLGHGTREDSVHPRLVESLAACNVDFVACGEFHTCAVTTTGELYTWGD------ 232
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G +N G LG G PK I P A V+CG++HTAL+T
Sbjct: 233 GTHNVGLLGHGTDAGHWIPKRISGALDGLPVAY--VSCGTWHTALITSM--------GQL 282
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-----------S 268
+TFG G G LGHG S P++V+ L + ++V CG++HT+ + S
Sbjct: 283 FTFGDGSFGVLGHGNLTSISCPKEVESLSG-LKTIAVACGVWHTAAIVEVIVTHSSSSVS 341
Query: 269 AGDVWSWG---------MEKGLGLCPN--ASLT-----RNEAGDAIS-------PILISG 305
AG +++WG +K L P ASL R G +++ +L G
Sbjct: 342 AGKLFTWGDGDKHRLGHGDKESRLKPTCVASLIDYDFYRVACGHSLTVCLTTSGKVLSMG 401
Query: 306 NGPHGPKFQDP-------------------VQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
N +G + +P +QVACG+ H ++T ++++WG+G +G
Sbjct: 402 NSVYG-QLGNPNSDGRLPCLVEDRIAGEHVLQVACGSYHVAVLTGRS-EVFTWGKGANGR 459
Query: 347 LGTGKTIDFFAPAIV 361
LG G D P V
Sbjct: 460 LGHGDIEDRKVPTQV 474
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + V G + I + G L+ +G+ G +L S P V G +
Sbjct: 261 LPVAYVSCGTWHTALITSMGQLFTFGDGSF---GVLGHGNLTSISCPKEVESLSGLKTIA 317
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V T+ + ++WG + +LG GD+ESRL+P + +
Sbjct: 318 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID-- 375
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ Y V CG T LT + M S+ GQLG+ + L P V++
Sbjct: 376 -YDFYRVACGHSLTVCLTTSGKVLSMGNSV--------YGQLGNPNSDGRL-PCLVEDRI 425
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+++ V CG +H +V++ +V++WG KG N L + D P +
Sbjct: 426 AGEHVLQVACGSYHVAVLTGRSEVFTWG--KG----ANGRLGHGDIEDRKVPTQVE---- 475
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + +ACGA T +
Sbjct: 476 -ALKDRAVRHIACGANFTAAI 495
>gi|13699242|gb|AAK38372.1|AF334406_1 CLLL7 protein [Homo sapiens]
gi|14275565|emb|CAC40027.1| guanine nucleotide exchange factor [Homo sapiens]
gi|21756194|dbj|BAC04833.1| unnamed protein product [Homo sapiens]
gi|119629234|gb|EAX08829.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Homo sapiens]
Length = 531
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/290 (25%), Positives = 122/290 (42%), Gaps = 32/290 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+C +L + + ++++G L S+ G S+ P + G + +
Sbjct: 23 KVCVFGTSASEALYVTDNDEVFVFG---LNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSL 79
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ GS V L + ED V Y+WG N QLG G + P ++ V
Sbjct: 80 SYGSGPHVLLST-------EDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQV 130
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
EV CGS H+ L + + +G GQ+G G+T + P +V
Sbjct: 131 VEVACGSHHSMALA--------ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKR 182
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V + CG + V G+V+ WG N L G+ ++P+ ++ H
Sbjct: 183 VVGIACGQTSSMAVLDNGEVYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVC 234
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q+ CG AHT+ +TD+G L++WG G LGTG + +PA ++
Sbjct: 235 VN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|344292741|ref|XP_003418084.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Loxodonta africana]
Length = 1100
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/260 (27%), Positives = 117/260 (45%), Gaps = 38/260 (14%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+ P V V ACG H + G Y+ G NN GQLGLGD E R
Sbjct: 72 YRPICVKALKSEKVKLAACGRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEER 123
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+I F S + +++ G+ +A LT + + +G GQ+G +
Sbjct: 124 NSFHLISFFT--SRHKIKQLSAGANISAALTE--------DGELFMWGDNSEGQIGLNSI 173
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
+ VP QV + + + +S CG +H++ V+ G ++++G + C L +
Sbjct: 174 SNVYVPRQVT-VGKPISWIS--CGYYHSAFVTMEGKLYTFGEPE----CGKLGLPSEQLI 226
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P L+SG + +QVACG HTV++T+ ++++G+GR G LG G I F
Sbjct: 227 NHRKPQLVSGIS------EKVIQVACGGGHTVVLTEKA--VYTFGQGRFGQLGLGSFI-F 277
Query: 356 FAPAIVLWPPLTEEFKQDEL 375
AP P + E K ++
Sbjct: 278 QAPE----PAILEHVKDQKI 293
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 73/279 (26%), Positives = 125/279 (44%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F L+S FT H + +++
Sbjct: 96 LVSTEGGNVYATGGNNEGQLG------LGDTEERNSFHLISFFTSR-------HKIKQLS 142
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ AL GE + WG N+ GQ+GL + P+ + T + W
Sbjct: 143 AGANISAALTEDGE--------LFMWGDNSEGQIGLNSISNVYVPRQV-TVGKPISW--- 190
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ--SALVPEQVKELPQYV 251
++CG +H+A +T +E +TFG E G+LG + Q + P+ V + + V
Sbjct: 191 -ISCGYYHSAFVT--------MEGKLYTFGEPECGKLGLPSEQLINHRKPQLVSGISEKV 241
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT V++ V+++G + L + + + A P ++
Sbjct: 242 --IQVACGGGHTVVLTEKA-VYTFGQGRFGQLGLGSFIFQ-----APEPAIL-----EHV 288
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
K Q ++CG HT L+TD G+ ++++G GR G LG G
Sbjct: 289 KDQKIRHISCGENHTALITDVGH-MYTFGDGRHGKLGLG 326
>gi|390338528|ref|XP_782246.3| PREDICTED: RCC1 and BTB domain-containing protein 1
[Strongylocentrotus purpuratus]
Length = 536
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 112/253 (44%), Gaps = 35/253 (13%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
++SS TP + + +A GS HVVA GE Y SWG N QLG G
Sbjct: 63 VMSSLTPRKIEGLCKKGMFALAFGSGPHVVAATENGEIY--------SWGHNGYCQLGNG 114
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
L P I T N S + ++ CGS H+ +LT R E W G GQ+
Sbjct: 115 TTNQGLLPHRI-TGNLGS-CKISQIACGSHHSLVLTDRG------EVFAW--GYNNCGQV 164
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNAS 288
G G T + P +V + +VS+ CG + V +G+V+ WG LGL N +
Sbjct: 165 GSGATANISTPRKVVSVLGGKRVVSIACGQTSSLAVVDSGEVYGWGYNGNGQLGLGNNVN 224
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+++ ++IS Q ACG AH++ ++D+G +++WG G LG
Sbjct: 225 QPSPCKVSSLNGLIIS-------------QAACGYAHSMALSDEG-NIYTWGANSYGQLG 270
Query: 349 TGKTIDFFAPAIV 361
TG + A +
Sbjct: 271 TGNKANLCGAAKI 283
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 105/240 (43%), Gaps = 41/240 (17%)
Query: 130 VKVACGSEHVVALVSAGE--TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VK+AC SAG Y +D +++G N+N LGLGD S L P+ IE +
Sbjct: 25 VKLAC------VFGSAGNEAIYVTKDDEVFAFGNNHNACLGLGDVMSSLTPRKIEGLCKK 78
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG--QLGHGTTQSALVPEQVK 245
+A+ +F + H + E W G NG QLG+GTT L+P ++
Sbjct: 79 GMFAL------AFGSG--PHVVAATENGEIYSW----GHNGYCQLGNGTTNQGLLPHRIT 126
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPI 301
+ + CG H+ V++ G+V++WG G G N S R
Sbjct: 127 GNLGSCKISQIACGSHHSLVLTDRGEVFAWGYNNCGQVGSGATANISTPRKVVS------ 180
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ G + V +ACG ++ V D G +++ WG +G LG G ++ +P V
Sbjct: 181 VLGG--------KRVVSIACGQTSSLAVVDSG-EVYGWGYNGNGQLGLGNNVNQPSPCKV 231
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 13/144 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FG N LG G S+L P +++ L + ++ ++ G H + G+++SWG
Sbjct: 48 FAFGNNHNACLGLGDVMSSLTPRKIEGLCKKGMFALAFGSGP-HVVAATENGEIYSWGHN 106
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
G C + T N+ + P I+GN Q+ACG+ H++++TD G ++++
Sbjct: 107 ---GYCQLGNGTTNQG---LLPHRITGN----LGSCKISQIACGSHHSLVLTDRG-EVFA 155
Query: 339 WGRGRSGVLGTGKTIDFFAPAIVL 362
WG G +G+G T + P V+
Sbjct: 156 WGYNNCGQVGSGATANISTPRKVV 179
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 11/102 (10%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ S+ G SLA+ ++G ++ WG + G + V+ +P V +G + +
Sbjct: 186 RVVSIACGQTSSLAVVDSGEVYGWG---YNGNGQLGLGNNVNQPSPCKVSSLNGLIISQA 242
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
ACG H +AL G Y +WGAN+ GQLG G++ +
Sbjct: 243 ACGYAHSMALSDEGNIY--------TWGANSYGQLGTGNKAN 276
>gi|410208768|gb|JAA01603.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410264078|gb|JAA20005.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410293804|gb|JAA25502.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
gi|410338541|gb|JAA38217.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 2 [Pan troglodytes]
Length = 527
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P ++ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 130/311 (41%), Gaps = 50/311 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQTSSMAVL------DNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEE 369
V W L+ E
Sbjct: 339 PAVTWRLLSVE 349
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|403355850|gb|EJY77515.1| RCC1 and BTB domain-containing protein, putative [Oxytricha
trifallax]
Length = 546
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 83/328 (25%), Positives = 139/328 (42%), Gaps = 72/328 (21%)
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
+A+ N G ++ +G G S +P V V V C H + +
Sbjct: 79 IALTNNGKVFSFG---FNVKGQLGHGDQTSINSPKQVEALSRKFVTAVGCSYYHTIFSCA 135
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
+++ YS G N+ GQLGLG+ + + P +IE N + + CG +H+ +
Sbjct: 136 -------DEMEIYSCGRNDYGQLGLGNLDDKNSPTLIEALNGKR---IVSIGCGQYHSVV 185
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+ ++ ++FG ++GQLG G+ + +P++VK L + CG +HT
Sbjct: 186 SS--------IDGEIFSFGRNDSGQLGITGSDGNISLPKEVKNLKS----TQIACGYYHT 233
Query: 264 SVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
+++ G ++SWG + G+G+ + I P L+ + Q+ V V
Sbjct: 234 VAINN-GQLYSWGKNDSGQLGIGI---------YSAKEILPTLV-----RDLEDQEIVSV 278
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI------------------- 360
ACG HT+ + G +L+S+GR G LG G T + P +
Sbjct: 279 ACGCYHTLALGYAG-QLFSFGRNSHGQLGDGTTNNSCKPLLIQGLIDKKVCQIAAGFYHS 337
Query: 361 ------VLWPPLTEEFKQDELNTGGLDD 382
V+ PL E+FKQ LN L D
Sbjct: 338 IVLANPVIRNPLVEDFKQ-LLNNQELSD 364
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 103/231 (44%), Gaps = 38/231 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKG---EDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
V++VA G+EH + L G+ Y G E S G N Q + + K++E
Sbjct: 2 NVIQVAAGNEHTLILTDCGDVYSGGYNEMGNSLSQGPNAMSQNNNNNNTRTGQLKLVEKL 61
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ ++ + G H LT+ + ++FG GQLGHG S P+QV
Sbjct: 62 RGKNIVKIF-ASNGCEHVIALTNNGK--------VFSFGFNVKGQLGHGDQTSINSPKQV 112
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAG--DVWSWGM----EKGLGLCPNASLTRNEAGDAI 298
+ L + ++ +V C +HT + S A +++S G + GLG D
Sbjct: 113 EALSRK-FVTAVGCSYYHT-IFSCADEMEIYSCGRNDYGQLGLG----------NLDDKN 160
Query: 299 SPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
SP LI NG V + CG H+V+ + DG +++S+GR SG LG
Sbjct: 161 SPTLIEALNGKR------IVSIGCGQYHSVVSSIDG-EIFSFGRNDSGQLG 204
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 35/185 (18%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG +GS+ I P +++ +K + G ++AI+N G
Sbjct: 201 GQLGITGSDG----------NISLPKEVKN---------LKSTQIACGYYHTVAINN-GQ 240
Query: 93 LWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
L+ WG DS G G P+ V D +V VACG H +AL AG+
Sbjct: 241 LYSWGK---NDSGQLGIGIYSAKEILPTLVRDLEDQEIVSVACGCYHTLALGYAGQL--- 294
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+S+G N++GQLG G + +P +I+ V ++ G +H+ +L +
Sbjct: 295 -----FSFGRNSHGQLGDGTTNNSCKPLLIQGL---IDKKVCQIAAGFYHSIVLANPVIR 346
Query: 212 NDMLE 216
N ++E
Sbjct: 347 NPLVE 351
>gi|355749434|gb|EHH53833.1| Putative E3 ubiquitin-protein ligase HERC6 [Macaca fascicularis]
Length = 1020
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 112/246 (45%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLNVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-T 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKITTLNG---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEV 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ I G + ++CG HT ++ DG K++++G SG LG T +
Sbjct: 223 QSNKPLSIGALKNLG-----VIYISCGDEHTAVLIQDG-KVFTFGDNSSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 90/208 (43%), Gaps = 25/208 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVWDFHGHTV 129
IKI V G SLA+ ++ WG +S + G + S +P V G +
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK----NSHGQLGLGKEVPSQASPQRVRSLEGIPL 183
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 184 AQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSIGALKN 235
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++CG HTA+L + +TFG +GQLG+ T P+ V+ +
Sbjct: 236 LGVIYISCGDEHTAVLIQ--------DGKVFTFGDNSSGQLGYSPTPEKRGPQLVERIDG 287
Query: 250 YVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 288 LV--SQIDCGSYHTLAYVHTTGQVISFG 313
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/286 (26%), Positives = 122/286 (42%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + +G +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKITTLNGIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEVPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P +
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSIG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + ++ + CG HT+V+ G V+++G LG P
Sbjct: 232 AL-KNLGVIYISCGDEHTAVLIQDGKVFTFGDNSSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVISFGHGPS 317
>gi|18073943|emb|CAC86116.1| retinitis pigmentosa GTPase regulator [Homo sapiens]
Length = 815
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 113/235 (48%), Gaps = 37/235 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V V ACG H + G Y+ G NN GQLGLGD E R
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNT 129
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+I F S + +++ GS +A LT R + +G GQ+G +
Sbjct: 130 FHVISFFT--SEHKIKQLSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSN 179
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
VP+QV + V +S CG +H++ V++ G+++ +G E G LGL PN L G
Sbjct: 180 VCVPQQVT-IGNPVSWIS--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----G 230
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P L+S P + +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 231 NHRTPQLVS----EIP--EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGNPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 107/222 (48%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G+ V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGNPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|442319627|ref|YP_007359648.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441487269|gb|AGC43964.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 1096
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/315 (27%), Positives = 130/315 (41%), Gaps = 54/315 (17%)
Query: 56 APDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
AP S T+ + SV AG SL + G +W WG + G S +
Sbjct: 36 APGSARAAEGTSRQG-----SVLAGRHHSLVLKADGTVWSWGGN---NYGQLGTGSTRQN 87
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P+ VW ++ + G H +AL S D +SWGAN NGQLG G SR
Sbjct: 88 PMPARVWRLF--SITAIGAGELHSLALKS--------DGTVWSWGANTNGQLGDGTLISR 137
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P + V + G H+ +L + W +GL GQLG GT
Sbjct: 138 SVPAPVPGLTN-----VVAIAAGFSHSMVLKA--------DGTVWAWGLNAAGQLGDGTP 184
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNE 293
L P QV L + + G H+ +++ G +W+WG ++ LG T +
Sbjct: 185 TRRLTPVQVLGL---TGVKDIAAGNVHSLALTADGRLWTWGGNVDGQLG-------TGDL 234
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
G + + L P V ++ G +H++++ DG +WSWG+ +G LG G +
Sbjct: 235 VGRSTAAAL--------PGMTGVVALSGGGSHSLILKMDG-SVWSWGKNDAGQLGLGSVV 285
Query: 354 DFFAPAIVLWPPLTE 368
P V P LTE
Sbjct: 286 STPTPTQV--PGLTE 298
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 119/290 (41%), Gaps = 51/290 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
I ++ AG + SLA+ + G +W WG N L D +L+S P+PV V
Sbjct: 98 SITAIGAGELHSLALKSDGTVWSWGANTNGQLGDG------TLISRSVPAPVPGL--TNV 149
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V +A G H + L + D ++WG N GQLG G RL P +
Sbjct: 150 VAIAAGFSHSMVLKA--------DGTVWAWGLNAAGQLGDGTPTRRLTPVQVLGLT---- 197
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ G+ H+ LT R WT+G +GQLG G + LP
Sbjct: 198 -GVKDIAAGNVHSLALTADGR--------LWTWGGNVDGQLGTG---DLVGRSTAAALPG 245
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISGNGP 308
+V++ G H+ ++ G VWSWG +N+AG + ++ +
Sbjct: 246 MTGVVALSGGGSHSLILKMDGSVWSWG--------------KNDAGQLGLGSVVSTPTPT 291
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P + V V G H+V + DG +W+WG LG G +P
Sbjct: 292 QVPGLTEMVAVTGGGQHSVALRVDG-TVWAWGSNARAQLGDGTQTQRLSP 340
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 122/280 (43%), Gaps = 46/280 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK- 131
++ +V GG S+A+ G +W WG+ + G + +P V G T VK
Sbjct: 298 EMVAVTGGGQHSVALRVDGTVWAWGSNA---RAQLGDGTQTQRLSPCQV---TGLTQVKG 351
Query: 132 -VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
A G H VA+ GE ++WG+N+ GQ+G G +L P + +
Sbjct: 352 VAAGGGLHSVAVKGNGE--------VWAWGSNSEGQVGDGTYLMKLVPTTARVLVERA-- 401
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V+ G HT L +P + W +GL QLG GTT + +P QV L +
Sbjct: 402 ---DVSAGGGHTLAL----KP----DGTAWGWGLNAQSQLGDGTTTARPLPVQVLNLTR- 449
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +V G +H+ + G VW WG + +L R++ P+ +SG
Sbjct: 450 --VAAVSAGTYHSLALKEDGTVWGWGANYWGAIGDGTALNRSQ------PVKVSGT---- 497
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ VA G H++ ++ DG +W+WG G LG G
Sbjct: 498 ---LVAMTVASGNFHSLALSVDG-SVWAWGDNSLGQLGDG 533
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 122/301 (40%), Gaps = 52/301 (17%)
Query: 66 TNHKAPIKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVW 122
T + ++ V AGG +LA+ G W WG L D +T + P PV
Sbjct: 392 TTARVLVERADVSAGGGHTLALKPDGTAWGWGLNAQSQLGDGTT--------TARPLPVQ 443
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KII 181
+ V V+ G+ H +AL ED + WGAN G +G G +R +P K+
Sbjct: 444 VLNLTRVAAVSAGTYHSLALK--------EDGTVWGWGANYWGAIGDGTALNRSQPVKVS 495
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALV 240
T V G+FH+ L+ ++ W +G GQLG GT T +
Sbjct: 496 GTL------VAMTVASGNFHSLALS--------VDGSVWAWGDNSLGQLGDGTVTPTRNA 541
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P +V P +VS+ G H+ + + G VW WG + C + N P
Sbjct: 542 PFRV---PNLEGVVSLAAGGEHSLALKADGTVWVWGRQD---TCADP---ENVGRVLRVP 592
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ G D V V G H+V++ DG LW+WGR G L G D PA
Sbjct: 593 EQVQG-------LTDAVAVRAGRCHSVVLRADG-TLWAWGRNAEGQLADGTFTDRMTPAR 644
Query: 361 V 361
V
Sbjct: 645 V 645
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 115/286 (40%), Gaps = 42/286 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
+ ++ AG S+ + G +W WG L + G + TP V G V +
Sbjct: 148 NVVAIAAGFSHSMVLKADGTVWAWG---LNAAGQLGDGTPTRRLTPVQVLGLTG--VKDI 202
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G+ H +AL + G ++WG N +GQLG GD R + V
Sbjct: 203 AAGNVHSLALTADGR--------LWTWGGNVDGQLGTGDLVGRSTAAALPGMT-----GV 249
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ G H+ +L ++ W++G + GQLG G+ S P QV P
Sbjct: 250 VALSGGGSHSLIL--------KMDGSVWSWGKNDAGQLGLGSVVSTPTPTQV---PGLTE 298
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V+V G H+ + G VW+WG A L +SP ++G
Sbjct: 299 MVAVTGGGQHSVALRVDGTVWAWGSNA------RAQLGDGTQTQRLSPCQVTG------L 346
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
Q A G H+V V +G ++W+WG G +G G + P
Sbjct: 347 TQVKGVAAGGGLHSVAVKGNG-EVWAWGSNSEGQVGDGTYLMKLVP 391
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 121/314 (38%), Gaps = 50/314 (15%)
Query: 56 APDSLEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
A L D + T P+++ + AG + SLA+ G LW WG G
Sbjct: 175 AAGQLGDGTPTRRLTPVQVLGLTGVKDIAAGNVHSLALTADGRLWTWGGNV---DGQLGT 231
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
LV T + + G VV ++ G H + L G +SWG N+ GQLGL
Sbjct: 232 GDLVGRSTAAALPGMTG--VVALSGGGSHSLILKMDGS--------VWSWGKNDAGQLGL 281
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G S P + + + VT G H+ L ++ W +G Q
Sbjct: 282 GSVVSTPTPTQVPGLTE-----MVAVTGGGQHSVAL--------RVDGTVWAWGSNARAQ 328
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG GT L P QV L Q V V+ GL H+ V G+VW+WG S
Sbjct: 329 LGDGTQTQRLSPCQVTGLTQ-VKGVAAGGGL-HSVAVKGNGEVWAWG-----------SN 375
Query: 290 TRNEAGDAISPILISGNGPHGPK-FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ + GD + + P + + V+ G HT+ + DG W WG LG
Sbjct: 376 SEGQVGDGTYLMKLV---PTTARVLVERADVSAGGGHTLALKPDGTA-WGWGLNAQSQLG 431
Query: 349 TGKTIDFFAPAIVL 362
G T P VL
Sbjct: 432 DGTTTARPLPVQVL 445
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 85/319 (26%), Positives = 118/319 (36%), Gaps = 62/319 (19%)
Query: 56 APDSLEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSST 106
A L D + +AP + S+ G SLA+ G++ WG+ L D +T
Sbjct: 826 AEGELGDGTTVARRAPAVVGPLAGVLSIAVGARHSLALLGDGSVQAWGSNIQGQLGDGTT 885
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
VS P V G V +A G +AL D ++WG N GQ
Sbjct: 886 ------VSRVLPVRVQGLTG--VAAIAAGDGFSLALK--------HDGTVWAWGGNTLGQ 929
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG L P + V V G H+ L + W +G
Sbjct: 930 LGDNTTLRSLVPVRTQALT-----GVTAVAAGRNHSLALKG--------DGTLWAWGSNT 976
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG 282
G+LG GT L P QV L + ++D G H+ V+S G VW WG + G G
Sbjct: 977 YGELGDGTQARKLAPVQVTSL---TGVSALDAGDHHSLAVTSGGKVWGWGRNQFGQVGKG 1033
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
+ N L + P V VA G H++ + D +W+WG G
Sbjct: 1034 VKSNWQLLPAQV----------------PGLTSAVAVAGGGEHSLALLSD-RSVWAWGHG 1076
Query: 343 RSGVLGTGKTIDFFAPAIV 361
G LGTG + +P V
Sbjct: 1077 DMGQLGTGMSNLRLSPVQV 1095
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 97/364 (26%), Positives = 139/364 (38%), Gaps = 90/364 (24%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKI-----CSVKAG 80
SL +DG + +G+N A L D + P+ + C AG
Sbjct: 760 SLGIALDGSVQSTGAN--------------ASGQLGDGTLFPRAEPVPVIGLSECRAIAG 805
Query: 81 GMM-SLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
G LA+ G + WG L D +T V+ P+ V G V+ +A G+
Sbjct: 806 GATHGLALKTDGRVLSWGANAEGELGDGTT------VARRAPAVVGPLAG--VLSIAVGA 857
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H +AL+ G +WG+N GQLG G SR+ P ++ V +
Sbjct: 858 RHSLALLGDGS--------VQAWGSNIQGQLGDGTTVSRVLPVRVQGLT-----GVAAIA 904
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G + L H + W +G GQLG TT +LVP + + L + +V
Sbjct: 905 AGDGFSLALKH--------DGTVWAWGGNTLGQLGDNTTLRSLVPVRTQAL---TGVTAV 953
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
G H+ + G +W+WG S T E GD G K P
Sbjct: 954 AAGRNHSLALKGDGTLWAWG-----------SNTYGELGD----------GTQARKLA-P 991
Query: 317 VQVA---------CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF-FAPAIVLWPPL 366
VQV G H++ VT G K+W WGR + G +G G ++ PA V P L
Sbjct: 992 VQVTSLTGVSALDAGDHHSLAVTSGG-KVWGWGRNQFGQVGKGVKSNWQLLPAQV--PGL 1048
Query: 367 TEEF 370
T
Sbjct: 1049 TSAV 1052
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 127/317 (40%), Gaps = 67/317 (21%)
Query: 59 SLEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
++ D + N P+K+ +V +G SLA+ G++W WG+ +S + G
Sbjct: 479 AIGDGTALNRSQPVKVSGTLVAMTVASGNFHSLALSVDGSVWAWGD----NSLGQLGDGT 534
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
V+ +P + VV +A G EH +AL + D + WG + D
Sbjct: 535 VTPTRNAPFRVPNLEGVVSLAAGGEHSLALKA--------DGTVWVWGRQDT----CADP 582
Query: 173 ESRLR----PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
E+ R P+ ++ V G H+ +L R + L W +G G
Sbjct: 583 ENVGRVLRVPEQVQGLTD-----AVAVRAGRCHSVVL----RADGTL----WAWGRNAEG 629
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QL GT + P +V L ++S G T + + G W+WG PNA
Sbjct: 630 QLADGTFTDRMTPARVDGL---TGVISFSVGSEQTLALKADGTAWAWG--------PNA- 677
Query: 289 LTRNEAGDAIS-----PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
+ + G +S P + P D VA GA H +++ DD LW+WG
Sbjct: 678 --QGQLGGGLSVPRTRPTQV-------PTLTDVRTVAMGAVHALVLKDD-LTLWAWGSNA 727
Query: 344 SGVLGTGKTIDFFAPAI 360
G +G G +D+ A +
Sbjct: 728 EGQVGDGA-LDWQAAPV 743
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 100/385 (25%), Positives = 140/385 (36%), Gaps = 95/385 (24%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKT-NHKAPIKI------CS 76
+ SL +DG + G NSL L D + T AP ++ S
Sbjct: 508 FHSLALSVDGSVWAWGDNSL--------------GQLGDGTVTPTRNAPFRVPNLEGVVS 553
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVKV 132
+ AGG SLA+ G +W+WG C P++ V P G T V V
Sbjct: 554 LAAGGEHSLALKADGTVWVWGRQDTCADPEN--------VGRVLRVPE-QVQGLTDAVAV 604
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
G H V L + D ++WG N GQL G R+ P ++ V
Sbjct: 605 RAGRCHSVVLRA--------DGTLWAWGRNAEGQLADGTFTDRMTPARVDGLT-----GV 651
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ GS T L + W +G GQLG G + P QV P
Sbjct: 652 ISFSVGSEQTLALKA--------DGTAWAWGPNAQGQLGGGLSVPRTRPTQV---PTLTD 700
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG------------------MEKGLGLCPN-ASLTRNE 293
+ +V G H V+ +W+WG + GL A+ T+
Sbjct: 701 VRTVAMGAVHALVLKDDLTLWAWGSNAEGQVGDGALDWQAAPVRSGLAASRGLAAATQYS 760
Query: 294 AGDAISPILIS---------GNGPHGPKFQD-PV-------QVACGAAHTVLVTDDGYKL 336
G A+ + S G+G P+ + PV +A GA H + + DG L
Sbjct: 761 LGIALDGSVQSTGANASGQLGDGTLFPRAEPVPVIGLSECRAIAGGATHGLALKTDGRVL 820
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
SWG G LG G T+ APA+V
Sbjct: 821 -SWGANAEGELGDGTTVARRAPAVV 844
>gi|325180310|emb|CCA14713.1| regulator of chromosome condensation (RCC1)like protein putative
[Albugo laibachii Nc14]
Length = 393
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 29/218 (13%)
Query: 155 VCYSWGANNNGQLGLGDRES--------RLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
++WG GQLG G E L P+I+ETF + + ++ G+ H+A +
Sbjct: 6 TVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKN---IAKLDFGATHSAAID 62
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL--VPEQVKELPQYVYLVSVDCGLFHTS 264
E +T+G E QLGHG++ + +P V L + + +V + CG +HT
Sbjct: 63 K--------EGKLYTWGSNEYHQLGHGSSNQDIQSIPRVVDAL-RGIKIVDISCGEYHTG 113
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGA 323
V G +++WG G + + +L D P L+ G PV+ V CG
Sbjct: 114 AVDEEGKLFTWGW-GGSTMKGSGALGHAGGEDESIPRLVRTLVDQGV----PVKSVECGE 168
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HTV +T DG ++W+WG G G LG G + +F P V
Sbjct: 169 LHTVALTKDG-EIWAWGNGEYGRLGNGASDNFEVPEPV 205
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/272 (27%), Positives = 113/272 (41%), Gaps = 28/272 (10%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
I + G S AID G L+ WG+ + S P V G +V +
Sbjct: 47 NIAKLDFGATHSAAIDKEGKLYTWGSNEYHQLGHGSSNQDIQSI-PRVVDALRGIKIVDI 105
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANN---NGQLGLGDRESRLRPKIIETF-NQDS 188
+CG H A+ G+ L + WG + +G LG E P+++ T +Q
Sbjct: 106 SCGEYHTGAVDEEGK------LFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGV 159
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V V CG HT LT + W +G GE G+LG+G + + VPE V+
Sbjct: 160 P--VKSVECGELHTVALTK--------DGEIWAWGNGEYGRLGNGASDNFEVPEPVEYFA 209
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ S+ G T ++ G+V+SWG+ L LT + P+++
Sbjct: 210 DE-NIASISAGRDFTFAITEHGEVYSWGINSHSQLGLGGGLTVDYYNMETIPVVVE---- 264
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+ QV+ G H VT+DG K++ WG
Sbjct: 265 -ALSNVNVAQVSAGYDHAAAVTNDG-KMFMWG 294
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/249 (22%), Positives = 108/249 (43%), Gaps = 37/249 (14%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+P + F G + K+ G+ H A+ G+ Y+WG+N QLG G
Sbjct: 35 LSPRILETFEGKNIAKLDFGATHSAAIDKEGK--------LYTWGSNEYHQLGHGSSNQD 86
Query: 176 LR--PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG---LGENGQL 230
++ P++++ + +++CG +HT + + W +G + +G L
Sbjct: 87 IQSIPRVVDALR---GIKIVDISCGEYHTGAVDEEGKL------FTWGWGGSTMKGSGAL 137
Query: 231 GHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
GH + +P V+ L Q V + SV+CG HT ++ G++W+WG + G N +
Sbjct: 138 GHAGGEDESIPRLVRTLVDQGVPVKSVECGELHTVALTKDGEIWAWGNGE-YGRLGNGAS 196
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E + + ++ ++ G T +T+ G +++SWG LG
Sbjct: 197 DNFEVPEPVEYF----------ADENIASISAGRDFTFAITEHG-EVYSWGINSHSQLGL 245
Query: 350 GK--TIDFF 356
G T+D++
Sbjct: 246 GGGLTVDYY 254
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 98/236 (41%), Gaps = 56/236 (23%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P+K SV+ G + ++A+ G +W WGN + G + + P PV F +
Sbjct: 160 PVK--SVECGELHTVALTKDGEIWAWGN---GEYGRLGNGASDNFEVPEPVEYFADENIA 214
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD------RESRLRPKIIETF 184
++ G + A+ GE YSWG N++ QLGLG P ++E
Sbjct: 215 SISAGRDFTFAITEHGE--------VYSWGINSHSQLGLGGGLTVDYYNMETIPVVVEAL 266
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKR-----------PNDM--------LESMC------ 219
+ + V +V+ G H A +T+ + P++M + C
Sbjct: 267 SNVN---VAQVSAGYDHAAAVTNDGKMFMWGAKLWLEPHEMTILKDETIISVQCGRYYTA 323
Query: 220 --------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+TFG G + LGHG ++ L P V+ L +Y +VS+ CG H ++
Sbjct: 324 ALSASGNLFTFGKGHSNCLGHGERKTQLQPLLVESLNRY-NVVSMTCGYSHMGALT 378
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 118/300 (39%), Gaps = 53/300 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGAL--WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF--HGH 127
IKI + G + A+D G L W WG + S G P V G
Sbjct: 100 IKIVDISCGEYHTGAVDEEGKLFTWGWGGSTMKGSGALGHAGGEDESIPRLVRTLVDQGV 159
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V V CG H VAL GE ++WG G+LG G ++ P+ +E F +
Sbjct: 160 PVKSVECGELHTVALTKDGE--------IWAWGNGEYGRLGNGASDNFEVPEPVEYFADE 211
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA------LVP 241
+ + ++ G T +T +++G+ + QLG G + +P
Sbjct: 212 N---IASISAGRDFTFAITEHGE--------VYSWGINSHSQLGLGGGLTVDYYNMETIP 260
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
V+ L V + V G H + V++ G ++ WG + L L P+ I
Sbjct: 261 VVVEALSN-VNVAQVSAGYDHAAAVTNDGKMFMWGAK--LWLEPHE-----------MTI 306
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
L K + + V CG +T ++ G L+++G+G S LG G+ P +V
Sbjct: 307 L---------KDETIISVQCGRYYTAALSASG-NLFTFGKGHSNCLGHGERKTQLQPLLV 356
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 70/142 (49%), Gaps = 17/142 (11%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-------LVSVDCGLFHTSVVSS 268
+S +T+G G GQLGHG+ + + +EL + + +D G H++ +
Sbjct: 4 QSTVFTWGTGTQGQLGHGSFEKTGIRSSYEELSPRILETFEGKNIAKLDFGATHSAAIDK 63
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G +++WG + L +S N+ +I ++ + G K V ++CG HT
Sbjct: 64 EGKLYTWGSNEYHQLGHGSS---NQDIQSIPRVV---DALRGIKI---VDISCGEYHTGA 114
Query: 329 VTDDGYKLWSWGRGRSGVLGTG 350
V ++G KL++WG G S + G+G
Sbjct: 115 VDEEG-KLFTWGWGGSTMKGSG 135
>gi|357137054|ref|XP_003570116.1| PREDICTED: uncharacterized protein LOC100825305 isoform 1
[Brachypodium distachyon]
Length = 1005
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 52/303 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL--------VSSFTPSPVWD-F 124
+ ++ G + A+ +G L+ WG EG SL S + P ++
Sbjct: 322 VKAIAFGAKHTCALAISGELFEWG---------EGTHSLGVWDDQCQRSQWYPHKLFGPL 372
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G +VVK+ACG H + S+G+ + ++G G LG GD S RPK +E+
Sbjct: 373 EGVSVVKMACGQWHTAIISSSGQLF--------TYGDGTFGVLGHGDTSSVARPKEVESL 424
Query: 185 NQDSPWAVYEVTCGSFHTALLTH------RKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
V V CG +HTA + P+ L +T+G + G+LGH +S
Sbjct: 425 K---GLRVKAVACGPWHTAAIVEILGTVKSNAPSGKL----FTWGDADRGKLGHSDKESK 477
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
LVP VK L + V C T ++ G V++ G ++ + L + D+
Sbjct: 478 LVPTCVKALTDSDF-AQVSCAKALTVALTITGVVFTIGSKE------HGQLGSHRLDDSS 530
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ S GP +F +++ G++H ++T +G K+++WG+G G LG G +D +P
Sbjct: 531 ---ICSVEGPLKTEFVR--EISSGSSHVAVLTMNG-KVFTWGKGTEGQLGLGNYVDRSSP 584
Query: 359 AIV 361
+V
Sbjct: 585 TLV 587
Score = 42.0 bits (97), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 85/247 (34%), Gaps = 65/247 (26%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + + G + I ++G L+ +G+ G S P V G V
Sbjct: 375 VSVVKMACGQWHTAIISSSGQLFTYGDGTF---GVLGHGDTSSVARPKEVESLKGLRVKA 431
Query: 132 VACGSEHVVALVSAGETYKGE--DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H A+V T K ++WG + G+LG D+ES+L P ++ DS
Sbjct: 432 VACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALT-DSD 490
Query: 190 WA--------------------------------------------------VYEVTCGS 199
+A V E++ GS
Sbjct: 491 FAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFVREISSGS 550
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
H A+LT + +T+G G GQLG G P V+ L + S+ CG
Sbjct: 551 SHVAVLT--------MNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK-QVDSIACG 601
Query: 260 LFHTSVV 266
T V
Sbjct: 602 SNFTVAV 608
Score = 41.6 bits (96), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +++ GS HV L G+ + +WG GQLGLG+ R P ++E
Sbjct: 543 VREISSGSSHVAVLTMNGKVF--------TWGKGTEGQLGLGNYVDRSSPTLVEALEDKQ 594
Query: 189 PWAVYEVTCGS-FHTALLTHR 208
V + CGS F A+ HR
Sbjct: 595 ---VDSIACGSNFTVAVCLHR 612
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 45/157 (28%)
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL------------------- 289
Q + + +V CG H ++V+ G+V+SWG E G L S+
Sbjct: 266 QILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAI 325
Query: 290 ---TRNEAGDAISPILIS-GNGPHGPKFQDP---------------------VQVACGAA 324
++ AIS L G G H D V++ACG
Sbjct: 326 AFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQW 385
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT +++ G +L+++G G GVLG G T P V
Sbjct: 386 HTAIISSSG-QLFTYGDGTFGVLGHGDTSSVARPKEV 421
>gi|428170910|gb|EKX39831.1| hypothetical protein GUITHDRAFT_164838 [Guillardia theta CCMP2712]
Length = 1983
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 90/315 (28%), Positives = 135/315 (42%), Gaps = 49/315 (15%)
Query: 66 TNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS---SFTPSPVW 122
T+ + KI V G SLA G ++ WG + F V +F P PV
Sbjct: 1207 TSFPSNTKIVEVACGCEHSLARSFDGGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVL 1266
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
+ + ++ +ACG H + L S + SWGA GQLGL S+ P++++
Sbjct: 1267 NLKRYFILSIACGRWHNMTLTSERQVL--------SWGAGEFGQLGLDHNLSKGTPQMVK 1318
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES---MCWTFGLGENGQLGHGTTQSAL 239
+ +P ++ CG +H+A + LES + W G GQLGHG T+S
Sbjct: 1319 ALDGRAPC---KILCGGWHSAAI---------LESGKILLW--GKNVYGQLGHGDTKSCS 1364
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDA 297
P + L + + G HT VV A V++ G ++ LGL + +N
Sbjct: 1365 APRVNQYLRLEGKVRTAGLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKN----- 1419
Query: 298 ISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
P+ I NG ++ QVA G H++ ++ G ++WSWG G LG D
Sbjct: 1420 -VPVSIEELNG------KNICQVAAGDQHSLALSVFG-EVWSWGGSPFGQLGHETITDKL 1471
Query: 357 APAIVLWPPLTEEFK 371
AP PL E K
Sbjct: 1472 APT-----PLLERHK 1481
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 119/287 (41%), Gaps = 58/287 (20%)
Query: 93 LWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
++MWG N L + S E P V F V A G +H + L + G
Sbjct: 92 VFMWGDGENGKLGNQSEE------IQHVPYIVPAFRNVLVKVCALGKQHTLFLSADG--- 142
Query: 150 KGEDLVCYSWGANNNGQLGLGDRE-SRLRP--------------KIIETFNQDSPWAVYE 194
V S G+N GQLG+GD SR P II++ N +
Sbjct: 143 -----VVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLNN-----IVG 192
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
+ G +H+ L ND + W G G G+LG G+ +A P V L Q +V
Sbjct: 193 IAAGYYHSLAL------NDTGKIFSW--GSGSWGKLGIGSDANAESPRFVASL-QNSKVV 243
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
+ CG HT+ +++ GDVW+WG KGL L + SP L + G +
Sbjct: 244 HIACGAHHTAAITTVGDVWTWG--KGL----RGQLGHKSVKEEFSPRLNASLRKCGAQ-- 295
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ CG HT+++ G +L+S G G LG G D P +V
Sbjct: 296 ---KIRCGDDHTLVILRSG-QLYSMGANTHGQLGLGDATDRIIPTLV 338
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 113/265 (42%), Gaps = 36/265 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+KI V G LA+ ++ WG+ ++ ++ P + +++
Sbjct: 1695 VKIMKVACGTYHCLALTEEKRVYAWGDGKWGNAGVSNTNDVLE---PQELSSLAACSIIG 1751
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V G H AL G+ + WG N+NGQLGLG S + N D
Sbjct: 1752 VHAGGFHSAALSQYGD--------LFMWGKNSNGQLGLGT-TSAAEDSPTKISNLDG--V 1800
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG--TTQSALVPEQVKELPQ 249
V +V+ G+ H+A+L PN +T GL NGQLG G +S L + Q
Sbjct: 1801 VMDVSLGANHSAVLMQVTSPN------LFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQ 1854
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+VS CG HT+ VS GD+ +WG + L A L+++ P + +
Sbjct: 1855 ---IVSASCGAAHTAAVSQYGDLITWGNGRNGQLGLKAGLSKDIENPVQLPAICN----- 1906
Query: 310 GPKFQDP-VQVACGAAHTVLVTDDG 333
DP V+V CG T++V++ G
Sbjct: 1907 -----DPMVKVVCGQEVTIVVSEKG 1926
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 115/262 (43%), Gaps = 37/262 (14%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGH 127
A I V AGG S A+ G L+MWG +S+ + G S+ +P+ + + G
Sbjct: 1745 AACSIIGVHAGGFHSAALSQYGDLFMWGK----NSNGQLGLGTTSAAEDSPTKISNLDG- 1799
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V+ V+ G+ H L+ ++ G N NGQLGLGD R ++ +
Sbjct: 1800 VVMDVSLGANHSAVLMQVTSPN------LFTCGLNANGQLGLGDFVDRSTLTAVDALDDR 1853
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ +CG+ HTA ++ D++ T+G G NGQLG S + V +L
Sbjct: 1854 Q---IVSASCGAAHTAAVSQY---GDLI-----TWGNGRNGQLGLKAGLSKDIENPV-QL 1901
Query: 248 PQYVY--LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
P +V V CG T VVS G+++ G E +GL N+S R +S + G
Sbjct: 1902 PAICNDPMVKVVCGQEVTIVVSEKGELYMAGYESTIGLGGNSSRRREF---DVSFREVEG 1958
Query: 306 NGPHGPKFQDPVQVACGAAHTV 327
P Q+A G+ H +
Sbjct: 1959 -------LIQPTQIAVGSVHVL 1973
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 84/378 (22%), Positives = 143/378 (37%), Gaps = 76/378 (20%)
Query: 36 GFSGSNSLVPCVIEQFLTIGAPDS----LEDDSKTNHKAPI--------KICSVKAGGMM 83
G +++LV V + +G+ L+D S+T P+ IC V AG
Sbjct: 1382 GLGANHTLVVMVANKVFAMGSNIDGQLGLDDPSRTGKNVPVSIEELNGKNICQVAAGDQH 1441
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG--HTVVKVACGSEHVVA 141
SLA+ G +W WG P E ++ P+P+ + H V +ACG A
Sbjct: 1442 SLALSVFGEVWSWGGSPFGQLGHE---TITDKLAPTPLLERHKIPPDVKSIACGYTFSAA 1498
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ + GE ++WG +G+LG + P +I+ F++ V ++ CG H
Sbjct: 1499 MSAKGEV--------FTWGNGESGELGHAPKVLTYAPSLIKDFSE-----VVQIACGFKH 1545
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
A + + R + + + +G+N G+ + V + + F
Sbjct: 1546 MAGIVFKPRMKTI--ELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHHTTRTSA--F 1601
Query: 262 HTSVVSSAGDVWSWGME-------KGLGLCPNASLTRNEAGDAISPI------------- 301
S G V+ WG + +GL + SL ++ +I I
Sbjct: 1602 SASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATSIVHISANSDMSAFVTDS 1661
Query: 302 ---LISGNGPHG-------PKFQDPVQ-----------VACGAAHTVLVTDDGYKLWSWG 340
+SG HG PV+ VACG H + +T++ ++++WG
Sbjct: 1662 GSLYVSGGSEHGRLGLGHMAPAPTPVEIRSLNTVKIMKVACGTYHCLALTEE-KRVYAWG 1720
Query: 341 RGRSGVLGTGKTIDFFAP 358
G+ G G T D P
Sbjct: 1721 DGKWGNAGVSNTNDVLEP 1738
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/280 (27%), Positives = 127/280 (45%), Gaps = 43/280 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + A MS + ++G+L++ G + G + + TP + + ++KVA
Sbjct: 1645 IVHISANSDMSAFVTDSGSLYVSGGS---EHGRLGLGHMAPAPTPVEIRSLNTVKIMKVA 1701
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG+ H +AL E+ Y+WG G G+ + L P+ + + + ++
Sbjct: 1702 CGTYHCLALT--------EEKRVYAWGDGKWGNAGVSNTNDVLEPQELSSL---AACSII 1750
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVY 252
V G FH+A L+ D+ + +G NGQLG GTT +A P ++ L V
Sbjct: 1751 GVHAGGFHSAALSQY---GDL-----FMWGKNSNGQLGLGTTSAAEDSPTKISNLDGVVM 1802
Query: 253 LVSVDCGLFHTSVV--SSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGP 308
VS+ G H++V+ ++ ++++ G+ LGL + A DA+ I
Sbjct: 1803 DVSL--GANHSAVLMQVTSPNLFTCGLNANGQLGLGDFVDRSTLTAVDALDDRQI----- 1855
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
V +CGAAHT V+ G L +WG GR+G LG
Sbjct: 1856 --------VSASCGAAHTAAVSQYG-DLITWGNGRNGQLG 1886
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 91/212 (42%), Gaps = 33/212 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG NG+LG G P+ I +F ++ + EV CG H+ + +
Sbjct: 1182 YTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTK--IVEVACGCEHSLARS--------FD 1231
Query: 217 SMCWTFGLGENGQLGH------GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ +G G+ GQLG A P+ V L +Y +++S+ CG +H ++S
Sbjct: 1232 GGVYAWGAGDRGQLGSLENFDCVKINYAFNPQPVLNLKRY-FILSIACGRWHNMTLTSER 1290
Query: 271 DVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
V SWG + LGL N S + A+ + P ++ CG H+
Sbjct: 1291 QVLSWGAGEFGQLGLDHNLSKGTPQMVKALDG-------------RAPCKILCGGWHSAA 1337
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ + G K+ WG+ G LG G T AP +
Sbjct: 1338 ILESG-KILLWGKNVYGQLGHGDTKSCSAPRV 1368
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 74/334 (22%), Positives = 129/334 (38%), Gaps = 78/334 (23%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
HK P + S+ G S A+ G ++ WGN +S G V ++ PS + DF
Sbjct: 1480 HKIPPDVKSIACGYTFSAAMSAKGEVFTWGN---GESGELGHAPKVLTYAPSLIKDFS-- 1534
Query: 128 TVVKVACGSEHVVALVS---------AGETYKGEDLVCYS-------------------- 158
VV++ACG +H+ +V G + G++ +S
Sbjct: 1535 EVVQIACGFKHMAGIVFKPRMKTIELTGSSNIGDNSTTFSGSIAAGSVSGSTRSHTTGHH 1594
Query: 159 --------------------WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
WG + GQLG+ ++ P ++++ S + ++
Sbjct: 1595 TTRTSAFSASNQKRHGCVFVWGEDTCGQLGIRGLQAARSPSLMQSLLATS---IVHISAN 1651
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
S +A +T + G E+G+LG G A P +++ L V ++ V C
Sbjct: 1652 SDMSAFVTD--------SGSLYVSGGSEHGRLGLGHMAPAPTPVEIRSL-NTVKIMKVAC 1702
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
G +H ++ V++WG G NA ++ D + P +S +
Sbjct: 1703 GTYHCLALTEEKRVYAWGD----GKWGNAGVSNTN--DVLEPQELSSLAA-----CSIIG 1751
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
V G H+ ++ G L+ WG+ +G LG G T
Sbjct: 1752 VHAGGFHSAALSQYG-DLFMWGKNSNGQLGLGTT 1784
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 87/205 (42%), Gaps = 23/205 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I + AG SLA+++ G ++ WG+ G S ++ +P V VV +A
Sbjct: 190 IVGIAAGYYHSLALNDTGKIFSWGSGSW---GKLGIGSDANAESPRFVASLQNSKVVHIA 246
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG+ H A+ + G+ ++WG GQLG + P++ + +
Sbjct: 247 CGAHHTAAITTVGDV--------WTWGKGLRGQLGHKSVKEEFSPRLNASLRK---CGAQ 295
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CG HT ++ + ++ G +GQLG G ++P V +
Sbjct: 296 KIRCGDDHTLVI--------LRSGQLYSMGANTHGQLGLGDATDRIIPTLVTGFANE-KV 346
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGME 278
+ +D + +++ G V+++G E
Sbjct: 347 IDIDAKGCRSIALTNTGKVFAFGNE 371
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/312 (22%), Positives = 129/312 (41%), Gaps = 60/312 (19%)
Query: 58 DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS-- 115
+S++ + A + + + G + A+ + G ++ WG S +G L S
Sbjct: 539 ESVKHPKRIETLAKMSVVFIACGKDSTAALTDTGKVYTWGK------SAQGKLGLGSGKP 592
Query: 116 ---FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
P V D H V +++ G H + + +K + WG+N GQLG+
Sbjct: 593 LAIVVPQLVQDLSSHVVCQISLGRNHAAC---STDMHK-----FFVWGSNTFGQLGIPHI 644
Query: 173 ESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
S + P I + + + + + CG +HT + T+ + G G +GQLG
Sbjct: 645 SSYMPDPYEITSLREAN---IRSIACGGWHTLISTN--------TGSVMSCGKGWHGQLG 693
Query: 232 HGTTQSALVPEQVKELPQY---------VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLG 282
HG +S + K LP + ++V V G ++ +++ G +++WG
Sbjct: 694 HGDYES--LTALSKTLPYFKKIVEGFGDSFIVKVSAGKESSAAITNKGRLFTWGKGDEYQ 751
Query: 283 LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV---ACGAAHTVLVTDDGYKLWSW 339
L +S +NEA P +F ++V + G +H + + G +SW
Sbjct: 752 LGHESS--KNEAY------------PREVEFFAKIRVVDVSIGDSHMLALDYSGLP-YSW 796
Query: 340 GRGRSGVLGTGK 351
G G +G LG G+
Sbjct: 797 GNGSAGQLGHGE 808
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E +T+G G NG+LGHG P+++ P +V V CG H+ S G V++W
Sbjct: 1178 EYHIYTWGCGVNGRLGHGFHTGYSTPQEITSFPSNTKIVEVACGCEHSLARSFDGGVYAW 1237
Query: 276 GM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G ++G LG N + P+L K + +ACG H + +T +
Sbjct: 1238 GAGDRGQLGSLENFDCVKINYAFNPQPVL-------NLKRYFILSIACGRWHNMTLTSE- 1289
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ SWG G G LG + P +V
Sbjct: 1290 RQVLSWGAGEFGQLGLDHNLSKGTPQMV 1317
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 78/203 (38%), Gaps = 29/203 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ + G + AI G +W WG G S+ F+P K+
Sbjct: 241 KVVHIACGAHHTAAITTVGDVWTWGKGL---RGQLGHKSVKEEFSPRLNASLRKCGAQKI 297
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
CG +H + ++ +G+ YS GAN +GQLGLGD R+ P ++ F + V
Sbjct: 298 RCGDDHTLVILRSGQ--------LYSMGANTHGQLGLGDATDRIIPTLVTGFANEK---V 346
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ + LT+ + + FG L +P V LP+
Sbjct: 347 IDIDAKGCRSIALTNTGK--------VFAFGNETEPHLNR-------IPRFVAGLPKSDL 391
Query: 253 LVSVDCGLFHTSVVSSAGDVWSW 275
+++V +S G ++ W
Sbjct: 392 IIAVARTAHFDFAISDTGQLFRW 414
Score = 48.1 bits (113), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 114/282 (40%), Gaps = 40/282 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I +V AI + G L+ W P SS E ++ SF VV++
Sbjct: 392 IIAVARTAHFDFAISDTGQLFRW----RPFSSEEESSRMLESFHAIK-------GVVRMF 440
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H+ A++ + E + ++ + + + + E KI+ ++ +
Sbjct: 441 CGHNHM-AVICSPEMGCTQAMISRNKSTSFSSDISRASLEKFPSEKILPALGTNTEY--- 496
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-----TTQSALVPEQVKELP 248
F T + R P+ + +T+G G G+LGHG + +S P++++ L
Sbjct: 497 ---LDEFATVQV--RDSPSREGDGYIYTYGKGVFGRLGHGVEYTRSEESVKHPKRIETLA 551
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + +V + CG T+ ++ G V++WG + LGL L + P L+
Sbjct: 552 K-MSVVFIACGKDSTAALTDTGKVYTWGKSAQGKLGLGSGKPLA------IVVPQLVQDL 604
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
H Q++ G H TD +K + WG G LG
Sbjct: 605 SSH-----VVCQISLGRNHAACSTDM-HKFFVWGSNTFGQLG 640
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I V AG S AI N G L+ WG D G S + P V F VV V+
Sbjct: 722 IVKVSAGKESSAAITNKGRLFTWGK---GDEYQLGHESSKNEAYPREVEFFAKIRVVDVS 778
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG---DRESRLRPKII 181
G H++AL +G + YSWG + GQLG G +RE+ RP ++
Sbjct: 779 IGDSHMLALDYSG--------LPYSWGNGSAGQLGHGEMCERETLPRPIML 821
Score = 43.1 bits (100), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 78/165 (47%), Gaps = 25/165 (15%)
Query: 210 RPNDMLE-SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVV 266
R N L+ S + +G GENG+LG+ + + VP V P + ++ C L HT +
Sbjct: 82 RENIELQGSHVFMWGDGENGKLGNQSEEIQHVPYIV---PAFRNVLVKVCALGKQHTLFL 138
Query: 267 SSAGDVWSWGM----EKGLG------LCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
S+ G V S G + G+G P + ++ ++ D + I+ S N +
Sbjct: 139 SADGVVLSCGSNVYGQLGMGDHMLSRSTPVSEPSKQKSLDKLQAIIQSLN--------NI 190
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V +A G H++ + D G K++SWG G G LG G + +P V
Sbjct: 191 VGIAAGYYHSLALNDTG-KIFSWGSGSWGKLGIGSDANAESPRFV 234
>gi|401413326|ref|XP_003886110.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
gi|325120530|emb|CBZ56084.1| putative regulator of chromosome condensation domain-containing
protein [Neospora caninum Liverpool]
Length = 717
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 87/283 (30%), Positives = 117/283 (41%), Gaps = 62/283 (21%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR------ 177
G V ++ACG +HV A V+ E+ Y WG GQ+G SR
Sbjct: 404 LRGKRVTQIACG-KHVSAAVT-------EEGDLYVWGEGRGGQVGPPPSPSRRSQDRKKS 455
Query: 178 ----------------PKIIE---------TFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
P+ +E F + +P V +V CGS H A LT
Sbjct: 456 DCISTSSSGLSFNVRTPRKLEVYGLAEGEEAFRERTPKKVVQVACGSSHCAALTE----- 510
Query: 213 DMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+T+G + GQLG G ++ L P +V L +VSV CG F T +S G+
Sbjct: 511 ---NGEVYTWGSDDYGQLGLGKESRFVLSPRRVDTLADK-KVVSVRCGHFFTCCTTSTGE 566
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH-GPKFQDP---VQVACGAAHTV 327
V+ WG + G C N DA P+LIS P G + + V G H
Sbjct: 567 VFVWGYGRD-GECGNGR------SDAALPVLISTLEPQPGGRKRGRGKVVDTVAGGGHLA 619
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF 370
T++G LW WGRGR G LG G I+ A + + P L EE
Sbjct: 620 AWTEEG-GLWMWGRGREGQLGRGDAIESVAASRDV-PQLVEEL 660
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 85/388 (21%), Positives = 138/388 (35%), Gaps = 102/388 (26%)
Query: 31 MDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+DGQLG GS L++ P + + + + I AG S+ +
Sbjct: 187 IDGQLGLGGS----------ILSVSTPQRVPASALHDGEC---ISQCAAGAFHSVCCTSL 233
Query: 91 GALWMWGNC-----------PLPDSSTEGGFSLVSSFTPSP----------------VWD 123
G ++ WG P S+ G + S T S +W
Sbjct: 234 GRVFTWGRGGKNRLGHDWPRDAPSSAVSSGDKPLRSSTLSSGVAETAVQTLPKCVEGLWR 293
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------------GD 171
VV VACG +H +AL +GE YSWG N +G+ G G+
Sbjct: 294 VSAR-VVAVACGEDHTLALTESGEV--------YSWGGNAHGECGRAETSDNAEAEGGGE 344
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R+ +P+ + W V G +D ++ G
Sbjct: 345 RQPARKPR------RSWLWGVIRGDKGEGDVDTSERDSSASDA-----------DSPWAG 387
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
+ LV +V + + + CG ++ V+ GD++ WG +G + P S +R
Sbjct: 388 RTEKERGLVGGRVDGALRGKRVTQIACGKHVSAAVTEEGDLYVWGEGRGGQVGPPPSPSR 447
Query: 292 ----NEAGDAIS----------------PILISGNGPHGPKFQDP---VQVACGAAHTVL 328
+ D IS + G + + P VQVACG++H
Sbjct: 448 RSQDRKKSDCISTSSSGLSFNVRTPRKLEVYGLAEGEEAFRERTPKKVVQVACGSSHCAA 507
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+T++G ++++WG G LG GK F
Sbjct: 508 LTENG-EVYTWGSDDYGQLGLGKESRFV 534
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 113/304 (37%), Gaps = 96/304 (31%)
Query: 131 KVACGSEHVV--ALVSAGET-YKGED-----LVCYSWGANNNGQLGLGDR-ESRLRPKII 181
++A G E +V A+ S ET +G++ V YSWG+ +GQLGLG S P+ +
Sbjct: 147 RLAEGGERLVPSAVASCSETGSEGKEGSSGSRVLYSWGSGIDGQLGLGGSILSVSTPQRV 206
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH--------- 232
+ + G+FH+ T R +T+G G +LGH
Sbjct: 207 PASALHDGECISQCAAGAFHSVCCTSLGR--------VFTWGRGGKNRLGHDWPRDAPSS 258
Query: 233 -----------GTTQSALVPEQVKELPQYV--------YLVSVDCGLFHTSVVSSAGDVW 273
T S + V+ LP+ V +V+V CG HT ++ +G+V+
Sbjct: 259 AVSSGDKPLRSSTLSSGVAETAVQTLPKCVEGLWRVSARVVAVACGEDHTLALTESGEVY 318
Query: 274 SWGMEKGLGLCPNASLTRN----------------------------------------E 293
SWG G C A + N
Sbjct: 319 SWGG-NAHGECGRAETSDNAEAEGGGERQPARKPRRSWLWGVIRGDKGEGDVDTSERDSS 377
Query: 294 AGDAISPI---------LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
A DA SP L+ G + + Q+ACG + VT++G L+ WG GR
Sbjct: 378 ASDADSPWAGRTEKERGLVGGRVDGALRGKRVTQIACGKHVSAAVTEEG-DLYVWGEGRG 436
Query: 345 GVLG 348
G +G
Sbjct: 437 GQVG 440
>gi|375267564|emb|CCD28232.1| regulator of chromosome condensation, partial [Plasmopara viticola]
Length = 287
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 24/246 (9%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P + VV V+CGS H +AL ++G YSWG + GQLG GD +S
Sbjct: 37 PQNIDGLQDEEVVAVSCGSRHTMALAASG--------AVYSWGWGSMGQLGHGDLKSVNI 88
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+ + F Q+ Y ++CG H+A +T ES GL + + H +S
Sbjct: 89 PQKVVFFEQNGLKVNY-ISCGGCHSAAVTKDGTLYMWGESHWGQLGLPKEHEAAH---ES 144
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
V + E +V V CG HT+ +++ G V+ WG L ++ N ++
Sbjct: 145 LPVECPMPEGLTKECIVKVSCGGTHTAALTNHGRVYIWGRGDSGQLGIGSTWFNNTEDES 204
Query: 298 I----SPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ P L+ G NG + VQVACGA H+ VT+ GY ++ W + G+LG G++
Sbjct: 205 LLRTSRPQLLDGFNG------ERVVQVACGAFHSAAVTEKGY-VYIWXKEDYGMLGIGQS 257
Query: 353 IDFFAP 358
D P
Sbjct: 258 SDXQNP 263
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/278 (26%), Positives = 118/278 (42%), Gaps = 62/278 (22%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAP---DSLEDDSKTNHKAPIKICSVKAGGM 82
+ C DGQLG +G+ I+ P D L+D+ ++ +V G
Sbjct: 7 TFGCNDDGQLG-TGAKRRPMLAIDGVSAANFPQNIDGLQDE---------EVVAVSCGSR 56
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF--HGHTVVKVACGSEHVV 140
++A+ +GA++ WG + G L S P V F +G V ++CG H
Sbjct: 57 HTMALAASGAVYSWGWGSM---GQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSA 113
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW---------- 190
A+ +D Y WG ++ GQLGL PK E ++ P
Sbjct: 114 AVT--------KDGTLYMWGESHWGQLGL--------PKEHEAAHESLPVECPMPEGLTK 157
Query: 191 -AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-------QSALVPE 242
+ +V+CG HTA LT+ R + +G G++GQLG G+T +S L
Sbjct: 158 ECIVKVSCGGTHTAALTNHGR--------VYIWGRGDSGQLGIGSTWFNNTEDESLLRTS 209
Query: 243 QVKELPQY--VYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ + L + +V V CG FH++ V+ G V+ W E
Sbjct: 210 RPQLLDGFNGERVVQVACGAFHSAAVTEKGYVYIWXKE 247
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 80/191 (41%), Gaps = 61/191 (31%)
Query: 221 TFGLGENGQLGHGTTQ----------SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
TFG ++GQLG G + +A P+ + L Q +V+V CG HT ++++G
Sbjct: 7 TFGCNDDGQLGTGAKRRPMLAIDGVSAANFPQNIDGL-QDEEVVAVSCGSRHTMALAASG 65
Query: 271 DVWSWGM------------------------EKGL-------GLCPNASLTRN------- 292
V+SWG + GL G C +A++T++
Sbjct: 66 AVYSWGWGSMGQLGHGDLKSVNIPQKVVFFEQNGLKVNYISCGGCHSAAVTKDGTLYMWG 125
Query: 293 -----------EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
E A + + P G + V+V+CG HT +T+ G +++ WGR
Sbjct: 126 ESHWGQLGLPKEHEAAHESLPVECPMPEGLTKECIVKVSCGGTHTAALTNHG-RVYIWGR 184
Query: 342 GRSGVLGTGKT 352
G SG LG G T
Sbjct: 185 GDSGQLGIGST 195
Score = 45.1 bits (105), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 21/124 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----------GFSLVSSFTPSPVWD 123
I V GG + A+ N G +++WG DS G SL+ + P +
Sbjct: 160 IVKVSCGGTHTAALTNHGRVYIWGR---GDSGQLGIGSTWFNNTEDESLLRTSRPQLLDG 216
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F+G VV+VACG+ H A+ G Y W + G LG+G PK +
Sbjct: 217 FNGERVVQVACGAFHSAAVTEKG--------YVYIWXKEDYGMLGIGQSSDXQNPKSASS 268
Query: 184 FNQD 187
F D
Sbjct: 269 FFDD 272
>gi|326522674|dbj|BAJ88383.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1092
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 137/299 (45%), Gaps = 34/299 (11%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT 128
A + I V G + A+ +G L+ WGN + G + VS + P + G
Sbjct: 361 AHMNIELVACGEYHTCAVTLSGDLYTWGNGTF-NFGLSGHGNEVSHWMPKRLNGPLEGIH 419
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + SAG+ +++G + G LG GDR+S P+ +E+
Sbjct: 420 VSSISCGPWHTAVVTSAGQ--------LFTFGDGSFGVLGHGDRQSISVPREVESLKG-- 469
Query: 189 PWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
CG +HTA ++ ++ +T+G G+ G+LGHG ++ LVP V
Sbjct: 470 -LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGDGDKGRLGHGDKETRLVPTCV 528
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPIL 302
L + + V CG T ++++G V++ G + LG N D + P
Sbjct: 529 ASLVEPNF-CQVACGHCFTVALTTSGHVYTMGSSVYGQLG---------NPQADGMVPAR 578
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G F + +++CGA H ++T ++++WG+G +G LG G T D +P +V
Sbjct: 579 VEGK--LHKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRNSPTLV 632
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 108/260 (41%), Gaps = 45/260 (17%)
Query: 116 FTPSPVWDFHGH-TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P P+ +F G V ++CG H + GE Y SWG + G+LG G
Sbjct: 300 LVPKPL-EFAGRLDVQNISCGGRHATLVTKQGEVY--------SWGEESGGRLGHGVDCD 350
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENGQLGH 232
+PK+I+ + V CG +HT +T L +T+G G G GH
Sbjct: 351 VPQPKLIDALAH---MNIELVACGEYHTCAVT--------LSGDLYTWGNGTFNFGLSGH 399
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G S +P+++ + +++ S+ CG +HT+VV+SAG ++++G + G+ +
Sbjct: 400 GNEVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFG-DGSFGVLGHGDRQSI 458
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGR 341
+ + K V+ ACG HT V + K+++WG
Sbjct: 459 SVPREVESL----------KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKIFTWGD 508
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G P V
Sbjct: 509 GDKGRLGHGDKETRLVPTCV 528
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSPV-WDFHGHTVV 130
C V G ++A+ +G ++ G SS G G P+ V H + V
Sbjct: 536 FCQVACGHCFTVALTTSGHVYTMG------SSVYGQLGNPQADGMVPARVEGKLHKNFVE 589
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++CG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 590 EISCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRNSPTLVEALKDKQ-- 639
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V V CG TA + K + + +SMC
Sbjct: 640 -VRSVVCGINFTAAICIHKWVSGVDQSMC 667
>gi|452822986|gb|EME30000.1| E3 ubiquitin-protein ligase HERC1 [Galdieria sulphuraria]
Length = 456
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 98/209 (46%), Gaps = 29/209 (13%)
Query: 157 YSWGANNNGQLGL-GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+WG N +LG G R+ +P++I+ F A+ +V CG HT +L L
Sbjct: 13 YTWGRAKNYRLGRRGTRDDSCQPELIKVFEN---CAIQQVACGGGHTLVL---------L 60
Query: 216 ESMCW-TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
E C +FG + GQLG+GT + + L++V CG +H++ + G V++
Sbjct: 61 EDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFT 120
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG K N L N+ P I+ H P+ ++ CG T +TDDG
Sbjct: 121 WGGGK------NGRLGHNDEQTRTIPCRIT----HLPRAH---KIFCGYHITAAITDDG- 166
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
L++WG G G LG G D + P V++
Sbjct: 167 -LYTWGWGEHGQLGQGSLEDSYGPKKVIF 194
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 74/288 (25%), Positives = 120/288 (41%), Gaps = 49/288 (17%)
Query: 82 MMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
M+ + AL+ WG G + S P + F + +VACG H +
Sbjct: 1 MLRKEYRASSALYTWGRAKNYRLGRRG--TRDDSCQPELIKVFENCAIQQVACGGGHTLV 58
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRP-KIIETFNQDSPWAVYEVTCGS 199
L+ ED +S+G N GQLG G + +S L + I + + + V CG
Sbjct: 59 LL--------EDGCLHSFGYNQYGQLGNGTKVDSPLDASRDISSLSN----KLIAVACGR 106
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
+H+A L + +T+G G+NG+LGH Q+ +P ++ LP+ + CG
Sbjct: 107 YHSAALD--------VNGTVFTWGGGKNGRLGHNDEQTRTIPCRITHLPRAHKIF---CG 155
Query: 260 LFHTSVVSSAG-DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP-- 316
T+ ++ G W WG LG L GP F D
Sbjct: 156 YHITAAITDDGLYTWGWGEHGQLG----------------QGSLEDSYGPKKVIFDDANL 199
Query: 317 --VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q+ACG H ++ T+ G +++WG G LG G+ + ++ ++L
Sbjct: 200 AISQLACGDRHCLVRTESG-DVYTWGSNEFGQLGIGRYNEIYSSPVLL 246
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 88/200 (44%), Gaps = 28/200 (14%)
Query: 80 GGMMSLAIDNAGAL-WMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACGSE 137
G ++ AI + G W WG + G SL S+ P V +D + ++ACG
Sbjct: 155 GYHITAAITDDGLYTWGWG-----EHGQLGQGSLEDSYGPKKVIFDDANLAISQLACGDR 209
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAVYEVT 196
H + +G+ Y +WG+N GQLG+G E P ++ + + V V
Sbjct: 210 HCLVRTESGDVY--------TWGSNEFGQLGIGRYNEIYSSPVLLTSL---AGMMVTFVA 258
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G H+A +T+ +T+G G GQ GHG +P V+ L V+++ V
Sbjct: 259 AGDRHSAAVTN--------TGSLFTWGCGAEGQCGHGDYNDCDMPFLVESLVG-VFILKV 309
Query: 257 DCGLFHTSVVSSAGDVWSWG 276
CG T +S D++ +G
Sbjct: 310 FCGHNFTVALSKDNDIYVFG 329
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 86/379 (22%), Positives = 141/379 (37%), Gaps = 62/379 (16%)
Query: 58 DSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT 117
DS D S+ K+ +V G S A+D G ++ WG G T
Sbjct: 83 DSPLDASRDISSLSNKLIAVACGRYHSAALDVNGTVFTWG------GGKNGRLGHNDEQT 136
Query: 118 PS-PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
+ P H K+ CG H+ A ++ D Y+WG +GQLG G E
Sbjct: 137 RTIPCRITHLPRAHKIFCGY-HITAAIT--------DDGLYTWGWGEHGQLGQGSLEDSY 187
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
PK + D+ A+ ++ CG H + R D+ +T+G E GQLG G
Sbjct: 188 GPKKV--IFDDANLAISQLACGDRHCLV---RTESGDV-----YTWGSNEFGQLGIGRYN 237
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
+ + + V G H++ V++ G +++WG G C + + D
Sbjct: 238 EIYSSPVLLTSLAGMMVTFVAAGDRHSAAVTNTGSLFTWGC-GAEGQCGHG-----DYND 291
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG------ 350
P L+ ++V CG TV ++ D ++ +G G LG G
Sbjct: 292 CDMPFLVE-----SLVGVFILKVFCGHNFTVALSKDN-DIYVFGNNSYGQLGDGSKSSCC 345
Query: 351 --KTIDFFAPAIV----------LWPPLTEEFKQDELNTGGLD---DEIKTKDLEGAEER 395
+ + F P + LW L E+ +++ + D T G +
Sbjct: 346 TPRKLFFSIPGTIDITCGHFHCTLWTTLEEQNEENHVEIRSRTESVDSCTTSSSTGISDE 405
Query: 396 DEKLSSAMEEMKLLQSKLS 414
+ +L E + L KL+
Sbjct: 406 ERRLK---ERISSLNGKLT 421
>gi|57242759|ref|NP_060661.3| RCC1 and BTB domain-containing protein 1 [Homo sapiens]
gi|114649667|ref|XP_001155108.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 3 [Pan
troglodytes]
gi|397476979|ref|XP_003809865.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Pan paniscus]
gi|74751227|sp|Q8NDN9.1|RCBT1_HUMAN RecName: Full=RCC1 and BTB domain-containing protein 1; AltName:
Full=Chronic lymphocytic leukemia deletion region gene 7
protein; Short=CLL deletion region gene 7 protein;
AltName: Full=Regulator of chromosome condensation and
BTB domain-containing protein 1
gi|21739270|emb|CAD38683.1| hypothetical protein [Homo sapiens]
gi|117646918|emb|CAL37574.1| hypothetical protein [synthetic construct]
gi|208965426|dbj|BAG72727.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [synthetic construct]
gi|410208766|gb|JAA01602.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410264076|gb|JAA20004.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410293802|gb|JAA25501.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
gi|410338539|gb|JAA38216.1| regulator of chromosome condensation (RCC1) and BTB (POZ) domain
containing protein 1 [Pan troglodytes]
Length = 531
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P ++ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|354500509|ref|XP_003512342.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Cricetulus
griseus]
gi|344258048|gb|EGW14152.1| RCC1 and BTB domain-containing protein 1 [Cricetulus griseus]
Length = 531
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 94/213 (44%), Gaps = 26/213 (12%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P ++ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +VS+ CG + V +G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTSCLHTKRVVSIACGQTSSMAVLDSGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLV 329
V+ WG N L G+ ++P+ ++ Q Q+ CG AHT+ +
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVAA-------LQSVCVNQIVCGYAHTLAL 248
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
TD+G L++WG G LGTG + +P ++
Sbjct: 249 TDEGL-LYAWGANTYGQLGTGSKNNLLSPTPIM 280
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 141/341 (41%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + +
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTANQPTPRKVTSCLHTK 181
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 182 --RVVSIACGQ------TSSMAVLDSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q V + + CG HT ++ G +++WG L + +SP P
Sbjct: 231 QSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGSKNNLLSPT------P 278
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++ AC + HT G ++ WG RG+S VL T FA
Sbjct: 279 IMVEKERVVEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L D +K K+ + E D +
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA---DSLK-KEFDSPETADLRF 374
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|52353612|gb|AAU44178.1| ptative chromosome condensation factor [Oryza sativa Japonica
Group]
Length = 917
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 44/290 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG +S G +++ S P P+ V V CG H
Sbjct: 32 DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ G+ + +WG ++ G+LG G RE + P+++E+ + V V CG FH
Sbjct: 92 VTRNGDVF--------TWGEDSGGRLGHGTREDSVHPRLVESL---AACNVDFVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHGT +P+++ + + V CG +
Sbjct: 141 TCAVT------TTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + +LT + +SG + VAC
Sbjct: 195 HTALITSMGQLFTFG-DGSFGVLGHGNLTSISCPKEVES--LSG--------LKTIAVAC 243
Query: 322 GAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 244 GVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV 293
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
V G + A+ G L+ WG N L T+ G + + + G V V
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGA----LDGLPVAYV 189
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ H + S G+ +++G + G LG G+ S PK +E+ S
Sbjct: 190 SCGTWHTALITSMGQ--------LFTFGDGSFGVLGHGNLTSISCPKEVESL---SGLKT 238
Query: 193 YEVTCGSFHTA-----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V CG +HTA ++TH + + +T+G G+ +LGHG +S L P V L
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSS--SSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISG 305
Y + V CG T ++++G V S G + LG N D P L+
Sbjct: 297 IDYDFY-RVACGHSLTVCLTTSGKVLSMGNSVYGQLG---------NPNSDGRLPCLVED 346
Query: 306 N--GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G H +QVACG+ H ++T ++++WG+G +G LG G D P V
Sbjct: 347 RIAGEH------VLQVACGSYHVAVLTGRS-EVFTWGKGANGRLGHGDIEDRKVPTQV 397
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 29/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + V G + I + G L+ +G+ G +L S P V G +
Sbjct: 184 LPVAYVSCGTWHTALITSMGQLFTFGDGSF---GVLGHGNLTSISCPKEVESLSGLKTIA 240
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V T+ + ++WG + +LG GD+ESRL+P + +
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID-- 298
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ Y V CG T LT + G GQLG+ + L P V++
Sbjct: 299 -YDFYRVACGHSLTVCLT--------TSGKVLSMGNSVYGQLGNPNSDGRL-PCLVEDRI 348
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+++ V CG +H +V++ +V++WG KG N L + D P +
Sbjct: 349 AGEHVLQVACGSYHVAVLTGRSEVFTWG--KG----ANGRLGHGDIEDRKVPTQVE---- 398
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + +ACGA T +
Sbjct: 399 -ALKDRAVRHIACGANFTAAI 418
>gi|313236433|emb|CBY11750.1| unnamed protein product [Oikopleura dioica]
Length = 2239
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 125/287 (43%), Gaps = 65/287 (22%)
Query: 118 PSPVWDFHGHTVVKVA--CGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
PS V G V ++ GS+ H +A+ +GE ++WG + G+LG G+ E
Sbjct: 1459 PSLVSALQGFIVTHLSSSVGSDGHTLAITESGE--------LFTWGDGDYGKLGHGNSER 1510
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
+ RP+++ET ++ V + CG HTA++T +TFG G+ G+LGHG
Sbjct: 1511 QRRPRLVETLVGET---VVDGCCGYKHTAVVT--------ATGYLYTFGYGDYGRLGHGN 1559
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG-DVWSWGM----EKGLG------- 282
T S P V + + SV CGL HT +S G VW++G + GLG
Sbjct: 1560 TTSKKTPTLVHDCQN---IASVSCGLNHTLALSRDGMTVWAFGDGDFGKLGLGNTLAVQS 1616
Query: 283 -----LCPNASLTRNEAGDAISPIL-ISG----------NGPHGP-------KFQD---- 315
N + G S L I+G NG GP K +
Sbjct: 1617 PNKIAALENVGIKSVHCGHQWSVFLAINGDVYVCGQDAFNGIGGPGQTVIPTKLETINKR 1676
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q++CGA +T+ + +DG +WSWG G +G G P + L
Sbjct: 1677 VFQISCGAEYTLALDEDG-NVWSWGNNSDGQVGCGHFNKVHEPLLTL 1722
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 91/219 (41%), Gaps = 29/219 (13%)
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESR--LRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
E+++G Y WG +GQLGL R P+ +E F+ + + G T L
Sbjct: 1376 ESWRGVKAKAYVWGGVRHGQLGLNMNVGRHCALPRRLEAFDN-----MQTIELGLNCTFL 1430
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV--YLVSVDCGLFH 262
+ + G G G+LGHG + VP V L ++ +L S H
Sbjct: 1431 CS--------ASGAVTSTGEGSYGRLGHGNSDDLSVPSLVSALQGFIVTHLSSSVGSDGH 1482
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
T ++ +G++++WG + G + + R + ++ + V CG
Sbjct: 1483 TLAITESGELFTWG-DGDYGKLGHGNSERQRRPRLVETLV----------GETVVDGCCG 1531
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT +VT GY L+++G G G LG G T P +V
Sbjct: 1532 YKHTAVVTATGY-LYTFGYGDYGRLGHGNTTSKKTPTLV 1569
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 84/241 (34%), Gaps = 71/241 (29%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+LAI +G L+ WG+ D G + P V G TVV CG +H +
Sbjct: 1483 TLAITESGELFTWGDG---DYGKLGHGNSERQRRPRLVETLVGETVVDGCCGYKHTAVVT 1539
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G Y++G + G+LG G+ S+ P ++ + V+CG HT
Sbjct: 1540 ATG--------YLYTFGYGDYGRLGHGNTTSKKTPTLVHDCQN-----IASVSCGLNHTL 1586
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY------------V 251
L+ W FG G+ G+LG G T + P ++ L V
Sbjct: 1587 ALSRDGM-------TVWAFGDGDFGKLGLGNTLAVQSPNKIAALENVGIKSVHCGHQWSV 1639
Query: 252 YLV------------------------------------SVDCGLFHTSVVSSAGDVWSW 275
+L + CG +T + G+VWSW
Sbjct: 1640 FLAINGDVYVCGQDAFNGIGGPGQTVIPTKLETINKRVFQISCGAEYTLALDEDGNVWSW 1699
Query: 276 G 276
G
Sbjct: 1700 G 1700
>gi|357133876|ref|XP_003568548.1| PREDICTED: uncharacterized protein LOC100838586 [Brachypodium
distachyon]
Length = 1090
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 136/299 (45%), Gaps = 34/299 (11%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHT 128
A + I V G + A+ +G L+ WGN + G + VS + P + G
Sbjct: 361 AHMNIELVACGEYHTCAVTLSGDLYTWGNGTF-NFGLLGHGNEVSHWMPKRLNGPLEGIH 419
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + SAG+ +++G + G LG GDR+S P+ +E+
Sbjct: 420 VSSISCGPWHTAVVTSAGQ--------LFTFGDGSFGVLGHGDRQSLSVPREVESLKG-- 469
Query: 189 PWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
CG +HTA ++ ++ +T+G G+ G+LGHG + LVP V
Sbjct: 470 -LRTVRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGDGDKGRLGHGDKDTRLVPTCV 528
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPIL 302
L + + V CG T ++++G V++ G + LG N D + P
Sbjct: 529 ASLVEPNF-CQVACGHCFTVALTTSGHVYTMGSSVYGQLG---------NPQADGMVPAR 578
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G F + +++CGA H ++T ++++WG+G +G LG G T D +P +V
Sbjct: 579 VEGK--LHKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDRNSPTLV 632
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/260 (26%), Positives = 112/260 (43%), Gaps = 49/260 (18%)
Query: 118 PSPVWDFHGHTVVK-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
P P+ +F G V+ ++CG H + GE Y SWG + G+LG G
Sbjct: 302 PKPL-EFAGRLDVQNISCGGRHATLVTKQGEVY--------SWGEESGGRLGHGVDCDVP 352
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENGQLGHGT 234
+PK++E + V CG +HT +T L +T+G G G LGHG
Sbjct: 353 QPKLVEALAH---MNIELVACGEYHTCAVT--------LSGDLYTWGNGTFNFGLLGHGN 401
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRN 292
S +P+++ + +++ S+ CG +HT+VV+SAG ++++G LG SL+
Sbjct: 402 EVSHWMPKRLNGPLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGSFGVLGHGDRQSLSVP 461
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGR 341
+++ + V+ ACG HT V + K+++WG
Sbjct: 462 REVESLKGLRT-------------VRAACGVWHTAAVVEVMVGNSSTSNCSSGKIFTWGD 508
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G P V
Sbjct: 509 GDKGRLGHGDKDTRLVPTCV 528
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSPV-WDFHGHTVV 130
C V G ++A+ +G ++ G SS G G P+ V H + V
Sbjct: 536 FCQVACGHCFTVALTTSGHVYTMG------SSVYGQLGNPQADGMVPARVEGKLHKNFVE 589
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++CG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 590 EISCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRNSPTLVEALKDKQ-- 639
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V V CG TA + K + + +SMC
Sbjct: 640 -VRSVVCGINFTAAICIHKWVSGVDQSMC 667
>gi|242038901|ref|XP_002466845.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
gi|241920699|gb|EER93843.1| hypothetical protein SORBIDRAFT_01g015100 [Sorghum bicolor]
Length = 485
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 117/283 (41%), Gaps = 74/283 (26%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG EH A+ S G + +WGAN GQLG G ES PK +++ +
Sbjct: 65 IACGREHTAAVASDGSLF--------TWGANEFGQLGDGTEESAKEPKKVKSLETE---F 113
Query: 192 VYEVTCGSFHTALLTH-RKRPNDMLESMCWTFG--------------------------- 223
V V+CG+ TA + R+ + +S W +G
Sbjct: 114 VKSVSCGAHCTAAVAEPRENDGTVSKSRLWVWGQNQGSDYPRLFWGAFTPNTVIKQVSCG 173
Query: 224 ------------------LGENGQLGHGTTQSALVPEQV--------KELPQYVYLVSVD 257
E GQLG G T L +V + P+ V +V V
Sbjct: 174 AVHVMALSEDGLLQAWGSYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVS 233
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG +HT+ +S G+V++WG+ +G + SL + + + P I G +D
Sbjct: 234 CGEYHTAAISENGEVYTWGLGS-MGQLGHCSLQSGD--NELIPRRIV--ALDGIVVRD-- 286
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
V+CG H+ VT+ G L++WG G G LG G FF+ ++
Sbjct: 287 -VSCGGVHSCAVTESG-ALYAWGGGHVGQLGVGPQGGFFSCSL 327
Score = 66.2 bits (160), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 97/223 (43%), Gaps = 48/223 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR------PKIIETFNQDS-PWAVYEVTCGSFHTALLTHRK 209
Y WG N++GQ +E LR PK+ + N S W ++ CG HTA +
Sbjct: 22 YIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGKSLRWT--DIACGREHTAAVAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G E GQLG GT +SA P++VK L + ++ SV CG T+ V+
Sbjct: 78 ------DGSLFTWGANEFGQLGDGTEESAKEPKKVKSL-ETEFVKSVSCGAHCTAAVAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G + P L G + QV+
Sbjct: 131 RENDGTVSKSRLWVWGQNQG----------------SDYPRLFWGAFTPNTVIK---QVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGR-GRSGVLGTGKTIDFFAPAIVL 362
CGA H + +++DG L +WG G LG G+T A VL
Sbjct: 172 CGAVHVMALSEDGL-LQAWGSYNEYGQLGRGRTSQGLQGARVL 213
Score = 45.4 bits (106), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/162 (27%), Positives = 66/162 (40%), Gaps = 35/162 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG---LGDRESRLRPKIIETFN 185
+V+V+CG H A+ GE Y +WG + GQLG L ++ L P+ I +
Sbjct: 229 IVRVSCGEYHTAAISENGEVY--------TWGLGSMGQLGHCSLQSGDNELIPRRIVALD 280
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----------- 234
V +V+CG H+ +T + +G G GQLG G
Sbjct: 281 GI---VVRDVSCGGVHSCAVTE--------SGALYAWGGGHVGQLGVGPQGGFFSCSLNG 329
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ L V +P V L + CG HT V G ++ WG
Sbjct: 330 SDMLLRNIPVLVIPSGVRLAT--CGHSHTLVSMKDGRIYGWG 369
>gi|222629908|gb|EEE62040.1| hypothetical protein OsJ_16822 [Oryza sativa Japonica Group]
Length = 841
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 44/290 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG +S G +++ S P P+ V V CG H
Sbjct: 32 DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ G+ + +WG ++ G+LG G RE + P+++E+ + V V CG FH
Sbjct: 92 VTRNGDVF--------TWGEDSGGRLGHGTREDSVHPRLVESL---AACNVDFVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHGT +P+++ + + V CG +
Sbjct: 141 TCAVT------TTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + +LT + +SG + VAC
Sbjct: 195 HTALITSMGQLFTFG-DGSFGVLGHGNLTSISCPKEVES--LSG--------LKTIAVAC 243
Query: 322 GAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 244 GVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV 293
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
V G + A+ G L+ WG N L T+ G + + + G V V
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGA----LDGLPVAYV 189
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ H + S G+ + ++G + G LG G+ S PK +E+ S
Sbjct: 190 SCGTWHTALITSMGQLF--------TFGDGSFGVLGHGNLTSISCPKEVESL---SGLKT 238
Query: 193 YEVTCGSFHTA-----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V CG +HTA ++TH + + +T+G G+ +LGHG +S L P V L
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSS--SSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISG 305
Y + V CG T ++++G V S G + LG N D P L+
Sbjct: 297 IDYDFY-RVACGHSLTVCLTTSGKVLSMGNSVYGQLG---------NPNSDGRLPCLVED 346
Query: 306 N--GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G H +QVACG+ H ++T ++++WG+G +G LG G D P V
Sbjct: 347 RIAGEH------VLQVACGSYHVAVLTGRS-EVFTWGKGANGRLGHGDIEDRKVPTQV 397
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 107/261 (40%), Gaps = 29/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + V G + I + G L+ +G+ G +L S P V G +
Sbjct: 184 LPVAYVSCGTWHTALITSMGQLFTFGDGSF---GVLGHGNLTSISCPKEVESLSGLKTIA 240
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V T+ + ++WG + +LG GD+ESRL+P + +
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID-- 298
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ Y V CG T LT + G GQLG+ + L P V++
Sbjct: 299 -YDFYRVACGHSLTVCLT--------TSGKVLSMGNSVYGQLGNPNSDGRL-PCLVEDRI 348
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+++ V CG +H +V++ +V++WG KG N L + D P +
Sbjct: 349 AGEHVLQVACGSYHVAVLTGRSEVFTWG--KG----ANGRLGHGDIEDRKVPTQVE---- 398
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + +ACGA T +
Sbjct: 399 -ALKDRAVRHIACGANFTAAI 418
>gi|348682416|gb|EGZ22232.1| hypothetical protein PHYSODRAFT_330063 [Phytophthora sojae]
Length = 2101
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 111/243 (45%), Gaps = 43/243 (17%)
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG EH +A+ ++G DL + WG G+LG G+ S L P + +
Sbjct: 1810 SCGREHTMAVTASG------DLFGFGWG--EAGRLGTGETGSSLYPTRVTDLQN-----I 1856
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG HT LT + R + FG G G+LG+G+ +P V+ L Y
Sbjct: 1857 AAVACGREHTLALTRKGR--------VFAFGAGFGGRLGNGSETDEELPFAVQGLEDY-R 1907
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI----SGNGP 308
+ ++D G H+ +S+ GDV +W G + +L + + + P I +GN
Sbjct: 1908 IAAIDAGECHSCALSTEGDVLTW------GFGSSGALGHGDRDNCLEPRRIEGPWTGNAI 1961
Query: 309 HGPKFQDP-----VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF-APAIVL 362
G + Q +ACG+ HT+ T DG L+ WG +G L ++++ AP +V+
Sbjct: 1962 DGEENQASETSVVSAIACGSYHTLAATSDG-ALYGWGDAAAGQL----SVEYITAPEMVV 2016
Query: 363 WPP 365
P
Sbjct: 2017 LTP 2019
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 79/178 (44%), Gaps = 30/178 (16%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V ++ CG HTAL+T + +TFG GE G+LGHG + P V +
Sbjct: 1745 VVQIACGYRHTALITDDRH--------LYTFGHGECGRLGHGNQEDCTEPVSVGYFTSLI 1796
Query: 252 --------YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
+V V CG HT V+++GD++ G G L E G ++ P +
Sbjct: 1797 EAEGVDVGGVVEVSCGREHTMAVTASGDLF------GFGWGEAGRLGTGETGSSLYPTRV 1850
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ VACG HT+ +T G +++++G G G LG G D P V
Sbjct: 1851 T-------DLQNIAAVACGREHTLALTRKG-RVFAFGAGFGGRLGNGSETDEELPFAV 1900
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 107/275 (38%), Gaps = 53/275 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
I +V G +LA+ G ++ +G G S P V + + +
Sbjct: 1856 IAAVACGREHTLALTRKGRVFAFGAG---FGGRLGNGSETDEELPFAVQGLEDYRIAAID 1912
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE----------T 183
G H AL + G+ +WG ++G LG GDR++ L P+ IE
Sbjct: 1913 AGECHSCALSTEGD--------VLTWGFGSSGALGHGDRDNCLEPRRIEGPWTGNAIDGE 1964
Query: 184 FNQDSPWAVYE-VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
NQ S +V + CGS+HT T + + +G GQL + + PE
Sbjct: 1965 ENQASETSVVSAIACGSYHTLAATS--------DGALYGWGDAAAGQL---SVEYITAPE 2013
Query: 243 QVKELPQYVY------LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
V PQ + + SV CG F ++V ++ G ++ WG P E D
Sbjct: 2014 MVVLTPQRIRVPTNSGIRSVACGTFTSAVCTNQGHLFLWGSPAAGNGAP------LEVDD 2067
Query: 297 A-ISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
A + I + G QVACGA H V +T
Sbjct: 2068 ARVKRIGVLGEFEFS-------QVACGAYHAVAIT 2095
>gi|115485835|ref|NP_001068061.1| Os11g0545800 [Oryza sativa Japonica Group]
gi|113645283|dbj|BAF28424.1| Os11g0545800, partial [Oryza sativa Japonica Group]
Length = 400
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 131/314 (41%), Gaps = 66/314 (21%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-----LVSSFTPSPVWDFHGH 127
K+ V AG S A+ G L+ WG +SS + G +VS TP V
Sbjct: 101 KVVEVSAGNHHSCAVTADGKLFAWGR----NSSGQLGLGKRAGKVVS--TPRKVDCLADA 154
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL---------RP 178
V VA GSEH +A GE SWGA G+LG G + S L P
Sbjct: 155 RVKMVALGSEHSIATTEEGEVL--------SWGAAGAGRLGHGHKTSILGFSITTSEYTP 206
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
++I+ + + + G H+A + + F G+ + G G +
Sbjct: 207 RLIKNLDG---VKIKRIAAGMLHSACIDEKGT----------LFIFGQKTEKGFGRSGDE 253
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
L P V+E+P + V CG +HT VV+ +GD++SWG + N L
Sbjct: 254 LRPTVVEEVP---FSEEVACGGYHTCVVTDSGDLYSWGSNE------NGCLGLGGTDMVR 304
Query: 299 SPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWG--------RGRS--GVL 347
SP ++ + F+ PV +V+CG HT +++ W WG G S G L
Sbjct: 305 SPEVLKSS-----LFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQL 359
Query: 348 GTGKTIDFFAPAIV 361
G G +D+F P +V
Sbjct: 360 GHGNDVDYFEPMMV 373
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVV 130
+KI + AG + S ID G L+++G TE GF P+ V +
Sbjct: 215 VKIKRIAAGMLHSACIDEKGTLFIFGQ------KTEKGFGRSGDELRPTVVEEVP--FSE 266
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + +G+ YSWG+N NG LGLG + P+++++ P
Sbjct: 267 EVACGGYHTCVVTDSGD--------LYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFP- 317
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTF---GLGENGQLGHGTTQSALVPEQVKEL 247
V +V+CG HTA+++ TF G GQLGHG P V E
Sbjct: 318 -VSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV-EF 375
Query: 248 PQYVYLVSVDCGLFHTSVV 266
+ V V CG HT +
Sbjct: 376 GKNARAVHVSCGFNHTGAI 394
>gi|218191372|gb|EEC73799.1| hypothetical protein OsI_08500 [Oryza sativa Indica Group]
Length = 988
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 44/314 (14%)
Query: 59 SLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL------ 112
S+ D A ++ ++ G + A+ +G L+ WG EG L
Sbjct: 254 SVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG---------EGTHCLGLWGDQ 304
Query: 113 --VSSFTPSPVW-DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S + P ++ G +++K+ACG H + SAG+ + ++G G LG
Sbjct: 305 YQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQIF--------TYGDGTFGVLGH 356
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR--KRPNDMLESMCWTFGLGEN 227
GD + RPK +E+ A+ CG +HTA + R ++ +T+G +
Sbjct: 357 GDTLTVARPKQVESLKGVRAKAI---ACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADR 413
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
G+LGH + LVP V+ L + + V C T V++ G V++ G ++ L
Sbjct: 414 GKLGHADKKMKLVPTCVEPLNDFDF-AQVSCAKAQTIVLTITGVVFTIGSKEHGRLG--- 469
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
N + S LI GP +F +++ G++H ++T +G K+++WG+G G L
Sbjct: 470 ----NPLSEDTSICLI--EGPLKTEFVR--EISSGSSHIAVLTMNG-KVFTWGKGTEGQL 520
Query: 348 GTGKTIDFFAPAIV 361
G G +D P +V
Sbjct: 521 GLGDYVDRSYPTLV 534
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 46/282 (16%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
+++WG P + G S + P + H V VACG +H + GE +
Sbjct: 182 IFVWGEVP-GNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVF--- 237
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
SWG +N G+LG S PKIIE+ + V + G+ HT ++
Sbjct: 238 -----SWGVDNGGRLGHKVSVSVSDPKIIESL---ASTRVKAIAFGAKHTCAVS------ 283
Query: 213 DMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ + +G G + G G +S P ++ + ++ + CG +HT+++SSAG
Sbjct: 284 --ISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 341
Query: 271 DVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
++++ G LG ++ R + +++ + +ACG HT
Sbjct: 342 QIFTYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-------------IACGPWHTAA 388
Query: 329 VTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + KL++WG G LG P V
Sbjct: 389 IVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCV 430
Score = 43.5 bits (101), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 12/81 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +++ GS H+ L G+ + +WG GQLGLGD R P ++E
Sbjct: 490 VREISSGSSHIAVLTMNGKVF--------TWGKGTEGQLGLGDYVDRSYPTLVEALEDKQ 541
Query: 189 PWAVYEVTCG-SFHTALLTHR 208
V+ + CG +F A+ HR
Sbjct: 542 ---VHSIACGFNFTMAICLHR 559
Score = 42.7 bits (99), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 60/265 (22%), Positives = 94/265 (35%), Gaps = 57/265 (21%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I I + G + I +AG ++ +G+ G ++ P V G
Sbjct: 322 ISILKIACGHWHTAIISSAGQIFTYGDGTF---GVLGHGDTLTVARPKQVESLKGVRAKA 378
Query: 132 VACGSEHVVALVSAGETYKGE--DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ACG H A+V T K ++WG + G+LG D++ +L P +E N
Sbjct: 379 IACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLND--- 435
Query: 190 WAVYEVTCGSFHTALLT------------HRKRPNDMLE--SMC---------------- 219
+ +V+C T +LT H + N + E S+C
Sbjct: 436 FDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISS 495
Query: 220 --------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+T+G G GQLG G P V+ L + S+ CG T
Sbjct: 496 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDK-QVHSIACGFNFTMA 554
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLT 290
+ + S K +C N LT
Sbjct: 555 ICLHRPLSS----KDQSVCSNCQLT 575
>gi|296083663|emb|CBI23652.3| unnamed protein product [Vitis vinifera]
Length = 1062
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVK 131
V G + A+ +G L+ WG N L TE VS + P V G V+
Sbjct: 321 VACGEYHTCAVSTSGDLFTWGDGTHNAGLLGHGTE-----VSHWIPKRVSGPLEGLQVLS 375
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ H S G+ +++G G LG GDRES P+ ++ S
Sbjct: 376 VACGTWHSALATSNGK--------LFTFGDGTFGVLGHGDRESVPYPREVQIL---SGLK 424
Query: 192 VYEVTCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+V CG +HTA + + ++ +T+G G+ +LGHG+ ++ L+P V L
Sbjct: 425 TIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALID 484
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
Y + + CG T ++++G V++ G L N D P L+
Sbjct: 485 YNFH-QLACGHTMTVALTTSGHVFTMGGTAYGQLG-------NPLSDGRLPCLV------ 530
Query: 310 GPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CGA H ++T ++++WGRG +G LG G T D +P V
Sbjct: 531 ----QDKLVGEFVEEISCGAYHVAVLTSRS-EVFTWGRGANGRLGHGDTEDRRSPTFV 583
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 105/240 (43%), Gaps = 37/240 (15%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ACG HV + GE + +WG + G+LG G RP ++E ++
Sbjct: 268 EIACGVRHVALVTRQGEVF--------TWGEESGGRLGHGIDNDFSRPHLVEFLAVNN-- 317
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V CG +HT ++ D+ W G G LGHGT S +P++V +
Sbjct: 318 -VDFVACGEYHTCAVS---TSGDLF---TWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEG 370
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ ++SV CG +H+++ +S G ++++G + G+ + R ++SG
Sbjct: 371 LQVLSVACGTWHSALATSNGKLFTFG-DGTFGVLGHGD--RESVPYPREVQILSG----- 422
Query: 311 PKFQDPVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++VACG HT + + KL++WG G LG G + P V
Sbjct: 423 ---LKTIKVACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCV 479
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 80/178 (44%), Gaps = 31/178 (17%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D G S + P+ V + ++ACG VAL ++G +
Sbjct: 454 LFTWGDG---DKHRLGHGSKETYLLPTCVSALIDYNFHQLACGHTMTVALTTSGHVF--- 507
Query: 153 DLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ G GQLG + RL + K++ F V E++CG++H A+LT R
Sbjct: 508 -----TMGGTAYGQLGNPLSDGRLPCLVQDKLVGEF-------VEEISCGAYHVAVLTSR 555
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NG+LGHG T+ P V+ L + S+ CG T+ +
Sbjct: 556 --------SEVFTWGRGANGRLGHGDTEDRRSPTFVEALKDR-NVKSISCGSNFTASI 604
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEH 138
G M++A+ +G ++ G + + G L P V D G V +++CG+ H
Sbjct: 493 GHTMTVALTTSGHVFTMGGT----AYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYH 548
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
V L S E + +WG NG+LG GD E R P +E + V ++CG
Sbjct: 549 VAVLTSRSEVF--------TWGRGANGRLGHGDTEDRRSPTFVEALKDRN---VKSISCG 597
Query: 199 SFHTALLTHRKRPNDMLESMC 219
S TA + K + +S+C
Sbjct: 598 SNFTASICIHKWVSGADQSVC 618
Score = 47.0 bits (110), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 56/126 (44%), Gaps = 14/126 (11%)
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P+ ++ L + CG+ H ++V+ G+V++WG E G L D P
Sbjct: 254 PDDIESLGDVYVWGEIACGVRHVALVTRQGEVFTWGEESG------GRLGHGIDNDFSRP 307
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAP 358
L+ + F VACG HT V+ G L++WG G +G+LG G + + P
Sbjct: 308 HLVEFLAVNNVDF-----VACGEYHTCAVSTSG-DLFTWGDGTHNAGLLGHGTEVSHWIP 361
Query: 359 AIVLWP 364
V P
Sbjct: 362 KRVSGP 367
>gi|221485260|gb|EEE23541.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii GT1]
Length = 1205
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 56/275 (20%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIE 182
F +V +VA G H + + KG+ + WG N + LG+G + R+ P ++
Sbjct: 43 FGPASVKRVALGLYHTLVV-----GLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVP 97
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHR-KRPNDMLESMCWTFGLGENGQLGHGTTQSALV- 240
F S +EV+CG+ ++A+L R ++P + +TFGLG G+LG+ ++ V
Sbjct: 98 FF---SKMGTFEVSCGTNNSAVLVKRAQQPGGKV----YTFGLGNRGRLGYPKNKADGVA 150
Query: 241 --------------PEQVKELPQYVY------LVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
P P V + + CG HT +S G +++WG+
Sbjct: 151 GYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGS- 209
Query: 281 LGLCPNASLTRNEAGDAISPILI-----SGNGPH------GPKFQDPVQVAC---GAAHT 326
+L + + D+ +P+ + +G+G G DPV V C GA H+
Sbjct: 210 -----YGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHS 264
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ T DG LW+WG G +G LG G +PA+V
Sbjct: 265 MACTSDG-TLWTWGHGGNGRLGLGHNRGSLSPAVV 298
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 139/323 (43%), Gaps = 76/323 (23%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPV-WDFHGHTVVK 131
S++ G ++A+ AGA+W+WG S+ +G L V PV + + +
Sbjct: 504 SLECGESHTIALTGAGAVWVWG------SNDDGQLGLGEDVEEDQYEPVKLECFSTPIRR 557
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS+H +A+ G+ + +WGAN+NGQLGLG P + Q
Sbjct: 558 IACGSKHCLAVAQYGDVF--------AWGANDNGQLGLGVVRPSFEPAAVTALRQ----- 604
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESM------CWTFGLGENGQLGHG---TTQSALVPE 242
+V CG ++A +T + W +G E+G+LG G + S L P+
Sbjct: 605 AVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQ 664
Query: 243 QVK-------------ELPQY--VYLVSVD---CGLFHTSVVSSAGDVWSWGM----EKG 280
+V E+ Y V+ VS G H+ +++ G+ ++WG G
Sbjct: 665 KVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLG 724
Query: 281 LGLCPNA-SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
+G NA + TR + P G + + VA GA H++ ++ DG LW W
Sbjct: 725 IGTTANAYTPTRCDF-------------PKGVRLRS---VAAGACHSLALSMDG-DLWFW 767
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL 362
GR T T ++ +P I +
Sbjct: 768 GRRED----TCSTTNYMSPRIFM 786
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 132/333 (39%), Gaps = 84/333 (25%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF------TPSPVWDFHGH 127
I V AG S ID G L+ WG+ GGF + P V F G
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGS---------GGFGRLGHGDQGEIPVPRKVEGFGGV 356
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQ 186
V++VACG+ H +AL T+KG ++WGA LG G+ E + +
Sbjct: 357 PVLQVACGTFHTLAL-----THKG---TVFAWGAGL--ALGFGEGEDGSGGMVAVPKHLS 406
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D AV + G +H+A +T D+L +G+G + +LGHG Q+ P+ V +
Sbjct: 407 DIEAAVLNIAAGPYHSAAVT---VGGDLL-----VWGVGGSSRLGHGDQQNQPFPKYVAD 458
Query: 247 LPQYVY-------------------------------------LVSVDCGLFHTSVVSSA 269
L +Y L S++CG HT ++ A
Sbjct: 459 LRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGA 518
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVL 328
G VW WG L L + D P+ + F P+ ++ACG+ H +
Sbjct: 519 GAVWVWGSNDDGQL----GLGEDVEEDQYEPVKLE-------CFSTPIRRIACGSKHCLA 567
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V G +++WG +G LG G F PA V
Sbjct: 568 VAQYG-DVFAWGANDNGQLGLGVVRPSFEPAAV 599
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/304 (27%), Positives = 123/304 (40%), Gaps = 48/304 (15%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW- 122
S+ + KI + G +LA+ + GAL+ WG + G S+TP V+
Sbjct: 173 SRVRFRDKCKIARISCGADHTLALSDEGALYAWG---VGSYGNLGQGDTSDSYTPVRVYL 229
Query: 123 ---DFHGHTVVKVACGSEH----VVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDR 172
G V G VV SAG + D ++WG NG+LGLG
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVVVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289
Query: 173 ESRLRPKIIE-TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
L P +++ ++D + V G H+A + + + +T+G G G+LG
Sbjct: 290 RGSLSPAVVDYILDRD----IVFVNAGDSHSACIDR--------QGVLYTWGSGGFGRLG 337
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG VP +V+ V ++ V CG FHT ++ G V++WG LG
Sbjct: 338 HGDQGEIPVPRKVEGFGG-VPVLQVACGTFHTLALTHKGTVFAWGAGLALGF-------- 388
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQ-----VACGAAHTVLVTDDGYKLWSWGRGRSGV 346
E D SG PK ++ +A G H+ VT G L WG G S
Sbjct: 389 GEGEDG------SGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG-DLLVWGVGGSSR 441
Query: 347 LGTG 350
LG G
Sbjct: 442 LGHG 445
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 115/269 (42%), Gaps = 61/269 (22%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD--RESRLRPKIIETFN 185
T+ + CG H +AL AG + WG+N++GQLGLG+ E + P +E F+
Sbjct: 501 TLQSLECGESHTIALTGAG--------AVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS 552
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ + CGS H + + +G +NGQLG G + + P V
Sbjct: 553 T----PIRRIACGSKHCLAVAQYGD--------VFAWGANDNGQLGLGVVRPSFEPAAVT 600
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSA--------------GDVWSWGMEKG--LGLCPNASL 289
L Q V V CG +++ ++S GD+W+WG + LGL + +
Sbjct: 601 ALRQ---AVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVA- 656
Query: 290 TRNEAGDAISPILISGNGP------HGPKFQDPVQVAC--------GAAHTVLVTDDGYK 335
+G ++P + + P + Q +V C G +H++ +T G +
Sbjct: 657 ----SGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQG-E 711
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
++WG G G LG G T + + P +P
Sbjct: 712 CYAWGAGYYGRLGIGTTANAYTPTRCDFP 740
Score = 40.8 bits (94), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 21/145 (14%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L IG + ++ + +++ SV AG SLA+ G LW WG E S
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGR-------REDTCS 775
Query: 112 LVSSFTPSPVWDFHGH----TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
+ +P G V ++ H +A+ AGE ++WG N Q
Sbjct: 776 TTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEV--------FAWGDNKLYQT 827
Query: 168 GLGDRES-RL-RPKIIETFNQDSPW 190
G G R++ RL RP+ + W
Sbjct: 828 GCGKRQAERLDRPERVAGLPSACQW 852
Score = 38.1 bits (87), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 111/299 (37%), Gaps = 88/299 (29%)
Query: 60 LEDDSKTNHKAPIK-------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L +D + + P+K I + G LA+ G ++ WG + + + G +
Sbjct: 534 LGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWG----ANDNGQLGLGV 589
Query: 113 VS-SFTPSPVWDFHGHTVVKVACGSEHVVALVSAG--ETYKGE------DLVCYSWGANN 163
V SF P+ V V V CG ++ + S G ++ GE DL ++WGA
Sbjct: 590 VRPSFEPAAVTALR--QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDL--WAWGAAE 645
Query: 164 NGQLGLGD---RESRLRPKIIE--------TFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+G+LGLG+ S L P+ + + + A V C SF
Sbjct: 646 SGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLA 705
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL------------VSVDCGL 260
+ C+ +G G G+LG GTT +A P + + P+ V L +S+D L
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRC-DFPKGVRLRSVAAGACHSLALSMDGDL 764
Query: 261 F----------------------------------------HTSVVSSAGDVWSWGMEK 279
+ H+ V+ AG+V++WG K
Sbjct: 765 WFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNK 823
>gi|242089177|ref|XP_002440421.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
gi|241945706|gb|EES18851.1| hypothetical protein SORBIDRAFT_09g000710 [Sorghum bicolor]
Length = 916
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 124/292 (42%), Gaps = 46/292 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG S G +++SS P P+ V V CG +H
Sbjct: 32 DSLGDVYVWGEVVCDTSVRTGSDTVISSTGRTDILLPKPLESNLVLDVYHVDCGVKHAAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
++ GE + +WG ++ G+LG G RE +RP+++E+ + V V CG FH
Sbjct: 92 VMKNGEVF--------TWGEDSGGRLGHGTREDCVRPRLVESLTVSN---VDFVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHG +P++V + + + V CG +
Sbjct: 141 TCAVT------TTGELYSWGDGTHNVGLLGHGNDVGHWIPKRVSGALEGLQVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + L + +SG + VAC
Sbjct: 195 HTALITSMGQLFTFG-DGSFGVLGHGDLKSVSYPREVES--LSG--------LKTIAVAC 243
Query: 322 GAAHT-----VLVTDDGY-------KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 244 GVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCV 295
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 107/264 (40%), Gaps = 33/264 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ V G + I + G L+ +G+ G L S P V G +
Sbjct: 184 LQVAYVSCGTWHTALITSMGQLFTFGDGSF---GVLGHGDLKSVSYPREVESLSGLKTIA 240
Query: 132 VACGSEHVVALVSAGETYKGEDLVC-----YSWGANNNGQLGLGDRESRLRPKIIETF-N 185
VACG H A+V T + ++WG + +LG GD+E+RL+P + T +
Sbjct: 241 VACGVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCVATLID 300
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
D Y V CG T LT + G GQLG+ + +P V+
Sbjct: 301 HD----FYRVACGHSLTVALT--------TSGQVLSMGNAVYGQLGNPHSD-GRIPCLVE 347
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+ ++ + CG +H +V++ +V++WG KG N L + D P L+
Sbjct: 348 DKIVGEQVIQIACGSYHVAVLTGRNEVFTWG--KG----ANGRLGHGDIEDRKVPTLVEV 401
Query: 306 NGPHGPKFQDPVQVACGAAHTVLV 329
++ +ACGA T +
Sbjct: 402 LKDRAVRY-----IACGANFTAAI 420
>gi|357137056|ref|XP_003570117.1| PREDICTED: uncharacterized protein LOC100825305 isoform 2
[Brachypodium distachyon]
Length = 940
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 82/303 (27%), Positives = 137/303 (45%), Gaps = 52/303 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL--------VSSFTPSPVWD-F 124
+ ++ G + A+ +G L+ WG EG SL S + P ++
Sbjct: 257 VKAIAFGAKHTCALAISGELFEWG---------EGTHSLGVWDDQCQRSQWYPHKLFGPL 307
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G +VVK+ACG H + S+G+ + ++G G LG GD S RPK +E+
Sbjct: 308 EGVSVVKMACGQWHTAIISSSGQLF--------TYGDGTFGVLGHGDTSSVARPKEVESL 359
Query: 185 NQDSPWAVYEVTCGSFHTALLTH------RKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
V V CG +HTA + P+ L +T+G + G+LGH +S
Sbjct: 360 K---GLRVKAVACGPWHTAAIVEILGTVKSNAPSGKL----FTWGDADRGKLGHSDKESK 412
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
LVP VK L + V C T ++ G V++ G ++ + L + D+
Sbjct: 413 LVPTCVKALTDSDF-AQVSCAKALTVALTITGVVFTIGSKE------HGQLGSHRLDDSS 465
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ S GP +F +++ G++H ++T +G K+++WG+G G LG G +D +P
Sbjct: 466 ---ICSVEGPLKTEFVR--EISSGSSHVAVLTMNG-KVFTWGKGTEGQLGLGNYVDRSSP 519
Query: 359 AIV 361
+V
Sbjct: 520 TLV 522
Score = 42.0 bits (97), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 57/247 (23%), Positives = 85/247 (34%), Gaps = 65/247 (26%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + + G + I ++G L+ +G+ G S P V G V
Sbjct: 310 VSVVKMACGQWHTAIISSSGQLFTYGDGTF---GVLGHGDTSSVARPKEVESLKGLRVKA 366
Query: 132 VACGSEHVVALVSAGETYKGE--DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
VACG H A+V T K ++WG + G+LG D+ES+L P ++ DS
Sbjct: 367 VACGPWHTAAIVEILGTVKSNAPSGKLFTWGDADRGKLGHSDKESKLVPTCVKALT-DSD 425
Query: 190 WA--------------------------------------------------VYEVTCGS 199
+A V E++ GS
Sbjct: 426 FAQVSCAKALTVALTITGVVFTIGSKEHGQLGSHRLDDSSICSVEGPLKTEFVREISSGS 485
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
H A+LT + +T+G G GQLG G P V+ L + S+ CG
Sbjct: 486 SHVAVLT--------MNGKVFTWGKGTEGQLGLGNYVDRSSPTLVEALEDK-QVDSIACG 536
Query: 260 LFHTSVV 266
T V
Sbjct: 537 SNFTVAV 543
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 37/81 (45%), Gaps = 12/81 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +++ GS HV L G+ + +WG GQLGLG+ R P ++E
Sbjct: 478 VREISSGSSHVAVLTMNGKVF--------TWGKGTEGQLGLGNYVDRSSPTLVEALEDKQ 529
Query: 189 PWAVYEVTCGS-FHTALLTHR 208
V + CGS F A+ HR
Sbjct: 530 ---VDSIACGSNFTVAVCLHR 547
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 61/157 (38%), Gaps = 45/157 (28%)
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL------------------- 289
Q + + +V CG H ++V+ G+V+SWG E G L S+
Sbjct: 201 QILDVQNVSCGEKHAAIVTKQGEVFSWGKEDGGRLGHKVSVGVLHPKIIESLAFTHVKAI 260
Query: 290 ---TRNEAGDAISPILIS-GNGPHGPKFQDP---------------------VQVACGAA 324
++ AIS L G G H D V++ACG
Sbjct: 261 AFGAKHTCALAISGELFEWGEGTHSLGVWDDQCQRSQWYPHKLFGPLEGVSVVKMACGQW 320
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT +++ G +L+++G G GVLG G T P V
Sbjct: 321 HTAIISSSG-QLFTYGDGTFGVLGHGDTSSVARPKEV 356
>gi|332028555|gb|EGI68592.1| Putative E3 ubiquitin-protein ligase HERC4 [Acromyrmex echinatior]
Length = 1049
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 127/294 (43%), Gaps = 48/294 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ G +LA++ G L+ WG N L +S + + P + + +V++A
Sbjct: 89 IACGNCHTLAVNEWGQLFSWGCNMNGQLGLNSVD-----CTERVPRMIKVLGTNVIVQIA 143
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAV 192
CG+EH +AL + GE Y +WG+N GQLGLG + ++PK I T + +
Sbjct: 144 CGTEHSIALTNDGELY--------AWGSNREGQLGLGSYTTTEIKPKRISTL---AAVPI 192
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ CG +HT +++ +++G GQLG Q +P Q++ L +
Sbjct: 193 AFIACGGYHTIVISK--------SGAVFSWGRNTFGQLGLNDVQQRNLPCQLRTL-RNAK 243
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ CG + ++ G V++ G + G G N L R S +
Sbjct: 244 VCYATCGEEFSVFLTMDGGVFTCGAGMYGQLGHGNTTNEILPRQVMELMGSTV------- 296
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
Q++CG HT+ + ++++WG G +G LG + P +VL
Sbjct: 297 --------TQISCGKRHTLALVPSRGRVYAWGLGGAGQLGNRASQSATTPQVVL 342
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 111/244 (45%), Gaps = 38/244 (15%)
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
GG + F P V V ++ACG + VA+ G+ YS G N+ GQ
Sbjct: 15 GGIEDENIFMPREVDFIEASNVEQIACGENYTVAITKEGKV--------YSCGNNDYGQ- 65
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
LG ++R R ++I + + ++ CG+ HT + N+ + W G N
Sbjct: 66 -LGHEKARKRLQLIPGLD---AFVFRKIACGNCHTLAV------NEWGQLFSW--GCNMN 113
Query: 228 GQLGHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLC 284
GQLG + + VP +K L V +V + CG H+ +++ G++++WG E LGL
Sbjct: 114 GQLGLNSVDCTERVPRMIKVLGTNV-IVQIACGTEHSIALTNDGELYAWGSNREGQLGL- 171
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
S T E I P IS F +ACG HT++++ G ++SWGR
Sbjct: 172 --GSYTTTE----IKPKRISTLAAVPIAF-----IACGGYHTIVISKSG-AVFSWGRNTF 219
Query: 345 GVLG 348
G LG
Sbjct: 220 GQLG 223
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 31/198 (15%)
Query: 157 YSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ WG+ +G+LGLG + E+ P+ ++ + V ++ CG +T +T
Sbjct: 2 FCWGSTIHGELGLGGIEDENIFMPREVDFIEASN---VEQIACGENYTVAITK------- 51
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
E ++ G + GQLGH + L + + L +V+ + CG HT V+ G ++S
Sbjct: 52 -EGKVYSCGNNDYGQLGHEKARKRL--QLIPGLDAFVFR-KIACGNCHTLAVNEWGQLFS 107
Query: 275 WG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG M LGL R P +I G + VQ+ACG H++ +T+D
Sbjct: 108 WGCNMNGQLGLNSVDCTER-------VPRMIKVLGTNV-----IVQIACGTEHSIALTND 155
Query: 333 GYKLWSWGRGRSGVLGTG 350
G +L++WG R G LG G
Sbjct: 156 G-ELYAWGSNREGQLGLG 172
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 93/216 (43%), Gaps = 32/216 (14%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK-TNHKAPIKICSVKAGGMMSLAIDNA 90
DG+L GSN E L +G+ + E K + A + I + GG ++ I +
Sbjct: 155 DGELYAWGSNR------EGQLGLGSYTTTEIKPKRISTLAAVPIAFIACGGYHTIVISKS 208
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
GA++ WG ++ + G + V P + V CG E V L G
Sbjct: 209 GAVFSWGR----NTFGQLGLNDVQQRNLPCQLRTLRNAKVCYATCGEEFSVFLTMDGGV- 263
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT-ALLTHR 208
++ GA GQLG G+ + + P+ + + V +++CG HT AL+ R
Sbjct: 264 -------FTCGAGMYGQLGHGNTTNEILPRQVMELMGST---VTQISCGKRHTLALVPSR 313
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
R + +GLG GQLG+ +QSA P+ V
Sbjct: 314 GR--------VYAWGLGGAGQLGNRASQSATTPQVV 341
>gi|413951231|gb|AFW83880.1| putative regulator of chromosome condensation (RCC1) family protein
[Zea mays]
Length = 959
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 138/313 (44%), Gaps = 39/313 (12%)
Query: 59 SLEDDSKTNHKAPIKICSV---KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
S ED + IC+V G + A+ +G L+ WG+ + G + VS
Sbjct: 113 SREDSVHPRLVESLAICNVDIVACGEFHTCAVTTSGELYTWGD-GTHNIGLLGNGTDVSH 171
Query: 116 FTPSPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
+ P + GH V V+CG+ H + S G+ +++G G LG G+RES
Sbjct: 172 WIPKRISGVLEGHQVAYVSCGTWHTALVTSRGQ--------LFTFGDGTFGVLGHGNRES 223
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH---RKRPNDMLESMCWTFGLGENGQLG 231
P+ +E+ S V CG +HTA + + + M +T+G G+ +LG
Sbjct: 224 FSCPREVESL---SGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLG 280
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASL 289
HG + L P V L Y + + CG T ++++G V S G + LG
Sbjct: 281 HGDKEPKLKPTCVASLIDYDF-CRIACGHSLTVGLTTSGQVLSMGNTVYGQLG------- 332
Query: 290 TRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
N D P LI G H VQVACG+ H ++T+ ++++WG+G +G LG
Sbjct: 333 --NPRSDGKLPCLIEDIMGEH------VVQVACGSYHVAVLTNKS-EVFTWGKGANGRLG 383
Query: 349 TGKTIDFFAPAIV 361
G D P +V
Sbjct: 384 HGDVEDRKIPTLV 396
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D++G +++WG ++ G +++ S P P+ V V CG +H
Sbjct: 32 DSSGDVYVWGEVICDNTVRVGPDTVIRSTAKADFLLPKPLESKLVLDVYHVDCGVKHAAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ GE + +WG + G+LG G RE + P+++E+ + V V CG FH
Sbjct: 92 VTKNGEVF--------TWGEESGGRLGHGSREDSVHPRLVESL---AICNVDIVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LG+GT S +P+++ + + + V CG +
Sbjct: 141 TCAVTTSG------ELYTWGDGTHNIGLLGNGTDVSHWIPKRISGVLEGHQVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
HT++V+S G ++++ G LG S + +++S + + V
Sbjct: 195 HTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGL-------------KTIAV 241
Query: 320 ACGAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG HT V+VT KL++WG G LG G P V
Sbjct: 242 ACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPKLKPTCV 293
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 66/148 (44%), Gaps = 21/148 (14%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
C + G +++ + +G + GN L + ++G P + D G VV+
Sbjct: 302 CRIACGHSLTVGLTTSGQVLSMGNTVYGQLGNPRSDGKL-------PCLIEDIMGEHVVQ 354
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS HV L + E ++WG NG+LG GD E R P ++E+ A
Sbjct: 355 VACGSYHVAVLTNKSEV--------FTWGKGANGRLGHGDVEDRKIPTLVESLRDR---A 403
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CGS T+ + K + +S C
Sbjct: 404 VRHIACGSNFTSAICQHKWVSGAEQSQC 431
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG+ D G P+ V + ++ACG V L ++G+
Sbjct: 266 GKLFTWGD---GDKHRLGHGDKEPKLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQVL- 321
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
S G GQLG + +L P +IE + V +V CGS+H A+LT++
Sbjct: 322 -------SMGNTVYGQLGNPRSDGKL-PCLIEDIMGEH---VVQVACGSYHVAVLTNK-- 368
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NG+LGHG + +P V+ L + + CG TS +
Sbjct: 369 ------SEVFTWGKGANGRLGHGDVEDRKIPTLVESLRDRA-VRHIACGSNFTSAI 417
>gi|356554129|ref|XP_003545401.1| PREDICTED: uncharacterized protein LOC100802464 [Glycine max]
Length = 1106
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 136/312 (43%), Gaps = 41/312 (13%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P +E S TN I V G S A+ +G L+ WGN + G + VS +
Sbjct: 352 PKLIEALSNTN------IELVACGEYHSCAVTLSGDLYTWGNGTY-NYGLLGHGNQVSHW 404
Query: 117 TPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G V ++CG H + SAG+ +++G G LG GDR+S
Sbjct: 405 VPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQ--------LFTFGDGTFGALGHGDRKSV 456
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ +E+ CG +HTA ++ ++ +T+G G+ G+LG
Sbjct: 457 SLPREVESLKG---LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLG 513
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
H ++ LVP V V V+ CG T ++++G V++ G P
Sbjct: 514 HVDKEAKLVPTCVALAEHNVCQVA--CGHSLTVALTTSGRVYTMG-------SPVYGQLG 564
Query: 292 NEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
N D PIL+ G K + ++ACGA H ++T ++++WG+G +G LG
Sbjct: 565 NPQADGKLPILVEG------KLSESFVEEIACGAYHVAVLTSR-TEVYTWGKGANGRLGH 617
Query: 350 GKTIDFFAPAIV 361
G T D P +V
Sbjct: 618 GDTDDRNTPTLV 629
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 47/235 (20%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG H + GE + SWG + G+LG G L PK+IE + +
Sbjct: 311 VQNIACGGRHAALVTKQGEVF--------SWGEESGGRLGHGVDSDVLHPKLIEALSNTN 362
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENGQLGHGTTQSALVPEQVKE 246
+ V CG +H+ +T L +T+G G G LGHG S VP++V
Sbjct: 363 ---IELVACGEYHSCAVT--------LSGDLYTWGNGTYNYGLLGHGNQVSHWVPKRVNG 411
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ +++ + CG +HT+VV+SAG ++++ G LG S++ +++ +
Sbjct: 412 PLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRT- 470
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLG 348
V+ ACG HT V + L++WG G G LG
Sbjct: 471 ------------VRAACGVWHTAAVVEVMVGNSSSSNCSSVDLFTWGDGDKGRLG 513
Score = 61.6 bits (148), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 69/140 (49%), Gaps = 20/140 (14%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
H V +VACG VAL ++G Y + G+ GQLG + +L P ++E
Sbjct: 531 HNVCQVACGHSLTVALTTSGRVY--------TMGSPVYGQLGNPQADGKL-PILVEGKLS 581
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+S V E+ CG++H A+LT R + +T+G G NG+LGHG T P V+
Sbjct: 582 ES--FVEEIACGAYHVAVLTSR--------TEVYTWGKGANGRLGHGDTDDRNTPTLVEA 631
Query: 247 LPQYVYLVSVDCGLFHTSVV 266
L + S+ CG T+ +
Sbjct: 632 LKDK-DVKSIACGTTFTAAI 650
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 20/149 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+C V G +++A+ +G ++ G+ L + +G ++ S + V
Sbjct: 533 VCQVACGHSLTVALTTSGRVYTMGSPVYGQLGNPQADGKLPILVEGKLSESF------VE 586
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ACG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 587 EIACGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRNTPTLVEALKDKD-- 636
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + K + + +SMC
Sbjct: 637 -VKSIACGTTFTAAICLHKWVSGVDQSMC 664
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G +L P+ + E + + ++ CG H ++V+ G+V+SWG E G L
Sbjct: 292 GAKMDSLFPKAL-ESAVVLDVQNIACGGRHAALVTKQGEVFSWGEESG------GRLGHG 344
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTG 350
D + P LI + VACG H+ VT G L++WG G G+LG G
Sbjct: 345 VDSDVLHPKLIEALSNTNIEL-----VACGEYHSCAVTLSG-DLYTWGNGTYNYGLLGHG 398
Query: 351 KTIDFFAPAIVLWP 364
+ + P V P
Sbjct: 399 NQVSHWVPKRVNGP 412
>gi|157849730|gb|ABV89648.1| UVB-resistance 8 [Brassica rapa]
Length = 432
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 121/290 (41%), Gaps = 72/290 (24%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
FTP P+ HG + ++ACG H +A+ GE SWG N NGQLGLG+ E
Sbjct: 105 FTPLPIKALHGVMIKQIACGDSHCLAVTMDGEVQ--------SWGRNQNGQLGLGNTEDS 156
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML--ESMCWTFGLGE-NGQL-- 230
L P+ I+ F + V G+ HTA +T D+ + W FG+ + N +L
Sbjct: 157 LVPQKIQAFEGIR---IKMVAAGAEHTAAVTE---DGDLYGWDGKIWKFGISDRNDRLFL 210
Query: 231 ------GHGTTQSALVPEQVKELPQYVYL------------------------------- 253
+ + P L +YL
Sbjct: 211 KEYLCCVRDVDGAVMQPHISFLLWSIIYLWMEQIWPTRTWRLGGSPCFLTNWKRSATAFF 270
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ G HT ++S G ++ WG K +G+ N D SP+ + P
Sbjct: 271 SQISGGWRHTMPLTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV-----RFP 317
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D +P I+
Sbjct: 318 DDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESLDRNSPNII 366
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 101/223 (45%), Gaps = 37/223 (16%)
Query: 117 TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL 176
TP P V+ ++ G+ H VAL+S ++VC SWG +GQLG GD E R
Sbjct: 7 TPPP------RKVLIISAGASHSVALLSG-------EVVC-SWGRGEDGQLGHGDAEDRS 52
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
P + ++ + VTCG+ HT + + LE W G G+ G+LGHG +
Sbjct: 53 SPTQLSALDEHQ---IVSVTCGADHTVAYSQSR-----LEVYSW--GWGDFGRLGHGNSS 102
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
P +K L V + + CG H V+ G+V SWG + N L D
Sbjct: 103 DLFTPLPIKAL-HGVMIKQIACGDSHCLAVTMDGEVQSWGRNQ------NGQLGLGNTED 155
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
++ P I G + + VA GA HT VT+DG L+ W
Sbjct: 156 SLVPQKIQAF--EGIRIK---MVAAGAEHTAAVTEDG-DLYGW 192
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 93/205 (45%), Gaps = 22/205 (10%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + H +V
Sbjct: 10 PRKVLIISAGASHSVALLSGEVVCSWGRG---EDGQLGHGDAEDRSSPTQLSALDEHQIV 66
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA Y L YSWG + G+LG G+ P I+ +
Sbjct: 67 SVTCGADHTVA-------YSQSRLEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGV--- 116
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T ++ ++G +NGQLG G T+ +LVP++++ +
Sbjct: 117 MIKQIACGDSHCLAVT--------MDGEVQSWGRNQNGQLGLGNTEDSLVPQKIQAF-EG 167
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSW 275
+ + V G HT+ V+ GD++ W
Sbjct: 168 IRIKMVAAGAEHTAAVTEDGDLYGW 192
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 24/175 (13%)
Query: 189 PWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P V ++ G+ H+ ALL+ E +C ++G GE+GQLGHG + P Q+ L
Sbjct: 10 PRKVLIISAGASHSVALLSG--------EVVC-SWGRGEDGQLGHGDAEDRSSPTQLSAL 60
Query: 248 PQYVYLVSVDCGLFHTSVVSSAG-DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++ +VSV CG HT S + +V+SWG L + D +P+ I
Sbjct: 61 DEH-QIVSVTCGADHTVAYSQSRLEVYSWGWGD------FGRLGHGNSSDLFTPLPI--K 111
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HG + Q+ACG +H + VT DG ++ SWGR ++G LG G T D P +
Sbjct: 112 ALHGVMIK---QIACGDSHCLAVTMDG-EVQSWGRNQNGQLGLGNTEDSLVPQKI 162
Score = 47.0 bits (110), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+V P+ V ++S G H+ + S V SWG + + L +A D SP
Sbjct: 5 EVTPPPRKVLIIS--AGASHSVALLSGEVVCSWGRGE------DGQLGHGDAEDRSSPTQ 56
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+S H V V CGA HTV + +++SWG G G LG G + D F P
Sbjct: 57 LSALDEH-----QIVSVTCGADHTVAYSQSRLEVYSWGWGDFGRLGHGNSSDLFTP 107
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 52/117 (44%), Gaps = 19/117 (16%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++ G H + L S G+ Y WG N GQ+G+G+ + P + F D
Sbjct: 272 QISGGWRHTMPLTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQ-- 320
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V+CG HT +T R + +G G NGQLG G + P ++ L
Sbjct: 321 KVVQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESLDRNSPNIIEAL 369
Score = 42.0 bits (97), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%), Gaps = 8/59 (13%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV+V+CG H +A+ E ++WG NGQLG+G+ R P IIE + D
Sbjct: 322 VVQVSCGWRHTLAVT--------ERNNVFAWGRGTNGQLGIGESLDRNSPNIIEALSVD 372
>gi|351698259|gb|EHB01178.1| Putative E3 ubiquitin-protein ligase HERC1, partial [Heterocephalus
glaber]
Length = 3493
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 127/282 (45%), Gaps = 35/282 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 2719 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 2775
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK---IIETFNQDSPW-AVYEVTCGS 199
S G+ +++G + G+LGLG+ ++ P+ +E + W Y V CG
Sbjct: 2776 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEGYQIGQAWNKSYSVACGL 2827
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
HT ++ SM W FG G+ G+LG G + + P++V L + + V CG
Sbjct: 2828 NHTLAVSTDG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACG 2879
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
+ ++ G V+++G ++ +GL P RN P+L G +D V
Sbjct: 2880 TQFSVALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQVPVLA------GVVIED---V 2928
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
A GA HT+ + G +++WG G LG G T P +V
Sbjct: 2929 AVGAEHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 2969
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P V G
Sbjct: 2871 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQVPVLAGVV 2924
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 2925 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 2976
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 2977 ---IRQISAGRCHSAAWT 2991
>gi|224138854|ref|XP_002322918.1| predicted protein [Populus trichocarpa]
gi|222867548|gb|EEF04679.1| predicted protein [Populus trichocarpa]
Length = 467
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/286 (27%), Positives = 122/286 (42%), Gaps = 57/286 (19%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN--------------------CPLPDSSTEGGF- 110
++I SV AGG +LA+ + G +W WG P + T G
Sbjct: 208 VRITSVAAGGRHTLALSDTGQVWGWGYGGEGQLGLGSRVKMVSSPHLIPFTEQPTTGKHR 267
Query: 111 -SLV---SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
S+V S+ P+ V +F G V ++ACG H + AG L+ + WG GQ
Sbjct: 268 SSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTDAGT------LLTFGWGL--YGQ 319
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
G G +LRP + + S + + G +HT +T ++ + FG +
Sbjct: 320 CGHGSTNDQLRPTSLPSL---SGIQIERIAAGLWHTMCIT--------IDGRVYVFGGNQ 368
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVS-VDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
GQLG G +Q +P +++ LV V CG H++++ G V+SWG K L
Sbjct: 369 FGQLGTGASQGETLPRLLEDPCLESKLVKMVSCGARHSAILLEDGQVFSWGWNKYGQLGV 428
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
S+ RN +P + G P VACG HT+L+ +
Sbjct: 429 GDSIDRN------TPTQVPIEGCR------PKMVACGWWHTLLLAE 462
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 111/276 (40%), Gaps = 60/276 (21%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-- 172
+ TP+ V G + VA G H +AL G+ + WG GQLGLG R
Sbjct: 196 TVTPAIVSLGPGVRITSVAAGGRHTLALSDTGQVW--------GWGYGGEGQLGLGSRVK 247
Query: 173 ---------------ESRLRPKIIETFNQDSPWAV--------YEVTCGSFHTALLTHRK 209
+ R ++ + + P V E+ CG H+A++T
Sbjct: 248 MVSSPHLIPFTEQPTTGKHRSSVVHNGSTNLPAQVSNFPGSYVKEIACGGRHSAVVTD-- 305
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
TFG G GQ GHG+T L P + L + + + GL+HT ++
Sbjct: 306 ------AGTLLTFGWGLYGQCGHGSTNDQLRPTSLPSL-SGIQIERIAAGLWHTMCITID 358
Query: 270 GDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+ +G + G G +L R + L+ V+CGA H
Sbjct: 359 GRVYVFGGNQFGQLGTGASQGETLPRLLEDPCLESKLVK-------------MVSCGARH 405
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ +DG +++SWG + G LG G +ID P V
Sbjct: 406 SAILLEDG-QVFSWGWNKYGQLGVGDSIDRNTPTQV 440
>gi|24659266|gb|AAH38960.1| HERC3 protein [Homo sapiens]
Length = 368
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 106/241 (43%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLGH-EREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAISP 300
L Q L V CG +H +++ G ++WG GLG AS R + + I P
Sbjct: 134 LNQQTIL-QVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>gi|380792689|gb|AFE68220.1| RCC1 and BTB domain-containing protein 1, partial [Macaca mulatta]
Length = 345
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 65.9 bits (159), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/282 (26%), Positives = 122/282 (43%), Gaps = 43/282 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQTSSMAVL------DNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
+ + V++A C +AHT G ++ WG RG+S +L
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
>gi|222623461|gb|EEE57593.1| hypothetical protein OsJ_07959 [Oryza sativa Japonica Group]
Length = 976
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 44/314 (14%)
Query: 59 SLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL------ 112
S+ D A ++ ++ G + A+ +G L+ WG EG L
Sbjct: 242 SVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG---------EGTHCLGLWGDQ 292
Query: 113 --VSSFTPSPVW-DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S + P ++ G +++K+ACG H + SAG+ + ++G G LG
Sbjct: 293 YQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLF--------AYGDGTFGVLGH 344
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR--KRPNDMLESMCWTFGLGEN 227
GD + RPK +E+ A+ CG +HTA + R ++ +T+G +
Sbjct: 345 GDTLTVARPKQVESLKGVRAKAI---ACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADR 401
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
G+LGH + LVP V+ L + + V C T V++ G V++ G ++ L
Sbjct: 402 GKLGHADKKMKLVPTCVEPLNDFDF-AQVSCAKAQTIVLTITGVVFTIGSKEHGRL---- 456
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
N + S LI GP +F +++ G++H ++T +G K+++WG+G G L
Sbjct: 457 ---GNPLSEDTSICLI--EGPLKTEFVR--EISSGSSHIAVLTMNG-KVFTWGKGTEGQL 508
Query: 348 GTGKTIDFFAPAIV 361
G G +D P +V
Sbjct: 509 GLGDYVDRSYPTLV 522
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 46/282 (16%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
+++WG P + G S + P + H V VACG +H + GE +
Sbjct: 170 IFVWGEVP-GNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVF--- 225
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
SWG +N G+LG S PKIIE+ + V + G+ HT ++
Sbjct: 226 -----SWGVDNGGRLGHKVSVSVSDPKIIESL---ASTRVKAIAFGAKHTCAVS------ 271
Query: 213 DMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ + +G G + G G +S P ++ + ++ + CG +HT+++SSAG
Sbjct: 272 --ISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 329
Query: 271 DVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
++++ G LG ++ R + +++ + +ACG HT
Sbjct: 330 QLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-------------IACGPWHTAA 376
Query: 329 VTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + KL++WG G LG P V
Sbjct: 377 IVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCV 418
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 94/265 (35%), Gaps = 57/265 (21%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I I + G + I +AG L+ +G+ G ++ P V G
Sbjct: 310 ISILKIACGHWHTAIISSAGQLFAYGDGTF---GVLGHGDTLTVARPKQVESLKGVRAKA 366
Query: 132 VACGSEHVVALVSAGETYKGEDLV--CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ACG H A+V T K ++WG + G+LG D++ +L P +E N
Sbjct: 367 IACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLND--- 423
Query: 190 WAVYEVTCGSFHTALLT------------HRKRPNDMLE--SMC---------------- 219
+ +V+C T +LT H + N + E S+C
Sbjct: 424 FDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISS 483
Query: 220 --------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+T+G G GQLG G P V+ L + S+ CG T
Sbjct: 484 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDK-QVHSIACGFNFTMA 542
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLT 290
+ + S K +C N LT
Sbjct: 543 ICLHRPLSS----KDQSVCSNCQLT 563
>gi|402902028|ref|XP_003913931.1| PREDICTED: RCC1 and BTB domain-containing protein 1 isoform 2
[Papio anubis]
Length = 355
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 121/282 (42%), Gaps = 43/282 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
+ + V++A C +AHT G ++ WG RG+S +L
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVIL 320
>gi|449270679|gb|EMC81336.1| putative E3 ubiquitin-protein ligase HERC3 [Columba livia]
Length = 1050
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L + P + + T+
Sbjct: 86 IVHVACGESHSLALSDQGQLFSWG------AGSDGQLGLTTIEDAVTVPRLIKKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G +GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGKNSSGQLGLSDERDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RSQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 118/260 (45%), Gaps = 48/260 (18%)
Query: 111 SLVSSFTPSP-VWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
S + P P V+ F H V +VACG H V L+ GE Y + G N GQLG
Sbjct: 16 SNIQVIVPEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG 67
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
D E +I Q + V CG H+ L+ + + +++G G +G
Sbjct: 68 -HDCEGSKPEQIGALAGQH----IVHVACGESHSLALSDQGQ--------LFSWGAGSDG 114
Query: 229 QLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGL 283
QLG T + A+ VP +K+L Q ++ V CG +H +++ G ++WG + GLG
Sbjct: 115 QLGLTTIEDAVTVPRLIKKLNQQT-ILQVSCGNWHCLALAADGQFFTWGQNSYGQLGLGK 173
Query: 284 -CPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
CP+ AS R ++ D I P+ QVA G AH+ ++ G ++ WG+
Sbjct: 174 ECPSQASPQRVKSLDGI-PL---------------AQVAAGGAHSFALSLSG-AVFGWGK 216
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
SG LG D +P V
Sbjct: 217 NSSGQLGLSDERDRESPCHV 236
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG +SS + G S +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWGK----NSSGQLGLSDERDRESPCHVKLLRSQKVV 245
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSP 189
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 246 YISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE-- 295
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ M + FG G GQLG G T + P VK
Sbjct: 296 --VSQIACGRHHTLAFV----PSS---GMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>gi|330802866|ref|XP_003289433.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
gi|325080475|gb|EGC34029.1| hypothetical protein DICPUDRAFT_153832 [Dictyostelium purpureum]
Length = 1719
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 109/241 (45%), Gaps = 37/241 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
++K++C + A+ G Y+WG +NG+LG GD + PK + + +
Sbjct: 305 IIKLSCSTNRSAAISKLG--------YLYTWGRGDNGRLGHGDSLMQSTPKQVMSLH--- 353
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKEL 247
+ +++ G H+ LT R +++G GENGQLGHGT T + P+Q++
Sbjct: 354 GHTIVDMSLGGGHSMALTKRGE--------VFSWGRGENGQLGHGTFTSQQMTPKQIQAF 405
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
V + G +H+ + + G +++WG L ++SL + GD SP+LI
Sbjct: 406 QNKTIKV-ISAGGYHSIAIDTNGSMFAWGRGDYGVLGVSSSL--DSLGDINSPVLIKSLN 462
Query: 308 PH----------GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
G +F + V+ G H V T++G L+SWG G LG +
Sbjct: 463 NSNGSNNSNSSAGERF---INVSSGFQHNVAQTENG-DLYSWGCGSGNRLGLANEENQLI 518
Query: 358 P 358
P
Sbjct: 519 P 519
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/340 (25%), Positives = 148/340 (43%), Gaps = 60/340 (17%)
Query: 49 EQFLTIGAPDSLE-DDSKTNHKAPI---KICSVKAGGMMSLAIDNAGALWMWGNCPLPDS 104
+QF+ I LE DD++ + K+ + G + + I + G L+ WG+ L
Sbjct: 134 DQFIDISTIPKLELDDNEQYERIDFLKEKVVFISTGAIHTSIITDKGHLYTWGDGLL--- 190
Query: 105 STEGGFSLVSSFTPSPVWDFHGH---TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
G +L S P V F VV VA G +H VAL G YS+G
Sbjct: 191 GKLGHGTLESYSEPRLVEFFETKPSLRVVSVANGGKHTVALTVCGN--------VYSFGG 242
Query: 162 NNNGQLGLGDRESRL--RPKIIETFNQDSPWAVYE-----VTCGSFHTALLTHRKRPNDM 214
N++ QLGLG+ S P+++ TF + + S T +++ ++
Sbjct: 243 NDSCQLGLGNISSSYYSTPQLV-TFQSPQSLSNSNSSSPIIMSNSTSTLFNKQQQQSSNK 301
Query: 215 LESMC------------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
++ + +T+G G+NG+LGHG + P+QV L + +V +
Sbjct: 302 IDRIIKLSCSTNRSAAISKLGYLYTWGRGDNGRLGHGDSLMQSTPKQVMSLHGHT-IVDM 360
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
G H+ ++ G+V+SWG + G + + T + ++P I FQ+
Sbjct: 361 SLGGGHSMALTKRGEVFSWGRGEN-GQLGHGTFTSQQ----MTPKQIQA-------FQNK 408
Query: 317 V--QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
++ G H++ + +G +++WGRG GVLG ++D
Sbjct: 409 TIKVISAGGYHSIAIDTNG-SMFAWGRGDYGVLGVSSSLD 447
Score = 72.0 bits (175), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 78/276 (28%), Positives = 114/276 (41%), Gaps = 54/276 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVK 131
+I + S AI G L+ WG D+ G G SL+ S TP V HGHT+V
Sbjct: 304 RIIKLSCSTNRSAAISKLGYLYTWGRG---DNGRLGHGDSLMQS-TPKQVMSLHGHTIVD 359
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQDSPW 190
++ G H +AL GE +SWG NGQLG G S ++ PK I+ F +
Sbjct: 360 MSLGGGHSMALTKRGE--------VFSWGRGENGQLGHGTFTSQQMTPKQIQAFQNKT-- 409
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL----VPEQVKE 246
+ ++ G +H+ + D SM + +G G+ G LG ++ +L P +K
Sbjct: 410 -IKVISAGGYHSIAI-------DTNGSM-FAWGRGDYGVLGVSSSLDSLGDINSPVLIKS 460
Query: 247 LPQYVY-----------LVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNE 293
L ++V G H + GD++SWG G LGL NE
Sbjct: 461 LNNSNGSNNSNSSAGERFINVSSGFQHNVAQTENGDLYSWGCGSGNRLGLA-------NE 513
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
I L + P F +CG T++V
Sbjct: 514 ENQLIPKKLNDRSNNSKPAF-----FSCGEIITIIV 544
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 86/194 (44%), Gaps = 35/194 (18%)
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK--ELPQYVY 252
++ G+ HT+++T + +T+G G G+LGHGT +S P V+ E +
Sbjct: 166 ISTGAIHTSIITDK--------GHLYTWGDGLLGKLGHGTLESYSEPRLVEFFETKPSLR 217
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNE--------------- 293
+VSV G HT ++ G+V+S+G + GLG ++ + +
Sbjct: 218 VVSVANGGKHTVALTVCGNVYSFGGNDSCQLGLGNISSSYYSTPQLVTFQSPQSLSNSNS 277
Query: 294 -----AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
++ S + K ++++C + ++ GY L++WGRG +G LG
Sbjct: 278 SSPIIMSNSTSTLFNKQQQQSSNKIDRIIKLSCSTNRSAAISKLGY-LYTWGRGDNGRLG 336
Query: 349 TGKTIDFFAPAIVL 362
G ++ P V+
Sbjct: 337 HGDSLMQSTPKQVM 350
>gi|237835825|ref|XP_002367210.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|211964874|gb|EEB00070.1| regulator of chromosome condensation domain-containing protein
[Toxoplasma gondii ME49]
gi|221506115|gb|EEE31750.1| regulator of chromosome condensation domain-containing protein,
putative [Toxoplasma gondii VEG]
Length = 1205
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 123/275 (44%), Gaps = 56/275 (20%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIE 182
F +V +VA G H + + KG+ + WG N + LG+G + R+ P ++
Sbjct: 43 FGPASVKRVALGLYHTLVV-----GLKGDQPQLFGWGKNYSNVLGMGVEIRERVFPGLVP 97
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHR-KRPNDMLESMCWTFGLGENGQLGHGTTQSALV- 240
F S +EV+CG+ ++A+L R ++P + +TFGLG G+LG+ ++ V
Sbjct: 98 FF---SKMGTFEVSCGTNNSAVLVKRAQQPGGKV----YTFGLGNRGRLGYPKNKADGVA 150
Query: 241 --------------PEQVKELPQYVY------LVSVDCGLFHTSVVSSAGDVWSWGMEKG 280
P P V + + CG HT +S G +++WG+
Sbjct: 151 GYQGDFSGDGQEDGPSWFTPKPSRVRFRDKCKIARISCGADHTLALSDEGALYAWGVGS- 209
Query: 281 LGLCPNASLTRNEAGDAISPILI-----SGNGPH------GPKFQDPVQVAC---GAAHT 326
+L + + D+ +P+ + +G+G G DPV V C GA H+
Sbjct: 210 -----YGNLGQGDTSDSYTPVRVYLGSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHS 264
Query: 327 VLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ T DG LW+WG G +G LG G +PA+V
Sbjct: 265 MACTSDG-TLWTWGHGGNGRLGLGHNRGSLSPAVV 298
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 85/323 (26%), Positives = 139/323 (43%), Gaps = 76/323 (23%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPV-WDFHGHTVVK 131
S++ G ++A+ AGA+W+WG S+ +G L V PV + + +
Sbjct: 504 SLECGESHTIALTGAGAVWVWG------SNDDGQLGLGEDVEEDQYEPVKLECFSTPIRR 557
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS+H +A+ G+ + +WGAN+NGQLGLG P + Q
Sbjct: 558 IACGSKHCLAVAQYGDVF--------AWGANDNGQLGLGVVRPSFEPAAVTALRQ----- 604
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESM------CWTFGLGENGQLGHG---TTQSALVPE 242
+V CG ++A +T + W +G E+G+LG G + S L P+
Sbjct: 605 AVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVASGSILTPQ 664
Query: 243 QVK-------------ELPQY--VYLVSVD---CGLFHTSVVSSAGDVWSWGM----EKG 280
+V E+ Y V+ VS G H+ +++ G+ ++WG G
Sbjct: 665 KVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQGECYAWGAGYYGRLG 724
Query: 281 LGLCPNA-SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
+G NA + TR + P G + + VA GA H++ ++ DG LW W
Sbjct: 725 IGTTANAYTPTRCDF-------------PKGVRLRS---VAAGACHSLALSMDG-DLWFW 767
Query: 340 GRGRSGVLGTGKTIDFFAPAIVL 362
GR T T ++ +P I +
Sbjct: 768 GRRED----TCSTTNYMSPRIFM 786
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 90/333 (27%), Positives = 132/333 (39%), Gaps = 84/333 (25%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF------TPSPVWDFHGH 127
I V AG S ID G L+ WG+ GGF + P V F G
Sbjct: 306 IVFVNAGDSHSACIDRQGVLYTWGS---------GGFGRLGHGDQGEIPVPRKVEGFGGV 356
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQ 186
V++VACG+ H +AL T+KG ++WGA LG G+ E + +
Sbjct: 357 PVLQVACGTFHTLAL-----THKG---TVFAWGAGL--ALGFGEGEDGSGGMVAVPKHLS 406
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D AV + G +H+A +T D+L +G+G + +LGHG Q+ P+ V +
Sbjct: 407 DIEAAVLNIAAGPYHSAAVT---VGGDLL-----VWGVGGSSRLGHGDQQNQPFPKYVAD 458
Query: 247 LPQYVY-------------------------------------LVSVDCGLFHTSVVSSA 269
L +Y L S++CG HT ++ A
Sbjct: 459 LRNRMYVSDLQSMLGVSRLKREYSDLDVLDVPGTSGTNQSSWTLQSLECGESHTIALTGA 518
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVL 328
G VW WG L L + D P+ + F P+ ++ACG+ H +
Sbjct: 519 GAVWVWGSNDDGQL----GLGEDVEEDQYEPVKLE-------CFSTPIRRIACGSKHCLA 567
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V G +++WG +G LG G F PA V
Sbjct: 568 VAQYG-DVFAWGANDNGQLGLGVVRPSFEPAAV 599
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 83/304 (27%), Positives = 123/304 (40%), Gaps = 48/304 (15%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW- 122
S+ + KI + G +LA+ + GAL+ WG + G S+TP V+
Sbjct: 173 SRVRFRDKCKIARISCGADHTLALSDEGALYAWG---VGSYGNLGQGDTSDSYTPVRVYL 229
Query: 123 ---DFHGHTVVKVACGSEH----VVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDR 172
G V G +V SAG + D ++WG NG+LGLG
Sbjct: 230 GSEAGSGKKKENVGVGKVRADPVIVTCCSAGAKHSMACTSDGTLWTWGHGGNGRLGLGHN 289
Query: 173 ESRLRPKIIE-TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
L P +++ ++D + V G H+A + + + +T+G G G+LG
Sbjct: 290 RGSLSPAVVDYILDRD----IVFVNAGDSHSACIDR--------QGVLYTWGSGGFGRLG 337
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG VP +V+ V ++ V CG FHT ++ G V++WG LG
Sbjct: 338 HGDQGEIPVPRKVEGFGG-VPVLQVACGTFHTLALTHKGTVFAWGAGLALGF-------- 388
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQ-----VACGAAHTVLVTDDGYKLWSWGRGRSGV 346
E D SG PK ++ +A G H+ VT G L WG G S
Sbjct: 389 GEGEDG------SGGMVAVPKHLSDIEAAVLNIAAGPYHSAAVTVGG-DLLVWGVGGSSR 441
Query: 347 LGTG 350
LG G
Sbjct: 442 LGHG 445
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 116/269 (43%), Gaps = 61/269 (22%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD--RESRLRPKIIETFN 185
T+ + CG H +AL AG + WG+N++GQLGLG+ E + P +E F+
Sbjct: 501 TLQSLECGESHTIALTGAG--------AVWVWGSNDDGQLGLGEDVEEDQYEPVKLECFS 552
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ + CGS H + + +G +NGQLG G + + P V
Sbjct: 553 T----PIRRIACGSKHCLAVAQYGD--------VFAWGANDNGQLGLGVVRPSFEPAAVT 600
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSA--------------GDVWSWG-MEKG-LGLCPNASL 289
L Q V V CG +++ ++S GD+W+WG E G LGL + +
Sbjct: 601 ALRQ---AVDVFCGDDYSACITSLGGAQSVSGETGTEFGDLWAWGAAESGKLGLGEDVA- 656
Query: 290 TRNEAGDAISPILISGNGP------HGPKFQDPVQVAC--------GAAHTVLVTDDGYK 335
+G ++P + + P + Q +V C G +H++ +T G +
Sbjct: 657 ----SGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLAITAQG-E 711
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
++WG G G LG G T + + P +P
Sbjct: 712 CYAWGAGYYGRLGIGTTANAYTPTRCDFP 740
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 57/145 (39%), Gaps = 21/145 (14%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L IG + ++ + +++ SV AG SLA+ G LW WG E S
Sbjct: 723 LGIGTTANAYTPTRCDFPKGVRLRSVAAGACHSLALSMDGDLWFWGR-------REDTCS 775
Query: 112 LVSSFTPSPVWDFHGH----TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
+ +P G V ++ H +A+ AGE ++WG N Q
Sbjct: 776 TTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEV--------FAWGDNKLYQT 827
Query: 168 GLGDRES-RL-RPKIIETFNQDSPW 190
G G R++ RL RP+ + W
Sbjct: 828 GCGKRQAERLDRPERVAGLPSACQW 852
Score = 38.1 bits (87), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 68/299 (22%), Positives = 111/299 (37%), Gaps = 88/299 (29%)
Query: 60 LEDDSKTNHKAPIK-------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L +D + + P+K I + G LA+ G ++ WG + + + G +
Sbjct: 534 LGEDVEEDQYEPVKLECFSTPIRRIACGSKHCLAVAQYGDVFAWG----ANDNGQLGLGV 589
Query: 113 VS-SFTPSPVWDFHGHTVVKVACGSEHVVALVSAG--ETYKGE------DLVCYSWGANN 163
V SF P+ V V V CG ++ + S G ++ GE DL ++WGA
Sbjct: 590 VRPSFEPAAVTALR--QAVDVFCGDDYSACITSLGGAQSVSGETGTEFGDL--WAWGAAE 645
Query: 164 NGQLGLGD---RESRLRPKIIE--------TFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
+G+LGLG+ S L P+ + + + A V C SF
Sbjct: 646 SGKLGLGEDVASGSILTPQKVVFSVPVCACSLDSLEMQAYKRVFCVSFSPLCSGTSHSLA 705
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL------------VSVDCGL 260
+ C+ +G G G+LG GTT +A P + + P+ V L +S+D L
Sbjct: 706 ITAQGECYAWGAGYYGRLGIGTTANAYTPTRC-DFPKGVRLRSVAAGACHSLALSMDGDL 764
Query: 261 F----------------------------------------HTSVVSSAGDVWSWGMEK 279
+ H+ V+ AG+V++WG K
Sbjct: 765 WFWGRREDTCSTTNYMSPRIFMQLEGQGGVPKVKSISASERHSLAVTEAGEVFAWGDNK 823
>gi|298710216|emb|CBJ26291.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1089
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/256 (29%), Positives = 116/256 (45%), Gaps = 32/256 (12%)
Query: 114 SSFTPSPVWDFHGHT--VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
SSF P V T + +V CG EH AL S G+ +G GQLG+G+
Sbjct: 29 SSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVL--------GFGNGVKGQLGIGN 80
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+S P+ + S V ++ G H+ LT D+ + FG +GQLG
Sbjct: 81 TDSHSNPQRVHLL---SGKGVVKMAAGLEHSLALTES---GDL-----YAFGDNLSGQLG 129
Query: 232 --HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
H T P++V L + + + CG HT+V++S+G+++ +G + L
Sbjct: 130 LGHNFTAKEQTPQKVPPLGR-AKITQLACGQDHTAVLTSSGELFMFGNNRDGALGVAGHA 188
Query: 290 TRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
A +P L++G G H VQ+ CG HTV +T G ++ WG G LG
Sbjct: 189 NEGPPIVASAPQLVTGLKGKH------VVQIGCGLQHTVALTAAG-GVYCWGENGRGQLG 241
Query: 349 TGKTIDFFAPAIVLWP 364
TG T + + P++V P
Sbjct: 242 TGDTQNRYTPSLVCKP 257
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR- 172
S P V G VVK+A G EH +AL +G+ Y ++G N +GQLGLG
Sbjct: 83 SHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLY--------AFGDNLSGQLGLGHNF 134
Query: 173 -ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ + + + ++ CG HTA+LT + FG +G LG
Sbjct: 135 TAKEQTPQKVPPLGR---AKITQLACGQDHTAVLTS--------SGELFMFGNNRDGALG 183
Query: 232 HGTTQSALVPEQVKELPQYV------YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+ P V PQ V ++V + CGL HT +++AG V+ WG E G G
Sbjct: 184 V-AGHANEGPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAGGVYCWG-ENGRG--- 238
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDP------VQVACGAAHTVLVTDDGYKLWSW 339
L + + +P L+ P + VACG HT+ VT D ++ +
Sbjct: 239 --QLGTGDTQNRYTPSLVC----------KPLSAFKCIHVACGGQHTIAVT-DCDDVYGF 285
Query: 340 GRGRSGVLGTGK 351
G R G LG G+
Sbjct: 286 GSDRHGQLGLGR 297
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 100/239 (41%), Gaps = 36/239 (15%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L IG DS + + + + + + AG SLA+ +G L+ +G+ + G
Sbjct: 76 LGIGNTDSHSNPQRVHLLSGKGVVKMAAGLEHSLALTESGDLYAFGD------NLSGQLG 129
Query: 112 LVSSFT-----PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
L +FT P V + ++ACG +H L S+GE + +G N +G
Sbjct: 130 LGHNFTAKEQTPQKVPPLGRAKITQLACGQDHTAVLTSSGELFM--------FGNNRDGA 181
Query: 167 LGLGDRESRLRPKIIETFNQD----SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTF 222
LG+ + P I+ + Q V ++ CG HT LT CW
Sbjct: 182 LGVAGHANE-GPPIVASAPQLVTGLKGKHVVQIGCGLQHTVALTAAG------GVYCW-- 232
Query: 223 GLGENG--QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
GENG QLG G TQ+ P V + + V CG HT V+ DV+ +G ++
Sbjct: 233 --GENGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVYGFGSDR 289
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 73/155 (47%), Gaps = 18/155 (11%)
Query: 216 ESMCWTFGLGENGQLGHGT-TQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
S+ W G GQLG+GT TQS+ +P +V +L + V CG HT ++S GDV
Sbjct: 7 RSLVWAVGGNSKGQLGNGTPTQSSFLPCRVAFQLAPTQRIAEVFCGYEHTFALTSDGDVL 66
Query: 274 SW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+ G++ LG+ S + + L+SG G V++A G H++ +T+
Sbjct: 67 GFGNGVKGQLGIGNTDSHSNPQ-----RVHLLSGKG--------VVKMAAGLEHSLALTE 113
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
G L+++G SG LG G PPL
Sbjct: 114 SG-DLYAFGDNLSGQLGLGHNFTAKEQTPQKVPPL 147
Score = 39.7 bits (91), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 59/142 (41%), Gaps = 23/142 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DG LG +G + P ++ AP L K H + + G ++A+ AG
Sbjct: 179 DGALGVAGHANEGPPIVAS-----AP-QLVTGLKGKH-----VVQIGCGLQHTVALTAAG 227
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVVALVSAGETYK 150
++ WG G + +TPS V + VACG +H +A+ + Y
Sbjct: 228 GVYCWGE---NGRGQLGTGDTQNRYTPSLVCKPLSAFKCIHVACGGQHTIAVTDCDDVY- 283
Query: 151 GEDLVCYSWGANNNGQLGLGDR 172
+G++ +GQLGLG R
Sbjct: 284 -------GFGSDRHGQLGLGRR 298
>gi|431911479|gb|ELK13685.1| Putative E3 ubiquitin-protein ligase HERC6 [Pteropus alecto]
Length = 1010
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 105/243 (43%), Gaps = 37/243 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ G ++ WG +++G L F +P V G
Sbjct: 126 IKIIQVSCGHYHSLALSEDGQVYSWG------KNSQGQLGLGKEFPSQASPQRVRSLEGI 179
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES---RLRPKIIETF 184
+ +VA G H AL +G + + WG+NN GQL L + R +P I
Sbjct: 180 PLAQVAAGGAHSFALSLSGTS--------FGWGSNNTGQLALSGNNTPVQRYKPHSIGAL 231
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V ++CG HTA+LT + +TFG GQLG+ T P+QV
Sbjct: 232 KS---LDVIYISCGYEHTAVLTQNGK--------VFTFGDNSCGQLGYNPTAKKRGPQQV 280
Query: 245 KELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
+ + V +DCG +HT + V + G+V S+G + P S + E D LI
Sbjct: 281 EGIDGLV--SQIDCGSYHTLAYVYTTGEVVSFGRGRNCASSPTHSEAQMENFDM--SCLI 336
Query: 304 SGN 306
S N
Sbjct: 337 SAN 339
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 121/278 (43%), Gaps = 50/278 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + FTP + G +++V
Sbjct: 78 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIEECKEKIFTPKKIKTLTGIKIIQV 131
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL ED YSWG N+ GQLGLG S+ P+ + + + P A
Sbjct: 132 SCGHYHSLAL--------SEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSL-EGIPLA 182
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL---GHGTTQSALVPEQVKELP 248
+V G H+ L+ L + +G GQL G+ T P + L
Sbjct: 183 --QVAAGGAHSFALS--------LSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGAL- 231
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
+ + ++ + CG HT+V++ G V+++G LG P A + + I ++
Sbjct: 232 KSLDVIYISCGYEHTAVLTQNGKVFTFGDNSCGQLGYNPTAKKRGPQQVEGIDGLV---- 287
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
Q+ CG+ HT+ ++ S+GRGR+
Sbjct: 288 ----------SQIDCGSYHTLAYVYTTGEVVSFGRGRN 315
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/282 (25%), Positives = 111/282 (39%), Gaps = 67/282 (23%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V + ACG H + L+S G +S G N GQLG + RP +I+
Sbjct: 20 GAEVRQAACGERHSLLLLSDG--------TVHSCGDNTQGQLGRRGKPREERPGLIKAL- 70
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPEQV 244
V V+CG H+ + H+ R + +G G GQLG + P+++
Sbjct: 71 --ETLLVGLVSCGKEHSLAVCHKGR--------VFAWGAGSEGQLGIEECKEKIFTPKKI 120
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAI 298
K L + ++ V CG +H+ +S G V+SWG + GLG AS R + + I
Sbjct: 121 KTLTG-IKIIQVSCGHYHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQRVRSLEGI 179
Query: 299 SPILISGNGPH-------GPKF---------------QDPVQ-----------------V 319
++ G H G F PVQ +
Sbjct: 180 PLAQVAAGGAHSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYI 239
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+CG HT ++T +G K++++G G LG T P V
Sbjct: 240 SCGYEHTAVLTQNG-KVFTFGDNSCGQLGYNPTAKKRGPQQV 280
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 76/180 (42%), Gaps = 19/180 (10%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVI-EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGM 82
Y SL DGQ+ G NS + ++F + +P + I + V AGG
Sbjct: 136 YHSLALSEDGQVYSWGKNSQGQLGLGKEFPSQASPQ------RVRSLEGIPLAQVAAGGA 189
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
S A+ +G + WG+ + G + V + P + V+ ++CG EH L
Sbjct: 190 HSFALSLSGTSFGWGSNNTGQLALSGNNTPVQRYKPHSIGALKSLDVIYISCGYEHTAVL 249
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ +++G N+ GQLG + P+ +E + V ++ CGS+HT
Sbjct: 250 TQNGKV--------FTFGDNSCGQLGYNPTAKKRGPQQVEGIDG----LVSQIDCGSYHT 297
>gi|41052709|dbj|BAD07566.1| putative ZR1 protein [Oryza sativa Japonica Group]
gi|50251941|dbj|BAD27877.1| putative ZR1 protein [Oryza sativa Japonica Group]
Length = 978
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 81/314 (25%), Positives = 140/314 (44%), Gaps = 44/314 (14%)
Query: 59 SLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL------ 112
S+ D A ++ ++ G + A+ +G L+ WG EG L
Sbjct: 244 SVSDPKIIESLASTRVKAIAFGAKHTCAVSISGELYEWG---------EGTHCLGLWGDQ 294
Query: 113 --VSSFTPSPVW-DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
S + P ++ G +++K+ACG H + SAG+ + ++G G LG
Sbjct: 295 YQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAGQLF--------AYGDGTFGVLGH 346
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR--KRPNDMLESMCWTFGLGEN 227
GD + RPK +E+ A+ CG +HTA + R ++ +T+G +
Sbjct: 347 GDTLTVARPKQVESLKGVRAKAI---ACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADR 403
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
G+LGH + LVP V+ L + + V C T V++ G V++ G ++ L
Sbjct: 404 GKLGHADKKMKLVPTCVEPLNDFDF-AQVSCAKAQTIVLTITGVVFTIGSKEHGRL---- 458
Query: 288 SLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
N + S LI GP +F +++ G++H ++T +G K+++WG+G G L
Sbjct: 459 ---GNPLSEDTSICLI--EGPLKTEFVR--EISSGSSHIAVLTMNG-KVFTWGKGTEGQL 510
Query: 348 GTGKTIDFFAPAIV 361
G G +D P +V
Sbjct: 511 GLGDYVDRSYPTLV 524
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/282 (22%), Positives = 112/282 (39%), Gaps = 46/282 (16%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
+++WG P + G S + P + H V VACG +H + GE +
Sbjct: 172 IFVWGEVP-GNVLDHGDVSKANVSLPRLLNTTHIIDVQSVACGEKHAAIVTKQGEVF--- 227
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
SWG +N G+LG S PKIIE+ + V + G+ HT ++
Sbjct: 228 -----SWGVDNGGRLGHKVSVSVSDPKIIESL---ASTRVKAIAFGAKHTCAVS------ 273
Query: 213 DMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ + +G G + G G +S P ++ + ++ + CG +HT+++SSAG
Sbjct: 274 --ISGELYEWGEGTHCLGLWGDQYQRSQWFPHKLFGPLDGISILKIACGHWHTAIISSAG 331
Query: 271 DVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
++++ G LG ++ R + +++ + +ACG HT
Sbjct: 332 QLFAYGDGTFGVLGHGDTLTVARPKQVESLKGVRAKA-------------IACGPWHTAA 378
Query: 329 VTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + KL++WG G LG P V
Sbjct: 379 IVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCV 420
Score = 43.5 bits (101), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 61/265 (23%), Positives = 94/265 (35%), Gaps = 57/265 (21%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I I + G + I +AG L+ +G+ G ++ P V G
Sbjct: 312 ISILKIACGHWHTAIISSAGQLFAYGDGTF---GVLGHGDTLTVARPKQVESLKGVRAKA 368
Query: 132 VACGSEHVVALVSAGETYKGEDLV--CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ACG H A+V T K ++WG + G+LG D++ +L P +E N
Sbjct: 369 IACGPWHTAAIVERMGTVKSNAPSGKLFTWGDADRGKLGHADKKMKLVPTCVEPLND--- 425
Query: 190 WAVYEVTCGSFHTALLT------------HRKRPNDMLE--SMC---------------- 219
+ +V+C T +LT H + N + E S+C
Sbjct: 426 FDFAQVSCAKAQTIVLTITGVVFTIGSKEHGRLGNPLSEDTSICLIEGPLKTEFVREISS 485
Query: 220 --------------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+T+G G GQLG G P V+ L + S+ CG T
Sbjct: 486 GSSHIAVLTMNGKVFTWGKGTEGQLGLGDYVDRSYPTLVEALEDK-QVHSIACGFNFTMA 544
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLT 290
+ + S K +C N LT
Sbjct: 545 ICLHRPLSS----KDQSVCSNCQLT 565
>gi|301791658|ref|XP_002930797.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Ailuropoda melanoleuca]
Length = 348
Score = 82.8 bits (203), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTTNQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 78/282 (27%), Positives = 121/282 (42%), Gaps = 43/282 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTTNQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
+ + V++ AC +AHT G ++ WG RG+S VL
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVL 320
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 68/140 (48%), Gaps = 13/140 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAP 358
WG G +G+G T + P
Sbjct: 152 WGYNNCGQVGSGSTTNQPTP 171
>gi|422295033|gb|EKU22332.1| phosphatidylinositide phosphatase sac1 [Nannochloropsis gaditana
CCMP526]
Length = 1021
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 101/222 (45%), Gaps = 30/222 (13%)
Query: 156 CYSWGANNNGQLG---------------LGDRESRL-RPKIIETFNQDSPWAVYEVTCGS 199
++WG GQLG L RE RL + + + +PW ++ G
Sbjct: 637 VFAWGQGTEGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLAAGL 696
Query: 200 FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
++A +T + +T+G G N +LGHG ++ P QV+ L Q V +V V CG
Sbjct: 697 NYSAGVTE--------DGKLYTWGDGSNHKLGHGDSKPVYRPRQVEAL-QDVKIVKVACG 747
Query: 260 LFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
FHT+ + G +W+WG L +EA + P ++ +G + V
Sbjct: 748 DFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEA-EQPRPKVVRSLVDYGCRVGS---V 803
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG HT+++TDDG ++ + G G G LG G + D P V
Sbjct: 804 ACGEKHTLILTDDG-EVLTAGNGEYGRLGNGGSSDHGVPEPV 844
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 144/362 (39%), Gaps = 63/362 (17%)
Query: 32 DGQLGFS--GSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG S ++L +E D+ +D K P + AG S +
Sbjct: 645 EGQLGHSPIQKSALTGAYVELSPRELRLDTEQDQQKIEKHNPWGFVDLAAGLNYSAGVTE 704
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
G L+ WG+ + G + P V +VKVACG H A+
Sbjct: 705 DGKLYTWGDG---SNHKLGHGDSKPVYRPRQVEALQDVKIVKVACGDFHTAAI------- 754
Query: 150 KGEDLVCYSWG-----ANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
ED ++WG G LG GD + RPK++ + D V V CG HT +
Sbjct: 755 -DEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSL-VDYGCRVGSVACGEKHTLI 812
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
LT + T G GE G+LG+G + VPE V+ + +V V G
Sbjct: 813 LTD--------DGEVLTAGNGEYGRLGNGGSSDHGVPEPVELFDEKTNIVEVAAGHAFNL 864
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRN-----------EAGDAISPILISGNGPH---- 309
V++ G +++WG + L ++ + EA ++ + ++ H
Sbjct: 865 VLTQDGKIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAV 924
Query: 310 ---------GPKFQ-----------DPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
G K D V QV CG +HT +VT+D ++L+++G+G S LG
Sbjct: 925 TEEGELYMWGMKIHLEPQVFRVGEGDKVWQVGCGGSHTAVVTEDAHQLFTFGKGSSLCLG 984
Query: 349 TG 350
G
Sbjct: 985 HG 986
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 91/239 (38%), Gaps = 50/239 (20%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
G+LG GS+ VP +E F D KTN I V AG +L + G
Sbjct: 828 GRLGNGGSSDHGVPEPVELF-----------DEKTN------IVEVAAGHAFNLVLTQDG 870
Query: 92 ALWMWGNCPLPDSSTEGGFSL-VSSFTPSP--VWDFHGHTVVKVACGSEHVVALVSAGET 148
++ WG GG S+ V S P V VV VA G H A+ GE
Sbjct: 871 KIFTWGRNEQGQLGLGGGISMDVYSMEAVPLLVEALESKKVVHVAAGHSHSAAVTEEGE- 929
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y WG + L P++ D W +V CG HTA++T
Sbjct: 930 -------LYMWGMKIH-----------LEPQVFRVGEGDKVW---QVGCGGSHTAVVTED 968
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+TFG G + LGHGT P+ V + +V V CG H +V++
Sbjct: 969 AH-------QLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHRHMAVIT 1020
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 113/307 (36%), Gaps = 71/307 (23%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP-----VWDFHG 126
+KI V G + AID G LW WG G + P P + D+ G
Sbjct: 739 VKIVKVACGDFHTAAIDEDGRLWTWGWGGSLFGGIGGLGHGDEAEQPRPKVVRSLVDY-G 797
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
V VACG +H + L GE + G G+LG G P+ +E F++
Sbjct: 798 CRVGSVACGEKHTLILTDDGE--------VLTAGNGEYGRLGNGGSSDHGVPEPVELFDE 849
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ------LGHGTTQSALV 240
+ + EV G +LT + +T+G E GQ + V
Sbjct: 850 KT--NIVEVAAGHAFNLVLTQ--------DGKIFTWGRNEQGQLGLGGGISMDVYSMEAV 899
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI-- 298
P V+ L + +V V G H++ V+ G+++ WGM+ + L P + R GD +
Sbjct: 900 PLLVEAL-ESKKVVHVAAGHSHSAAVTEEGELYMWGMK--IHLEPQ--VFRVGEGDKVWQ 954
Query: 299 ---------------SPILISGNGP-----HGPKFQDP--------------VQVACGAA 324
+ G G HG + P V+VACG
Sbjct: 955 VGCGGSHTAVVTEDAHQLFTFGKGSSLCLGHGTRSYTPHPKLVADGLAGRGVVKVACGHR 1014
Query: 325 HTVLVTD 331
H ++TD
Sbjct: 1015 HMAVITD 1021
>gi|410903564|ref|XP_003965263.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like
[Takifugu rubripes]
Length = 3883
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 122/285 (42%), Gaps = 36/285 (12%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ K+ S K +LAI G ++ WG+ G S +
Sbjct: 463 HRNIKKVSSSKGSDGHTLAITVDGEVFSWGDGEY--GKLGHGNSATQKYPKIIQGPLFSK 520
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV + G H A+ GE Y+WG + G+LG D +SR P +++ +
Sbjct: 521 IVVSASAGYRHSAAVTKDGE--------LYTWGEGDFGRLGHSDSQSRNMPTLVKDIS-- 570
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS HT + R W+FG G+NG+LGHG T P+ ++ L
Sbjct: 571 ---GVGQVACGSSHTIAVAQDGR-------TVWSFGGGDNGKLGHGDTNRVYRPKVIEAL 620
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + V G + ++SAG V++WG LG C ++ T ++ P +
Sbjct: 621 HGFI-IRKVCAGSQSSLALTSAGQVFAWGCGSCLG-CGSSETT------SLRPRFV---- 668
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ ++CG +H + ++ + ++++WG G G G T
Sbjct: 669 -EDLSITKIIDISCGDSHCLALSHEN-EVYAWGNNTMGQCGQGHT 711
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 127/294 (43%), Gaps = 72/294 (24%)
Query: 116 FTPSPVWDFHGHTVVKV--ACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P+ + F G+ V ++ +CGS+ H +AL GE + SWG + G+LG G+
Sbjct: 3091 YVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF--------SWGDGDFGKLGHGNN 3142
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT-----------------HRKRPNDML 215
E + RPK IE + V ++ CG H+A++T R N ML
Sbjct: 3143 ERQRRPKQIEALQGED---VVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKML 3199
Query: 216 ES----------------------------MCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
W FG G+ G+LG G++ + P++V++L
Sbjct: 3200 PERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQL 3259
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG + VV+ G V+++G E+ +GL P+ S+ +N + + P L
Sbjct: 3260 CNK-GMKKVCCGAQFSVVVACDGHVYTFGQERLIGL-PD-SMLKNRSNPQVVPSL----- 3311
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +D +A G H + ++ G +++WG G LG G P ++
Sbjct: 3312 -EGLFIED---IAVGCEHVLALSSTG-DVYAWGCNSEGQLGLGHCNPVKEPTLI 3360
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ PK + + V HT +T ++
Sbjct: 437 GKGSYGRLGLGDSNNQSLPKKLVLEPHRNIKKVSSSKGSDGHTLAIT--------VDGEV 488
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE G+LGHG + + P+ ++ +VS G H++ V+ G++++WG
Sbjct: 489 FSWGDGEYGKLGHGNSATQKYPKIIQGPLFSKIVVSASAGYRHSAAVTKDGELYTWGEGD 548
Query: 280 GLGLCPNASLTRNEAGDAISPIL---ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + S +RN P L ISG G QVACG++HT+ V DG +
Sbjct: 549 FGRLGHSDSQSRN------MPTLVKDISGVG----------QVACGSSHTIAVAQDGRTV 592
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
WS+G G +G LG G T + P ++
Sbjct: 593 WSFGGGDNGKLGHGDTNRVYRPKVI 617
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 118/271 (43%), Gaps = 38/271 (14%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
+++WGN + G V + PS +V CG + S G
Sbjct: 3022 VYLWGNGRYGQLAGTGTNLTVPTLAPSL------SQTQQVVCGQNCSFLIQSNG------ 3069
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-FHTALLTHRKRP 211
V + G G+LG G+ + P II F Q +CGS H+ LT
Sbjct: 3070 --VVTAVGEGQYGRLGQGNSDDLYVPTIISAF-QGYVVTQLVTSCGSDGHSMALTETGE- 3125
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+++G G+ G+LGHG + P+Q++ L Q +V + CG H++VV++ G
Sbjct: 3126 -------VFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGK 3177
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVT 330
++++G + + L + + + P ++ G H QV+CG HT++++
Sbjct: 3178 LFTFGSGE------SGRLGQRSTSNKMLPERVAALEGYHVG------QVSCGLNHTLVLS 3225
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
DG +W++G G G LG G + + P V
Sbjct: 3226 LDGMAVWAFGDGDYGKLGAGSSTAKYYPQKV 3256
>gi|218185898|gb|EEC68325.1| hypothetical protein OsI_36421 [Oryza sativa Indica Group]
Length = 425
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 129/312 (41%), Gaps = 62/312 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTV 129
K+ V AG S A+ G L+ WG +SS + G + TP V V
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGR----NSSGQLGLGKRAGKVVSTPRKVDCLADSRV 181
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL---------RPKI 180
VA GSEH +A GE SWGA G+LG G + S L P++
Sbjct: 182 KMVALGSEHSIATTEEGEVL--------SWGAAGAGRLGHGHKTSILGFSITTSEYTPRL 233
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
I+ + + + G H+A + + F G+ + G G + L
Sbjct: 234 IKNLDGVK---IKRIAAGMLHSACIDEKGT----------LFIFGQKTEKGFGRSGDELR 280
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P V+E+P + V CG +HT VV+ +GD++SWG + N L SP
Sbjct: 281 PTVVEEVP---FSEEVACGGYHTCVVTDSGDLYSWGSNE------NGCLGLGGTDMVRSP 331
Query: 301 ILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWG--------RGRS--GVLGT 349
++ + F+ PV +V+CG HT +++ W WG G S G LG
Sbjct: 332 EVLKSS-----LFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGH 386
Query: 350 GKTIDFFAPAIV 361
G +D+F P +V
Sbjct: 387 GNDVDYFEPMMV 398
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVV 130
+KI + AG + S ID G L+++G TE GF P+ V +
Sbjct: 240 VKIKRIAAGMLHSACIDEKGTLFIFGQ------KTEKGFGRSGDELRPTVVEEVP--FSE 291
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + +G+ YSWG+N NG LGLG + P+++++ P
Sbjct: 292 EVACGGYHTCVVTDSGD--------LYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFP- 342
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTF---GLGENGQLGHGTTQSALVPEQVKEL 247
V +V+CG HTA+++ TF G GQLGHG P V E
Sbjct: 343 -VSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV-EF 400
Query: 248 PQYVYLVSVDCGLFHTSVV 266
+ V V CG HT +
Sbjct: 401 GKNARAVHVSCGFNHTGAI 419
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY-----EVT 196
++S+GE G V WG + G+LG+G ESR P F P +
Sbjct: 20 MLSSGEPAAGRRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLA 79
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVS 255
CG HT LT R + GL + GQLG G++ + +L P +V + V V
Sbjct: 80 CGGAHTLFLTESGR--------VFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKV--VE 129
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V G H+ V++ G +++WG GLG ++ D ++ +
Sbjct: 130 VSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADSRVK------- 182
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA G+ H++ T++G L SWG +G LG G +I
Sbjct: 183 ------MVALGSEHSIATTEEGEVL-SWGAAGAGRLGHGHKTSILGFSIT 225
>gi|449522972|ref|XP_004168499.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like, partial [Cucumis
sativus]
Length = 806
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 115/269 (42%), Gaps = 57/269 (21%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
L + + V D HG +ACG H V + GE + SWG + G+LG G
Sbjct: 280 LPKALESTVVLDVHG-----IACGGRHAVLVTRQGEIF--------SWGEESGGRLGHGV 326
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQ 229
PKII+T S V V CG +HT +T L +T+G G + G
Sbjct: 327 EADVSHPKIIDTL---SGTNVELVACGEYHTCAVT--------LSGDLYTWGDGTHNYGL 375
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LGHG+ S +P++V + + + + CG +HT+VV+SAG ++++G + S
Sbjct: 376 LGHGSEVSHWIPQKVSGQMEGIRVSYISCGAWHTAVVTSAGQLFTFG---------DGSF 426
Query: 290 TRNEAGDAISPILISGNGPHGP---KFQDPVQVACGAAHTVL-------VTDDG------ 333
GD I+ N P + +VACG HT ++D G
Sbjct: 427 GALGHGDH-----ITSNFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPS 481
Query: 334 -YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
KL++WG G G LG G P V
Sbjct: 482 SRKLYTWGDGDKGRLGHGDNEPRLVPECV 510
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 33/265 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I++ + G + + +AG L+ +G+ + G + S+F P V G K
Sbjct: 397 IRVSYISCGAWHTAVVTSAGQLFTFGDGSF--GALGHGDHITSNF-PREVETLRGLRTTK 453
Query: 132 VACGSEHVVALVSA-------GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
VACG H A V A G + Y+WG + G+LG GD E RL P+ +
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
++ + +V CG+ T LT R +T G GQLG T L P V
Sbjct: 514 MEER---ICQVACGNDLTVALTTAGR--------VYTMGSTAYGQLGSATANGKL-PTCV 561
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ ++ V CG +H +V++S +V++WG KGL N L + +P ++
Sbjct: 562 EGEIANSFVEEVACGSYHVAVLTSKNEVYTWG--KGL----NGQLGHGDNNHRNTPTIVD 615
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLV 329
K + VACG+ TV++
Sbjct: 616 -----VLKDKQVKNVACGSKFTVVI 635
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ +G L+ WG+ + G S VS + P V G V ++CG
Sbjct: 347 VACGEYHTCAVTLSGDLYTWGD-GTHNYGLLGHGSEVSHWIPQKVSGQMEGIRVSYISCG 405
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H + SAG+ + ++G + G LG GD + P+ +ET +V
Sbjct: 406 AWHTAVVTSAGQLF--------TFGDGSFGALGHGDHITSNFPREVETLRG---LRTTKV 454
Query: 196 TCGSFHTALLTHRKRPNDMLES---------MCWTFGLGENGQLGHGTTQSALVPEQVKE 246
CG +HTA + N++ +S +T+G G+ G+LGHG + LVPE V
Sbjct: 455 ACGVWHTAAAV--EAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAA 512
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS----PIL 302
L + + V CG T +++AG V++ G S + G A + P
Sbjct: 513 LMEE-RICQVACGNDLTVALTTAGRVYTMG-----------STAYGQLGSATANGKLPTC 560
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G + F + +VACG+ H ++T ++++WG+G +G LG G P IV
Sbjct: 561 VEGEIAN--SFVE--EVACGSYHVAVLTSKN-EVYTWGKGLNGQLGHGDNNHRNTPTIV 614
Score = 42.4 bits (98), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAG 295
AL+P+ + E + + + CG H +V+ G+++SWG E G LG A ++ +
Sbjct: 278 ALLPKAL-ESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKII 336
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS--GVLGTGKTI 353
D +S + VACG HT VT G L++WG G G+LG G +
Sbjct: 337 DTLSGTNVE-------------LVACGEYHTCAVTLSG-DLYTWGDGTHNYGLLGHGSEV 382
Query: 354 DFFAPAIV 361
+ P V
Sbjct: 383 SHWIPQKV 390
>gi|357126800|ref|XP_003565075.1| PREDICTED: uncharacterized protein LOC100834588 [Brachypodium
distachyon]
Length = 1092
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
V G + A+ +G L+ WG+ G + +S + P + G V ++CG
Sbjct: 370 VACGEYHTCAVTLSGDLYTWGDGTF-KFGLLGHGNDISHWVPKKLHGPLEGIHVSSISCG 428
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H V + SAG+ +++G + G LG GDRES PK +E+
Sbjct: 429 PFHTVIVTSAGQ--------LFTFGDGSFGVLGHGDRESLSVPKEVESLKG---LRTVRA 477
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ G+LGHG +S LVP V L +
Sbjct: 478 ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCVAALVEPN 537
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V CG T ++++G V++ G + LG N D + P + G
Sbjct: 538 F-CQVACGHCLTVALTTSGHVYTMGSAVYGQLG---------NPQADGMLPARVEGK--L 585
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + +++CGA H ++T ++++WG+G +G LG G T D P +V
Sbjct: 586 HKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGNTDDKNTPTLV 634
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 106/248 (42%), Gaps = 47/248 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG +H + GE Y SWG + G+LG G PK+I+
Sbjct: 315 VQNISCGGKHAALVSKQGEIY--------SWGEESGGRLGHGVDCDVAHPKLIDALTH-- 364
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENGQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G + G LGHG S VP+++
Sbjct: 365 -MNIELVACGEYHTCAVT--------LSGDLYTWGDGTFKFGLLGHGNDISHWVPKKLHG 415
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILIS 304
+ +++ S+ CG FHT +V+SAG ++++G LG SL+ + +++ +
Sbjct: 416 PLEGIHVSSISCGPFHTVIVTSAGQLFTFGDGSFGVLGHGDRESLSVPKEVESLKGLRT- 474
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTI 353
V+ ACG HT V + K+++WG G G LG G
Sbjct: 475 ------------VRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKE 522
Query: 354 DFFAPAIV 361
P V
Sbjct: 523 SRLVPTCV 530
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 98/254 (38%), Gaps = 77/254 (30%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G ++ + +AG L+ +G +G F ++ S P V
Sbjct: 420 IHVSSISCGPFHTVIVTSAGQLFTFG---------DGSFGVLGHGDRESLSVPKEVESLK 470
Query: 126 GHTVVKVACGSEHVVALVS--AGETYKGEDLV--CYSWGANNNGQLGLGDRESRLRPKII 181
G V+ ACG H A+V AG + ++WG + G+LG GD+ESRL P +
Sbjct: 471 GLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKESRLVPTCV 530
Query: 182 ETFNQ---------------------------------DSPWA----------------V 192
+ +P A V
Sbjct: 531 AALVEPNFCQVACGHCLTVALTTSGHVYTMGSAVYGQLGNPQADGMLPARVEGKLHKNFV 590
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
E++CG++H A+LT R + +T+G G NG+LGHG T P V+ L
Sbjct: 591 EEISCGAYHVAVLTSR--------TEVYTWGKGANGRLGHGNTDDKNTPTLVEALKDK-Q 641
Query: 253 LVSVDCGLFHTSVV 266
+ +V CG T+ +
Sbjct: 642 VRNVVCGTNFTAAI 655
>gi|195170687|ref|XP_002026143.1| GL16177 [Drosophila persimilis]
gi|194111023|gb|EDW33066.1| GL16177 [Drosophila persimilis]
Length = 1052
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 132/305 (43%), Gaps = 58/305 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN--CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + G S+A+ G + WG+ C ST+ + P + TVV+
Sbjct: 88 VIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIEL----PKILRFLVSRTVVQ 143
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG------LGDRESRLRPKIIETFN 185
+ACG+ H +AL S GE YSWG+N GQLG L + LR I
Sbjct: 144 IACGNNHSLALTSCGE--------LYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGI- 194
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQ 243
P A + CG H+ L++ FG G+N GQLG Q+ P Q
Sbjct: 195 ---PLAT--IACGGNHSFLISKSSA----------VFGWGKNTCGQLGLNDEQNRAYPSQ 239
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAIS 299
+K + + + + V CG ++ +++ G V++ G + G G+ N + R
Sbjct: 240 LKSM-RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGVSNNEMIPR-------- 290
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
++I G QVACG HT+ + G +++S+G G SG LGT TI P
Sbjct: 291 -MVIELMG------STITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPK 343
Query: 360 IVLWP 364
+V+ P
Sbjct: 344 VVIGP 348
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ Y WG ++GQLGLG + E L P IE F DSP V ++ CG HT LT +
Sbjct: 1 MALYCWGDASHGQLGLGGIENEQILLPSQIE-FKPDSP--VQQIACGHRHTLFLTANGQ- 56
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ G ++ QLGH +P + EL YV ++ + CG H+ ++ G
Sbjct: 57 -------VYACGNNDHHQLGHELPTKRPLP--IPELQAYV-VIQIACGSRHSMALTEWGQ 106
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+ SWG + G +++ I L+S + VQ+ACG H++ +T
Sbjct: 107 ILSWG-DNDCGQVGHSTDNDVIELPKILRFLVS---------RTVVQIACGNNHSLALTS 156
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDF 355
G +L+SWG G LG D
Sbjct: 157 CG-ELYSWGSNIYGQLGVQSPKDL 179
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 103/259 (39%), Gaps = 35/259 (13%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
AL+ WG+ GG PS + V ++ACG H + L + G+ Y
Sbjct: 2 ALYCWGDASHGQLGL-GGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVY-- 58
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
NN LG RP I + V ++ CGS H+ LT
Sbjct: 59 --------ACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSRHSMALT----- 102
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + + W G + GQ+GH T + ++ +V + CG H+ ++S G+
Sbjct: 103 -EWGQILSW--GDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGE 159
Query: 272 VWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
++SWG + LG+ L + A ++ IL G +ACG H+ L+
Sbjct: 160 LYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTIL-------GIPL---ATIACGGNHSFLI 209
Query: 330 TDDGYKLWSWGRGRSGVLG 348
+ ++ WG+ G LG
Sbjct: 210 SKSS-AVFGWGKNTCGQLG 227
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 31/178 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHT 128
I + ++ GG S I + A++ WG +T G L + PS +
Sbjct: 194 IPLATIACGGNHSFLISKSSAVFGWG------KNTCGQLGLNDEQNRAYPSQLKSMRTLG 247
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQD 187
V V CG E+ V L + G ++ GA N GQLG G + + P+ +IE
Sbjct: 248 VRFVTCGDEYSVFLTNEGGV--------FTCGAGNYGQLGHGVSNNEMIPRMVIELMGS- 298
Query: 188 SPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ +V CG+ HT AL+ R ++FGLG +GQLG T S +P+ V
Sbjct: 299 ---TITQVACGNRHTLALVPSGGR--------VYSFGLGASGQLGTRNTISQTLPKVV 345
>gi|260781262|ref|XP_002585738.1| hypothetical protein BRAFLDRAFT_111359 [Branchiostoma floridae]
gi|229270775|gb|EEN41749.1| hypothetical protein BRAFLDRAFT_111359 [Branchiostoma floridae]
Length = 403
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/325 (29%), Positives = 143/325 (44%), Gaps = 55/325 (16%)
Query: 42 SLVPCVIEQFLTIGAPD--SLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNC 99
+L P V + L +G+ D +E++ +T P V+ G SL + +G G
Sbjct: 26 NLRPLVNDDKLPMGSMDLTDIEENDQTKSSEPSSC--VEDG---SLLVWGSGEFGQTGQG 80
Query: 100 PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSW 159
+ D G LV+ F P +G V +ACG+ H + + E Y +W
Sbjct: 81 RVGDVGVTEG--LVAEFPPK-----NGARVKLLACGASHSIVVTVDNEVY--------AW 125
Query: 160 GANNNGQLGLGDRESRLRPKIIE-TFNQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLES 217
G ++GQLG GD+E+RL P I T NQD P V +TCGS H+ A LT+ K
Sbjct: 126 GNGHSGQLGCGDKETRLAPTRIHLTDNQDLP-DVAGITCGSRHSFAWLTNGK-------- 176
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKE--LPQYVY--LVSVDCGLFHTSVVSSAGDVW 273
C++FG QL + Q++ L +V+ +V V CG HT ++ G V
Sbjct: 177 -CYSFGNNYYAQLAYNFRIQNYKENQLRPTLLEMFVHRKVVHVACGDRHTLFLTQEGRVA 235
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
+ G N L E D + P ++ G + +ACG+ H++ T G
Sbjct: 236 ACGNNA------NGQLGTGEPSDMVCPKMLDG-------LEGVSCIACGSYHSLAATGAG 282
Query: 334 YKLWSWGRGRSGVLGTGKTIDFFAP 358
L+ WG G+ GT K D AP
Sbjct: 283 -DLYVWGSGKP--CGTRKG-DILAP 303
>gi|218201187|gb|EEC83614.1| hypothetical protein OsI_29322 [Oryza sativa Indica Group]
Length = 395
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 147/358 (41%), Gaps = 64/358 (17%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK---TNHKAPIKICSVKAGG 81
SL C DG+L G N Q T+G P + +S + A + I GG
Sbjct: 55 NSLAICADGRLFTWGWN--------QRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106
Query: 82 MMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
LA+D+ G + WG C E G + P P V +VA G
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQRCAPKLKVRQVAAGG 166
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H V L G ++WG GD + P ++ V +
Sbjct: 167 THSVVLTQDGH--------VWTWGQ----PWPPGDIKQISTPVRVQGLEN-----VKVIA 209
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G+FH LT + + W +G E GQLG G TQ P +V+ L + LV +
Sbjct: 210 VGAFHNLALTE--------DGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSD-LSLVDI 260
Query: 257 DCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
G +H++ ++ G+V++WG + G G ++ + + L++G
Sbjct: 261 AAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKV------ELLAG------- 307
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP---AIVLWPPLT 367
+D +QV+CG H+V +T DG +++S+GRG G LG G+ + P I L PP T
Sbjct: 308 -EDIIQVSCGGTHSVALTRDG-RMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGT 363
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 35/263 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K+ V AGG S+ + G +W WG P P G +S TP V V
Sbjct: 157 LKVRQVAAGGTHSVVLTQDGHVWTWGQ-PWP----PGDIKQIS--TPVRVQGLE--NVKV 207
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G+ H +AL ED + ++WG N GQLG GD + R +P +E + S
Sbjct: 208 IAVGAFHNLALT--------EDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLS--- 256
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA-LVPEQVKELPQY 250
+ ++ G +H+ LT E + +G GE+G+LG G +S+ +VP++V EL
Sbjct: 257 LVDIAAGGWHSTALTK--------EGEVYAWGRGEHGRLGFGDDKSSHMVPQKV-ELLAG 307
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN---EAGDAISPILISGNG 307
++ V CG H+ ++ G ++S+G L +T E + P SG G
Sbjct: 308 EDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSG-G 366
Query: 308 PHGPKFQDPVQVACGAAHTVLVT 330
G ++Q VACG HT+ +
Sbjct: 367 DSGGQWQ-ARYVACGGRHTLAIA 388
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 27/190 (14%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLG+G E + + + AV V GS ++ + R
Sbjct: 15 AWGSGEDGQLGMGGYEEEDWARGVAALDA---LAVSAVVAGSRNSLAICADGR------- 64
Query: 218 MCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ P V L V +V G +H V G ++WG
Sbjct: 65 -LFTWGWNQRGTLGHPPETKTESSPAPVDALAG-VSIVQAAIGGWHCLAVDDKGRAYAWG 122
Query: 277 MEKGLGLCPNASLTRNEAGDAIS---PILISGNGPH--GPKFQDPVQVACGAAHTVLVTD 331
+ G C + + + A+ PI P PK + QVA G H+V++T
Sbjct: 123 GNE-YGQCGEEAERKEDGTRALRRDIPI------PQRCAPKLK-VRQVAAGGTHSVVLTQ 174
Query: 332 DGYKLWSWGR 341
DG+ +W+WG+
Sbjct: 175 DGH-VWTWGQ 183
>gi|54261597|gb|AAH84600.1| LOC495281 protein, partial [Xenopus laevis]
Length = 1031
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 96/236 (40%), Gaps = 29/236 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I+I V G SLA+ ++ WG G + P + G
Sbjct: 121 IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGL--GSEIKKESAPRHIKSLAGIPFAH 178
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G H AL +G + WG N GQLGL D R P ++++
Sbjct: 179 IAAGGGHSFALTMSG--------AIFGWGRNKFGQLGLNDETDRSAPALLKSLRSQK--- 227
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ + CG HTA LT E +TFG G GQLGH +T + P +V EL +
Sbjct: 228 IIHICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSTNHEVNPRKVFELMGSI 279
Query: 252 YLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + CG HT + V S+G ++S+ GL N L + SP + GN
Sbjct: 280 -VTQIACGRQHTLAFVPSSGRIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 328
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/303 (26%), Positives = 132/303 (43%), Gaps = 46/303 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG+ + + G S+ + P + + +V+
Sbjct: 70 IVAVSCGEAHTLALNDKGQVFSWGHA----AHGQIGLSVAEDYIRVPRNIKSLYDIQIVQ 125
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPW 190
VACG H +AL + Y SWG N GQLGLG + P+ I++ P+
Sbjct: 126 VACGHHHSLALSKESDIY--------SWGQNQYGQLGLGSEIKKESAPRHIKSL-AGIPF 176
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A + G H+ LT + + +G + GQLG P +K L +
Sbjct: 177 A--HIAAGGGHSFALT--------MSGAIFGWGRNKFGQLGLNDETDRSAPALLKSL-RS 225
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++ + CG HT+ ++ G V+++G G G L N ++P +
Sbjct: 226 QKIIHICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTNHEVNPRKV------- 272
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
F+ Q+ACG HT+ +++S+G G +G LGTG T + +P V L
Sbjct: 273 --FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTVKGNWL 330
Query: 367 TEE 369
T E
Sbjct: 331 THE 333
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 102/239 (42%), Gaps = 34/239 (14%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F V V CGS H V ++ G Y+ G N+ GQ LG +SR +P +
Sbjct: 15 FINKNVRDVGCGSRHTVFVLDDG--------TVYTCGCNDLGQ--LGHDKSRKKPDQVGA 64
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPE 242
+ + + V+CG HT L ND + W G +GQ+G + + VP
Sbjct: 65 LDAQT---IVAVSCGEAHTLAL------NDKGQVFSW--GHAAHGQIGLSVAEDYIRVPR 113
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+K L + +V V CG H+ +S D++SWG + L + + + A I +
Sbjct: 114 NIKSLYD-IQIVQVACGHHHSLALSKESDIYSWGQNQYGQLGLGSEIKKESAPRHIKSLA 172
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G F +A G H+ +T G ++ WGR + G LG D APA++
Sbjct: 173 -------GIPF---AHIAAGGGHSFALTMSG-AIFGWGRNKFGQLGLNDETDRSAPALL 220
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 106/239 (44%), Gaps = 38/239 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V T+V V+CG H +AL G+ +SWG +GQ+GL E +R
Sbjct: 59 PDQVGALDAQTIVAVSCGEAHTLALNDKGQV--------FSWGHAAHGQIGLSVAEDYIR 110
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-T 235
P+ I++ + +V CG H+ L+ ES +++G + GQLG G+
Sbjct: 111 VPRNIKSLYD---IQIVQVACGHHHSLALSK--------ESDIYSWGQNQYGQLGLGSEI 159
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNE 293
+ P +K L + + G H+ ++ +G ++ WG K LGL N+
Sbjct: 160 KKESAPRHIKSLAG-IPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGL--------ND 210
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
D +P L+ + Q + + CG HT +T +G ++++G G G LG T
Sbjct: 211 ETDRSAPALLK-----SLRSQKIIHICCGEDHTAALTKEG-GVFTFGAGGYGQLGHNST 263
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 84/206 (40%), Gaps = 38/206 (18%)
Query: 50 QFLTIGAPDSLEDDSKTNH---KAPIKICSVKAGGMMSLAIDNAGALWMWGNCP-----L 101
Q+ +G ++ +S H A I + AGG S A+ +GA++ WG L
Sbjct: 149 QYGQLGLGSEIKKESAPRHIKSLAGIPFAHIAAGGGHSFALTMSGAIFGWGRNKFGQLGL 208
Query: 102 PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
D + +L+ S ++ + CG +H AL G +++GA
Sbjct: 209 NDETDRSAPALLKS--------LRSQKIIHICCGEDHTAALTKEGGV--------FTFGA 252
Query: 162 NNNGQLGLGDRESRLRP-KIIETFNQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMC 219
GQLG + P K+ E V ++ CG HT A + R
Sbjct: 253 GGYGQLGHNSTNHEVNPRKVFELMGS----IVTQIACGRQHTLAFVPSSGR--------I 300
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVK 245
++FGLG NGQLG G+T + P VK
Sbjct: 301 YSFGLGGNGQLGTGSTSNRKSPFTVK 326
>gi|224105957|ref|XP_002313993.1| predicted protein [Populus trichocarpa]
gi|222850401|gb|EEE87948.1| predicted protein [Populus trichocarpa]
Length = 1104
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 131/290 (45%), Gaps = 30/290 (10%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ +G L+ WG+ + G + VS + P V G V ++CG
Sbjct: 367 VACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVSSISCG 425
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GDR+S PK +E+ +
Sbjct: 426 PWHTAVVTSAGQ--------LFTFGDGTFGVLGHGDRKSISLPKEVESLKG---LRTVQA 474
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ G+LGHG ++ LVP V L +
Sbjct: 475 ACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 534
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T +++G V++ G P N D P + G
Sbjct: 535 F-CQVACGHSLTVARTTSGHVYTMG-------SPVYGQLGNPLADGKLPTRVEGK--LSK 584
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + ++ACGA H ++T ++++WG+G +G LG G T D +P++V
Sbjct: 585 SFVE--EIACGAYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNSPSLV 631
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 109/248 (43%), Gaps = 47/248 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H + GE +SWG + G+LG G + PK+I+ + +
Sbjct: 312 VQNIACGGQHAALVTKQGE--------IFSWGEESGGRLGHGVDSDVMHPKLIDALSNTN 363
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G G LGHG S VP++V
Sbjct: 364 ---IELVACGEYHTCAVT--------LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 412
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ +++ S+ CG +HT+VV+SAG ++++ G LG S++ + +++ +
Sbjct: 413 PLEGIHVSSISCGPWHTAVVTSAGQLFTFGDGTFGVLGHGDRKSISLPKEVESLKGLRT- 471
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTI 353
VQ ACG HT V + KL++WG G G LG G
Sbjct: 472 ------------VQAACGVWHTAAVIEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 519
Query: 354 DFFAPAIV 361
P V
Sbjct: 520 AKLVPTCV 527
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 78/180 (43%), Gaps = 31/180 (17%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG+ D G + P+ V +VACG VA ++G Y
Sbjct: 500 GKLFTWGDG---DKGRLGHGDKEAKLVPTCVAALVEPNFCQVACGHSLTVARTTSGHVY- 555
Query: 151 GEDLVCYSWGANNNGQLGL----GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ G+ GQLG G +R+ K+ ++F V E+ CG++H A+LT
Sbjct: 556 -------TMGSPVYGQLGNPLADGKLPTRVEGKLSKSF-------VEEIACGAYHVAVLT 601
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+ + +T+G G NG+LGHG T P V+ L + S+ CG T+ +
Sbjct: 602 SK--------TEVYTWGKGANGRLGHGDTDDRNSPSLVEALKDK-QVKSIACGTSFTAAI 652
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 66/157 (42%), Gaps = 36/157 (22%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-------CPLPD----SSTEGGFSLVSSFTPSPVW 122
C V G +++A +G ++ G+ PL D + EG S SF
Sbjct: 535 FCQVACGHSLTVARTTSGHVYTMGSPVYGQLGNPLADGKLPTRVEGKLS--KSF------ 586
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
V ++ACG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 587 ------VEEIACGAYHVAVLTSKTEVY--------TWGKGANGRLGHGDTDDRNSPSLVE 632
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + K + + +SMC
Sbjct: 633 ALKDKQ---VKSIACGTSFTAAICLHKWVSGVDQSMC 666
Score = 46.2 bits (108), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 63/136 (46%), Gaps = 19/136 (13%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLT 290
G +L P+ + E + + ++ CG H ++V+ G+++SWG E G LG ++ +
Sbjct: 293 GVKMDSLFPKAL-ESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESGGRLGHGVDSDVM 351
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLG 348
+ DA+S I VACG HT VT G L++WG G G+LG
Sbjct: 352 HPKLIDALSNTNIE-------------LVACGEYHTCAVTLSG-DLYTWGDGTYNFGLLG 397
Query: 349 TGKTIDFFAPAIVLWP 364
G + + P V P
Sbjct: 398 HGNEVSHWVPKRVNGP 413
>gi|297603670|ref|NP_001054420.2| Os05g0106700 [Oryza sativa Japonica Group]
gi|255675937|dbj|BAF16334.2| Os05g0106700 [Oryza sativa Japonica Group]
Length = 685
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 123/290 (42%), Gaps = 44/290 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG +S G +++ S P P+ V V CG H
Sbjct: 32 DSLGDVYVWGEVFCENSVRVGSDTIIRSTEKTDFLLPKPLESRLVLDVYHVDCGVRHAAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ G+ + +WG ++ G+LG G RE + P+++E+ + V V CG FH
Sbjct: 92 VTRNGDVF--------TWGEDSGGRLGHGTREDSVHPRLVESL---AACNVDFVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHGT +P+++ + + V CG +
Sbjct: 141 TCAVTTTG------ELYTWGDGTHNVGLLGHGTDAGHWIPKRISGALDGLPVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + +LT + + G K + VAC
Sbjct: 195 HTALITSMGQLFTFG-DGSFGVLGHGNLTSISCPKEVESL-------SGLK---TIAVAC 243
Query: 322 GAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 244 GVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCV 293
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/298 (27%), Positives = 128/298 (42%), Gaps = 47/298 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
V G + A+ G L+ WG N L T+ G + + + G V V
Sbjct: 134 VACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDAGHWIPKRISGA----LDGLPVAYV 189
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CG+ H + S G+ + ++G + G LG G+ S PK +E+ S
Sbjct: 190 SCGTWHTALITSMGQLF--------TFGDGSFGVLGHGNLTSISCPKEVESL---SGLKT 238
Query: 193 YEVTCGSFHTA-----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V CG +HTA ++TH + + +T+G G+ +LGHG +S L P V L
Sbjct: 239 IAVACGVWHTAAIVEVIVTHSS--SSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASL 296
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISG 305
Y + V CG T ++++G V S G + LG N D P L+
Sbjct: 297 IDYDFY-RVACGHSLTVCLTTSGKVLSMGNSVYGQLG---------NPNSDGRLPCLVED 346
Query: 306 N--GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G H +QVACG+ H ++T ++++WG+G +G LG G D P V
Sbjct: 347 RIAGEH------VLQVACGSYHVAVLTGRS-EVFTWGKGANGRLGHGDIEDRKVPTQV 397
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 29/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + V G + I + G L+ +G+ G +L S P V G +
Sbjct: 184 LPVAYVSCGTWHTALITSMGQLFTFGDGSF---GVLGHGNLTSISCPKEVESLSGLKTIA 240
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V T+ + ++WG + +LG GD+ESRL+P + +
Sbjct: 241 VACGVWHTAAIVEVIVTHSSSSVSAGKLFTWGDGDKHRLGHGDKESRLKPTCVASLID-- 298
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ Y V CG T LT + M S+ GQLG+ + L P V++
Sbjct: 299 -YDFYRVACGHSLTVCLTTSGKVLSMGNSV--------YGQLGNPNSDGRL-PCLVEDRI 348
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+++ V CG +H +V++ +V++WG KG N L + D P +
Sbjct: 349 AGEHVLQVACGSYHVAVLTGRSEVFTWG--KG----ANGRLGHGDIEDRKVPTQV----- 397
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + +ACGA T +
Sbjct: 398 EALKDRAVRHIACGANFTAAI 418
>gi|340501848|gb|EGR28585.1| regulator of chromosome condensation, putative [Ichthyophthirius
multifiliis]
Length = 612
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 123/274 (44%), Gaps = 38/274 (13%)
Query: 88 DNAGALWMWG--------NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
D G L+ WG N P ++ + +F P V+ +++V+CG +H
Sbjct: 128 DAIGVLYSWGQNTEGQMGNVYDPKTNNPKHRKIKINF-PKLVYPLKDSIIIQVSCGYQHS 186
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ T+ G LV WG N++ QLGLG S P I + V+C
Sbjct: 187 VAI-----TFNGNVLV---WGDNSSSQLGLGINSPNSIYYPVQIPNIQN-----IINVSC 233
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
GS HT L +R + +++G GE G LGH + P+ + + Q + + +
Sbjct: 234 GSEHTLALDNRNQ--------VYSWGNGEGGLLGHSNEEIQASPKIIDKF-QDLQVEFII 284
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
CG H+ ++ G V+SWG +G L N + ++ P I G G +
Sbjct: 285 CGGLHSLALTKKGHVYSWGRNEGGQLGLNQDVLKDNLYFCCLPEKICGQ-LEGVFVK--- 340
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
Q+A G AH++ + +G +++ WG +G LG G+
Sbjct: 341 QIAAGDAHSLALAQNG-QVFGWGYNINGQLGLGQ 373
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 97/212 (45%), Gaps = 34/212 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVVKV 132
I V G S+AI G + +WG+ +SS++ G + S + PV + ++ V
Sbjct: 176 IIQVSCGYQHSVAITFNGNVLVWGD----NSSSQLGLGINSPNSIYYPVQIPNIQNIINV 231
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+CGSEH +AL + + YSWG G LG + E + PKII+ F QD V
Sbjct: 232 SCGSEHTLALDNRNQV--------YSWGNGEGGLLGHSNEEIQASPKIIDKF-QD--LQV 280
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL--------VPEQV 244
+ CG H+ LT + +++G E GQL G Q L +PE++
Sbjct: 281 EFIICGGLHSLALTKK--------GHVYSWGRNEGGQL--GLNQDVLKDNLYFCCLPEKI 330
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ V++ + G H+ ++ G V+ WG
Sbjct: 331 CGQLEGVFVKQIAAGDAHSLALAQNGQVFGWG 362
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 44/214 (20%)
Query: 155 VCYSWGANNNGQLGL-------GDRESRLR---PKIIETFNQDSPWAVYEVTCGSFHTAL 204
V YSWG N GQ+G + +++ PK++ +DS + +V+CG H+
Sbjct: 132 VLYSWGQNTEGQMGNVYDPKTNNPKHRKIKINFPKLVYPL-KDS--IIIQVSCGYQHSVA 188
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYVYLVSVDCGLFH 262
+T +G + QLG G S P Q+ P +++V CG H
Sbjct: 189 IT--------FNGNVLVWGDNSSSQLGLGINSPNSIYYPVQI---PNIQNIINVSCGSEH 237
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA-- 320
T + + V+SWG +G GL ++ NE A SP +I KFQD +QV
Sbjct: 238 TLALDNRNQVYSWGNGEG-GLLGHS----NEEIQA-SPKIID-------KFQD-LQVEFI 283
Query: 321 -CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
CG H++ +T G+ ++SWGR G LG + +
Sbjct: 284 ICGGLHSLALTKKGH-VYSWGRNEGGQLGLNQDV 316
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 12/95 (12%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD---R 172
+ P + F+ V+ ++CG H +A V A + + ++WG N +GQLG+GD
Sbjct: 447 YIPKRMDCFYQMPVLHLSCGHNHSLAFVLADTKH----YMVFAWGMNKHGQLGIGDTGQN 502
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
S RP T+ QD Y + CGS+H+ L+ +
Sbjct: 503 SSMARPI---TYLQD--IIAYSMACGSYHSLLIIN 532
Score = 42.0 bits (97), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 70/309 (22%), Positives = 112/309 (36%), Gaps = 117/309 (37%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGG-FSLVSSFTPSPVW----------DFHGHT 128
GG+ SLA+ G ++ WG EGG L ++ G
Sbjct: 286 GGLHSLALTKKGHVYSWG-------RNEGGQLGLNQDVLKDNLYFCCLPEKICGQLEGVF 338
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR---PKIIETFN 185
V ++A G H +AL G+ + WG N NGQLGLG ++S + PK I+
Sbjct: 339 VKQIAAGDAHSLALAQNGQVF--------GWGYNINGQLGLGQQQSDKQVSEPKQIKNLQ 390
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--------HGTTQS 237
+ + +V C C GL + QLG T
Sbjct: 391 K-----IEKVFC---------------------C---GLNDQNQLGIEKLPIKIQNTHNQ 421
Query: 238 ALVPEQVKELPQY-----------VYL------------VSVDCGLFHTSVVSSAGD--- 271
+++ + + + QY +Y+ + + CG H+ A
Sbjct: 422 SILNQNINIIDQYKANDNSKNNNNIYIPKRMDCFYQMPVLHLSCGHNHSLAFVLADTKHY 481
Query: 272 -VWSWGMEK----GLG-LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGA 323
V++WGM K G+G N+S+ R PI QD + +ACG+
Sbjct: 482 MVFAWGMNKHGQLGIGDTGQNSSMAR--------PITY---------LQDIIAYSMACGS 524
Query: 324 AHTVLVTDD 332
H++L+ +D
Sbjct: 525 YHSLLIIND 533
>gi|334329483|ref|XP_003341232.1| PREDICTED: x-linked retinitis pigmentosa GTPase regulator-like
[Monodelphis domestica]
Length = 1170
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 85/311 (27%), Positives = 131/311 (42%), Gaps = 75/311 (24%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
P K+ G +L G ++ G L D+ F LVS FT
Sbjct: 86 PEKVKIAACGRNHTLVYTEEGKVYAAGGNSEGQLGLGDTEERTTFQLVSFFTAQ------ 139
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
H + +++ GS AL ED V + WG N+ GQ+GL + + P + T
Sbjct: 140 -HKIKQLSAGSNTSAALT--------EDGVLFMWGDNSEGQIGLAEEANVCVPSEV-TIG 189
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ W ++CG +H+A +T E +TFG ENG+LG L PEQ+K
Sbjct: 190 KPISW----ISCGYYHSAFVT--------TEGELYTFGEPENGKLG-------LSPEQLK 230
Query: 246 --ELPQYVYLV-----SVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEA 294
+PQ V + V CG HT V + +V+++G+ + GLG
Sbjct: 231 NHRIPQLVLGIPGKVNQVACGGGHT-VALTEEEVYTFGLGQFGQLGLGT----------- 278
Query: 295 GDAISPILISGNGPHGPKF---QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ + P K Q +ACG HT L++D G+ ++++G GR G LG G+
Sbjct: 279 ------FIFETSEPKVVKHLQNQKIQYIACGENHTALISDTGH-MYTFGDGRHGKLGLGQ 331
Query: 352 T--IDFFAPAI 360
+ F P +
Sbjct: 332 ENFTNQFVPTL 342
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 131/289 (45%), Gaps = 49/289 (16%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGS 136
G + I L+M+G S+ G L S T P+ V V ACG
Sbjct: 43 GDEHTALITGNSKLYMFG------SNNWGQLGLGSKTTVNKPTCVKALKPEKVKIAACGR 96
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H + G+ Y+ G N+ GQLGLGD E R +++ F + + +++
Sbjct: 97 NHTLVYTEEGK--------VYAAGGNSEGQLGLGDTEERTTFQLVSFFT--AQHKIKQLS 146
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
GS +A LT + + + +G GQ+G + VP +V + + + +S
Sbjct: 147 AGSNTSAALTE--------DGVLFMWGDNSEGQIGLAEEANVCVPSEVT-IGKPISWIS- 196
Query: 257 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
CG +H++ V++ G+++++G E G LGL P + + P L+ G
Sbjct: 197 -CGYYHSAFVTTEGELYTFGEPENGKLGLSP------EQLKNHRIPQLVLG-------IP 242
Query: 315 DPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI-DFFAPAIV 361
V QVACG HTV +T++ +++++G G+ G LG G I + P +V
Sbjct: 243 GKVNQVACGGGHTVALTEE--EVYTFGLGQFGQLGLGTFIFETSEPKVV 289
>gi|449442447|ref|XP_004138993.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101222790 [Cucumis sativus]
Length = 982
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/269 (29%), Positives = 115/269 (42%), Gaps = 57/269 (21%)
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
L + + V D HG +ACG H V + GE + SWG + G+LG G
Sbjct: 280 LPKALESTVVLDVHG-----IACGGRHAVLVTRQGEIF--------SWGEESGGRLGHGV 326
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQ 229
PKII+T S V V CG +HT +T L +T+G G + G
Sbjct: 327 EADVSHPKIIDTL---SGTNVELVACGEYHTCAVT--------LSGDLYTWGDGTHNYGL 375
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LGHG+ S +P++V + + + + CG +HT+VV+SAG ++++G + S
Sbjct: 376 LGHGSEVSHWIPQKVGGQMEGIRVSYISCGAWHTAVVTSAGQLFTFG---------DGSF 426
Query: 290 TRNEAGDAISPILISGNGPHGP---KFQDPVQVACGAAHTVL-------VTDDG------ 333
GD I+ N P + +VACG HT ++D G
Sbjct: 427 GALGHGDHITS-----NFPREVETLRGLRTTKVACGVWHTAAAVEAINELSDSGTSASPS 481
Query: 334 -YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
KL++WG G G LG G P V
Sbjct: 482 SRKLYTWGDGDKGRLGHGDNEPRLVPECV 510
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 115/265 (43%), Gaps = 33/265 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I++ + G + + +AG L+ +G+ + G + S+F P V G K
Sbjct: 397 IRVSYISCGAWHTAVVTSAGQLFTFGDGSF--GALGHGDHITSNF-PREVETLRGLRTTK 453
Query: 132 VACGSEHVVALVSA-------GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
VACG H A V A G + Y+WG + G+LG GD E RL P+ +
Sbjct: 454 VACGVWHTAAAVEAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAAL 513
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
++ + +V CG+ T LT R +T G GQLG T L P V
Sbjct: 514 IEER---ICQVACGNDLTVALTTAGR--------VYTMGSTAYGQLGSATANGKL-PTCV 561
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ ++ V CG +H +V++S +V++WG KGL N L + +P ++
Sbjct: 562 EGEIANSFVEEVACGSYHVAVLTSKNEVYTWG--KGL----NGQLGHGDNNHRNTPTIVD 615
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLV 329
K + VACG+ TV++
Sbjct: 616 -----VLKDKQVKNVACGSKFTVVI 635
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 134/299 (44%), Gaps = 45/299 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVVKVACG 135
V G + A+ +G L+ WG+ + G S VS + P V G V ++CG
Sbjct: 347 VACGEYHTCAVTLSGDLYTWGD-GTHNYGLLGHGSEVSHWIPQKVGGQMEGIRVSYISCG 405
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H + SAG+ +++G + G LG GD + P+ +ET +V
Sbjct: 406 AWHTAVVTSAGQ--------LFTFGDGSFGALGHGDHITSNFPREVETLR---GLRTTKV 454
Query: 196 TCGSFHTALLTHRKRPNDMLES---------MCWTFGLGENGQLGHGTTQSALVPEQVKE 246
CG +HTA + N++ +S +T+G G+ G+LGHG + LVPE V
Sbjct: 455 ACGVWHTAAAV--EAINELSDSGTSASPSSRKLYTWGDGDKGRLGHGDNEPRLVPECVAA 512
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS----PIL 302
L + + V CG T +++AG V++ G S + G A + P
Sbjct: 513 LIEE-RICQVACGNDLTVALTTAGRVYTMG-----------STAYGQLGSATANGKLPTC 560
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G + F + +VACG+ H ++T ++++WG+G +G LG G P IV
Sbjct: 561 VEGEIANS--FVE--EVACGSYHVAVLTSKN-EVYTWGKGLNGQLGHGDNNHRNTPTIV 614
Score = 42.4 bits (98), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAG 295
AL+P+ + E + + + CG H +V+ G+++SWG E G LG A ++ +
Sbjct: 278 ALLPKAL-ESTVVLDVHGIACGGRHAVLVTRQGEIFSWGEESGGRLGHGVEADVSHPKII 336
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS--GVLGTGKTI 353
D +S + VACG HT VT G L++WG G G+LG G +
Sbjct: 337 DTLSGTNVE-------------LVACGEYHTCAVTLSG-DLYTWGDGTHNYGLLGHGSEV 382
Query: 354 DFFAPAIV 361
+ P V
Sbjct: 383 SHWIPQKV 390
>gi|47219890|emb|CAF97160.1| unnamed protein product [Tetraodon nigroviridis]
Length = 4588
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 123/285 (43%), Gaps = 36/285 (12%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
H+ K+ S K +LAI G ++ WG+ G S +
Sbjct: 420 HRNIKKVFSSKGSDGHTLAITVDGEVFSWGDGEY--GKLGHGNSATQKYPKIVQGPLFSK 477
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
VV + G H A+ + GE Y+WG + G+LG D +SR P +++ +
Sbjct: 478 IVVSASAGYRHSAAVTNDGE--------LYTWGEGDFGRLGHSDSQSRNTPTLVKDIS-- 527
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V +V CGS HT + R W+FG G+NG+LGHG T P+ ++ L
Sbjct: 528 ---GVGQVACGSSHTIAVAQDGR-------TMWSFGGGDNGKLGHGDTNRVYRPKVIEAL 577
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + V G + ++SAG V++WG LG C ++ T ++ P +
Sbjct: 578 HGFI-IRKVCAGSQSSLALTSAGQVFAWGCGSCLG-CGSSETT------SLRPRFV---- 625
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ ++CG +H + ++ + ++++WG G G G T
Sbjct: 626 -EDLSITKIIDISCGDSHCLALSHEN-EVYAWGNNTMGQCGQGHT 668
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 100/205 (48%), Gaps = 27/205 (13%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ PK + + V+ HT +T ++
Sbjct: 394 GKGSYGRLGLGDSNNQSMPKKLVLEPHRNIKKVFSSKGSDGHTLAIT--------VDGEV 445
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE G+LGHG + + P+ V+ +VS G H++ V++ G++++WG
Sbjct: 446 FSWGDGEYGKLGHGNSATQKYPKIVQGPLFSKIVVSASAGYRHSAAVTNDGELYTWGEGD 505
Query: 280 GLGLCPNASLTRNEAGDAISPIL---ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L + S +RN +P L ISG G QVACG++HT+ V DG +
Sbjct: 506 FGRLGHSDSQSRN------TPTLVKDISGVG----------QVACGSSHTIAVAQDGRTM 549
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
WS+G G +G LG G T + P ++
Sbjct: 550 WSFGGGDNGKLGHGDTNRVYRPKVI 574
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 130/294 (44%), Gaps = 72/294 (24%)
Query: 116 FTPSPVWDFHGHTVVKV--ACGSE-HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
F P+ + F G+ V ++ +CGS+ H +AL GE + SWG + G+LG G+
Sbjct: 3752 FVPTIISAFQGYVVTQLVTSCGSDGHSMALTETGEVF--------SWGDGDFGKLGHGNN 3803
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT-----------------HRKRPNDM- 214
E + RPK IE + V ++ CG H+A++T R N M
Sbjct: 3804 ERQRRPKQIEALQGED---VVQLACGFRHSAVVTADGKLFTFGSGESGRLGQRSTSNKMQ 3860
Query: 215 --------------------------LESMC-WTFGLGENGQLGHGTTQSALVPEQVKEL 247
L+ M W FG G+ G+LG G++ + P++V++L
Sbjct: 3861 PERVAALEGYHVGQVSCGLNHTLVLSLDGMAVWAFGDGDYGKLGAGSSTAKYYPQKVEQL 3920
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG + V+++ G V+++G E+ +GL P+ S+ +N + + P L
Sbjct: 3921 CNK-GMKKVCCGAQFSVVLATDGHVYTFGQERLIGL-PD-SMLKNRSNPQVVPSL----- 3972
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +D +A G H + ++ G +++WG G LG G P ++
Sbjct: 3973 -EGLFIED---IAVGCEHVLALSSTG-DIYAWGCNSEGQLGLGHCNLVKEPTLI 4021
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 97/204 (47%), Gaps = 24/204 (11%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-FHTALLTHRKRPNDMLESM 218
G G+LG G+ + P II F Q +CGS H+ LT
Sbjct: 3736 GEGQYGRLGQGNSDDLFVPTIISAF-QGYVVTQLVTSCGSDGHSMALTETGE-------- 3786
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+++G G+ G+LGHG + P+Q++ L Q +V + CG H++VV++ G ++++G
Sbjct: 3787 VFSWGDGDFGKLGHGNNERQRRPKQIEAL-QGEDVVQLACGFRHSAVVTADGKLFTFGSG 3845
Query: 279 KGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
+ + L + + + P ++ G H QV+CG HT++++ DG +W
Sbjct: 3846 E------SGRLGQRSTSNKMQPERVAALEGYHVG------QVSCGLNHTLVLSLDGMAVW 3893
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIV 361
++G G G LG G + + P V
Sbjct: 3894 AFGDGDYGKLGAGSSTAKYYPQKV 3917
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 61/142 (42%), Gaps = 23/142 (16%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDF 124
+K K+C G S+ + G ++ +G LPDS L + P V
Sbjct: 3922 NKGMKKVC---CGAQFSVVLATDGHVYTFGQERLIGLPDSM------LKNRSNPQVVPSL 3972
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G + +A G EHV+AL S G+ Y +WG N+ GQLGLG P +I
Sbjct: 3973 EGLFIEDIAVGCEHVLALSSTGDIY--------AWGCNSEGQLGLGHCNLVKEPTLITAL 4024
Query: 185 NQDSPWAVYEVTCGSFHTALLT 206
+ + +++ G H++ T
Sbjct: 4025 QGKN---IKQISAGRCHSSAWT 4043
>gi|357128620|ref|XP_003565969.1| PREDICTED: uncharacterized protein LOC100827763 [Brachypodium
distachyon]
Length = 1007
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 126/290 (43%), Gaps = 45/290 (15%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG +EG +LV S T P P+ V +++CGS H+
Sbjct: 210 IESLGDVYVWGEVWTDVIPSEGSSNLVCSKTDVLIPKPLESDVVLDVQQISCGSRHIALT 269
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG G+LG G E RPK++E+ + V + CG FHT
Sbjct: 270 TRQGEVF--------TWGEELGGRLGHGTDEDISRPKLVESLAVSN---VEYIACGEFHT 318
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+T D+ W G G LGHG S +P++V + + ++SV CG +H
Sbjct: 319 CAVT---ASGDLYN---WGDGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLSVACGSWH 372
Query: 263 TSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+++ S+G V+++ G LG ++ + +++S ++VA
Sbjct: 373 SALAMSSGKVFTFGDGTFGALGHGNRENVAYPKEVESLSGFRT-------------MKVA 419
Query: 321 CGAAHTVLVTDD---------GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ + + KL++WG G LG G P +V
Sbjct: 420 CGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVV 469
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 48/298 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF----SLVSSFTPSPV-WDFHGHTVVK 131
+ G + A+ +G L+ WG D S G S + P V G V+
Sbjct: 311 IACGEFHTCAVTASGDLYNWG-----DGSYNAGLLGHGIGASHWLPKRVSGPLEGLQVLS 365
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H +S+G+ + ++G G LG G+RE+ PK +E+ S +
Sbjct: 366 VACGSWHSALAMSSGKVF--------TFGDGTFGALGHGNRENVAYPKEVESL---SGFR 414
Query: 192 VYEVTCGSFHTALL--THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+V CG +H+A + T + +M+ +T+G G+ +LGHG ++ LVP V+ L
Sbjct: 415 TMKVACGVWHSAAIVETTSQTGVNMVSRKLFTWGDGDKNRLGHGDKEARLVPTVVQALVD 474
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V CG T ++++G V++ G N N D P +
Sbjct: 475 NNFH-QVACGYSMTIALATSGHVFTMGSS-------NYGQLGNPKADGKQPCQV------ 520
Query: 310 GPKFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CG+ H ++T ++++WG G +G LG G D P IV
Sbjct: 521 ----QDKLSSELVEEISCGSYHVAVLTSRS-EVYTWGMGANGRLGHGGIEDKKKPTIV 573
Score = 41.2 bits (95), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 18/113 (15%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG H ++ + G+V++WG E G LG + ++R P L+ ++
Sbjct: 259 ISCGSRHIALTTRQGEVFTWGEELGGRLGHGTDEDISR--------PKLVESLAVSNVEY 310
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
+ACG HT VT G L++WG G +G+LG G + P V P
Sbjct: 311 -----IACGEFHTCAVTASG-DLYNWGDGSYNAGLLGHGIGASHWLPKRVSGP 357
>gi|224055315|ref|XP_002298476.1| predicted protein [Populus trichocarpa]
gi|222845734|gb|EEE83281.1| predicted protein [Populus trichocarpa]
Length = 1109
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 108/248 (43%), Gaps = 47/248 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG +H + GE + SWG + G+LG G L P++IE + +
Sbjct: 317 VQNIACGGQHAALVTKQGEIF--------SWGEESGGRLGHGVDSDVLHPQLIEALSNTN 368
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G G LGHG S VP++V
Sbjct: 369 ---IEFVACGEYHTCAVT--------LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 417
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ +++ S+ CG +HT+VVSSAG ++++ G LG S++ +++ +
Sbjct: 418 PLEGIHVSSISCGPWHTAVVSSAGQLFTFGDGTFGVLGHGDRKSISLPREVESLKGLRT- 476
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTI 353
VQ ACG HT V + KL++WG G G LG G
Sbjct: 477 ------------VQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 524
Query: 354 DFFAPAIV 361
P V
Sbjct: 525 AKLVPTCV 532
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/310 (26%), Positives = 135/310 (43%), Gaps = 36/310 (11%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P +E S TN I V G + A+ +G L+ WG+ + G + VS +
Sbjct: 358 PQLIEALSNTN------IEFVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHW 410
Query: 117 TPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G V ++CG H + SAG+ +++G G LG GDR+S
Sbjct: 411 VPKRVNGPLEGIHVSSISCGPWHTAVVSSAGQ--------LFTFGDGTFGVLGHGDRKSI 462
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ +E+ + CG +HTA ++ ++ +T+G G+ G+LG
Sbjct: 463 SLPREVESLKG---LRTVQAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 519
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG ++ LVP V L + + V CG T +++G V++ G P
Sbjct: 520 HGDKEAKLVPTCVSALVEPNF-CQVACGHSLTIARTTSGHVYTMG-------SPVYGQLG 571
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
N D P + G ++ACGA H ++T ++++WG+G +G LG G
Sbjct: 572 NPQSDGKLPARVEGKLSR----SSVEEIACGAYHVAVLTSK-TEVYTWGKGANGRLGHGD 626
Query: 352 TIDFFAPAIV 361
T D P++V
Sbjct: 627 TDDKNLPSLV 636
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 78/176 (44%), Gaps = 23/176 (13%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG+ D G + P+ V +VACG +A ++G Y
Sbjct: 505 GKLFTWGDG---DKGRLGHGDKEAKLVPTCVSALVEPNFCQVACGHSLTIARTTSGHVY- 560
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ G+ GQLG + +L ++ ++ S V E+ CG++H A+LT +
Sbjct: 561 -------TMGSPVYGQLGNPQSDGKLPARVEGKLSRSS---VEEIACGAYHVAVLTSK-- 608
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+ +T+G G NG+LGHG T +P V+ L + S+ CG T+ +
Sbjct: 609 ------TEVYTWGKGANGRLGHGDTDDKNLPSLVEALKDK-QVKSIACGTNFTAAI 657
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 15/134 (11%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G +L+P+ + E + + ++ CG H ++V+ G+++SWG E G L
Sbjct: 298 GVKMDSLLPKAL-ESAVVLDVQNIACGGQHAALVTKQGEIFSWGEESG------GRLGHG 350
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTG 350
D + P LI +F VACG HT VT G L++WG G G+LG G
Sbjct: 351 VDSDVLHPQLIEALSNTNIEF-----VACGEYHTCAVTLSG-DLYTWGDGTYNFGLLGHG 404
Query: 351 KTIDFFAPAIVLWP 364
+ + P V P
Sbjct: 405 NEVSHWVPKRVNGP 418
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 11/92 (11%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V ++ACG+ HV L S E Y +WG NG+LG GD + + P ++E
Sbjct: 591 SVEEIACGAYHVAVLTSKTEVY--------TWGKGANGRLGHGDTDDKNLPSLVEALKDK 642
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + K + + +SMC
Sbjct: 643 Q---VKSIACGTNFTAAICLHKWVSGVDQSMC 671
>gi|359477742|ref|XP_002281342.2| PREDICTED: uncharacterized protein LOC100254552 [Vitis vinifera]
Length = 1082
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 133/294 (45%), Gaps = 40/294 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ +G L+ WG+ ++ G + VS + P V G V+ VACG
Sbjct: 324 VACGEYHTCAVSTSGDLFTWGDG-THNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACG 382
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H S G+ +++G G LG GDRES P+ ++ S +V
Sbjct: 383 TWHSALATSNGK--------LFTFGDGTFGVLGHGDRESVPYPREVQIL---SGLKTIKV 431
Query: 196 TCGSFHTALLTH--RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
CG +HTA + + ++ +T+G G+ +LGHG+ ++ L+P V L Y +
Sbjct: 432 ACGVWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCVSALIDYNFH 491
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ CG T ++++G V++ G L N D P L+
Sbjct: 492 -QLACGHTMTVALTTSGHVFTMGGTAYGQLG-------NPLSDGRLPCLV---------- 533
Query: 314 QDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + +++CGA H ++T ++++WGRG +G LG G T D +P V
Sbjct: 534 QDKLVGEFVEEISCGAYHVAVLTSRS-EVFTWGRGANGRLGHGDTEDRRSPTFV 586
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/288 (25%), Positives = 123/288 (42%), Gaps = 41/288 (14%)
Query: 87 IDNAGALWMWGNC----PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
I++ G +++WG LPD S + TP + V ++ACG HV +
Sbjct: 223 IESLGDVYVWGEVWCDGVLPDGSVSPFPIKIDVLTPKSLESNVVLDVHQIACGVRHVALV 282
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
GE + +WG + G+LG G RP ++E ++ V V CG +HT
Sbjct: 283 TRQGEVF--------TWGEESGGRLGHGIDNDFSRPHLVEFLAVNN---VDFVACGEYHT 331
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
++ D+ W G G LGHGT S +P++V + + ++SV CG +H
Sbjct: 332 CAVSTS---GDLF---TWGDGTHNAGLLGHGTEVSHWIPKRVSGPLEGLQVLSVACGTWH 385
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+++ +S G ++++G + G+ + R ++SG ++VACG
Sbjct: 386 SALATSNGKLFTFG-DGTFGVLGHGD--RESVPYPREVQILSG--------LKTIKVACG 434
Query: 323 AAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT + + KL++WG G LG G + P V
Sbjct: 435 VWHTAAIIEVMSQSGTNISSRKLFTWGDGDKHRLGHGSKETYLLPTCV 482
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 71/149 (47%), Gaps = 33/149 (22%)
Query: 122 WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL----R 177
++FH ++ACG VAL ++G + + G GQLG + RL +
Sbjct: 488 YNFH-----QLACGHTMTVALTTSGHVF--------TMGGTAYGQLGNPLSDGRLPCLVQ 534
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
K++ F V E++CG++H A+LT R S +T+G G NG+LGHG T+
Sbjct: 535 DKLVGEF-------VEEISCGAYHVAVLTSR--------SEVFTWGRGANGRLGHGDTED 579
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
P V+ L + S+ CG T+ +
Sbjct: 580 RRSPTFVEALKDR-NVKSISCGSNFTASI 607
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 16/141 (11%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEH 138
G M++A+ +G ++ G + + G L P V D G V +++CG+ H
Sbjct: 496 GHTMTVALTTSGHVFTMGGT----AYGQLGNPLSDGRLPCLVQDKLVGEFVEEISCGAYH 551
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
V L S E + +WG NG+LG GD E R P +E + V ++CG
Sbjct: 552 VAVLTSRSEVF--------TWGRGANGRLGHGDTEDRRSPTFVEALKDRN---VKSISCG 600
Query: 199 SFHTALLTHRKRPNDMLESMC 219
S TA + K + +S+C
Sbjct: 601 SNFTASICIHKWVSGADQSVC 621
Score = 45.1 bits (105), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 51/111 (45%), Gaps = 14/111 (12%)
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
+ CG+ H ++V+ G+V++WG E G L D P L+ + F
Sbjct: 272 IACGVRHVALVTRQGEVFTWGEESG------GRLGHGIDNDFSRPHLVEFLAVNNVDF-- 323
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
VACG HT V+ G L++WG G +G+LG G + + P V P
Sbjct: 324 ---VACGEYHTCAVSTSG-DLFTWGDGTHNAGLLGHGTEVSHWIPKRVSGP 370
>gi|348504160|ref|XP_003439630.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6-like
[Oreochromis niloticus]
Length = 1369
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 88/191 (46%), Gaps = 20/191 (10%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVACGSEHVVAL-VSAGE 147
G L+ WG D + G S SP V +++VA G + AL VS G
Sbjct: 631 GQLYTWGQ----DCRGQLGLGTRKSVCRSPQHVPSLSAIPLIQVAAGGDQSFALSVSGG- 685
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
+SWG N+ GQLGLGD + R P ++ N ++CG HTA+LT
Sbjct: 686 --------VFSWGRNDCGQLGLGDTKDRHTPAPVQCLNMKK---AQHISCGQDHTAILTK 734
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
+TFG G++GQLGH + ++ L P V EL + + CG HT ++
Sbjct: 735 SSGXXXXXXXAVFTFGSGQHGQLGHNSLRNELRPRLVAELWG-AKVTKITCGRNHTLALT 793
Query: 268 SAGDVWSWGME 278
+ V+S+G E
Sbjct: 794 ESKQVYSFGCE 804
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 80/182 (43%), Gaps = 19/182 (10%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+ I + V AGG S A+ +G ++ WG D G TP+PV +
Sbjct: 663 SAIPLIQVAAGGDQSFALSVSGGVFSWGR---NDCGQLGLGDTKDRHTPAPVQCLNMKKA 719
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
++CG +H L + +++G+ +GQLG + LRP+++
Sbjct: 720 QHISCGQDHTAILTKSSGXXXXXXXAVFTFGSGQHGQLGHNSLRNELRPRLVAEL----- 774
Query: 190 WA--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
W V ++TCG HT LT K+ ++FG + GQLGH + VP V+ L
Sbjct: 775 WGAKVTKITCGRNHTLALTESKQ--------VYSFGCEDQGQLGHREESNPSVPLPVR-L 825
Query: 248 PQ 249
PQ
Sbjct: 826 PQ 827
Score = 42.0 bits (97), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 83/202 (41%), Gaps = 30/202 (14%)
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R +R R K ++ + + V+CG ALL+ + +L +T+G GQLG
Sbjct: 594 RRARGRQKFVKHKEK-----IEAVSCGDDVVALLSESGK---VLYGQLYTWGQDCRGQLG 645
Query: 232 HGTTQSA-LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
GT +S P+ V L + L+ V G + +S +G V+SWG C L
Sbjct: 646 LGTRKSVCRSPQHVPSLSA-IPLIQVAAGGDQSFALSVSGGVFSWGRND----CGQLGLG 700
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG-------YKLWSWGRGR 343
+ +P+ + ++CG HT ++T ++++G G+
Sbjct: 701 DTKDRHTPAPV-------QCLNMKKAQHISCGQDHTAILTKSSGXXXXXXXAVFTFGSGQ 753
Query: 344 SGVLGTGKTIDFFAPAIV--LW 363
G LG + P +V LW
Sbjct: 754 HGQLGHNSLRNELRPRLVAELW 775
>gi|222616116|gb|EEE52248.1| hypothetical protein OsJ_34191 [Oryza sativa Japonica Group]
Length = 425
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 129/312 (41%), Gaps = 62/312 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTV 129
K+ V AG S A+ G L+ WG +SS + G + TP V V
Sbjct: 126 KVVEVSAGNHHSCAVTADGKLFAWGR----NSSGQLGLGKRAGKVVSTPRKVDCLADARV 181
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL---------RPKI 180
VA GSEH +A GE SWGA G+LG G + S L P++
Sbjct: 182 KMVALGSEHSIATTEEGEVL--------SWGAAGAGRLGHGHKTSILGFSITTSEYTPRL 233
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
I+ + + + G H+A + + F G+ + G G + L
Sbjct: 234 IKNLDGVK---IKRIAAGMLHSACIDEKGT----------LFIFGQKTEKGFGRSGDELR 280
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P V+E+P + V CG +HT VV+ +GD++SWG + N L SP
Sbjct: 281 PTVVEEVP---FSEEVACGGYHTCVVTDSGDLYSWGSNE------NGCLGLGGTDMVRSP 331
Query: 301 ILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWG--------RGRS--GVLGT 349
++ + F+ PV +V+CG HT +++ W WG G S G LG
Sbjct: 332 EVLKSS-----LFKFPVSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGH 386
Query: 350 GKTIDFFAPAIV 361
G +D+F P +V
Sbjct: 387 GNDVDYFEPMMV 398
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 95/230 (41%), Gaps = 34/230 (14%)
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY-----EVT 196
++S+GE G V WG + G+LG+G ESR P F P +
Sbjct: 20 MLSSGEPAAGRRRVAALWGNGDYGRLGMGALESRWSPTACPFFLTGRPGDDDDDPPASLA 79
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVS 255
CG HT LT R + GL + GQLG G++ + +L P +V + V V
Sbjct: 80 CGGAHTLFLTESGR--------VFAAGLNDFGQLGIGSSVTHSLEPIEVSGFDEKV--VE 129
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V G H+ V++ G +++WG GLG ++ D ++ +
Sbjct: 130 VSAGNHHSCAVTADGKLFAWGRNSSGQLGLGKRAGKVVSTPRKVDCLADARVK------- 182
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA G+ H++ T++G L SWG +G LG G +I
Sbjct: 183 ------MVALGSEHSIATTEEGEVL-SWGAAGAGRLGHGHKTSILGFSIT 225
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 86/199 (43%), Gaps = 23/199 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVV 130
+KI + AG + S ID G L+++G TE GF P+ V +
Sbjct: 240 VKIKRIAAGMLHSACIDEKGTLFIFGQ------KTEKGFGRSGDELRPTVVEEVP--FSE 291
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + +G+ YSWG+N NG LGLG + P+++++ P
Sbjct: 292 EVACGGYHTCVVTDSGD--------LYSWGSNENGCLGLGGTDMVRSPEVLKSSLFKFP- 342
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTF---GLGENGQLGHGTTQSALVPEQVKEL 247
V +V+CG HTA+++ TF G GQLGHG P V E
Sbjct: 343 -VSKVSCGWKHTAVISGGDIYTWGWGGANGTFFEEGHSSGGQLGHGNDVDYFEPMMV-EF 400
Query: 248 PQYVYLVSVDCGLFHTSVV 266
+ V V CG HT +
Sbjct: 401 GKNARAVHVSCGFNHTGAI 419
>gi|413942403|gb|AFW75052.1| putative regulator of chromosome condensation (RCC1) family
protein, partial [Zea mays]
Length = 688
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 124/292 (42%), Gaps = 46/292 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG S G +++SS P P+ V V CG +H
Sbjct: 32 DSLGDVYVWGEVVCDTSVRTGSDTVISSTGRIDILLPKPLESNLVLDVYHVDCGVKHAAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
++ GE + +WG ++ G+LG G RE +RP+++E+ + V V CG FH
Sbjct: 92 VMKNGEVF--------TWGEDSGGRLGHGTREDCVRPRLVESLTVSN---VDFVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHG +P+++ + + + V CG +
Sbjct: 141 TCAVTTTG------ELYTWGDGTYNVGLLGHGNDVGHWIPKRISGALEGLQVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + L + + G K + VAC
Sbjct: 195 HTALITSMGQLFTFG-DGSFGVLGHGDLKSVSYPREVESL-------SGLK---TIAVAC 243
Query: 322 GAAHT-----VLVTDDGY-------KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 244 GVWHTAAIVEVIVTRSSSSVKLSAGKLFTWGDGDKHRLGHGDKETRLKPTCV 295
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 23/178 (12%)
Query: 89 NAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
+AG L+ WG+ D G + P+ V H +VACG VAL ++G+
Sbjct: 266 SAGKLFTWGD---GDKHRLGHGDKETRLKPTCVATLIDHDFYRVACGHSLTVALTTSGQV 322
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
S G GQLG + R+ P ++E ++ V ++ CGS+H A+LT+R
Sbjct: 323 L--------SMGNAVYGQLGNPHSDGRI-PCLVE--DKIVGEQVLQIACGSYHVAVLTNR 371
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NG+LGHG T+ VP V+ L + + CG T+ +
Sbjct: 372 --------SEVFTWGKGANGRLGHGDTEDRKVPTLVEALKDRA-VRYIACGANFTAAI 420
>gi|242055697|ref|XP_002456994.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
gi|241928969|gb|EES02114.1| hypothetical protein SORBIDRAFT_03g046900 [Sorghum bicolor]
Length = 870
Score = 82.4 bits (202), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 138/313 (44%), Gaps = 39/313 (12%)
Query: 59 SLEDDSKTNHKAPIKICSV---KAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
S ED + IC+V G + A+ AG L+ WG+ + G + VS
Sbjct: 113 SREDSVHPRLVESLAICNVDIVACGEFHTCAVTTAGELYTWGD-GTHNIGLLGNGTDVSH 171
Query: 116 FTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
+ P + GH V V+CG+ H + S G+ +++G G LG G+RES
Sbjct: 172 WIPKRISGALEGHQVAYVSCGTWHTALVTSRGQ--------LFTFGDGTFGVLGHGNRES 223
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH---RKRPNDMLESMCWTFGLGENGQLG 231
P+ +E+ S V CG +HTA + + + M +T+G G+ +LG
Sbjct: 224 FSCPREVESL---SGLKTIAVACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLG 280
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASL 289
HG + L P V L Y + + CG T ++++G + S G + LG
Sbjct: 281 HGDKEPRLKPTCVASLIDYDF-CRIACGHSLTVGLTTSGQILSMGNTVYGQLG------- 332
Query: 290 TRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
N D P L+ G H VQVACG+ H ++T+ ++++WG+G +G LG
Sbjct: 333 --NPRSDGKLPCLVEDIMGEH------VVQVACGSYHVAVLTNKS-EVFTWGKGANGRLG 383
Query: 349 TGKTIDFFAPAIV 361
G D P +V
Sbjct: 384 HGDIEDRKIPTLV 396
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 123/292 (42%), Gaps = 48/292 (16%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D++G +++WG ++ G +++ S P P+ V V CG +H
Sbjct: 32 DSSGDVYVWGEVICDNTVRVGPDTVIRSTGKADFLLPKPLESKLVLDVYHVDCGVKHAAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ GE + +WG + G+LG G RE + P+++E+ + V V CG FH
Sbjct: 92 VTKNGEVF--------TWGEESGGRLGHGSREDSVHPRLVESL---AICNVDIVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LG+GT S +P+++ + + V CG +
Sbjct: 141 TCAVT------TAGELYTWGDGTHNIGLLGNGTDVSHWIPKRISGALEGHQVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
HT++V+S G ++++ G LG S + +++S + + V
Sbjct: 195 HTALVTSRGQLFTFGDGTFGVLGHGNRESFSCPREVESLSGL-------------KTIAV 241
Query: 320 ACGAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG HT V+VT KL++WG G LG G P V
Sbjct: 242 ACGVWHTAAVVEVIVTQSSSSMSSGKLFTWGDGDKHRLGHGDKEPRLKPTCV 293
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 64/148 (43%), Gaps = 21/148 (14%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
C + G +++ + +G + GN L + ++G P V D G VV+
Sbjct: 302 CRIACGHSLTVGLTTSGQILSMGNTVYGQLGNPRSDGKL-------PCLVEDIMGEHVVQ 354
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS HV L + E ++WG NG+LG GD E R P ++E
Sbjct: 355 VACGSYHVAVLTNKSEV--------FTWGKGANGRLGHGDIEDRKIPTLVEALRDR---G 403
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CGS T+ + K + +S C
Sbjct: 404 VRHIACGSNFTSAICQHKWVSGAEQSQC 431
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG+ D G P+ V + ++ACG V L ++G+
Sbjct: 266 GKLFTWGD---GDKHRLGHGDKEPRLKPTCVASLIDYDFCRIACGHSLTVGLTTSGQIL- 321
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
S G GQLG + +L P ++E + V +V CGS+H A+LT++
Sbjct: 322 -------SMGNTVYGQLGNPRSDGKL-PCLVEDIMGEH---VVQVACGSYHVAVLTNK-- 368
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NG+LGHG + +P V+ L + + CG TS +
Sbjct: 369 ------SEVFTWGKGANGRLGHGDIEDRKIPTLVEALRDR-GVRHIACGSNFTSAI 417
>gi|7406983|gb|AAF61856.1|AF189221_1 HERC2 [Drosophila melanogaster]
Length = 743
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 38/248 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V +G +V +ACGS H A+ ++G +WG G+LG GD E +LR
Sbjct: 10 PKLVEHLNGMSVADIACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLR 61
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
PK++E + ++ CGS L N W++G G+ G+LG G +
Sbjct: 62 PKLVEALLG---YRAIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDG 112
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNE 293
+P +++ L + +V V+CG + ++ +G V++WG KG LG + R +
Sbjct: 113 CKLPYKIESLAG-LGVVKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPK 169
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
A+ G K + +A G+ H V +D G ++++WG G LG G
Sbjct: 170 KVAAL----------QGKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVT 215
Query: 354 DFFAPAIV 361
P +V
Sbjct: 216 AIQWPRLV 223
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 71/162 (43%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 108 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGK---GDFHRLGHGSVDH 164
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y+WG N+ GQLG G +
Sbjct: 165 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEV--------YTWGDNDEGQLGDGTVTA 216
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
P+++ + +VTCGS H T+ L+ R RP
Sbjct: 217 IQWPRLVTALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 255
Score = 47.0 bits (110), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 58/121 (47%), Gaps = 15/121 (12%)
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
HG S P+ V+ L + + + CG H++ ++++G V +WG + L
Sbjct: 1 HGNRMSYDRPKLVEHL-NGMSVADIACGSAHSAAITASGHVLTWGKGR------YGRLGH 53
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGYKLWSWGRGRSGVLGT 349
++ D + P L+ + + +ACG+ A T+ +TDD +WSWG G G LG
Sbjct: 54 GDSEDQLRPKLVEALLGY-----RAIDIACGSGDAQTLCITDDD-NVWSWGDGDYGKLGR 107
Query: 350 G 350
G
Sbjct: 108 G 108
>gi|5823976|emb|CAB54002.1| RPGR protein [Homo sapiens]
gi|119579848|gb|EAW59444.1| retinitis pigmentosa GTPase regulator, isoform CRA_d [Homo sapiens]
Length = 646
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 37/235 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V V ACG H + G Y + G NN GQLGLGD E R
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGNVY--------ATGGNNEGQLGLGDTEERNT 129
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+I F S + +++ GS +A LT R + +G GQ+G +
Sbjct: 130 FHVISFFT--SEHKIKQLSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSN 179
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
VP+QV + + V +S CG +H++ V++ G+++ +G E G LGL PN L G
Sbjct: 180 VCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----G 230
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P L+S + +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 231 NHRTPQLVS------EIPEKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 106/221 (47%), Gaps = 40/221 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + AG S A+ G L+MWG+ +S + G VS+ P G V +
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVC-VPQQVTIGKPVSWI 195
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPW 190
+CG H + + GE Y +G NG+LGL ++ + P+++ + P
Sbjct: 196 SCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLV----SEIPE 243
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVKE 246
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E +++
Sbjct: 244 KVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD 294
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 295 --QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|78190492|ref|NP_001030025.1| X-linked retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 37/235 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V V ACG H + G Y+ G NN GQLGLGD E R
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNT 129
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+I F S + +++ GS +A LT R + +G GQ+G +
Sbjct: 130 FHVISFFT--SEHKIKQLSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSN 179
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
VP+QV + + V +S CG +H++ V++ G+++ +G E G LGL PN L G
Sbjct: 180 VCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----G 230
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P L+S + +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 231 NHRTPQLVS------EIPEKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 52/291 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDFFAPAI 360
+ Q ++CG HT L+TD G ++++G GR G LG G + F P +
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLGLENFTNHFIPTL 342
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 40/221 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + AG S A+ G L+MWG+ +S + G VS+ P G V +
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVC-VPQQVTIGKPVSWI 195
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPW 190
+CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 196 SCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----PE 243
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVKE 246
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E +++
Sbjct: 244 KVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD 294
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 295 --QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|77403863|tpg|DAA05713.1| TPA_exp: RPGR ORF15 isoform [Homo sapiens]
Length = 1152
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 113/235 (48%), Gaps = 37/235 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V V ACG H + G Y+ G NN GQLGLGD E R
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNT 129
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+I F S + +++ GS +A LT R + +G GQ+G +
Sbjct: 130 FHVISFFT--SEHKIKQLSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSN 179
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
VP+QV + + V +S CG +H++ V++ G+++ +G E G LGL PN L G
Sbjct: 180 VCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----G 230
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +P L+S + +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 231 NHRTPQLVS------EIPEKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 52/291 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDFFAPAI 360
+ Q ++CG HT L+TD G ++++G GR G LG G + F P +
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLGLENFTNHFIPTL 342
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 40/221 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + AG S A+ G L+MWG+ +S + G VS+ P G V +
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVC-VPQQVTIGKPVSWI 195
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPW 190
+CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 196 SCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----PE 243
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVKE 246
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E +++
Sbjct: 244 KVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD 294
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 295 --QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|444917133|ref|ZP_21237237.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711259|gb|ELW52206.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 1081
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 138/325 (42%), Gaps = 54/325 (16%)
Query: 27 LNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLA 86
L DG + GSNS E T +P L P I +V AG + SLA
Sbjct: 765 LAVSSDGSVFSFGSNSRGQLGYEGSATQTSPRWL--------TGPECIEAVAAGALFSLA 816
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
+ G +W WG+ + S + G V++ T H VV +A GS+H +A+ +
Sbjct: 817 LSCDGGVWAWGD----NGSGQLGDGAVTARTAPARVPGLAH-VVAIAAGSDHALAVRA-- 869
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
D ++WGAN +GQLG G SR P ++ V V GS H+ L
Sbjct: 870 ------DGTVWAWGANGSGQLGDGTTTSRAVPMQVKELVD-----VVAVAGGSGHS--LA 916
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
R + W +G +GQLG GTT S +P V L + S G H+ +
Sbjct: 917 VRA------DGTVWAWGANGSGQLGDGTTTSRTLPVFVSTLSGVQAIAS---GAQHSLAL 967
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPKFQDPVQVACGAAH 325
+ G VW+WG L + +R P+ +SG +G G + GA+
Sbjct: 968 AEGGVVWAWGANGSGQLGDGTTTSRTR------PVQVSGLSGVQG--------LVAGASF 1013
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTG 350
++ +T K+WSWG +G LG G
Sbjct: 1014 SLALTPG--KVWSWGNNSAGQLGDG 1036
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 84/286 (29%), Positives = 118/286 (41%), Gaps = 52/286 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T AP ++ ++ AG +LA+ G +W WG S G +
Sbjct: 834 LGDGAVTARTAPARVPGLAHVVAIAAGSDHALAVRADGTVWAWGAN---GSGQLGDGTTT 890
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V + VV VA GS H +A+ + D ++WGAN +GQLG G
Sbjct: 891 SRAVPMQVKELV--DVVAVAGGSGHSLAVRA--------DGTVWAWGANGSGQLGDGTTT 940
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
SR P + T + V + G+ H+ L + W +G +GQLG G
Sbjct: 941 SRTLPVFVSTLS-----GVQAIASGAQHSLALAE--------GGVVWAWGANGSGQLGDG 987
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
TT S P QV L LV+ S+ + G VWSWG N
Sbjct: 988 TTTSRTRPVQVSGLSGVQGLVAGAS----FSLALTPGKVWSWG--------------NNS 1029
Query: 294 AGDAISPILISGNGP-HGPKFQDPVQVACGAAHTVLV-TDDGYKLW 337
AG L S + P GP V ++ GA HTV++ +DD + W
Sbjct: 1030 AGQLGDGTLNSRSQPGAGPTLSSFVALSAGAQHTVVLRSDDSFLSW 1075
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 85/331 (25%), Positives = 127/331 (38%), Gaps = 77/331 (23%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ +G + A+ G +W WG+ L +S +P PV V +
Sbjct: 703 RVQGFASGLRTTFALRADGTVWAWGDNSLGQLGNG-----ATSASPVPVQAVGYPRTVPL 757
Query: 133 ACGSEHVVALVSAGETY------KGE---------------------------------- 152
A G++HV+A+ S G + +G+
Sbjct: 758 ASGAQHVLAVSSDGSVFSFGSNSRGQLGYEGSATQTSPRWLTGPECIEAVAAGALFSLAL 817
Query: 153 --DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
D ++WG N +GQLG G +R P + V + GS H L R
Sbjct: 818 SCDGGVWAWGDNGSGQLGDGAVTARTAPARVPGLAH-----VVAIAAGSDHA--LAVRA- 869
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ W +G +GQLG GTT S VP QVKEL V +V+V G H+ V + G
Sbjct: 870 -----DGTVWAWGANGSGQLGDGTTTSRAVPMQVKEL---VDVVAVAGGSGHSLAVRADG 921
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
VW+WG L + +R P+ +S +A GA H++ +
Sbjct: 922 TVWAWGANGSGQLGDGTTTSRTL------PVFVS-------TLSGVQAIASGAQHSLALA 968
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ G +W+WG SG LG G T P V
Sbjct: 969 EGGV-VWAWGANGSGQLGDGTTTSRTRPVQV 998
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 122/294 (41%), Gaps = 48/294 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ AG SL + AG +W WG G S + TP+ V G V VA G+
Sbjct: 53 LAAGLNHSLYVTPAGTVWAWGANA---QGQLGEGSTLQHSTPTQVVGLTG--VTAVAAGN 107
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H +AL E+ ++WG N +GQLG G + R P + V +
Sbjct: 108 THSMALR--------EEGTVWTWGTNTDGQLGDGVSQ-RSVPAQVAGLT-----GVTAIA 153
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G+ H+ L + W +G GQLG G++ S P +V L + +V++
Sbjct: 154 AGNLHSLAL---------INGAVWAWGNNTTGQLGDGSSTSRSTPAKVAGLTE---VVAI 201
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
G FH+ + G VW+WG L +R+ +P+ +SG
Sbjct: 202 AAGDFHSLALKRDGTVWAWGGNYSGQLGDGTLDSRS------TPVRVSG-------LTGI 248
Query: 317 VQVACGAAHTVLVTDD--GYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
V +A G +H+V + G K+W+WG G LG G + P V P LT+
Sbjct: 249 VALAGGGSHSVAASSTTLGGKVWAWGDNTYGQLGNGGDVSSLLPLEV--PGLTQ 300
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 118/295 (40%), Gaps = 56/295 (18%)
Query: 56 APDSLEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG- 108
A L + S H P ++ +V AG S+A+ G +W WG ++T+G
Sbjct: 76 AQGQLGEGSTLQHSTPTQVVGLTGVTAVAAGNTHSMALREEGTVWTWG------TNTDGQ 129
Query: 109 -GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G + P+ V G V +A G+ H +AL++ ++WG N GQL
Sbjct: 130 LGDGVSQRSVPAQVAGLTG--VTAIAAGNLHSLALING---------AVWAWGNNTTGQL 178
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G SR P + + V + G FH+ L KR + W +G +
Sbjct: 179 GDGSSTSRSTPAKVAGLTE-----VVAIAAGDFHSLAL---KR-----DGTVWAWGGNYS 225
Query: 228 GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
GQLG GT S P +V L V L S + G VW+WG + G N
Sbjct: 226 GQLGDGTLDSRSTPVRVSGLTGIVALAGGGSHSVAASSTTLGGKVWAWG-DNTYGQLGN- 283
Query: 288 SLTRNEAGDAIS--PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
GD S P+ + P V +A G +H++ + D +W+WG
Sbjct: 284 ------GGDVSSLLPLEV-------PGLTQVVALASGTSHSLALRGD-DSVWAWG 324
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 90/312 (28%), Positives = 132/312 (42%), Gaps = 56/312 (17%)
Query: 60 LEDDSKTNHKAPIKIC-------SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGG 109
L D S T+ P ++ ++ AG S+A+ G++W WG N L D +T
Sbjct: 583 LGDGSTTSRNVPGRVSGLPAGIQAIVAGPSYSVALGADGSVWTWGENSNGQLGDGTT--- 639
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+ P P T+V ++ H VAL + G + ++WG N +GQLG
Sbjct: 640 -----TARPVPARVSLPATLVALSTRGSHTVALDTTG--------MLWAWGRNVSGQLGN 686
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G S P+ + +F + F + L T D W +G GQ
Sbjct: 687 GTLVSESTPRRVPSFAR----------VQGFASGLRTTFALRAD---GTVWAWGDNSLGQ 733
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG+G T ++ VP Q P+ V L S G H VSS G V+S+G L S
Sbjct: 734 LGNGATSASPVPVQAVGYPRTVPLAS---GAQHVLAVSSDGSVFSFGSNSRGQLGYEGSA 790
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
T+ SP ++ GP+ + VA GA ++ ++ DG +W+WG SG LG
Sbjct: 791 TQT------SPRWLT-----GPECIE--AVAAGALFSLALSCDG-GVWAWGDNGSGQLGD 836
Query: 350 GKTIDFFAPAIV 361
G APA V
Sbjct: 837 GAVTARTAPARV 848
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 85/312 (27%), Positives = 130/312 (41%), Gaps = 48/312 (15%)
Query: 60 LEDDSKTNHKAPIKICSVKAGGMMSLAIDNA------GALWMWGNCPLPDSSTEGGFSLV 113
L + S + P ++ S+ AG ++ + G++W WG+ G +LV
Sbjct: 381 LGNGSSSVRALPGRVPSLTAGASLAAGDHHVFLRQADGSVWAWGDNTY---GQLGDGTLV 437
Query: 114 SSFTPSPVWDFHGHTVVK-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S P+PV T V+ ++ S H +AL S D ++WG N GQLG D
Sbjct: 438 SR--PAPVRLSSTLTSVRALSASSYHSLALRS--------DGTVWAWGDNAYGQLG--DT 485
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
RP + E+ G++H+ L + WT+G GQLG
Sbjct: 486 SGGRRPSPAQVPGVA---GATEIAAGTYHSLALRS--------DGTVWTWGDNSYGQLGA 534
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G T P +P + V GLFH+ + S+G VW+WG L ++ +RN
Sbjct: 535 GATPRG--PRAPAVVPGLAVITHVAAGLFHSLALDSSGQVWAWGDNVYGQLGDGSTTSRN 592
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P +SG P G + + G +++V + DG +W+WG +G LG G T
Sbjct: 593 V------PGRVSGL-PAGIQ-----AIVAGPSYSVALGADG-SVWTWGENSNGQLGDGTT 639
Query: 353 IDFFAPAIVLWP 364
PA V P
Sbjct: 640 TARPVPARVSLP 651
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/290 (26%), Positives = 115/290 (39%), Gaps = 43/290 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ ++ +G SLA+ ++W WG+ ++ G +S PV +
Sbjct: 300 QVVALASGTSHSLALRGDDSVWAWGDNAQAQTAQTG-----TSVQRVPVRVSGVSDAQAL 354
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
ACG + +LV G D V WGAN +GQLG G R P + + A
Sbjct: 355 ACG--NAFSLVGRG------DNVTLGWGANGSGQLGNGSSSVRALPGRVPSLT-----AG 401
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G H L + W +G GQLG GT S P ++ V
Sbjct: 402 ASLAAGDHHVFL--------RQADGSVWAWGDNTYGQLGDGTLVSRPAPVRLSSTLTSVR 453
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+S +H+ + S G VW+WG + G + S R SP + P
Sbjct: 454 ALSASS--YHSLALRSDGTVWAWG-DNAYGQLGDTSGGRRP-----SPAQV-------PG 498
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF-FAPAIV 361
++A G H++ + DG +W+WG G LG G T APA+V
Sbjct: 499 VAGATEIAAGTYHSLALRSDG-TVWTWGDNSYGQLGAGATPRGPRAPAVV 547
>gi|408500851|ref|YP_006864770.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
gi|408465675|gb|AFU71204.1| RCC1 repeat-containing protein [Bifidobacterium asteroides PRL2011]
Length = 1070
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 147/350 (42%), Gaps = 55/350 (15%)
Query: 33 GQLGF-SGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG + +NS VP + P + D +K +K V AG SLA+D+ G
Sbjct: 646 GQLGNNTKTNSSVPVRVRD------PANPTDPNKG-----LKAIQVSAGDEHSLALDSNG 694
Query: 92 ALWMWG---NCPLPDSSTEGGFSLVSSFTP-SPVWDFHGHTVVKVACGSEHVVALVSAGE 147
++ WG N L ++ST V P SP G V+V+ G H +A+
Sbjct: 695 YVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWHHSLAV----- 749
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF----NQDSPWAVYEVTCGSFHTA 203
G D Y+WG NN GQLG + S P + F + + +V+ G H+
Sbjct: 750 ---GSDGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAVQVSAGYSHSL 806
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV------KELPQYVYLVSVD 257
+ + + +GL GQLG+ T + VP +V K+ + + +++
Sbjct: 807 AVGS--------DGYTYAWGLNNYGQLGNSNTVDSTVPVRVRDPTSPKDASKGLKATAIN 858
Query: 258 CGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
G H+ V + G ++WG + G G N+S+ D SP S K
Sbjct: 859 AGGEHSLAVGNNGYAYAWGWNLYRQLGDGTTSNSSVPV-PVRDPTSPADAS-------KG 910
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
+ + G H++ V +GY ++WG G LG G T D P VL+
Sbjct: 911 LQATRFSVGDHHSLAVGSNGYA-YAWGENSYGQLGDGTTDDSNVPVSVLF 959
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 84/317 (26%), Positives = 137/317 (43%), Gaps = 44/317 (13%)
Query: 82 MMSLAIDNAGALWMWGNCP---LPDSSTEGGFS--LVSSFTPSPVWDFHGHTVVKVACGS 136
+ SLA+ + G + WG+ L D++T + +V T P DF T V+V+ G
Sbjct: 570 VFSLAVGSDGKAYAWGDNTYGQLGDATTNSRSTPNIVRKPTGVPT-DF---TYVQVSAGK 625
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSP---WAV 192
H +AL G D Y+WG+N +GQLG + + P ++ + N P
Sbjct: 626 WHSLAL--------GSDGYVYAWGSNQHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKA 677
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP---- 248
+V+ G H+ L + +G +NG+LG+ +T + VP +V++
Sbjct: 678 IQVSAGDEHSLALDS--------NGYVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTD 729
Query: 249 --QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + V V G H+ V S G ++WG+ G N+S + + +
Sbjct: 730 PSKGLKAVQVSAGWHHSLAVGSDGYTYAWGLNN-YGQLGNSSKNSSSFPVRVRDFASPND 788
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
G K VQV+ G +H++ V DGY ++WG G LG T+D P V P
Sbjct: 789 ANKGLKA---VQVSAGYSHSLAVGSDGY-TYAWGLNNYGQLGNSNTVDSTVPVRVRDPTS 844
Query: 367 TEE----FKQDELNTGG 379
++ K +N GG
Sbjct: 845 PKDASKGLKATAINAGG 861
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/355 (23%), Positives = 141/355 (39%), Gaps = 66/355 (18%)
Query: 33 GQLGFSGSNSL-VPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG + +NS P ++ + P + D V AG SLA+ + G
Sbjct: 590 GQLGDATTNSRSTPNIVRK------PTGVPTD--------FTYVQVSAGKWHSLALGSDG 635
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-------FHGHTVVKVACGSEHVVALVS 144
++ WG+ G + +S P V D G ++V+ G EH +AL S
Sbjct: 636 YVYAWGSN---QHGQLGNNTKTNSSVPVRVRDPANPTDPNKGLKAIQVSAGDEHSLALDS 692
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSP---WAVYEVTCGSF 200
G Y+WG N+NG+LG +S + ++ + + P +V+ G
Sbjct: 693 NG--------YVYAWGWNDNGRLGNNSTTDSSVPVRVRDPASPTDPSKGLKAVQVSAGWH 744
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP------QYVYLV 254
H+ + + + +GL GQLG+ + S+ P +V++ + + V
Sbjct: 745 HSLAVGS--------DGYTYAWGLNNYGQLGNSSKNSSSFPVRVRDFASPNDANKGLKAV 796
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
V G H+ V S G ++WG+ G N++ D+ P+ + P PK
Sbjct: 797 QVSAGYSHSLAVGSDGYTYAWGLNN-YGQLGNSNTV-----DSTVPVRV--RDPTSPKDA 848
Query: 315 D----PVQVACGAAHTVLVTDDGYKL-WSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+ G H++ V ++GY W W R LG G T + P V P
Sbjct: 849 SKGLKATAINAGGEHSLAVGNNGYAYAWGWNLYRQ--LGDGTTSNSSVPVPVRDP 901
>gi|409911788|ref|YP_006890253.1| lipoprotein [Geobacter sulfurreducens KN400]
gi|298505363|gb|ADI84086.1| ATS1 domain repeat protein [Geobacter sulfurreducens KN400]
Length = 2082
Score = 82.4 bits (202), Expect = 5e-13, Method: Composition-based stats.
Identities = 82/293 (27%), Positives = 118/293 (40%), Gaps = 30/293 (10%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V+ GG SL + + G LW WG S G + S P PV G+ A G+
Sbjct: 403 VEPGGAFSLGLRSNGTLWAWGGNA---SGQLGDGTTTPSAIPVPVVGDAGNWRT-TATGT 458
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP---WAVY 193
H VA+ + G ++WG N++GQLG+G + P+ I N S WA
Sbjct: 459 AHSVAVRADG--------TLWAWGDNSSGQLGIGSTVAASTPQQITVTNPASAGNDWAA- 509
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVY 252
V G HT L + W +G GQLG GT T + P Q+ +
Sbjct: 510 -VAAGEAHTIGLK--------ADGTLWAWGDNTFGQLGDGTGTSNRTTPVQIVTGNPGNF 560
Query: 253 ---LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V+V G + + + G +W+WG L L + ++ + L + P
Sbjct: 561 DRNWVAVAAGGVFSLALQADGTIWTWGDNSLLQLGTDPAVLAPATQRNVPAQLAVASPPS 620
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
V +A G H + + DG LW+WG G LG G T F P V+
Sbjct: 621 TAFNSSWVAIAAGQDHGLALQADG-TLWAWGANSVGQLGNGVTTATFTPVQVI 672
Score = 70.9 bits (172), Expect = 2e-09, Method: Composition-based stats.
Identities = 94/386 (24%), Positives = 138/386 (35%), Gaps = 91/386 (23%)
Query: 56 APDSLEDDSKTNHKAPIKIC-------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG 108
A L D + T P+ + + G S+A+ G LW WG+ +SS +
Sbjct: 426 ASGQLGDGTTTPSAIPVPVVGDAGNWRTTATGTAHSVAVRADGTLWAWGD----NSSGQL 481
Query: 109 GF-SLVSSFTPSPVWDFH----GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANN 163
G S V++ TP + + G+ VA G H + L + G ++WG N
Sbjct: 482 GIGSTVAASTPQQITVTNPASAGNDWAAVAAGEAHTIGLKADG--------TLWAWGDNT 533
Query: 164 NGQLGLGDRES-RLRPKIIETFNQ---DSPWAVYEVTCGSFHTAL--------------- 204
GQLG G S R P I T N D W V G F AL
Sbjct: 534 FGQLGDGTGTSNRTTPVQIVTGNPGNFDRNW-VAVAAGGVFSLALQADGTIWTWGDNSLL 592
Query: 205 -----------LTHRKRPNDML----------------------------ESMCWTFGLG 225
T R P + + W +G
Sbjct: 593 QLGTDPAVLAPATQRNVPAQLAVASPPSTAFNSSWVAIAAGQDHGLALQADGTLWAWGAN 652
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGL 281
GQLG+G T + P QV Y VS+ G H+ S G +W+WG + G
Sbjct: 653 SVGQLGNGVTTATFTPVQVINAEGVPY-VSLAAGTSHSLAGRSDGTLWAWGNNTSGQLGT 711
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G P + N + +++ N D + G +H+ + +G LW+WG+
Sbjct: 712 GPHPGDADPLNPQPHTVPARILTSNPVSAA--DDWLVATAGGSHSAALKSNG-TLWTWGQ 768
Query: 342 GRSGVLGTGKTIDFFAPAIVLWPPLT 367
SG LG G T + P +L P ++
Sbjct: 769 NTSGQLGNGTTTEADIPTALLEPRIS 794
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 91/350 (26%), Positives = 142/350 (40%), Gaps = 73/350 (20%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKIC----SVKAGGMMSLAI 87
DG L +GSN QF +G D + N +P+++ +V AG SL I
Sbjct: 50 DGTLWAAGSN--------QFGQLG------DGTGINRTSPVQVPGTWKTVAAGTTHSLGI 95
Query: 88 DNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
G+LW WG+ L G + + F+P +++ G++ V VS
Sbjct: 96 KADGSLWAWGSNLFGQLGQPLVNGQLA-TNKFSP-----------IRIGTGNDWVA--VS 141
Query: 145 AGET----YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
AGE KG D +SWG N G+LG G SR +P + + S V G
Sbjct: 142 AGELTSFGLKG-DGTLWSWGNNLFGELGDGTTVSRPQPVQV-VADPLSNGRYVAVAAGGE 199
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCG 259
H L + W + G N GT + ++P ++ ++ G
Sbjct: 200 HALAL--------QADGTLWAW--GANLTGQLGTGGTGILPNPTPLKIGTDRDWTAISAG 249
Query: 260 LFHTSVVSSAGDVWSWGM----EKGLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQ 314
H+ + + G +WSWG E G G+ P A++T +P + G G
Sbjct: 250 EMHSVALKADGSLWSWGQNLFGELGNGVALPGANVT--------TPTRV-GTG------S 294
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
D V +A GA HTV + +G + +WG G +G G + P +++ P
Sbjct: 295 DWVAIAAGALHTVALHRNG-TVSAWGNNAQGAVGDGTVANRSTPTLIVAP 343
Score = 57.4 bits (137), Expect = 2e-05, Method: Composition-based stats.
Identities = 90/352 (25%), Positives = 133/352 (37%), Gaps = 66/352 (18%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKI------CSVKA 79
SL DG L GSN F +G P + TN +PI+I +V A
Sbjct: 92 SLGIKADGSLWAWGSN--------LFGQLGQP-LVNGQLATNKFSPIRIGTGNDWVAVSA 142
Query: 80 GGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVW----DFHGHTVVKV 132
G + S + G LW WGN L D +T VS P PV V V
Sbjct: 143 GELTSFGLKGDGTLWSWGNNLFGELGDGTT------VSR--PQPVQVVADPLSNGRYVAV 194
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G EH +AL + G ++WGAN GQLG G P ++ D W
Sbjct: 195 AAGGEHALALQADG--------TLWAWGANLTGQLGTGGTGILPNPTPLK-IGTDRDWTA 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT---QSALVPEQVKELPQ 249
++ G H+ L + W++G G+LG+G + P +V
Sbjct: 246 --ISAGEMHSVALK--------ADGSLWSWGQNLFGELGNGVALPGANVTTPTRVGTGSD 295
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V++ G HT + G V +WG + R+ ++P+ + N
Sbjct: 296 W---VAIAAGALHTVALHRNGTVSAWGNNAQGAVGDGTVANRSTPTLIVAPVTLVNN--- 349
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V +A G + V +G ++ WG +G LG G AP ++
Sbjct: 350 -------VAIAAGTGVSFSVLANG-TVFGWGGNGAGQLGNGTFGAVTAPTVL 393
Score = 51.6 bits (122), Expect = 9e-04, Method: Composition-based stats.
Identities = 54/177 (30%), Positives = 73/177 (41%), Gaps = 22/177 (12%)
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
AV V G H +LT R + W G + GQLG GT + P QV +
Sbjct: 33 AVPHVAAGGNH--VLTLRS------DGTLWAAGSNQFGQLGDGTGINRTSPVQVPGTWK- 83
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+V G H+ + + G +W+WG G + A + SPI I G G
Sbjct: 84 ----TVAAGTTHSLGIKADGSLWAWG-SNLFGQLGQPLVNGQLATNKFSPIRI-GTG--- 134
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
D V V+ G + + DG LWSWG G LG G T+ P V+ PL+
Sbjct: 135 ---NDWVAVSAGELTSFGLKGDG-TLWSWGNNLFGELGDGTTVSRPQPVQVVADPLS 187
>gi|115767093|ref|XP_787316.2| PREDICTED: RCC1 domain-containing protein 1-like
[Strongylocentrotus purpuratus]
Length = 371
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 33/195 (16%)
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
I F+Q P V E+ CG H LLT + + +++G+G GQLGHG
Sbjct: 162 IFSPFSQ--PIGVQEIACGKEHALLLT--------AQGLVYSYGMGSRGQLGHGDIGKED 211
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD--VWSWGMEKGLGLCPNASLTRNEAG-- 295
VP+ + + V +V++ G +H++ +S+ GD +W W LGL P+ +R E G
Sbjct: 212 VPKLLDAIA-CVPMVTISAGGWHSACISAIGDMYIWGWNESGQLGLPPDLESSRTEEGSS 270
Query: 296 ----DAISPILISG--NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
D IS ++ + P G +V+CG+ HT V+ D +L++WG G+ G LG
Sbjct: 271 HVMADRISFQMVPAVLDLPGGVNVS---KVSCGSRHTAAVSYD-KRLYTWGWGKYGQLGH 326
Query: 350 G--------KTIDFF 356
G K +DFF
Sbjct: 327 GDVQSRDSPKLVDFF 341
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/152 (36%), Positives = 75/152 (49%), Gaps = 24/152 (15%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWG-------NCP--LPDSSTEGGFSLVS----SF 116
A + + ++ AGG S I G +++WG P L S TE G S V SF
Sbjct: 220 ACVPMVTISAGGWHSACISAIGDMYIWGWNESGQLGLPPDLESSRTEEGSSHVMADRISF 279
Query: 117 TPSP-VWDFHGH-TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V D G V KV+CGS H A+ +Y D Y+WG GQLG GD +S
Sbjct: 280 QMVPAVLDLPGGVNVSKVSCGSRHTAAV-----SY---DKRLYTWGWGKYGQLGHGDVQS 331
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
R PK+++ F Q+ V +VTCG + +A+ T
Sbjct: 332 RDSPKLVDFFLQNR-LDVLDVTCGDWSSAVYT 362
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 77/169 (45%), Gaps = 38/169 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++ACG EH + L + G + YS+G + GQLG GD PK+++ +
Sbjct: 172 VQEIACGKEHALLLTAQG--------LVYSYGMGSRGQLGHGDIGKEDVPKLLDAI---A 220
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-----------HGTTQS 237
+ ++ G +H+A ++ DM + +G E+GQLG G++
Sbjct: 221 CVPMVTISAGGWHSACIS---AIGDM-----YIWGWNESGQLGLPPDLESSRTEEGSSHV 272
Query: 238 -------ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+VP V +LP V + V CG HT+ VS +++WG K
Sbjct: 273 MADRISFQMVP-AVLDLPGGVNVSKVSCGSRHTAAVSYDKRLYTWGWGK 320
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 73/158 (46%), Gaps = 42/158 (26%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL-----------------GD 171
+V ++ G H + + G+ Y WG N +GQLGL D
Sbjct: 224 MVTISAGGWHSACISAIGDMYI--------WGWNESGQLGLPPDLESSRTEEGSSHVMAD 275
Query: 172 RES-RLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
R S ++ P ++ D P V +V+CGS HTA +++ KR +T+G G+ G
Sbjct: 276 RISFQMVPAVL-----DLPGGVNVSKVSCGSRHTAAVSYDKR--------LYTWGWGKYG 322
Query: 229 QLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSV 265
QLGHG QS P+ V L + ++ V CG + ++V
Sbjct: 323 QLGHGDVQSRDSPKLVDFFLQNRLDVLDVTCGDWSSAV 360
>gi|449499989|ref|XP_004174916.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
ligase HERC3-like [Taeniopygia guttata]
Length = 1050
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTV 129
I V G S+A+ + G L+ WG + ++G L + P + + T+
Sbjct: 86 IVHVACGESHSVALSDQGQLFSWG------AGSDGQLGLTTIEDAVTVPRLIKKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G +GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGKNSSGQLGLSDERDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RSQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 79/253 (31%), Positives = 115/253 (45%), Gaps = 48/253 (18%)
Query: 118 PSP-VWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P V+ F H V +VACG H V L+ GE Y + G N GQLG D E
Sbjct: 23 PEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HDCEGS 73
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
+I Q + V CG H+ L+ + + +++G G +GQLG T
Sbjct: 74 KPEQIGALAGQH----IVHVACGESHSVALSDQGQ--------LFSWGAGSDGQLGLTTI 121
Query: 236 QSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGL-CPN-AS 288
+ A+ VP +K+L Q L V CG +H +++ G ++WG + GLG CP+ AS
Sbjct: 122 EDAVTVPRLIKKLNQQTIL-QVSCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R ++ D I P+ QVA G AH+ ++ G ++ WG+ SG LG
Sbjct: 181 PQRVKSLDGI-PL---------------AQVAAGGAHSFALSLSG-AVFGWGKNSSGQLG 223
Query: 349 TGKTIDFFAPAIV 361
D +P V
Sbjct: 224 LSDERDRESPCHV 236
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG +SS + G S +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWGK----NSSGQLGLSDERDRESPCHVKLLRSQKVV 245
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSP 189
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 246 YISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE-- 295
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ M + FG G GQLG G T + P VK
Sbjct: 296 --VSQIACGRHHTLAFV----PSS---GMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>gi|198462494|ref|XP_002135307.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
gi|198150848|gb|EDY73934.1| GA28417 [Drosophila pseudoobscura pseudoobscura]
Length = 1052
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 130/301 (43%), Gaps = 50/301 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN--CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + G S+A+ G + WG+ C ST+ + P + TVV+
Sbjct: 88 VIQIACGSRHSMALTEWGQILSWGDNDCGQVGHSTDNDVIEL----PKILRFLVSRTVVQ 143
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG------LGDRESRLRPKIIETFN 185
+ACG+ H +AL S GE YSWG+N GQLG L + LR I
Sbjct: 144 IACGNNHSLALTSCGE--------LYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTILGI- 194
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQ 243
P A + CG H+ L++ FG G+N GQLG Q+ P Q
Sbjct: 195 ---PLAT--IACGGNHSFLISKSSA----------VFGWGKNTCGQLGLNDEQNRAYPSQ 239
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
+K + + + + V CG ++ +++ G V++ G L AS + I ++I
Sbjct: 240 LKSM-RTLGVRFVTCGDEYSVFLTNEGGVFTCGAGNYGQLGHGAS-----NNEMIPRMVI 293
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
G QVACG HT+ + G +++S+G G SG LGT TI P +V+
Sbjct: 294 ELMG------STITQVACGNRHTLALVPSGGRVYSFGLGASGQLGTRNTISQTLPKVVIG 347
Query: 364 P 364
P
Sbjct: 348 P 348
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 27/204 (13%)
Query: 154 LVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ Y WG ++GQLGLG + E L P IE F DSP V ++ CG HT LT +
Sbjct: 1 MALYCWGDASHGQLGLGGIENEQILLPSQIE-FKPDSP--VQQIACGHRHTLFLTANGQ- 56
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ G ++ QLGH +P + EL YV ++ + CG H+ ++ G
Sbjct: 57 -------VYACGNNDHHQLGHELPTKRPLP--IPELQAYV-VIQIACGSRHSMALTEWGQ 106
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+ SWG + G +++ I L+S + VQ+ACG H++ +T
Sbjct: 107 ILSWG-DNDCGQVGHSTDNDVIELPKILRFLVS---------RTVVQIACGNNHSLALTS 156
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDF 355
G +L+SWG G LG D
Sbjct: 157 CG-ELYSWGSNIYGQLGVQSPKDL 179
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 103/259 (39%), Gaps = 35/259 (13%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
AL+ WG+ GG PS + V ++ACG H + L + G+ Y
Sbjct: 2 ALYCWGDASHGQLGL-GGIENEQILLPSQIEFKPDSPVQQIACGHRHTLFLTANGQVY-- 58
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
NN LG RP I + V ++ CGS H+ LT
Sbjct: 59 --------ACGNNDHHQLGHELPTKRPLPIPEL---QAYVVIQIACGSRHSMALT----- 102
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + + W G + GQ+GH T + ++ +V + CG H+ ++S G+
Sbjct: 103 -EWGQILSW--GDNDCGQVGHSTDNDVIELPKILRFLVSRTVVQIACGNNHSLALTSCGE 159
Query: 272 VWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
++SWG + LG+ L + A ++ IL G +ACG H+ L+
Sbjct: 160 LYSWGSNIYGQLGVQSPKDLPHSNAPLRLTTIL-------GIPL---ATIACGGNHSFLI 209
Query: 330 TDDGYKLWSWGRGRSGVLG 348
+ ++ WG+ G LG
Sbjct: 210 SKSS-AVFGWGKNTCGQLG 227
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 31/178 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHT 128
I + ++ GG S I + A++ WG +T G L + PS +
Sbjct: 194 IPLATIACGGNHSFLISKSSAVFGWG------KNTCGQLGLNDEQNRAYPSQLKSMRTLG 247
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQD 187
V V CG E+ V L + G ++ GA N GQLG G + + P+ +IE
Sbjct: 248 VRFVTCGDEYSVFLTNEGGV--------FTCGAGNYGQLGHGASNNEMIPRMVIELMGS- 298
Query: 188 SPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ +V CG+ HT AL+ R ++FGLG +GQLG T S +P+ V
Sbjct: 299 ---TITQVACGNRHTLALVPSGGR--------VYSFGLGASGQLGTRNTISQTLPKVV 345
>gi|291401444|ref|XP_002717009.1| PREDICTED: hect domain and RLD 3-like [Oryctolagus cuniculus]
Length = 974
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 83/176 (47%), Gaps = 25/176 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVK 131
I + G SLA+ G L+ WG +S + G ++ P+P V G +V+
Sbjct: 130 IIQITCGDYHSLALSKGGELFAWGQ----NSHGQLGIGVMCPSVPTPQIVEHLAGVPLVQ 185
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++ G H + L +G Y SWG N+ GQLGLG E++ P +IE +
Sbjct: 186 ISAGEAHSMTLSMSGNVY--------SWGKNDLGQLGLGHTENKDSPCLIEALDNQK--- 234
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V CG HTALLT + +TFG G+ GQLGH + ++ L P V L
Sbjct: 235 VEFVACGGSHTALLTQ--------DGQLFTFGAGKYGQLGHKSKRNELKPRLVTVL 282
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 43/230 (18%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G+EHV+ L S G+ ++ Y++ + +S L+ K I
Sbjct: 93 MAQGAEHVLVLSSDGKPFE------YNYSIEH------AKFQSILQEKTI---------- 130
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++TCG +H+ L+ E W G +GQLG G ++ Q+ E V
Sbjct: 131 -IQITCGDYHSLALSKGG------ELFAW--GQNSHGQLGIGVMCPSVPTPQIVEHLAGV 181
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
LV + G H+ +S +G+V+SWG + LG L E D SP LI
Sbjct: 182 PLVQISAGEAHSMTLSMSGNVYSWG-KNDLG---QLGLGHTENKD--SPCLIEALDNQKV 235
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+F VACG +HT L+T DG +L+++G G+ G LG + P +V
Sbjct: 236 EF-----VACGGSHTALLTQDG-QLFTFGAGKYGQLGHKSKRNELKPRLV 279
>gi|426258035|ref|XP_004022625.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Ovis
aries]
Length = 1137
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 123/269 (45%), Gaps = 46/269 (17%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WG L +T + + + P V F VACG H + L G+
Sbjct: 90 WGQLGLGSKATVNKPTCIKALKPEKVK-F-------VACGRNHTLVLTGGGK-------- 133
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G NN GQLGLGD + R +I F S + +++ GS +A LT
Sbjct: 134 VYATGGNNEGQLGLGDTDERSAFHLISFFT--SQHKIKQLSAGSNTSAALTE-------- 183
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ + +G GQ+G + VP QV + + + +S CG +H++ V++ G+++++
Sbjct: 184 DGELFMWGDNSEGQIGLQNITNMCVPHQVT-VGKPISWIS--CGYYHSAFVTTEGELYTF 240
Query: 276 GM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G E G LGL P + P L+ G + +QVACG HTV++T+
Sbjct: 241 GEPESGKLGLPPKLLVNHK------VPQLVPGIS------EKVIQVACGGGHTVVLTEKA 288
Query: 334 YKLWSWGRGRSGVLGTGK-TIDFFAPAIV 361
++++G G+ G LG G T + P ++
Sbjct: 289 --VYTFGLGQFGQLGLGTFTFETSEPKVI 315
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 80/294 (27%), Positives = 124/294 (42%), Gaps = 63/294 (21%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
P K+ V G +L + G ++ G L D+ F L+S FT
Sbjct: 112 PEKVKFVACGRNHTLVLTGGGKVYATGGNNEGQLGLGDTDERSAFHLISFFTSQ------ 165
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
H + +++ GS AL GE + WG N+ GQ+GL + + P + T
Sbjct: 166 -HKIKQLSAGSNTSAALTEDGE--------LFMWGDNSEGQIGLQNITNMCVPHQV-TVG 215
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ W ++CG +H+A +T E +TFG E+G+LG LV +V
Sbjct: 216 KPISW----ISCGYYHSAFVT--------TEGELYTFGEPESGKLG--LPPKLLVNHKV- 260
Query: 246 ELPQYV-----YLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGD 296
PQ V ++ V CG HT V++ V+++G+ + GLG +
Sbjct: 261 --PQLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTF---------TFE 308
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P +I K + V CG HT L+T+ G L+++G GR G LG G
Sbjct: 309 TSEPKVI-----ESVKDKKISHVCCGENHTALITESGL-LYTFGDGRHGKLGLG 356
>gi|115476524|ref|NP_001061858.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|38175475|dbj|BAD01172.1| putative UVB-resistance protein UVR8 [Oryza sativa Japonica Group]
gi|113623827|dbj|BAF23772.1| Os08g0430700 [Oryza sativa Japonica Group]
gi|215734996|dbj|BAG95718.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222640598|gb|EEE68730.1| hypothetical protein OsJ_27407 [Oryza sativa Japonica Group]
Length = 395
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 96/358 (26%), Positives = 148/358 (41%), Gaps = 64/358 (17%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK---TNHKAPIKICSVKAGG 81
SL C DG+L G N Q T+G P + +S + A + I GG
Sbjct: 55 NSLAICADGRLFTWGWN--------QRGTLGHPPETKTESSPAPVDALAGVSIVQAAIGG 106
Query: 82 MMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
LA+D+ G + WG C E G + P P V +VA G
Sbjct: 107 WHCLAVDDKGRAYAWGGNEYGQCGEEAERKEDGTRALRRDIPIPQGCAPKLKVRQVAAGG 166
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H V L +D ++WG GD + P ++ V +
Sbjct: 167 THSVVLT--------QDGHVWTWGQ----PWPPGDIKQISTPVRVQGLEN-----VKVIA 209
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G+FH LT + + W +G E GQLG G TQ P +V+ L + LV +
Sbjct: 210 VGAFHNLALTE--------DGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSD-LSLVDI 260
Query: 257 DCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
G +H++ ++ G+V++WG + G G ++ + + L++G
Sbjct: 261 AAGGWHSTALTKEGEVYAWGRGEHGRLGFGDDKSSHMVPQKV------ELLAG------- 307
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP---AIVLWPPLT 367
+D +QV+CG H+V +T DG +++S+GRG G LG G+ + P I L PP T
Sbjct: 308 -EDIIQVSCGGTHSVALTRDG-RMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGT 363
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/263 (29%), Positives = 122/263 (46%), Gaps = 35/263 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K+ V AGG S+ + G +W WG P P G +S TP V V
Sbjct: 157 LKVRQVAAGGTHSVVLTQDGHVWTWGQ-PWP----PGDIKQIS--TPVRVQGLE--NVKV 207
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G+ H +AL ED + ++WG N GQLG GD + R +P +E + S
Sbjct: 208 IAVGAFHNLALT--------EDGILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLS--- 256
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA-LVPEQVKELPQY 250
+ ++ G +H+ LT E + +G GE+G+LG G +S+ +VP++V EL
Sbjct: 257 LVDIAAGGWHSTALTK--------EGEVYAWGRGEHGRLGFGDDKSSHMVPQKV-ELLAG 307
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN---EAGDAISPILISGNG 307
++ V CG H+ ++ G ++S+G L +T E + P SG G
Sbjct: 308 EDIIQVSCGGTHSVALTRDGRMFSYGRGDHGRLGYGRKVTTGHPMEVPIDLPPPGTSG-G 366
Query: 308 PHGPKFQDPVQVACGAAHTVLVT 330
G ++Q VACG HT+ +
Sbjct: 367 DSGGQWQ-ARYVACGGRHTLAIA 388
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 27/190 (14%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLG+G E + + + AV V GS ++ + R
Sbjct: 15 AWGSGEDGQLGMGGYEEEDWARGVAALDA---LAVSAVVAGSRNSLAICADGR------- 64
Query: 218 MCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ P V L V +V G +H V G ++WG
Sbjct: 65 -LFTWGWNQRGTLGHPPETKTESSPAPVDAL-AGVSIVQAAIGGWHCLAVDDKGRAYAWG 122
Query: 277 MEKGLGLCPNASLTRNEAGDAIS---PILISGNGPHG--PKFQDPVQVACGAAHTVLVTD 331
+ G C + + + A+ PI P G PK + QVA G H+V++T
Sbjct: 123 GNE-YGQCGEEAERKEDGTRALRRDIPI------PQGCAPKLK-VRQVAAGGTHSVVLTQ 174
Query: 332 DGYKLWSWGR 341
DG+ +W+WG+
Sbjct: 175 DGH-VWTWGQ 183
>gi|402874534|ref|XP_003901090.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Papio
anubis]
Length = 3314
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 2547 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 2603
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 2604 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 2652
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 2653 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 2704
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 2705 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GMIIED---VAVGA 2753
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 2754 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 2790
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 2692 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGMI 2745
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 2746 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 2797
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 2798 ---VRQISAGRCHSAAWT 2812
>gi|357131779|ref|XP_003567511.1| PREDICTED: uncharacterized protein LOC100833487 [Brachypodium
distachyon]
Length = 913
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 121/298 (40%), Gaps = 60/298 (20%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D++G +++WG +S G +++ S P P+ V V CG +H
Sbjct: 47 DSSGDVYVWGEVICENSVRAGSDAVIRSTVRHDVLLPKPLESKLVLDVYHVDCGVKHAAL 106
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ GE + +WG + G+LG G RE + P ++E+ + V V CG FH
Sbjct: 107 VTKNGEVF--------TWGEESGGRLGHGSREDYIHPSLVESLAVSN---VDFVACGEFH 155
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHGT S +P+++ + + V CG +
Sbjct: 156 TCAVT------TAGELYTWGDGTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCGTW 209
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD------ 315
HT++++S G ++++ GD +L GN P ++
Sbjct: 210 HTALITSTGQLFTF-------------------GDGTFGVLGHGNRESIPCPREVESLSG 250
Query: 316 --PVQVACGAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ VACG HT V+VT KL++WG G LG G P V
Sbjct: 251 LKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCV 308
Score = 78.6 bits (192), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 129/289 (44%), Gaps = 30/289 (10%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ AG L+ WG+ + G + +S + P + G V V+CG
Sbjct: 149 VACGEFHTCAVTTAGELYTWGD-GTHNIGLLGHGTDLSHWIPKRISGALEGQQVAYVSCG 207
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H + S G+ +++G G LG G+RES P+ +E+ S V
Sbjct: 208 TWHTALITSTGQ--------LFTFGDGTFGVLGHGNRESIPCPREVESL---SGLKTIAV 256
Query: 196 TCGSFHTALLTH---RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
CG +HTA + + + + +T+G G+ +LGHG + + P V L Y +
Sbjct: 257 ACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRVKPTCVASLIDYDF 316
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ CG T ++++G VW G+G L N D P L+
Sbjct: 317 H-RIACGHSLTVGLTTSGQVW------GMGNTVYGQLG-NPRSDGKLPCLVED-----IM 363
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ VQVACG+ H ++T ++++WG+G +G LG G D P +V
Sbjct: 364 GENVVQVACGSYHVAVLTVKS-EVFTWGKGANGRLGHGDIEDRKIPTLV 411
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 21/146 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ G +++ + +G +W GN L + ++G P V D G VV+VA
Sbjct: 319 IACGHSLTVGLTTSGQVWGMGNTVYGQLGNPRSDGKL-------PCLVEDIMGENVVQVA 371
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CGS HV L E ++WG NG+LG GD E R P ++E V
Sbjct: 372 CGSYHVAVLTVKSEV--------FTWGKGANGRLGHGDIEDRKIPTLVEVLRDR---GVR 420
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMC 219
+ CG+ TA + RK + +S C
Sbjct: 421 HIACGANFTAAICQRKWMSGAEQSQC 446
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 89/215 (41%), Gaps = 27/215 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV---CYSWGANNNGQLGLGDRES 174
P V G + VACG H A+V T + ++WG + +LG GD+E
Sbjct: 242 PREVESLSGLKTIAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEP 301
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R++P + + + + + CG T LT W G GQLG+
Sbjct: 302 RVKPTCVASLID---YDFHRIACGHSLTVGLT--------TSGQVWGMGNTVYGQLGNPR 350
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ L P V+++ +V V CG +H +V++ +V++WG KG N L +
Sbjct: 351 SDGKL-PCLVEDI-MGENVVQVACGSYHVAVLTVKSEVFTWG--KG----ANGRLGHGDI 402
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
D P L+ G + +ACGA T +
Sbjct: 403 EDRKIPTLVEVLRDRGVR-----HIACGANFTAAI 432
>gi|326436402|gb|EGD81972.1| hypothetical protein PTSG_02656 [Salpingoeca sp. ATCC 50818]
Length = 5125
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 125/302 (41%), Gaps = 56/302 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVVK 131
K+ V GG +L + L + G + G L + S + G V++
Sbjct: 3147 KVVDVAYGGYHTLVVTEDHRLLVCG------TGKNGKLGLRDTRDQSSLVPVPGLRDVLR 3200
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG H A+ + G+ Y WG N++G+LGLGD+ R P ++
Sbjct: 3201 VACGRRHSAAVTATGQ--------LYMWGCNHHGRLGLGDQNDRYEPTLVPNLP-----P 3247
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ-- 249
V V CG HT +LT R ++FG G+ G+LG +PE +L +
Sbjct: 3248 VQMVACGDRHTLVLTQR--------GGVYSFGCGDQGRLG--------IPEAPHKLLRPA 3291
Query: 250 -----YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ V CG ++ ++ G ++ WG + L S+T + + PI ++
Sbjct: 3292 KLDFGRARMTRVICGCNSSAALTDTGQLYVWGTGRSYRLG-TGSMTSH-----MLPIRVT 3345
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
H V + G H V V++ G ++ WG S LG G T D AP +L P
Sbjct: 3346 DLASH-----KIVDASLGHEHGVAVSETG-DVFVWGSNDSSQLG-GATADAAAPRPLLHP 3398
Query: 365 PL 366
L
Sbjct: 3399 EL 3400
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/243 (28%), Positives = 115/243 (47%), Gaps = 36/243 (14%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V+VA +HV+AL + GE YSWG+N+ QLG D + + KI F + S
Sbjct: 134 VQVAA-IDHVLALTTRGE--------VYSWGSNSYAQLGRND-DPIVPTKITRGFGRSS- 182
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP- 248
+ V G H+A ++ + + +T+G G G+LGHGT+ P+ V L
Sbjct: 183 --IVYVAVGGQHSAAVSE--------DGVLYTWGRGSYGRLGHGTSDDVAFPQPVLALKS 232
Query: 249 QYVYLVSVDCGL--FHTSVVSSAGDVWSWG-MEKGLGLCPNASLTRNEAGDAIS-----P 300
+ + + +V CG+ HT +S G ++++G + G G P + G + P
Sbjct: 233 KDILIATVACGIGDAHTLALSRDGVIYAFGDGDYGWGPAPATGGASGKLGLGSTERTRVP 292
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF-APA 359
+ I + G K + QV CG + +T+ G L++WG G LG G++ +PA
Sbjct: 293 VAIPCDF-DGTKVK---QVWCGRQISACLTEGG-ALYTWGNASGGALGNGESYGAVESPA 347
Query: 360 IVL 362
+L
Sbjct: 348 RIL 350
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 67/146 (45%), Gaps = 19/146 (13%)
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ W+ G + LGH LV E ++V + ++D H +++ G+V+SWG
Sbjct: 102 TFLWSCGPPTSRLLGHEGHTLKLVSGLENE--RFVQVAAID----HVLALTTRGEVYSWG 155
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
A L RN+ D I P I+ G V VA G H+ V++DG L
Sbjct: 156 SNS------YAQLGRND--DPIVPTKIT----RGFGRSSIVYVAVGGQHSAAVSEDGV-L 202
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIVL 362
++WGRG G LG G + D P VL
Sbjct: 203 YTWGRGSYGRLGHGTSDDVAFPQPVL 228
>gi|442319025|ref|YP_007359046.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
gi|441486667|gb|AGC43362.1| RCC1 repeat-containing protein [Myxococcus stipitatus DSM 14675]
Length = 746
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 126/290 (43%), Gaps = 54/290 (18%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S T PI++ +V AG SLA+ + G LW WG S + G +
Sbjct: 480 LGDGSTTASLIPIQVPGLTGVAAVAAGDGFSLALKSDGTLWAWGRN---SSGSLGDGTTT 536
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP+ V +F G V A G++HV+AL + G ++WG N+ GQLG G
Sbjct: 537 GRTTPALVPNFTGVKAVATAPGADHVLALKTNG--------TLWAWGGNSYGQLGDGSVL 588
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+L P + V + GS H+ ++ WT+G + QLG G
Sbjct: 589 RKLSPVFVNLT------GVLSIATGSDHSLVV--------RTGGAVWTWGRNDAAQLGDG 634
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T + +P QV+ + L + D H+ ++ S G +W+WG S + E
Sbjct: 635 TGTTRTLPVQVQGVTGATALAAGD---RHSLMLRSDGTLWAWG-----------SNSEGE 680
Query: 294 AGDAI---SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
GD P+ + P G V ++ GA H++ +T DG +W+WG
Sbjct: 681 LGDGTMTGRPLPVRVRAPAG-----VVALSAGARHSLAMTPDG-TVWAWG 724
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/319 (29%), Positives = 131/319 (41%), Gaps = 61/319 (19%)
Query: 63 DSKTNHKAP-------IKICSVKAG-GMMSLAIDNAGALWMWGN---CPLPDSSTEGGFS 111
D NH++ + +V+AG G S+A G+LW+WG L D +T
Sbjct: 80 DGTHNHRSTPAQVPNLTSVTAVEAGRGNYSMARRADGSLWVWGYNTYGQLGDGTT----- 134
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
S ++P PV F G V V+ G H +AL S D ++WG N +GQLG G
Sbjct: 135 -TSRWSPIPVPGFSG--VSSVSGGYMHSMALKS--------DGTVWAWGRNADGQLGDGS 183
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
RL P + V V+ G +A L + WT+G +G+LG
Sbjct: 184 TTQRLSPVRALGLS-----LVTSVSAGYDFSAAL--------KADGTVWTWGDNTDGELG 230
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASL 289
+GT L P QV L V+L+ G H V S G VW WG LGL A +
Sbjct: 231 NGTLTDRLTPAQVPGLTGVVFLM---AGHSHVMAVKSDGTVWVWGRNDWGVLGLGEGAPI 287
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ ++P + P V G +TV + DG LW WG G LG
Sbjct: 288 RQ------LTPTQV-------PGISQVAFVDSGEHYTVALKTDG-TLWGWGYNNYGQLGE 333
Query: 350 GKTIDFFAPAIVLWPPLTE 368
G + P + P LT+
Sbjct: 334 GTGGVKYLPTQL--PGLTQ 350
Score = 75.9 bits (185), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 128/313 (40%), Gaps = 54/313 (17%)
Query: 56 APDSLEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTE-G 108
A L D S T +P++ + SV AG S A+ G +W WG+ ++ E G
Sbjct: 175 ADGQLGDGSTTQRLSPVRALGLSLVTSVSAGYDFSAALKADGTVWTWGD----NTDGELG 230
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+L TP+ V G VV + G HV+A+ S D + WG N+ G LG
Sbjct: 231 NGTLTDRLTPAQVPGLTG--VVFLMAGHSHVMAVKS--------DGTVWVWGRNDWGVLG 280
Query: 169 LGDRE--SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG+ +L P + +Q V V G +T L + W +G
Sbjct: 281 LGEGAPIRQLTPTQVPGISQ-----VAFVDSGEHYTVAL--------KTDGTLWGWGYNN 327
Query: 227 NGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
GQLG GT +P Q LP + ++ G +H + G W+WG+
Sbjct: 328 YGQLGEGTGGVKYLPTQ---LPGLTQVATLGVGRYHAMAIKQDGTAWAWGLHD---AYQY 381
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
A++TR ++ A++ +F ++ G T+++ DG +W GR SG
Sbjct: 382 ANVTRPDSAVAVA-----------TQFTGALRPVGGLYETLVLKADG-TVWGAGRNGSGQ 429
Query: 347 LGTGKTIDFFAPA 359
LG G PA
Sbjct: 430 LGDGSGTQRVVPA 442
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 87/313 (27%), Positives = 118/313 (37%), Gaps = 52/313 (16%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S T P + SV +G +LA + G +W WG S G S
Sbjct: 430 LGDGSGTQRVVPAQAVGLTGAVSVASGANHALAAKSDGTVWAWGGN---GSGQLGDGSTT 486
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+S P V G V VA G +AL S D ++WG N++G LG G
Sbjct: 487 ASLIPIQVPGLTG--VAAVAAGDGFSLALKS--------DGTLWAWGRNSSGSLGDGTTT 536
Query: 174 SRLRPKIIETFNQDSPWAVYEVTC--GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R P ++ F V V G+ H L + N L W +G GQLG
Sbjct: 537 GRTTPALVPNFT-----GVKAVATAPGADHVLAL----KTNGTL----WAWGGNSYGQLG 583
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
G+ L P V ++S+ G H+ VV + G VW+WG L TR
Sbjct: 584 DGSVLRKLSPVFVN----LTGVLSIATGSDHSLVVRTGGAVWTWGRNDAAQLGDGTGTTR 639
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P+ + G +A G H++++ DG LW+WG G LG G
Sbjct: 640 TL------PVQVQG-------VTGATALAAGDRHSLMLRSDG-TLWAWGSNSEGELGDGT 685
Query: 352 TIDFFAPAIVLWP 364
P V P
Sbjct: 686 MTGRPLPVRVRAP 698
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/215 (28%), Positives = 85/215 (39%), Gaps = 31/215 (14%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D +SWG N G+LG G R P + + E G++ A +R +
Sbjct: 64 DGTVWSWGTNYGGELGDGTHNHRSTPAQVPNLTSVT---AVEAGRGNYSMA-----RRAD 115
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
L W +G GQLG GTT S P V P + + SV G H+ + S G V
Sbjct: 116 GSL----WVWGYNTYGQLGDGTTTSRWSPIPV---PGFSGVSSVSGGYMHSMALKSDGTV 168
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+WG L ++ R +SP+ G V+ G + + D
Sbjct: 169 WAWGRNADGQLGDGSTTQR------LSPVRALG-------LSLVTSVSAGYDFSAALKAD 215
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
G +W+WG G LG G D PA V P LT
Sbjct: 216 G-TVWTWGDNTDGELGNGTLTDRLTPAQV--PGLT 247
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 78/305 (25%), Positives = 113/305 (37%), Gaps = 74/305 (24%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWG--------NCPLPDSSTEGGFSLVSSFTPSPVWDF 124
++ ++ G ++AI G W WG N PDS+
Sbjct: 350 QVATLGVGRYHAMAIKQDGTAWAWGLHDAYQYANVTRPDSA------------------- 390
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYS----WGA--NNNGQLGLGDRESRLRP 178
VA ++ AL G Y E LV + WGA N +GQLG G R+ P
Sbjct: 391 -------VAVATQFTGALRPVGGLY--ETLVLKADGTVWGAGRNGSGQLGDGSGTQRVVP 441
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
V G+ H AL + W +G +GQLG G+T ++
Sbjct: 442 AQAVGLT-----GAVSVASGANH-ALAAKS-------DGTVWAWGGNGSGQLGDGSTTAS 488
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
L+P QV P + +V G + + S G +W+WG + SL
Sbjct: 489 LIPIQV---PGLTGVAAVAAGDGFSLALKSDGTLWAWGRNS------SGSLGDGTTTGRT 539
Query: 299 SPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+P L+ P F V A GA H + + +G LW+WG G LG G +
Sbjct: 540 TPALV-------PNFTGVKAVATAPGADHVLALKTNG-TLWAWGGNSYGQLGDGSVLRKL 591
Query: 357 APAIV 361
+P V
Sbjct: 592 SPVFV 596
>gi|356501403|ref|XP_003519514.1| PREDICTED: uncharacterized protein LOC100806439 [Glycine max]
Length = 1109
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 86/314 (27%), Positives = 138/314 (43%), Gaps = 43/314 (13%)
Query: 57 PDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF 116
P +E S TN I V G + A+ +G L+ WGN + G + VS +
Sbjct: 353 PKLIEALSNTN------IELVACGEYHTCAVTLSGDLYTWGNGTY-NCGLLGHGNQVSHW 405
Query: 117 TPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G V ++CG H + SAG+ +++G G LG GDR+S
Sbjct: 406 VPKRVNGPLEGIHVSYISCGPWHTAVVTSAGQ--------LFTFGDGTFGALGHGDRKSV 457
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ +E+ CG +HTA ++ ++ +T+G G+ G+LG
Sbjct: 458 SLPREVESLKG---LRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLG 514
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASL 289
HG ++ LVP +V + V CG T +++ G V++ G + LG+ P A
Sbjct: 515 HGDKEAKLVPTRVALVNVKPNFCQVACGHSLTVALTTKGHVYTMGSPVYGQLGI-PQA-- 571
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
D PI + K + ++ACGA H ++T ++++WG+G +G L
Sbjct: 572 ------DGKLPICVEW------KLSESFVEEIACGAYHVAVLTSR-TEVYTWGKGANGRL 618
Query: 348 GTGKTIDFFAPAIV 361
G G T D P +V
Sbjct: 619 GHGDTDDRNTPTLV 632
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 108/259 (41%), Gaps = 47/259 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG H + GE + SWG G+LG G L PK+IE + +
Sbjct: 312 VQNIACGGRHAALVTKQGEIF--------SWGEEAGGRLGHGVDSDVLHPKLIEALSNTN 363
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G G LGHG S VP++V
Sbjct: 364 ---IELVACGEYHTCAVT--------LSGDLYTWGNGTYNCGLLGHGNQVSHWVPKRVNG 412
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ +++ + CG +HT+VV+SAG ++++ G LG S++ +++ +
Sbjct: 413 PLEGIHVSYISCGPWHTAVVTSAGQLFTFGDGTFGALGHGDRKSVSLPREVESLKGLRT- 471
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTI 353
V+ ACG HT V + KL++WG G G LG G
Sbjct: 472 ------------VRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKE 519
Query: 354 DFFAPAIVLWPPLTEEFKQ 372
P V + F Q
Sbjct: 520 AKLVPTRVALVNVKPNFCQ 538
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 67/141 (47%), Gaps = 30/141 (21%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-----KIIETFN 185
+VACG VAL + G Y + G+ GQLG+ + +L P K+ E+F
Sbjct: 538 QVACGHSLTVALTTKGHVY--------TMGSPVYGQLGIPQADGKL-PICVEWKLSESF- 587
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V E+ CG++H A+LT R + +T+G G NG+LGHG T P V+
Sbjct: 588 ------VEEIACGAYHVAVLTSR--------TEVYTWGKGANGRLGHGDTDDRNTPTLVE 633
Query: 246 ELPQYVYLVSVDCGLFHTSVV 266
L + S+ CG T+ +
Sbjct: 634 ALKDK-DVKSIACGTNFTAAI 653
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 63/149 (42%), Gaps = 20/149 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV---WDFHGHTVV 130
C V G +++A+ G ++ G S G + + P+ W V
Sbjct: 536 FCQVACGHSLTVALTTKGHVYTMG------SPVYGQLGIPQADGKLPICVEWKLSESFVE 589
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ACG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 590 EIACGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRNTPTLVEALKDKD-- 639
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + K + + +SMC
Sbjct: 640 -VKSIACGTNFTAAICLHKWVSGVDQSMC 667
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 59/134 (44%), Gaps = 15/134 (11%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G +L P+ + E + + ++ CG H ++V+ G+++SWG E G L
Sbjct: 293 GVKMDSLFPKSL-ESAVVLDVQNIACGGRHAALVTKQGEIFSWGEEAG------GRLGHG 345
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTG 350
D + P LI + VACG HT VT G L++WG G G+LG G
Sbjct: 346 VDSDVLHPKLIEALSNTNIEL-----VACGEYHTCAVTLSG-DLYTWGNGTYNCGLLGHG 399
Query: 351 KTIDFFAPAIVLWP 364
+ + P V P
Sbjct: 400 NQVSHWVPKRVNGP 413
>gi|145594132|ref|YP_001158429.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303469|gb|ABP54051.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 570
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 95/313 (30%), Positives = 129/313 (41%), Gaps = 43/313 (13%)
Query: 60 LEDDSKTNHKAPIKI--------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L D + T P+ + +V AG SLA+ +AG + WG DS G +
Sbjct: 70 LGDGTTTGSNTPLPVSLPAGTDATAVVAGDFHSLALTSAGTVLAWGRN---DSGQLGDGT 126
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
VSS TP V G TV VA G H +AL S G V +WG+N+ GQLG G
Sbjct: 127 TVSSSTPVVVRLPVGVTVTAVAAGFGHSLALTSTG--------VVLAWGSNSFGQLGDGT 178
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
S P + + V V GS H+ LT + ++ W G +GQLG
Sbjct: 179 TVSSSTPVAVRLPVGVT---VTAVAAGSGHSLALT------SVGAALAW--GNNFSGQLG 227
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GTT S+ P V+ LP + +V G H+ ++SAG +WG
Sbjct: 228 DGTTVSSSTPVAVR-LPVGTTVTAVAGGSHHSLALTSAGAALAWGGNF-----------S 275
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
+ GD + + P +A G AH+V +T G L +WG G LG G
Sbjct: 276 GQLGDGTTVSSSTPVVVSLPVGTTVTALAGGDAHSVALTSAGAAL-AWGSNGDGQLGDGT 334
Query: 352 TIDFFAPAIVLWP 364
D P V P
Sbjct: 335 NADSSVPIAVSLP 347
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 107/262 (40%), Gaps = 41/262 (15%)
Query: 92 ALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGET 148
A WG+ L D +T G S TP PV G V G H +AL SAG
Sbjct: 58 AFLAWGDNAFGQLGDGTTTG------SNTPLPVSLPAGTDATAVVAGDFHSLALTSAGT- 110
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+WG N++GQLG G S P ++ + V V G H+ LT
Sbjct: 111 -------VLAWGRNDSGQLGDGTTVSSSTPVVVRLPVGVT---VTAVAAGFGHSLALTS- 159
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ +G GQLG GTT S+ P V+ LP V + +V G H+ ++S
Sbjct: 160 -------TGVVLAWGSNSFGQLGDGTTVSSSTPVAVR-LPVGVTVTAVAAGSGHSLALTS 211
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVL 328
G +WG L +++ + +P+ + P VA G+ H++
Sbjct: 212 VGAALAWGNNFSGQLGDGTTVSSS------TPVAV-----RLPVGTTVTAVAGGSHHSLA 260
Query: 329 VTDDGYKLWSWGRGRSGVLGTG 350
+T G L +WG SG LG G
Sbjct: 261 LTSAGAAL-AWGGNFSGQLGDG 281
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 63/205 (30%), Positives = 84/205 (40%), Gaps = 22/205 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + +V AG SLA+ + GA WGN S G + VSS TP V G TV
Sbjct: 194 VTVTAVAAGSGHSLALTSVGAALAWGNN---FSGQLGDGTTVSSSTPVAVRLPVGTTVTA 250
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA GS H +AL SAG +WG N +GQLG G S P ++ +
Sbjct: 251 VAGGSHHSLALTSAGA--------ALAWGGNFSGQLGDGTTVSSSTPVVVSLPVGTT--- 299
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + G H+ LT ++ W G +GQLG GT + VP V
Sbjct: 300 VTALAGGDAHSVALTSAG------AALAW--GSNGDGQLGDGTNADSSVPIAVSLPAGAT 351
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG 276
H ++S G +WG
Sbjct: 352 ITAIAAHDGAHNLAITSTGAALAWG 376
>gi|414586169|tpg|DAA36740.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 1056
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/296 (27%), Positives = 127/296 (42%), Gaps = 68/296 (22%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
F P V V +ACG H A+ + G+ Y D G +N G LG G S
Sbjct: 304 FQPRLVESLSTCNVELIACGEFHTCAVTATGDLYTWGD------GTHNAGLLGHGSNVSH 357
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
PK + P V V+CG++HTAL+T +TFG G G LGHG
Sbjct: 358 WIPKRVSGPLDGLP--VSAVSCGTWHTALITS--------SGQLYTFGDGTFGVLGHGNR 407
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVV---------SSAGDVWSWG---------M 277
S P++V+ L + + +SV CG++HT+ V +S+G +++WG
Sbjct: 408 ASCSYPKEVESL-KGLRTISVSCGVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHG 466
Query: 278 EKGLGLCP-------NASLTRNEAGDAI--------------SPILISGNGPHG----PK 312
++ L P + + + G + SP+ P+ P+
Sbjct: 467 DRSSKLKPTCVPSLIDYNFHKAACGHTLTIGLTTSGHIFTVGSPVYGQLGNPNNDGRYPR 526
Query: 313 FQDP-------VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ V+VACG+ H ++T+ G ++++WG+G +G LG G D P +V
Sbjct: 527 LVEEQLGGGGVVEVACGSYHVAVLTNAG-EVYTWGKGTNGRLGHGDIADRKVPTLV 581
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 118/288 (40%), Gaps = 47/288 (16%)
Query: 91 GALWMWGN--CPL-----PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
G +++WG C D S + P P+ V VACG +H +
Sbjct: 220 GDIYVWGEVICDTISRSGSDRSAYSPGTTTDVLVPKPLESNVMLDVSYVACGVKHAALVT 279
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
E + +WG +G+LG G + +P+++E+ S V + CG FHT
Sbjct: 280 RQAEVF--------TWGEECSGRLGHGIGTNVFQPRLVESL---STCNVELIACGEFHTC 328
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+T D+ W G G LGHG+ S +P++V + + +V CG +HT
Sbjct: 329 AVTA---TGDL---YTWGDGTHNAGLLGHGSNVSHWIPKRVSGPLDGLPVSAVSCGTWHT 382
Query: 264 SVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
++++S+G ++++ G LG AS + + +++ + + V+C
Sbjct: 383 ALITSSGQLYTFGDGTFGVLGHGNRASCSYPKEVESLKGLRT-------------ISVSC 429
Query: 322 GAAHTVLVTD--------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V + KL++WG G LG G P V
Sbjct: 430 GVWHTAAVVEVIISQSNASSGKLFTWGDGDKYRLGHGDRSSKLKPTCV 477
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/262 (25%), Positives = 111/262 (42%), Gaps = 33/262 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + +V G + I ++G L+ +G+ G + S P V G +
Sbjct: 370 LPVSAVSCGTWHTALITSSGQLYTFGDGTF---GVLGHGNRASCSYPKEVESLKGLRTIS 426
Query: 132 VACGSEHVVALV----SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V+CG H A+V S G+ ++WG + +LG GDR S+L+P + +
Sbjct: 427 VSCGVWHTAAVVEVIISQSNASSGK---LFTWGDGDKYRLGHGDRSSKLKPTCVPSLID- 482
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ ++ CG T LT +T G GQLG+ P V+E
Sbjct: 483 --YNFHKAACGHTLTIGLT--------TSGHIFTVGSPVYGQLGN-PNNDGRYPRLVEEQ 531
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+V V CG +H +V+++AG+V++WG KG N L + D P L+
Sbjct: 532 LGGGGVVEVACGSYHVAVLTNAGEVYTWG--KGT----NGRLGHGDIADRKVPTLV---- 581
Query: 308 PHGPKFQDPVQVACGAAHTVLV 329
K + +VACG++ T +
Sbjct: 582 -EALKDRSVKRVACGSSFTAAI 602
Score = 61.6 bits (148), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 47/94 (50%), Gaps = 11/94 (11%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G VV+VACGS HV L +AGE Y+WG NG+LG GD R P ++E
Sbjct: 534 GGGVVEVACGSYHVAVLTNAGEV--------YTWGKGTNGRLGHGDIADRKVPTLVEALK 585
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
S V V CGS TA + K + M +S C
Sbjct: 586 DRS---VKRVACGSSFTAAICQHKWVSGMEQSQC 616
Score = 45.8 bits (107), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 62/136 (45%), Gaps = 19/136 (13%)
Query: 233 GTTQSALVPEQVKELPQYVYL-VS-VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
GTT LVP K L V L VS V CG+ H ++V+ +V++WG E C + L
Sbjct: 246 GTTTDVLVP---KPLESNVMLDVSYVACGVKHAALVTRQAEVFTWGEE-----C-SGRLG 296
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLG 348
+ P L+ + +ACG HT VT G L++WG G +G+LG
Sbjct: 297 HGIGTNVFQPRLVESLSTCNVEL-----IACGEFHTCAVTATG-DLYTWGDGTHNAGLLG 350
Query: 349 TGKTIDFFAPAIVLWP 364
G + + P V P
Sbjct: 351 HGSNVSHWIPKRVSGP 366
>gi|327273159|ref|XP_003221348.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Anolis
carolinensis]
Length = 1109
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 78/296 (26%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L ++ P + + +
Sbjct: 145 IIHVACGESHSLALSDQGRLFSWG------AGSDGQLGLTTTEDSVAVPRLIKKLNQEMI 198
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ +++ +
Sbjct: 199 LQVSCGNWHCLALAADGQFF--------AWGQNSHGQLGLGKEFPSQASPQRVKSLD-GI 249
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G +GQLG Q P VK L
Sbjct: 250 PLA--QVAAGGAHSFALS--------LSGAVFGWGKNTSGQLGLSDEQDRESPCHVKLL- 298
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ G V+++G G C L + D ++P + + G
Sbjct: 299 RTQKVVYISCGSDHTAVLTKTGGVFTFGA----GSC--GQLGHDSFNDEVNPRRVLELMG 352
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LG+G T + P+ V
Sbjct: 353 S--------EVSQIACGRQHTLAFVPSSGLIYAFGCGIKGQLGSGHTCNLKCPSPV 400
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 112/245 (45%), Gaps = 46/245 (18%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
H +V +VACG H + L+ GE Y + G N GQLG ++E +I
Sbjct: 90 IHERSVKEVACGGNHSIFLLEDGEVY--------TCGVNTKGQLG-HEKEGSKPEQIGAL 140
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPE 242
+Q + V CG H+ L+ + R +++G G +GQLG TT+ S VP
Sbjct: 141 ADQH----IIHVACGESHSLALSDQGR--------LFSWGAGSDGQLGLTTTEDSVAVPR 188
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGD 296
+K+L Q + ++ V CG +H +++ G ++WG + GLG AS R ++ D
Sbjct: 189 LIKKLNQEM-ILQVSCGNWHCLALAADGQFFAWGQNSHGQLGLGKEFPSQASPQRVKSLD 247
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
I P+ QVA G AH+ ++ G ++ WG+ SG LG D
Sbjct: 248 GI-PL---------------AQVAAGGAHSFALSLSG-AVFGWGKNTSGQLGLSDEQDRE 290
Query: 357 APAIV 361
+P V
Sbjct: 291 SPCHV 295
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG ++S + G S +P V VV
Sbjct: 249 IPLAQVAAGGAHSFALSLSGAVFGWGK----NTSGQLGLSDEQDRESPCHVKLLRTQKVV 304
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSP 189
++CGS+H L G +++GA + GQLG + P +++E +
Sbjct: 305 YISCGSDHTAVLTKTGGV--------FTFGAGSCGQLGHDSFNDEVNPRRVLELMGSE-- 354
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 355 --VSQIACGRQHTLAFV----PSS---GLIYAFGCGIKGQLGSGHTCNLKCPSPVK 401
>gi|298714248|emb|CBJ27384.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 635
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 113/260 (43%), Gaps = 48/260 (18%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P P+ D G + +V GS H +A G+ Y WG +GQLGLGDRES+
Sbjct: 185 PRPIRDLVGEEICQVQAGSSHCLAGSMGGD--------LYVWGRGESGQLGLGDRESKQI 236
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + F + + V +V G H+ +LT +++G G+ G+LG G
Sbjct: 237 PVLNAGFPEGT--EVSQVAVGENHSLVLTK--------AGGVYSWGHGDRGRLGVGACWR 286
Query: 238 ALVPEQVKEL---PQYVYLVS------VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
VP+ K + P ++ S V CG V++A +VWSWG +G L +
Sbjct: 287 VGVPQSEKNIFPTPMLLHTFSKEVVRQVSCGPSFCLAVTAA-NVWSWGAGEGCVLGHGDT 345
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAAHT---VLV--TDDGYKLWSWGR 341
LTR +P+ I F+ V Q CG H VLV DG L++WG
Sbjct: 346 LTRE------TPVQIEA-------FKGSVVLQAECGTWHCAALVLVPPCKDGGYLYTWGS 392
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G L G PAIV
Sbjct: 393 GYHGQLALGTRQVQPTPAIV 412
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 128/296 (43%), Gaps = 57/296 (19%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF-HGHTVVK 131
+IC V+AG LA G L++WG +S G S P F G V +
Sbjct: 195 EICQVQAGSSHCLAGSMGGDLYVWGR---GESGQLGLGDRESKQIPVLNAGFPEGTEVSQ 251
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG----------DRESRLRPKII 181
VA G H + L AG YSWG + G+LG+G ++ P ++
Sbjct: 252 VAVGENHSLVLTKAGGV--------YSWGHGDRGRLGVGACWRVGVPQSEKNIFPTPMLL 303
Query: 182 ETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
TF+++ V +V+CG SF A+ + W++G GE LGHG T +
Sbjct: 304 HTFSKE---VVRQVSCGPSFCLAVTA----------ANVWSWGAGEGCVLGHGDTLTRET 350
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVV------SSAGDVWSWGMEKGLGLCPNASL-TRN- 292
P Q++ V L +CG +H + + G +++WG G +L TR
Sbjct: 351 PVQIEAFKGSVVL-QAECGTWHCAALVLVPPCKDGGYLYTWGS----GYHGQLALGTRQV 405
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ AI L++ Q +V CG+ H VT DG +L++WG R+G LG
Sbjct: 406 QPTPAIVAKLLATQ-------QLLRKVWCGSHHCAAVTTDG-ELYTWGSNRTGCLG 453
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 96/223 (43%), Gaps = 31/223 (13%)
Query: 152 EDLVCYSWGANNNG----QLGLG-----DRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
ED SWGA G +LG G D + + P+ I + + +V GS H
Sbjct: 150 EDHDVLSWGAKGIGATGHRLGTGAFDDDDEDLYMEPRPIRDLVGEE---ICQVQAGSSHC 206
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+ + + +G GE+GQLG G +S +P P+ + V G H
Sbjct: 207 LAGS--------MGGDLYVWGRGESGQLGLGDRESKQIPVLNAGFPEGTEVSQVAVGENH 258
Query: 263 TSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
+ V++ AG V+SWG G+G C + ++E +P+L+ H + Q
Sbjct: 259 SLVLTKAGGVYSWGHGDRGRLGVGACWRVGVPQSEKNIFPTPMLL-----HTFSKEVVRQ 313
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V+CG + + VT +WSWG G VLG G T+ P +
Sbjct: 314 VSCGPSFCLAVT--AANVWSWGAGEGCVLGHGDTLTRETPVQI 354
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 79/187 (42%), Gaps = 21/187 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ V G LA+ A +W WG C L T ++ TP + F G V+
Sbjct: 311 VRQVSCGPSFCLAV-TAANVWSWGAGEGCVLGHGDT------LTRETPVQIEAFKGSVVL 363
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+ CG+ H ALV G L Y+WG+ +GQL LG R+ + P I+ +
Sbjct: 364 QAECGTWHCAALVLVPPCKDGGYL--YTWGSGYHGQLALGTRQVQPTPAIVAKL-LATQQ 420
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ +V CGS H A +T + +T+G G LG P + + +P++
Sbjct: 421 LLRKVWCGSHHCAAVT--------TDGELYTWGSNRTGCLGRALPDLNNEPSRARFVPRF 472
Query: 251 VYLVSVD 257
V L D
Sbjct: 473 VLLGKED 479
>gi|226507778|ref|NP_001140994.1| uncharacterized protein LOC100273073 [Zea mays]
gi|194702086|gb|ACF85127.1| unknown [Zea mays]
gi|413922319|gb|AFW62251.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 1 [Zea mays]
gi|413922320|gb|AFW62252.1| putative regulator of chromosome condensation (RCC1) family protein
isoform 2 [Zea mays]
Length = 389
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/358 (27%), Positives = 149/358 (41%), Gaps = 65/358 (18%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK---TNHKAPIKICSVKAGG 81
SL C DG+L G N Q T+G P + +S + A KI GG
Sbjct: 52 NSLAICDDGRLFTWGWN--------QRGTLGHPPETKTESSPGPVDALAGFKIVQAAIGG 103
Query: 82 MMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
LA+D+ G + WG C E G + P P V +VA G
Sbjct: 104 WHCLAVDDKGRAYAWGGNEYGQCGEEPERKEDGTRALRRDIPIPQRCALKLKVRQVAAGG 163
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H V L G ++WG GD + P ++ + V +
Sbjct: 164 THSVVLTQEGH--------VWTWGQ----PWPPGDIKQISTPVRVQGLEK-----VRVIA 206
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G+FH LT + + W +G E GQLG G TQ P +V+ L + LV +
Sbjct: 207 VGAFHNLALTE--------DVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSD-LSLVDI 257
Query: 257 DCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPI---LISGNGPHGP 311
G +H++ ++ G+V++WG E G LG + S + P+ L++G
Sbjct: 258 AAGGWHSTALTIDGEVYAWGRGEHGRLGFGDDKS-------SHMVPLKVELLAG------ 304
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA--IVLWPPLT 367
+D VQV+CG H+V + DG +++S+GRG G LG G+ + P + PPL+
Sbjct: 305 --EDIVQVSCGGTHSVALARDG-RMFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLS 359
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 123/264 (46%), Gaps = 38/264 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K+ V AGG S+ + G +W WG P P G +S TP V V
Sbjct: 154 LKVRQVAAGGTHSVVLTQEGHVWTWGQ-PWP----PGDIKQIS--TPVRVQGLE--KVRV 204
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+A G+ H +AL ED++ ++WG N GQLG GD + R +P +E + S
Sbjct: 205 IAVGAFHNLALT--------EDVILWAWGNNEYGQLGTGDTQPRSQPIRVEGLSDLS--- 253
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA-LVPEQVKELPQY 250
+ ++ G +H+ LT ++ + +G GE+G+LG G +S+ +VP +V EL
Sbjct: 254 LVDIAAGGWHSTALT--------IDGEVYAWGRGEHGRLGFGDDKSSHMVPLKV-ELLAG 304
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN---EAGDAISPILISGNG 307
+V V CG H+ ++ G ++S+G L +T E + P+ S +G
Sbjct: 305 EDIVQVSCGGTHSVALARDGRMFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLSSSRDG 364
Query: 308 PHGPKFQDPVQVACGAAHTVLVTD 331
K+ VACG HT+ + +
Sbjct: 365 RWQAKY-----VACGGRHTLAIAE 383
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 85/189 (44%), Gaps = 25/189 (13%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLG+G E + P +E P+AV V GS ++ + R
Sbjct: 12 AWGSGEDGQLGMGGNEEKDWPHFVEALG---PYAVTAVVAGSRNSLAICDDGR------- 61
Query: 218 MCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ P V L + +V G +H V G ++WG
Sbjct: 62 -LFTWGWNQRGTLGHPPETKTESSPGPVDALAGF-KIVQAAIGGWHCLAVDDKGRAYAWG 119
Query: 277 MEKGLGLCPNASLTRNEAGDAIS---PILISGNGPHGPKFQDPV-QVACGAAHTVLVTDD 332
+ G C + + A+ PI P + V QVA G H+V++T +
Sbjct: 120 GNE-YGQCGEEPERKEDGTRALRRDIPI------PQRCALKLKVRQVAAGGTHSVVLTQE 172
Query: 333 GYKLWSWGR 341
G+ +W+WG+
Sbjct: 173 GH-VWTWGQ 180
Score = 44.3 bits (103), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 58/148 (39%), Gaps = 16/148 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + + AGG S A+ G ++ WG G S P V G +V+
Sbjct: 252 LSLVDIAAGGWHSTALTIDGEVYAWGRGE--HGRLGFGDDKSSHMVPLKVELLAGEDIVQ 309
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE------TFN 185
V+CG H VAL G +S+G ++G+LG G + + P + + +
Sbjct: 310 VSCGGTHSVALARDGR--------MFSYGRGDHGRLGYGRKVTTGHPMELPINLPPLSSS 361
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPND 213
+D W V CG HT + D
Sbjct: 362 RDGRWQAKYVACGGRHTLAIAEWTEATD 389
>gi|147900291|ref|NP_001086738.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus laevis]
gi|83405253|gb|AAI10973.1| MGC81587 protein [Xenopus laevis]
Length = 897
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 44/302 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG+ + + G S+ + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFSWGHA----AHGQIGVSIAEDYIRVPRNIKSLSDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
VACG H +AL Y SWG N GQLGLG ++ P+ I++ + P+
Sbjct: 142 VACGHHHSLALSKESNIY--------SWGQNQYGQLGLGSEKRKESAPRHIKSLS-GIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A + G H+ LT + + +G + GQLG P +K L +
Sbjct: 193 A--HIAAGGGHSFALT--------ISGAIFGWGRNKFGQLGLNDETDRSDPALLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISGNG 307
++ + CG HT+ ++ G V+++G G G L N A ++P + GN
Sbjct: 242 QKIIYICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSASHEVNPRKVFELMGN- 294
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
Q+ACG HT+ +++S+G G +G LG G T + +P++V LT
Sbjct: 295 -------IVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLT 347
Query: 368 EE 369
E
Sbjct: 348 HE 349
Score = 78.6 bits (192), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 70/256 (27%), Positives = 102/256 (39%), Gaps = 37/256 (14%)
Query: 56 APDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS- 114
A D + + I+I V G SLA+ ++ WG + G L S
Sbjct: 121 AEDYIRVPRNIKSLSDIQIVQVACGHHHSLALSKESNIYSWG------QNQYGQLGLGSE 174
Query: 115 ---SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
P + G +A G H AL +G + WG N GQLGL D
Sbjct: 175 KRKESAPRHIKSLSGIPFAHIAAGGGHSFALTISG--------AIFGWGRNKFGQLGLND 226
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R P ++++ + + CG HTA LT E +TFG G GQLG
Sbjct: 227 ETDRSDPALLKSLRSQK---IIYICCGEDHTAALTK--------EGGVFTFGAGGYGQLG 275
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLT 290
H + + P +V EL + + + CG HT + V S+G ++S+ GL N L
Sbjct: 276 HNSASHEVNPRKVFELMGNI-VTQIACGRQHTLAFVPSSGRIYSF------GLGGNGQLG 328
Query: 291 RNEAGDAISPILISGN 306
+ SP ++ GN
Sbjct: 329 IGSTSNKKSPSMVKGN 344
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 37/199 (18%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E + P+ + F + V +V CG+ HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKN---VRDVGCGNRHTGFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L + +V+V CG HT ++ G V+SWG
Sbjct: 53 GTVYTCGCNDLGQLGHDKSRKK--PEQVGALDAQI-IVAVSCGEAHTLALNDKGQVFSWG 109
Query: 277 M----EKGLGLCPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+ G+ + + + RN ++S I I VQVACG H++ ++
Sbjct: 110 HAAHGQIGVSIAEDYIRVPRNIK--SLSDIQI-------------VQVACGHHHSLALSK 154
Query: 332 DGYKLWSWGRGRSGVLGTG 350
+ ++SWG+ + G LG G
Sbjct: 155 ES-NIYSWGQNQYGQLGLG 172
>gi|351710402|gb|EHB13321.1| Serine/threonine-protein kinase Nek8 [Heterocephalus glaber]
Length = 709
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/321 (28%), Positives = 144/321 (44%), Gaps = 42/321 (13%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALW 94
LG SG +L+P +EQ LE S + I V G + + + + G +
Sbjct: 373 LGSSG-GALLPGAVEQPQPQFFSRFLEGQSG------VTIKHVACGDLFTACLTDRGIIM 425
Query: 95 MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDL 154
+G+ + G SL P+ V G+ +V+VACG+ HV+AL + E
Sbjct: 426 TFGSG---SNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTEREL------ 476
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIET-FNQDSPWAVYEVTCGSFHTALLTHRKRP-- 211
++WG + G+LGLG RES P+ + Q++ W V CG + +LT R R
Sbjct: 477 --FAWGRGDRGRLGLGTRESHSCPQQVPMPPGQEAQW----VVCGIDSSMILTVRGRALA 530
Query: 212 ---NDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
N + F LGE ++ + P + L Q L+ VD G H++ V+
Sbjct: 531 CGSNRFNKLGLDHFSLGEEADPQQQVEEALSFTPLRSAPLDQEPLLI-VDLGTAHSAAVT 589
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
++GD +++G + + L N + +P + G G K VACG A TV
Sbjct: 590 ASGDCYTFGSNQ------HGQLGTNARRGSRAPCQV--QGLEGIKM---AMVACGDAFTV 638
Query: 328 LVTDDGYKLWSWGRGRSGVLG 348
+ +G +++SWG+G G LG
Sbjct: 639 AIGAEG-EVYSWGKGARGRLG 658
Score = 45.4 bits (106), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 63/147 (42%), Gaps = 23/147 (15%)
Query: 233 GTTQSALVPEQVKE-LPQY----------VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
G++ AL+P V++ PQ+ V + V CG T+ ++ G + ++G
Sbjct: 374 GSSGGALLPGAVEQPQPQFFSRFLEGQSGVTIKHVACGDLFTACLTDRGIIMTFGSGS-- 431
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
N L D P ++ + + VQVACGA+H VL +L++WGR
Sbjct: 432 ----NGCLGHGSLTDISQPTIVEALLGY-----EMVQVACGASH-VLALSTERELFAWGR 481
Query: 342 GRSGVLGTGKTIDFFAPAIVLWPPLTE 368
G G LG G P V PP E
Sbjct: 482 GDRGRLGLGTRESHSCPQQVPMPPGQE 508
Score = 41.6 bits (96), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 14/134 (10%)
Query: 82 MMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVSSFTPSPVWDFHGHTVVKVACGSEH 138
++ L ++ A+ G+C S+ G + S P V G + VACG
Sbjct: 577 IVDLGTAHSAAVTASGDCYTFGSNQHGQLGTNARRGSRAPCQVQGLEGIKMAMVACGDAF 636
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
VA+ + GE Y SWG G+LG D ++ L P+ ++ ++ P+ V V+C
Sbjct: 637 TVAIGAEGEVY--------SWGKGARGRLGRRDEDAGL-PRPVQ-LDEMHPYTVTSVSCC 686
Query: 199 SFHTALLTHRKRPN 212
+T LL R P+
Sbjct: 687 HGNT-LLAVRLSPS 699
>gi|383851572|ref|XP_003701306.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Megachile rotundata]
Length = 864
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 82/289 (28%), Positives = 130/289 (44%), Gaps = 51/289 (17%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLV--SSFTPSPVWD- 123
P K+ V G +L A ++ G S EG G S + SS +P V+D
Sbjct: 158 PEKVTHVACGRAHTLISTGAQKIFACG------SDQEGQLGRGTSAIGDSSSSPVLVYDA 211
Query: 124 -FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKII 181
G ++++A GS H +AL+S G ++WG+N GQLGL D + +P +
Sbjct: 212 GLAGSKILQLAAGSHHSLALISDG--------GVFAWGSNLEGQLGLPDVSGLVNKPTKV 263
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
P V +++ G +H+A LT + + G E+G+LG S +
Sbjct: 264 HI-----PEPVKQISAGYYHSAFLTES--------GLVYICGESESGKLGIDVNFSTQIT 310
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAIS 299
+ +LP V V CG HT V++ G+++ G LGL N + + +
Sbjct: 311 PKQMQLPSPA--VHVACGGHHTVVLAENGNIYCTGSNSNGQLGLGTNVT-------ELHT 361
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P L+S +++CG +HT +VT+ G KL++ G GR G LG
Sbjct: 362 PKLLSRGMLQNETIS---RISCGESHTAIVTESG-KLFTCGDGRHGKLG 406
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 101/252 (40%), Gaps = 59/252 (23%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV + CG EH + +G + +G+N+ GQLGLG R +P ++
Sbjct: 109 VVSITCGDEHSAVICQSGR--------LFVFGSNDWGQLGLGHRNHISKPSCVKVL---K 157
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V V CG HT + T ++ + G + GQLG GT+ P
Sbjct: 158 PEKVTHVACGRAHTLISTGAQK--------IFACGSDQEGQLGRGTSAIG----DSSSSP 205
Query: 249 QYVY--------LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAI 298
VY ++ + G H+ + S G V++WG +E LGL + L
Sbjct: 206 VLVYDAGLAGSKILQLAAGSHHSLALISDGGVFAWGSNLEGQLGLPDVSGLV-------- 257
Query: 299 SPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG--------- 348
N P +PV Q++ G H+ +T+ G ++ G SG LG
Sbjct: 258 -------NKPTKVHIPEPVKQISAGYYHSAFLTESGL-VYICGESESGKLGIDVNFSTQI 309
Query: 349 TGKTIDFFAPAI 360
T K + +PA+
Sbjct: 310 TPKQMQLPSPAV 321
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 24/146 (16%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
PSP V VACG H V L G Y C G+N+NGQLGLG + L
Sbjct: 317 PSPA--------VHVACGGHHTVVLAENGNIY------C--TGSNSNGQLGLGTNVTELH 360
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+ + + ++CG HTA++T + +T G G +G+LG ++
Sbjct: 361 TPKLLSRGMLQNETISRISCGESHTAIVTESGK--------LFTCGDGRHGKLGLEENEN 412
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHT 263
+ + + +++ V CG HT
Sbjct: 413 NVHELTFVQRYKELFVSKVACGGCHT 438
>gi|449462158|ref|XP_004148808.1| PREDICTED: uncharacterized protein LOC101222741 [Cucumis sativus]
gi|449506967|ref|XP_004162897.1| PREDICTED: uncharacterized LOC101222741 [Cucumis sativus]
Length = 1120
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 84/292 (28%), Positives = 130/292 (44%), Gaps = 35/292 (11%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
V G + A+ G L+ WG+ ++ G S VS + P V G V V CG
Sbjct: 338 VACGEFHTCAVTITGELYTWGD-GTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVTSVTCG 396
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + S G+ +++G G LG GDRE+ PK +E+ S V
Sbjct: 397 PWHTALVTSMGQ--------LFTFGDGTFGALGHGDRENISYPKEVESL---SGLRTIAV 445
Query: 196 TCGSFHTALLTH---RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
CG +HTA + + + + +T+G G+ +LGHG + L P V L Y +
Sbjct: 446 ACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCVPALIDYDF 505
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V CG T ++++G V+S G + LG N + D P L+
Sbjct: 506 H-KVACGHSITVGLTTSGQVFSMGSTVYGQLG---------NPSADGKIPCLVEDK---- 551
Query: 311 PKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + V+ V+CGA H V++T ++++WG+G +G LG G D P +V
Sbjct: 552 -LFGESVEEVSCGAYHVVVLTSKN-EVYTWGKGANGRLGHGDVEDRKTPTLV 601
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 127/299 (42%), Gaps = 61/299 (20%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSSFT--------PSP-----VWDFHGHTVVKVAC 134
D G +++WG + D+ + G SS+ P P V D H +AC
Sbjct: 235 DALGDVYIWGEI-VGDNIVKIGAEKNSSYVTLRTDVLLPRPLESNIVLDIH-----HIAC 288
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H + GE + +WG + G+LG G + ++P+++E+ S +
Sbjct: 289 GVRHAALVTRQGEVF--------TWGEESGGRLGHGVVKDVIQPRMVESLAASS---IGF 337
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V CG FHT +T E W G G LGHG+ S +P++V + + +
Sbjct: 338 VACGEFHTCAVTITG------ELYTWGDGTHNAGLLGHGSDVSHWIPKRVSGPLEGLQVT 391
Query: 255 SVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
SV CG +HT++V+S G ++++ G LG +++ + +++S +
Sbjct: 392 SVTCGPWHTALVTSMGQLFTFGDGTFGALGHGDRENISYPKEVESLSGLRT--------- 442
Query: 313 FQDPVQVACGAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ VACG HT V+VT KL++WG G LG G P V
Sbjct: 443 ----IAVACGVWHTAAVVEVIVTQSSSSISSGKLFTWGDGDKNRLGHGDKEPRLKPTCV 497
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 37/183 (20%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-----WDFHGHTVVKVACGSEHVVALVSA 145
G L+ WG+ D + G P+ V +DFH KVACG V L ++
Sbjct: 470 GKLFTWGD---GDKNRLGHGDKEPRLKPTCVPALIDYDFH-----KVACGHSITVGLTTS 521
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET--FNQDSPWAVYEVTCGSFHTA 203
G+ + S G+ GQLG + ++ P ++E F + +V EV+CG++H
Sbjct: 522 GQVF--------SMGSTVYGQLGNPSADGKI-PCLVEDKLFGE----SVEEVSCGAYHVV 568
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+LT + +T+G G NG+LGHG + P V+ L ++ + CG +T
Sbjct: 569 VLTSKNE--------VYTWGKGANGRLGHGDVEDRKTPTLVEALKDR-HVKYIACGSNYT 619
Query: 264 SVV 266
+ +
Sbjct: 620 AAI 622
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G +V +V+CG+ HVV L S E Y +WG NG+LG GD E R P ++E
Sbjct: 554 GESVEEVSCGAYHVVVLTSKNEVY--------TWGKGANGRLGHGDVEDRKTPTLVEALK 605
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CGS +TA + K + +S C
Sbjct: 606 DRH---VKYIACGSNYTAAICLHKWVSSAEQSQC 636
>gi|449270678|gb|EMC81335.1| putative E3 ubiquitin-protein ligase HERC5, partial [Columba livia]
Length = 314
Score = 82.0 bits (201), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/197 (32%), Positives = 95/197 (48%), Gaps = 27/197 (13%)
Query: 86 AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVACGSEHVVALV 143
++ G L+ WG ++ + G S ++ P P V G + ++A G H VA+
Sbjct: 1 SVCEGGELFTWGQ----NAHGQLGVSSQNALIPKPQLVERLKGIPLAQIAAGGAHNVAVS 56
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+G Y SWG N+ GQLGLG R P I+ W V+CG+ HTA
Sbjct: 57 LSGAVY--------SWGKNDFGQLGLGHTRDRGCPSYIKALEH---WKTVFVSCGADHTA 105
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+L+ E + TFG G +GQLGH +T++ LVP V EL + + CG HT
Sbjct: 106 VLSK--------EGLVCTFGAGGSGQLGHNSTRNELVPRLVAEL-WGARVSQIACGRQHT 156
Query: 264 SV-VSSAGDVWSWGMEK 279
V V S V+S+G ++
Sbjct: 157 LVYVPSLDTVFSFGSDE 173
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 157 YSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
++WG N +GQLG+ + + + +P+++E + P A ++ G H ++ L
Sbjct: 9 FTWGQNAHGQLGVSSQNALIPKPQLVERL-KGIPLA--QIAAGGAHNVAVS--------L 57
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+++G + GQLG G T+ P +K L + V V CG HT+V+S G V ++
Sbjct: 58 SGAVYSWGKNDFGQLGLGHTRDRGCPSYIKALEHW-KTVFVSCGADHTAVLSKEGLVCTF 116
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G L N+ TRNE + P L++ G + Q+ACG HT++
Sbjct: 117 GAGGSGQLGHNS--TRNE----LVPRLVAE--LWGARVS---QIACGRQHTLVYVPSLDT 165
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQ 372
++S+G G LG + + P + P T + Q
Sbjct: 166 VFSFGSDEEGQLGDKRKPNQLIPLPIDSPVNTGKSHQ 202
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 41/211 (19%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQLG S N+L+P P +E I + + AGG ++A+ +GA
Sbjct: 17 GQLGVSSQNALIP----------KPQLVE------RLKGIPLAQIAAGGAHNVAVSLSGA 60
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
++ WG D G PS + V V+CG++H L G
Sbjct: 61 VYSWGK---NDFGQLGLGHTRDRGCPSYIKALEHWKTVFVSCGADHTAVLSKEG------ 111
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA--VYEVTCGSFHTALLTHRKR 210
LVC ++GA +GQLG + L P+++ W V ++ CG HT +
Sbjct: 112 -LVC-TFGAGGSGQLGHNSTRNELVPRLVAEL-----WGARVSQIACGRQHTLVYV---- 160
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
L+++ ++FG E GQLG + L+P
Sbjct: 161 --PSLDTV-FSFGSDEEGQLGDKRKPNQLIP 188
>gi|260798953|ref|XP_002594464.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
gi|229279698|gb|EEN50475.1| hypothetical protein BRAFLDRAFT_72132 [Branchiostoma floridae]
Length = 1711
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 134/362 (37%), Gaps = 106/362 (29%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV--SSFTPS---PVWD 123
K P+ +V + G +A+ ++ WG P G L+ S + P
Sbjct: 861 KPPLSQAAVVSCGQQHVALLTEEGVYTWGK---PHQGRLGHGQLLGDSGYVPPMRVETLS 917
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
V+ VACG EH +AL G Y+WG++ GQLGLGD + + P ++
Sbjct: 918 IQRVQVMAVACGQEHTLALCDNG---------VYAWGSSTYGQLGLGDWDRQTHPTLVTQ 968
Query: 184 F-----------------------------------------NQDSPWAV------YEVT 196
N + P V +V+
Sbjct: 969 LKDVFCVAVATGQYHSAALDGEGRVWMWGWGVHGQLGQGNAENLNKPHLVAAVQNAVQVS 1028
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G HTA+LT +TFG G +GQLGHG T +P++V+ + V V
Sbjct: 1029 TGYAHTAVLTRSGE--------VFTFGCGLHGQLGHGATDKVSIPQRVQGIMGKV--AQV 1078
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGL---GLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
CGLFHT VV+S+ V+++G + L + R SP G G F
Sbjct: 1079 ACGLFHTVVVTSSQQVYTFGRHPQVWKQYLQNSRRQARASTSYTQSPA-KHAMGLSGELF 1137
Query: 314 QDPV-----------QVACGAAHTVLVT----------------DDGYKLWSWGRGRSGV 346
+ P+ QV GA H +L+T D K+W WGR G
Sbjct: 1138 K-PLWVQCRVEGRIRQVVAGAVHNMLLTSSVVAIAAGEDFSVAVDRSGKVWVWGRNSHGQ 1196
Query: 347 LG 348
LG
Sbjct: 1197 LG 1198
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 104/234 (44%), Gaps = 39/234 (16%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG----LGDRESRLRPKIIETFNQD 187
V+CG +HV L G Y+WG + G+LG LGD + P +ET +
Sbjct: 870 VSCGQQHVALLTEEG---------VYTWGKPHQGRLGHGQLLGD-SGYVPPMRVETLSIQ 919
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V CG HT L ++ + +G GQLG G P V +L
Sbjct: 920 R-VQVMAVACGQEHTLALC---------DNGVYAWGSSTYGQLGLGDWDRQTHPTLVTQL 969
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V+ V+V G +H++ + G VW WG G+ + L + A + P L++
Sbjct: 970 -KDVFCVAVATGQYHSAALDGEGRVWMWGW--GV----HGQLGQGNAENLNKPHLVAA-- 1020
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q+ VQV+ G AHT ++T G +++++G G G LG G T P V
Sbjct: 1021 -----VQNAVQVSTGYAHTAVLTRSG-EVFTFGCGLHGQLGHGATDKVSIPQRV 1068
>gi|146298949|ref|YP_001193540.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
gi|146153367|gb|ABQ04221.1| regulator of chromosome condensation, RCC1 [Flavobacterium
johnsoniae UW101]
Length = 1679
Score = 82.0 bits (201), Expect = 7e-13, Method: Composition-based stats.
Identities = 73/286 (25%), Positives = 114/286 (39%), Gaps = 48/286 (16%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPD--SSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ AG ++A+ N G LW WGN +ST ++ + + W A
Sbjct: 23 TAAAGYSHTVAVRNDGTLWTWGNNDEGQLGNSTPAAINIPTKMGTANNWK-------TAA 75
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAV 192
G H VAL + G ++WG GQLG G+ + P+ I T N W
Sbjct: 76 AGWGHTVALKTDG--------TLWAWGYGRLGQLGNGNYNTNFNLPQQIGTEND---WQT 124
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ G HT L + + W +G +GQLG+GT+ P ++ +
Sbjct: 125 --IAAGHGHTVALKN--------DGTLWAWGNNFSGQLGNGTSFDRNTPTKIGSDSNW-- 172
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+++ G +T + G +W+WG + G + + T N I
Sbjct: 173 -LAISAGGLYTIALKKDGTLWAWG-KNTYGTLGDGTTTNNRVPKQIG------------T 218
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
D +A G+ HT+ + +DG LW WG+ G LG TID P
Sbjct: 219 DTDWKTIAAGSDHTIAIKNDG-SLWIWGKNTYGALGDNTTIDKIVP 263
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 78/292 (26%), Positives = 123/292 (42%), Gaps = 55/292 (18%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVVKV 132
++ AG ++A+ N G LW WGN + G +SF TP+ +
Sbjct: 124 TIAAGHGHTVALKNDGTLWAWGN------NFSGQLGNGTSFDRNTPTKI----------- 166
Query: 133 ACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
GS+ +SAG Y +D ++WG N G LG G + PK I T D+
Sbjct: 167 --GSDSNWLAISAGGLYTIALKKDGTLWAWGKNTYGTLGDGTTTNNRVPKQIGT---DTD 221
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
W + GS HT + + + W +G G LG TT +VP ++
Sbjct: 222 WKT--IAAGSDHTIAIKN--------DGSLWIWGKNTYGALGDNTTIDKIVPTKIGTDTD 271
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ S + G+ +T + + G +W+WG G+ N S +++ P+ I
Sbjct: 272 WK---SAEGGVDYTVAIKTDGTLWAWGYNAD-GVFGNGSKI-----NSLIPVQIGTE--- 319
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V+ G+ HTV V D LWSWG G LG G +I+ P ++
Sbjct: 320 ----KNWQMVSGGSVHTVAVKTD-ESLWSWGNNSYGQLGDGTSIEKNIPTLL 366
Score = 60.1 bits (144), Expect = 3e-06, Method: Composition-based stats.
Identities = 58/244 (23%), Positives = 95/244 (38%), Gaps = 45/244 (18%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + + + P KI S + AGG+ ++A+ G LW WG T G +
Sbjct: 152 LGNGTSFDRNTPTKIGSDSNWLAISAGGLYTIALKKDGTLWAWGK---NTYGTLGDGTTT 208
Query: 114 SSFTPSPV-----WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
++ P + W +A GS+H +A+ + G + WG N G LG
Sbjct: 209 NNRVPKQIGTDTDWK-------TIAAGSDHTIAIKNDGSL--------WIWGKNTYGALG 253
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
++ P I T D+ W E + A+ T + W +G +G
Sbjct: 254 DNTTIDKIVPTKIGT---DTDWKSAEGGV-DYTVAIKT---------DGTLWAWGYNADG 300
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
G+G+ ++L+P Q+ + V G HT V + +WSWG L S
Sbjct: 301 VFGNGSKINSLIPVQIGTEKNWQM---VSGGSVHTVAVKTDESLWSWGNNSYGQLGDGTS 357
Query: 289 LTRN 292
+ +N
Sbjct: 358 IEKN 361
>gi|149042013|gb|EDL95854.1| rCG58270 [Rattus norvegicus]
Length = 3507
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 2740 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 2796
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 2797 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 2845
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 2846 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 2897
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 2898 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 2946
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 2947 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 2983
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 2885 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 2938
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 2939 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 2990
Query: 189 PWAVYEVTCGSFHTALLT 206
+ +++ G H+A T
Sbjct: 2991 ---IRQISAGRCHSAAWT 3005
>gi|356536635|ref|XP_003536842.1| PREDICTED: uncharacterized protein LOC100812689 [Glycine max]
Length = 1078
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 90/329 (27%), Positives = 143/329 (43%), Gaps = 70/329 (21%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL- 112
G P +E + TN + V G S A+ +G L+ WG+ T G L
Sbjct: 301 FGRPHLVESLAITN------VTFVACGEYHSCAVSTSGDLFTWGD------GTHGAGLLG 348
Query: 113 ----VSSFTPSPV-WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
VS + P V G VV VACG+ H S G+ +++G G L
Sbjct: 349 HGTDVSYWIPKRVSGPLEGLQVVAVACGTWHSALATSNGK--------LFTFGDGRFGVL 400
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE--------SMC 219
G G+R S PK ++ S + +V CG +H+A + D+++
Sbjct: 401 GHGNRASVAYPKEVQLL---SGYKAIKVACGVWHSAAII------DVMDLSGSKASAKRL 451
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-ME 278
+T+G G+ +LGH ++ L P V + +Y + V CG T ++++G V+S G
Sbjct: 452 FTWGDGDQYRLGHANKETYLEPTCVAAVAEYNFH-QVACGYTMTVALTASGHVFSMGGTT 510
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV------QVACGAAHTVLVTDD 332
G PN+ D PIL+ +D + +++CGA H ++T
Sbjct: 511 YGQLGNPNS--------DGKVPILV----------RDKLVGEFVEEISCGANHVAVLTSR 552
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+L++WGRG +G LG G T D +P +V
Sbjct: 553 S-ELYTWGRGANGRLGHGDTDDKKSPTLV 580
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/290 (23%), Positives = 127/290 (43%), Gaps = 43/290 (14%)
Query: 87 IDNAGALWMWGNCPLPDSSTEGGFSLVSSF------TPSPVWDFHGHTVVKVACGSEHVV 140
I++ G +++WG +S +G S + +F TP P+ V ++ G H+
Sbjct: 215 IESLGDVYIWGEVWADGNSFDGLGSQLQAFCKTDVLTPKPLESDVVLDVHQIGPGDRHIA 274
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
+ GE + +WG ++ G+LG G + RP ++E+ + V V CG +
Sbjct: 275 LVTRQGEVF--------TWGEDSGGRLGHGFEKDFGRPHLVESLAITN---VTFVACGEY 323
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
H+ ++ D+ W G G LGHGT S +P++V + + +V+V CG
Sbjct: 324 HSCAVS---TSGDLF---TWGDGTHGAGLLGHGTDVSYWIPKRVSGPLEGLQVVAVACGT 377
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
+H+++ +S G ++++G + G+ + + R L+SG ++VA
Sbjct: 378 WHSALATSNGKLFTFG-DGRFGVLGHGN--RASVAYPKEVQLLSG--------YKAIKVA 426
Query: 321 CGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
CG H+ + D +L++WG G LG + P V
Sbjct: 427 CGVWHSAAIIDVMDLSGSKASAKRLFTWGDGDQYRLGHANKETYLEPTCV 476
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 86/191 (45%), Gaps = 33/191 (17%)
Query: 82 MMSLAIDNAGA--LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
+M L+ A A L+ WG+ D G + + P+ V + +VACG
Sbjct: 438 VMDLSGSKASAKRLFTWGDG---DQYRLGHANKETYLEPTCVAAVAEYNFHQVACGYTMT 494
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEV 195
VAL ++G + S G GQLG + + ++ R K++ F V E+
Sbjct: 495 VALTASGHVF--------SMGGTTYGQLGNPNSDGKVPILVRDKLVGEF-------VEEI 539
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
+CG+ H A+LT R S +T+G G NG+LGHG T P V+ L ++ +
Sbjct: 540 SCGANHVAVLTSR--------SELYTWGRGANGRLGHGDTDDKKSPTLVEALKDR-HVKN 590
Query: 256 VDCGLFHTSVV 266
+ CG TS +
Sbjct: 591 ISCGSTFTSCI 601
Score = 48.1 bits (113), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 46/94 (48%), Gaps = 11/94 (11%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V +++CG+ HV L S E Y+WG NG+LG GD + + P ++E
Sbjct: 533 GEFVEEISCGANHVAVLTSRSE--------LYTWGRGANGRLGHGDTDDKKSPTLVEALK 584
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V ++CGS T+ + K + + +S+C
Sbjct: 585 DRH---VKNISCGSTFTSCICLHKWVSGVDQSVC 615
>gi|357508731|ref|XP_003624654.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
gi|124359292|gb|ABD28429.2| Regulator of chromosome condensation/beta-lactamase-inhibitor
protein II [Medicago truncatula]
gi|355499669|gb|AES80872.1| Ankyrin repeat domain-containing protein [Medicago truncatula]
Length = 1099
Score = 81.6 bits (200), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 115/271 (42%), Gaps = 39/271 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHG-HTVV 130
+ A S+A+ + G ++ WG PD G + V TP V G V+
Sbjct: 206 ISAAKFHSVALTDRGEVYTWGFGRGGRLGHPDFDIHSGQAAV--ITPRQVISGLGSRRVM 263
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+A H V GE ++WG+N GQLG +++ P+ + T
Sbjct: 264 AIAAAKHHTVVATQGGE--------VFTWGSNREGQLGYTSVDTQPTPRRVSTLRS---- 311
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA--LVPEQVKELP 248
+ V + HTA+++ D+ E W G GQLG+GT+ SA P V+ L
Sbjct: 312 RIVAVAAANKHTAVIS------DLGEVFTW--GCNREGQLGYGTSNSASNYTPHVVESLK 363
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ L V +HT V+ S G+V++WG L +TRN P+
Sbjct: 364 GKI-LTRVSAAKYHTIVLGSDGEVFTWGHR--LVTPKRVVITRNLKKSGSIPLKF----- 415
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
H + V +A G AH++ +T+DG L+ W
Sbjct: 416 HRKERLHVVSIAAGMAHSMALTEDGA-LFYW 445
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 32/213 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG+ N QLG G+ + P +++ N + ++ FH+ LT R
Sbjct: 171 FSWGSGANYQLGTGNAHIQKLPCKVDSLNGS---IIKLISAAKFHSVALTDRGE------ 221
Query: 217 SMCWTFGLGENGQLGH-----GTTQSALV-PEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+T+G G G+LGH + Q+A++ P QV ++++ HT V + G
Sbjct: 222 --VYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVISGLGSRRVMAIAAAKHHTVVATQGG 279
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+V++WG + G S+ +S + V VA HT +++
Sbjct: 280 EVFTWGSNRE-GQLGYTSVDTQPTPRRVSTLR-----------SRIVAVAAANKHTAVIS 327
Query: 331 DDGYKLWSWGRGRSGVL--GTGKTIDFFAPAIV 361
D G ++++WG R G L GT + + P +V
Sbjct: 328 DLG-EVFTWGCNREGQLGYGTSNSASNYTPHVV 359
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 40/231 (17%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD------ 171
P V +G + ++ H VAL GE Y+WG G+LG D
Sbjct: 192 PCKVDSLNGSIIKLISAAKFHSVALTDRGE--------VYTWGFGRGGRLGHPDFDIHSG 243
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+ + + P+ + + V + HT + T +T+G GQLG
Sbjct: 244 QAAVITPR--QVISGLGSRRVMAIAAAKHHTVVATQ--------GGEVFTWGSNREGQLG 293
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASL 289
+ + + P +V L + V+V HT+V+S G+V++WG E LG
Sbjct: 294 YTSVDTQPTPRRVSTLRSRI--VAVAAANKHTAVISDLGEVFTWGCNREGQLGYG----- 346
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
T N A + ++ S G + +V+ HT+++ DG ++++WG
Sbjct: 347 TSNSASNYTPHVVESLKG------KILTRVSAAKYHTIVLGSDG-EVFTWG 390
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 70/144 (48%), Gaps = 11/144 (7%)
Query: 209 KRPN---DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+RP+ ++ + +++G G N QLG G +P +V L + + + FH+
Sbjct: 157 RRPDFGLSLVATELFSWGSGANYQLGTGNAHIQKLPCKVDSLNGSIIKL-ISAAKFHSVA 215
Query: 266 VSSAGDVWSWGMEKGLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
++ G+V++WG +G L P+ + +A +ISG G + + +A
Sbjct: 216 LTDRGEVYTWGFGRGGRLGHPDFDIHSGQAAVITPRQVISGLGS-----RRVMAIAAAKH 270
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLG 348
HTV+ T G ++++WG R G LG
Sbjct: 271 HTVVATQGG-EVFTWGSNREGQLG 293
>gi|67617767|ref|XP_667559.1| hect domain and RLD 2 [Cryptosporidium hominis TU502]
gi|54658712|gb|EAL37335.1| hect domain and RLD 2 [Cryptosporidium hominis]
Length = 1878
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 38/241 (15%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETF 184
GH+ + A H + A KG+ Y+WG N N LGLG P + F
Sbjct: 36 GHSFTRAASSLNHY--FIVAKLKNKGQ---LYAWGVNTNNVLGLGIENGEFNFPMKVNFF 90
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
S V++V+CG HTA+L + +T GLG+ G+LG+ + E
Sbjct: 91 ---SALEVFQVSCGYSHTAVLV---KGISEASGRVYTMGLGDRGRLGYTRGHTEFGNEHD 144
Query: 245 K---------------ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
K P + + CG H+ +S +G V++WG+ + L
Sbjct: 145 KNDLNESWYTPIPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQ------YGCL 198
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E D SP+ I GP + + +A GA H++ +DG ++++WG +G LGT
Sbjct: 199 GTGELNDVYSPVKIEA----GPTDKKVLHIAAGARHSLCCNEDG-QVFAWGSNSNGRLGT 253
Query: 350 G 350
G
Sbjct: 254 G 254
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 130/304 (42%), Gaps = 57/304 (18%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
G +S + G L+ + S+E G SLV S PS W +V ++ACG+ H
Sbjct: 449 GNKVSYEPKSEGGLFSVNRIYKSNGSSEIG-SLVGSQIPS--W-----SVRQIACGTSHT 500
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--PKIIETFNQDSPWAVYE--- 194
+ LV G ++WG N GQLG+ R + + K N+ + E
Sbjct: 501 LLLVYGG--------TIFAWGDNKYGQLGIDTRRRKSQDGDKNESFLNEPTEIKFSEPIR 552
Query: 195 -VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V CGS+H+ ++ C+++G G+ GQLG G ++ P + L + +
Sbjct: 553 RVACGSWHSLCCD--------IKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKNVIEV 604
Query: 254 VSVDCGLFHTSVVS------------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
+ L+ +V+ ++GD+W WG + L + GD +
Sbjct: 605 AGGE--LYSACIVACITTGNKDLDTINSGDLWIWG---------DGDLGKLGLGDHVLKS 653
Query: 302 LISGNGPHGPKFQDP-VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
I+ P P ++VA G++HT+ +T G +L +WG G G LGT T P
Sbjct: 654 CIA--APRHLNLGTPIIKVALGSSHTLALTASG-ELITWGAGYYGRLGTNSTKSHSNPIK 710
Query: 361 VLWP 364
+ +P
Sbjct: 711 IRFP 714
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 104/232 (44%), Gaps = 28/232 (12%)
Query: 56 APDSLEDDSKTNHKAPIK----ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
+ D +++S N IK I V G SL D G + WG D G +
Sbjct: 529 SQDGDKNESFLNEPTEIKFSEPIRRVACGSWHSLCCDIKGNCFSWGRG---DRGQLGTGA 585
Query: 112 LVSSFTPSPVWDFHGHTVVKVACG---SEHVVALVSAG----ETYKGEDLVCYSWGANNN 164
+ + + P+ + V++VA G S +VA ++ G +T DL + WG +
Sbjct: 586 IRNLYEPAGIVTLK--NVIEVAGGELYSACIVACITTGNKDLDTINSGDL--WIWGDGDL 641
Query: 165 GQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGL 224
G+LGLGD + N +P + +V GS HT LT E + W G
Sbjct: 642 GKLGLGDHVLKSCIAAPRHLNLGTP--IIKVALGSSHTLALTASG------ELITW--GA 691
Query: 225 GENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
G G+LG +T+S P +++ + V +V + G +H+ VSS GD+W WG
Sbjct: 692 GYYGRLGTNSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSMAVSSLGDLWVWG 743
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ ++G ++ WG + G L ++P VK+
Sbjct: 167 KISRISCGANHSLALSDSGLVFAWG---IGQYGCLGTGELNDVYSP-----------VKI 212
Query: 133 ACG-SEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQD 187
G ++ V ++AG + ED ++WG+N+NG+LG G + P I++ +Q
Sbjct: 213 EAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ- 271
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESM--CWTFGLGENGQLGHGTTQSALVPEQVK 245
+H L+ + + ++S +T+G G +G+LGHGT +P +++
Sbjct: 272 ------------YHITLVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIE 319
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ + V + G F++ +S +G+V+ WG ++
Sbjct: 320 GISSLPF-VQLTLGAFNSMALSQSGEVYIWGAKQ 352
Score = 47.8 bits (112), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 74/156 (47%), Gaps = 19/156 (12%)
Query: 220 WTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVV-----SSAGDVW 273
+ +G+ N LG G P +V + + V CG HT+V+ ++G V+
Sbjct: 62 YAWGVNTNNVLGLGIENGEFNFPMKVNFFSA-LEVFQVSCGYSHTAVLVKGISEASGRVY 120
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDA------ISPILISGNGPHGPKFQDPVQVACGAAH 325
+ G+ ++G LG + NE +PI N P K +++CGA H
Sbjct: 121 TMGLGDRGRLGYTRGHTEFGNEHDKNDLNESWYTPIPCIVNFPFNAKIS---RISCGANH 177
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ ++D G +++WG G+ G LGTG+ D ++P +
Sbjct: 178 SLALSDSGL-VFAWGIGQYGCLGTGELNDVYSPVKI 212
>gi|66809941|ref|XP_638694.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
gi|60467249|gb|EAL65282.1| inositol 5-phosphatase [Dictyostelium discoideum AX4]
Length = 1800
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 124/303 (40%), Gaps = 71/303 (23%)
Query: 8 YHYYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTN 67
+++ L T + F S+ GQLG IE + P ++ SK N
Sbjct: 83 FNHTLLLTSEYKIF----SMGFNQTGQLG-----------IENVVDSAVPLPVDTLSKFN 127
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD---- 123
+ +KAG +S AI AG L+ WG+ + + SFTP+ + +
Sbjct: 128 ------VIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIP 181
Query: 124 --------FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+ + G++H +A+ + G +SWG+N GQLGLG ++
Sbjct: 182 DAEKDDPIYQNLQYTNICFGAQHTIAISTTG--------AIFSWGSNQYGQLGLGHCNAK 233
Query: 176 LRPKIIETFNQDSPWA----------------------VYEVTCGSFHTALLTHRKRPND 213
L P I N A V ++ CG+FH+ALLT
Sbjct: 234 LVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLT------- 286
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
LE + +G + GQLG G + VP+ VK ++V + + G HT +++ DV+
Sbjct: 287 -LEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVF 345
Query: 274 SWG 276
++G
Sbjct: 346 TFG 348
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 92/231 (39%), Gaps = 56/231 (24%)
Query: 33 GQLGFSGSN----SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAID 88
GQLG N S P I L PD+ +DD + IC G ++AI
Sbjct: 156 GQLGNGKMNAKLHSFTPTTILNPLI---PDAEKDDPIYQNLQYTNIC---FGAQHTIAIS 209
Query: 89 NAGALWMWGN---------------CPLP---DSSTEGGFSLVSSFTPSPVWDFHGHT-- 128
GA++ WG+ P+P D+S E ++S DF T
Sbjct: 210 TTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIH 269
Query: 129 --VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE---T 183
VV +ACG+ H L G+ + WG+N GQLG GD + PK ++
Sbjct: 270 RIVVDIACGNFHSALLTLEGD--------LFLWGSNQYGQLGQGDSLDQSVPKTVKGSLE 321
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
F + + G+ HT LLT E +TFG E QLGHG+
Sbjct: 322 F-----VKINRMALGNNHTILLTK--------EQDVFTFGSNEFYQLGHGS 359
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V+CG HT LLT E ++ G + GQLG + VP V L ++
Sbjct: 76 VVSVSCGFNHTLLLTS--------EYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKF- 126
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + G ++ ++ AGD++ WG + G G NA L ++P LI
Sbjct: 127 NVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKM-NAKLHSFTPTTILNP-LIPDAE 184
Query: 308 PHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P +Q+ + GA HT+ ++ G ++SWG + G LG G
Sbjct: 185 KDDPIYQNLQYTNICFGAQHTIAISTTG-AIFSWGSNQYGQLGLG 228
>gi|229442455|gb|AAI72910.1| guanine nucleotide exchange factor p532 [synthetic construct]
Length = 2441
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 1674 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 1730
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 1731 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 1779
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 1780 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 1831
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 1832 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 1880
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 1881 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 1917
Score = 47.0 bits (110), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 1819 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 1872
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 1873 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 1924
Query: 189 PWAVYEVTCGSFHTALLTHRKRP 211
V +++ G H+A T P
Sbjct: 1925 ---VRQISAGRCHSAAWTAPPVP 1944
>gi|222528951|ref|YP_002572833.1| chromosome condensation regulator RCC1 [Caldicellulosiruptor bescii
DSM 6725]
gi|222455798|gb|ACM60060.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
bescii DSM 6725]
Length = 743
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S+ AG SLA+ G +W WG+ L + FS P + G VVKVA
Sbjct: 547 VRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKKKYLNFSE----KPVKIKGLSG--VVKVA 600
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +D +SWG N GQLG G RE+ P ++ N V
Sbjct: 601 AGKYHSLAL--------KKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNN-----VV 647
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G +H+ L + W +G GQLG + + VP +V++L +
Sbjct: 648 AIAAGDYHSMALKK--------DGTVWVWGSNIRGQLGRRNIEFSTVPLKVEKLDN---V 696
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGME 278
V++ G H+ + G VW WG+E
Sbjct: 697 VAIAAGDTHSVALKKDGTVWVWGIE 721
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 110/265 (41%), Gaps = 48/265 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
K+ ++ AG S+A+ + G +W+WG+ L + E F LV V
Sbjct: 293 KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLK--------NV 344
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDS 188
V VA G H VAL G ++WG N GQLG + L P ++ +
Sbjct: 345 VAVAAGRLHSVALTKNG--------TIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN-- 394
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + G HT + KR + W++G GQLG+GT +S+ +P VK L
Sbjct: 395 ---VVAIATGGSHTLAI---KR-----DGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLN 443
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V V+ G H+ V G VW WG + + + D +SP+ I
Sbjct: 444 NAVL---VEAGSQHSLAVDKDGTVWVWGFIESV-------WSEKNTKDILSPLPIKIG-- 491
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDG 333
K D ++A G + +++ DG
Sbjct: 492 ---KLNDITEIAGGLDYILVLRKDG 513
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 134/327 (40%), Gaps = 60/327 (18%)
Query: 47 VIEQFLTI---GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPD 103
+I FL++ A +++SK K+ S AG + +LAI + G +W WG
Sbjct: 14 LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWG------ 67
Query: 104 SSTEGGFSLVSSFTPS----PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSW 159
GF + + T PV VV V+ G+ H +AL G + W
Sbjct: 68 ---YNGFGQLGNGTYKDSCIPVRVKGLKDVVAVSAGTFHSLALKKDGS--------VWIW 116
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESM 218
G N GQ R+S + + + G F A+ + +
Sbjct: 117 GHTNYGQ-----RKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGS---------DGS 162
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM- 277
W +G+ +G+LG G+ + + VP +VK L +V+V GL+H+ + G VWSWG
Sbjct: 163 VWAWGINNHGELGIGSLKPSAVPVKVKGLKD---VVAVSAGLYHSLALKRDGTVWSWGYN 219
Query: 278 EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
E G LG P T + P+ + G D + ++ G H++ + DG +
Sbjct: 220 EDGELGNRPTEDYTVS------VPVRVKG-------LSDVIAISAGGFHSIALNKDG-AV 265
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIVLW 363
W WG G + GK + + P + W
Sbjct: 266 WIWGGGI--IEKNGKIDNSYIPVRIRW 290
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/287 (25%), Positives = 112/287 (39%), Gaps = 49/287 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
+ ++ AGG S+A++ GA+W+WG + E + +S+ P + W + VV +
Sbjct: 246 VIAISAGGFHSIALNKDGAVWIWGGGII-----EKNGKIDNSYIPVRIRWL---NKVVAI 297
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G H +AL +D + WG N+ G LG E ++ V
Sbjct: 298 AAGYRHSIAL--------KDDGTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLKN-----V 344
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYV 251
V G H+ LT W +G GQLG +L +P +VK L
Sbjct: 345 VAVAAGRLHSVALTK--------NGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN-- 394
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V++ G HT + G VWSWG L + P + G
Sbjct: 395 -VVAIATGGSHTLAIKRDGTVWSWGANN------KGQLGNGTYKSSYIPTCVKG------ 441
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ V V G+ H++ V DG +W WG S V T D +P
Sbjct: 442 -LNNAVLVEAGSQHSLAVDKDG-TVWVWGFIES-VWSEKNTKDILSP 485
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/327 (25%), Positives = 121/327 (37%), Gaps = 69/327 (21%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG-FSLVSSFTPSPVWDFHGHTVVKV 132
+ +V AG + S+A+ G +W WGN E FSL + + VV +
Sbjct: 344 VVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL-----DNVVAI 398
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ------ 186
A G H +A+ D +SWGANN GQLG G +S P ++ N
Sbjct: 399 ATGGSHTLAI--------KRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNNAVLVEA 450
Query: 187 --------------------DSPWAVYEVTCGSFHTALLTHRKRPNDMLE---SMCWTFG 223
+S W+ E + L + ND+ E + +
Sbjct: 451 GSQHSLAVDKDGTVWVWGFIESVWS--EKNTKDILSPLPIKIGKLNDITEIAGGLDYILV 508
Query: 224 LGENGQL-GHG--------TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L ++G + G G T S ++ L + S+ G FH+ V + G VWS
Sbjct: 509 LRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWS 568
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG N + + P+ I G V+VA G H++ + DG
Sbjct: 569 WG-------DTNLDNKKKYLNFSEKPVKIKG-------LSGVVKVAAGKYHSLALKKDG- 613
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+WSWG G LG G F P V
Sbjct: 614 TVWSWGYNAYGQLGNGTRETSFVPVRV 640
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 115/293 (39%), Gaps = 52/293 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS-PVWDFHGHTVVKV 132
+ +V AG SLA+ G +W WG + E G +T S PV V+ +
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWG----YNEDGELGNRPTEDYTVSVPVRVKGLSDVIAI 249
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGAN---NNGQLGLGDRESRLRPKIIETFNQDSP 189
+ G H +AL +D + WG NG++ ++ P I N+
Sbjct: 250 SAGGFHSIAL--------NKDGAVWIWGGGIIEKNGKI-----DNSYIPVRIRWLNK--- 293
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + G H+ L + W +G G LG + + + QVK L
Sbjct: 294 --VVAIAAGYRHSIALKD--------DGTVWVWGHNSYGVLGSNVGEHSFLLVQVKGLKN 343
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+V+V G H+ ++ G +W+WG NA ++ S N P+
Sbjct: 344 ---VVAVAAGRLHSVALTKNGTIWAWG--------NNAFGQLGRENNSFSL-----NLPY 387
Query: 310 GPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K+ D V +A G +HT+ + DG +WSWG G LG G + P V
Sbjct: 388 KVKWLDNVVAIATGGSHTLAIKRDG-TVWSWGANNKGQLGNGTYKSSYIPTCV 439
Score = 62.0 bits (149), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/315 (24%), Positives = 119/315 (37%), Gaps = 94/315 (29%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNC--------------PLP------DSSTE--GGFSLV- 113
V+AG SLA+D G +W+WG PLP + TE GG +
Sbjct: 448 VEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGLDYIL 507
Query: 114 -----------------SSFTPSPVWDF-------HGHTVVKVACGSEHVVALVSAGETY 149
FT S V + V +A G H +A+ + G
Sbjct: 508 VLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDG--- 564
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEVTCGSFHTALL 205
+SWG N L +++ L +P I+ + V +V G +H+ L
Sbjct: 565 -----TVWSWGDTN-----LDNKKKYLNFSEKPVKIKGLS-----GVVKVAAGKYHSLAL 609
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+ W++G GQLG+GT +++ VP +VK L +V++ G +H+
Sbjct: 610 KK--------DGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNN---VVAIAAGDYHSMA 658
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
+ G VW WG L R + P+ + K + V +A G H
Sbjct: 659 LKKDGTVWVWGSN------IRGQLGRRNIEFSTVPLKV-------EKLDNVVAIAAGDTH 705
Query: 326 TVLVTDDGYKLWSWG 340
+V + DG +W WG
Sbjct: 706 SVALKKDG-TVWVWG 719
>gi|431913810|gb|ELK15239.1| RCC1 and BTB domain-containing protein 1 [Pteropus alecto]
Length = 531
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKKVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + P ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLNPVHIM 280
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 83/311 (26%), Positives = 130/311 (41%), Gaps = 50/311 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEV--------FAWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKKVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + ++P+ I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN------TYGQLGTGNKNNLLNPVHIM---- 280
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++ AC +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTSFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEE 369
V W L+ E
Sbjct: 339 PAVSWRLLSVE 349
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FG+ + LG G +QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGMNYSNCLGTGDSQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|76678806|ref|XP_586049.2| PREDICTED: RCC1 and BTB domain-containing protein 1-like, partial
[Bos taurus]
Length = 425
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 22/208 (10%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
V Y+WG N QLG G L P I+ V EV CGS H+ L
Sbjct: 2 VVYAWGHNGYSQLGNGTTNQGLAP--IQVCTNLLIKQVVEVACGSHHSMALA-------- 51
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ + +G GQ+G G+T + P +V +V + CG + V G+V+
Sbjct: 52 ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGEVYG 111
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD+G
Sbjct: 112 WGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTDEGL 160
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
L++WG G LGTG + +PA ++
Sbjct: 161 -LYAWGANTYGQLGTGNKNNLLSPAHIM 187
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 120/294 (40%), Gaps = 49/294 (16%)
Query: 91 GALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G ++ WG+ L + +T G + + T + VV+VACGS H +AL + GE
Sbjct: 1 GVVYAWGHNGYSQLGNGTTNQGLAPIQVCTNLLI-----KQVVEVACGSHHSMALAADGE 55
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
++WG NN GQ+G G ++ P+ + N V + CG + +
Sbjct: 56 V--------FAWGYNNCGQVGSGSTANQPTPRKVT--NCLHIKRVVGIACGQTSSMAVL- 104
Query: 208 RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
D E W G NGQLG G + L P +V L V + + CG HT ++
Sbjct: 105 -----DNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL-HSVCVNQIVCGYAHTLALT 156
Query: 268 SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV-ACGAAHT 326
G +++WG L + +SP I + + +++ AC +AHT
Sbjct: 157 DEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM------VEKERVIEIAACHSAHT 204
Query: 327 VLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPAIVLWPPLTEEFK 371
G ++ WG RG+S L T FA V W L+ E +
Sbjct: 205 SAAKTQGGHVYMWGQCRGQSVTLPHLTHLSSTDDVFACFATPAVTWRLLSVEHE 258
>gi|145536544|ref|XP_001453994.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124421738|emb|CAK86597.1| unnamed protein product [Paramecium tetraurelia]
Length = 229
Score = 81.6 bits (200), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 41/214 (19%)
Query: 161 ANNNGQLGLGDRESRLR----PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
A+N GQLGLG + PKI +V+CG HTALLT
Sbjct: 13 ADNEGQLGLGKNRGSSQYYHIPKICHY-----KIGFIQVSCGKDHTALLTQNGHV----- 62
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G E+ +LGH QS P+++++L + ++ V CG HT+ V+S G +++WG
Sbjct: 63 ---YTMGCNEHNKLGHANKQSLYAPQRIEQLNK---VIQVSCGSTHTACVTSDGSLFTWG 116
Query: 277 MEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
LG+ N +L R +S + + +QV+CG HT+++T D
Sbjct: 117 DNSCGQLGVKQNGNLNR------VSTL------------TNCIQVSCGNKHTLVLT-DAQ 157
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
+ + +G LG + F P + P L +
Sbjct: 158 ECFGFGLNDDSQLGISRLKTVFEPTKIKLPSLQQ 191
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/204 (25%), Positives = 84/204 (41%), Gaps = 41/204 (20%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
++V+CG +H L G Y + G N + +LG +++S P+ IE N+
Sbjct: 44 IQVSCGKDHTALLTQNGHVY--------TMGCNEHNKLGHANKQSLYAPQRIEQLNK--- 92
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V +V+CGS HTA +T ++ C G+ +NG L +T +
Sbjct: 93 --VIQVSCGSTHTACVTSDGSLFTWGDNSCGQLGVKQNGNLNRVSTLTN----------- 139
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V CG HT V++ A + + G GL ++ L + P I
Sbjct: 140 ---CIQVSCGNKHTLVLTDAQECF------GFGLNDDSQLGISRLKTVFEPTKI------ 184
Query: 310 GPKFQDPVQVACGAAHTVLVTDDG 333
K QV+ G +V +T DG
Sbjct: 185 --KLPSLQQVSAGNLFSVFLTQDG 206
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S + P + + V++V+CGS H + S G ++WG N+ GQLG+
Sbjct: 80 SLYAPQRIEQLN--KVIQVSCGSTHTACVTSDGSL--------FTWGDNSCGQLGVKQNG 129
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ R + +V+CG+ HT +LT + C+ FGL ++ QLG
Sbjct: 130 NLNRVSTLTN--------CIQVSCGNKHTLVLTDAQE--------CFGFGLNDDSQLGIS 173
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
++ P ++K LP L V G + ++ G V+ G+
Sbjct: 174 RLKTVFEPTKIK-LPS---LQQVSAGNLFSVFLTQDGIVYICGL 213
Score = 43.9 bits (102), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 26/137 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN--CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
K+ V G + + + G+L+ WG+ C G + VS+ T +
Sbjct: 92 KVIQVSCGSTHTACVTSDGSLFTWGDNSCGQLGVKQNGNLNRVSTLT----------NCI 141
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+CG++H + L A E C+ +G N++ QLG+ ++ P I+ P
Sbjct: 142 QVSCGNKHTLVLTDAQE--------CFGFGLNDDSQLGISRLKTVFEPTKIKL-----P- 187
Query: 191 AVYEVTCGSFHTALLTH 207
++ +V+ G+ + LT
Sbjct: 188 SLQQVSAGNLFSVFLTQ 204
>gi|312622781|ref|YP_004024394.1| regulator of chromosome condensation rcc1 [Caldicellulosiruptor
kronotskyensis 2002]
gi|312203248|gb|ADQ46575.1| regulator of chromosome condensation RCC1 [Caldicellulosiruptor
kronotskyensis 2002]
Length = 743
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 90/205 (43%), Gaps = 30/205 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S+ AG SLA+ G +W WG+ L + FS P + G VVKVA
Sbjct: 547 VRSIAAGYFHSLAVRTDGTVWSWGDTNLDNKEKYLNFSE----KPVKIKGLSG--VVKVA 600
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +AL +D +SWG N GQLG G RE+ P ++ N V
Sbjct: 601 AGKYHSLAL--------KKDGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNN-----VV 647
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+ G +H+ L + W +G GQLG + + VP +V++L +
Sbjct: 648 AIAAGDYHSMALKK--------DGTVWVWGSNIRGQLGRRNIEFSTVPLKVEKLDN---V 696
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGME 278
V++ G H+ + G VW WG+E
Sbjct: 697 VAIAAGDTHSVALKKDGTVWVWGIE 721
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 111/262 (42%), Gaps = 42/262 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ ++ AG S+A+ + G +W+WG+ + G SF P V VV V
Sbjct: 293 KVVAIAAGYRHSIALKDDGTVWVWGHNSYGVLGSNVG---EHSFLPVQVKGL--KNVVAV 347
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWA 191
A G H VAL G ++WG N GQLG + L P ++ +
Sbjct: 348 AAGRLHSVALTKNG--------TIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN----- 394
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V + G HT + KR + W++G GQLG+GT +S+ +P VK L + V
Sbjct: 395 VVAIAAGGSHTLAI---KR-----DGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAV 446
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V+ G H+ V G VW WG + + + D +SP+ I
Sbjct: 447 L---VEAGSQHSLAVDKDGTVWVWGFIESV-------WSEKNTKDILSPLPIKIG----- 491
Query: 312 KFQDPVQVACGAAHTVLVTDDG 333
K D ++A G + +++ DG
Sbjct: 492 KLNDITEIAGGLDYILVLRKDG 513
Score = 72.8 bits (177), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 112/287 (39%), Gaps = 49/287 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKV 132
+ ++ AGG S+A++ GA+W+WG + E + +S+ P + W + VV +
Sbjct: 246 VIAISAGGFHSIALNKDGAVWIWGGGII-----EKNGKIDNSYIPVRIRWL---NKVVAI 297
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G H +AL +D + WG N+ G LG E P ++ V
Sbjct: 298 AAGYRHSIAL--------KDDGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLKN-----V 344
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYV 251
V G H+ LT W +G GQLG +L +P +VK L
Sbjct: 345 VAVAAGRLHSVALTK--------NGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWLDN-- 394
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V++ G HT + G VWSWG L + P + G
Sbjct: 395 -VVAIAAGGSHTLAIKRDGTVWSWGANN------KGQLGNGTYKSSYIPTCVKG------ 441
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
V V G+ H++ V DG +W WG S V T D +P
Sbjct: 442 -LNKAVLVEAGSQHSLAVDKDG-TVWVWGFIES-VWSEKNTKDILSP 485
Score = 71.6 bits (174), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/327 (25%), Positives = 134/327 (40%), Gaps = 60/327 (18%)
Query: 47 VIEQFLTI---GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPD 103
+I FL++ A +++SK K+ S AG + +LAI + G +W WG
Sbjct: 14 LIFSFLSMTLSNANSKNKENSKELQGENFKVISSGAGSLHTLAIKDDGTVWAWG------ 67
Query: 104 SSTEGGFSLVSSFTPS----PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSW 159
GF + + T PV VV V+ G+ H +AL G + W
Sbjct: 68 ---YNGFGQLGNGTYKDSCIPVRVKGLKDVVAVSAGTFHSLALKKDGS--------VWIW 116
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESM 218
G N GQ R+S + + + G F A+ + +
Sbjct: 117 GHTNYGQ-----RKSDVYRDFTTPVKVKELKNIVAIAAGWDFSLAVGS---------DGS 162
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM- 277
W +G+ +G+LG G+ + + VP +VK L +V+V GL+H+ + G VWSWG
Sbjct: 163 VWAWGINNHGELGIGSLKPSAVPVKVKGLKD---VVAVSAGLYHSLALKRDGTVWSWGYN 219
Query: 278 EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
E G LG P T + P+ + G D + ++ G H++ + DG +
Sbjct: 220 EDGELGNRPTEDYTVS------VPVRVKG-------LSDVIAISAGGFHSIALNKDG-AV 265
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIVLW 363
W WG G + GK + + P + W
Sbjct: 266 WIWGGGI--IEKNGKIDNSYIPVRIRW 290
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/329 (25%), Positives = 124/329 (37%), Gaps = 73/329 (22%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG-FSLVSSFTPSPVWDFHGHTVVKV 132
+ +V AG + S+A+ G +W WGN E FSL + + VV +
Sbjct: 344 VVAVAAGRLHSVALTKNGTIWAWGNNAFGQLGRENNSFSLNLPYKVKWL-----DNVVAI 398
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ------ 186
A G H +A+ D +SWGANN GQLG G +S P ++ N+
Sbjct: 399 AAGGSHTLAI--------KRDGTVWSWGANNKGQLGNGTYKSSYIPTCVKGLNKAVLVEA 450
Query: 187 --------------------DSPWAVYEVTCGSFHTALLTHRKRPNDMLE---SMCWTFG 223
+S W+ E + L + ND+ E + +
Sbjct: 451 GSQHSLAVDKDGTVWVWGFIESVWS--EKNTKDILSPLPIKIGKLNDITEIAGGLDYILV 508
Query: 224 LGENGQL-GHG--------TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
L ++G + G G T S ++ L + S+ G FH+ V + G VWS
Sbjct: 509 LRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTDGTVWS 568
Query: 275 WGMEKGLGLCPNASLTRNEAGDAIS--PILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
WG + +L E S P+ I G V+VA G H++ + D
Sbjct: 569 WG---------DTNLDNKEKYLNFSEKPVKIKG-------LSGVVKVAAGKYHSLALKKD 612
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +WSWG G LG G F P V
Sbjct: 613 G-TVWSWGYNAYGQLGNGTRETSFVPVRV 640
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 116/293 (39%), Gaps = 52/293 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS-PVWDFHGHTVVKV 132
+ +V AG SLA+ G +W WG + E G +T S PV V+ +
Sbjct: 194 VVAVSAGLYHSLALKRDGTVWSWG----YNEDGELGNRPTEDYTVSVPVRVKGLSDVIAI 249
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGAN---NNGQLGLGDRESRLRPKIIETFNQDSP 189
+ G H +AL +D + WG NG++ ++ P I N+
Sbjct: 250 SAGGFHSIAL--------NKDGAVWIWGGGIIEKNGKI-----DNSYIPVRIRWLNK--- 293
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V + G H+ L + W +G G LG + + +P QVK L
Sbjct: 294 --VVAIAAGYRHSIALKD--------DGTVWVWGHNSYGVLGSNVGEHSFLPVQVKGLKN 343
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+V+V G H+ ++ G +W+WG NA ++ S N P+
Sbjct: 344 ---VVAVAAGRLHSVALTKNGTIWAWG--------NNAFGQLGRENNSFSL-----NLPY 387
Query: 310 GPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K+ D V +A G +HT+ + DG +WSWG G LG G + P V
Sbjct: 388 KVKWLDNVVAIAAGGSHTLAIKRDG-TVWSWGANNKGQLGNGTYKSSYIPTCV 439
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 78/319 (24%), Positives = 120/319 (37%), Gaps = 94/319 (29%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNC--------------PLP------DSSTE--GGF 110
K V+AG SLA+D G +W+WG PLP + TE GG
Sbjct: 444 KAVLVEAGSQHSLAVDKDGTVWVWGFIESVWSEKNTKDILSPLPIKIGKLNDITEIAGGL 503
Query: 111 SLV------------------SSFTPSPVWDF-------HGHTVVKVACGSEHVVALVSA 145
+ FT S V + V +A G H +A+ +
Sbjct: 504 DYILVLRKDGNIWGCGNDFYFRKFTDSSVSSVTKLIRLDNIKNVRSIAAGYFHSLAVRTD 563
Query: 146 GETYKGEDLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEVTCGSFH 201
G +SWG N L ++E L +P I+ + V +V G +H
Sbjct: 564 G--------TVWSWGDTN-----LDNKEKYLNFSEKPVKIKGLS-----GVVKVAAGKYH 605
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
+ L + W++G GQLG+GT +++ VP +VK L +V++ G +
Sbjct: 606 SLALKK--------DGTVWSWGYNAYGQLGNGTRETSFVPVRVKGLNN---VVAIAAGDY 654
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
H+ + G VW WG L R + P+ + K + V +A
Sbjct: 655 HSMALKKDGTVWVWGSN------IRGQLGRRNIEFSTVPLKV-------EKLDNVVAIAA 701
Query: 322 GAAHTVLVTDDGYKLWSWG 340
G H+V + DG +W WG
Sbjct: 702 GDTHSVALKKDG-TVWVWG 719
>gi|27085405|gb|AAN85438.1| inositol 5-phosphatase 2 [Dictyostelium discoideum]
Length = 1800
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 124/303 (40%), Gaps = 71/303 (23%)
Query: 8 YHYYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTN 67
+++ L T + F S+ GQLG IE + P ++ SK N
Sbjct: 83 FNHTLLLTSEYKIF----SMGFNQTGQLG-----------IENVVDSAVPLPVDTLSKFN 127
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD---- 123
+ +KAG +S AI AG L+ WG+ + + SFTP+ + +
Sbjct: 128 ------VIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKMNAKLHSFTPTTILNPLIP 181
Query: 124 --------FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+ + G++H +A+ + G +SWG+N GQLGLG ++
Sbjct: 182 DAEKDDPIYQNLQYTNICFGAQHTIAISTTG--------AIFSWGSNQYGQLGLGHCNAK 233
Query: 176 LRPKIIETFNQDSPWA----------------------VYEVTCGSFHTALLTHRKRPND 213
L P I N A V ++ CG+FH+ALLT
Sbjct: 234 LVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIHRIVVDIACGNFHSALLT------- 286
Query: 214 MLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
LE + +G + GQLG G + VP+ VK ++V + + G HT +++ DV+
Sbjct: 287 -LEGDLFLWGSNQYGQLGQGDSLDQSVPKTVKGSLEFVKINRMALGNNHTILLTKEQDVF 345
Query: 274 SWG 276
++G
Sbjct: 346 TFG 348
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/231 (29%), Positives = 92/231 (39%), Gaps = 56/231 (24%)
Query: 33 GQLGFSGSN----SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAID 88
GQLG N S P I L PD+ +DD + IC G ++AI
Sbjct: 156 GQLGNGKMNAKLHSFTPTTILNPLI---PDAEKDDPIYQNLQYTNIC---FGAQHTIAIS 209
Query: 89 NAGALWMWGN---------------CPLP---DSSTEGGFSLVSSFTPSPVWDFHGHT-- 128
GA++ WG+ P+P D+S E ++S DF T
Sbjct: 210 TTGAIFSWGSNQYGQLGLGHCNAKLVPVPIHLDNSFERRAGHINSLGEIVTTDFTAKTIH 269
Query: 129 --VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE---T 183
VV +ACG+ H L G+ + WG+N GQLG GD + PK ++
Sbjct: 270 RIVVDIACGNFHSALLTLEGD--------LFLWGSNQYGQLGQGDSLDQSVPKTVKGSLE 321
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
F + + G+ HT LLT E +TFG E QLGHG+
Sbjct: 322 F-----VKINRMALGNNHTILLTK--------EQDVFTFGSNEFYQLGHGS 359
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 18/165 (10%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V+CG HT LLT E ++ G + GQLG + VP V L ++
Sbjct: 76 VVSVSCGFNHTLLLTS--------EYKIFSMGFNQTGQLGIENVVDSAVPLPVDTLSKF- 126
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNG 307
++ + G ++ ++ AGD++ WG + G G NA L ++P LI
Sbjct: 127 NVIKIKAGNNVSAAITEAGDLYCWGSSAYGQLGNGKM-NAKLHSFTPTTILNP-LIPDAE 184
Query: 308 PHGPKFQDP--VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P +Q+ + GA HT+ ++ G ++SWG + G LG G
Sbjct: 185 KDDPIYQNLQYTNICFGAQHTIAISTTG-AIFSWGSNQYGQLGLG 228
>gi|15229409|ref|NP_188968.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
gi|332643224|gb|AEE76745.1| regulator of chromosome condensation-like protein with FYVE zinc
finger domain [Arabidopsis thaliana]
Length = 1045
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + + +G L+ WG+ + + G S +S + P V G V+ VACG
Sbjct: 308 VACGEYHTCVVSTSGDLFSWGDG-IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 366
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H + G+ +++G G LG G+RES PK +++ N +V
Sbjct: 367 TWHSALATANGK--------LFTFGDGAFGVLGHGNRESVSYPKEVQSLNG---LKTVKV 415
Query: 196 TCGSFHTALLTHR--KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
C +HTA + + M +T+G G+ +LGHG ++ L+P V L Y +
Sbjct: 416 ACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH 475
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ CG T ++++G V++ G LG N D P L+
Sbjct: 476 -KIACGHTFTVALTTSGHVFTMGGTAHGQLG---------NSISDGKLPCLV-------- 517
Query: 312 KFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + ++ACGA H ++T ++++WG+G +G LG G T D P +V
Sbjct: 518 --QDRLVGEFVEEIACGAHHVAVLTSRS-EVFTWGKGANGRLGHGDTEDKRTPTLV 570
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 41/295 (13%)
Query: 80 GGMMSLAIDNAGALWMWGNC----PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
GG I++ G +++WG LPD + TP P+ V ++ CG
Sbjct: 200 GGSGPDDIESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCG 259
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
HV + GE + +WG G+LG G + RPK++E + + V
Sbjct: 260 VRHVALVTRQGEVF--------TWGEEVGGRLGHGIQVDISRPKLVEFLALTN---IDFV 308
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CG +HT +++ D+ W G+ G LGHG+ S +P++V + + ++S
Sbjct: 309 ACGEYHTCVVS---TSGDLFS---WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLS 362
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V CG +H+++ ++ G ++++G + G+ + N + + S NG
Sbjct: 363 VACGTWHSALATANGKLFTFG-DGAFGVLGHG----NRESVSYPKEVQSLNG------LK 411
Query: 316 PVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V+VAC HT + + KL++WG G LG G + P V
Sbjct: 412 TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCV 466
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 82/178 (46%), Gaps = 31/178 (17%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D + G + + P+ V + K+ACG VAL ++G +
Sbjct: 441 LFTWGDG---DKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVF--- 494
Query: 153 DLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ G +GQLG + +L + +++ F V E+ CG+ H A+LT R
Sbjct: 495 -----TMGGTAHGQLGNSISDGKLPCLVQDRLVGEF-------VEEIACGAHHVAVLTSR 542
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NG+LGHG T+ P V+ L + ++ S+ CG TS +
Sbjct: 543 --------SEVFTWGKGANGRLGHGDTEDKRTPTLVEAL-RDRHVKSLSCGSNFTSSI 591
>gi|417411454|gb|JAA52162.1| Putative alpha-tubulin suppressor, partial [Desmodus rotundus]
Length = 534
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 99 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSVALA----- 151
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 152 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 208
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L + ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 209 VYGWGYNG------NGQLGLGNNVNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 257
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 258 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 287
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 84/311 (27%), Positives = 130/311 (41%), Gaps = 50/311 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 83 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 136
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H VAL + GE ++WG NN GQ+G G ++ P+ + N
Sbjct: 137 VVEVACGSHHSVALAADGEV--------FAWGYNNCGQVGSGSTANQPTPRKVT--NCLH 186
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G + L P +V L
Sbjct: 187 IKRVVGIACGQTSSMAVL------DNGEVYGW--GYNGNGQLGLGNNVNQLTPVRVAAL- 237
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 238 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 287
Query: 309 HGPKFQDPVQV-ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++ AC +AHT G ++ WG RG+S +L T FA
Sbjct: 288 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHLSCTDDVFACFAT 345
Query: 359 AIVLWPPLTEE 369
V W L+ E
Sbjct: 346 PAVSWRLLSVE 356
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS L+P++++ L + + +S G H + + G V++WG
Sbjct: 51 FVFGLNYSNCLGTGDNQSTLIPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 109
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H+V + DG ++++
Sbjct: 110 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSVALAADG-EVFA 158
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 159 WGYNNCGQVGSGSTANQPTPRKV 181
>gi|307168816|gb|EFN61765.1| RCC1 and BTB domain-containing protein 1 [Camponotus floridanus]
Length = 538
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 109/256 (42%), Gaps = 40/256 (15%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + + ACGS HV+AL GE Y SWG N+ +LG G
Sbjct: 63 STLYPKKIEVLCDKDIKTFACGSGPHVLALTEKGEVY--------SWGHNSYCELGNGTC 114
Query: 173 ESRLRPKIIETFNQDSPW---AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
L P ++ + + +V CGS H+ LT E + +G GQ
Sbjct: 115 NQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLALTE--------EGEVYAWGQNNCGQ 166
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCP 285
+G + + P QV +V + CG + VV+ G+V+ WG + G+G
Sbjct: 167 VGSNISTNQGSPRQVTSNLAGKKIVHISCGQTSSMVVTDNGEVYGWGYNGVGQLGIGNYV 226
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N +T + G I ++I +VACG AHT+ ++D+G KL+ WG G
Sbjct: 227 N-QMTPSRVGSLIGVVII--------------KVACGYAHTLALSDEG-KLYVWGGNSYG 270
Query: 346 VLGTGKTIDFFAPAIV 361
LG G + P +V
Sbjct: 271 QLGIGNKTNACNPVLV 286
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 88/197 (44%), Gaps = 26/197 (13%)
Query: 85 LAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVA 141
LA+ G ++ WG+ C L + + G + + P+ + +V VACGS H +A
Sbjct: 90 LALTEKGEVYSWGHNSYCELGNGTCNQGLTPILVNIPTLGAGLNMKCIVDVACGSHHSLA 149
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
L GE Y+WG NN GQ+G ++ P+ + + + + ++CG
Sbjct: 150 LTEEGEV--------YAWGQNNCGQVGSNISTNQGSPR--QVTSNLAGKKIVHISCGQTS 199
Query: 202 TALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCG 259
+ ++T +G G N GQLG G + + P +V L V ++ V CG
Sbjct: 200 SMVVTDNGE----------VYGWGYNGVGQLGIGNYVNQMTPSRVGSLIG-VVIIKVACG 248
Query: 260 LFHTSVVSSAGDVWSWG 276
HT +S G ++ WG
Sbjct: 249 YAHTLALSDEGKLYVWG 265
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 11/116 (9%)
Query: 66 TNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
T++ A KI + G S+ + + G ++ WG G + V+ TPS V
Sbjct: 182 TSNLAGKKIVHISCGQTSSMVVTDNGEVYGWG---YNGVGQLGIGNYVNQMTPSRVGSLI 238
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
G ++KVACG H +AL G+ Y WG N+ GQLG+G++ + P ++
Sbjct: 239 GVVIIKVACGYAHTLALSDEGKL--------YVWGGNSYGQLGIGNKTNACNPVLV 286
Score = 55.1 bits (131), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 87/216 (40%), Gaps = 39/216 (18%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSP---VWDFHGHT 128
I V G SLA+ G ++ WG NC S+ +S+ SP + G
Sbjct: 137 IVDVACGSHHSLALTEEGEVYAWGQNNCGQVGSN-------ISTNQGSPRQVTSNLAGKK 189
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+V ++CG + + GE Y WG N GQLG+G+ +++ P + +
Sbjct: 190 IVHISCGQTSSMVVTDNGEV--------YGWGYNGVGQLGIGNYVNQMTPSRVGSL---I 238
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ +V CG HT L+ E + +G GQLG G +A P V
Sbjct: 239 GVVIIKVACGYAHTLALSD--------EGKLYVWGGNSYGQLGIGNKTNACNPVLVTHEM 290
Query: 249 QYVYLVSVDCGLFHTSVVSSA----GDVWSWGMEKG 280
+ D H + +S+A G V+ WG +G
Sbjct: 291 GRI----SDIAALHYNHISTAVGVGGRVYMWGNCRG 322
>gi|330837469|ref|YP_004412110.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
17374]
gi|329749372|gb|AEC02728.1| cell wall/surface repeat protein [Sphaerochaeta coccoides DSM
17374]
Length = 874
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/308 (28%), Positives = 122/308 (39%), Gaps = 42/308 (13%)
Query: 65 KTNHKAPIKI----CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---- 116
TN P+K+ +V AG ++ + G LW GN G L S
Sbjct: 542 NTNINTPVKVMTDVAAVSAGYYHTMIVKENGTLWATGNNQY------GQLGLASILGTDK 595
Query: 117 -TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
TP V G V V+ GS H + L +D ++ G NN GQLG G +S+
Sbjct: 596 NTPVKVTSM-GAAVKAVSAGSYHTMIL--------KKDGTLWATGRNNYGQLGDGTTDSK 646
Query: 176 LRPKIIE--TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ T D V V+ G +HT +L + W G E GQLG G
Sbjct: 647 GMPVQVKASTTPNDFMTDVEAVSTGVYHTMILKK--------DGTLWATGYNEYGQLGDG 698
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T+ P QV + V VS G HT ++ G +W+ G L + S T
Sbjct: 699 TSNDRSTPVQVLSMGADVAAVS--AGENHTMILKKDGTLWATGQNTYGQLGDSDSGTNKN 756
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+P+ + + D V+ G HT+++ DG LW+ GR G LG G
Sbjct: 757 -----TPVQVKDDTDISGFMTDVAAVSAGYGHTMILKMDG-TLWAIGRNEYGQLGVGNHN 810
Query: 354 DFFAPAIV 361
D P V
Sbjct: 811 DTSTPVQV 818
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 74/184 (40%), Gaps = 28/184 (15%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V+ SFHT LL ++ W G + QLG G + P +V
Sbjct: 507 VKSVSFKSFHTMLL--------KIDGTLWATGQNTHSQLGVGGNTNINTPVKV-----MT 553
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V G +HT +V G +W+ G + LGL +N +P+ ++ G
Sbjct: 554 DVAAVSAGYYHTMIVKENGTLWATGNNQYGQLGLASILGTDKN------TPVKVTSMGAA 607
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEE 369
V+ G+ HT+++ DG LW+ GR G LG G T P V +
Sbjct: 608 VKA------VSAGSYHTMILKKDG-TLWATGRNNYGQLGDGTTDSKGMPVQVKASTTPND 660
Query: 370 FKQD 373
F D
Sbjct: 661 FMTD 664
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 83/210 (39%), Gaps = 22/210 (10%)
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
D ++ G N + QLG+G + P + T V V+ G +HT ++ + N
Sbjct: 523 DGTLWATGQNTHSQLGVGGNTNINTPVKVMT-------DVAAVSAGYYHTMIV----KEN 571
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
L W G + GQLG + VK + +V G +HT ++ G +
Sbjct: 572 GTL----WATGNNQYGQLGLASILGTDKNTPVKVTSMGAAVKAVSAGSYHTMILKKDGTL 627
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+ G L + ++ P+ + + D V+ G HT+++ D
Sbjct: 628 WATGRNNYGQLGDGTTDSKGM------PVQVKASTTPNDFMTDVEAVSTGVYHTMILKKD 681
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G LW+ G G LG G + D P VL
Sbjct: 682 G-TLWATGYNEYGQLGDGTSNDRSTPVQVL 710
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 59/149 (39%), Gaps = 24/149 (16%)
Query: 140 VALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRPKI-------IETFNQDSP 189
VA VSAGE + +D ++ G N GQLG D + + I F D
Sbjct: 716 VAAVSAGENHTMILKKDGTLWATGQNTYGQLGDSDSGTNKNTPVQVKDDTDISGFMTD-- 773
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V+ G HT +L ++ W G E GQLG G P QV +
Sbjct: 774 --VAAVSAGYGHTMIL--------KMDGTLWAIGRNEYGQLGVGNHNDTSTPVQVSSMGS 823
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
V +V G +T ++ G +W+ G
Sbjct: 824 DV--AAVFAGEAYTMILKKDGSLWATGFN 850
>gi|444916978|ref|ZP_21237086.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444711624|gb|ELW52563.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 734
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/313 (28%), Positives = 133/313 (42%), Gaps = 56/313 (17%)
Query: 58 DSLEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEG 108
+ L + T P+++ +V AGG SLA+ + G +W WG+ L D +T
Sbjct: 166 NQLGNVGATRSNLPVQVPGLSGVIAVVAGGYYSLALRSDGTVWAWGDNRYGQLGDGTTT- 224
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
P V + G V+ ++ GS H VAL S G ++WG N GQLG
Sbjct: 225 -----QRAVPVQVLNLSG--VMNLSAGSFHTVALRSDGS--------VWAWGFNAYGQLG 269
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
G SR +P + + V + G++H+ L R + W +G
Sbjct: 270 DGTTTSRFQPVQVGLSD------VLTLVAGNYHS--LAVRS------DGAVWAWGDNRYR 315
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
QLG GTT S+ VP Q L V LV G H+ V+ S G VWSWG + G + +
Sbjct: 316 QLGDGTTTSSRVPVQ-SGLSGGVTLV---AGYKHSLVLRSDGTVWSWG-DNVFGQLGDGT 370
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ +S + + V+ G H+V++ +G +W+WG SG LG
Sbjct: 371 FNPRSSAVKVSWLSLG-----------RADVSSGQLHSVVLDSNG-AVWAWGDNYSGQLG 418
Query: 349 TGKTIDFFAPAIV 361
G +D A V
Sbjct: 419 NGTGLDSLVAAPV 431
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/297 (29%), Positives = 127/297 (42%), Gaps = 63/297 (21%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
V +G + S+ +D+ GA+W WG+ S G + + S +PV G V V+
Sbjct: 388 ADVSSGQLHSVVLDSNGAVWAWGDNY---SGQLGNGTGLDSLVAAPV-GLGGS--VAVSA 441
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G +H + L + D ++WG N +GQLG G R RP + + V
Sbjct: 442 GFKHTLVLKA--------DTTVWAWGVNEHGQLGDGTLTDRTRPVQVAGLS-----GVSA 488
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
V+ GS+H+ L R N W +G GQLG GT L P QV L +V
Sbjct: 489 VSAGSYHSLAL----RSN----GTVWAWGFNRYGQLGDGTNTDRLQPVQVAGLSG---VV 537
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
+V G H+ + S G VW+WG N G G+G + +F
Sbjct: 538 AVAAGDSHSLALRSDGTVWAWGY--------------NFDGQI-------GDGSYSWRFL 576
Query: 315 DPVQ---------VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIV 361
PVQ V+ G H++ + DG +W+WG SG LG G T I+ AP V
Sbjct: 577 -PVQVVGLSGVVSVSAGGYHSLALRSDG-TVWTWGYNGSGQLGDGSTAINKPAPVQV 631
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/313 (28%), Positives = 128/313 (40%), Gaps = 56/313 (17%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D + T+ P+++ +V AG SLA+ + G +W WG L D +
Sbjct: 466 LGDGTLTDRTRPVQVAGLSGVSAVSAGSYHSLALRSNGTVWAWGFNRYGQLGDGTNT--- 522
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
P V G VV VA G H +AL S D ++WG N +GQ+G G
Sbjct: 523 ---DRLQPVQVAGLSG--VVAVAAGDSHSLALRS--------DGTVWAWGYNFDGQIGDG 569
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
R P + + V+ G +H+ L + WT+G +GQL
Sbjct: 570 SYSWRFLPVQVVGLSGVV-----SVSAGGYHSLALRS--------DGTVWTWGYNGSGQL 616
Query: 231 GHGTTQ-SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
G G+T + P QV L +VS+ G +H+ + S G VW+WG L + L
Sbjct: 617 GDGSTAINKPAPVQVAGLSG---VVSLGSGNYHSLGLRSDGTVWAWGFNFDGQLGDGSLL 673
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
R+ +P+ +SG V V G H++ DG +W+WG G LG
Sbjct: 674 NRS------TPVRVSG-------LSGVVSVVAGDYHSLARRSDG-TVWAWGYNGEGQLGD 719
Query: 350 GKTIDFFAPAIVL 362
G D P VL
Sbjct: 720 GTRNDTLVPVWVL 732
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 125/307 (40%), Gaps = 54/307 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF-SL 112
L D + + P+++ SV +G SL + + G +W WG+ +T G +
Sbjct: 68 LGDGTLVDSPTPVRVTNLSGVVSVASGDYHSLGLSSDGTVWAWGD------NTAGQLGNG 121
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG-LGD 171
+S +P PV + VV + G H +AL S D ++WG N QLG +G
Sbjct: 122 TASASPVPVRVQNLSGVVSLGSGFSHGLALRS--------DGTVWAWGDNRYNQLGNVGA 173
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
S L P + + V V G +++ L + W +G GQLG
Sbjct: 174 TRSNL-PVQVPGLS-----GVIAVVAGGYYSLALRS--------DGTVWAWGDNRYGQLG 219
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GTT VP QV L ++++ G FHT + S G VW+WG L + +R
Sbjct: 220 DGTTTQRAVPVQVLNLSG---VMNLSAGSFHTVALRSDGSVWAWGFNAYGQLGDGTTTSR 276
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
P+ + D + + G H++ V DG +W+WG R LG G
Sbjct: 277 ------FQPVQVG--------LSDVLTLVAGNYHSLAVRSDG-AVWAWGDNRYRQLGDGT 321
Query: 352 TIDFFAP 358
T P
Sbjct: 322 TTSSRVP 328
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 96/235 (40%), Gaps = 38/235 (16%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ ++A G H V + S D ++WG N GQLG G P + +
Sbjct: 37 SAARLALGQYHSVGVHS--------DGTVWAWGFNRQGQLGDGTLVDSPTPVRVTNLS-- 86
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V V G +H+ L+ + W +G GQLG+GT ++ VP +V+ L
Sbjct: 87 ---GVVSVASGDYHSLGLSS--------DGTVWAWGDNTAGQLGNGTASASPVPVRVQNL 135
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+VS+ G H + S G VW+WG + N TR+ P+ +
Sbjct: 136 SG---VVSLGSGFSHGLALRSDGTVWAWGDNR-YNQLGNVGATRSNL-----PVQV---- 182
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
P + V G +++ + DG +W+WG R G LG G T P VL
Sbjct: 183 ---PGLSGVIAVVAGGYYSLALRSDG-TVWAWGDNRYGQLGDGTTTQRAVPVQVL 233
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/279 (27%), Positives = 117/279 (41%), Gaps = 45/279 (16%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+ + + G +W WG G +LV S TP V + G VV VA G H + L
Sbjct: 48 SVGVHSDGTVWAWG---FNRQGQLGDGTLVDSPTPVRVTNLSG--VVSVASGDYHSLGLS 102
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S D ++WG N GQLG G + P ++ + V+ GS +
Sbjct: 103 S--------DGTVWAWGDNTAGQLGNGTASASPVPVRVQNLSG-------VVSLGSGFSH 147
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
L R + W +G QLG+ G T+S L P QV P +++V G ++
Sbjct: 148 GLALRS------DGTVWAWGDNRYNQLGNVGATRSNL-PVQV---PGLSGVIAVVAGGYY 197
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+ + S G VW+WG + G + + T+ P+ + + ++ G
Sbjct: 198 SLALRSDGTVWAWGDNR-YGQLGDGTTTQRAV-----PVQV-------LNLSGVMNLSAG 244
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ HTV + DG +W+WG G LG G T F P V
Sbjct: 245 SFHTVALRSDG-SVWAWGFNAYGQLGDGTTTSRFQPVQV 282
>gi|196002709|ref|XP_002111222.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
gi|190587173|gb|EDV27226.1| hypothetical protein TRIADDRAFT_54961 [Trichoplax adhaerens]
Length = 575
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 104/239 (43%), Gaps = 37/239 (15%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+V +ACGS+ A+ +GE + +WG G LG GD E+ PK +E F
Sbjct: 348 IVDIACGSDSSAAISDSGELF--------TWGCGFQGCLGHGDTETYKLPKKVEAFKD-- 397
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V +V CG +H + ++ R W++G G GQLG+G + + L P V++LP
Sbjct: 398 -YHVSKVACGCWHMLAIVNQNR--------IWSWGHGHYGQLGNGQSANCLQPILVEQLP 448
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI--SPILISGN 306
++ V CG + +S G +WSWG N NE I P L+
Sbjct: 449 HILW-AKVICGWDISFALSQDGYIWSWGY--------NGDFMVNECSRLIVDEPQLLYRL 499
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI---DFFAPAIVL 362
K D C H V + DG +L+ WG G LG G I +F P L
Sbjct: 500 ADQDKKIVDLGASNC---HCVALAADG-ELYLWGANDKGRLGNGSDIKDCNFPKPCTAL 554
Score = 42.0 bits (97), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 72/167 (43%), Gaps = 34/167 (20%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V F + V KVACG H++A+V+ +SWG + GQLG G + L+
Sbjct: 389 PKKVEAFKDYHVSKVACGCWHMLAIVNQNRI--------WSWGHGHYGQLGNGQSANCLQ 440
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P ++E WA +V CG + L+ + W++G NG
Sbjct: 441 PILVEQLPH-ILWA--KVICGWDISFALSQ--------DGYIWSWGY--NGDFMVNECSR 487
Query: 238 ALVPEQVKELPQYVYLVS------VDCGL--FHTSVVSSAGDVWSWG 276
+V E PQ +Y ++ VD G H +++ G+++ WG
Sbjct: 488 LIVDE-----PQLLYRLADQDKKIVDLGASNCHCVALAADGELYLWG 529
Score = 40.0 bits (92), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 93/224 (41%), Gaps = 32/224 (14%)
Query: 157 YSWGANNNGQLGLGD--RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
Y+WGAN QLG + ++ L P + E + P +T G T ++T ND
Sbjct: 182 YAWGANRYSQLGGINLKEDTVLVPTVNEIMSNLKP---NMMTAGLGCTFIVT-----NDG 233
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+C G G++G+LG GT ++P + + S CG H ++ G V S
Sbjct: 234 CIYVC---GHGQDGRLGLGTVNHVVIPRPIHLKVFITKVASFYCGQ-HALALTGNGIVLS 289
Query: 275 WGM----EKGLGLC---PNASLTRNEAGDAISPILISGNGPHG----------PKFQDPV 317
WG + G G C + L + + P+L + V
Sbjct: 290 WGSNIYGQLGHGHCRYFTASQLATMSSCNISKPLLSFFFLNLLWMESYMVIDTISSKHIV 349
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ACG+ + ++D G +L++WG G G LG G T + P V
Sbjct: 350 DIACGSDSSAAISDSG-ELFTWGCGFQGCLGHGDTETYKLPKKV 392
Score = 40.0 bits (92), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
++V + CG ++ +S +G++++WG + LG + + +A +S
Sbjct: 347 HIVDIACGSDSSAAISDSGELFTWGCGFQGCLGHGDTETYKLPKKVEAFKDYHVS----- 401
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
+VACG H + + + ++WSWG G G LG G++ + P +V P
Sbjct: 402 --------KVACGCWHMLAIVNQN-RIWSWGHGHYGQLGNGQSANCLQPILVEQLP 448
>gi|126330876|ref|XP_001375975.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Monodelphis
domestica]
Length = 1016
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 124/284 (43%), Gaps = 33/284 (11%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVKVACGSEH 138
G SL + + G +W GN +S + G P+ + +V V+CG EH
Sbjct: 45 GERHSLLLLSDGTVWSCGN----NSCGQLGRKRCQKHGRPAQIQALETQDIVSVSCGKEH 100
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+A+ G +SWG+ ++GQLG+ RE + I + ++ S + + +V+CG
Sbjct: 101 SLAICKEGRV--------FSWGSGSDGQLGI--REFKKLSSIPKKIDELSSFKIIQVSCG 150
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG-TTQSALVPEQVKELPQYVYLVSVD 257
+H+ L R +++G +GQLG G S P+ VK L + L V
Sbjct: 151 HYHSIALAQDGR--------VFSWGKNNHGQLGLGENVPSQASPQWVKSLDG-IPLAQVA 201
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV 317
G H+ +S +G + WG L + + E+ + IS G K
Sbjct: 202 AGGAHSFALSFSGTSYGWGRNNAGQLALSG---KKESAEQISKPFSIGE----LKRLQVT 254
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++CG HT ++T DG K++++G SG LG P +V
Sbjct: 255 YISCGDEHTAVLTQDG-KVFTFGSNDSGQLGRQLISGMKGPQVV 297
Score = 70.9 bits (172), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 126/282 (44%), Gaps = 56/282 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTV 129
I SV G SLAI G ++ WG S ++G + S P + + +
Sbjct: 91 IVSVSCGKEHSLAICKEGRVFSWG------SGSDGQLGIREFKKLSSIPKKIDELSSFKI 144
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG H +AL G + SWG NN+GQLGLG+ S+ P+ +++ +
Sbjct: 145 IQVSCGHYHSIALAQDGRVF--------SWGKNNHGQLGLGENVPSQASPQWVKSLD-GI 195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSA---LVPEQV 244
P A +V G H+ L+ + +G GQL G +SA P +
Sbjct: 196 PLA--QVAAGGAHSFALS--------FSGTSYGWGRNNAGQLALSGKKESAEQISKPFSI 245
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
EL + + + + CG HT+V++ G V+++G N++G + LIS
Sbjct: 246 GELKR-LQVTYISCGDEHTAVLTQDGKVFTFG--------------SNDSGQ-LGRQLIS 289
Query: 305 GNGPHGPKFQDPV----QVACGAAHTVLVTDDGYKLWSWGRG 342
G GP+ D Q+ACG+ HT+ + ++ S+G G
Sbjct: 290 GM--KGPQVVDSAVSFSQIACGSYHTLAYSCTTGQVISFGCG 329
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDS--PWAVYEVTCGSFHTALLTHRKRPNDM 214
Y WG N++GQLG+ R + + + S + + CG H+ LL +
Sbjct: 3 YCWGDNSSGQLGI-PAVPRAKARAVRCRRGASLGNQTLLQAACGERHSLLL--------L 53
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W+ G GQLG Q P Q++ L + +VSV CG H+ + G V+S
Sbjct: 54 SDGTVWSCGNNSCGQLGRKRCQKHGRPAQIQAL-ETQDIVSVSCGKEHSLAICKEGRVFS 112
Query: 275 W--GMEKGLGLCPNASLTR-NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
W G + LG+ L+ + D +S I +QV+CG H++ +
Sbjct: 113 WGSGSDGQLGIREFKKLSSIPKKIDELSSFKI-------------IQVSCGHYHSIALAQ 159
Query: 332 DGYKLWSWGRGRSGVLGTGKTI 353
DG +++SWG+ G LG G+ +
Sbjct: 160 DG-RVFSWGKNNHGQLGLGENV 180
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 57/132 (43%), Gaps = 14/132 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT-PSPVWDFHGHTVV 130
I + V AGG S A+ +G + WG + G + P + + V
Sbjct: 195 IPLAQVAAGGAHSFALSFSGTSYGWGRNNAGQLALSGKKESAEQISKPFSIGELKRLQVT 254
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CG EH L G+ +++G+N++GQLG P+++ DS
Sbjct: 255 YISCGDEHTAVLTQDGKV--------FTFGSNDSGQLGRQLISGMKGPQVV-----DSAV 301
Query: 191 AVYEVTCGSFHT 202
+ ++ CGS+HT
Sbjct: 302 SFSQIACGSYHT 313
>gi|50418309|gb|AAH77375.1| MGC81587 protein [Xenopus laevis]
Length = 677
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 134/302 (44%), Gaps = 44/302 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG+ + + G S+ + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFSWGHA----AHGQIGVSIAEDYIRVPRNIKSLSDIQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
VACG H +AL Y SWG N GQLGLG ++ P+ I++ + P+
Sbjct: 142 VACGHHHSLALSKESNIY--------SWGQNQYGQLGLGSEKRKESAPRHIKSLS-GIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A + G H+ LT + + +G + GQLG P +K L +
Sbjct: 193 A--HIAAGGGHSFALT--------ISGAIFGWGRNKFGQLGLNDETDRSDPALLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISGNG 307
++ + CG HT+ ++ G V+++G G G L N A ++P + GN
Sbjct: 242 QKIIYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSASHEVNPRKVFELMGN- 294
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
Q+ACG HT+ +++S+G G +G LG G T + +P++V LT
Sbjct: 295 -------IVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGIGSTSNKKSPSMVKGNWLT 347
Query: 368 EE 369
E
Sbjct: 348 HE 349
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 98/240 (40%), Gaps = 37/240 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGH 127
I+I V G SLA+ ++ WG + G L S P + G
Sbjct: 137 IQIVQVACGHHHSLALSKESNIYSWGQ------NQYGQLGLGSEKRKESAPRHIKSLSGI 190
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+A G H AL +G + WG N GQLGL D R P ++++
Sbjct: 191 PFAHIAAGGGHSFALTISG--------AIFGWGRNKFGQLGLNDETDRSDPALLKSLRSQ 242
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ + CG HTA LT E +TFG G GQLGH + + P +V EL
Sbjct: 243 K---IIYICCGEDHTAALTK--------EGGVFTFGAGGYGQLGHNSASHEVNPRKVFEL 291
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + + CG HT + V S+G ++S+ GL N L + SP ++ GN
Sbjct: 292 MGNI-VTQIACGRQHTLAFVPSSGRIYSF------GLGGNGQLGIGSTSNKKSPSMVKGN 344
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 97/199 (48%), Gaps = 37/199 (18%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E + P+ + F + V +V CG+ HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEVVIEPRRCDFFINKN---VRDVGCGNRHTGFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L + +V+V CG HT ++ G V+SWG
Sbjct: 53 GTVYTCGCNDLGQLGHDKSRKK--PEQVGALDAQI-IVAVSCGEAHTLALNDKGQVFSWG 109
Query: 277 M----EKGLGLCPN-ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+ G+ + + + RN ++S I I VQVACG H++ ++
Sbjct: 110 HAAHGQIGVSIAEDYIRVPRNI--KSLSDIQI-------------VQVACGHHHSLALSK 154
Query: 332 DGYKLWSWGRGRSGVLGTG 350
+ ++SWG+ + G LG G
Sbjct: 155 ES-NIYSWGQNQYGQLGLG 172
>gi|356499563|ref|XP_003518608.1| PREDICTED: uncharacterized protein LOC100805364 [Glycine max]
Length = 1120
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 134/295 (45%), Gaps = 41/295 (13%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
V G S A+ AG L+ WG+ + ++ G S VS + P + G + VACG
Sbjct: 335 VACGEFHSCAVTMAGELYTWGDG-MHNAGLLGHGSNVSHWIPKRIAGPLEGLQIAFVACG 393
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + S G+ +++G G LG GDR++ P+ +E+ V
Sbjct: 394 PWHTALITSTGQ--------LFTFGDGTFGVLGHGDRQNVSYPREVESL---LGLRTIAV 442
Query: 196 TCGSFHTA-----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
CG +HTA + TH + +T+G G+ +LGHG ++ L P V L Y
Sbjct: 443 ACGVWHTAAVVEVIATHSG--TSISSGKLFTWGDGDKNRLGHGDKEARLKPTCVSALIDY 500
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS----PILISGN 306
+ + CG T ++++G V++ G S + G ++S P L+ G+
Sbjct: 501 NFH-KIACGHSLTVGLTTSGRVFTMG-----------STVYGQLGSSLSDGKVPCLV-GD 547
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G + ++ACGA H ++T ++++WG+G +G LG G D PA+V
Sbjct: 548 KIAGESIE---EIACGAYHVAVLTSKN-EVYTWGKGANGRLGHGDIEDRKTPALV 598
Score = 69.7 bits (169), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 123/305 (40%), Gaps = 67/305 (21%)
Query: 86 AIDNAGALW---MWGNCPLPDSSTEGGFSLVSSFTPSP------------VWDFHGHTVV 130
A D+ ALW +WG + G V+ F+P V D H
Sbjct: 228 APDDYDALWDVYIWGEVTCENVKV-GADKNVNYFSPRADVLLPRPLESNVVLDVH----- 281
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+ACG H + GE + +WG + G+LG G ++ ++P+++E +
Sbjct: 282 HIACGVRHASLVTRQGEVF--------TWGEESGGRLGHGVGKNVVQPRLVEALISTT-- 331
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ V CG FH+ +T E W G+ G LGHG+ S +P+++ +
Sbjct: 332 -IDFVACGEFHSCAVTMAG------ELYTWGDGMHNAGLLGHGSNVSHWIPKRIAGPLEG 384
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGN 306
+ + V CG +HT++++S G ++++G G G N S R + +L
Sbjct: 385 LQIAFVACGPWHTALITSTGQLFTFGDGTFGVLGHGDRQNVSYPRE-----VESLL---- 435
Query: 307 GPHGPKFQDPVQVACGAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFF 356
+ VACG HT V+ T G KL++WG G LG G
Sbjct: 436 ------GLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEARL 489
Query: 357 APAIV 361
P V
Sbjct: 490 KPTCV 494
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 93/215 (43%), Gaps = 26/215 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRES 174
P V G + VACG H A+V T+ G + ++WG + +LG GD+E+
Sbjct: 428 PREVESLLGLRTIAVACGVWHTAAVVEVIATHSGTSISSGKLFTWGDGDKNRLGHGDKEA 487
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
RL+P + + +++ CG T LT R +T G GQLG +
Sbjct: 488 RLKPTCVSALID---YNFHKIACGHSLTVGLTTSGR--------VFTMGSTVYGQLG-SS 535
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
VP V + + + CG +H +V++S +V++WG KG N L +
Sbjct: 536 LSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVYTWG--KGA----NGRLGHGDI 589
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
D +P L+ K+ +ACG+ ++ +
Sbjct: 590 EDRKTPALVEALKDRHVKY-----IACGSNYSAAI 619
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 52/114 (45%), Gaps = 12/114 (10%)
Query: 109 GFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
G SL P V D G ++ ++ACG+ HV L S E Y +WG NG+L
Sbjct: 533 GSSLSDGKVPCLVGDKIAGESIEEIACGAYHVAVLTSKNEVY--------TWGKGANGRL 584
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
G GD E R P ++E V + CGS ++A + K + +S C T
Sbjct: 585 GHGDIEDRKTPALVEALKDRH---VKYIACGSNYSAAICLHKWVSGAEQSQCST 635
>gi|344251059|gb|EGW07163.1| putative E3 ubiquitin-protein ligase HERC1 [Cricetulus griseus]
Length = 1016
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 249 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 305
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 306 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 354
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 355 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 406
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 407 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 455
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 456 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 492
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 394 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 447
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 448 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 499
Query: 189 PWAVYEVTCGSFHTALLTHRKRP 211
+ +++ G H+A T P
Sbjct: 500 ---IRQISAGRCHSAAWTAPPVP 519
>gi|449268693|gb|EMC79542.1| X-linked retinitis pigmentosa GTPase regulator, partial [Columba
livia]
Length = 719
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 100/212 (47%), Gaps = 40/212 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS-PVWDFHGHTVVK 131
KI + AG S A+ G L++WG+ ++EG L S P G V
Sbjct: 136 KIKQLAAGSYTSAAVTEDGQLFVWGD------NSEGQIGLADEACVSVPCQVDVGKPVSS 189
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------GDRESRLRPKIIETFN 185
++CG H + GE Y++G NG+LGL +R + P I+E N
Sbjct: 190 ISCGYYHSALITGDGE--------LYTFGEPENGKLGLLPEQLKNNRVPQPVPGIMEKVN 241
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQV 244
+ V CG HT +LT E+ +TFGLG+ GQLGHGT VP+ V
Sbjct: 242 K--------VACGGEHTVVLT---------ETDVYTFGLGQYGQLGHGTFIFETSVPKSV 284
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
K L ++ + ++ CG HT+VV+ G ++++G
Sbjct: 285 KHLRRH-KICNITCGENHTAVVAENGLMFTFG 315
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 121/282 (42%), Gaps = 46/282 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVA 133
+ G + + G L+M+G S+ G L S T P+ V
Sbjct: 35 ISCGDEHTAIVTGNGKLYMFG------SNNWGQLGLGSKNTVSKPTCVKALKPEKTKLAV 88
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG H + G Y + G N+ GQLGLGD E R +I F +
Sbjct: 89 CGRNHTLVYTEKGNVY--------AAGGNSEGQLGLGDTEERSTFHLISFFTNQ--HKIK 138
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ GS+ +A +T + + +G GQ+G VP QV ++ + V
Sbjct: 139 QLAAGSYTSAAVTE--------DGQLFVWGDNSEGQIGLADEACVSVPCQV-DVGKPVS- 188
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGP 311
S+ CG +H+++++ G+++++G E G LGL P L N + I+ N
Sbjct: 189 -SISCGYYHSALITGDGELYTFGEPENGKLGLLPE-QLKNNRVPQPVPGIMEKVN----- 241
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+VACG HTV++T+ ++++G G+ G LG G I
Sbjct: 242 ------KVACGGEHTVVLTET--DVYTFGLGQYGQLGHGTFI 275
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 89/226 (39%), Gaps = 61/226 (26%)
Query: 24 YTSLNCCMDGQLGFSGSNS------------LVPCVIEQFLTIGAPDSLEDDSKTNHKAP 71
YTS DGQL G NS VPC ++ +G P
Sbjct: 145 YTSAAVTEDGQLFVWGDNSEGQIGLADEACVSVPCQVD----VGKP-------------- 186
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF--SLVSSFTPSPVWDFHGHTV 129
+ S+ G S I G L+ +G P++ G L ++ P PV V
Sbjct: 187 --VSSISCGYYHSALITGDGELYTFGE---PENGKLGLLPEQLKNNRVPQPVPGIM-EKV 240
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQD 187
KVACG EH V L + Y++G GQLG G E+ + PK ++ +
Sbjct: 241 NKVACGGEHTVVLT---------ETDVYTFGLGQYGQLGHGTFIFETSV-PKSVKHLRR- 289
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ +TCG HTA++ + +TFG G +G+LG G
Sbjct: 290 --HKICNITCGENHTAVVAEN--------GLMFTFGDGRHGKLGLG 325
>gi|7939537|dbj|BAA95740.1| chromosome condensation regulator-like protein protein [Arabidopsis
thaliana]
Length = 1067
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 131/296 (44%), Gaps = 44/296 (14%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + + +G L+ WG+ + + G S +S + P V G V+ VACG
Sbjct: 317 VACGEYHTCVVSTSGDLFSWGDG-IHNVGLLGHGSDISHWIPKRVSGPLEGLQVLSVACG 375
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H + G+ +++G G LG G+RES PK +++ N +V
Sbjct: 376 TWHSALATANGK--------LFTFGDGAFGVLGHGNRESVSYPKEVQSLNG---LKTVKV 424
Query: 196 TCGSFHTALLTHR--KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
C +HTA + + M +T+G G+ +LGHG ++ L+P V L Y +
Sbjct: 425 ACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCVSSLIDYNFH 484
Query: 254 VSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ CG T ++++G V++ G LG N D P L+
Sbjct: 485 -KIACGHTFTVALTTSGHVFTMGGTAHGQLG---------NSISDGKLPCLV-------- 526
Query: 312 KFQDPV------QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
QD + ++ACGA H ++T ++++WG+G +G LG G T D P +V
Sbjct: 527 --QDRLVGEFVEEIACGAHHVAVLTSRS-EVFTWGKGANGRLGHGDTEDKRTPTLV 579
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 126/295 (42%), Gaps = 41/295 (13%)
Query: 80 GGMMSLAIDNAGALWMWGNC----PLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
GG I++ G +++WG LPD + TP P+ V ++ CG
Sbjct: 209 GGSGPDDIESLGDVYVWGEVWTEGILPDGTASNETVKTDVLTPRPLESNVVLDVHQIVCG 268
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
HV + GE + +WG G+LG G + RPK++E + + V
Sbjct: 269 VRHVALVTRQGEVF--------TWGEEVGGRLGHGIQVDISRPKLVEFLALTN---IDFV 317
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
CG +HT +++ D+ W G+ G LGHG+ S +P++V + + ++S
Sbjct: 318 ACGEYHTCVVS---TSGDLFS---WGDGIHNVGLLGHGSDISHWIPKRVSGPLEGLQVLS 371
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V CG +H+++ ++ G ++++G + G+ + N + + S NG
Sbjct: 372 VACGTWHSALATANGKLFTFG-DGAFGVLGHG----NRESVSYPKEVQSLNG------LK 420
Query: 316 PVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V+VAC HT + + KL++WG G LG G + P V
Sbjct: 421 TVKVACSIWHTAAIVEVMGQTATSMSSRKLFTWGDGDKNRLGHGNKETYLLPTCV 475
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 81/178 (45%), Gaps = 31/178 (17%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WG+ D + G + + P+ V + K+ACG VAL ++G +
Sbjct: 450 LFTWGDG---DKNRLGHGNKETYLLPTCVSSLIDYNFHKIACGHTFTVALTTSGHVF--- 503
Query: 153 DLVCYSWGANNNGQLGLGDRESRL----RPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+ G +GQLG + +L + +++ F V E+ CG+ H A+LT R
Sbjct: 504 -----TMGGTAHGQLGNSISDGKLPCLVQDRLVGEF-------VEEIACGAHHVAVLTSR 551
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
S +T+G G NG+LGHG T+ P V+ L ++ S+ CG TS +
Sbjct: 552 --------SEVFTWGKGANGRLGHGDTEDKRTPTLVEALRDR-HVKSLSCGSNFTSSI 600
>gi|444915470|ref|ZP_21235602.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444713401|gb|ELW54301.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 852
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/322 (27%), Positives = 126/322 (39%), Gaps = 56/322 (17%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTE 107
I + L D + + P+++ V AG SLA+ G +W WG + S
Sbjct: 216 INSSGQLGDGTTNDRLTPVQVAGLSSIKRVAAGDGYSLAVHGDGTVWAWG---INSSGQL 272
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVAC------GSEHVVALVSAGETYKGEDLVCYSWGA 161
G + TP V VV+V+ GS HV+A+ +G+ V ++WG
Sbjct: 273 GDGTTTDRLTPGRVKGLS--EVVEVSAAKYSLLGSAHVLAV-------RGDGTV-WAWGN 322
Query: 162 NNNGQLGLGDRESRLRPKIIETFNQDSPWAV-----YEVTCGSFHTALLTHRKRPNDMLE 216
N +GQLG G RL P + + AV + GS+ A+ +
Sbjct: 323 NGSGQLGDGTTTDRLTPVQVSELDGVKAIAVGNSFPLSNSNGSYSLAVRG---------D 373
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
W +G GQLG GTT S P QV L + +V H + G VWSWG
Sbjct: 374 GTVWAWGSNSTGQLGDGTTISRSRPAQVNALSG---ITAVSASSDHALAMRDDGTVWSWG 430
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
N L + P+ + G VA G +H+V V +DG K
Sbjct: 431 KNT------NGKLGDETTAHRLIPVQVHG-------LSGVRSVAAGESHSVSVREDG-KA 476
Query: 337 WSWGRGRSGVLGTGKTIDFFAP 358
W+WG G+LG G F P
Sbjct: 477 WAWGYRGMGLLGDGAMFLSFVP 498
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 99/387 (25%), Positives = 150/387 (38%), Gaps = 80/387 (20%)
Query: 13 CFTCFFMPFICYTSLNCCMDGQLGFSGSNSLV----PCVIEQFLTIGA-------PDS-- 59
C P + T N LG S S S V P I + +G PD
Sbjct: 107 CVPSGVTPTVTATVQNA-----LGLSASASFVLSSSPTCIAPAVAVGTQHTLLLRPDGTV 161
Query: 60 ----------LEDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCPLPD 103
L D + TN P++ I +V A SLA+ + G +W WG +
Sbjct: 162 WAWGPNDYGQLGDGTTTNRPVPVQVGGLSGIRAVAASSDHSLAVRDDGTVWAWG---INS 218
Query: 104 SSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANN 163
S G + TP V ++ +VA G + +A+ D ++WG N+
Sbjct: 219 SGQLGDGTTNDRLTPVQVAGLS--SIKRVAAGDGYSLAVHG--------DGTVWAWGINS 268
Query: 164 NGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
+GQLG G RL P ++ ++ V EV+ + +LL + W +G
Sbjct: 269 SGQLGDGTTTDRLTPGRVKGLSE-----VVEVSAAKY--SLLGSAHVLAVRGDGTVWAWG 321
Query: 224 LGENGQLGHGTTQSALVPEQVKELPQYVYLVSV-------DCGLFHTSVVSSAGDVWSWG 276
+GQLG GTT L P QV EL V ++V + ++ V G VW+WG
Sbjct: 322 NNGSGQLGDGTTTDRLTPVQVSEL-DGVKAIAVGNSFPLSNSNGSYSLAVRGDGTVWAWG 380
Query: 277 MEKGLGLCPNASLTRNEAG--DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
L +++R+ +A+S I V+ + H + + DDG
Sbjct: 381 SNSTGQLGDGTTISRSRPAQVNALSGI---------------TAVSASSDHALAMRDDG- 424
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+WSWG+ +G LG T P V
Sbjct: 425 TVWSWGKNTNGKLGDETTAHRLIPVQV 451
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/395 (25%), Positives = 147/395 (37%), Gaps = 74/395 (18%)
Query: 6 YYYHYYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPD--SLEDD 63
Y L F+ F+ ++ Q+ G+ SL G+ L D
Sbjct: 481 YRGMGLLGDGAMFLSFVPVQTMGLTATAQIASHGNRSLAVKEDNTLWVWGSSSLGDLGDG 540
Query: 64 SKTNHKAPIKIC----SVKAGGMMSLAIDNAGALWMWGN---------------CPLPDS 104
S H P I +V AG SLA+ N G+LW WG+ P+P +
Sbjct: 541 STGAHPVPSSILDDVKAVAAGNDYSLAVRNNGSLWAWGSNSIGQLGDGSTTNRLTPVPVN 600
Query: 105 STEGGFSLVSSFTPS-------PVWDFHGHTVVKVACGSE-------------HVVALVS 144
E +SF+ S VW + ++V ++ GS H+V + +
Sbjct: 601 GLENVVGAAASFSVSLALRSDGTVWAWGLNSVGQLGDGSTINRSTPGPVGGLVHIVGVAT 660
Query: 145 AGETYKG--EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+G D ++WG N++GQLG G T NQ P V ++
Sbjct: 661 SGGHSLALRNDGTVWAWGGNHDGQLGDG-----------TTTNQPKPVQVSGLSGVKAVA 709
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
A + D W +G +GQLG GTT L P V L L S G H
Sbjct: 710 AAIVSSAVVRD--NGTVWAWGDNYSGQLGDGTTTDRLTPVLVSGLSGVKALAS---GNHH 764
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
+ + G VW+WG L R+ +P+ + G D +A G
Sbjct: 765 FLALRNDGTVWAWGDNYYSQLGDGTRTQRS------TPVQVRG-------LSDVKLIAAG 811
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
H++ V DG +W+WG SG LG G +DF A
Sbjct: 812 ENHSMAVRKDG-TVWTWGLNTSGQLGNG-LLDFSA 844
Score = 71.6 bits (174), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 119/282 (42%), Gaps = 42/282 (14%)
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
LA+ G +W WGN S G + TP V + G V +A G+ L +
Sbjct: 309 LAVRGDGTVWAWGNN---GSGQLGDGTTTDRLTPVQVSELDG--VKAIAVGNSF--PLSN 361
Query: 145 AGETY----KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
+ +Y +G+ V ++WG+N+ GQLG G SR RP + + + V+ S
Sbjct: 362 SNGSYSLAVRGDGTV-WAWGSNSTGQLGDGTTISRSRPAQVNALS-----GITAVSASSD 415
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
H L R + W++G NG+LG TT L+P QV L + SV G
Sbjct: 416 HA--LAMRD------DGTVWSWGKNTNGKLGDETTAHRLIPVQVHGLSG---VRSVAAGE 464
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
H+ V G W+WG +G+GL + ++ + P+ G Q+A
Sbjct: 465 SHSVSVREDGKAWAWGY-RGMGLLGDGAMFL-----SFVPVQTMG-------LTATAQIA 511
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
++ V +D LW WG G LG G T P+ +L
Sbjct: 512 SHGNRSLAVKED-NTLWVWGSSSLGDLGDGSTGAHPVPSSIL 552
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 113/281 (40%), Gaps = 45/281 (16%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
G SLA+ LW+WG+ L D G S + PS + D V VA G+++ +
Sbjct: 514 GNRSLAVKEDNTLWVWGSSSLGD---LGDGSTGAHPVPSSILD----DVKAVAAGNDYSL 566
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
A+ + G ++WG+N+ GQLG G +RL P + SF
Sbjct: 567 AVRNNGS--------LWAWGSNSIGQLGDGSTTNRLTPVPVNGLEN------VVGAAASF 612
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
+L + W +GL GQLG G+T + P V L V++V V
Sbjct: 613 SVSLALRS-------DGTVWAWGLNSVGQLGDGSTINRSTPGPVGGL---VHIVGVATSG 662
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
H+ + + G VW+WG + L + P+ +SG V+
Sbjct: 663 GHSLALRNDGTVWAWGGNH------DGQLGDGTTTNQPKPVQVSG--------LSGVKAV 708
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
A + V D +W+WG SG LG G T D P +V
Sbjct: 709 AAAIVSSAVVRDNGTVWAWGDNYSGQLGDGTTTDRLTPVLV 749
Score = 44.3 bits (103), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 75/189 (39%), Gaps = 34/189 (17%)
Query: 60 LEDDSKTNHKAPIKICSVKA-------GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D + TN P+++ + ++ DN G +W WG+ S G +
Sbjct: 685 LGDGTTTNQPKPVQVSGLSGVKAVAAAIVSSAVVRDN-GTVWAWGDNY---SGQLGDGTT 740
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
TP V G V +A G+ H +AL D ++WG N QLG G R
Sbjct: 741 TDRLTPVLVSGLSG--VKALASGNHHFLALR--------NDGTVWAWGDNYYSQLGDGTR 790
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
R P + + V + G H+ + RK + WT+GL +GQLG+
Sbjct: 791 TQRSTPVQVRGLSD-----VKLIAAGENHS--MAVRK------DGTVWTWGLNTSGQLGN 837
Query: 233 GTTQSALVP 241
G + +P
Sbjct: 838 GLLDFSALP 846
>gi|66358878|ref|XP_626617.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
gi|46228329|gb|EAK89228.1| RCC1 domain containing protein [Cryptosporidium parvum Iowa II]
Length = 1878
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 103/241 (42%), Gaps = 38/241 (15%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETF 184
GH+ + A H + A KG+ Y+WG N N LGLG P + F
Sbjct: 36 GHSFTRAASSLNHY--FIVAKLKNKGQ---LYAWGVNTNNVLGLGIENGEFNFPMKVNFF 90
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
S V++V+CG HTA+L + +T GLG+ G+LG+ + E
Sbjct: 91 ---SALEVFQVSCGYSHTAVLV---KGISEASGRVYTMGLGDRGRLGYTRGYTEFGNEHD 144
Query: 245 K---------------ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
K P + + CG H+ +S +G V++WG+ + L
Sbjct: 145 KNDLNESWYTPVPCIVNFPFNAKISRISCGANHSLALSDSGLVFAWGIGQ------YGCL 198
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E D SP+ I GP + + +A GA H++ +DG ++++WG +G LGT
Sbjct: 199 GTGELNDVYSPVKIEA----GPTDKKVLHIAAGARHSLCCNEDG-QVFAWGSNSNGRLGT 253
Query: 350 G 350
G
Sbjct: 254 G 254
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 131/305 (42%), Gaps = 59/305 (19%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
G +S + G L+ + S+E G SLV S PS W +V ++ACG+ H
Sbjct: 449 GNKVSYEPKSEGGLFSVNRIYKSNGSSEIG-SLVGSQIPS--W-----SVRQIACGTSHT 500
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR--PKIIETFNQDSPWAVYE--- 194
+ LV G ++WG N GQLG+ R + + K N+ + E
Sbjct: 501 LLLVYGG--------TIFAWGDNKYGQLGVDTRRRKSQNGDKNESFLNEPTEIKFSEPIR 552
Query: 195 -VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V CGS+H+ ++ C+++G G+ GQLG G ++ P + L +
Sbjct: 553 RVACGSWHSLCCD--------IKGNCFSWGRGDRGQLGTGAIRNLYEPAGIVTLKN---V 601
Query: 254 VSVDCGLFHTSVVSS-------------AGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
+ V G +++ + + +GD+W WG + L + GD +
Sbjct: 602 IEVAGGELYSACIVACITTGNKDLDTINSGDLWIWG---------DGDLGKLGLGDHVLK 652
Query: 301 ILISGNGPHGPKFQDP-VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
I+ P P ++VA G++HT+++T G +L +WG G G LGT T P
Sbjct: 653 SCIA--APRHLNLGTPIIKVALGSSHTLVLTASG-ELITWGAGYYGRLGTNSTKSHSNPI 709
Query: 360 IVLWP 364
+ +P
Sbjct: 710 KIRFP 714
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 102/224 (45%), Gaps = 26/224 (11%)
Query: 60 LEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS 119
L + ++ PI+ V G SL D G + WG D G ++ + + P+
Sbjct: 539 LNEPTEIKFSEPIR--RVACGSWHSLCCDIKGNCFSWGRG---DRGQLGTGAIRNLYEPA 593
Query: 120 PVWDFHGHTVVKVACG---SEHVVALVSAG----ETYKGEDLVCYSWGANNNGQLGLGDR 172
+ V++VA G S +VA ++ G +T DL + WG + G+LGLGD
Sbjct: 594 GIVTLK--NVIEVAGGELYSACIVACITTGNKDLDTINSGDL--WIWGDGDLGKLGLGDH 649
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ N +P + +V GS HT +LT E + W G G G+LG
Sbjct: 650 VLKSCIAAPRHLNLGTP--IIKVALGSSHTLVLTASG------ELITW--GAGYYGRLGT 699
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+S P +++ + V +V + G +H+ VSS GD+W WG
Sbjct: 700 NSTKSHSNPIKIRFPIKGVQIVDIAVGSYHSMAVSSLGDLWVWG 743
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 101/214 (47%), Gaps = 35/214 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ ++G ++ WG + G L ++P VK+
Sbjct: 167 KISRISCGANHSLALSDSGLVFAWG---IGQYGCLGTGELNDVYSP-----------VKI 212
Query: 133 ACG-SEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRES-RLRPKIIETFNQD 187
G ++ V ++AG + ED ++WG+N+NG+LG G + P I++ +Q
Sbjct: 213 EAGPTDKKVLHIAAGARHSLCCNEDGQVFAWGSNSNGRLGTGGSYGMKTVPTQIKSLSQ- 271
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESM--CWTFGLGENGQLGHGTTQSALVPEQVK 245
+H L+ + + ++S +T+G G +G+LGHGT +P +++
Sbjct: 272 ------------YHITLVAAGESHSGCIDSFGYIYTWGNGGSGKLGHGTQSDCNIPRRIE 319
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ + V + G F++ +S +G+V+ WG ++
Sbjct: 320 GISSLPF-VQLTLGAFNSMALSQSGEVYIWGAKQ 352
>gi|432106315|gb|ELK32196.1| RCC1 and BTB domain-containing protein 1 [Myotis davidii]
Length = 531
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 105/251 (41%), Gaps = 33/251 (13%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ TP + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 61 STLTPKKLEALCGKKIKSLSYGSGPHVLLST-------EDGVVYAWGHNGYSQLGNGTTN 113
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P I+ V EV CGS H+ L + + +G GQ+G G
Sbjct: 114 QGIAP--IQVCTNLLIKQVVEVACGSHHSVALA--------ADGEVFAWGYNNCGQVGSG 163
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTR 291
+T + P +V +V + CG + V G+V+ WG LGL N +
Sbjct: 164 STANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDTGEVYGWGYNGNGQLGLGNNVNQLT 223
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
A+ + ++ Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 224 PVRVAALHSVCVN-------------QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGN 269
Query: 352 TIDFFAPAIVL 362
+ +P ++
Sbjct: 270 KNNLLSPTHIM 280
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 93/340 (27%), Positives = 136/340 (40%), Gaps = 53/340 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H VAL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSVALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDTGEVYGW--GYNGNGQLGLGNNVNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGNKNNLLSPTHI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAPA 359
K + AC +AHT G ++ WG RG+S VL T FA
Sbjct: 280 MVEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVVLPHLTHLSCTDDVFACFATP 339
Query: 360 IVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 340 AVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
>gi|348685253|gb|EGZ25068.1| hypothetical protein PHYSODRAFT_326137 [Phytophthora sojae]
Length = 5016
Score = 81.3 bits (199), Expect = 1e-12, Method: Composition-based stats.
Identities = 83/309 (26%), Positives = 124/309 (40%), Gaps = 57/309 (18%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH------TVVKVACGSEHVVALVSAG 146
L WG L + G ++ SS TP V F H ++ V+CG HV +
Sbjct: 195 LLAWG---LNSNGELGNGTMTSSPTPQMVVTFPLHFQREPLSIAHVSCGKHHVAVITGQA 251
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-----------------KIIETFNQDSP 189
+ +WG+N GQLGLGD SR +P +++ T Q
Sbjct: 252 RLF--------TWGSNKYGQLGLGDFSSRTQPEEVHFALATLSSHRRALRVMHTV-QHGG 302
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V CG+ HT +TH+++ M + GLG Q G + P V+ L
Sbjct: 303 NNVTHVACGAAHTLFVTHQQQILGMGYNQAGQLGLGHRLQQYKG--WRSCTPITVESLRD 360
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGP 308
L + G H++ V S GDV++WG + L + G+ ++ P LI
Sbjct: 361 QSIL-DLGAGQNHSACVLSNGDVYTWGCGD------DGRLGDGKLGEGVAVPTLI----- 408
Query: 309 HGPKFQDPV----QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
P ++ V CGA H +++D L+ WG G LG P ++ P
Sbjct: 409 --PLLREASIRARTVRCGARHMAVISDSDL-LYIWGANDFGQLGCKDRKPRSQPFLLATP 465
Query: 365 PLTEEFKQD 373
PL E +D
Sbjct: 466 PLFAEGVED 474
Score = 61.6 bits (148), Expect = 8e-07, Method: Composition-based stats.
Identities = 59/221 (26%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-E 173
S TP V +++ + G H ++S G+ Y +WG ++G+LG G E
Sbjct: 349 SCTPITVESLRDQSILDLGAGQNHSACVLSNGDVY--------TWGCGDDGRLGDGKLGE 400
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P +I + S A V CG+ H A+++ +D+L + +G + GQLG
Sbjct: 401 GVAVPTLIPLLREASIRA-RTVRCGARHMAVISD----SDLL----YIWGANDFGQLGCK 451
Query: 234 TTQSALVPEQVKELPQYVYLVS-VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
+ P + P + V V G FHT+ V+SAG ++WG+ +L N
Sbjct: 452 DRKPRSQPFLLATPPLFAEGVEDVALGEFHTTCVTSAGKAYTWGL----------NLRDN 501
Query: 293 EAGDAISPILISGNGPHG---PKFQDPVQVACGAAHTVLVT 330
A ++ S + P P+ + +V+CG HT +VT
Sbjct: 502 SA------LVASHHTPQAIDLPEKERVRKVSCGWTHTDIVT 536
>gi|126330678|ref|XP_001365078.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3 [Monodelphis
domestica]
Length = 1051
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I V G SLA+ + G L+ WG + L ++TE ++ P + + ++
Sbjct: 87 IIHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAI-----PRLIKKLNQQMIL 141
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSP 189
+V+CG+ H +AL + G+ ++WG N +GQLGLG S+ P+ +++ + P
Sbjct: 142 QVSCGNWHCMALAADGQ--------FFTWGQNRHGQLGLGKEFPSQASPQRVKSL-EGIP 192
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
A +V G H+ L+ L + +G GQLG P VK L +
Sbjct: 193 LA--QVAAGGAHSFALS--------LSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-LLR 241
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISGN 306
+V + CG HT+V++ +G V+++G L + D ++P + + G+
Sbjct: 242 TQKVVYISCGEEHTAVLTKSGGVFTFGAGSF------GQLGHDSMNDEVNPRRVLELMGS 295
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 296 --------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 342
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 112/241 (46%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H + L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 86
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ + + +++G G +GQLGH TT+ S +P +K+
Sbjct: 87 ----IIHVACGESHSLALSDQGQ--------LFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAISP 300
L Q + ++ V CG +H +++ G ++WG + GLG AS R ++ + I P
Sbjct: 135 LNQQM-ILQVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-P 192
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WGR +G LG D +P
Sbjct: 193 L---------------AQVAAGGAHSFALSLSG-AVFGWGRNNAGQLGLSDETDRQSPCH 236
Query: 361 V 361
V
Sbjct: 237 V 237
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG +++ + G S +P V VV
Sbjct: 191 IPLAQVAAGGAHSFALSLSGAVFGWGR----NNAGQLGLSDETDRQSPCHVKLLRTQKVV 246
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSP 189
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 YISCGEEHTAVLTKSGGVF--------TFGAGSFGQLGHDSMNDEVNPRRVLELMGSE-- 296
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 297 --VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 343
>gi|350407907|ref|XP_003488238.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Bombus
impatiens]
Length = 539
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 101/208 (48%), Gaps = 28/208 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW---DFHGHTVV 130
+ + GG SLA+ N G ++ WG+ S G +++S+ P P +G VV
Sbjct: 135 VVDIACGGHHSLALTNKGEIYAWGHNV---SGQVGCGTILSTVQPIPKLLNVGLNGKKVV 191
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CG VA+ +GE Y SWG N GQLGLG+ S++ P+ + TF +
Sbjct: 192 HISCGDSSSVAVTDSGEVY--------SWGHNGVGQLGLGNCTSQVEPQKVATF---AKI 240
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ +V CG HT L+ E + + +G GQLG T + +P ++ E+P+
Sbjct: 241 VIEKVVCGYMHTLALSD--------EGVLYVWGANSYGQLGLNTDSNVWIPTKL-EVPEM 291
Query: 251 VYLVSVDCGLF-HTSVVSSAGD-VWSWG 276
++ + + H S+ S G+ ++ WG
Sbjct: 292 GRILDIVTSHYHHISLAMSEGNRIFMWG 319
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/260 (25%), Positives = 110/260 (42%), Gaps = 41/260 (15%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G +V A G HV+AL G+ Y SWG N+ +LG
Sbjct: 66 STIYPKKIEALCGKSVKTFAYGKGPHVLALTEEGKVY--------SWGYNDYCELGNKST 117
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P ++ + D V ++ CG H+ LT++ + +G +GQ+G
Sbjct: 118 NEGLTPTLVPSVLDDK--FVVDIACGGHHSLALTNKGE--------IYAWGHNVSGQVGC 167
Query: 233 GTTQSAL--VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPN 286
GT S + +P+ + +V + CG + V+ +G+V+SWG + GLG C
Sbjct: 168 GTILSTVQPIPKLLNVGLNGKKVVHISCGDSSSVAVTDSGEVYSWGHNGVGQLGLGNC-- 225
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGV 346
S + + I+I +V CG HT+ ++D+G L+ WG G
Sbjct: 226 TSQVEPQKVATFAKIVIE-------------KVVCGYMHTLALSDEGV-LYVWGANSYGQ 271
Query: 347 LGTGKTIDFFAPAIVLWPPL 366
LG + + P + P +
Sbjct: 272 LGLNTDSNVWIPTKLEVPEM 291
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 94/214 (43%), Gaps = 27/214 (12%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+D + Y G N G LG GD +S + PK IE CG + K P
Sbjct: 44 KDDMVYGIGNNTYGCLGTGDTQSTIYPKKIEAL------------CGK-SVKTFAYGKGP 90
Query: 212 NDML---ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ + E +++G + +LG+ +T L P V + ++V + CG H+ +++
Sbjct: 91 HVLALTEEGKVYSWGYNDYCELGNKSTNEGLTPTLVPSVLDDKFVVDIACGGHHSLALTN 150
Query: 269 AGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI-LISGNGPHGPKFQDPVQVACGAAHTV 327
G++++WG + L+ + PI + G +G K V ++CG + +V
Sbjct: 151 KGEIYAWGHNVSGQVGCGTILS------TVQPIPKLLNVGLNGKKV---VHISCGDSSSV 201
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VTD G +++SWG G LG G P V
Sbjct: 202 AVTDSG-EVYSWGHNGVGQLGLGNCTSQVEPQKV 234
>gi|259490348|ref|NP_001159191.1| uncharacterized protein LOC100304276 [Zea mays]
gi|223942555|gb|ACN25361.1| unknown [Zea mays]
gi|414871691|tpg|DAA50248.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 480
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 119/291 (40%), Gaps = 91/291 (31%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACG EH A+ S G + +WGAN GQLG G +S PK +++ +
Sbjct: 65 IACGREHTAAVASDGSLF--------TWGANEFGQLGDGTEDSAKEPKKVKSLETE---F 113
Query: 192 VYEVTCGSFHTALLTHRKR------------------------------PNDML------ 215
V V+CG+ TA + + PN ++
Sbjct: 114 VKSVSCGAHCTAAVAEPRENDGTVSKSRLWVWGQNQGSDYPRLFWGAFTPNTVIKQVSCG 173
Query: 216 ---------ESMCWTFGLGENGQLGHGTTQSALVPEQV--------KELPQYVYLVSVDC 258
+ + +G E GQLG G T L +V + P+ V +V V C
Sbjct: 174 AVHVMALSEDGLLQAWGYNEYGQLGRGRTSQGLQGARVLNAYARFLDDAPEQVKIVRVSC 233
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD---------AISPILISGNGPH 309
G +HT+ +S G+V++WG+ +G + SL ++GD A+ I++
Sbjct: 234 GEYHTAAISENGEVYTWGLGS-MGQLGHCSL---QSGDNELIPRRVVALDGIVVG----- 284
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
V+CG H+ VT+ G L++WG G G LG G FF+ ++
Sbjct: 285 --------DVSCGGVHSCAVTEGG-ALYAWGGGHVGQLGVGPQGGFFSCSL 326
Score = 69.3 bits (168), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/222 (30%), Positives = 96/222 (43%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR------PKIIETFNQDS-PWAVYEVTCGSFHTALLTHRK 209
Y WG N++GQ +E LR PK+ + N S W ++ CG HTA +
Sbjct: 22 YIWGYNHSGQTARKGKECHLRIPKSLPPKLFKLGNGKSLRWT--DIACGREHTAAVAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G E GQLG GT SA P++VK L + ++ SV CG T+ V+
Sbjct: 78 ------DGSLFTWGANEFGQLGDGTEDSAKEPKKVKSL-ETEFVKSVSCGAHCTAAVAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G + R G +I QV+
Sbjct: 131 RENDGTVSKSRLWVWGQNQG------SDYPRLFWGAFTPNTVIK-------------QVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H + +++DG L +WG G LG G+T A VL
Sbjct: 172 CGAVHVMALSEDGL-LQAWGYNEYGQLGRGRTSQGLQGARVL 212
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 66/162 (40%), Gaps = 35/162 (21%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG---LGDRESRLRPKIIETFN 185
+V+V+CG H A+ GE Y +WG + GQLG L ++ L P+ + +
Sbjct: 228 IVRVSCGEYHTAAISENGEVY--------TWGLGSMGQLGHCSLQSGDNELIPRRVVALD 279
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----------- 234
V +V+CG H+ +T + +G G GQLG G
Sbjct: 280 ---GIVVGDVSCGGVHSCAVTE--------GGALYAWGGGHVGQLGVGPQGGFFSCSLNG 328
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ L V +P V L + CG HT V G ++ WG
Sbjct: 329 SDMLLRNIPVLVIPSGVRLAT--CGHSHTLVSMKDGRIYGWG 368
>gi|407003324|gb|EKE19915.1| hypothetical protein ACD_8C00086G0006 [uncultured bacterium]
Length = 2770
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 89/343 (25%), Positives = 127/343 (37%), Gaps = 75/343 (21%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ AG SLA+ + G W WG+ G S V+S P V G V V G
Sbjct: 691 ISAGEGHSLALRSDGTAWAWGDNAY---GMLGNNSTVTSSIPVQVSGLTG--VSSVKAGR 745
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H +AL S G ++WG N GQLG G RL P + V ++
Sbjct: 746 LHSMALKSDG--------TVWAWGYNTEGQLGDGSTTQRLVPVQVSGLED-----VIAIS 792
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G +H+ ++ + W +G NGQLG+ +T +LVP QV P + +
Sbjct: 793 AGDYHSMVIKS--------DGTVWAWGRNSNGQLGNNSTTGSLVPVQV---PGLTGVALI 841
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS------------ 304
G ++ V S G +WG LC +++ R P+ +
Sbjct: 842 SAGTNTSAAVKSDGTALAWGSNTYGQLCDGSNIQRLIPVQVSEPVGVGALSMVVANSHSL 901
Query: 305 -----------GNGPHGPKFQD-------PVQ---------VACGAAHTVLVTDDGYKLW 337
G +GP + PVQ ++ G H++ + DG +W
Sbjct: 902 ILKLDGTVWGCGRNDYGPIGNNSITDSKVPVQTLGLAGVVSISAGLYHSMALKSDG-TIW 960
Query: 338 SWGRGRSGVLGTGKTIDFFAP-AIVLWPPLTEEFKQDELNTGG 379
WG G LG T AP A W F D LN GG
Sbjct: 961 GWGYNGYGQLGDNSTTSRLAPVASKRW-----FFPDDYLNLGG 998
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 121/305 (39%), Gaps = 49/305 (16%)
Query: 60 LEDDSKTNHKAPIKI----CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS 115
L ++S T P+++ S+ AG SLA+ + G +W WG G S + S
Sbjct: 350 LGNNSITQSLVPVQVLTGVASISAGYDYSLAVKSDGTVWAWGRNYY---GQFGNNSTIDS 406
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V G T + + H +AL S G + WG N+ GQLG
Sbjct: 407 LVPIQVSGLTGVTSISATSSNNYSHSLALKSDG--------TVWGWGYNSTGQLGNNSAT 458
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
L P ++ V ++ GS H+ L + W +G +GQLG+
Sbjct: 459 QSLVP--VQALGLT---GVVSISAGSNHSMALKS--------DGTAWIWGGNSDGQLGNN 505
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T +LVP QV P + ++ G +H+ + S G VW+WG L N++
Sbjct: 506 STAQSLVPVQV---PGLSGVSAISAGNYHSMALKSDGTVWAWGRNSSGQLGNNSTTV--- 559
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
++ PI + V+ G H++ + DG +W WG + + +
Sbjct: 560 ---SLVPIQV---------LTGTTSVSAGTYHSMALKSDG-AVWGWGNNEYKKIISNTNL 606
Query: 354 DFFAP 358
D P
Sbjct: 607 DQLVP 611
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 78/301 (25%), Positives = 114/301 (37%), Gaps = 57/301 (18%)
Query: 72 IKICSVKAGGMM--SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS------PVWD 123
IK + +GG SLA+ + +W WG GG ++ + T PV D
Sbjct: 634 IKSIATSSGGSYGYSLALKSDKTVWAWG---------YGGSGVLGNGTGEQMLVGYPVRD 684
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
G V +++ G H +AL S G ++WG N G LG + P +
Sbjct: 685 LTG--VEQISAGEGHSLALRSDG--------TAWAWGDNAYGMLGNNSTVTSSIPVQVSG 734
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
V V G H+ L + W +G GQLG G+T LVP Q
Sbjct: 735 LT-----GVSSVKAGRLHSMALKS--------DGTVWAWGYNTEGQLGDGSTTQRLVPVQ 781
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V L ++++ G +H+ V+ S G VW+WG N L N ++ P+ +
Sbjct: 782 VSGLED---VIAISAGDYHSMVIKSDGTVWAWGRNS------NGQLGNNSTTGSLVPVQV 832
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLW 363
P ++ G + V DG L +WG G L G I P V
Sbjct: 833 -------PGLTGVALISAGTNTSAAVKSDGTAL-AWGSNTYGQLCDGSNIQRLIPVQVSE 884
Query: 364 P 364
P
Sbjct: 885 P 885
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 119/312 (38%), Gaps = 53/312 (16%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S N P+++ ++ A S+A+ + G LW WG + G S+
Sbjct: 300 LGDGSTINRIVPVQVSGLTEVSAISAAFGHSMALKSDGTLWTWG---YNNRGQLGNNSIT 356
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLG 170
S P V+V G VA +SAG Y D ++WG N GQ G
Sbjct: 357 QSLVP-----------VQVLTG----VASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNN 401
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
L P I+ ++ + ++ +L + W +G GQL
Sbjct: 402 STIDSLVP--IQVSGLTGVTSISATSSNNYSHSLALKS-------DGTVWGWGYNSTGQL 452
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+ + +LVP Q L +VS+ G H+ + S G W WG + L
Sbjct: 453 GNNSATQSLVPVQALGLTG---VVSISAGSNHSMALKSDGTAWIWGGNS------DGQLG 503
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
N ++ P+ + P ++ G H++ + DG +W+WGR SG LG
Sbjct: 504 NNSTAQSLVPVQV-------PGLSGVSAISAGNYHSMALKSDG-TVWAWGRNSSGQLGNN 555
Query: 351 KTIDFFAPAIVL 362
T P VL
Sbjct: 556 STTVSLVPIQVL 567
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 74/293 (25%), Positives = 110/293 (37%), Gaps = 49/293 (16%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNC---PLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
K V AG +LA+ + G +W WG L D ST ++ P V +
Sbjct: 269 KYAQVVAGYYHNLALKSDGTVWAWGYNYYGRLGDGST------INRIVPVQVSGLTEVSA 322
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ A G H +AL S G ++WG NN GQLG L P + T
Sbjct: 323 ISAAFG--HSMALKSDG--------TLWTWGYNNRGQLGNNSITQSLVPVQVLT------ 366
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ G ++ + + W +G GQ G+ +T +LVP QV L
Sbjct: 367 -GVASISAGYDYSLAVKS--------DGTVWAWGRNYYGQFGNNSTIDSLVPIQVSGLTG 417
Query: 250 YVYLVSVDCGLF-HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + H+ + S G VW WG L N A ++ P+ G
Sbjct: 418 VTSISATSSNNYSHSLALKSDGTVWGWGYNS------TGQLGNNSATQSLVPVQALG--- 468
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V ++ G+ H++ + DG W WG G LG T P V
Sbjct: 469 ----LTGVVSISAGSNHSMALKSDG-TAWIWGGNSDGQLGNNSTAQSLVPVQV 516
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 98/246 (39%), Gaps = 49/246 (19%)
Query: 60 LEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D S T P+++ ++ AG S+ I + G +W WG N L ++ST G
Sbjct: 768 LGDGSTTQRLVPVQVSGLEDVIAISAGDYHSMVIKSDGTVWAWGRNSNGQLGNNSTTG-- 825
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG---EDLVCYSWGANNNGQL 167
S P V G VAL+SAG D +WG+N GQL
Sbjct: 826 ----SLVPVQVPGLTG-------------VALISAGTNTSAAVKSDGTALAWGSNTYGQL 868
Query: 168 GLGDRESRLRPKIIETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
G RL P + P V + + H+ +L L+ W G
Sbjct: 869 CDGSNIQRLIPVQVS-----EPVGVGALSMVVANSHSLIL--------KLDGTVWGCGRN 915
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
+ G +G+ + + VP Q L +VS+ GL+H+ + S G +W WG L
Sbjct: 916 DYGPIGNNSITDSKVPVQTLGLAG---VVSISAGLYHSMALKSDGTIWGWGYNGYGQLGD 972
Query: 286 NASLTR 291
N++ +R
Sbjct: 973 NSTTSR 978
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 94/237 (39%), Gaps = 44/237 (18%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+V G H +AL S G ++WG N G+LG G +R+ P + +
Sbjct: 271 AQVVAGYYHNLALKSDG--------TVWAWGYNYYGRLGDGSTINRIVPVQVSGLTE--- 319
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ H+ L + WT+G GQLG+ + +LVP QV
Sbjct: 320 --VSAISAAFGHSMALKS--------DGTLWTWGYNNRGQLGNNSITQSLVPVQV----- 364
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ S+ G ++ V S G VW+WG N+++ D++ PI +SG
Sbjct: 365 LTGVASISAGYDYSLAVKSDGTVWAWGRNYYGQFGNNSTI------DSLVPIQVSG---- 414
Query: 310 GPKFQDPVQVACGA----AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
++ + +H++ + DG +W WG +G LG P L
Sbjct: 415 ---LTGVTSISATSSNNYSHSLALKSDG-TVWGWGYNSTGQLGNNSATQSLVPVQAL 467
Score = 38.9 bits (89), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 49/123 (39%), Gaps = 17/123 (13%)
Query: 62 DDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWM------WGNCPLPDSSTEGGFSLVSS 115
D S P+++ G +S+ + N+ +L + WG C D G S+ S
Sbjct: 870 DGSNIQRLIPVQVSEPVGVGALSMVVANSHSLILKLDGTVWG-CGRNDYGPIGNNSITDS 928
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P G VV ++ G H +AL S G + WG N GQLG SR
Sbjct: 929 KVPVQTLGLAG--VVSISAGLYHSMALKSDG--------TIWGWGYNGYGQLGDNSTTSR 978
Query: 176 LRP 178
L P
Sbjct: 979 LAP 981
>gi|340503755|gb|EGR30283.1| hypothetical protein IMG5_135970 [Ichthyophthirius multifiliis]
Length = 361
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 54/233 (23%), Positives = 105/233 (45%), Gaps = 34/233 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+++++CG+ +AL +D + +SWG N+ G LGLG ES P+++ + D+
Sbjct: 25 IIQISCGTNFCLALT--------QDFLVFSWGDNSYGNLGLGHLESSHLPQLVRFLDNDN 76
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ ++CG +H+A + + +T+GLG GQLG G + P+ V+
Sbjct: 77 I-KIQHISCGQYHSAATSKTGQ--------VFTWGLGNFGQLGKGNLANFNQPDLVRGDL 127
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG--- 305
+ +++ CG +H ++ G +SWG C ++ + P++++
Sbjct: 128 EGKNILATVCGGYHNVCFTNEGYTYSWG-------CLEVDQQNIKSSNIPYPMMLNSEFI 180
Query: 306 ---NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
N P F + A + + +++WGR + G LG G +F
Sbjct: 181 KEENNP----FNMIITYIAAGADYCMAIEQKRIIYAWGRNKEGQLGIGGISNF 229
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 67 NHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT--PSPVWDF 124
N+ + I + AG +AI+ ++ WG + + G +S+F PS V
Sbjct: 184 NNPFNMIITYIAAGADYCMAIEQKRIIYAWGR----NKEGQLGIGGISNFVDQPSKVQGL 239
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIET 183
G+ + +ACG EH + L +G ++ G++ +G+LGLG R + L P+ I
Sbjct: 240 DGNLMKSIACGEEHSLFLTESGRI--------FACGSSKDGKLGLGIRNTILMTPQEINI 291
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPN------DMLES----MCWTFGLGENGQLGHG 233
V ++ CGS H+ L K + LE+ + +T+G G +LGHG
Sbjct: 292 -----KAKVVKIACGSTHSMALAINKEVEQNQDEYEYLEAKETKVIYTWGNGWESKLGHG 346
Query: 234 TTQSALVPEQ 243
+ P++
Sbjct: 347 DKDNLDTPQK 356
Score = 46.2 bits (108), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 64/302 (21%), Positives = 112/302 (37%), Gaps = 31/302 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW-DFHGHTVV 130
IKI + G S A G ++ WG L + G +L + P V D G ++
Sbjct: 77 IKIQHISCGQYHSAATSKTGQVFTWG---LGNFGQLGKGNLANFNQPDLVRGDLEGKNIL 133
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE----SRLRPKIIETFNQ 186
CG H V + G T YSWG Q + L + I+ N
Sbjct: 134 ATVCGGYHNVCFTNEGYT--------YSWGCLEVDQQNIKSSNIPYPMMLNSEFIKEENN 185
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVK 245
+ + G+ + + ++ + + +G + GQLG G + + P +V+
Sbjct: 186 PFNMIITYIAAGADYCMAIEQKR--------IIYAWGRNKEGQLGIGGISNFVDQPSKVQ 237
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPI 301
L + + S+ CG H+ ++ +G +++ G K GLG+ +T E +
Sbjct: 238 GLDGNL-MKSIACGEEHSLFLTESGRIFACGSSKDGKLGLGIRNTILMTPQEINIKAKVV 296
Query: 302 LISGNGPHGPKFQDPVQVACGA-AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
I+ H +V + L + +++WG G LG G + P
Sbjct: 297 KIACGSTHSMALAINKEVEQNQDEYEYLEAKETKVIYTWGNGWESKLGHGDKDNLDTPQK 356
Query: 361 VL 362
L
Sbjct: 357 FL 358
Score = 38.9 bits (89), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 52/123 (42%), Gaps = 18/123 (14%)
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAI 298
Q EL Q + ++ + CG ++ V+SWG GLG ++ L
Sbjct: 15 QNNELEQNIGIIQISCGTNFCLALTQDFLVFSWGDNSYGNLGLGHLESSHL--------- 65
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P L+ K Q ++CG H+ + G ++++WG G G LG G +F P
Sbjct: 66 -PQLVRFLDNDNIKIQ---HISCGQYHSAATSKTG-QVFTWGLGNFGQLGKGNLANFNQP 120
Query: 359 AIV 361
+V
Sbjct: 121 DLV 123
>gi|145594515|ref|YP_001158812.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
gi|145303852|gb|ABP54434.1| regulator of chromosome condensation, RCC1 [Salinispora tropica
CNB-440]
Length = 554
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/319 (28%), Positives = 127/319 (39%), Gaps = 56/319 (17%)
Query: 60 LEDDSKTNHKAPIK--------ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEG 108
L D + T+ P+ I ++ AG SLA+ + GA+ WG N L D +T
Sbjct: 122 LGDGTTTDRSTPVTVGLPAGTTITALAAGRRHSLALTDTGAVLAWGSNSNGQLGDGTTT- 180
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ TP V G T+ +A S + +AL G +WG+N+ GQLG
Sbjct: 181 -----ARSTPVTVGLPAGTTITALAA-STYSLALTDTGA--------ALAWGSNSRGQLG 226
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT---HRKRPNDMLESMCWTFGLG 225
G R P + + G+ TAL H D + W G
Sbjct: 227 DGTTTDRSTPVTVS------------LPAGTTITALAASYDHSLALTDTGAVLAW--GSN 272
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
NGQLG GTT + P V LP + ++ G HT V++SAG V +WG
Sbjct: 273 SNGQLGDGTTTNRSTPVTVG-LPAGTTITALAAGRSHTLVLTSAGAVLAWGSNS------ 325
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N L D +P+ + P +A G H++ +TD G L +WG G
Sbjct: 326 NGQLGDGTTTDRSTPVTVGL-----PAGTTITALAAGYYHSLALTDTGAVL-AWGGNSYG 379
Query: 346 VLGTGKTIDFFAPAIVLWP 364
LG G T D P V P
Sbjct: 380 QLGDGTTTDRSTPVTVGLP 398
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 81/210 (38%), Gaps = 25/210 (11%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+WG N +GQLG G +R P T + + + G H+ LT D
Sbjct: 58 TVLAWGDNFSGQLGDGTTTARSTPV---TVGLPAGTTITALAAGGSHSLALT------DT 108
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W G GQLG GTT P V LP + ++ G H+ ++ G V +
Sbjct: 109 GVVLAW--GSNSRGQLGDGTTTDRSTPVTVG-LPAGTTITALAAGRRHSLALTDTGAVLA 165
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG L + R+ +P+ + G + + +++ +TD G
Sbjct: 166 WGSNSNGQLGDGTTTARS------TPVTV------GLPAGTTITALAASTYSLALTDTGA 213
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
L +WG G LG G T D P V P
Sbjct: 214 AL-AWGSNSRGQLGDGTTTDRSTPVTVSLP 242
>gi|414878660|tpg|DAA55791.1| TPA: putative regulator of chromosome condensation (RCC1) family
protein [Zea mays]
Length = 964
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 79/293 (26%), Positives = 135/293 (46%), Gaps = 36/293 (12%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ +G L+ WG+ G + VS + P V G V ++CG
Sbjct: 240 VACGEYHTCAVTLSGDLYTWGDGTF-KFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCG 298
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G + G LG GDRES P+ +E+
Sbjct: 299 PWHTALVTSAGQ--------LFTFGDGSFGVLGHGDRESISVPREVESLKG---LRTVRA 347
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA +++ ++ +T+G G+ G+LGHG + LVP V L +
Sbjct: 348 ACGVWHTAAVVEVMSVNSNSSNCSSGKIFTWGDGDKGRLGHGDKEPKLVPTCVAALVEPN 407
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V CG T ++++G V++ G + LG N D + P+ + G
Sbjct: 408 F-CQVACGHCLTVALTTSGHVYTMGSAVYGQLG---------NAQADGMLPVRVEGK--- 454
Query: 310 GPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+++ V+ ++CGA H ++T ++++WG+G +G LG G T D P +V
Sbjct: 455 --LYKNFVEEISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTEDKNTPTLV 504
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 31/180 (17%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G ++ WG+ D G P+ V +VACG VAL ++G Y
Sbjct: 373 GKIFTWGDG---DKGRLGHGDKEPKLVPTCVAALVEPNFCQVACGHCLTVALTTSGHVY- 428
Query: 151 GEDLVCYSWGANNNGQLGLGDRES----RLRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
+ G+ GQLG + R+ K+ + F V E++CG++H A+LT
Sbjct: 429 -------TMGSAVYGQLGNAQADGMLPVRVEGKLYKNF-------VEEISCGAYHVAVLT 474
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
R + +T+G G NG+LGHG T+ P V+ L + +V CG+ T+ +
Sbjct: 475 SR--------TEVYTWGKGANGRLGHGDTEDKNTPTLVEALKDK-QVRNVVCGINFTAAI 525
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 87/209 (41%), Gaps = 32/209 (15%)
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
+ G R + L K + + S + V CG +HT +T L +T+G G
Sbjct: 211 NISCGGRHAALVTKQAKLIDALSHMNIELVACGEYHTCAVT--------LSGDLYTWGDG 262
Query: 226 --ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
+ G LGHG S VP+ V + +++ S+ CG +HT++V+SAG ++++G + G+
Sbjct: 263 TFKFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCGPWHTALVTSAGQLFTFG-DGSFGV 321
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------D 332
+ + + K V+ ACG HT V +
Sbjct: 322 LGHGDRESISVPREVESL----------KGLRTVRAACGVWHTAAVVEVMSVNSNSSNCS 371
Query: 333 GYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K+++WG G G LG G P V
Sbjct: 372 SGKIFTWGDGDKGRLGHGDKEPKLVPTCV 400
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVW---DFHGHTVV 130
C V G +++A+ +G ++ G S+ G + PV + + V
Sbjct: 408 FCQVACGHCLTVALTTSGHVYTMG------SAVYGQLGNAQADGMLPVRVEGKLYKNFVE 461
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++CG+ HV L S E Y +WG NG+LG GD E + P ++E
Sbjct: 462 EISCGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTEDKNTPTLVEALKDKQ-- 511
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V V CG TA + K + + +SMC
Sbjct: 512 -VRNVVCGINFTAAICIHKWVSGVDQSMC 539
>gi|147899463|ref|NP_001085604.1| HECT and RLD domain containing E3 ubiquitin protein ligase 3
[Xenopus laevis]
gi|49256123|gb|AAH73004.1| MGC82587 protein [Xenopus laevis]
Length = 1050
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 93/359 (25%), Positives = 155/359 (43%), Gaps = 59/359 (16%)
Query: 20 PFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIG--APDSLEDDSKTNHKAPI----- 72
P C SL C+ ++ G ++L Q + G L + H AP+
Sbjct: 25 PCACTFSLATCVK-EVACGGKHTLFLMEDGQVYSCGWNGEGQLGHSHEGTHPAPVATLAE 83
Query: 73 -KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT--PSPVWDFHGHTV 129
I + G SLA+ G L+ WG + + G + V ++ P + +
Sbjct: 84 EHIKHIACGQSHSLALSLQGNLYSWG----AGNDGQLGHATVEHYSRIPRIIKKLSQQKI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDS 188
+++CG +H +AL G+D ++WG N +GQLGLG+ S+ P+ +++ +
Sbjct: 140 QQMSCGDDHCLAL--------GDDGQLFTWGQNTHGQLGLGNGFISQSSPQKVKSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +VT G H+ L+ L + +G GQLG L EQVKE P
Sbjct: 191 PLA--QVTAGGSHSFALS--------LSGAVFGWGKNSAGQLG-------LNDEQVKETP 233
Query: 249 QYVY------LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
+V +V + CG HT++++ AG ++++G G G + SL + ++
Sbjct: 234 CHVKPLRTHKVVYISCGEEHTAILTKAGGLFTFG-AGGSGQLGHDSLHNEINPRRVLELM 292
Query: 303 ISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
S + Q+ACG HT+ L+++G G G LGTG + P +V
Sbjct: 293 GS----------EVSQIACGRKHTLAFVPSSGTLYAFGCGDLGQLGTGHENNVKCPTVV 341
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG +S+ + G + TP V H VV
Sbjct: 190 IPLAQVTAGGSHSFALSLSGAVFGWGK----NSAGQLGLNDEQVKETPCHVKPLRTHKVV 245
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSP 189
++CG EH L AG +++GA +GQLG + + P+ ++E +
Sbjct: 246 YISCGEEHTAILTKAGG--------LFTFGAGGSGQLGHDSLHNEINPRRVLELMGSE-- 295
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + FG G+ GQLG G + P VK
Sbjct: 296 --VSQIACGRKHTLAFV----PSS---GTLYAFGCGDLGQLGTGHENNVKCPTVVK 342
>gi|445493754|ref|ZP_21460798.1| hypothetical protein Jab_1c00440 [Janthinobacterium sp. HH01]
gi|444789915|gb|ELX11462.1| hypothetical protein Jab_1c00440 [Janthinobacterium sp. HH01]
Length = 471
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/313 (27%), Positives = 130/313 (41%), Gaps = 66/313 (21%)
Query: 60 LEDDSKTNHKAPIKICS-------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
L D + N AP+ + V G ++AI G LW WG G +
Sbjct: 155 LGDSTTINRSAPVLVSGGGTSWKQVALGDQFAVAIRTDGTLWAWG---YNQDGQLGDGTQ 211
Query: 113 VSSFTPSPV-----WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
++ P+ + W+ VA G H +A+ ++G Y+WG N+ GQL
Sbjct: 212 INRTAPTQIGKDKDWNL-------VAAGKAHALAVKTSG--------ALYAWGRNDRGQL 256
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G G +R P I W+ ++ G HT + ++ ND+ +G G N
Sbjct: 257 GDGTAINRTAPLKIGIL----LWSA--ISAGETHTMAI--QRDTNDL-------YGWGGN 301
Query: 228 --GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
GQ+G+ P ++ L S+ G FHT+ ++++G +++WG L
Sbjct: 302 TYGQVGNLLKVDVPAPVKIGTLK----WTSLSAGAFHTTAITNSGTLYAWGQNTYGQLGN 357
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
N SL D SP I + + Q+A G HT+ + +DG LWSWG G
Sbjct: 358 NGSL------DLTSPAQIGTD-------SNWSQIAAGTQHTLGLRNDG-TLWSWGANTEG 403
Query: 346 VLGTGKTIDFFAP 358
LGTG T D P
Sbjct: 404 QLGTGGT-DVVTP 415
Score = 55.1 bits (131), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 74/295 (25%), Positives = 119/295 (40%), Gaps = 61/295 (20%)
Query: 76 SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
SV AGG ++A G L+ WG L DS+T ++ P V G + +V
Sbjct: 127 SVVAGGYQTIARKADGNLYSWGENIKGQLGDSTT------INRSAPVLV-SGGGTSWKQV 179
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G + VA+ + D ++WG N +GQLG G + +R P I +D W +
Sbjct: 180 ALGDQFAVAIRT--------DGTLWAWGYNQDGQLGDGTQINRTAPTQI---GKDKDWNL 228
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V G H + + +G + GQLG GT + P ++ L
Sbjct: 229 --VAAGKAHALAV--------KTSGALYAWGRNDRGQLGDGTAINRTAPLKIGIL----L 274
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG-----DAISPILISGN 306
++ G HT ++ D++ WG T + G D +P+ I
Sbjct: 275 WSAISAGETHTMAIQRDTNDLYGWGGN-----------TYGQVGNLLKVDVPAPVKIG-- 321
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ GA HT +T+ G L++WG+ G LG ++D +PA +
Sbjct: 322 ------TLKWTSLSAGAFHTTAITNSG-TLYAWGQNTYGQLGNNGSLDLTSPAQI 369
>gi|350596671|ref|XP_003361480.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like, partial
[Sus scrofa]
Length = 2561
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 1705 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 1761
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ + ++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 1762 SDGKLF--------TFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 1810
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P++V L + + V CG +
Sbjct: 1811 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKVDVLCG-IGIKKVACGTQFS 1862
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 1863 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVVIED---VAVGA 1911
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + G +++WG G LG G T P +V
Sbjct: 1912 EHTLALASTG-DVYAWGSNSEGQLGLGHTNHVREPTLV 1948
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 60/143 (41%), Gaps = 20/143 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 1850 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVV 1903
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 1904 IEDVAVGAEHTLALASTGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTVLQGKN 1955
Query: 189 PWAVYEVTCGSFHTALLTHRKRP 211
V +++ G H+A T P
Sbjct: 1956 ---VRQISAGRCHSAAWTAPPVP 1975
>gi|150026491|ref|YP_001297317.1| RCC1 repeat-containing protein [Flavobacterium psychrophilum
JIP02/86]
gi|149773032|emb|CAL44516.1| RCC1 (Regulator of Chromosome Condensation) repeat domain protein
[Flavobacterium psychrophilum JIP02/86]
Length = 456
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/326 (26%), Positives = 133/326 (40%), Gaps = 64/326 (19%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGF 110
L D S TN PI+I + + AG +AI G LW WG+ L D++T
Sbjct: 104 LGDGSTTNSNIPIQIGTATNWRFITAGDEYVIAIKLDGTLWAWGDNTYGQLGDNTT---- 159
Query: 111 SLVSSFTPSPV-----WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
V+ P+ + W + V+ G+ H +A + G ++WG NN G
Sbjct: 160 --VNKIVPTQIGSDTDW-------LLVSAGTNHTLATKTNG--------TLWAWGRNNTG 202
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
QLG +++ P I DS W V H+A + WT+G
Sbjct: 203 QLGDNTTLNKIIPTQI---GADSDWQ--NVMASILHSAATKS--------DGSIWTWGNN 249
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
NGQLG GT ++P + + ++ G HT S G +W+WG G
Sbjct: 250 TNGQLGDGTVVGKIIPVNITTVTNCNWIAK---GHQHTIAKKSDGSLWAWGGNAS-GQLG 305
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSG 345
+AS T+ SP+ +SG D + V +HT+ + +DG L++WG G
Sbjct: 306 DASTTQKN-----SPVAVSG------LTTDWLTVNSKLSHTIALKNDG-TLYTWGANLYG 353
Query: 346 VLGTGKTIDFFAPAIVLWPPLTEEFK 371
LG I P ++ P L + K
Sbjct: 354 QLGDASNIAKDIPTLITCPFLAIDEK 379
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 108/283 (38%), Gaps = 41/283 (14%)
Query: 76 SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACG 135
SV AGG SL I G LW WG T G ++F+ P+ +A G
Sbjct: 24 SVSAGGSHSLGIRTGGTLWSWGRNYFGQLGTAG---TPATFSNIPIQVGTATNWQTIAAG 80
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
+ H VA+ + G ++WG N QLG G + P I T + W +
Sbjct: 81 NAHNVAIKTNG--------TLWTWGHNQASQLGDGSTTNSNIPIQIGT---ATNWRF--I 127
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVS 255
T G + + L+ W +G GQLG TT + +VP Q+ ++
Sbjct: 128 TAGDEYVIAI--------KLDGTLWAWGDNTYGQLGDNTTVNKIVPTQIGSDTDWLL--- 176
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
V G HT + G +W+WG L N +L + I P I + D
Sbjct: 177 VSAGTNHTLATKTNGTLWAWGRNNTGQLGDNTTLNK------IIPTQIGAD-------SD 223
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
V H+ DG +W+WG +G LG G + P
Sbjct: 224 WQNVMASILHSAATKSDG-SIWTWGNNTNGQLGDGTVVGKIIP 265
>gi|115374764|ref|ZP_01462040.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|115368241|gb|EAU67200.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 750
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 125/305 (40%), Gaps = 46/305 (15%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + P+ + +V AG SLA+ G +W WG+ + G +
Sbjct: 429 LGDGTTRRREVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDN---EYGQVGDGTET 485
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V + G V VA G H + L S D ++WG N+ GQLG G
Sbjct: 486 SRKAPVRVPNLGGG--VAVAAGENHSLVLRS--------DGTVWAWGGNHYGQLGNGITS 535
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ + V G +++ L R + W +GL GQLG G
Sbjct: 536 DSPVPVQVQGLSGG-----VAVAAGQYYS--LAVRS------DGTVWAWGLNFEGQLGDG 582
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T + VP +V ++P V+V G H VV S G VW+WG + A R
Sbjct: 583 TASDSPVPVRV-QVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRR-- 639
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ P+ + G + + VA G H++ V DG +W+WG +GVLG G T
Sbjct: 640 ---VLMPVQVQG-------LSEGMAVAAGYNHSLAVRSDG-SVWAWGGNTAGVLGDGTTD 688
Query: 354 DFFAP 358
P
Sbjct: 689 RRTVP 693
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 122/288 (42%), Gaps = 42/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V AG +SLA+ G +W WG +S G + + + PV V V
Sbjct: 298 VEAVAAGHSLSLAVRFDGTVWAWGG----NSYGALGNDTIETMSTVPVQVPGLSGGVTVV 353
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
S H +A+ S D ++WG N+ GQLG G RL ++ + V
Sbjct: 354 AASSHALAVRS--------DGTVWAWGGNHYGQLGDGTTSERLVAVPVQGLS-----GVM 400
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V H+ L R ++ W +G GQLG GTT+ VP V P+ +
Sbjct: 401 AVAARQEHS--LAVRS------DATVWAWGRNYEGQLGDGTTRRREVPVPV---PKLSSV 449
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V+V G +H+ V G VW+WG + G + + T +A P+ + P
Sbjct: 450 VAVAAGRYHSLAVRFDGTVWAWGDNE-YGQVGDGTETSRKA-----PVRV-------PNL 496
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V VA G H++++ DG +W+WG G LG G T D P V
Sbjct: 497 GGGVAVAAGENHSLVLRSDG-TVWAWGGNHYGQLGNGITSDSPVPVQV 543
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 123/316 (38%), Gaps = 55/316 (17%)
Query: 61 EDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFS 111
D +T P+++ +V A +LA+ + G +W WG L D +T
Sbjct: 330 NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTS---- 385
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
PV G V+ VA EH +A+ S D ++WG N GQLG G
Sbjct: 386 --ERLVAVPVQGLSG--VMAVAARQEHSLAVRS--------DATVWAWGRNYEGQLGDGT 433
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R P + + +V V G +H+ + + W +G E GQ+G
Sbjct: 434 TRRREVPVPVPKLS-----SVVAVAAGRYHSLAV--------RFDGTVWAWGDNEYGQVG 480
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GT S P +V P V+V G H+ V+ S G VW+WG L
Sbjct: 481 DGTETSRKAPVRV---PNLGGGVAVAAGENHSLVLRSDGTVWAWGGNH------YGQLGN 531
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
D+ P+ + G V VA G +++ V DG +W+WG G LG G
Sbjct: 532 GITSDSPVPVQVQG-------LSGGVAVAAGQYYSLAVRSDG-TVWAWGLNFEGQLGDGT 583
Query: 352 TIDFFAPAIVLWPPLT 367
D P V P L+
Sbjct: 584 ASDSPVPVRVQVPGLS 599
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 113/280 (40%), Gaps = 47/280 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ +V A SLA+ + +W WG L D +T P PV +VV
Sbjct: 399 VMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTR------RREVPVPVPKLS--SVV 450
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA G H +A+ D ++WG N GQ+G G SR P +
Sbjct: 451 AVAAGRYHSLAVR--------FDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGG--- 499
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V G H+ +L + W +G GQLG+G T + VP QV+ L
Sbjct: 500 --VAVAAGENHSLVLRS--------DGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLSGG 549
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V+V G +++ V S G VW+WG+ L A D+ P+ +
Sbjct: 550 ---VAVAAGQYYSLAVRSDGTVWAWGLNF------EGQLGDGTASDSPVPVRV-----QV 595
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P V VA G +H ++V DG +W+WG G +G G
Sbjct: 596 PGLSGGVAVAAGTSHALVVRSDG-TVWAWGSNYDGQVGEG 634
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 116/282 (41%), Gaps = 49/282 (17%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+V AGG+ SLA+ + G +W WG+ L D +T S P V G VV
Sbjct: 148 VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTN------VSLVPVRVKKLTG--VVA 199
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G +H +A+ S D ++WG N G LG G SR P ++ +
Sbjct: 200 VAAGEKHSLAVRS--------DGTVWTWGFNGYGALGDGTTSSRKVPVQVQGLSGG---- 247
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQY 250
V G +H+ L R + W +G GQLG GT + LVP Q + L
Sbjct: 248 -VAVAGGVYHS--LAVRS------DGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSG- 297
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +V G + V G VW+WG G N ++ + P+ +
Sbjct: 298 --VEAVAAGHSLSLAVRFDGTVWAWGGNS-YGALGNDTIETM----STVPVQV------- 343
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P V V ++H + V DG +W+WG G LG G T
Sbjct: 344 PGLSGGVTVVAASSHALAVRSDG-TVWAWGGNHYGQLGDGTT 384
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 48/298 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+ D ++T+ KAP+++ +V AG SL + + G +W WG +
Sbjct: 479 VGDGTETSRKAPVRVPNLGGGVAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNG-----I 533
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+S +P PV V VA G + +A+ S D ++WG N GQLG G
Sbjct: 534 TSDSPVPVQVQGLSGGVAVAAGQYYSLAVRS--------DGTVWAWGLNFEGQLGDGTAS 585
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ V G+ H ++ + W +G +GQ+G G
Sbjct: 586 DSPVPVRVQVPGLSGG---VAVAAGTSHALVVRS--------DGTVWAWGSNYDGQVGEG 634
Query: 234 T-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
+ L+P QV+ L + + +V G H+ V S G VW+WG G+ + + R
Sbjct: 635 APRRRVLMPVQVQGLSEGM---AVAAGYNHSLAVRSDGSVWAWGGNT-AGVLGDGTTDRR 690
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + G G + VA G +H++++ DG W+ G SG +G G
Sbjct: 691 T-------VPVQAQGLTGAR-----AVAAGESHSLVLRSDGTG-WAMGSNASGQIGDG 735
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 88/222 (39%), Gaps = 39/222 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VA G+ H +AL S G + C Q G G P + +
Sbjct: 98 VVAVAVGAYHSLALRSDGTVWAVGRAAC---------QGGDGTASDCTVPAPVPGLSGG- 147
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V G H+ L + W +G GQLG GTT +LVP +VK+L
Sbjct: 148 ----VAVAAGGLHSLALRS--------DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKL- 194
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+V+V G H+ V S G VW+WG G G + + + + P+ + G
Sbjct: 195 --TGVVAVAAGEKHSLAVRSDGTVWTWGF-NGYGALGDGTTSSRKV-----PVQVQG--- 243
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
V VA G H++ V DG +W WG G LG G
Sbjct: 244 ----LSGGVAVAGGVYHSLAVRSDG-TVWGWGANGVGQLGDG 280
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/328 (27%), Positives = 124/328 (37%), Gaps = 72/328 (21%)
Query: 31 MDGQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
+GQLG +N SLVP +++ + +V AG SLA+ +
Sbjct: 173 FEGQLGDGTTNVSLVPVRVKKL--------------------TGVVAVAAGEKHSLAVRS 212
Query: 90 AGALWMW---GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
G +W W G L D +T S P V G V VA G H +A+ S
Sbjct: 213 DGTVWTWGFNGYGALGDGTTS------SRKVPVQVQGLSGG--VAVAGGVYHSLAVRS-- 262
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
D + WGAN GQLG G R L P + + V V G H+ L
Sbjct: 263 ------DGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLS-----GVEAVAAG--HSLSL 309
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTS 264
R + W +G G LG+ T ++ + VP QV L V +V+ H
Sbjct: 310 AVR------FDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSGGVTVVAASS---HAL 360
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
V S G VW+WG L + + + + G + VA
Sbjct: 361 AVRSDGTVWAWGGNH------YGQLGDGTTSERLVAVPVQG-------LSGVMAVAARQE 407
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
H++ V D +W+WGR G LG G T
Sbjct: 408 HSLAVRSD-ATVWAWGRNYEGQLGDGTT 434
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +GEN GQLG GTT VP QV+ L +V+V G +H+ + S G VW+
Sbjct: 68 WAVGENVFGQLGDGTTSERRVPVQVQGLSG---VVAVAVGAYHSLALRSDGTVWA----V 120
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G C T A D P + P V VA G H++ + DG +W+W
Sbjct: 121 GRAACQGGDGT---ASDCTVPAPV-------PGLSGGVAVAAGGLHSLALRSDG-TVWAW 169
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P V
Sbjct: 170 GSNFEGQLGDGTTNVSLVPVRV 191
>gi|195336543|ref|XP_002034895.1| GM14399 [Drosophila sechellia]
gi|194127988|gb|EDW50031.1| GM14399 [Drosophila sechellia]
Length = 1058
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 126/323 (39%), Gaps = 58/323 (17%)
Query: 62 DDSKTNHKAPIK------------ICSVKAGGMMSLAIDNAGALWMWGN--CPLPDSSTE 107
D S+ H P K I + G SLA+ + G + WG+ C +TE
Sbjct: 68 DYSQLGHDLPTKRPQLIPELQDYVIIQISCGSRHSLALSDWGQVLSWGDNDCGQLGHATE 127
Query: 108 GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL 167
+ P V TVV++ACG+ H +AL S GE YSWG+N GQL
Sbjct: 128 KEIVQL----PKVVRQLVSKTVVQIACGNNHSLALTSCGE--------LYSWGSNIYGQL 175
Query: 168 GLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN 227
G+ + + CG H+ L++ FG G N
Sbjct: 176 GVNSPNDLTHCNYPLRLTTLLGIPLAAIACGGNHSFLISKSGA----------VFGWGRN 225
Query: 228 --GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGL 281
GQLG + P Q+K L + + + V CG + +++ G V++ G + G
Sbjct: 226 NCGQLGLNDETNRAYPTQLKTL-RTLGVRFVACGDEFSVFLTNEGGVFTCGAGAYGQLGH 284
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G N L R S I QVACG HT+ + K++++G
Sbjct: 285 GFSSNEMLPRMVMELMGSTI---------------TQVACGNRHTLALVPSRGKVYAFGL 329
Query: 342 GRSGVLGTGKTIDFFAPAIVLWP 364
G SG LGT T P +V+ P
Sbjct: 330 GSSGQLGTRSTKSLMLPQVVIGP 352
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 37/211 (17%)
Query: 151 GEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPW----AVYEVTCGSFHTAL 204
G++L C WG+ ++GQLGLG + E L P+ I PW AV +V CG HT
Sbjct: 4 GKELYC--WGSTSHGQLGLGGIEDEQILTPRQI-------PWTPDTAVQQVACGHRHTLF 54
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
LT + + G + QLGH P+ + EL YV ++ + CG H+
Sbjct: 55 LTATGK--------VYACGSNDYSQLGHDLPTKR--PQLIPELQDYV-IIQISCGSRHSL 103
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA 324
+S G V SWG + G +A+ + L+S + VQ+ACG
Sbjct: 104 ALSDWGQVLSWG-DNDCGQLGHATEKEIVQLPKVVRQLVS---------KTVVQIACGNN 153
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
H++ +T G +L+SWG G LG D
Sbjct: 154 HSLALTSCG-ELYSWGSNIYGQLGVNSPNDL 183
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 110/223 (49%), Gaps = 36/223 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +VACG H + L + G+ Y+ G+N+ QLG D ++ RP++I QD
Sbjct: 42 VQQVACGHRHTLFLTATGKV--------YACGSNDYSQLG-HDLPTK-RPQLIPEL-QD- 89
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKEL 247
+ + +++CGS H+ L+ D + + W G + GQLGH T + + +P+ V++L
Sbjct: 90 -YVIIQISCGSRHSLALS------DWGQVLSW--GDNDCGQLGHATEKEIVQLPKVVRQL 140
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISG 305
+V + CG H+ ++S G+++SWG + LG+ LT ++ +L
Sbjct: 141 VSKT-VVQIACGNNHSLALTSCGELYSWGSNIYGQLGVNSPNDLTHCNYPLRLTTLL--- 196
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
G +ACG H+ L++ G ++ WGR G LG
Sbjct: 197 ----GIPL---AAIACGGNHSFLISKSG-AVFGWGRNNCGQLG 231
>gi|384245912|gb|EIE19404.1| RCC1/BLIP-II [Coccomyxa subellipsoidea C-169]
Length = 598
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 37/241 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RE 173
+ P V + V VACG H++A+V G +WG+N GQLG G+
Sbjct: 110 ALEPIRVSALEMNNVHGVACGQGHMLAVVDNGH--------LAAWGSNEYGQLGTGEVGA 161
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
S +P++++ V G+ H+ LT ++FG G G LGHG
Sbjct: 162 SAAQPRVLKRIRGAH---FARVAAGATHSLALTS--------SGQVYSFGEGSFGALGHG 210
Query: 234 TTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
+ P V+ L P+ + VS+ G + ++ VS +G V++WG K L
Sbjct: 211 DVNNRAKPTLVQALWPEAI--VSIAAGEYFSAAVSLSGRVFTWGRNK------YGQLGNG 262
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
E G+A P + P + VQVACG H + +T G ++++WG SG LG G
Sbjct: 263 EFGNAFLPQPV-------PGIEQAVQVACGDHHCIALTRWG-EVYTWGLHSSGQLGQGSN 314
Query: 353 I 353
+
Sbjct: 315 L 315
Score = 79.0 bits (193), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 88/333 (26%), Positives = 142/333 (42%), Gaps = 53/333 (15%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAG--- 80
Y S DG+L +GSN Q G +LE PI++ +++
Sbjct: 80 YNSAFVTRDGELYTTGSND-----ARQLGVKGREVALE---------PIRVSALEMNNVH 125
Query: 81 ------GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
G M +DN G L WG+ T G S+ P + G +VA
Sbjct: 126 GVACGQGHMLAVVDN-GHLAAWGSNEYGQLGT--GEVGASAAQPRVLKRIRGAHFARVAA 182
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G+ H +AL S+G+ YS+G + G LG GD +R +P +++ P A+
Sbjct: 183 GATHSLALTSSGQ--------VYSFGEGSFGALGHGDVNNRAKPTLVQAL---WPEAIVS 231
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
+ G + +A ++ L +T+G + GQLG+G +A +P+ V + Q V
Sbjct: 232 IAAGEYFSAAVS--------LSGRVFTWGRNKYGQLGNGEFGNAFLPQPVPGIEQA---V 280
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
V CG H ++ G+V++WG+ L ++L +A++ L S + Q
Sbjct: 281 QVACGDHHCIALTRWGEVYTWGLHSSGQLGQGSNL----GSEALNGCLCSPSRVDSLADQ 336
Query: 315 DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
QV+ GA H+ V+ G +LW G G L
Sbjct: 337 SIRQVSAGARHSFFVS-PGEQLWGAGANDEGQL 368
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 112/270 (41%), Gaps = 34/270 (12%)
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
+L+ WG D G +S P PV G VV A GS + + GE
Sbjct: 38 SLYTWGRS---DLGQTGSGRDQNSTAPEPVQALQGKDVVHAAGGSYNSAFVTRDGE---- 90
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
Y+ G+N+ QLG+ RE L P + ++ V+ V CG H +
Sbjct: 91 ----LYTTGSNDARQLGVKGREVALEPIRVSALEMNN---VHGVACGQGHMLAVV----- 138
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
D W G E GQLG G ++ +V + + + V G H+ ++S+G
Sbjct: 139 -DNGHLAAW--GSNEYGQLGTGEVGASAAQPRVLKRIRGAHFARVAAGATHSLALTSSGQ 195
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+S+G E G +L + + P L+ P + V +A G + V+
Sbjct: 196 VYSFG-EGSFG-----ALGHGDVNNRAKPTLVQALWP-----EAIVSIAAGEYFSAAVSL 244
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++++WGR + G LG G+ + F P V
Sbjct: 245 SG-RVFTWGRNKYGQLGNGEFGNAFLPQPV 273
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 65/138 (47%), Gaps = 19/138 (13%)
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
S +T+G + GQ G G Q++ PE V+ L Q +V G ++++ V+ G++++ G
Sbjct: 37 SSLYTWGRSDLGQTGSGRDQNSTAPEPVQAL-QGKDVVHAAGGSYNSAFVTRDGELYTTG 95
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISG---NGPHGPKFQDPVQVACGAAHTVLVTDDG 333
L A+ PI +S N HG VACG H + V D+G
Sbjct: 96 SNDARQLGVKGREV------ALEPIRVSALEMNNVHG--------VACGQGHMLAVVDNG 141
Query: 334 YKLWSWGRGRSGVLGTGK 351
+ L +WG G LGTG+
Sbjct: 142 H-LAAWGSNEYGQLGTGE 158
>gi|108756969|ref|YP_633591.1| RCC1 repeat-containing protein [Myxococcus xanthus DK 1622]
gi|108460849|gb|ABF86034.1| RCC1 repeat domain protein [Myxococcus xanthus DK 1622]
Length = 669
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/303 (25%), Positives = 129/303 (42%), Gaps = 54/303 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D++ AP+++ +V G SLA G +W WG + G +
Sbjct: 353 LGDETNATRHAPVQVPGLTDATAVAGGHAHSLASRADGTVWAWGL----NGGALGDGTTS 408
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ + P V G + VA GS +AL + D ++WG N +G+LG G
Sbjct: 409 TQYAPVQVSGLTG--AISVAAGSSFSLALDA--------DGTVWAWGMNGSGELGDGTTT 458
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
RL P + + + + G+ H+ L + W +GL +G+LG G
Sbjct: 459 DRLTPVRVSGLSN-----ITALAAGTGHSLAL--------GADGTVWAWGLNFHGELGDG 505
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTR 291
TT S +P QV P +++V G++H+ + + G VW+WG ++ LG + + T+
Sbjct: 506 TTVSRPLPVQV---PGLTGVIAVAAGMYHSVALRNDGTVWAWGWNLKGELG---DGTTTQ 559
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
E SP+ + P + VA G H++ + D L +WG+ LG G
Sbjct: 560 RE-----SPVQV-------PGVTGAIAVAAGGYHSLALLSD-NTLRAWGKNEDRQLGDGT 606
Query: 352 TID 354
D
Sbjct: 607 NTD 609
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/312 (25%), Positives = 126/312 (40%), Gaps = 49/312 (15%)
Query: 59 SLEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL 112
+L D + + AP+++ SV AG SLA+D G +W WG + S G +
Sbjct: 401 ALGDGTTSTQYAPVQVSGLTGAISVAAGSSFSLALDADGTVWAWG---MNGSGELGDGTT 457
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
TP V + +A G+ H +AL G D ++WG N +G+LG G
Sbjct: 458 TDRLTPVRVSGL--SNITALAAGTGHSLAL--------GADGTVWAWGLNFHGELGDGTT 507
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
SR P + V V G +H+ L + + W +G G+LG
Sbjct: 508 VSRPLPVQVPGLT-----GVIAVAAGMYHSVALRN--------DGTVWAWGWNLKGELGD 554
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
GTT P QV P ++V G +H+ + S + +WG + L + R+
Sbjct: 555 GTTTQRESPVQV---PGVTGAIAVAAGGYHSLALLSDNTLRAWGKNEDRQLGDGTNTDRH 611
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
A + +SG V G H++++ +D +W++G SG LG G T
Sbjct: 612 TA------VQVSG-------LTGVTSVFAGGGHSLILRND-QAVWAFGSDVSGQLGDGNT 657
Query: 353 IDFFAPAIVLWP 364
P V P
Sbjct: 658 PSGHGPVQVSLP 669
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/290 (25%), Positives = 109/290 (37%), Gaps = 54/290 (18%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V G SLAI G LW WG+ E ++ +PV VA G
Sbjct: 326 VSGGVSHSLAIRGNGTLWSWGHNSFGQLGDE-----TNATRHAPVQVPGLTDATAVAGGH 380
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H +A + D ++WG N G LG G ++ P + A+
Sbjct: 381 AHSLASRA--------DGTVWAWGLNG-GALGDGTTSTQYAPVQVSGLTG----AISVAA 427
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
SF AL + W +G+ +G+LG GTT L P +V L L +
Sbjct: 428 GSSFSLAL---------DADGTVWAWGMNGSGELGDGTTTDRLTPVRVSGLSNITALAA- 477
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS-----PILISGNGPHGP 311
G H+ + + G VW+WG+ E GD + P+ + P
Sbjct: 478 --GTGHSLALGADGTVWAWGLNF-----------HGELGDGTTVSRPLPVQV-------P 517
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ VA G H+V + +DG +W+WG G LG G T +P V
Sbjct: 518 GLTGVIAVAAGMYHSVALRNDG-TVWAWGWNLKGELGDGTTTQRESPVQV 566
>gi|219129772|ref|XP_002185055.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217403550|gb|EEC43502.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 727
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/219 (31%), Positives = 105/219 (47%), Gaps = 37/219 (16%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS-----FHTALLTHRKRPN 212
+WG GQLG G R P+ + + +V+ G H+ LLT R
Sbjct: 237 AWGVGRRGQLGHGKRRDERLPRRLRG-GIGYAVRIVQVSAGGGLVRVAHSLLLTSTGR-- 293
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV------YLVSVDCGLFHTSVV 266
+FG G+ G LGHG + + +P+ ++ PQYV + V G H++VV
Sbjct: 294 ------VLSFGTGQYGALGHGYSAAKQLPDVMR--PQYVEGLAHVRVCCVAAGELHSAVV 345
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV--QVACGAA 324
+S GDV++WG G C L + ++P ++ G +D V ++CG+
Sbjct: 346 TSDGDVYTWGD----GFC--GQLGHADKRPQLAPRQVTAGG-----LEDEVVASISCGSR 394
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKT-IDFFAPAIVL 362
HT+ VT+DG +++SWG G GVLG T D+ A A V+
Sbjct: 395 HTLAVTEDG-EVFSWGLGHFGVLGRSFTPFDYDADAAVV 432
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 70/159 (44%), Gaps = 31/159 (19%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-----LRPKI 180
G +V+VA H + L S G S+G G LG G ++ +RP+
Sbjct: 276 GGGLVRVA----HSLLLTSTGRVL--------SFGTGQYGALGHGYSAAKQLPDVMRPQY 323
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
+E V V G H+A++T + +T+G G GQLGH + L
Sbjct: 324 VEGLAH---VRVCCVAAGELHSAVVTS--------DGDVYTWGDGFCGQLGHADKRPQLA 372
Query: 241 PEQVKE--LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
P QV L V + S+ CG HT V+ G+V+SWG+
Sbjct: 373 PRQVTAGGLEDEV-VASISCGSRHTLAVTEDGEVFSWGL 410
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 116/297 (39%), Gaps = 68/297 (22%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF---SLVSSFTPSPVWDFHGH 127
+ S+ G +LA+ G ++ WG L S T + + V +FT G
Sbjct: 386 VASISCGSRHTLAVTEDGEVFSWGLGHFGVLGRSFTPFDYDADAAVVNFTVEETLPVDGA 445
Query: 128 TVVKVACGSEHVVALVSA-------------GETYKGEDLVCYSWGANNNGQLGLGDRES 174
+ VA ++V V + G + E + AN L L D
Sbjct: 446 VPIPVARIPDNVAPAVDSFPPRDAAAPALLEGRNFAAELMAHLDLIAN----LSLDDSSD 501
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
+ PK+IE+ Q P + + G H+ LL+ E ++ G G G LGHG
Sbjct: 502 QCIPKVIESL-QGIP--MVGASAGHRHSLLLSQ--------EGALYSCGAGSGGCLGHGD 550
Query: 235 TQSALVPEQV-------KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
TQS + P ++ ++ + ++ + G+ + VS+ G V+ WG GLG+
Sbjct: 551 TQSQMHPVRITAFDEPEEDGSERTRILQMSAGVDISMAVSTRGSVYGWGKTDGGRIGLGM 610
Query: 284 CPN-------ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
N S+ R E G SP+L V V CG H+++V DG
Sbjct: 611 ARNQVTLPRRVSVYREEDG---SPVLA-------------VDVECGYVHSIVVGLDG 651
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/177 (27%), Positives = 77/177 (43%), Gaps = 33/177 (18%)
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCG-----LFHTSVVSSAG 270
S +G+G GQLGHG + +P +++ Y V +V V G + H+ +++S G
Sbjct: 233 SGVAAWGVGRRGQLGHGKRRDERLPRRLRGGIGYAVRIVQVSAGGGLVRVAHSLLLTSTG 292
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAA---HTV 327
V S+G + G + + D + P + G V+V C AA H+
Sbjct: 293 RVLSFGTGQ-YGALGHGYSAAKQLPDVMRPQYVEGLA--------HVRVCCVAAGELHSA 343
Query: 328 LVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEI 384
+VT DG +++WG G G LG AP ++ GGL+DE+
Sbjct: 344 VVTSDG-DVYTWGDGFCGQLGHADKRPQLAP--------------RQVTAGGLEDEV 385
>gi|198421625|ref|XP_002120080.1| PREDICTED: similar to mCG130390, partial [Ciona intestinalis]
Length = 1609
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 152/379 (40%), Gaps = 99/379 (26%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQL GS LVP + + F H+A +C G + I+N G
Sbjct: 761 GQLAEVGSGVLVPQLTKSF----------------HEARKVVC----GQNCTFIINNNGV 800
Query: 93 LWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC--GSE-HVVALVS 144
+ +G +S + +S+ G V ++A GS+ H +AL
Sbjct: 801 VLSCGEGSYGRLGQGNSDDSNRLTHISAL--------QGFIVKQLATSTGSDGHAIALTE 852
Query: 145 AGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
GE + SWG + G+LG G+ + + RP+ IE V +V CG H+A+
Sbjct: 853 NGEVF--------SWGDGDYGKLGHGNSDRQRRPRQIEALRGQE---VVQVACGFKHSAV 901
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
+T ++ +TFG G+ G+LGHG+T + +PE+V L Y+ + V CGL HT
Sbjct: 902 VT--------IDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYI-IGQVACGLNHTV 952
Query: 265 VVSSAG-DVWSWGMEK--GLGLCPNASLTRNEAGDAISPILIS----------------- 304
+VS VW+ G LG+ ++ T + +S + I
Sbjct: 953 IVSQDNLTVWACGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGK 1012
Query: 305 ----------GN--GPHGPKFQDPV----------QVACGAAHTVLVTDDGYKLWSWGRG 342
GN P F V ++ GA HT+ +T G +++WG
Sbjct: 1013 LFMFGQDRMCGNCETRTSPSFNPQVVTALSSHHIIDISVGAEHTIALTSKGI-VYTWGSN 1071
Query: 343 RSGVLGTGKTIDFFAPAIV 361
G LG G T P +V
Sbjct: 1072 TDGQLGLGHTNHVQEPTLV 1090
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 70/158 (44%), Gaps = 26/158 (16%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG------NCPLPDSS 105
L IG + +K + + I + G + A+ G L+M+G NC S
Sbjct: 972 LGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTWDGKLFMFGQDRMCGNCETRTSP 1031
Query: 106 TEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNG 165
SF P V H ++ ++ G+EH +AL S G + Y+WG+N +G
Sbjct: 1032 ---------SFNPQVVTALSSHHIIDISVGAEHTIALTSKG--------IVYTWGSNTDG 1074
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
QLGLG P ++E+ + + + +++ G H+A
Sbjct: 1075 QLGLGHTNHVQEPTLVESLSGKN---IRQISAGRTHSA 1109
Score = 38.9 bits (89), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 90/225 (40%), Gaps = 33/225 (14%)
Query: 34 QLGFSGSNSLVPCVIEQFLTIGAPD--SLEDDSKTNHKAPIKICSVK-------AGGMMS 84
Q+ +S V + + T G D L S TN K P ++ +++ A G+
Sbjct: 891 QVACGFKHSAVVTIDGKLFTFGYGDYGRLGHGSTTNKKIPERVMALENYIIGQVACGLNH 950
Query: 85 LAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
I + L +W C D G + +P+ + + K++CG++ AL
Sbjct: 951 TVIVSQDNLTVWA-CGDGDYGKLGIGGTSAKTSPTKIEVLSRVGIKKISCGAQFTAALTW 1009
Query: 145 AGETYK-GEDLVCYSWGANNNGQLGLGDRESRLRPKI-IETFNQDSPWAVYEVTCGSFHT 202
G+ + G+D +C G+ E+R P + S + +++ G+ HT
Sbjct: 1010 DGKLFMFGQDRMC-------------GNCETRTSPSFNPQVVTALSSHHIIDISVGAEHT 1056
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
LT + + +T+G +GQLG G T P V+ L
Sbjct: 1057 IALTSK--------GIVYTWGSNTDGQLGLGHTNHVQEPTLVESL 1093
>gi|348583549|ref|XP_003477535.1| PREDICTED: RCC1 and BTB domain-containing protein 1-like [Cavia
porcellus]
Length = 531
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--IQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V +G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHVKRVVGIACGQTSSMAVLDSGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPMRVA--ALHRVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + P ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLNPEHIM 280
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 102/227 (44%), Gaps = 44/227 (19%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
API++C+ V G S+A+ G ++ WG NC G S + TP
Sbjct: 117 APIQVCTNLLIKQVVEVACGSHHSMALAADGEVFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHVKRVVGIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + ++ V ++ CG HT LT E + + +G GQLG G +
Sbjct: 224 PMRVAALHR---VCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGNKNN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA----GDVWSWGMEKG 280
L PE + + V V+ H++ +S+A G V+ WG +G
Sbjct: 273 LLNPEHIMVEKERV----VEIAACHSTHISAAKTQGGHVYMWGQCRG 315
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+PI + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPIQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>gi|408501217|ref|YP_006865136.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
gi|408466041|gb|AFU71570.1| RCC1-like protein [Bifidobacterium asteroides PRL2011]
Length = 1078
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 139/348 (39%), Gaps = 75/348 (21%)
Query: 33 GQLGF-SGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
GQLG + SNS +P + GA +S E +K V AG S+A+ G
Sbjct: 649 GQLGNNTKSNSSIPVRV-----YGASNSGEG---------LKAVQVCAGMWNSMALGIDG 694
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK- 150
++ WG S G+ S TP + T VK + V V ++
Sbjct: 695 TVFTWG-------SQARGYDTTSGTTPQTI-----PTTVKDSSDPSGVFHAVQISTSWSF 742
Query: 151 ----GEDLVCYSWGANNNGQLGLGDRESRLRPKIIET--------FNQDSP--WAVYEVT 196
G+D Y WG N NGQ G + + T + QD+ W +V+
Sbjct: 743 NLAIGQDGYVYVWGYNTNGQFGNNTSDGIHTTTVHSTPSRIPNPAYPQDTSRGWRALQVS 802
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT---QSALVPEQVKELPQY--- 250
G +H ++ E+ W +G NGQ+G+G++ + +P+QV+ P
Sbjct: 803 AGGWHALVIDE--------ENKIWAWGFNRNGQIGNGSSSDYNANPLPKQVRINPNDSST 854
Query: 251 -VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI------ 303
+ V G++H+ + + G VW+WG N + D +SP+ +
Sbjct: 855 GLKATQVSAGIYHSMAIDTNGSVWAWGQND------NGQVGDGTTNDRLSPVKVFDSAQS 908
Query: 304 -SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
S GP + VQ+ G H++ + GY +WG SG LG G
Sbjct: 909 TSSAGP----WLKAVQLNAGYKHSLAIDPRGYAR-AWGNNFSGQLGNG 951
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 121/307 (39%), Gaps = 44/307 (14%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDF----HGHTVV 130
+ AG SLAI + G ++ WGN + G + +S P V+ G V
Sbjct: 622 VQISAGASHSLAIGSDGYVYAWGNN---NHGQLGNNTKSNSSIPVRVYGASNSGEGLKAV 678
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V G + +AL G D ++WG+ G D S P+ I T +DS
Sbjct: 679 QVCAGMWNSMAL--------GIDGTVFTWGSQARGY----DTTSGTTPQTIPTTVKDS-- 724
Query: 191 AVYEVTCGSFHTALLTHRKRPNDML--ESMCWTFGLGENGQLGHGTT---QSALVPEQVK 245
G FH ++ N + + + +G NGQ G+ T+ + V
Sbjct: 725 ---SDPSGVFHAVQISTSWSFNLAIGQDGYVYVWGYNTNGQFGNNTSDGIHTTTVHSTPS 781
Query: 246 ELPQYVY---------LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
+P Y + V G +H V+ +W+WG + G N S + A
Sbjct: 782 RIPNPAYPQDTSRGWRALQVSAGGWHALVIDEENKIWAWGFNRN-GQIGNGSSSDYNANP 840
Query: 297 AISPILISGN-GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ I+ N G K QV+ G H++ + +G +W+WG+ +G +G G T D
Sbjct: 841 LPKQVRINPNDSSTGLKA---TQVSAGIYHSMAIDTNG-SVWAWGQNDNGQVGDGTTNDR 896
Query: 356 FAPAIVL 362
+P V
Sbjct: 897 LSPVKVF 903
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 114/296 (38%), Gaps = 52/296 (17%)
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTP----SPVWDFHGHTVVKVACGSEH 138
SLA+ + G + WGN S G + P P T V+++ G+ H
Sbjct: 574 FSLAVGSDGNAYAWGNNMY---SQLGNGTTTDQAMPVQVKKPAGAPANFTYVQISAGASH 630
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPWAVYEVTC 197
+A+ G D Y+WG NN+GQLG + + P ++ N +V
Sbjct: 631 SLAI--------GSDGYVYAWGNNNHGQLGNNTKSNSSIPVRVYGASNSGEGLKAVQVCA 682
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
G +++ L ++ +T+G G T +P VK+ S
Sbjct: 683 GMWNSMAL--------GIDGTVFTWGSQARGYDTTSGTTPQTIPTTVKD-------SSDP 727
Query: 258 CGLFHTSVVSSAGDVWSWGMEKGL-------GLCPNASLTRNEAGDAISPILISGNGPHG 310
G+FH +S++ WS+ + G G N N + D I +
Sbjct: 728 SGVFHAVQISTS---WSFNLAIGQDGYVYVWGYNTNGQFGNNTS-DGIHTTTVHSTPSRI 783
Query: 311 PKFQDP---------VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
P P +QV+ G H LV D+ K+W+WG R+G +G G + D+ A
Sbjct: 784 PNPAYPQDTSRGWRALQVSAGGWH-ALVIDEENKIWAWGFNRNGQIGNGSSSDYNA 838
Score = 41.6 bits (96), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 66/170 (38%), Gaps = 26/170 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGH- 127
+K V AG S+AID G++W WG N + D +T S V F + G
Sbjct: 856 LKATQVSAGIYHSMAIDTNGSVWAWGQNDNGQVGDGTTNDRLSPVKVFDSAQSTSSAGPW 915
Query: 128 -TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES------------ 174
V++ G +H +A+ G +WG N +GQLG G +
Sbjct: 916 LKAVQLNAGYKHSLAIDPRG--------YARAWGNNFSGQLGNGISNNDDSANPIPVPVM 967
Query: 175 -RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
L+P I + SP S +LT +P + S+ +T G
Sbjct: 968 FNLQPVITGAIFEASPGTNLTPVSNSDSVTVLTPPHQPGPVTVSVDYTLG 1017
>gi|310824879|ref|YP_003957237.1| regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
gi|309397951|gb|ADO75410.1| Regulator of chromosome condensation [Stigmatella aurantiaca
DW4/3-1]
Length = 775
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 125/305 (40%), Gaps = 46/305 (15%)
Query: 60 LEDDSKTNHKAPI------KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + P+ + +V AG SLA+ G +W WG+ + G +
Sbjct: 454 LGDGTTRRREVPVPVPKLSSVVAVAAGRYHSLAVRFDGTVWAWGDN---EYGQVGDGTET 510
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P V + G V VA G H + L S D ++WG N+ GQLG G
Sbjct: 511 SRKAPVRVPNLGGG--VAVAAGENHSLVLRS--------DGTVWAWGGNHYGQLGNGITS 560
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ + V G +++ L R + W +GL GQLG G
Sbjct: 561 DSPVPVQVQGLSGG-----VAVAAGQYYS--LAVRS------DGTVWAWGLNFEGQLGDG 607
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
T + VP +V ++P V+V G H VV S G VW+WG + A R
Sbjct: 608 TASDSPVPVRV-QVPGLSGGVAVAAGTSHALVVRSDGTVWAWGSNYDGQVGEGAPRRR-- 664
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
+ P+ + G + + VA G H++ V DG +W+WG +GVLG G T
Sbjct: 665 ---VLMPVQVQG-------LSEGMAVAAGYNHSLAVRSDG-SVWAWGGNTAGVLGDGTTD 713
Query: 354 DFFAP 358
P
Sbjct: 714 RRTVP 718
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 122/288 (42%), Gaps = 42/288 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ +V AG +SLA+ G +W WG +S G + + + PV V V
Sbjct: 323 VEAVAAGHSLSLAVRFDGTVWAWGG----NSYGALGNDTIETMSTVPVQVPGLSGGVTVV 378
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
S H +A+ S D ++WG N+ GQLG G RL ++ + V
Sbjct: 379 AASSHALAVRS--------DGTVWAWGGNHYGQLGDGTTSERLVAVPVQGLS-----GVM 425
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
V H+ L R ++ W +G GQLG GTT+ VP V P+ +
Sbjct: 426 AVAARQEHS--LAVRS------DATVWAWGRNYEGQLGDGTTRRREVPVPV---PKLSSV 474
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V+V G +H+ V G VW+WG + G + + T +A P+ + P
Sbjct: 475 VAVAAGRYHSLAVRFDGTVWAWGDNE-YGQVGDGTETSRKA-----PVRV-------PNL 521
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V VA G H++++ DG +W+WG G LG G T D P V
Sbjct: 522 GGGVAVAAGENHSLVLRSDG-TVWAWGGNHYGQLGNGITSDSPVPVQV 568
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 123/316 (38%), Gaps = 55/316 (17%)
Query: 61 EDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFS 111
D +T P+++ +V A +LA+ + G +W WG L D +T
Sbjct: 355 NDTIETMSTVPVQVPGLSGGVTVVAASSHALAVRSDGTVWAWGGNHYGQLGDGTTS---- 410
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
PV G V+ VA EH +A+ S D ++WG N GQLG G
Sbjct: 411 --ERLVAVPVQGLSG--VMAVAARQEHSLAVRS--------DATVWAWGRNYEGQLGDGT 458
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R P + + +V V G +H+ + + W +G E GQ+G
Sbjct: 459 TRRREVPVPVPKLS-----SVVAVAAGRYHSLAV--------RFDGTVWAWGDNEYGQVG 505
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
GT S P +V P V+V G H+ V+ S G VW+WG L
Sbjct: 506 DGTETSRKAPVRV---PNLGGGVAVAAGENHSLVLRSDGTVWAWGGNH------YGQLGN 556
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGK 351
D+ P+ + G V VA G +++ V DG +W+WG G LG G
Sbjct: 557 GITSDSPVPVQVQG-------LSGGVAVAAGQYYSLAVRSDG-TVWAWGLNFEGQLGDGT 608
Query: 352 TIDFFAPAIVLWPPLT 367
D P V P L+
Sbjct: 609 ASDSPVPVRVQVPGLS 624
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 113/280 (40%), Gaps = 47/280 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
+ +V A SLA+ + +W WG L D +T P PV +VV
Sbjct: 424 VMAVAARQEHSLAVRSDATVWAWGRNYEGQLGDGTTR------RREVPVPVPKLS--SVV 475
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
VA G H +A+ D ++WG N GQ+G G SR P +
Sbjct: 476 AVAAGRYHSLAVR--------FDGTVWAWGDNEYGQVGDGTETSRKAPVRVPNLGGG--- 524
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V G H+ +L + W +G GQLG+G T + VP QV+ L
Sbjct: 525 --VAVAAGENHSLVLRS--------DGTVWAWGGNHYGQLGNGITSDSPVPVQVQGLSGG 574
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V+V G +++ V S G VW+WG+ L A D+ P+ +
Sbjct: 575 ---VAVAAGQYYSLAVRSDGTVWAWGLNF------EGQLGDGTASDSPVPVRV-----QV 620
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
P V VA G +H ++V DG +W+WG G +G G
Sbjct: 621 PGLSGGVAVAAGTSHALVVRSDG-TVWAWGSNYDGQVGEG 659
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/282 (28%), Positives = 116/282 (41%), Gaps = 49/282 (17%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+V AGG+ SLA+ + G +W WG+ L D +T S P V G VV
Sbjct: 173 VAVAAGGLHSLALRSDGTVWAWGSNFEGQLGDGTTN------VSLVPVRVKKLTG--VVA 224
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G +H +A+ S D ++WG N G LG G SR P ++ +
Sbjct: 225 VAAGEKHSLAVRS--------DGTVWTWGFNGYGALGDGTTSSRKVPVQVQGLSGG---- 272
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQY 250
V G +H+ L R + W +G GQLG GT + LVP Q + L
Sbjct: 273 -VAVAGGVYHS--LAVRS------DGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLSG- 322
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ +V G + V G VW+WG G N ++ + P+ +
Sbjct: 323 --VEAVAAGHSLSLAVRFDGTVWAWGGNS-YGALGNDTIETM----STVPVQV------- 368
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P V V ++H + V DG +W+WG G LG G T
Sbjct: 369 PGLSGGVTVVAASSHALAVRSDG-TVWAWGGNHYGQLGDGTT 409
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 123/298 (41%), Gaps = 48/298 (16%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
+ D ++T+ KAP+++ +V AG SL + + G +W WG +
Sbjct: 504 VGDGTETSRKAPVRVPNLGGGVAVAAGENHSLVLRSDGTVWAWGGNHYGQLGNG-----I 558
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+S +P PV V VA G + +A+ S D ++WG N GQLG G
Sbjct: 559 TSDSPVPVQVQGLSGGVAVAAGQYYSLAVRS--------DGTVWAWGLNFEGQLGDGTAS 610
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P ++ V G+ H ++ + W +G +GQ+G G
Sbjct: 611 DSPVPVRVQVPGLSGG---VAVAAGTSHALVVRS--------DGTVWAWGSNYDGQVGEG 659
Query: 234 T-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
+ L+P QV+ L + + +V G H+ V S G VW+WG G+ + + R
Sbjct: 660 APRRRVLMPVQVQGLSEGM---AVAAGYNHSLAVRSDGSVWAWGGNT-AGVLGDGTTDRR 715
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + G G + VA G +H++++ DG W+ G SG +G G
Sbjct: 716 T-------VPVQAQGLTGAR-----AVAAGESHSLVLRSDGTG-WAMGSNASGQIGDG 760
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 88/222 (39%), Gaps = 39/222 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV VA G+ H +AL S G + C Q G G P + +
Sbjct: 123 VVAVAVGAYHSLALRSDGTVWAVGRAAC---------QGGDGTASDCTVPAPVPGLSGG- 172
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V G H+ L + W +G GQLG GTT +LVP +VK+L
Sbjct: 173 ----VAVAAGGLHSLALRS--------DGTVWAWGSNFEGQLGDGTTNVSLVPVRVKKL- 219
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+V+V G H+ V S G VW+WG G G + + + + P+ + G
Sbjct: 220 --TGVVAVAAGEKHSLAVRSDGTVWTWGF-NGYGALGDGTTSSRKV-----PVQVQG--- 268
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
V VA G H++ V DG +W WG G LG G
Sbjct: 269 ----LSGGVAVAGGVYHSLAVRSDG-TVWGWGANGVGQLGDG 305
Score = 58.5 bits (140), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 89/327 (27%), Positives = 124/327 (37%), Gaps = 72/327 (22%)
Query: 32 DGQLGFSGSN-SLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
+GQLG +N SLVP +++ + +V AG SLA+ +
Sbjct: 199 EGQLGDGTTNVSLVPVRVKKL--------------------TGVVAVAAGEKHSLAVRSD 238
Query: 91 GALWMW---GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
G +W W G L D +T S P V G V VA G H +A+ S
Sbjct: 239 GTVWTWGFNGYGALGDGTTS------SRKVPVQVQGLSGG--VAVAGGVYHSLAVRS--- 287
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLT 206
D + WGAN GQLG G R L P + + V V G H+ L
Sbjct: 288 -----DGTVWGWGANGVGQLGDGTPMRRVLVPVQAQGLS-----GVEAVAAG--HSLSLA 335
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKELPQYVYLVSVDCGLFHTSV 265
R + W +G G LG+ T ++ + VP QV L V +V+ H
Sbjct: 336 VR------FDGTVWAWGGNSYGALGNDTIETMSTVPVQVPGLSGGVTVVAASS---HALA 386
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
V S G VW+WG L + + + + G + VA H
Sbjct: 387 VRSDGTVWAWGGNH------YGQLGDGTTSERLVAVPVQG-------LSGVMAVAARQEH 433
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKT 352
++ V D +W+WGR G LG G T
Sbjct: 434 SLAVRSD-ATVWAWGRNYEGQLGDGTT 459
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 62/142 (43%), Gaps = 20/142 (14%)
Query: 222 FGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+ +GEN GQLG GTT VP QV+ L +V+V G +H+ + S G VW+
Sbjct: 93 WAVGENVFGQLGDGTTSERRVPVQVQGLSG---VVAVAVGAYHSLALRSDGTVWA----V 145
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
G C T A D P + P V VA G H++ + DG +W+W
Sbjct: 146 GRAACQGGDGT---ASDCTVPAPV-------PGLSGGVAVAAGGLHSLALRSDG-TVWAW 194
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G LG G T P V
Sbjct: 195 GSNFEGQLGDGTTNVSLVPVRV 216
>gi|428177897|gb|EKX46775.1| hypothetical protein GUITHDRAFT_40435, partial [Guillardia theta
CCMP2712]
Length = 312
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 112/268 (41%), Gaps = 34/268 (12%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G+++ WG L S G + S P V V VA G H A++ G+ +
Sbjct: 79 GSVYSWG---LGSSGRLGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLF- 134
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+WG GQLG G ES P +E W V G +H+ +T
Sbjct: 135 -------AWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWRA--VRGGEYHSLGMTD--- 182
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ S+ W++GL +GQLGHG + P+ + EL + CG +S+
Sbjct: 183 ----VGSL-WSWGLNNDGQLGHGDEERCGRPKGISELVG-TKISCFSCGPNFNVAISNGS 236
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
V+SWG + L + + I L SG+ HGP + V+CG H VL
Sbjct: 237 QVFSWGNNR------YGQLGHGDKVEQIEETLRSGS--HGPLV---LSVSCGGRH-VLGL 284
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
D ++W+WG SG LG G I AP
Sbjct: 285 DRKGRIWAWGCNESGCLGIGDNIPRLAP 312
Score = 68.2 bits (165), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 102/229 (44%), Gaps = 37/229 (16%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIET 183
GH VV+VA G +H + L AG L C G N+ QLG G RE+ P+ + T
Sbjct: 5 GHHVVQVAAGGDHTLFLTDAGRV-----LAC---GRNDCYQLGDGYEGREAGPEPQQVST 56
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
V E+ CG H + L+ +++GLG +G+LG G +S P +
Sbjct: 57 LRWKR---VVEMACGDAHNLV--------RCLDGSVYSWGLGSSGRLGLGNFKSVPQPCK 105
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI 303
V L + VSV G +H+ V G +++WG G C + E+ P+ +
Sbjct: 106 VSGLGEE-RCVSVAAGYYHSFAVMEGGKLFAWGN----GTCGQLGTGKFES--CCEPVQV 158
Query: 304 S--GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
GNG Q V G H++ +TD G LWSWG G LG G
Sbjct: 159 EEPGNG------QRWRAVRGGEYHSLGMTDVG-SLWSWGLNNDGQLGHG 200
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 94/230 (40%), Gaps = 26/230 (11%)
Query: 52 LTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS 111
L +G S+ K + + SV AG S A+ G L+ WGN T G F
Sbjct: 92 LGLGNFKSVPQPCKVSGLGEERCVSVAAGYYHSFAVMEGGKLFAWGNGTCGQLGT-GKFE 150
Query: 112 LVSSFTPSPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S P V + +G V G H + + G + SWG NN+GQLG G
Sbjct: 151 --SCCEPVQVEEPGNGQRWRAVRGGEYHSLGMTDVGSLW--------SWGLNNDGQLGHG 200
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCG-SFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
D E RPK I + +CG +F+ A+ S +++G GQ
Sbjct: 201 DEERCGRPKGISELVGTK---ISCFSCGPNFNVAISN---------GSQVFSWGNNRYGQ 248
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
LGHG + + E ++ ++SV CG H + G +W+WG +
Sbjct: 249 LGHG-DKVEQIEETLRSGSHGPLVLSVSCGGRHVLGLDRKGRIWAWGCNE 297
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/180 (28%), Positives = 75/180 (41%), Gaps = 19/180 (10%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V G HT LT R + C+ G G G+ ++ P+QV L ++
Sbjct: 8 VVQVAAGGDHTLFLTDAGRVLACGRNDCYQLGDGYEGR------EAGPEPQQVSTL-RWK 60
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V + CG H V G V+SWG+ + L P +SG G
Sbjct: 61 RVVEMACGDAHNLVRCLDGSVYSWGLGS------SGRLGLGNFKSVPQPCKVSGLGE--- 111
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFK 371
+ V VA G H+ V + G KL++WG G G LGTGK P V P + ++
Sbjct: 112 --ERCVSVAAGYYHSFAVMEGG-KLFAWGNGTCGQLGTGKFESCCEPVQVEEPGNGQRWR 168
>gi|326918486|ref|XP_003205519.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like
[Meleagris gallopavo]
Length = 1050
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTV 129
I V G S+A+ + G ++ WG + ++G L + P + + T+
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWG------AGSDGQLGLTTIEDAVTVPRLIKKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++++CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ +
Sbjct: 140 LQISCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G +GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGKNSSGQLGLSDERDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RSQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 118/253 (46%), Gaps = 48/253 (18%)
Query: 118 PSP-VWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P V+ F H V +VACG H V L+ GE Y + G N GQLG S+
Sbjct: 23 PEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLGHESEGSK 74
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P++I + + V CG H+ L+ + + +++G G +GQLG T
Sbjct: 75 --PELIGAL---AGQHIVHVACGESHSVALSDQGQ--------VFSWGAGSDGQLGLTTI 121
Query: 236 QSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGL-CPN-AS 288
+ A+ VP +K+L Q ++ + CG +H +++ G ++WG + GLG CP+ AS
Sbjct: 122 EDAVTVPRLIKKLNQQT-ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R ++ D I P+ QVA G AH+ ++ G ++ WG+ SG LG
Sbjct: 181 PQRVKSLDGI-PL---------------AQVAAGGAHSFALSLSG-AVFGWGKNSSGQLG 223
Query: 349 TGKTIDFFAPAIV 361
D +P V
Sbjct: 224 LSDERDRESPCHV 236
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG +SS + G S +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWGK----NSSGQLGLSDERDRESPCHVKLLRSQKVV 245
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSP 189
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 246 YISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE-- 295
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ M + FG G GQLG G T + P VK
Sbjct: 296 --VSQIACGRHHTLAFV----PSS---GMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>gi|156365518|ref|XP_001626692.1| predicted protein [Nematostella vectensis]
gi|156213578|gb|EDO34592.1| predicted protein [Nematostella vectensis]
Length = 1056
Score = 80.9 bits (198), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 147/343 (42%), Gaps = 54/343 (15%)
Query: 30 CMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
C DG + GSN +F +G S + + I V G ++A+ +
Sbjct: 51 CKDGTVYTCGSN--------EFGQLGQEKSHTNPESVHAIETFTITKVTCGKAHTVAVSD 102
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
G ++ WG+ P + +VV++ACG H +AL +G
Sbjct: 103 QGLVFAWGDNSYGQIGLGSKVKEKVQTIPKMLKGLAKMSVVQIACGCNHSMALTISGH-- 160
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
L C WG N++GQLG+G S + P + + N P+ + ++ G H+ L+
Sbjct: 161 ----LFC--WGDNSSGQLGIGKTHSSMSEPAPVLSLN-GVPFML--ISAGGAHSFALS-- 209
Query: 209 KRPNDMLESMCWTFGLGEN--GQLG-HGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTS 264
S FG G+N GQLG H TT L P +K L Q V VS CG HT+
Sbjct: 210 --------SSGALFGWGKNEYGQLGVHDTTDRPL-PTLLKSLRSQGVCYVS--CGEKHTA 258
Query: 265 VVSSAGDVWSWGMEKGLGLCPNAS---LTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
V++S G V+++G L N++ T + + + ++ Q+AC
Sbjct: 259 VLTSDGGVFTFGCGTSGQLGHNSNHHEYTPRKVFELMGSVV--------------TQIAC 304
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
G AHT+ + +++++GRG G LG G T + +P P
Sbjct: 305 GRAHTLALVPSSGRVYTFGRGGDGQLGLGVTNNCNSPMTAKGP 347
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 91/198 (45%), Gaps = 24/198 (12%)
Query: 157 YSWGANNNGQLGLGDRESRL--RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
+ WG + GQLG+G+ E P+++E S V EV+CG HTA L
Sbjct: 2 FCWGKCSEGQLGVGETEQEFISTPRLLENLEFSS--NVREVSCGWNHTAFLCK------- 52
Query: 215 LESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ +T G E GQLG + + PE V + + + V CG HT VS G V++
Sbjct: 53 -DGTVYTCGSNEFGQLGQEKSHTN--PESVHAIETFT-ITKVTCGKAHTVAVSDQGLVFA 108
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
WG + G S + + P ++ G VQ+ACG H++ +T G+
Sbjct: 109 WG-DNSYGQIGLGSKVKEKVQTI--PKMLKGLAK-----MSVVQIACGCNHSMALTISGH 160
Query: 335 KLWSWGRGRSGVLGTGKT 352
L+ WG SG LG GKT
Sbjct: 161 -LFCWGDNSSGQLGIGKT 177
>gi|449665602|ref|XP_002165309.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like, partial
[Hydra magnipapillata]
Length = 731
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 87/188 (46%), Gaps = 23/188 (12%)
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G ++ WG+ F S P V D ++++ G H +AL +G
Sbjct: 85 GHVFSWGSNEFGQVGINSKFHKYVS--PQLVRDLSNCPIIQICAGGHHSLALTISG---- 138
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
++WG N+ GQLGLGD++ RL P I++ N V ++CG H+ LLT R
Sbjct: 139 ----TIFAWGKNSFGQLGLGDQQDRLFPTKIQSMNGKH---VRYISCGEEHSVLLTSAGR 191
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT-SVVSSA 269
+TFG G +GQLGH + +P+ V +L + + CG HT + V
Sbjct: 192 --------VYTFGCGSSGQLGHNEFEDQFIPKMVVDLMG-TPVTQIACGRKHTLAHVMKG 242
Query: 270 GDVWSWGM 277
++S+G+
Sbjct: 243 NKLYSFGL 250
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/266 (25%), Positives = 115/266 (43%), Gaps = 46/266 (17%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVAL-----VSAGETYKGE-----------DLVCYSWGA 161
P+P+ + K+ CG H + L ++G Y GE D +SWG+
Sbjct: 33 PTPILVNTSFCIEKIICGWNHTLFLSGGLVYASGLNYDGELGISNENTEVPDGHVFSWGS 92
Query: 162 NNNGQLGLGDRESR-LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCW 220
N GQ+G+ + + + P+++ S + ++ G H+ LT + +
Sbjct: 93 NEFGQVGINSKFHKYVSPQLVRDL---SNCPIIQICAGGHHSLALT--------ISGTIF 141
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+G GQLG G Q L P +++ + ++V +S CG H+ +++SAG V+++G
Sbjct: 142 AWGKNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYIS--CGEEHSVLLTSAGRVYTFG--- 196
Query: 280 GLGLC-PNASLTRNEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLW 337
C + L NE D P ++ PV Q+ACG HT+ G KL+
Sbjct: 197 ----CGSSGQLGHNEFEDQFIPKMVVD------LMGTPVTQIACGRKHTLAHVMKGNKLY 246
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLW 363
S+G G LG G P + W
Sbjct: 247 SFGLNVKGQLGIGSYEKARIPMLTTW 272
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 102/228 (44%), Gaps = 48/228 (21%)
Query: 32 DGQLGFSGSNSLVP---------------CVIEQFLTIGAPDSLEDDSKTNHKAPIKICS 76
DG+LG S N+ VP + +F +P + D S I+IC
Sbjct: 70 DGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSNC---PIIQIC- 125
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL---VSSFTPSPVWDFHGHTVVKVA 133
AGG SLA+ +G ++ WG ++ G L P+ + +G V ++
Sbjct: 126 --AGGHHSLALTISGTIFAWG------KNSFGQLGLGDQQDRLFPTKIQSMNGKHVRYIS 177
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG EH V L SAG Y++G ++GQLG + E + PK++ +P V
Sbjct: 178 CGEEHSVLLTSAGRV--------YTFGCGSSGQLGHNEFEDQFIPKMVVDL-MGTP--VT 226
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
++ CG HT L H + N + ++FGL GQLG G+ + A +P
Sbjct: 227 QIACGRKHT--LAHVMKGNKL-----YSFGLNVKGQLGIGSYEKARIP 267
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 104/229 (45%), Gaps = 37/229 (16%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIE-TFNQ----DSPWAVYEVTCGSFHTALLTH---- 207
YSWG N QLG + + + + I+ TF ++ + + ++ CG HT L+
Sbjct: 4 YSWGCNAYNQLGFKNLQEKDENEPIDNTFPTPILVNTSFCIEKIICGWNHTLFLSGGLVY 63
Query: 208 ------------RKRPNDMLESMCWTFGLGENGQLGHGTTQSALV-PEQVKELPQYVYLV 254
++ + +++G E GQ+G + V P+ V++L ++
Sbjct: 64 ASGLNYDGELGISNENTEVPDGHVFSWGSNEFGQVGINSKFHKYVSPQLVRDLSN-CPII 122
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILI-SGNGPHGPKF 313
+ G H+ ++ +G +++WG + G L + D + P I S NG H
Sbjct: 123 QICAGGHHSLALTISGTIFAWG-KNSFG-----QLGLGDQQDRLFPTKIQSMNGKH---- 172
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
++CG H+VL+T G +++++G G SG LG + D F P +V+
Sbjct: 173 --VRYISCGEEHSVLLTSAG-RVYTFGCGSSGQLGHNEFEDQFIPKMVV 218
>gi|449476139|ref|XP_004154652.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
LOC101226798 [Cucumis sativus]
Length = 1103
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
V G + A+ +G L+ WG+ +S G VS + P V G + ++CG
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTY-NSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCG 423
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GDR+S P+ +E+
Sbjct: 424 PWHTALVTSAGK--------LFTFGDGTFGVLGHGDRDSISIPREVESLKG---LRTVRA 472
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ N+ +T+G G+ G+LGHG ++ LVP V L +
Sbjct: 473 ACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPN 532
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T ++++G +++ G P N D P + G
Sbjct: 533 F-CQVACGHSLTVALTNSGHIYTMG-------SPVYGQLGNPQADGKLPARVEGK--LSK 582
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + ++ACGA H ++T ++++WG+G +G LG G T D P +V
Sbjct: 583 SFVE--ELACGAYHVAVLTSR-TEVYTWGKGANGRLGHGSTDDRNTPTLV 629
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S + S P + V +ACG+ H + GE + SWG G+LG G
Sbjct: 292 SKIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVF--------SWGEEYGGRLGHG 343
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENG 228
PK+I+ S + V CG +HT +T L +T+G G +G
Sbjct: 344 GDSDAHHPKLIDAL---SNLNIELVACGEYHTCAVT--------LSGDLYTWGDGTYNSG 392
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
LGHG S VP++V Q +++ S+ CG +HT++V+SAG ++++G + G+ +
Sbjct: 393 LLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFG-DGTFGVLGHGD 451
Query: 289 LTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKL 336
D+IS P + K V+ ACG HT V + KL
Sbjct: 452 R------DSISIPREV-----ESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKL 500
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G G LG G P V
Sbjct: 501 FTWGDGDKGRLGHGDKEARLVPTCV 525
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 48/271 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
+ I S+ G + + +AG L+ +G +G F ++ S P V
Sbjct: 415 LHISSISCGPWHTALVTSAGKLFTFG---------DGTFGVLGHGDRDSISIPREVESLK 465
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG GD+E+RL P
Sbjct: 466 GLRTVRAACGVWHTAAVV---EVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP 522
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT+ +T G GQLG+
Sbjct: 523 TCVAALVEPN---FCQVACGHSLTVALTN--------SGHIYTMGSPVYGQLGNPQADGK 571
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
L P +V+ ++ + CG +H +V++S +V++WG KG N L D
Sbjct: 572 L-PARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWG--KG----ANGRLGHGSTDDRN 624
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
+P L+ K + +ACG T +
Sbjct: 625 TPTLV-----EALKDKQVKSIACGTNFTAAI 650
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
++ CG H ++V+ G+V+SWG E G L GD+ + H PK
Sbjct: 312 NIACGNRHAALVTKQGEVFSWGEEYGGRL--------GHGGDSDA---------HHPKLI 354
Query: 315 DPVQ------VACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
D + VACG HT VT G L++WG G SG+LG GK + + P V P
Sbjct: 355 DALSNLNIELVACGEYHTCAVTLSG-DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGP 411
>gi|149043904|gb|EDL97355.1| rCG61079, isoform CRA_d [Rattus norvegicus]
Length = 245
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 112/258 (43%), Gaps = 43/258 (16%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CG H V ++ +D
Sbjct: 4 WGNASYGQLGL-GGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVL--------DDGT 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQLG +SR +P+ + + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQLG--HEKSRKKPEQVVALDAQN---IVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W GL +GQLG G+ + VP +K L + +V V CG +H+ +S A +V+
Sbjct: 104 QVYAW--GLDSDGQLGLQGSEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFC 160
Query: 275 WGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
WG K GLG+ E SP LI G F +QVA G AH+ ++T
Sbjct: 161 WGQNKYGQLGLGI---------ECQKQTSPQLI--KSLLGIPF---MQVAAGGAHSFVLT 206
Query: 331 DDGYKLWSWGRGRSGVLG 348
G ++ WGR + G LG
Sbjct: 207 LSG-AIFGWGRNKFGQLG 223
Score = 45.4 bits (106), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 57/156 (36%), Gaps = 26/156 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLS------DIQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G +
Sbjct: 157 EVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSGAIF-- 212
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
WG N GQLGL D R ++ N+D
Sbjct: 213 ------GWGRNKFGQLGLNDENGRFSLELSAFLNED 242
>gi|449442577|ref|XP_004139058.1| PREDICTED: uncharacterized protein LOC101219074 [Cucumis sativus]
Length = 1103
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 30/290 (10%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACG 135
V G + A+ +G L+ WG+ +S G VS + P V G + ++CG
Sbjct: 365 VACGEYHTCAVTLSGDLYTWGDGTY-NSGLLGHGKDVSHWVPKRVTGPLQGLHISSISCG 423
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G G LG GDR+S P+ +E+
Sbjct: 424 PWHTALVTSAGK--------LFTFGDGTFGVLGHGDRDSISIPREVESLKG---LRTVRA 472
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ N+ +T+G G+ G+LGHG ++ LVP V L +
Sbjct: 473 ACGVWHTAAVVEVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVPTCVAALVEPN 532
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG T ++++G +++ G P N D P + G
Sbjct: 533 F-CQVACGHSLTVALTNSGHIYTMG-------SPVYGQLGNPQADGKLPARVEGK--LSK 582
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + ++ACGA H ++T ++++WG+G +G LG G T D P +V
Sbjct: 583 SFVE--ELACGAYHVAVLTSR-TEVYTWGKGANGRLGHGSTDDRNTPTLV 629
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/265 (28%), Positives = 113/265 (42%), Gaps = 45/265 (16%)
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
S + S P + V +ACG+ H + GE + SWG G+LG G
Sbjct: 292 SKIDSLLPKALESVVVLDVQNIACGNRHAALVTKQGEVF--------SWGEEYGGRLGHG 343
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENG 228
PK+I+ S + V CG +HT +T L +T+G G +G
Sbjct: 344 GDSDAHHPKLIDAL---SNLNIELVACGEYHTCAVT--------LSGDLYTWGDGTYNSG 392
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
LGHG S VP++V Q +++ S+ CG +HT++V+SAG ++++G + G+ +
Sbjct: 393 LLGHGKDVSHWVPKRVTGPLQGLHISSISCGPWHTALVTSAGKLFTFG-DGTFGVLGHGD 451
Query: 289 LTRNEAGDAIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKL 336
D+IS P + K V+ ACG HT V + KL
Sbjct: 452 R------DSISIPREV-----ESLKGLRTVRAACGVWHTAAVVEVIIGNPNSNNNSSGKL 500
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIV 361
++WG G G LG G P V
Sbjct: 501 FTWGDGDKGRLGHGDKEARLVPTCV 525
Score = 65.5 bits (158), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 68/271 (25%), Positives = 110/271 (40%), Gaps = 48/271 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
+ I S+ G + + +AG L+ +G +G F ++ S P V
Sbjct: 415 LHISSISCGPWHTALVTSAGKLFTFG---------DGTFGVLGHGDRDSISIPREVESLK 465
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRP 178
G V+ ACG H A+V E G ++WG + G+LG GD+E+RL P
Sbjct: 466 GLRTVRAACGVWHTAAVV---EVIIGNPNSNNNSSGKLFTWGDGDKGRLGHGDKEARLVP 522
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ + + +V CG T LT+ +T G GQLG+
Sbjct: 523 TCVAALVEPN---FCQVACGHSLTVALTN--------SGHIYTMGSPVYGQLGNPQADGK 571
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
L P +V+ ++ + CG +H +V++S +V++WG KG N L D
Sbjct: 572 L-PARVEGKLSKSFVEELACGAYHVAVLTSRTEVYTWG--KG----ANGRLGHGSTDDRN 624
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
+P L+ K + +ACG T +
Sbjct: 625 TPTLV-----EALKDKQVKSIACGTNFTAAI 650
Score = 52.0 bits (123), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 55/118 (46%), Gaps = 26/118 (22%)
Query: 255 SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQ 314
++ CG H ++V+ G+V+SWG E G L GD+ + H PK
Sbjct: 312 NIACGNRHAALVTKQGEVFSWGEEYGGRL--------GHGGDSDA---------HHPKLI 354
Query: 315 DPVQ------VACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTIDFFAPAIVLWP 364
D + VACG HT VT G L++WG G SG+LG GK + + P V P
Sbjct: 355 DALSNLNIELVACGEYHTCAVTLSG-DLYTWGDGTYNSGLLGHGKDVSHWVPKRVTGP 411
>gi|444916088|ref|ZP_21236212.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444712767|gb|ELW53682.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 823
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/368 (26%), Positives = 138/368 (37%), Gaps = 99/368 (26%)
Query: 60 LEDDSKTNHKAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPD-------- 103
L DDS N P+ + + V AGG SLA+ + G LW WG+ L
Sbjct: 492 LGDDSTVNRLTPVSVSTASLTDVKNVAAGGFHSLALGSDGKLWSWGSNSLSQLGVSRDTL 551
Query: 104 ------------------SSTEGGFSLVSSFTPSPVWDFHGH------------------ 127
++ E +V S W ++G+
Sbjct: 552 GSRASPALVSGVSGVVAVAAGETHSLVVLSNGKVSAWGYNGYGQIGDGCSPVPTFYCSSP 611
Query: 128 -------TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
+++ VA G H +AL S D ++WG NN+GQLG G R RP
Sbjct: 612 TEPTNLFSILGVAAGQNHSLALRS--------DGTVWAWGRNNSGQLGDGSLVDRTRPVQ 663
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
+ N+ V V G +H+ L + W +G +GQLG GT ++
Sbjct: 664 VARLNR-----VVSVVAGLYHSLALRS--------DGTVWAWGDNGSGQLGDGTYFGQML 710
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P QV P +V+V G H+ + + G VW+WG + + GD
Sbjct: 711 PVQV---PGLSGVVAVAAGGRHSLALRADGTVWAWGYN-----------SNGQIGDGSDA 756
Query: 301 ILISGNGPHGPKF--QDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLG-TGKTIDFF 356
+I P F QD V VA G H+V V G ++ +WG+ SG LG D
Sbjct: 757 SIIYRPSPVKVLFSSQDVVMGVAAGDTHSVAVLSGG-RVRTWGQNDSGQLGYATNNTDRS 815
Query: 357 APAIVLWP 364
P V P
Sbjct: 816 TPGEVTLP 823
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 101/370 (27%), Positives = 138/370 (37%), Gaps = 90/370 (24%)
Query: 60 LEDDSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L + S T+ +P+++ + V G LA+ + G +W WG G +
Sbjct: 173 LGNGSTTDQSSPVEVSALSDIKGVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSN-T 231
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
TP G V V+ G H +AL D ++WG NN GQLG+G
Sbjct: 232 QYNTPQQAAVLKG--VASVSAGDSHSLALR--------WDGTVWAWGQNNQGQLGIGSFT 281
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
R P + V EV G FH L L+ W +G +GQLG G
Sbjct: 282 DRPSPVQVPRLT-----GVVEVAAGQFHALAL--------RLDGTVWAWGFNGSGQLGDG 328
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LG--------- 282
TT S P QV P +VSV G H+ V S G V++WG LG
Sbjct: 329 TTLSRSSPVQV---PGLTGVVSVAAGDGHSVAVLSDGRVYTWGRNSAGQLGDGSQDALPH 385
Query: 283 ----------LCPNASLTRNEA--------GDAISPILIS-------------------- 304
+C N L E GD S + ++
Sbjct: 386 PTPGQALLPFVCGNHRLEPEEQCDDGNSINGDGCSALCLAESGSSLCGDGIKAAAEACDD 445
Query: 305 GNGPHGP------KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
GN +G + + P VA GA T+ +DG KLW+WG SG LG T++ P
Sbjct: 446 GNLVNGDGCSFVCRLETPRLVA-GAKFTLFQKNDG-KLWAWGHNFSGQLGDDSTVNRLTP 503
Query: 359 AIVLWPPLTE 368
V LT+
Sbjct: 504 VSVSTASLTD 513
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 82/319 (25%), Positives = 117/319 (36%), Gaps = 77/319 (24%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V AGG +LA+ + LW WG G S SSF+P V G VV +A +
Sbjct: 94 VAAGGSHALAVLSDKTLWAWGR---NGDGQLGVGSTTSSFSPVKVPGRTGVEVVAMAAST 150
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
+ A++S G+ +WG N GQLG G + P + + + V+
Sbjct: 151 FNSAAVLSDGK--------VLTWGYNAYGQLGNGSTTDQSSPVEVSALSD-----IKGVS 197
Query: 197 CGSFHTALL------------------------THRKRPNDML----------------- 215
G +H L T P
Sbjct: 198 VGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVLKGVASVSAGDSHSLA 257
Query: 216 ---ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ W +G GQLG G+ P QV P+ +V V G FH + G V
Sbjct: 258 LRWDGTVWAWGQNNQGQLGIGSFTDRPSPVQV---PRLTGVVEVAAGQFHALALRLDGTV 314
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
W+WG L +L+R+ SP+ + P V VA G H+V V D
Sbjct: 315 WAWGFNGSGQLGDGTTLSRS------SPVQV-------PGLTGVVSVAAGDGHSVAVLSD 361
Query: 333 GYKLWSWGRGRSGVLGTGK 351
G ++++WGR +G LG G
Sbjct: 362 G-RVYTWGRNSAGQLGDGS 379
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 123/295 (41%), Gaps = 47/295 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDF-HGHTVVKV 132
AG +L + G++W WG L D +T + L S+ PV DF +G V +V
Sbjct: 42 AAAGEAYTLIQRDDGSVWTWGANSGGQLGDGTTA--YRLASA----PV-DFSNGMVVKRV 94
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G H +A++S D ++WG N +GQLG+G S P + V
Sbjct: 95 AAGGSHALAVLS--------DKTLWAWGRNGDGQLGVGSTTSSFSPVKVPGRTGVE---V 143
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+ +F++A + + + T+G GQLG+G+T P +V L
Sbjct: 144 VAMAASTFNSAAV--------LSDGKVLTWGYNAYGQLGNGSTTDQSSPVEVSALSD--- 192
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+ V G +H + S G VW+WG L + + +L
Sbjct: 193 IKGVSVGKYHMLALRSGGTVWAWGFNGSGQLGLGSGSNTQYNTPQQAAVL---------- 242
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLT 367
+ V+ G +H++ + DG +W+WG+ G LG G D +P V P LT
Sbjct: 243 -KGVASVSAGDSHSLALRWDG-TVWAWGQNNQGQLGIGSFTDRPSPVQV--PRLT 293
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 90/217 (41%), Gaps = 30/217 (13%)
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
++ D ++WG N +GQLG +RL P + T + V V G FH+ L
Sbjct: 474 FQKNDGKLWAWGHNFSGQLGDDSTVNRLTPVSVSTASLTD---VKNVAAGGFHSLALGS- 529
Query: 209 KRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
+ W++G QLG T S P V + V + + + H+ VV
Sbjct: 530 -------DGKLWSWGSNSLSQLGVSRDTLGSRASPALVSGVSGVVAVAAGET---HSLVV 579
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI-LISGNGPHGP-KFQDPVQVACGAA 324
S G V +WG G G + GD SP+ + P P + VA G
Sbjct: 580 LSNGKVSAWGY-NGYG----------QIGDGCSPVPTFYCSSPTEPTNLFSILGVAAGQN 628
Query: 325 HTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
H++ + DG +W+WGR SG LG G +D P V
Sbjct: 629 HSLALRSDG-TVWAWGRNNSGQLGDGSLVDRTRPVQV 664
>gi|358419997|ref|XP_003584389.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator [Bos
taurus]
Length = 538
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 89/332 (26%), Positives = 143/332 (43%), Gaps = 63/332 (18%)
Query: 52 LTIGAPDSLEDDS---------KTNHKAPIKI-------CSVKAGGMMSLAIDNAGALWM 95
+T+G PD + DS K P K S+ G + L+M
Sbjct: 44 ITMGEPDKMVPDSGAVFTFGKTKFAENMPSKFWFKRDIPISLSCGDEHTAITTGNNKLFM 103
Query: 96 WGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
+G S+ G L S T P+ + V VACG H + L G+
Sbjct: 104 FG------SNNWGQLGLGSKATVNKPTCIKALKPEKVKFVACGRNHTLILTGGGQ----- 152
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
Y+ G NN GQLGLGD + R +I F S + +++ GS +A LT
Sbjct: 153 ---VYATGGNNEGQLGLGDTDERSAFHLISFFT--SQHKIKQLSAGSNTSAALTE----- 202
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+ + +G GQ+G + VP QV + + + +S CG +H++ V++ G++
Sbjct: 203 ---DGELFMWGDNSEGQIGLQNITNICVPHQVT-IGKPISWIS--CGYYHSAFVTTEGEL 256
Query: 273 WSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
+++G E G LGL P + P L+ G + +QVACG HTV++T
Sbjct: 257 YTFGEPESGKLGLPPKLLVNHK------VPQLVPGIS------EKVIQVACGGGHTVVLT 304
Query: 331 DDGYKLWSWGRGRSGVLGTGK-TIDFFAPAIV 361
+ ++++G G+ G LG G T + P ++
Sbjct: 305 EKA--VYTFGLGQFGQLGLGTFTFETSEPKVI 334
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 88/201 (43%), Gaps = 36/201 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + AG S A+ G L+MWG+ +S + G +++ P G + +
Sbjct: 186 KIKQLSAGSNTSAALTEDGELFMWGD----NSEGQIGLQNITNIC-VPHQVTIGKPISWI 240
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL------GDRESRLRPKIIETFNQ 186
+CG H + + GE Y++G +G+LGL + +L P I E
Sbjct: 241 SCGYYHSAFVTTEGE--------LYTFGEPESGKLGLPPKLLVNHKVPQLVPGISE---- 288
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V +V CG HT +LT E +TFGLG+ GQLG GT +V E
Sbjct: 289 ----KVIQVACGGGHTVVLT---------EKAVYTFGLGQFGQLGLGTFTFETSEPKVIE 335
Query: 247 LPQYVYLVSVDCGLFHTSVVS 267
+ + V CG HT++++
Sbjct: 336 SVKDKKISHVCCGENHTALIT 356
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 69/271 (25%), Positives = 111/271 (40%), Gaps = 56/271 (20%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
P K+ V G +L + G ++ G L D+ F L+S FT
Sbjct: 131 PEKVKFVACGRNHTLILTGGGQVYATGGNNEGQLGLGDTDERSAFHLISFFTSQ------ 184
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
H + +++ GS AL GE + WG N+ GQ+GL + + P + T
Sbjct: 185 -HKIKQLSAGSNTSAALTEDGE--------LFMWGDNSEGQIGLQNITNICVPHQV-TIG 234
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ W ++CG +H+A +T E +TFG E+G+LG LV +V
Sbjct: 235 KPISW----ISCGYYHSAFVT--------TEGELYTFGEPESGKLG--LPPKLLVNHKVP 280
Query: 246 ELPQYV--YLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAIS 299
+L + ++ V CG HT V++ V+++G+ + GLG +
Sbjct: 281 QLVPGISEKVIQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTF---------TFETSE 330
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
P +I K + V CG HT L+T
Sbjct: 331 PKVI-----ESVKDKKISHVCCGENHTALIT 356
>gi|55249804|gb|AAH85921.1| Herc6 protein, partial [Rattus norvegicus]
Length = 1034
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 50/299 (16%)
Query: 56 APDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFS 111
+P S + + + I V G S+A+ + G ++ WG + +EG G S
Sbjct: 64 SPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG------AGSEGQLGIGES 117
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
SF P+ + G +++V+CG H +AL ED +SWG+N GQLGLG+
Sbjct: 118 KEISFMPTKINSLAGIKIIQVSCGHYHSLAL--------SEDGQVFSWGSNRQGQLGLGN 169
Query: 172 RE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--G 228
S+ P+ +++ + P A +V G H+ L+ M +FG G N G
Sbjct: 170 NLCSQASPQKVKSL-EGIPLA--QVAAGGTHSFALS----------LMGTSFGWGNNRSG 216
Query: 229 QL---GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
QL G+ + P + L + + +V + CG HTSV++ G V+++G L
Sbjct: 217 QLALSGNSAKEQIYKPHSIGAL-KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQH 275
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ R P LI G G H Q+ CG+ HT+ ++ S GRG S
Sbjct: 276 SPRSGRG------GPQLIEGIGGHVS------QIECGSYHTIAYVYTTGQVVSLGRGPS 322
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G ++K A G H + L S Y S G N+ GQLG +S RP+ I+
Sbjct: 27 GLKLLKAASGERHSLLLFSNHRVY--------SCGDNSRGQLGQKSPQSTKRPEPIQAL- 77
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV 244
S + V+CG H+ + H+ R +T+G G GQLG G ++ + +P ++
Sbjct: 78 --STVHIDLVSCGKEHSVAVCHQGR--------VFTWGAGSEGQLGIGESKEISFMPTKI 127
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAI 298
L + ++ V CG +H+ +S G V+SWG + GLG LC AS + ++ + I
Sbjct: 128 NSLAG-IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI 186
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P+ QVA G H+ ++ G + WG RSG L
Sbjct: 187 -PL---------------AQVAAGGTHSFALSLMGTS-FGWGNNRSGQLA 219
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 33/237 (13%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPS 119
+K N A IKI V G SLA+ G ++ WG S+ +G G +L S +P
Sbjct: 125 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG------SNRQGQLGLGNNLCSQASPQ 178
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
V G + +VA G H AL G + + WG N +GQL L ++ +
Sbjct: 179 KVKSLEGIPLAQVAAGGTHSFALSLMGTS--------FGWGNNRSGQLALSGNSAKEQIY 230
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ V ++CG HT++LT + +TFG + QL H
Sbjct: 231 KPHSIGALKTLNVVYISCGYEHTSVLTE--------DGQVFTFGGSSSEQLQHSPRSGRG 282
Query: 240 VPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
P+ ++ + +V ++CG +HT + V + G V S G +G NA T EA
Sbjct: 283 GPQLIEGIGGHV--SQIECGSYHTIAYVYTTGQVVSLG--RGPSCTSNA--THQEAA 333
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R +P+ +E + + + G H+ LL R ++ G GQLG +
Sbjct: 16 RRQPRRLEA---GTGLKLLKAASGERHSLLLFSNHR--------VYSCGDNSRGQLGQKS 64
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRN 292
QS PE ++ L V++ V CG H+ V G V++WG E LG+ + ++
Sbjct: 65 PQSTKRPEPIQALST-VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-- 121
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P I N G K +QV+CG H++ +++DG +++SWG R G LG G
Sbjct: 122 -----FMPTKI--NSLAGIKI---IQVSCGHYHSLALSEDG-QVFSWGSNRQGQLGLGNN 170
Query: 353 I 353
+
Sbjct: 171 L 171
>gi|426232148|ref|XP_004010096.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Ovis aries]
Length = 992
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 97/219 (44%), Gaps = 35/219 (15%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFH 125
A IKI V G SLA+ G ++ WG ++ G L F +P V
Sbjct: 98 ADIKIIQVACGHYHSLALSEDGQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLE 151
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES---RLRPKIIE 182
G + +VA G H AL +G + + WG+NN GQL L + R +P ++
Sbjct: 152 GIPLAQVAAGGAHSFALSLSGTS--------FGWGSNNAGQLALSGNNAPVQRYKPVLVG 203
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
S V ++CG HTA+LT + +TFG GQLGH +T P+
Sbjct: 204 ALKTLS---VVFISCGYEHTAVLTQ--------DGKVFTFGDNSYGQLGHDSTAEKRGPQ 252
Query: 243 QVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKG 280
V+ + V +DCG +HT + V + G V S+G G
Sbjct: 253 LVERIEGLV--SQIDCGSYHTLAYVYTTGQVVSFGRGPG 289
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 122/281 (43%), Gaps = 50/281 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSL----VSSFTPSPVWDFHGH 127
+ + V G SLA+ + G ++ WG +++EG + ++F P +
Sbjct: 47 LHVALVSCGKEHSLAVCHKGRVFAWG------AASEGQLGIGELKETTFIPKKIKTLADI 100
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQ 186
+++VACG H +AL ED +SWG N++GQLGLG S+ P+ + + +
Sbjct: 101 KIIQVACGHYHSLAL--------SEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-E 151
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL---GHGTTQSALVPEQ 243
P A +V G H+ L+ L + +G GQL G+ P
Sbjct: 152 GIPLA--QVAAGGAHSFALS--------LSGTSFGWGSNNAGQLALSGNNAPVQRYKPVL 201
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI-- 301
V L + + +V + CG HT+V++ G V+++G + G + S + I
Sbjct: 202 VGAL-KTLSVVFISCGYEHTAVLTQDGKVFTFG-DNSYGQLGHDSTAEKRGPQLVERIEG 259
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
L+S Q+ CG+ HT+ ++ S+GRG
Sbjct: 260 LVS-------------QIDCGSYHTLAYVYTTGQVVSFGRG 287
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 109/273 (39%), Gaps = 67/273 (24%)
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H + L+S G S G N+ GQLG R+ R + E V
Sbjct: 3 GEHHSLLLLSDG--------TVQSCGDNSRGQLG---RKGTPRGEQPERIPALETLHVAL 51
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYL 253
V+CG H+ + H+ R + +G GQLG G ++ +P+++K L + +
Sbjct: 52 VSCGKEHSLAVCHKGR--------VFAWGAASEGQLGIGELKETTFIPKKIKTLAD-IKI 102
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISPILISGNG 307
+ V CG +H+ +S G V+SWG + GLG AS R + + I ++ G
Sbjct: 103 IQVACGHYHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGG 162
Query: 308 PH-------GPKF---------------QDPVQ-----------------VACGAAHTVL 328
H G F PVQ ++CG HT +
Sbjct: 163 AHSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAV 222
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+T DG K++++G G LG T + P +V
Sbjct: 223 LTQDG-KVFTFGDNSYGQLGHDSTAEKRGPQLV 254
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/237 (24%), Positives = 96/237 (40%), Gaps = 36/237 (15%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVI-EQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGM 82
Y SL DGQ+ G NS + ++F + +P + I + V AGG
Sbjct: 110 YHSLALSEDGQVFSWGKNSHGQLGLGKEFPSQASPQ------RVRSLEGIPLAQVAAGGA 163
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVAL 142
S A+ +G + WG+ + G + V + P V +VV ++CG EH L
Sbjct: 164 HSFALSLSGTSFGWGSNNAGQLALSGNNAPVQRYKPVLVGALKTLSVVFISCGYEHTAVL 223
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G+ +++G N+ GQLG + P+++E V ++ CGS+HT
Sbjct: 224 TQDGKV--------FTFGDNSYGQLGHDSTAEKRGPQLVERIEG----LVSQIDCGSYHT 271
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGT--TQSALVPEQVKELPQYVYLVSVD 257
+ + + G+ G G T+S+ PE + E L+S +
Sbjct: 272 ---------------LAYVYTTGQVVSFGRGPGCTRSSPHPEALAESSDVSCLISAN 313
>gi|308535275|ref|YP_002138732.2| hypothetical protein [Geobacter bemidjiensis Bem]
gi|308052620|gb|ACH38936.2| LOW QUALITY PROTEIN: ATS1 domain repeat protein [Geobacter
bemidjiensis Bem]
Length = 1917
Score = 80.5 bits (197), Expect = 2e-12, Method: Composition-based stats.
Identities = 83/310 (26%), Positives = 126/310 (40%), Gaps = 54/310 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGF 110
L D + N P++I S+ AG +LA+ + G LW WG L D +T
Sbjct: 1126 LGDGTTVNRYVPVQIGDDNKWISISAGVDFTLALKSDGTLWGWGRNDLGQLGDGTT---- 1181
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG 170
+F SPV + + + G H AL S G ++WG N NGQ+G G
Sbjct: 1182 ----TFRYSPVQIGNSTDWISIHAGGYHAAALKSDG--------TLWAWGGNYNGQVGNG 1229
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ- 229
++L P I T D W ++ G HT L + N L W +G +GQ
Sbjct: 1230 STLNQLFPLQIGT---DRSWTA--ISAGGAHTLAL----KANGTL----WGWGSNSSGQV 1276
Query: 230 -LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
LG+G+ P ++ + + G +H+ + + +W WG + G N
Sbjct: 1277 GLGYGSLAQYTSPTRIGTAGNWKL---ISAGTYHSMALQTDNTLWGWGSNQ-YGQLGNG- 1331
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
T + G P+ I + V+ HTV + +G LW+WGR SG LG
Sbjct: 1332 -TTSSYGQLSFPVKIG-------SVSNWSSVSAAYGHTVALDLNG-ALWAWGRNSSGELG 1382
Query: 349 TGKTIDFFAP 358
++D P
Sbjct: 1383 DATSVDKVYP 1392
Score = 75.9 bits (185), Expect = 4e-11, Method: Composition-based stats.
Identities = 73/283 (25%), Positives = 114/283 (40%), Gaps = 49/283 (17%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V AG ++A+ + G LW WG G + V+ + P + D + + ++ G
Sbjct: 1099 VSAGTRHTIALKSDGTLWSWGYNAF---GQLGDGTTVNRYVPVQIGD--DNKWISISAGV 1153
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
+ +AL S G + WG N+ GQLG G R P I + W +
Sbjct: 1154 DFTLALKSDG--------TLWGWGRNDLGQLGDGTTTFRYSPVQI---GNSTDWI--SIH 1200
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G +H A L + W +G NGQ+G+G+T + L P Q+ + ++
Sbjct: 1201 AGGYHAAALKS--------DGTLWAWGGNYNGQVGNGSTLNQLFPLQIGTDRSW---TAI 1249
Query: 257 DCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
G HT + + G +W WG + GLG A T SP I G
Sbjct: 1250 SAGGAHTLALKANGTLWGWGSNSSGQVGLGYGSLAQYT--------SPTRIGTAG----- 1296
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ ++ G H++ + D LW WG + G LG G T +
Sbjct: 1297 --NWKLISAGTYHSMALQTDN-TLWGWGSNQYGQLGNGTTSSY 1336
Score = 73.6 bits (179), Expect = 3e-10, Method: Composition-based stats.
Identities = 77/302 (25%), Positives = 123/302 (40%), Gaps = 54/302 (17%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + T +P++I S+ AGG + A+ + G LW WG + G S +
Sbjct: 1176 LGDGTTTFRYSPVQIGNSTDWISIHAGGYHAAALKSDGTLWAWGG---NYNGQVGNGSTL 1232
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG--D 171
+ P + T + + G H +AL + G + WG+N++GQ+GLG
Sbjct: 1233 NQLFPLQIGTDRSWTAI--SAGGAHTLALKANG--------TLWGWGSNSSGQVGLGYGS 1282
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
P I T W + ++ G++H+ L ++ W +G + GQLG
Sbjct: 1283 LAQYTSPTRIGTAGN---WKL--ISAGTYHSMAL--------QTDNTLWGWGSNQYGQLG 1329
Query: 232 HGTTQS---ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
+GTT S P ++ + + SV HT + G +W+WG L S
Sbjct: 1330 NGTTSSYGQLSFPVKIGSVSNWS---SVSAAYGHTVALDLNGALWAWGRNSSGELGDATS 1386
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ D + P+ I N + G ++TV DG LW+WG G LG
Sbjct: 1387 V------DKVYPVRIGTNATW-------TTMETGDSYTVASKSDG-TLWAWGNNWYGGLG 1432
Query: 349 TG 350
G
Sbjct: 1433 DG 1434
Score = 58.9 bits (141), Expect = 6e-06, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V+ G+ HT L + W++G GQLG GTT + VP Q+ + ++
Sbjct: 1098 KVSAGTRHTIALKS--------DGTLWSWGYNAFGQLGDGTTVNRYVPVQIGDDNKW--- 1146
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+S+ G+ T + S G +W WG LG + + T SP+ I GN
Sbjct: 1147 ISISAGVDFTLALKSDGTLWGWG-RNDLGQLGDGTTTFR-----YSPVQI-GNS------ 1193
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
D + + G H + DG LW+WG +G +G G T++ P
Sbjct: 1194 TDWISIHAGGYHAAALKSDG-TLWAWGGNYNGQVGNGSTLNQLFP 1237
Score = 56.6 bits (135), Expect = 3e-05, Method: Composition-based stats.
Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 46/248 (18%)
Query: 64 SKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF---SLVS 114
S N P++I ++ AGG +LA+ G LW WG+ +SS + G SL
Sbjct: 1230 STLNQLFPLQIGTDRSWTAISAGGAHTLALKANGTLWGWGS----NSSGQVGLGYGSLAQ 1285
Query: 115 SFTPSPV-----WDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+P+ + W ++ G+ H +AL + D + WG+N GQLG
Sbjct: 1286 YTSPTRIGTAGNWKL-------ISAGTYHSMALQT--------DNTLWGWGSNQYGQLGN 1330
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
G S + S W+ V+ HT L L W +G +G+
Sbjct: 1331 GTTSSYGQLSFPVKIGSVSNWS--SVSAAYGHTVALD--------LNGALWAWGRNSSGE 1380
Query: 230 LGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
LG T+ + P ++ + +++ G +T S G +W+WG GL +
Sbjct: 1381 LGDATSVDKVYPVRIGTNATW---TTMETGDSYTVASKSDGTLWAWGNNWYGGLGDGTAS 1437
Query: 290 TRNEAGDA 297
R+ A A
Sbjct: 1438 ERDGATTA 1445
Score = 43.9 bits (102), Expect = 0.21, Method: Composition-based stats.
Identities = 31/111 (27%), Positives = 44/111 (39%), Gaps = 14/111 (12%)
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
PQ V G HT + S G +WSWG L ++ R P+ I +
Sbjct: 1091 PQQTVFSKVSAGTRHTIALKSDGTLWSWGYNAFGQLGDGTTVNR------YVPVQIGDDN 1144
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ ++ G T+ + DG LW WGR G LG G T ++P
Sbjct: 1145 KW-------ISISAGVDFTLALKSDG-TLWGWGRNDLGQLGDGTTTFRYSP 1187
>gi|326664251|ref|XP_688463.5| PREDICTED: probable E3 ubiquitin-protein ligase HERC4 [Danio rerio]
Length = 992
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 32/247 (12%)
Query: 119 SPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR- 177
SP+ V+++ACG +H +AL + G+ + WG N GQLGL ++ +
Sbjct: 110 SPLKGLENRQVIQIACGDQHSMALTNDGQ--------LFVWGENALGQLGLRKEQAGTQS 161
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+ +++ V +++ G H+ +L+ L + + +G GQLG G T
Sbjct: 162 PRHLQSL---CGIPVAQISAGGNHSFVLS--------LSGVVFGWGGNSAGQLGLGDTTD 210
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
VP V L + +VS+ CG HT+ ++ G V+++G G G L N D
Sbjct: 211 RFVPTVVNSLKRK-KIVSISCGGEHTAALAKGGTVFTFG-SGGFG-----QLGHNSFKDE 263
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
P L++ G K QV CG HT++ T ++S+G G G LG G+ +
Sbjct: 264 HHPRLVAE--LWGSKVS---QVTCGRNHTLVSTASPKLIYSFGCGMQGQLGNGEQVKQSV 318
Query: 358 PAIVLWP 364
P V P
Sbjct: 319 PLPVDQP 325
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 95/215 (44%), Gaps = 29/215 (13%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVV 130
++ + G S+A+ N G L++WG L + G + T SP + G V
Sbjct: 119 QVIQIACGDQHSMALTNDGQLFVWGENAL----GQLGLRKEQAGTQSPRHLQSLCGIPVA 174
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+++ G H L +G V + WG N+ GQLGLGD R P ++ + +
Sbjct: 175 QISAGGNHSFVLSLSG--------VVFGWGGNSAGQLGLGDTTDRFVPTVVNSLKRKK-- 224
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++CG HTA L +TFG G GQLGH + + P V EL
Sbjct: 225 -IVSISCGGEHTAALAK--------GGTVFTFGSGGFGQLGHNSFKDEHHPRLVAEL-WG 274
Query: 251 VYLVSVDCGLFHTSV-VSSAGDVWSW--GMEKGLG 282
+ V CG HT V +S ++S+ GM+ LG
Sbjct: 275 SKVSQVTCGRNHTLVSTASPKLIYSFGCGMQGQLG 309
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 78/182 (42%), Gaps = 27/182 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF-SLVSSFTPSPVWDFHGHTVV 130
I + + AGG S + +G ++ WG +S+ + G F P+ V +V
Sbjct: 171 IPVAQISAGGNHSFVLSLSGVVFGWGG----NSAGQLGLGDTTDRFVPTVVNSLKRKKIV 226
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CG EH AL G +++G+ GQLG + P+++ W
Sbjct: 227 SISCGGEHTAALAKGG--------TVFTFGSGGFGQLGHNSFKDEHHPRLVAEL-----W 273
Query: 191 A--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +VTCG HT + T + + ++FG G GQLG+G VP V +
Sbjct: 274 GSKVSQVTCGRNHTLVSTASPK-------LIYSFGCGMQGQLGNGEQVKQSVPLPVDQPT 326
Query: 249 QY 250
+Y
Sbjct: 327 EY 328
>gi|86129504|ref|NP_001034387.1| probable E3 ubiquitin-protein ligase HERC3 [Gallus gallus]
gi|60098971|emb|CAH65316.1| hypothetical protein RCJMB04_17g7 [Gallus gallus]
Length = 1050
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/296 (25%), Positives = 137/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTV 129
I V G S+A+ + G ++ WG + ++G L + P + + T+
Sbjct: 86 IVHVACGESHSVALSDQGQVFSWG------AGSDGQLGLTTIEDAVTVPRLIKKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++++CG+ H +AL + G+ + +WG N+ GQLGLG S+ P+ +++ +
Sbjct: 140 LQISCGNWHCLALAADGQFF--------TWGQNSYGQLGLGKECPSQASPQRVKSLD-GI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G +GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGKNSSGQLGLSDERDRESPCHVKLL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RSQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVSQIACGRHHTLAFVPSSGMIYAFGCGTRGQLGTGHTCNVKCPSPV 341
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 48/253 (18%)
Query: 118 PSP-VWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P V+ F H V +VACG H V L+ GE Y + G N GQLG S+
Sbjct: 23 PEPQVYGFIHDRNVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLGHESEGSK 74
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P + + V CG H+ L+ + + +++G G +GQLG T
Sbjct: 75 PEP-----IGALAGQHIVHVACGESHSVALSDQGQ--------VFSWGAGSDGQLGLTTI 121
Query: 236 QSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGL-CPN-AS 288
+ A+ VP +K+L Q ++ + CG +H +++ G ++WG + GLG CP+ AS
Sbjct: 122 EDAVTVPRLIKKLNQQT-ILQISCGNWHCLALAADGQFFTWGQNSYGQLGLGKECPSQAS 180
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R ++ D I P+ QVA G AH+ ++ G ++ WG+ SG LG
Sbjct: 181 PQRVKSLDGI-PL---------------AQVAAGGAHSFALSLSG-AVFGWGKNSSGQLG 223
Query: 349 TGKTIDFFAPAIV 361
D +P V
Sbjct: 224 LSDERDRESPCHV 236
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG +SS + G S +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWGK----NSSGQLGLSDERDRESPCHVKLLRSQKVV 245
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSP 189
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 246 YISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE-- 295
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ M + FG G GQLG G T + P VK
Sbjct: 296 --VSQIACGRHHTLAFV----PSS---GMIYAFGCGTRGQLGTGHTCNVKCPSPVK 342
>gi|218189796|gb|EEC72223.1| hypothetical protein OsI_05329 [Oryza sativa Indica Group]
gi|222619928|gb|EEE56060.1| hypothetical protein OsJ_04872 [Oryza sativa Japonica Group]
Length = 910
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/292 (25%), Positives = 124/292 (42%), Gaps = 48/292 (16%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D++G +++WG +S G ++V S P P+ V CG +H
Sbjct: 32 DSSGDVYVWGEVICDNSVRTGSDTVVRSTVRTDVLRPKPLESNLVLDAYHVDCGVKHSAL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ GE + +WG + G+LG G RE + P++IE+ + V V CG FH
Sbjct: 92 VTKNGEVF--------TWGEESGGRLGHGSREDSIHPRLIESL---AVCNVDIVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHG S +P+++ + + + V CG +
Sbjct: 141 TCAVT------TAGELYTWGDGTHNVGLLGHGKDVSHWIPKRIAGALEGLAVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
HT+++++ G ++++ G LG S++ + +++S + + V
Sbjct: 195 HTALITTMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSGL-------------KTISV 241
Query: 320 ACGAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
ACG HT V+VT KL++WG G LG G P V
Sbjct: 242 ACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCV 293
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 96/336 (28%), Positives = 142/336 (42%), Gaps = 72/336 (21%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V G S + G ++ WG G S S P + V VACG
Sbjct: 82 VDCGVKHSALVTKNGEVFTWGE---ESGGRLGHGSREDSIHPRLIESLAVCNVDIVACGE 138
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H A+ +AGE Y D G +N G LG G S PK I + AV V+
Sbjct: 139 FHTCAVTTAGELYTWGD------GTHNVGLLGHGKDVSHWIPKRIAGALEG--LAVAYVS 190
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
CG++HTAL+T +TFG G G LGHG +S P++V+ L + +SV
Sbjct: 191 CGTWHTALIT--------TMGQLFTFGDGTFGVLGHGNRESISCPKEVESLSG-LKTISV 241
Query: 257 DCGLFHTSVV-----------SSAGDVWSWG---------MEKGLGLCPN--ASLT---- 290
CG++HT+ + S+G +++WG +K L P ASL
Sbjct: 242 ACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEPRLKPTCVASLIDYDF 301
Query: 291 -RNEAGDAIS-------PILISGNGPHG----PKF-------------QDPVQVACGAAH 325
R G +++ +L GN +G P+ ++ VQVACG+ H
Sbjct: 302 HRIACGHSLTVGLTTSGKVLSMGNTVYGQLGNPRSDGKIPCLVEEIVGENVVQVACGSYH 361
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++T ++++WG+G +G LG G D P +V
Sbjct: 362 VAVLTIKS-EVFTWGKGANGRLGHGDIEDRKIPTLV 396
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 88/218 (40%), Gaps = 33/218 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV---CYSWGANNNGQLGLGDRES 174
P V G + VACG H A+V T + ++WG + +LG GD+E
Sbjct: 227 PKEVESLSGLKTISVACGVWHTAAIVEVIVTQSSSSISSGKLFTWGDGDKHRLGHGDKEP 286
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
RL+P + + + + + CG T LT + G GQLG+
Sbjct: 287 RLKPTCVASLID---YDFHRIACGHSLTVGLT--------TSGKVLSMGNTVYGQLGNPR 335
Query: 235 TQSA---LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTR 291
+ LV E V E +V V CG +H +V++ +V++WG KG N L
Sbjct: 336 SDGKIPCLVEEIVGE-----NVVQVACGSYHVAVLTIKSEVFTWG--KG----ANGRLGH 384
Query: 292 NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
+ D P L+ + + +ACGA T +
Sbjct: 385 GDIEDRKIPTLVE-----ALRDRSVRHIACGANFTAAI 417
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 49/102 (48%), Gaps = 11/102 (10%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P V + G VV+VACGS HV L T K E ++WG NG+LG GD E R
Sbjct: 341 PCLVEEIVGENVVQVACGSYHVAVL-----TIKSE---VFTWGKGANGRLGHGDIEDRKI 392
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
P ++E S V + CG+ TA + K + +S C
Sbjct: 393 PTLVEALRDRS---VRHIACGANFTAAICQHKWVSGAEQSQC 431
>gi|428174549|gb|EKX43444.1| hypothetical protein GUITHDRAFT_61168, partial [Guillardia theta
CCMP2712]
Length = 308
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 102/221 (46%), Gaps = 29/221 (13%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V ACG H VAL G YSWG NG LG G+ +S+L PK ++ S
Sbjct: 1 VGAACGKLHTVALTEEGRV--------YSWGC-ANGALGHGNSKSQLLPKALDRPLIYSM 51
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
++ + CG FHT + + WT+G + GQLGHG ++ +P +V+ L +
Sbjct: 52 PSITTIACGEFHTLAVGQ--------DGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEK 103
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ + G H+ V++ A V+++G L + + + A D +S + SG
Sbjct: 104 KI-CIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLESKVKYSAAPDIVSRLRRSG---- 158
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ CG +H++ + +L+SWGR G LG G
Sbjct: 159 ------VCHITCGYSHSMALLKS-EQLYSWGRNDCGQLGLG 192
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 100/226 (44%), Gaps = 24/226 (10%)
Query: 63 DSKTNHKAP-------IKIC-SVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
D KT HK P KIC AGG SL + A ++ +G+ E +
Sbjct: 88 DCKT-HKLPRRVEALEKKICIKAAAGGQHSLVLTEANKVYAFGSNVFGQLGLES--KVKY 144
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
S P V V + CG H +AL+ K E L YSWG N+ GQLGLG S
Sbjct: 145 SAAPDIVSRLRRSGVCHITCGYSHSMALL------KSEQL--YSWGRNDCGQLGLGHYRS 196
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
P+ + F + V +++CG H A ++ P +T+G GE GQLGH
Sbjct: 197 SPVPEHLTMFKKSQ---VQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHD 253
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
S VP+ V+ L + +V G F ++ + A +++WG +
Sbjct: 254 ELYSRCVPKVVQTLLARG-IRAVAAGGFSSAAIDEAKQLYTWGCSR 298
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 66/296 (22%), Positives = 119/296 (40%), Gaps = 51/296 (17%)
Query: 80 GGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSE 137
G + ++A+ G ++ WG N L +++ L+ P+ + ++ +ACG
Sbjct: 6 GKLHTVALTEEGRVYSWGCANGALGHGNSKS--QLLPKALDRPLI-YSMPSITTIACGEF 62
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
H +A+ G+D ++WG N GQLG GD ++ P+ +E + +
Sbjct: 63 HTLAV--------GQDGTLWTWGRNQYGQLGHGDCKTHKLPRRVEALEKK---ICIKAAA 111
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-HGTTQSALVPEQVKELPQYVYLVSV 256
G H+ +LT + + FG GQLG + + P+ V L + + +
Sbjct: 112 GGQHSLVLTEANK--------VYAFGSNVFGQLGLESKVKYSAAPDIVSRL-RRSGVCHI 162
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD-AISPILISGNGPHGPKFQD 315
CG H+ + + ++SWG RN+ G + S H F+
Sbjct: 163 TCGYSHSMALLKSEQLYSWG--------------RNDCGQLGLGHYRSSPVPEHLTMFKK 208
Query: 316 P--VQVACGAAHTVLVTDDGY--------KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q++CG H + + K+++WGRG G LG + P +V
Sbjct: 209 SQVQQISCGYDHNIAFVSEYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVV 264
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 21/164 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C + G S+A+ + L+ WG D G SS P + F V +++
Sbjct: 159 VCHITCGYSHSMALLKSEQLYSWGR---NDCGQLGLGHYRSSPVPEHLTMFKKSQVQQIS 215
Query: 134 CGSEHVVALVSAGETYKGEDL----VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
CG +H +A VS Y G + Y+WG GQLG + SR PK+++T
Sbjct: 216 CGYDHNIAFVS---EYAGPGVPPLEKVYTWGRGEEGQLGHDELYSRCVPKVVQTLLAR-- 270
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ V G F +A + K+ +T+G GQLGHG
Sbjct: 271 -GIRAVAAGGFSSAAIDEAKQ--------LYTWGCSREGQLGHG 305
>gi|21619468|gb|AAH31624.1| RPGR protein [Homo sapiens]
gi|119579847|gb|EAW59443.1| retinitis pigmentosa GTPase regulator, isoform CRA_c [Homo sapiens]
gi|325464495|gb|ADZ16018.1| retinitis pigmentosa GTPase regulator [synthetic construct]
Length = 480
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 110/235 (46%), Gaps = 37/235 (15%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P+ V V ACG H + G Y + G NN GQLGLGD E R
Sbjct: 78 PTCVKALKPEKVKLAACGRNHTLVSTEGGNVY--------ATGGNNEGQLGLGDTEERNT 129
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
+I F S + +++ GS +A LT R + +G GQ+G +
Sbjct: 130 FHVISFFT--SEHKIKQLSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSN 179
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAG 295
VP+QV + + V +S CG +H++ V++ G+++ +G E G LGL PN L +
Sbjct: 180 VCVPQQVT-IGKPVSWIS--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLLGNHRTP 235
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+S I + +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 236 QLVSEIP-----------EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/217 (29%), Positives = 102/217 (47%), Gaps = 32/217 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + AG S A+ G L+MWG+ +S + G VS+ P G V +
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVC-VPQQVTIGKPVSWI 195
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPW 190
+CG H + + GE Y +G NG+LGL ++ + P+++ + P
Sbjct: 196 SCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLV----SEIPE 243
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V +V CG HT +LT E+ +TFGLG+ GQLG GT +V E +
Sbjct: 244 KVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIRD 294
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ + CG HT++++ G ++++G + GLGL
Sbjct: 295 QTISYISCGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>gi|297811737|ref|XP_002873752.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297319589|gb|EFH50011.1| regulator of chromosome condensation family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 396
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 100/368 (27%), Positives = 147/368 (39%), Gaps = 62/368 (16%)
Query: 25 TSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK---TNHKAPIKICSVKAGG 81
SL C DG+L G N Q T+G P + +S A +KI GG
Sbjct: 49 NSLAICDDGKLFTWGWN--------QRGTLGHPPETKTESTPSLVKSLASVKIVQAAIGG 100
Query: 82 MMSLAIDNAGALWMWG-----NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
LA+D+ G + WG C S E G + P TV +VA G
Sbjct: 101 WHCLAVDDQGRAYAWGGNEYGQCGEEPSKDETGRPVRRDIV-IPKRCAPQLTVRQVAAGG 159
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H V L G ++WG GD + P ++ V +
Sbjct: 160 THSVVLTREG--------YVWTWGQ----PWPPGDIKQISIPVRVQGLEN-----VRLIA 202
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G+FH L + W +G E GQLG G TQ P V+ L + LV +
Sbjct: 203 VGAFHNLALKE--------DGTLWAWGNNEYGQLGTGDTQPRSFPIPVQGLDD-LTLVDI 253
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI---LISGNGPHGPKF 313
G +H++ +++ G+V+ WG G N+ + P L++G
Sbjct: 254 AAGGWHSTALTNEGEVYGWGR----GEHGRLGFGDNDKSSKMLPQKVNLLAG-------- 301
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP--AIVLWPPLTEEFK 371
+D +QV+CG H+V +T DG +++S+GRG G LG G+ + P + PPL F
Sbjct: 302 EDIIQVSCGGTHSVALTRDG-RIFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGRFN 360
Query: 372 Q-DELNTG 378
DE + G
Sbjct: 361 HTDEEDDG 368
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 87/189 (46%), Gaps = 26/189 (13%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLGLG E + ++E P+ V V GS ++ + +
Sbjct: 9 AWGSGEDGQLGLGTDEEKELASVVEALE---PFNVRSVVGGSRNSLAICD--------DG 57
Query: 218 MCWTFGLGENGQLGH-GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T+G + G LGH T++ P VK L V +V G +H V G ++WG
Sbjct: 58 KLFTWGWNQRGTLGHPPETKTESTPSLVKSLAS-VKIVQAAIGGWHCLAVDDQGRAYAWG 116
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP----VQVACGAAHTVLVTDD 332
+ G C +++E G + ++ PK P QVA G H+V++T +
Sbjct: 117 GNE-YGQC-GEEPSKDETGRPVRRDIVI------PKRCAPQLTVRQVAAGGTHSVVLTRE 168
Query: 333 GYKLWSWGR 341
GY +W+WG+
Sbjct: 169 GY-VWTWGQ 176
Score = 45.8 bits (107), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 59/151 (39%), Gaps = 22/151 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + + AGG S A+ N G ++ WG G S P V G +++
Sbjct: 248 LTLVDIAAGGWHSTALTNEGEVYGWGRGEHGRLGF-GDNDKSSKMLPQKVNLLAGEDIIQ 306
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP--------KIIET 183
V+CG H VAL G +S+G ++G+LG G + + +P +
Sbjct: 307 VSCGGTHSVALTRDGR--------IFSFGRGDHGRLGYGRKVTTGQPLELPIDIPPLEGR 358
Query: 184 FNQ-----DSPWAVYEVTCGSFHTALLTHRK 209
FN D W V CG HT + K
Sbjct: 359 FNHTDEEDDGKWIAKHVACGGRHTLAIVEWK 389
>gi|395541966|ref|XP_003772907.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3, partial
[Sarcophilus harrisii]
Length = 638
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 134/295 (45%), Gaps = 46/295 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
I V G SLA+ + G L+ WG + L ++TE ++ P + + ++
Sbjct: 87 IVHVACGESHSLALSDQGQLFSWGAGSDGQLGHTTTEDSVAI-----PRLIKKLNQQMIL 141
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSP 189
+V+CG+ H +AL + G+ + +WG N +GQLGLG S+ P+ +++ + P
Sbjct: 142 QVSCGNWHCMALAADGQFF--------TWGQNRHGQLGLGKEFPSQASPQRVKSL-EGIP 192
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
A +V G H+ L+ L + +G GQLG P VK L +
Sbjct: 193 LA--QVAAGGAHSFALS--------LSGAVFGWGRNNAGQLGLSDETDRQSPCHVK-LLR 241
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISGN 306
+V + CG HT+V++ +G V+++G L + D ++P + + G+
Sbjct: 242 TQKVVYISCGEEHTAVLTKSGGVFTFGAGS------FGQLGHDSMNDEVNPRRVLELMGS 295
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 296 --------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 342
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 111/241 (46%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
++ +VACG H + L+ GE Y + G+N GQLG +RE +I +Q
Sbjct: 36 SIKEVACGGNHSIFLLEDGEVY--------TCGSNTKGQLG-HEREGNKPEQIGALADQH 86
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ + +++G G +GQLGH TT+ S +P +K+
Sbjct: 87 ----IVHVACGESHSLALSD--------QGQLFSWGAGSDGQLGHTTTEDSVAIPRLIKK 134
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAISP 300
L Q + L V CG +H +++ G ++WG + GLG AS R ++ + I P
Sbjct: 135 LNQQMIL-QVSCGNWHCMALAADGQFFTWGQNRHGQLGLGKEFPSQASPQRVKSLEGI-P 192
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WGR +G LG D +P
Sbjct: 193 L---------------AQVAAGGAHSFALSLSG-AVFGWGRNNAGQLGLSDETDRQSPCH 236
Query: 361 V 361
V
Sbjct: 237 V 237
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 77/176 (43%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS-LVSSFTPSPVWDFHGHTVV 130
I + V AGG S A+ +GA++ WG +++ + G S +P V VV
Sbjct: 191 IPLAQVAAGGAHSFALSLSGAVFGWGR----NNAGQLGLSDETDRQSPCHVKLLRTQKVV 246
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSP 189
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 YISCGEEHTAVLTKSGGVF--------TFGAGSFGQLGHDSMNDEVNPRRVLELMGSE-- 296
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 297 --VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 343
>gi|430813410|emb|CCJ29231.1| unnamed protein product [Pneumocystis jirovecii]
Length = 506
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/291 (26%), Positives = 125/291 (42%), Gaps = 35/291 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K+ + G +S+AI + G ++ WG+ D GFS PV + +V
Sbjct: 201 VKVVKMACGDSISVAITDKGQVYAWGSFRCSDGIL--GFSPQIKIARQPVHLKELNNIVS 258
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFNQDS 188
V CG++HV+AL + G +SWG N Q LG R +RL + F
Sbjct: 259 VVCGTDHVLALTAYGS--------VFSWG--NGQQFQLGHRVVERTRLNALVPREFGLKK 308
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG---HGTTQSALV--PEQ 243
+ + GS+H+ ++H R +++GL + GQ G G A+V P
Sbjct: 309 ---IKAIGAGSYHSFAISHDGR--------VFSWGLNQFGQCGIESSGGEDGAVVSSPTH 357
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPI 301
V+ L Y +V + G H++ ++ G++ WG LG+ P L + DA +
Sbjct: 358 VQSLDPY-NIVCITGGEHHSAALTQEGELLVWGRLDANQLGI-PRTYLPQYTIYDASNRP 415
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P Q+ CG H + +T D +WSWG G S +G G +
Sbjct: 416 RFVPIPTKVPGIPIISQIYCGTHHNLAITKDDGSVWSWGFGESYQVGQGPS 466
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 120/305 (39%), Gaps = 58/305 (19%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---------------NCPLPDSSTEGGFSLVSSF 116
I I V GGM + AID G ++ WG N DS E + S
Sbjct: 131 IGIVDVAVGGMHTAAIDYEGNVYTWGVNDQGALGRDTTWDVNRADLDSDDEQMLNPKDS- 189
Query: 117 TPSPVWDF-HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P V G VVK+ACG VA+ G+ Y C ++G LG +
Sbjct: 190 VPGKVEGMPDGVKVVKMACGDSISVAITDKGQVYAWGSFRC------SDGILGFSPQIKI 243
Query: 176 LR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R P ++ N + V CG+ H LT +++G G+ QLGH
Sbjct: 244 ARQPVHLKELNN-----IVSVVCGTDHVLALT--------AYGSVFSWGNGQQFQLGHRV 290
Query: 235 TQ----SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
+ +ALVP + + ++ G +H+ +S G V+SWG+ + G C S
Sbjct: 291 VERTRLNALVPREFG----LKKIKAIGAGSYHSFAISHDGRVFSWGLNQ-FGQCGIESSG 345
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVAC---GAAHTVLVTDDGYKLWSWGRGRSGVL 347
+ SP + + DP + C G H+ +T +G +L WGR + L
Sbjct: 346 GEDGAVVSSPTHV--------QSLDPYNIVCITGGEHHSAALTQEG-ELLVWGRLDANQL 396
Query: 348 GTGKT 352
G +T
Sbjct: 397 GIPRT 401
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 48/233 (20%)
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES-RL--RPKIIETFNQDSPWAVYEVT 196
V ++ K + L Y +G + +LGLG + R+ RP++ D+ + +V
Sbjct: 79 VPFINEIPVLKQQKLCVYVFGTGSMSELGLGPEPTGRVVKRPRLNPLLPYDT-IGIVDVA 137
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-----------------QSAL 239
G HTA + + E +T+G+ + G LG TT
Sbjct: 138 VGGMHTAAIDY--------EGNVYTWGVNDQGALGRDTTWDVNRADLDSDDEQMLNPKDS 189
Query: 240 VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAG 295
VP +V+ +P V +V + CG + ++ G V++WG + LG P + R
Sbjct: 190 VPGKVEGMPDGVKVVKMACGDSISVAITDKGQVYAWGSFRCSDGILGFSPQIKIARQ--- 246
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P+ H + + V V CG H + +T G ++SWG G+ LG
Sbjct: 247 ----PV-------HLKELNNIVSVVCGTDHVLALTAYG-SVFSWGNGQQFQLG 287
>gi|345494372|ref|XP_001602409.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like [Nasonia
vitripennis]
Length = 1083
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 132/298 (44%), Gaps = 44/298 (14%)
Query: 70 APIKICSVKAGGMMSLA-IDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
AP ++C + L I N ++ WG+ + GG + P + DF T
Sbjct: 4 APKRLCIKADTFHLPLKLIPNDNNMYCWGSTVYGELGL-GGIEDENILMPREL-DFQKAT 61
Query: 129 VV-KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V ++ACG H V + GE +S G N++GQLG RL ++I +
Sbjct: 62 AVEQIACGETHTVLITKDGEV--------FSCGNNDSGQLGHEKPTKRL--QMIPGLD-- 109
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQVKE 246
+ + CG+ H+ + N+ + CW G +GQLG GT + A P VK
Sbjct: 110 -AFIFKQAACGASHSVAV------NNWGQLFCW--GSNADGQLGLGTPLTIAHTPRMVKA 160
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASL-TRNEAGDAISPILI 303
L + +V + CG HT +++ G++++WG LGL + + TR P LI
Sbjct: 161 LGTSI-VVQIACGKKHTLALTNNGELYAWGSNSDGQLGLGQDVKIETR--------PKLI 211
Query: 304 SGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+G F +ACG H+++V+ G ++ WGR G LG D + P ++
Sbjct: 212 TGLATIPIAF-----IACGGYHSIVVSKSG-AVFGWGRNTFGQLGMNDISDKYVPCLL 263
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/292 (28%), Positives = 130/292 (44%), Gaps = 46/292 (15%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHV 139
G S+A++N G L+ WG+ D G L + TP V VV++ACG +H
Sbjct: 119 GASHSVAVNNWGQLFCWGSNA--DGQLGLGTPLTIAHTPRMVKALGTSIVVQIACGKKHT 176
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL + GE Y+WG+N++GQLGLG D + RPK+I + + + CG
Sbjct: 177 LALTNNGE--------LYAWGSNSDGQLGLGQDVKIETRPKLITGL---ATIPIAFIACG 225
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQYVYLVSV 256
+H+ +++ FG G N GQLG VP +K L + + V
Sbjct: 226 GYHSIVVSKSGA----------VFGWGRNTFGQLGMNDISDKYVPCLLKTL-RNAKVKYV 274
Query: 257 DCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
CG + ++ G V++ G + G G N L R + + + ++
Sbjct: 275 ACGEEFSVFLTMDGGVFTCGAGMYGQLGHGANSNEILPR-QIIELMGSVV---------- 323
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
Q++CG HT+ + K+++WG G SG LG+ P +VL P
Sbjct: 324 ----TQISCGKRHTLALVPSRGKVYAWGLGGSGQLGSQTARSVATPQMVLGP 371
Score = 45.8 bits (107), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 18/139 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHT 128
A I I + GG S+ + +GA++ WG ++ + G + +S + P +
Sbjct: 215 ATIPIAFIACGGYHSIVVSKSGAVFGWGR----NTFGQLGMNDISDKYVPCLLKTLRNAK 270
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQD 187
V VACG E V L G ++ GA GQLG G + + P+ IIE
Sbjct: 271 VKYVACGEEFSVFLTMDGGV--------FTCGAGMYGQLGHGANSNEILPRQIIELMGS- 321
Query: 188 SPWAVYEVTCGSFHTALLT 206
V +++CG HT L
Sbjct: 322 ---VVTQISCGKRHTLALV 337
>gi|168046566|ref|XP_001775744.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672896|gb|EDQ59427.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 441
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/268 (30%), Positives = 122/268 (45%), Gaps = 50/268 (18%)
Query: 102 PDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
P++S E F+ P G + VA G H +AL + + + WG
Sbjct: 169 PEASEENAFAPPCLVKLDP-----GIRISSVAAGGRHTLALSDNTNHMETDVGQVWGWGY 223
Query: 162 NNNGQLGLGDRESRLR----PKIIETFNQ-DSPWA----------VYEVTCGSFHTALLT 206
GQLGLG S +R P+ I FN D+ A + + CG H+A++T
Sbjct: 224 GGEGQLGLG---SCIRIVSFPQHIPCFNMTDTGNARSGVPIPGSYIKAIACGGRHSAVIT 280
Query: 207 HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
TFG G GQ+G G+T+ L P V L Q + +V + GL+HT +
Sbjct: 281 D--------TGAVLTFGWGLYGQIGQGSTEDELSPSHVSTL-QGLSIVGIAAGLWHTLCI 331
Query: 267 SSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD--PVQVACG 322
++ GDV+S+G + LG+ N + +SP LI P D V VACG
Sbjct: 332 TNTGDVYSFGGNQFGQLGVGGNNA--------ELSPRLID-----APLLGDELSVAVACG 378
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A H+V++T G K+++WG + G LG G
Sbjct: 379 ARHSVVLTGSG-KIFAWGWNKYGQLGLG 405
Score = 58.2 bits (139), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 30/211 (14%)
Query: 59 SLEDDSKTNHKAPIKICSVKA---GGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSL 112
++ D PI +KA GG S I + GA+ +G + STE
Sbjct: 248 NMTDTGNARSGVPIPGSYIKAIACGGRHSAVITDTGAVLTFGWGLYGQIGQGSTE----- 302
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+PS V G ++V +A G H + + + G+ Y S+G N GQLG+G
Sbjct: 303 -DELSPSHVSTLQGLSIVGIAAGLWHTLCITNTGDVY--------SFGGNQFGQLGVGGN 353
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ L P++I+ +V V CG+ H+ +LT + + +G + GQLG
Sbjct: 354 NAELSPRLIDAPLLGDELSV-AVACGARHSVVLTGSGK--------IFAWGWNKYGQLGL 404
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
G + +P QV + S+ CG +HT
Sbjct: 405 GDCNNRDLPMQVT-MNDGGRAASIACGWWHT 434
>gi|115378347|ref|ZP_01465512.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|310825395|ref|YP_003957753.1| bnr repeat domain-containing protein [Stigmatella aurantiaca
DW4/3-1]
gi|115364660|gb|EAU63730.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
gi|309398467|gb|ADO75926.1| BNR repeat domain protein [Stigmatella aurantiaca DW4/3-1]
Length = 382
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/285 (29%), Positives = 114/285 (40%), Gaps = 43/285 (15%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
+ AG SLA+ G++W WG S +L F P PV +V VA G
Sbjct: 37 LSAGDSHSLAVHADGSVWAWGAS---ASGLREEGALSRRFAPVPVPGL--SDIVSVAAGG 91
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H +A+ + D ++WG N GQLG G +R P + + V V
Sbjct: 92 AHSLAVRA--------DGTLWTWGGNPYGQLGDGTTTARALPVQVAGLS-----GVRAVA 138
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSV 256
G H+ L + W +GL + GQLG GTT L P + +P + SV
Sbjct: 139 TGLGHSLAL--------RADGTVWAWGLNQFGQLGDGTTSQWLTP---RPIPGLSGVRSV 187
Query: 257 DCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
G FH+ VV VW+WG G + S +R AI P ++
Sbjct: 188 AAGGFHSLVVRDDDTVWAWGSND-YGELGDGSTSRRAVPRAI------------PGLRNV 234
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VA G H++ V DG L +WG G LG G + P V
Sbjct: 235 ASVAGGCYHSLAVHADG-TLSAWGLNSYGQLGDGTFSNRATPRPV 278
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/228 (29%), Positives = 99/228 (43%), Gaps = 41/228 (17%)
Query: 61 EDDSKTNHKAPIK------ICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFS 111
E+ + + AP+ I SV AGG SLA+ G LW WG P L D +T
Sbjct: 65 EEGALSRRFAPVPVPGLSDIVSVAAGGAHSLAVRADGTLWTWGGNPYGQLGDGTT----- 119
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
+ P V G V VA G H +AL + D ++WG N GQLG G
Sbjct: 120 -TARALPVQVAGLSG--VRAVATGLGHSLALRA--------DGTVWAWGLNQFGQLGDGT 168
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
L P+ I + V V G FH+ ++ R +D + W +G + G+LG
Sbjct: 169 TSQWLTPRPIPGLS-----GVRSVAAGGFHSLVV----RDDDTV----WAWGSNDYGELG 215
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
G+T VP + +P + SV G +H+ V + G + +WG+
Sbjct: 216 DGSTSRRAVP---RAIPGLRNVASVAGGCYHSLAVHADGTLSAWGLNS 260
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 92/232 (39%), Gaps = 38/232 (16%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V ++ G H +A+ + G ++WGA+ +G G R P + +
Sbjct: 35 VPLSAGDSHSLAVHADGS--------VWAWGASASGLREEGALSRRFAPVPVPGLSD--- 83
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
+ V G H+ + + WT+G GQLG GTT + +P QV L
Sbjct: 84 --IVSVAAGGAHSLAV--------RADGTLWTWGGNPYGQLGDGTTTARALPVQVAGLSG 133
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ +V GL H+ + + G VW+WG+ + L ++P I
Sbjct: 134 ---VRAVATGLGHSLALRADGTVWAWGLNQ------FGQLGDGTTSQWLTPRPI------ 178
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P VA G H+++V DD +W+WG G LG G T P +
Sbjct: 179 -PGLSGVRSVAAGGFHSLVVRDD-DTVWAWGSNDYGELGDGSTSRRAVPRAI 228
Score = 55.5 bits (132), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 84/204 (41%), Gaps = 30/204 (14%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV AGG SL + + +W WG+ D G S P + V VA
Sbjct: 184 VRSVAAGGFHSLVVRDDDTVWAWGSN---DYGELGDGSTSRRAVPRAIPGLR--NVASVA 238
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H +A+ + D +WG N+ GQLG G +R P+ + + V
Sbjct: 239 GGCYHSLAVHA--------DGTLSAWGLNSYGQLGDGTFSNRATPRPVPGLS-----GVR 285
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVY 252
V FH+ L E W +GL G+ G GT ++ + P V P
Sbjct: 286 CVATSFFHSLAL--------RAEGTVWAWGLNGYGEQGDGTASRQSPTPRPV---PGLSG 334
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWG 276
++SV G FH+ V++ G V +WG
Sbjct: 335 VLSVATGTFHSLAVNTNGTVSAWG 358
Score = 40.4 bits (93), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 62/166 (37%), Gaps = 34/166 (20%)
Query: 23 CYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICS------ 76
CY SL DG L G NS L D + +N P +
Sbjct: 241 CYHSLAVHADGTLSAWGLNSY--------------GQLGDGTFSNRATPRPVPGLSGVRC 286
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHGHTVVKVACG 135
V SLA+ G +W WG L +G G + S TP PV G V+ VA G
Sbjct: 287 VATSFFHSLALRAEGTVWAWG---LNGYGEQGDGTASRQSPTPRPVPGLSG--VLSVATG 341
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKII 181
+ H +A+ + G +WG N GQLG G R P +
Sbjct: 342 TFHSLAVNTNG--------TVSAWGHNGQGQLGDGTATHRSTPVTV 379
>gi|432863735|ref|XP_004070156.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like [Oryzias
latipes]
Length = 1080
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 97/240 (40%), Gaps = 64/240 (26%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK-GEDL-------------------- 154
FTP + G TV +VACGS+H V L G+ Y G++
Sbjct: 111 FTPRSLEALSGITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCV 170
Query: 155 -------------------------VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
+ WG N+ GQLGLGD R P ++ N
Sbjct: 171 RSLSSMPVVQVSAGGDHSFALSVSGSVFGWGRNDCGQLGLGDTTDRETPTLVHYLNMKK- 229
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V+ CG HTA+LT ++ +TFG G GQLGH + ++AL P V EL
Sbjct: 230 -TVF-AACGKDHTAVLT--------MDGTVFTFGSGHYGQLGHNSFRNALCPRLVAEL-W 278
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS-PILISGNGP 308
+ + CG +HT V++ V+S+G + L P R E + P+ + GP
Sbjct: 279 GAKVTKIACGRYHTLVLTDHMKVYSFGCNEHGQLGP-----REETHPCVPLPVQLPREGP 333
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/180 (26%), Positives = 77/180 (42%), Gaps = 27/180 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + V AGG S A+ +G+++ WG D G TP+ V + V
Sbjct: 176 MPVVQVSAGGDHSFALSVSGSVFGWGR---NDCGQLGLGDTTDRETPTLVHYLNMKKTVF 232
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
ACG +H L G +++G+ + GQLG + L P+++ W
Sbjct: 233 AACGKDHTAVLTMDG--------TVFTFGSGHYGQLGHNSFRNALCPRLVAEL-----WG 279
Query: 192 --VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CG +HT +LT + ++FG E+GQLG VP V +LP+
Sbjct: 280 AKVTKIACGRYHTLVLTDHMK--------VYSFGCNEHGQLGPREETHPCVPLPV-QLPR 330
Score = 46.2 bits (108), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 54/115 (46%), Gaps = 18/115 (15%)
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + V CG HT V+S G V++WG + GLG +S++ + ++S + +
Sbjct: 122 ITVTQVACGSQHTVVLSKDGQVYTWGQNSRGQLGLGKEGCSSISSPQCVRSLSSMPV--- 178
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VQV+ G H+ ++ G ++ WGR G LG G T D P +V
Sbjct: 179 ----------VQVSAGGDHSFALSVSG-SVFGWGRNDCGQLGLGDTTDRETPTLV 222
>gi|242059927|ref|XP_002459109.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
gi|241931084|gb|EES04229.1| hypothetical protein SORBIDRAFT_03g046020 [Sorghum bicolor]
Length = 892
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 133/292 (45%), Gaps = 34/292 (11%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVVKVACG 135
V G + A+ +G L+ WG+ G + VS + P V G V ++CG
Sbjct: 167 VACGEYHTCAVTLSGDLYTWGDGTF-KFGLLGHGNDVSHWVPKHVNGPLEGIHVSSISCG 225
Query: 136 SEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEV 195
H + SAG+ +++G + G LG GDRES P+ +E+
Sbjct: 226 PWHTALVTSAGQ--------LFTFGDGSFGVLGHGDRESISVPREVESLKG---LRTVRA 274
Query: 196 TCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
CG +HTA ++ ++ +T+G G+ G+LGHG ++ LVP V L +
Sbjct: 275 ACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCVAALVEPN 334
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+ V CG T ++++G V++ G + LG N D + P+ + G
Sbjct: 335 F-CQVACGHCLTVALTTSGHVYTMGSAVYGQLG---------NTQADGMLPVRVEGK--L 382
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + +++CGA H ++T ++++WG+G +G LG G T D P +V
Sbjct: 383 HKNFVE--EISCGAYHVAVLTSR-TEVYTWGKGANGRLGHGDTDDKNTPTLV 431
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 104/246 (42%), Gaps = 43/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++CG H + GE Y SWG + G+LG G +PK+I+ S
Sbjct: 112 VQNISCGGRHAALVTKQGEIY--------SWGEESGGRLGHGVDCDVSQPKLIDAL---S 160
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG--ENGQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G + G LGHG S VP+ V
Sbjct: 161 HMNIELVACGEYHTCAVT--------LSGDLYTWGDGTFKFGLLGHGNDVSHWVPKHVNG 212
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ +++ S+ CG +HT++V+SAG ++++G + G+ + + +
Sbjct: 213 PLEGIHVSSISCGPWHTALVTSAGQLFTFG-DGSFGVLGHGDRESISVPREVESL----- 266
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDF 355
K V+ ACG HT V + K+++WG G G LG G
Sbjct: 267 -----KGLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAK 321
Query: 356 FAPAIV 361
P V
Sbjct: 322 LVPTCV 327
Score = 68.9 bits (167), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 105/242 (43%), Gaps = 37/242 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV------SSFTPSPVWDFH 125
I + S+ G + + +AG L+ +G +G F ++ S P V
Sbjct: 217 IHVSSISCGPWHTALVTSAGQLFTFG---------DGSFGVLGHGDRESISVPREVESLK 267
Query: 126 GHTVVKVACGSEHVVALVS--AGETYKGEDLV--CYSWGANNNGQLGLGDRESRLRPKII 181
G V+ ACG H A+V AG + ++WG + G+LG GD+E++L P +
Sbjct: 268 GLRTVRAACGVWHTAAVVEVMAGNSSSSNCSSGKIFTWGDGDKGRLGHGDKEAKLVPTCV 327
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
+ + +V CG T LT +T G GQLG+ T ++P
Sbjct: 328 AALVEPN---FCQVACGHCLTVALT--------TSGHVYTMGSAVYGQLGN-TQADGMLP 375
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
+V+ ++ + CG +H +V++S +V++WG KG N L + D +P
Sbjct: 376 VRVEGKLHKNFVEEISCGAYHVAVLTSRTEVYTWG--KGA----NGRLGHGDTDDKNTPT 429
Query: 302 LI 303
L+
Sbjct: 430 LV 431
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGD 296
LVP+ + E + + ++ CG H ++V+ G+++SWG E G LG + +++ + D
Sbjct: 99 LVPKPL-EFAVRLDVQNISCGGRHAALVTKQGEIYSWGEESGGRLGHGVDCDVSQPKLID 157
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGVLGTGKTID 354
A+S + I VACG HT VT G L++WG G + G+LG G +
Sbjct: 158 ALSHMNIE-------------LVACGEYHTCAVTLSG-DLYTWGDGTFKFGLLGHGNDVS 203
Query: 355 FFAPAIVLWP 364
+ P V P
Sbjct: 204 HWVPKHVNGP 213
>gi|410906431|ref|XP_003966695.1| PREDICTED: X-linked retinitis pigmentosa GTPase regulator-like
[Takifugu rubripes]
Length = 726
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 83/261 (31%), Positives = 124/261 (47%), Gaps = 49/261 (18%)
Query: 26 SLNCCMDGQLGFSGSNS-----LVPCVIEQ-FLTIGAPDSLEDDSKTNHKAPIKICSVKA 79
+L C G++ SG NS L C F I A DSL P+K+ + A
Sbjct: 100 TLICTAQGKVFSSGGNSEGQLGLGDCEERTTFQRIHAFDSL---------GPVKM--LAA 148
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-SFTPSPVWDFHGHTVVKVACGSEH 138
G S A+ +G L+MWG+ +TEG L S PSP G + V+CG H
Sbjct: 149 GSNTSAALTESGKLFMWGD------NTEGQIGLAKESHAPSPQEVDVGGPISWVSCGYYH 202
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE-SRLR-PKIIETFNQDSPWAVYEVT 196
A V+A D Y++G ++G+LGL + R R P+++++ + V +V
Sbjct: 203 S-AFVTA-------DGALYTFGECDSGKLGLTTEQLPRHRVPQMVKSIKE----PVTQVA 250
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVS 255
CG HT LT E +TFGLG+ GQLGHGT + +P V+ + +
Sbjct: 251 CGGGHTVALT---------EERLFTFGLGQFGQLGHGTFIFESRLPRPVEHF-KKGRVCQ 300
Query: 256 VDCGLFHTSVVSSAGDVWSWG 276
V CG HT+V++ G ++++G
Sbjct: 301 VACGENHTAVITDGGLLYTFG 321
Score = 75.9 bits (185), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 127/289 (43%), Gaps = 51/289 (17%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT---PSPVWDFHGH 127
P+KI G + I G L+M+G S+ G L S T P+ V
Sbjct: 38 PLKIA---CGDEHTALITKNGRLFMFG------SNNWGQLGLGSKRTVNKPTCVKALKTE 88
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
V+ VACG H + + G+ + S G N+ GQLGLGD E R + I F D
Sbjct: 89 KVLLVACGRNHTLICTAQGKVF--------SSGGNSEGQLGLGDCEERTTFQRIHAF--D 138
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
S V + GS +A LT + + +G GQ+G A P++V
Sbjct: 139 SLGPVKMLAAGSNTSAALTESGK--------LFMWGDNTEGQIGLAKESHAPSPQEVDVG 190
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISG 305
+ V CG +H++ V++ G ++++G LGL L R+ + I
Sbjct: 191 GPISW---VSCGYYHSAFVTADGALYTFGECDSGKLGLT-TEQLPRHRVPQMVKSI---- 242
Query: 306 NGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
++PV QVACG HTV +T++ +L+++G G+ G LG G I
Sbjct: 243 --------KEPVTQVACGGGHTVALTEE--RLFTFGLGQFGQLGHGTFI 281
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 72/161 (44%), Gaps = 29/161 (18%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFS--LVSSFTPSPVWDFHGHTVVKVAC 134
V G S + GAL+ +G C DS G + L P V V +VAC
Sbjct: 196 VSCGYYHSAFVTADGALYTFGEC---DSGKLGLTTEQLPRHRVPQMVKSIK-EPVTQVAC 251
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPWAV 192
G H VAL E L +++G GQLG G ESRL P+ +E F + V
Sbjct: 252 GGGHTVALTE-------ERL--FTFGLGQFGQLGHGTFIFESRL-PRPVEHFKKGR---V 298
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+V CG HTA++T + +TFG G +G+LG G
Sbjct: 299 CQVACGENHTAVITDG--------GLLYTFGDGRHGKLGLG 331
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 47/107 (43%), Gaps = 16/107 (14%)
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
G + S P PV F V +VACG H + G + Y++G +G+LG
Sbjct: 278 GTFIFESRLPRPVEHFKKGRVCQVACGENHTAVITDGG--------LLYTFGDGRHGKLG 329
Query: 169 LGDRE--SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPND 213
LG+ ++ +P + F + + V TCG H +L RP D
Sbjct: 330 LGEENFTNQFKPTVCSRFLK---YGVQAATCGGCHMVVLA---RPRD 370
>gi|348683969|gb|EGZ23784.1| hypothetical protein PHYSODRAFT_311023 [Phytophthora sojae]
Length = 625
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 77/162 (47%), Gaps = 15/162 (9%)
Query: 116 FTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
+P+ + G VV V+ G EH V + GET+ + YSWG NG+LG D +R
Sbjct: 339 LSPARITSLDGLNVVHVSAGDEHSVVMT--GETFFNRQV--YSWGLGKNGRLGHNDELTR 394
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC-WTFGLGENGQLGHGT 234
L+P + F V + G H + +M +C W++G G GQLGH
Sbjct: 395 LKPTRVNCFRGRK---VITLVAGGAHNLATS------EMPRGVCVWSWGAGSYGQLGHRD 445
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
T L+P V E+ +Y + +D G H+ +S + +W WG
Sbjct: 446 TWDTLIPRSVDEI-RYESIRYIDAGQRHSLAISESKQLWLWG 486
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/210 (32%), Positives = 95/210 (45%), Gaps = 29/210 (13%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
SWG + G LG GD ES P++I+ FN V V+ G H +LT L+
Sbjct: 269 SWGRGDYGVLGHGDTESSATPRVIKIFNS---MRVTCVSAGLHHVLVLTE-------LDG 318
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG----DVW 273
+ + FG G NG+LG G T L P ++ L + +V V G H+ V++ V+
Sbjct: 319 V-YAFGDGSNGKLGLGDTNPRLSPARITSL-DGLNVVHVSAGDEHSVVMTGETFFNRQVY 376
Query: 274 SWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD-- 331
SWG+ K L N LTR + P + N G K + + G AH + ++
Sbjct: 377 SWGLGKNGRLGHNDELTR------LKPTRV--NCFRGRKV---ITLVAGGAHNLATSEMP 425
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G +WSWG G G LG T D P V
Sbjct: 426 RGVCVWSWGAGSYGQLGHRDTWDTLIPRSV 455
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 110/267 (41%), Gaps = 35/267 (13%)
Query: 81 GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
M + A++N L WG D G SS TP + F+ V V+ G HV+
Sbjct: 258 AMNAAAVNN---LVSWGR---GDYGVLGHGDTESSATPRVIKIFNSMRVTCVSAGLHHVL 311
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
L Y ++G +NG+LGLGD RL P I + + V V+ G
Sbjct: 312 VLTELDGVY--------AFGDGSNGKLGLGDTNPRLSPARITSLDG---LNVVHVSAGDE 360
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL--PQYVYLVSVDC 258
H+ ++T +++GLG+NG+LGH + L P +V + + LV+
Sbjct: 361 HSVVMT----GETFFNRQVYSWGLGKNGRLGHNDELTRLKPTRVNCFRGRKVITLVAGGA 416
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
TS + VWSWG L + D + P + +++
Sbjct: 417 HNLATSEMPRGVCVWSWGAGS------YGQLGHRDTWDTLIPRSVD-----EIRYESIRY 465
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSG 345
+ G H++ +++ +LW WG+G G
Sbjct: 466 IDAGQRHSLAISES-KQLWLWGQGIHG 491
>gi|356573964|ref|XP_003555124.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
max]
Length = 395
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 140/346 (40%), Gaps = 73/346 (21%)
Query: 71 PIKICSVKAGGMMSLAIDNAGAL--WMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
P +I SV AG SLAI + G L W W E + TPS V
Sbjct: 37 PHRIRSVVAGSRNSLAIADDGKLFTWGWNQRATLGHPAETKSENKTENTPSQVKALSSVK 96
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG----LGDRESRLRPKIIETF 184
+V+ A G H +A+ G Y+WG N GQ G D R + IE
Sbjct: 97 IVQAAIGGWHCLAVDDQGR--------AYAWGGNEYGQCGEEPERKDGTGRPLRRDIEIP 148
Query: 185 NQDSP-WAVYEVTCGSFHTALLTHRKR---------PNDM-----------LESM----- 218
+ +P V +V G H+ +LT P D+ LE++
Sbjct: 149 QRCAPKLVVRQVAAGGTHSVVLTREGHVWTWGQPWPPGDIKQISVPVRVQGLENVRLIAV 208
Query: 219 -------------CWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
W +G E GQLG G TQ P +V+ L + LV + G +H++
Sbjct: 209 GAFHNLALQEDGTLWAWGNNEYGQLGTGDTQPRSQPIRVQGLSD-LTLVDIAAGGWHSTA 267
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI---LISGNGPHGPKFQDPVQVACG 322
++ G+V+ WG G ++ + P L++G +D VQV+CG
Sbjct: 268 LTDEGEVYGWGR----GEHGRLGFGDSDKSSKMVPQKVQLLAG--------EDIVQVSCG 315
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP---AIVLWPP 365
H+V +T DG+ ++S+GRG G LG G+ + P I L PP
Sbjct: 316 GTHSVALTRDGH-MFSFGRGDHGRLGYGRKVTTGQPMEVPIDLPPP 360
Score = 68.6 bits (166), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/308 (26%), Positives = 126/308 (40%), Gaps = 53/308 (17%)
Query: 39 GSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKIC--SVKAGGMMSLAIDNAGALWMW 96
G N C E G L D + + K+ V AGG S+ + G +W W
Sbjct: 120 GGNEYGQCGEEPERKDGTGRPLRRDIEIPQRCAPKLVVRQVAAGGTHSVVLTREGHVWTW 179
Query: 97 GNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVC 156
G P P G +S PV V +A G+ H +AL ED
Sbjct: 180 GQ-PWP----PGDIKQISV----PVRVQGLENVRLIAVGAFHNLALQ--------EDGTL 222
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WG N GQLG GD + R +P ++ S + ++ G +H+ LT E
Sbjct: 223 WAWGNNEYGQLGTGDTQPRSQPIRVQGL---SDLTLVDIAAGGWHSTALTD--------E 271
Query: 217 SMCWTFGLGENGQLGHGTT--QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ +G GE+G+LG G + S +VP++V+ L +V V CG H+ ++ G ++S
Sbjct: 272 GEVYGWGRGEHGRLGFGDSDKSSKMVPQKVQLLAGE-DIVQVSCGGTHSVALTRDGHMFS 330
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-----------VACGA 323
+G L +T + + PI + P QDP VACG
Sbjct: 331 FGRGDHGRLGYGRKVTTGQPMEV--PIDL-------PPPQDPSGTATEGHWIAKLVACGG 381
Query: 324 AHTVLVTD 331
HT+ + +
Sbjct: 382 RHTLAIVE 389
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 82/191 (42%), Gaps = 25/191 (13%)
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG+ +GQLG+G E + +++ P + V GS ++ + +
Sbjct: 9 AWGSGEDGQLGIGSNEEKEWVCLVKALQ---PHRIRSVVAGSRNSLAIAD--------DG 57
Query: 218 MCWTFGLGENGQLGH-----GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDV 272
+T+G + LGH ++ P QVK L V +V G +H V G
Sbjct: 58 KLFTWGWNQRATLGHPAETKSENKTENTPSQVKAL-SSVKIVQAAIGGWHCLAVDDQGRA 116
Query: 273 WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH--GPKFQDPVQVACGAAHTVLVT 330
++WG + G C ++ G P+ P PK QVA G H+V++T
Sbjct: 117 YAWGGNE-YGQCGEEPERKDGTG---RPLRRDIEIPQRCAPKLV-VRQVAAGGTHSVVLT 171
Query: 331 DDGYKLWSWGR 341
+G+ +W+WG+
Sbjct: 172 REGH-VWTWGQ 181
>gi|350418736|ref|XP_003491950.1| PREDICTED: hypothetical protein LOC100748540 [Bombus impatiens]
Length = 791
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/238 (29%), Positives = 111/238 (46%), Gaps = 41/238 (17%)
Query: 117 TPSPVWD--FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
TP V+D G +V++A GS H +AL S G ++WG+N GQLGL D
Sbjct: 133 TPVLVYDSGLSGSKIVQIAAGSHHSLALTSDG--------GVFAWGSNLEGQLGLPDVSG 184
Query: 175 RL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ +P + P V +++ G +H+ LT + + G E+G+LG
Sbjct: 185 LVNKPTKVHI-----PEPVKQISAGYYHSTFLTES--------GLVYVCGESESGKLGID 231
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTR 291
+ S V + +LP V V CG HT +++ G+++ G LGL
Sbjct: 232 ASFSTQVAPKQMQLPSPA--VHVACGGHHTVILAENGNLYCTGSNSSGQLGL-------- 281
Query: 292 NEAGDAISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
G +S + I P G + + +++CG +HT +VT+ G KL++ G GR G LG
Sbjct: 282 ---GTNLSELHIPKLLPRGMLRNETITRISCGESHTAVVTESG-KLYTCGDGRHGKLG 335
Score = 62.4 bits (150), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 101/248 (40%), Gaps = 51/248 (20%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ + CG EH + G + +G+N+ GQLGLG + +P ++
Sbjct: 38 VLSITCGDEHSAVICQTGR--------LFVFGSNDWGQLGLGHKNHISKPSCVKAL---K 86
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P V V CG HT + T ++ + G + GQLG G + + + V P
Sbjct: 87 PERVTHVACGRAHTLICTGSQK--------IFACGSDQEGQLGRGI---SAIGDSVN-TP 134
Query: 249 QYVY--------LVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAGDAI 298
VY +V + G H+ ++S G V++WG +E LGL + L
Sbjct: 135 VLVYDSGLSGSKIVQIAAGSHHSLALTSDGGVFAWGSNLEGQLGLPDVSGLV-------- 186
Query: 299 SPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF-F 356
N P +PV Q++ G H+ +T+ G ++ G SG LG +
Sbjct: 187 -------NKPTKVHIPEPVKQISAGYYHSTFLTESGL-VYVCGESESGKLGIDASFSTQV 238
Query: 357 APAIVLWP 364
AP + P
Sbjct: 239 APKQMQLP 246
Score = 43.5 bits (101), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 94/243 (38%), Gaps = 55/243 (22%)
Query: 6 YYYHYYLCFTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSK 65
YY+ +L + ++C S G+LG S F T AP ++
Sbjct: 205 YYHSTFLTESGLV--YVCGES----ESGKLGIDAS----------FSTQVAPKQMQ---- 244
Query: 66 TNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFT----PS-- 119
P V GG ++ + G L+ G S++ G L ++ + P
Sbjct: 245 ----LPSPAVHVACGGHHTVILAENGNLYCTG------SNSSGQLGLGTNLSELHIPKLL 294
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP- 178
P T+ +++CG H + +G+ Y+ G +G+LGL + E+ +
Sbjct: 295 PRGMLRNETITRISCGESHTAVVTESGK--------LYTCGDGRHGKLGLEENENNVHEL 346
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
++ + + V +V CG HT L+ R+ N+ + +N Q H +++
Sbjct: 347 TFVQRYKE---LFVSDVACGGCHTILVGQRRDTNNRSQKE-------DNSQTEHIQKRNS 396
Query: 239 LVP 241
L P
Sbjct: 397 LPP 399
>gi|118375248|ref|XP_001020809.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila]
gi|89302576|gb|EAS00564.1| hypothetical protein TTHERM_00410160 [Tetrahymena thermophila SB210]
Length = 4058
Score = 80.1 bits (196), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/153 (28%), Positives = 78/153 (50%), Gaps = 17/153 (11%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F +V+++ACG + L + + + SWG N +G LGLGD R++P ++
Sbjct: 2328 FSMFSVIQIACGWSFCMILTRSHQLF--------SWGDNRSGNLGLGDTRYRIKPSLV-L 2378
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
P+ V + C + H+A + L+ +T+G G NGQLG + L+P++
Sbjct: 2379 LEFGKPFQVRFIDCQAQHSAAI--------QLDGKLYTWGQGLNGQLGINAQSNMLLPQR 2430
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
V + + + V CG+FH + +++ G ++WG
Sbjct: 2431 VGGILEQKNITQVSCGVFHMACITNDGFCYTWG 2463
Score = 75.1 bits (183), Expect = 8e-11, Method: Composition-based stats.
Identities = 68/298 (22%), Positives = 134/298 (44%), Gaps = 53/298 (17%)
Query: 67 NHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDF 124
N K +I + AG +AI+N ++ WG ++ + G + SP V
Sbjct: 652 NIKENRRITYIAAGYEYCMAIENKRLVYAWGR----NTDGQLGIGKTQYYVESPQMVLGL 707
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIET 183
G+ + +ACG H + L G+ Y S G++ +G+LGLG+R ++L+P++I
Sbjct: 708 EGNLMKAIACGENHTLFLTDTGQVY--------SCGSSKDGKLGLGNRTNTQLQPQLITN 759
Query: 184 FNQDSPWAVYEVTCGSFHTALLT------------HRKRPNDMLESMCWTFGLGENGQLG 231
++ V +++CG H+ L H ++ N ++ + +T+G +LG
Sbjct: 760 LSK-----VEQISCGQSHSMALAQDDFFKQDDDEEHARQIN--VKMVVYTWGNAWESKLG 812
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLC-PNASL- 289
HG ++ P +++ + Y + G H++ +++ ++ WG K G P+ ++
Sbjct: 813 HGDRENLYEPTKIQSNYLFKY---ISAGSHHSAALTTDDNLVVWGPYKYFGHTKPDENIK 869
Query: 290 ------TRNEAGDAISPILISGNGPHGPKFQDPVQVAC-GAAHTVLVTDDGYKLWSWG 340
T++E + + P L PK + V+ C G T +V K++ +G
Sbjct: 870 GKKVITTQHEYHEFMKPTL-------HPKITEKVRHVCLGDKTTFIVAKKDNKIYQYG 920
Score = 72.8 bits (177), Expect = 4e-10, Method: Composition-based stats.
Identities = 64/223 (28%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE-TFNQD 187
VV++ CG + L TY + L +WG N+ G +G GD + + +PKII+ N+
Sbjct: 261 VVQICCGLNFCLIL-----TYNFQVL---AWGDNSYGNIGTGDLDYQEKPKIIQFDENKG 312
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
+ ++CG+ H A ++ L +T+G G GQLGH + +P VK
Sbjct: 313 DDSRIQFISCGANHCAAVS--------LSGKLYTWGQGIQGQLGHQNVMNLSIPTAVKSE 364
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q +V V CG HT +++ G +S+G K N L + P+ I
Sbjct: 365 LQEKKVVYVSCGGAHTVCLTNEGYAYSFGNNK------NGQLGLGDQEQRNVPVKIQ--- 415
Query: 308 PHGPKFQD--PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
K Q+ V V CG +T ++T G K+++ G + LG
Sbjct: 416 ----KLQNYFIVNVVCGMNNTFILTQVG-KIFACGSNQHNKLG 453
Score = 55.8 bits (133), Expect = 5e-05, Method: Composition-based stats.
Identities = 54/210 (25%), Positives = 92/210 (43%), Gaps = 45/210 (21%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNC-----PLPDSSTEGGF-------------SLVSSFTP 118
V+ G S+A+ NAG L++WG+ + D E + +LV+S P
Sbjct: 2656 VQLGTFHSMALTNAGELYIWGSNESSQHAVDDLQIEQAYVDQAISKIKINVQTLVTSSLP 2715
Query: 119 SPVWDF---HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
S V F V +ACG+E+ +A+ + + Y WG N+ GQLG+G +
Sbjct: 2716 SLVNFFDIKENRRVSFIACGAEYCMAIENRRKVY--------GWGKNDQGQLGIGAISTI 2767
Query: 176 L-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
+ +P ++ + +V CG HT L+ E ++ G +G+LG G
Sbjct: 2768 VHKPTEVQGLEG---LLMKQVACGQVHTLFLSE--------EGCVYSCGSPTDGKLGLGK 2816
Query: 235 TQS-ALVPEQVKELPQYVYLVSVDCGLFHT 263
+ L P +++ L + + V CG H+
Sbjct: 2817 RDAIQLFPMKIQSLAK---IDKVACGYTHS 2843
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 42/167 (25%), Positives = 77/167 (46%), Gaps = 20/167 (11%)
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK-E 246
S ++V ++ CG +LT + +++G +G LG G T+ + P V E
Sbjct: 2329 SMFSVIQIACGWSFCMILTRSHQ--------LFSWGDNRSGNLGLGDTRYRIKPSLVLLE 2380
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + +DC H++ + G +++WG +GL N L N + + P + G
Sbjct: 2381 FGKPFQVRFIDCQAQHSAAIQLDGKLYTWG--QGL----NGQLGINAQSNMLLPQRVGGI 2434
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
++ QV+CG H +T+DG+ ++WG +G LG K +
Sbjct: 2435 LEQ----KNITQVSCGVFHMACITNDGF-CYTWGSNTNGQLGLDKDL 2476
Score = 53.9 bits (128), Expect = 2e-04, Method: Composition-based stats.
Identities = 68/282 (24%), Positives = 110/282 (39%), Gaps = 81/282 (28%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE--------- 173
DF V V G+ H +AL +AGE Y WG+N + Q + D +
Sbjct: 2647 DFISSEFVDVQLGTFHSMALTNAGEL--------YIWGSNESSQHAVDDLQIEQAYVDQA 2698
Query: 174 -SRLR-----------PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
S+++ P ++ F+ V + CG+ + + +R++
Sbjct: 2699 ISKIKINVQTLVTSSLPSLVNFFDIKENRRVSFIACGAEYCMAIENRRK----------V 2748
Query: 222 FGLGEN--GQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-- 276
+G G+N GQLG G + + P +V+ L + + + V CG HT +S G V+S G
Sbjct: 2749 YGWGKNDQGQLGIGAISTIVHKPTEVQGL-EGLLMKQVACGQVHTLFLSEEGCVYSCGSP 2807
Query: 277 MEKGLGLCPNASLTRNEAGDAIS--PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
+ LGL DAI P+ I +VACG H++ + +D Y
Sbjct: 2808 TDGKLGLGKR---------DAIQLFPMKIQ-------SLAKIDKVACGYTHSLALGEDVY 2851
Query: 335 ------------------KLWSWGRGRSGVLGTGKTIDFFAP 358
++SWG LG G+ + F P
Sbjct: 2852 VDEDFDDFNLLQNEFNKKVVYSWGSAYESKLGHGEKENLFEP 2893
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 49/217 (22%), Positives = 96/217 (44%), Gaps = 45/217 (20%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLP-------------DSSTEGGFSLVSS----- 115
I ++ G ++A+ NAG +++WG+ + D S E +++ +
Sbjct: 583 IVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQEYDESNEKNINIIQNDISKE 642
Query: 116 FTPSPVWDFH---GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
PS V F+ + +A G E+ +A+ + + LV Y+WG N +GQLG+G
Sbjct: 643 TLPSVVSFFNIKENRRITYIAAGYEYCMAI-------ENKRLV-YAWGRNTDGQLGIGKT 694
Query: 173 ESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+ + P+++ + + + CG HT LT ++ G ++G+LG
Sbjct: 695 QYYVESPQMVLGLEGN---LMKAIACGENHTLFLTD--------TGQVYSCGSSKDGKLG 743
Query: 232 HGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS 267
G T + L P+ + L + + + CG H+ ++
Sbjct: 744 LGNRTNTQLQPQLITNLSK---VEQISCGQSHSMALA 777
Score = 50.1 bits (118), Expect = 0.003, Method: Composition-based stats.
Identities = 61/276 (22%), Positives = 100/276 (36%), Gaps = 70/276 (25%)
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYK-GEDLVC------------YSWGANNNGQLGL 169
DF + +V + G H +AL +AGE Y G + +C Y N +
Sbjct: 577 DFISNDIVDIELGVFHTMALTNAGEIYVWGSNQMCQHGCISNIIRQEYDESNEKNINIIQ 636
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
D P ++ FN + + G + + KR + + +G +GQ
Sbjct: 637 NDISKETLPSVVSFFNIKENRRITYIAAG-YEYCMAIENKR-------LVYAWGRNTDGQ 688
Query: 230 LGHGTTQSALVPEQVKELPQYV------YLVSVDCGLFHTSVVSSAGDVWSWGMEK---- 279
LG G TQ + E PQ V + ++ CG HT ++ G V+S G K
Sbjct: 689 LGIGKTQYYV------ESPQMVLGLEGNLMKAIACGENHTLFLTDTGQVYSCGSSKDGKL 742
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK---- 335
GLG N + P LI+ Q++CG +H++ + D +
Sbjct: 743 GLG---------NRTNTQLQPQLIT-------NLSKVEQISCGQSHSMALAQDDFFKQDD 786
Query: 336 -------------LWSWGRGRSGVLGTGKTIDFFAP 358
+++WG LG G + + P
Sbjct: 787 DEEHARQINVKMVVYTWGNAWESKLGHGDRENLYEP 822
Score = 45.4 bits (106), Expect = 0.062, Method: Composition-based stats.
Identities = 36/143 (25%), Positives = 61/143 (42%), Gaps = 18/143 (12%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS-FTPSPVWD-FHGHT 128
P ++ + S AI G L+ WG + + G + S+ P V
Sbjct: 2384 PFQVRFIDCQAQHSAAIQLDGKLYTWGQ----GLNGQLGINAQSNMLLPQRVGGILEQKN 2439
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR-PKIIETFNQD 187
+ +V+CG H+ + + G CY+WG+N NGQLGL ++ P ++E
Sbjct: 2440 ITQVSCGVFHMACITNDG--------FCYTWGSNTNGQLGLDKDLPQINYPCVVERLQS- 2490
Query: 188 SPWAVYEVTCGSFHTALLTHRKR 210
+ + +VTCG +T + R
Sbjct: 2491 --YFIIQVTCGYNNTFFFSQNGR 2511
Score = 43.1 bits (100), Expect = 0.33, Method: Composition-based stats.
Identities = 55/234 (23%), Positives = 100/234 (42%), Gaps = 43/234 (18%)
Query: 131 KVACGSEHVVALVSAGETYKGEDL-------------VCYSWGANNNGQLGLGDRESRLR 177
KVACG H +AL + Y ED V YSWG+ +LG G++E+
Sbjct: 2835 KVACGYTHSLAL--GEDVYVDEDFDDFNLLQNEFNKKVVYSWGSAYESKLGHGEKENLFE 2892
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT--- 234
P I+ + ++ ++ G H+A + K N ++ FG + +
Sbjct: 2893 PNRIQ-----ANFSFRDIFAGGHHSAAID--KEHNLIVWGPYIYFGYQKPEEKNKKNYRQ 2945
Query: 235 -----TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCP-N 286
+ L P Q +L Q V V++ G ++ V+++ ++ WG+ + C N
Sbjct: 2946 DVNEFIRPTLHPRQ--QLIQQVQKVAL--GDKYSIVLNNINQIFQWGVFDKTYENKCKEN 3001
Query: 287 ASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
+LTRN+ +++ + N P Q+A H L++ + +L++WG
Sbjct: 3002 PNLTRNQINESLMINIQKINAPS----STITQIAVANNHAALISKN--QLYTWG 3049
>gi|328868228|gb|EGG16606.1| regulator of chromosome condensation domain-containing protein
[Dictyostelium fasciculatum]
Length = 1076
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 119/293 (40%), Gaps = 52/293 (17%)
Query: 63 DSKTNHKAPI----------KICSVKAGGMMSLAIDNAGALWMWGN-----CPLP----- 102
D+ NH PI +I V G +L++ GA++ WG+ C LP
Sbjct: 288 DNLWNHTQPIPRRIGTLDGVQITMVACGSKHTLSLTCDGAVYAWGSNRNGQCGLPLDYPI 347
Query: 103 -DSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGA 161
T + S + ++CG H VA+ + YSWG
Sbjct: 348 LHQPTRVKIEYNQTNNNSNNNTSTFVIIGSISCGYSHSVAV-------QAHSSQLYSWGK 400
Query: 162 NNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
++GQLGLG R P I F D + + CG +HT LT +S ++
Sbjct: 401 GSDGQLGLGSRSDHSSPTAIPLFTSD---PIVRICCGHYHTVALTS--------QSKLYS 449
Query: 222 FGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EK 279
+G+G LGHG + LVP ++ +V++ CG HT+V++ G ++G
Sbjct: 450 WGMG--FALGHGQAKDKLVPTLIEAFSPCTKVVNIACGFSHTAVLTEKGKCLTFGHGDHG 507
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDD 332
LG +NE+ ++ PI P+G ++CG +T L+ D
Sbjct: 508 QLGYFNK----KNESTSSLVPI-----TPNGIDQLQISSISCGWFNTFLIVKD 551
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 128/288 (44%), Gaps = 47/288 (16%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG------D 171
P + G + VACGS+H ++L G Y+WG+N NGQ GL
Sbjct: 298 PRRIGTLDGVQITMVACGSKHTLSLTCDG--------AVYAWGSNRNGQCGLPLDYPILH 349
Query: 172 RESRLRPKIIETFNQDSPWA-----VYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLG 225
+ +R++ + +T N + + ++CG H+ A+ H S +++G G
Sbjct: 350 QPTRVKIEYNQTNNNSNNNTSTFVIIGSISCGYSHSVAVQAH--------SSQLYSWGKG 401
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVY--LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
+GQLG G+ P + P + +V + CG +HT ++S ++SWGM LG
Sbjct: 402 SDGQLGLGSRSDHSSPTAI---PLFTSDPIVRICCGHYHTVALTSQSKLYSWGMGFALG- 457
Query: 284 CPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGR 343
+A D + P LI P V +ACG +HT ++T+ G K ++G G
Sbjct: 458 -------HGQAKDKLVPTLIEAFSP----CTKVVNIACGFSHTAVLTEKG-KCLTFGHGD 505
Query: 344 SGVLGT-GKTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
G LG K + + + + P ++ + ++ G + + KDL
Sbjct: 506 HGQLGYFNKKNESTSSLVPITPNGIDQLQISSISCGWFNTFLIVKDLN 553
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 23/120 (19%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
P ++ F G +++ G H + + S G+ YSWG+N+ GQLG GD +
Sbjct: 83 PDTIYQFIGKNPQQLSSGHNHQLLITSGGD--------IYSWGSNSKGQLGHGDISHNHQ 134
Query: 178 PKIIETFNQDSPWAVY-----EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ I F+ A+Y +V G+ + +LT E ++FG+ GQLG+
Sbjct: 135 IEPIRKFSLLK--ALYGIVPIQVAAGNEFSMVLTS--------EGTVYSFGVSNEGQLGN 184
>gi|58533115|gb|AAW78912.1| putative chromosome condensation factor [Triticum turgidum]
Length = 882
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/290 (25%), Positives = 121/290 (41%), Gaps = 44/290 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG +S+ +++ S P P+ V V CG H
Sbjct: 32 DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ GE + +WG ++ G+LG G RE + P+++E+ + + V CG FH
Sbjct: 92 VTRNGEVF--------TWGEDSGGRLGHGTREDSVHPRLVESL---AACNIDFVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHGT +P ++ + + + V CG +
Sbjct: 141 TCAVT------TTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGPLEGLQIAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + L + +SG + VAC
Sbjct: 195 HTALITSMGQLFTFG-DGSFGVLGHGDLKSISCPREVES--LSG--------LKTIAVAC 243
Query: 322 GAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 244 GVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCV 293
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 127/296 (42%), Gaps = 30/296 (10%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHT 128
A I V G + A+ G L+ WG+ + G + V + P + G
Sbjct: 127 AACNIDFVACGEFHTCAVTTTGELYTWGD-GTHNVGLLGHGTDVGHWIPRRISGPLEGLQ 185
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ V+CG+ H + S G+ +++G + G LG GD +S P+ +E+ S
Sbjct: 186 IAYVSCGTWHTALITSMGQ--------LFTFGDGSFGVLGHGDLKSISCPREVESL---S 234
Query: 189 PWAVYEVTCGSFHTALLTH---RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V CG +HTA + + + +T+G G+ +LGHG ++ L P V
Sbjct: 235 GLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVA 294
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
L Y + V CG T ++++G VW+ G G N N G P L+
Sbjct: 295 SLIDYDFY-RVACGHSLTVGLTTSGKVWTMG-NSVYGQLGNL----NSDG---RPCLVED 345
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +Q+ACG+ H ++T ++++WG+G +G LG G D P V
Sbjct: 346 K----IASEHVLQIACGSYHVAVLTSRS-EVFTWGKGANGRLGHGDIEDRKVPTTV 396
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 106/261 (40%), Gaps = 30/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++I V G + I + G L+ +G+ G L S P V G +
Sbjct: 184 LQIAYVSCGTWHTALITSMGQLFTFGDGSF---GVLGHGDLKSISCPREVESLSGLKTIA 240
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V T + ++WG + +LG GD+E+RL+P + +
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLKPTCVASLID-- 298
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ Y V CG T LT WT G GQLG+ S P V++
Sbjct: 299 -YDFYRVACGHSLTVGLT--------TSGKVWTMGNSVYGQLGN--LNSDGRPCLVEDKI 347
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+++ + CG +H +V++S +V++WG KG N L + D P +
Sbjct: 348 ASEHVLQIACGSYHVAVLTSRSEVFTWG--KG----ANGRLGHGDIEDRKVPTTVEALRD 401
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
+ +ACGA T +
Sbjct: 402 RAVR-----HIACGANFTAAI 417
>gi|296189260|ref|XP_002742707.1| PREDICTED: RCC1 and BTB domain-containing protein 1 [Callithrix
jacchus]
Length = 547
Score = 80.1 bits (196), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 93/219 (42%), Gaps = 22/219 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLT----- 206
ED V Y+WG N QLG G + P I+ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGVAP--IQVCTNLLIKQVVEVACGSHHSMALAADGEF 149
Query: 207 ---HRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+ + +G GQ+G G+T + P +V +V + CG +
Sbjct: 150 RVAGGHSLSGSSGYQVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSS 209
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
V G+V+ WG N L G+ ++P+ ++ H Q+ CG
Sbjct: 210 MAVLDNGEVYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGY 258
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
AHT+ +TD+G L++WG G LGTG + +PA ++
Sbjct: 259 AHTLALTDEGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 296
Score = 65.1 bits (157), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 91/349 (26%), Positives = 139/349 (39%), Gaps = 55/349 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + + T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGVAPIQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGE--------TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
VV+VACGS H +AL + GE ++WG NN GQ+G G ++ P+
Sbjct: 130 VVEVACGSHHSMALAADGEFRVAGGHSLSGSSGYQVFAWGYNNCGQVGSGSTANQPTPRK 189
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALV 240
+ N V + CG T D E W G NGQLG G + L
Sbjct: 190 VT--NCLHIKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLT 239
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
P +V L V + + CG HT ++ G +++WG L + +SP
Sbjct: 240 PVRVAAL-HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSP 292
Query: 301 ILISGNGPHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
I + + V++A C +AHT G ++ WG RG+S +L T
Sbjct: 293 AHIM------VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 346
Query: 351 KTIDFFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
FA V W L+ E +D L E K+ + E D K
Sbjct: 347 DVFACFATPAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 390
Score = 45.8 bits (107), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 27/158 (17%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG----- 333
+ L ++PI + N + V+VACG+ H++ + DG
Sbjct: 103 G------YSQLGNGTTNQGVAPIQVCTN----LLIKQVVEVACGSHHSMALAADGEFRVA 152
Query: 334 ----------YKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Y++++WG G +G+G T + P V
Sbjct: 153 GGHSLSGSSGYQVFAWGYNNCGQVGSGSTANQPTPRKV 190
>gi|406991558|gb|EKE11048.1| hypothetical protein ACD_15C00149G0001, partial [uncultured
bacterium]
Length = 1643
Score = 80.1 bits (196), Expect = 3e-12, Method: Composition-based stats.
Identities = 95/343 (27%), Positives = 137/343 (39%), Gaps = 51/343 (14%)
Query: 26 SLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSL 85
SL+ DG + G N I F+ P + D + T I S+ G SL
Sbjct: 427 SLSLKSDGTVWSWGKNDKGQLGINSFIDKKTPVQVLDSTGTGFLT--DIVSIATGNKFSL 484
Query: 86 AIDNAGALWMWGNCPLPDSSTE-GGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVS 144
A+ N G W WG DS+ + G +L P + D A G+ V+ +
Sbjct: 485 AVKNDGKAWSWGY----DSTGQLGDNALTERSLPFQILD-------TGATGNLSQVSFID 533
Query: 145 AGETY-----KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF---NQDSPWAVYEVT 196
G+ Y D +SWG N+ GQLG + P I T+ N + P V V+
Sbjct: 534 GGDGYAVAFKTDSDGSVWSWGKNDKGQLGNNTVDPVRTP--ISTWGPANGNIP-DVQSVS 590
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--- 253
G +HT L + W +G NGQLG Q+ L P QV+ + L
Sbjct: 591 SGRYHTIALK--------TDGTVWDWGGNGNGQLGTTAGQNRLTPIQVRGPGGFGNLENI 642
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
V V G +H+ S G VW+WG E G G + + DA +G G
Sbjct: 643 VEVAAGDYHSLARRSDGTVWAWGRGSLGELGDGTWISTRYNPVQVKDA------AGTG-- 694
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+ V ++ G ++V + DG +W+WG+ G LG T
Sbjct: 695 --FLTNVVAISAGEDYSVALRSDG-TVWAWGKNDRGQLGDNST 734
Score = 78.6 bits (192), Expect = 8e-12, Method: Composition-based stats.
Identities = 86/325 (26%), Positives = 132/325 (40%), Gaps = 49/325 (15%)
Query: 60 LEDDSKTNHKAPIKICSVKAGGMMS--------------LAIDNAGALWMWGNCPLPDSS 105
L D++ T P +I A G +S D+ G++W WG D
Sbjct: 503 LGDNALTERSLPFQILDTGATGNLSQVSFIDGGDGYAVAFKTDSDGSVWSWGK---NDKG 559
Query: 106 TEGGFSLVSSFTPSPVWD-FHGHT--VVKVACGSEHVVALVSAGETYKGEDLVCYSWGAN 162
G ++ TP W +G+ V V+ G H +AL + G + WG N
Sbjct: 560 QLGNNTVDPVRTPISTWGPANGNIPDVQSVSSGRYHTIALKTDG--------TVWDWGGN 611
Query: 163 NNGQLGLGDRESRLRP-KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWT 221
NGQLG ++RL P ++ + + EV G +H+ L R + W
Sbjct: 612 GNGQLGTTAGQNRLTPIQVRGPGGFGNLENIVEVAAGDYHS--LARRS------DGTVWA 663
Query: 222 FGLGENGQLGHGTTQSALV-PEQVKELPQYVYL---VSVDCGLFHTSVVSSAGDVWSWGM 277
+G G G+LG GT S P QVK+ +L V++ G ++ + S G VW+WG
Sbjct: 664 WGRGSLGELGDGTWISTRYNPVQVKDAAGTGFLTNVVAISAGEDYSVALRSDGTVWAWGK 723
Query: 278 EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
L N++ +N P+ + G G G F + V ++ VLV + ++
Sbjct: 724 NDRGQLGDNSTNYKN------LPVQVLGVG--GAGFLNNVSSISAGSNFVLVAKNDGTVF 775
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVL 362
SWG +G LG P VL
Sbjct: 776 SWGHNANGQLGDNTVSGKLTPIQVL 800
Score = 75.9 bits (185), Expect = 5e-11, Method: Composition-based stats.
Identities = 77/297 (25%), Positives = 119/297 (40%), Gaps = 35/297 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG----HTV 129
+ ++ AG LAI + ++W WG S G +L+ +TP V G + +
Sbjct: 193 VAAISAGNSFVLAIKSDNSVWSWGE---NTSGQLGDKTLIDRYTPVQVVGAGGSGYLNDI 249
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDS 188
V+ G+ H +AL S G +SWG N+NGQLG + P +++
Sbjct: 250 EMVSAGTNHSLALKSDG--------TVWSWGNNDNGQLGNNLVSLKNIPVQVVGPGGIGV 301
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V V+ G ++ L + W++G GQLG T P QV +
Sbjct: 302 LSNVISVSAGEGYSLALKS--------DGTVWSWGKNTVGQLGDNTIVEKHYPVQVLGVG 353
Query: 249 QYVYL---VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+L S+ G + V S G V +WG + L N D+ P+ + G
Sbjct: 354 GVEFLSSVASISAGASYALAVKSDGTVVAWGKND------SGQLGNNSYADSYVPVQVLG 407
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + V+ H++ + DG +WSWG+ G LG ID P VL
Sbjct: 408 VDGMG-NLSSIISVSADGTHSLSLKSDG-TVWSWGKNDKGQLGINSFIDKKTPVQVL 462
Score = 72.4 bits (176), Expect = 5e-10, Method: Composition-based stats.
Identities = 76/295 (25%), Positives = 121/295 (41%), Gaps = 37/295 (12%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ ++ AG S+A+ + G +W WG D G S P V G
Sbjct: 699 VVAISAGEDYSVALRSDGTVWAWGK---NDRGQLGDNSTNYKNLPVQVLGVGG------- 748
Query: 134 CGSEHVVALVSAGETY---KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
G + V+ +SAG + D +SWG N NGQLG +L P I+ N ++
Sbjct: 749 AGFLNNVSSISAGSNFVLVAKNDGTVFSWGHNANGQLGDNTVSGKLTP--IQVLNINN-- 804
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT-QSALVPEQVKELPQ 249
V ++ G H+ L + W++G NGQLG GT ++L+P QVK
Sbjct: 805 -VSSISAGYAHSLALK--------TDGSVWSWGWNGNGQLGEGTNIDNSLLPLQVKNSTG 855
Query: 250 YVYLVSVD---CGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+L + G H V+ S ++WG+ L N+ + +N + +++ N
Sbjct: 856 TGFLSDISKIATGSNHCLVMKSDNTAFAWGLNGNGQLGNNSIVNKN-----LPVQVLNSN 910
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G F V G A++ ++ +W+WG G LG + P V
Sbjct: 911 GSSG--FTGVSFVEAGFANSTIIKSSDSLVWNWGINSYGELGNNRVDGTLLPVSV 963
Score = 69.7 bits (169), Expect = 3e-09, Method: Composition-based stats.
Identities = 85/311 (27%), Positives = 128/311 (41%), Gaps = 35/311 (11%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V AG SLA+ + G +W WGN + + + G +LV S PV V G
Sbjct: 252 VSAGTNHSLALKSDGTVWSWGN----NDNGQLGNNLV-SLKNIPV-----QVVGPGGIGV 301
Query: 137 EHVVALVSAGETYK---GEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPWAV 192
V VSAGE Y D +SWG N GQLG + P +++ + +V
Sbjct: 302 LSNVISVSAGEGYSLALKSDGTVWSWGKNTVGQLGDNTIVEKHYPVQVLGVGGVEFLSSV 361
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ---VKELPQ 249
++ G+ + + + +G ++GQLG+ + + VP Q V +
Sbjct: 362 ASISAGASYALAVKS--------DGTVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMGN 413
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGP 308
++SV H+ + S G VWSWG +KG L N D +P+ + +
Sbjct: 414 LSSIISVSADGTHSLSLKSDGTVWSWGKNDKG-------QLGINSFIDKKTPVQVLDSTG 466
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
G D V +A G ++ V +DG K WSWG +G LG + P +L T
Sbjct: 467 TG-FLTDIVSIATGNKFSLAVKNDG-KAWSWGYDSTGQLGDNALTERSLPFQILDTGATG 524
Query: 369 EFKQDELNTGG 379
Q GG
Sbjct: 525 NLSQVSFIDGG 535
Score = 67.4 bits (163), Expect = 1e-08, Method: Composition-based stats.
Identities = 74/300 (24%), Positives = 114/300 (38%), Gaps = 34/300 (11%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG----HTV 129
+ SV AG SLA+ + G +W WG + G ++V P V G +V
Sbjct: 305 VISVSAGEGYSLALKSDGTVWSWGKNTV---GQLGDNTIVEKHYPVQVLGVGGVEFLSSV 361
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDS 188
++ G+ + +A+ S G +WG N++GQLG P +++ +
Sbjct: 362 ASISAGASYALAVKSDG--------TVVAWGKNDSGQLGNNSYADSYVPVQVLGVDGMGN 413
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
++ V+ H+ L + W++G + GQLG + P QV +
Sbjct: 414 LSSIISVSADGTHSLSLKS--------DGTVWSWGKNDKGQLGINSFIDKKTPVQVLDST 465
Query: 249 QYVYL---VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG 305
+L VS+ G + V + G WSWG + L NA R+ P I
Sbjct: 466 GTGFLTDIVSIATGNKFSLAVKNDGKAWSWGYDSTGQLGDNALTERS------LPFQILD 519
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPP 365
G G Q TD +WSWG+ G LG T+D I W P
Sbjct: 520 TGATGNLSQVSFIDGGDGYAVAFKTDSDGSVWSWGKNDKGQLGN-NTVDPVRTPISTWGP 578
>gi|392347372|ref|XP_342701.4| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1185
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 50/299 (16%)
Query: 56 APDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFS 111
+P S + + + I V G S+A+ + G ++ WG + +EG G S
Sbjct: 215 SPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG------AGSEGQLGIGES 268
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
SF P+ + G +++V+CG H +AL ED +SWG+N GQLGLG+
Sbjct: 269 KEISFMPTKINSLAGIKIIQVSCGHYHSLAL--------SEDGQVFSWGSNRQGQLGLGN 320
Query: 172 RE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--G 228
S+ P+ +++ + P A +V G H+ L+ M +FG G N G
Sbjct: 321 NLCSQASPQKVKSL-EGIPLA--QVAAGGTHSFALS----------LMGTSFGWGNNRSG 367
Query: 229 QL---GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
QL G+ + P + L + + +V + CG HTSV++ G V+++G L
Sbjct: 368 QLALSGNSAKEQIYKPHSIGAL-KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQH 426
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ R P LI G G H Q+ CG+ HT+ ++ S GRG S
Sbjct: 427 SPRSGRG------GPQLIEGIGGHVS------QIECGSYHTIAYVYTTGQVVSLGRGPS 473
Score = 76.3 bits (186), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G ++K A G H + L S Y S G N+ GQLG +S RP+ I+
Sbjct: 178 GLKLLKAASGERHSLLLFSNHRVY--------SCGDNSRGQLGQKSPQSTKRPEPIQAL- 228
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV 244
S + V+CG H+ + H+ R +T+G G GQLG G ++ + +P ++
Sbjct: 229 --STVHIDLVSCGKEHSVAVCHQGR--------VFTWGAGSEGQLGIGESKEISFMPTKI 278
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAI 298
L + ++ V CG +H+ +S G V+SWG + GLG LC AS + ++ + I
Sbjct: 279 NSLAG-IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI 337
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P+ QVA G H+ ++ G + WG RSG L
Sbjct: 338 -PL---------------AQVAAGGTHSFALSLMGTS-FGWGNNRSGQLA 370
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 33/237 (13%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPS 119
+K N A IKI V G SLA+ G ++ WG S+ +G G +L S +P
Sbjct: 276 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG------SNRQGQLGLGNNLCSQASPQ 329
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
V G + +VA G H AL G + + WG N +GQL L ++ +
Sbjct: 330 KVKSLEGIPLAQVAAGGTHSFALSLMGTS--------FGWGNNRSGQLALSGNSAKEQIY 381
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ V ++CG HT++LT + +TFG + QL H
Sbjct: 382 KPHSIGALKTLNVVYISCGYEHTSVLTE--------DGQVFTFGGSSSEQLQHSPRSGRG 433
Query: 240 VPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
P+ ++ + +V ++CG +HT + V + G V S G +G NA T EA
Sbjct: 434 GPQLIEGIGGHV--SQIECGSYHTIAYVYTTGQVVSLG--RGPSCTSNA--THQEAA 484
Score = 59.3 bits (142), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R +P+ +E + + + G H+ LL R ++ G GQLG +
Sbjct: 167 RRQPRRLEA---GTGLKLLKAASGERHSLLLFSNHR--------VYSCGDNSRGQLGQKS 215
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRN 292
QS PE ++ L V++ V CG H+ V G V++WG E LG+ + ++
Sbjct: 216 PQSTKRPEPIQALST-VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-- 272
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P I N G K +QV+CG H++ +++DG +++SWG R G LG G
Sbjct: 273 -----FMPTKI--NSLAGIKI---IQVSCGHYHSLALSEDG-QVFSWGSNRQGQLGLGNN 321
Query: 353 I 353
+
Sbjct: 322 L 322
>gi|348688462|gb|EGZ28276.1| hypothetical protein PHYSODRAFT_476799 [Phytophthora sojae]
Length = 1699
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 115/247 (46%), Gaps = 40/247 (16%)
Query: 120 PVWDFHGHTVVKVAC--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
PV V +A G EH++AL G + YSWG N+ GQLG + +++
Sbjct: 407 PVQALRSQRVKFIAASNGCEHMIALTDTG--------LAYSWGYNDRGQLGHENLATKIH 458
Query: 178 -PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ 236
PK+IE+ +D V+ H+A++T +TFG+ + GQLG TQ
Sbjct: 459 VPKLIESL-KDKKLGFASVS--YHHSAVITDAGE--------LYTFGMNDCGQLGLDHTQ 507
Query: 237 SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEA 294
P+ VK L + + V CGL+HT + ++AG++++ G LGL N +
Sbjct: 508 HQSTPQLVKSL-EATEVSMVACGLYHTIICTAAGELFTCGKNDYGQLGLAHNRQIKL--- 563
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
P L++ + VACG H+V+V+ G + +S+GR G LG G +
Sbjct: 564 -----PTLVALPN------EMVSFVACGYYHSVVVSTGG-RAFSFGRNDYGQLGIGSKVH 611
Query: 355 FFAPAIV 361
P +V
Sbjct: 612 QNVPNVV 618
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 89/218 (40%), Gaps = 30/218 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S I +AG L+ +G + D G TP V V VACG H +
Sbjct: 481 SAVITDAGELYTFG---MNDCGQLGLDHTQHQSTPQLVKSLEATEVSMVACGLYHTIICT 537
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+AGE ++ G N+ GQLGL P ++ N+ V V CG +H+
Sbjct: 538 AAGE--------LFTCGKNDYGQLGLAHNRQIKLPTLVALPNE----MVSFVACGYYHSV 585
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
+++ R ++FG + GQLG G+ VP V L +V CG +HT
Sbjct: 586 VVSTGGR--------AFSFGRNDYGQLGIGSKVHQNVP-NVVALSSNTRMVRATCGCYHT 636
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPI 301
++S G V+ +G L + DA+ P+
Sbjct: 637 VLLSEQGQVYVFGRNN------KGQLGNRGSADALLPV 668
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 63/137 (45%), Gaps = 21/137 (15%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG H V + + G +S+G N+ GQLG+G + + P ++ S
Sbjct: 577 VACGYYHSVVVSTGGR--------AFSFGRNDYGQLGIGSKVHQNVPNVVAL---SSNTR 625
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY- 250
+ TCG +HT LL+ + + FG GQLG+ + AL+P +K P+
Sbjct: 626 MVRATCGCYHTVLLSE--------QGQVYVFGRNNKGQLGNRGSADALLPVPLKVRPEKN 677
Query: 251 -VYLVSVDCGLFHTSVV 266
V V G + TS++
Sbjct: 678 SRRCVDVAAGFYTTSLI 694
Score = 45.1 bits (105), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 58/148 (39%), Gaps = 16/148 (10%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGS 136
V G S+ + G + +G D G S V P+ V +V+ CG
Sbjct: 577 VACGYYHSVVVSTGGRAFSFGRN---DYGQLGIGSKVHQNVPNVVALSSNTRMVRATCGC 633
Query: 137 EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVT 196
H V L G+ Y +G NN GQLG L P ++ + + +V
Sbjct: 634 YHTVLLSEQGQVY--------VFGRNNKGQLGNRGSADALLPVPLKVRPEKNSRRCVDVA 685
Query: 197 CGSFHTALLTHRKRPND-----MLESMC 219
G + T+L+ RKR ND ML+ C
Sbjct: 686 AGFYTTSLIVERKRENDDGDVIMLDQSC 713
Score = 40.8 bits (94), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 86/213 (40%), Gaps = 36/213 (16%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
YS G N+ G+LG GD R + + D + +V G+ A+LT+ E
Sbjct: 331 YSCGQNSYGELGTGDDIERHQLTSVSLCGWDD---IRQVVSGNETLAVLTN--------E 379
Query: 217 SMCWTFGLGENGQLGHGT-TQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ T GL ++GQ G G + ++ V+ L Q V ++ G H ++ G +S
Sbjct: 380 GVVLTCGLNKSGQCGQGHFDERVMMLRPVQALRSQRVKFIAASNGCEHMIALTDTGLAYS 439
Query: 275 WGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ------VACGAAHTVL 328
WG R + G I H PK + ++ + H+ +
Sbjct: 440 WGYND-----------RGQLGHENLATKI-----HVPKLIESLKDKKLGFASVSYHHSAV 483
Query: 329 VTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+TD G +L+++G G LG T P +V
Sbjct: 484 ITDAG-ELYTFGMNDCGQLGLDHTQHQSTPQLV 515
>gi|296083842|emb|CBI24230.3| unnamed protein product [Vitis vinifera]
Length = 953
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 110/260 (42%), Gaps = 53/260 (20%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG H + GE +SWG + G+LG G L PK+I++ + +
Sbjct: 246 VQNIACGGRHAALVTKQGE--------IFSWGEESGGRLGHGVDSDVLHPKLIDSLSNTN 297
Query: 189 PWAVYEVTCGSFHTALLT-------------------------HRKRPNDMLESMCWTFG 223
+ V CG +HT +T R + +T+G
Sbjct: 298 ---IELVACGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWG 354
Query: 224 LGENGQLGHGTTQSALVPEQVKEL--PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
G+ G+LGHG ++ LVP V L P + V CG T ++++G V++ G
Sbjct: 355 DGDKGRLGHGDKEAKLVPTCVAALVDPNFCR---VACGHSLTVALTTSGHVYTMG----- 406
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
P N D P + G F + ++ACGA H ++T ++++WG+
Sbjct: 407 --SPVYGQLGNPQADGKLPTRVEGK--LAKSFVE--EIACGAYHVAVLTSR-TEVYTWGK 459
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G +G LG G T D +P +V
Sbjct: 460 GANGRLGHGDTDDRNSPTLV 479
Score = 62.8 bits (151), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 112/284 (39%), Gaps = 53/284 (18%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ + ++ GG + + G ++ WG +S G + S + D +T ++
Sbjct: 244 LDVQNIACGGRHAALVTKQGEIFSWGE----ESGGRLGHGVDSDVLHPKLIDSLSNTNIE 299
Query: 132 -VACGSEHVVALVSAGETY--------------------KGEDLVC-----YSWGANNNG 165
VACG H A+ +G+ Y + L C ++WG + G
Sbjct: 300 LVACGEYHTCAVTLSGDLYTWGDGTYNFVFQNPGKWSPSRATALNCSSGKLFTWGDGDKG 359
Query: 166 QLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLG 225
+LG GD+E++L P + + V CG T LT +T G
Sbjct: 360 RLGHGDKEAKLVPTCVAALVDPN---FCRVACGHSLTVALT--------TSGHVYTMGSP 408
Query: 226 ENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
GQLG+ L P +V+ ++ + CG +H +V++S +V++WG KG
Sbjct: 409 VYGQLGNPQADGKL-PTRVEGKLAKSFVEEIACGAYHVAVLTSRTEVYTWG--KGA---- 461
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
N L + D SP L+ K + +ACG T +
Sbjct: 462 NGRLGHGDTDDRNSPTLV-----EALKDKQVKSIACGTNFTATI 500
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 66/157 (42%), Gaps = 36/157 (22%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGN-------CPLPD----SSTEGGFSLVSSFTPSPVW 122
C V G +++A+ +G ++ G+ P D + EG L SF
Sbjct: 383 FCRVACGHSLTVALTTSGHVYTMGSPVYGQLGNPQADGKLPTRVEG--KLAKSF------ 434
Query: 123 DFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIE 182
V ++ACG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 435 ------VEEIACGAYHVAVLTSRTEVY--------TWGKGANGRLGHGDTDDRNSPTLVE 480
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + K + + +SMC
Sbjct: 481 ALKDKQ---VKSIACGTNFTATICLHKWVSGVDQSMC 514
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 50/110 (45%), Gaps = 13/110 (11%)
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G +L+P+ + E + + ++ CG H ++V+ G+++SWG E G L
Sbjct: 227 GMKMDSLLPKAL-ESAVVLDVQNIACGGRHAALVTKQGEIFSWGEESG------GRLGHG 279
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
D + P LI + VACG HT VT G L++WG G
Sbjct: 280 VDSDVLHPKLIDSLSNTNIEL-----VACGEYHTCAVTLSG-DLYTWGDG 323
>gi|357135039|ref|XP_003569119.1| PREDICTED: uncharacterized protein LOC100832036 [Brachypodium
distachyon]
Length = 913
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 123/290 (42%), Gaps = 44/290 (15%)
Query: 88 DNAGALWMWGNCPLPDSSTEGGFSLVSS------FTPSPVWDFHGHTVVKVACGSEHVVA 141
D+ G +++WG +S+ +++ S P P+ V V CG H
Sbjct: 32 DSLGDVYVWGEVVCDNSARTSSDTVIRSTGKTDFLLPKPLESNLVLDVYHVDCGVRHASL 91
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
+ +GE + +WG ++ G+LG G RE + P+++E+ + + V CG FH
Sbjct: 92 VTRSGEVF--------TWGEDSGGRLGHGTREDSVHPRLVESL---AACNIDFVACGEFH 140
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLF 261
T +T E W G G LGHGT +P ++ + + + V CG +
Sbjct: 141 TCAVT------TTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGALEGLQVAYVSCGTW 194
Query: 262 HTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
HT++++S G ++++G + G+ + ++ + +SG + VAC
Sbjct: 195 HTALITSMGQLFTFG-DGSFGVLGHGNVKSISCPREVES--LSG--------LKTIAVAC 243
Query: 322 GAAHT-----VLVTDDGY-----KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G HT V+VT KL++WG G LG G P V
Sbjct: 244 GVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCV 293
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/300 (26%), Positives = 129/300 (43%), Gaps = 38/300 (12%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWG----NCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
A I V G + A+ G L+ WG N L T+ G + + +
Sbjct: 127 AACNIDFVACGEFHTCAVTTTGELYTWGDGTHNVGLLGHGTDVGHWIPRRISGA----LE 182
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V V+CG+ H + S G+ +++G + G LG G+ +S P+ +E+
Sbjct: 183 GLQVAYVSCGTWHTALITSMGQ--------LFTFGDGSFGVLGHGNVKSISCPREVESL- 233
Query: 186 QDSPWAVYEVTCGSFHTALLTH---RKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
S V CG +HTA + + + +T+G G+ +LGHG ++ L P
Sbjct: 234 --SGLKTIAVACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPT 291
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME-KGLGLCPNASLTRNEAGDAISPI 301
V L Y + V CG T ++++G VW+ G G PN+ GD I+
Sbjct: 292 CVASLIDYDFY-RVACGHSLTVGLTTSGKVWTMGNSVYGQLGNPNSDGRPCLVGDKITNE 350
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ +QVACG+ H ++T ++++WG+G +G LG G D P +V
Sbjct: 351 HV-------------LQVACGSYHVSVLTSRS-EVFTWGKGANGRLGHGDIEDQKVPTLV 396
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/261 (26%), Positives = 107/261 (40%), Gaps = 30/261 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ V G + I + G L+ +G+ G ++ S P V G +
Sbjct: 184 LQVAYVSCGTWHTALITSMGQLFTFGDGSF---GVLGHGNVKSISCPREVESLSGLKTIA 240
Query: 132 VACGSEHVVALVSAGETYKGEDLVC---YSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VACG H A+V T + ++WG + +LG GD+E+RL P + +
Sbjct: 241 VACGVWHTAAIVEVIVTQSSATVSAGKLFTWGDGDKHRLGHGDKEARLNPTCVASLID-- 298
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ Y V CG T LT WT G GQLG+ + P V +
Sbjct: 299 -YDFYRVACGHSLTVGLT--------TSGKVWTMGNSVYGQLGNPNSDGR--PCLVGDKI 347
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+++ V CG +H SV++S +V++WG KG N L + D P L+
Sbjct: 348 TNEHVLQVACGSYHVSVLTSRSEVFTWG--KG----ANGRLGHGDIEDQKVPTLVE---- 397
Query: 309 HGPKFQDPVQVACGAAHTVLV 329
K + +ACGA T +
Sbjct: 398 -ALKDRSVRHIACGANFTAAI 417
>gi|357165462|ref|XP_003580391.1| PREDICTED: uncharacterized protein LOC100842512 [Brachypodium
distachyon]
Length = 1023
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/307 (26%), Positives = 134/307 (43%), Gaps = 52/307 (16%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG--FSLVSSFTPSPVWDFH-- 125
A + + +V G + A+ +G L W +EG L+S++ W H
Sbjct: 312 ASVHVKAVAFGSKHTCAVTVSGELLEW---------SEGAHRLGLLSNWYERNQWSPHKL 362
Query: 126 -----GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
+V K+ACG H + S+G+ +++G G LG GD++ RPK
Sbjct: 363 FGPMDSISVSKIACGEWHTAIITSSGQ--------LFTYGDGTFGVLGHGDKQGIARPKE 414
Query: 181 IETFNQDSPWAVYEVTCGSFHTALLTHR------KRPNDMLESMCWTFGLGENGQLGHGT 234
+E+ V V CG +HTA + P+ L +T+G + G+LGH
Sbjct: 415 VESLK---GLRVKSVACGPWHTAAVVEVTSSFNCNAPSGKL----FTWGDADRGKLGHAD 467
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEA 294
+ LVP V L Y +L V CG T V++S G V++ G K L N
Sbjct: 468 KKIKLVPTCVDLLTSYDFL-QVSCGAALTVVLTSTGVVFTIGSSKHGQL-------GNPH 519
Query: 295 GDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
D S + G K + +++ G++H ++T G ++++WG+G G LG G +
Sbjct: 520 ADGESICTVEGT----LKNEFVREISSGSSHVAVLTLKG-QVFTWGKGADGQLGLGDYDN 574
Query: 355 FFAPAIV 361
+P +V
Sbjct: 575 RSSPTLV 581
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 56/244 (22%), Positives = 97/244 (39%), Gaps = 41/244 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG H + GE + SWG ++ LG +S PK++E +
Sbjct: 264 VQSIACGENHAAIVTKLGEVF--------SWGNESSRTLGHQINDSVSCPKLVEAL---A 312
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V V GS HT +T ++LE W+ G G L + ++ P ++
Sbjct: 313 SVHVKAVAFGSKHTCAVT---VSGELLE---WSEGAHRLGLLSNWYERNQWSPHKLFGPM 366
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSW--GMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + + CG +HT++++S+G ++++ G LG + R + +++ + +
Sbjct: 367 DSISVSKIACGEWHTAIITSSGQLFTYGDGTFGVLGHGDKQGIARPKEVESLKGLRVKS- 425
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD---------DGYKLWSWGRGRSGVLGTGKTIDFFA 357
VACG HT V + KL++WG G LG
Sbjct: 426 ------------VACGPWHTAAVVEVTSSFNCNAPSGKLFTWGDADRGKLGHADKKIKLV 473
Query: 358 PAIV 361
P V
Sbjct: 474 PTCV 477
Score = 47.4 bits (111), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 78/177 (44%), Gaps = 23/177 (12%)
Query: 90 AGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETY 149
+G L+ WG+ D G P+ V + ++V+CG+ V L S G
Sbjct: 449 SGKLFTWGDA---DRGKLGHADKKIKLVPTCVDLLTSYDFLQVSCGAALTVVLTSTG--- 502
Query: 150 KGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRK 209
V ++ G++ +GQLG + + T + V E++ GS H A+LT
Sbjct: 503 -----VVFTIGSSKHGQLGNPHADGESICTVEGTLKNE---FVREISSGSSHVAVLT--- 551
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVV 266
L+ +T+G G +GQLG G + P V+ L Q ++ S+ CG ++ V
Sbjct: 552 -----LKGQVFTWGKGADGQLGLGDYDNRSSPTLVEAL-QGRHVQSIACGSNFSAAV 602
Score = 44.3 bits (103), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 12/81 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +++ GS HV L T KG+ ++WG +GQLGLGD ++R P ++E
Sbjct: 537 VREISSGSSHVAVL-----TLKGQ---VFTWGKGADGQLGLGDYDNRSSPTLVEALQGRH 588
Query: 189 PWAVYEVTCGS-FHTALLTHR 208
V + CGS F A+ H+
Sbjct: 589 ---VQSIACGSNFSAAVCLHK 606
>gi|348684000|gb|EGZ23815.1| hypothetical protein PHYSODRAFT_449139 [Phytophthora sojae]
Length = 539
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/296 (27%), Positives = 122/296 (41%), Gaps = 51/296 (17%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV--WDFHGHTVVKVACGSEHVVA 141
S+AI G WGN D G S +TP + G V +ACG H +A
Sbjct: 222 SIAITAKGEAMAWGN---GDKYRLGHGSSSKEYTPRTIEFLSLKGR-VRDLACGLGHTLA 277
Query: 142 LVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFH 201
L+ +GE Y +WG +NG+LGLGD R P +P + CG+ H
Sbjct: 278 LIESGELY--------AWGNGSNGRLGLGDTNDRSSP-TRSNGASIAPVRFRHIFCGASH 328
Query: 202 TALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ------YVYLVS 255
+ L+ R + +G GQ GHG T ++++ ++V
Sbjct: 329 SLGLSWDGRA--------YAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVY 380
Query: 256 VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK--- 312
G HT +++G V+S G C R I P+L G+ K
Sbjct: 381 AAGGWEHTLFCTASGRVYSCG-------CGYKDSRRA----GIPPVLGHGDCDRRLKPTS 429
Query: 313 -------FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++ V+VACG H++ VT +G ++++WG G +G LG G F P +V
Sbjct: 430 VQALDDTHEEVVKVACGWDHSLAVTANG-RVYTWGSGANGKLGHGDEESFDIPTLV 484
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 113/280 (40%), Gaps = 38/280 (13%)
Query: 84 SLAIDNAGALWMWGNCP-----LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+LA+ +G L+ WGN L D++ + + + +PV H + CG+ H
Sbjct: 275 TLALIESGELYAWGNGSNGRLGLGDTNDRSSPTRSNGASIAPVRFRH------IFCGASH 328
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP-----WAVY 193
+ L G Y +WG NN GQ G G + + IE+F + VY
Sbjct: 329 SLGLSWDGRAY--------AWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEEEEFVVY 380
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ-YVY 252
G HT T R + G LGHG L P V+ L +
Sbjct: 381 AAG-GWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQALDDTHEE 439
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
+V V CG H+ V++ G V++WG N L + P L+ G K
Sbjct: 440 VVKVACGWDHSLAVTANGRVYTWGSG------ANGKLGHGDEESFDIPTLV--RCMDGKK 491
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+D G HTV +T D ++LW+ G+G SG LG G +
Sbjct: 492 VKD---AKAGCEHTVFLTYD-HELWTCGQGDSGRLGHGDS 527
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 60/117 (51%), Gaps = 19/117 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VVKVACG +H +A+ + G Y +WG+ NG+LG GD ES P ++ +
Sbjct: 440 VVKVACGWDHSLAVTANGRVY--------TWGSGANGKLGHGDEESFDIPTLVRCMDGKK 491
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V + G HT LT+ + WT G G++G+LGHG +Q+ P +++
Sbjct: 492 ---VKDAKAGCEHTVFLTY--------DHELWTCGQGDSGRLGHGDSQTRKRPTKIE 537
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 72/152 (47%), Gaps = 12/152 (7%)
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+L TH E+M W G G+ +LGHG++ P ++ L + + CGL H
Sbjct: 217 SLSTHSIAITAKGEAMAW--GNGDKYRLGHGSSSKEYTPRTIEFLSLKGRVRDLACGLGH 274
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACG 322
T + +G++++WG N L + D SP +G +F+ + CG
Sbjct: 275 TLALIESGELYAWGNGS------NGRLGLGDTNDRSSPTRSNGASIAPVRFR---HIFCG 325
Query: 323 AAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
A+H++ ++ DG + ++WG+ G G G T D
Sbjct: 326 ASHSLGLSWDG-RAYAWGKNNQGQCGHGHTND 356
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 93/229 (40%), Gaps = 16/229 (6%)
Query: 70 APIKICSVKAGGMMSLAIDNAGALWMW-----GNCPLPDSSTEGGFSLVSSFTPSPVWDF 124
AP++ + G SL + G + W G C ++ + + SF + +
Sbjct: 315 APVRFRHIFCGASHSLGLSWDGRAYAWGKNNQGQCGHGHTNDQWTIQEIESFRDTEEGEE 374
Query: 125 HGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
VV A G EH + ++G Y S A LG GD + RL+P ++
Sbjct: 375 EEF-VVYAAGGWEHTLFCTASGRVYSCGCGYKDSRRAGIPPVLGHGDCDRRLKPTSVQAL 433
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ D+ V +V CG H+ +T R +T+G G NG+LGHG +S +P V
Sbjct: 434 D-DTHEEVVKVACGWDHSLAVTANGR--------VYTWGSGANGKLGHGDEESFDIPTLV 484
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+ + + G HT ++ ++W+ G L S TR
Sbjct: 485 RCMDGK-KVKDAKAGCEHTVFLTYDHELWTCGQGDSGRLGHGDSQTRKR 532
Score = 47.8 bits (112), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 71/149 (47%), Gaps = 23/149 (15%)
Query: 221 TFGLGENGQLGHGT-----------TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+FG G++G+LGHG T++ +VP + + V +D H+ +++
Sbjct: 170 SFGKGDHGKLGHGQCSHVSCQEGNCTENKMVPTMIAA-TRDVLFRKIDSLSTHSIAITAK 228
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G+ +WG L + S ++ I + + G + +D +ACG HT+ +
Sbjct: 229 GEAMAWGNGDKYRL-GHGSSSKEYTPRTIEFLSLKG------RVRD---LACGLGHTLAL 278
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ G +L++WG G +G LG G T D +P
Sbjct: 279 IESG-ELYAWGNGSNGRLGLGDTNDRSSP 306
Score = 40.8 bits (94), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 51/113 (45%), Gaps = 13/113 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
++ V G SLA+ G ++ WG+ ++ + G SF P+ V G V
Sbjct: 439 EVVKVACGWDHSLAVTANGRVYTWGS----GANGKLGHGDEESFDIPTLVRCMDGKKVKD 494
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
G EH V L TY E C G ++G+LG GD ++R RP IE F
Sbjct: 495 AKAGCEHTVFL-----TYDHELWTC---GQGDSGRLGHGDSQTRKRPTKIELF 539
>gi|302803630|ref|XP_002983568.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
gi|300148811|gb|EFJ15469.1| hypothetical protein SELMODRAFT_118244 [Selaginella moellendorffii]
Length = 413
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 94/357 (26%), Positives = 143/357 (40%), Gaps = 104/357 (29%)
Query: 75 CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHG--HTVVKV 132
CSV GG +L + + G ++ G +SS + G L S + PV + HG V +
Sbjct: 64 CSVSCGGAHTLILTDKGRVFATG----LNSSGQLGVPLKSESSFDPV-EVHGFPDPCVHI 118
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR--LRPKIIETF------ 184
A G H A+ S+GETY WG N+ GQLGLG R + P+ +E+
Sbjct: 119 AAGRYHSAAITSSGETYV--------WGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLK 170
Query: 185 ---------------NQDSPWAVYEVTC-------GSF--------HTALLTH------- 207
Q W C G F +T + H
Sbjct: 171 ALALGTDHSLGLAETGQVLSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQV 230
Query: 208 RKRPNDMLESMC-------WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
R ++ S C ++FG G QLG G A P + +LP+ + S+ CG
Sbjct: 231 RSVSAGLVHSACADDSGTIYSFGQGSMCQLGLGNNNDASQPCPIPDLPR---VSSISCGG 287
Query: 261 FHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP 316
+HT ++ GD+++WG + G G ++ R E +++ +S
Sbjct: 288 YHTGAITQDGDIYTWGSNEHGCLGSGFRASSKPLRLE---SLAEAFMS------------ 332
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRS------------GVLGTGKTIDFFAPAIV 361
+++CG HT ++ DGY ++SWG G S G LG G DFF P +
Sbjct: 333 -EISCGWKHTAAIS-DGY-IFSWGWGGSYGTYATQAESSGGQLGVGTDFDFFEPVPI 386
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/201 (26%), Positives = 88/201 (43%), Gaps = 28/201 (13%)
Query: 159 WGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESM 218
WG + G+LGL + S+ P + P + V+CG HT +LT + R
Sbjct: 33 WGNGDQGRLGLSESGSQFEPVLCRALESHEPCS---VSCGGAHTLILTDKGR-------- 81
Query: 219 CWTFGLGENGQLGHG-TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
+ GL +GQLG ++S+ P +V P V + G +H++ ++S+G+ + WG
Sbjct: 82 VFATGLNSSGQLGVPLKSESSFDPVEVHGFPDPC--VHIAAGRYHSAAITSSGETYVWGR 139
Query: 278 --EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
E LGL G + I+ +A G H++ + + G +
Sbjct: 140 NSEGQLGL-----------GKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETG-Q 187
Query: 336 LWSWGRGRSGVLGTGKTIDFF 356
+ SWG R G LG G+ FF
Sbjct: 188 VLSWGTNRFGCLGHGEMTGFF 208
Score = 52.4 bits (124), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 76/319 (23%), Positives = 113/319 (35%), Gaps = 86/319 (26%)
Query: 89 NAGALW--MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
AG W +WGN D G S F P H V+CG H + L G
Sbjct: 24 KAGKRWVALWGN---GDQGRLGLSESGSQFEPVLCRALESHEPCSVSCGGAHTLILTDKG 80
Query: 147 ETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
++ G N++GQLG+ ES P + F P + G +H+A +
Sbjct: 81 RV--------FATGLNSSGQLGVPLKSESSFDPVEVHGF----PDPCVHIAAGRYHSAAI 128
Query: 206 THR-----------------KRPNDM------LESMC------------WTFGLGENGQ- 229
T KR + +ES+ + GL E GQ
Sbjct: 129 TSSGETYVWGRNSEGQLGLGKRAKSVYITPQKMESLAGMRLKALALGTDHSLGLAETGQV 188
Query: 230 ----------LGHG--TTQSALVPEQVKELPQYVYLV------SVDCGLFHTSVVSSAGD 271
LGHG T + + P+ ++ + SV GL H++ +G
Sbjct: 189 LSWGTNRFGCLGHGEMTGFFDFFKDTNEYTPRIIHCLEKLQVRSVSAGLVHSACADDSGT 248
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
++S+G +C L DA P I P ++CG HT +T
Sbjct: 249 IYSFGQGS---MC---QLGLGNNNDASQPCPI-------PDLPRVSSISCGGYHTGAITQ 295
Query: 332 DGYKLWSWGRGRSGVLGTG 350
DG +++WG G LG+G
Sbjct: 296 DG-DIYTWGSNEHGCLGSG 313
>gi|444911573|ref|ZP_21231747.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
gi|444717927|gb|ELW58746.1| BNR repeat domain protein [Cystobacter fuscus DSM 2262]
Length = 708
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 91/345 (26%), Positives = 132/345 (38%), Gaps = 78/345 (22%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D + + + P+++ +V AGG SLA+ + G +W WGN S G S
Sbjct: 42 LGDGTTSLRRVPVRVLGLSGVVTVAAGGGHSLAVHSDGTVWAWGNN---SSGQLGDGSFD 98
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
+ P V G VV VA G H +A+ + D ++WG N++GQLG G +
Sbjct: 99 NRAEPVRVRGLSG--VVAVAAGGYHSLAVSA--------DGTVWAWGNNSSGQLGDGSFD 148
Query: 174 SRLRPKIIET---------------------------------------FNQDSPWAVYE 194
+R P + FN P V
Sbjct: 149 NRAEPVRVRGSSGVVAVAAGGAHSLAVRSDGILWAWGDNLYGQLGNRGEFNSSEPVQVLR 208
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYL 253
VT G +A H + + W +G +GQLG T L +P +V E+ V +
Sbjct: 209 VTGGVTVSAGANHSLAVS--ADGTVWAWGDNSHGQLGIARTTPLLSIPGRVPEVRGSVAM 266
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
+ D H+ V G VW+WG G G N + N P + P
Sbjct: 267 AAGDN---HSLAVRDDGTVWAWG-SNGHGQLGNGFMVDNS-----EPGRV-------PGL 310
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ VA G+ H++ V DDG +W+WG G G G T AP
Sbjct: 311 EGVGAVAAGSNHSLAVRDDG-TVWAWGSNVEGQRGDGTTGQLSAP 354
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 112/278 (40%), Gaps = 51/278 (18%)
Query: 84 SLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVV 140
SLA+ G+ W WG+ L D ST +P+PV VV VA GS H +
Sbjct: 373 SLAVSADGSAWAWGHNSHGELGDGSTR--------NSPAPVRVDGLKEVVAVAAGSSHSL 424
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSF 200
AL++ D +WG N GQLG G R S P + V V GS
Sbjct: 425 ALLA--------DGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLR-----GVVAVAAGSS 471
Query: 201 HTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGL 260
H+ L + + WT+G NGQLG GTT P VK L +V+V G
Sbjct: 472 HSLAL--------LADGTVWTWGYNLNGQLGDGTTTYRYEPVAVKGLEG---VVAVAAGG 520
Query: 261 FHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
H+ V S G W+WG E G + +LT A P+ + Q
Sbjct: 521 NHSLAVRSDGTAWAWG-ENVKGQLGDGTLTSRPA-----PVEVKAAAKAVAAAQ------ 568
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
++ V DG+ W+WG SG LG G T P
Sbjct: 569 ---GLSLAVGSDGFP-WAWGNNSSGQLGDGSTTSRPMP 602
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 91/330 (27%), Positives = 132/330 (40%), Gaps = 71/330 (21%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV 113
L D S N AP+++ +V AG SLA+ G + WG+ G +
Sbjct: 393 LGDGSTRNSPAPVRVDGLKEVVAVAAGSSHSLALLADGTVLAWGDNTF---GQLGDGTRA 449
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S P+ V G VV VA GS H +AL++ D ++WG N NGQLG G
Sbjct: 450 SHSVPAQVRGLRG--VVAVAAGSSHSLALLA--------DGTVWTWGYNLNGQLGDGTTT 499
Query: 174 SRLRPKIIETF-----------------NQDSPWAVYEVTCGSFHTALLTHRKRPNDML- 215
R P ++ + + WA E G LT R P ++
Sbjct: 500 YRYEPVAVKGLEGVVAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAPVEVKA 559
Query: 216 -----------------ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDC 258
+ W +G +GQLG G+T S +P +V+ + +V+V
Sbjct: 560 AAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGE---VVAVAA 616
Query: 259 GLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
G H+ +S G VW+WG + G +L R ++P + G V
Sbjct: 617 GNGHSLALSPEGGVWAWG-QNARGQLGEGTLDRR-----LAPTRVQG-------LSGVVA 663
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
VA G A ++ V DDG +WSWG G LG
Sbjct: 664 VAAGGAFSLAVRDDG-SVWSWGDNAFGQLG 692
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 118/287 (41%), Gaps = 47/287 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSFTPSPVWDFHGHTVVK 131
+ +V AG SLA+ + G +W WG S+ EG G + +P VV
Sbjct: 313 VGAVAAGSNHSLAVRDDGTVWAWG------SNVEGQRGDGTTGQLS-APTRVPGVSGVVG 365
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA H +A+ + G ++WG N++G+LG G + P ++ +
Sbjct: 366 VAANVFHSLAVSADGS--------AWAWGHNSHGELGDGSTRNSPAPVRVDGLKE----- 412
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V V GS H+ L + + +G GQLG GT S VP QV+ L
Sbjct: 413 VVAVAAGSSHSLAL--------LADGTVLAWGDNTFGQLGDGTRASHSVPAQVRGLRG-- 462
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+V+V G H+ + + G VW+WG L + R E P+ + G
Sbjct: 463 -VVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTTTYRYE------PVAVKG------ 509
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ V VA G H++ V DG W+WG G LG G AP
Sbjct: 510 -LEGVVAVAAGGNHSLAVRSDGTA-WAWGENVKGQLGDGTLTSRPAP 554
Score = 62.0 bits (149), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 72/277 (25%), Positives = 102/277 (36%), Gaps = 74/277 (26%)
Query: 60 LEDDSKTNHKAPIKI------CSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGF 110
L D ++ +H P ++ +V AG SLA+ G +W WG N L D +T
Sbjct: 443 LGDGTRASHSVPAQVRGLRGVVAVAAGSSHSLALLADGTVWTWGYNLNGQLGDGTT---- 498
Query: 111 SLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK-------------------- 150
+ P V G VV VA G H +A+ S G +
Sbjct: 499 --TYRYEPVAVKGLEG--VVAVAAGGNHSLAVRSDGTAWAWGENVKGQLGDGTLTSRPAP 554
Query: 151 --------------------GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
G D ++WG N++GQLG G SR P ++ +
Sbjct: 555 VEVKAAAKAVAAAQGLSLAVGSDGFPWAWGNNSSGQLGDGSTTSRPMPMRVQGAGE---- 610
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V V G+ H+ L+ E W +G GQLG GT L P +V+ L
Sbjct: 611 -VVAVAAGNGHSLALSP--------EGGVWAWGQNARGQLGEGTLDRRLAPTRVQGLSGV 661
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
V + + + V G VWSWG + G NA
Sbjct: 662 VAVAAGGA---FSLAVRDDGSVWSWG-DNAFGQLGNA 694
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 95/233 (40%), Gaps = 38/233 (16%)
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
++A G H +++ +D ++ G N+ GQLG G R P + +
Sbjct: 13 ARIATGGSHSLSVH--------QDGTVWAVGGNSVGQLGDGTTSLRRVPVRVLGLS---- 60
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V G H+ L H + W +G +GQLG G+ + P +V+ L
Sbjct: 61 -GVVTVAAGGGHS-LAVHS-------DGTVWAWGNNSSGQLGDGSFDNRAEPVRVRGLSG 111
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPH 309
+V+V G +H+ VS+ G VW+WG L + R E P+ +
Sbjct: 112 ---VVAVAAGGYHSLAVSADGTVWAWGNNSSGQLGDGSFDNRAE------PVRVR----- 157
Query: 310 GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
V VA G AH++ V DG LW+WG G LG + P VL
Sbjct: 158 --GSSGVVAVAAGGAHSLAVRSDGI-LWAWGDNLYGQLGNRGEFNSSEPVQVL 207
>gi|383319150|ref|YP_005379991.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
gi|379320520|gb|AFC99472.1| Alpha-tubulin suppressor and related RCC1 domain-containing protein
[Methanocella conradii HZ254]
Length = 461
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 119/288 (41%), Gaps = 50/288 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT-VVKV 132
+ S+ AG LA+ + G++ WGN D G + VS+ TP G T VV +
Sbjct: 28 VISISAGASHCLALTSDGSVLAWGNN---DHGQLGDGTTVSASTPVKA---KGLTHVVAI 81
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
A G+ H +AL +D ++WG N NG LG G E RL P + V
Sbjct: 82 AAGASHSLAL--------KDDGTVWAWGDNYNGNLGDGTTEDRLTPVQVVGLTN-----V 128
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
++ G ++T +D W +G G LG GT + L P Q K +P V
Sbjct: 129 KAISAG-----IMTSFALKDD---GTLWAWGANSRGDLGDGTLEDRLTPVQAK-VPAKV- 178
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP- 311
V G T V+ GDVW+WG + D+I +L G P
Sbjct: 179 ---VKIGHKGTFAVTDDGDVWAWGNNVIIVF----------GNDSICGMLGDNYGQVRPT 225
Query: 312 --KFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+ + P ++ G H V + DDG +W+WG G LG ID
Sbjct: 226 PFRVEQPSSVKEITNGLEHVVFIKDDG-TVWTWGLNDKGQLGNNAKID 272
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 89/222 (40%), Gaps = 42/222 (18%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V+ ++ G+ H +AL S G +WG N++GQLG G S P +
Sbjct: 27 SVISISAGASHCLALTSDGS--------VLAWGNNDHGQLGDGTTVSASTPVKAKGLTH- 77
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V + G+ H+ L + W +G NG LG GTT+ L P QV L
Sbjct: 78 ----VVAIAAGASHSLALKD--------DGTVWAWGDNYNGNLGDGTTEDRLTPVQVVGL 125
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ ++ G+ + + G +W+WG L D ++P+
Sbjct: 126 TN---VKAISAGIMTSFALKDDGTLWAWGANS------RGDLGDGTLEDRLTPV------ 170
Query: 308 PHGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ + P +V G T VTDDG +W+WG V G
Sbjct: 171 ----QAKVPAKVVKIGHKGTFAVTDDG-DVWAWGNNVIIVFG 207
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 123/305 (40%), Gaps = 52/305 (17%)
Query: 59 SLEDDSKTNHKAPIKIC------SVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGG 109
+L D + + P+++ ++ AG M S A+ + G LW WG L D + E
Sbjct: 107 NLGDGTTEDRLTPVQVVGLTNVKAISAGIMTSFALKDDGTLWAWGANSRGDLGDGTLEDR 166
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG- 168
+ V + P+ V V G + A+ G+ + + V +G N+ G
Sbjct: 167 LTPVQAKVPAKV----------VKIGHKGTFAVTDDGDVWAWGNNVIIVFG--NDSICGM 214
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
LGD ++RP F + P +V E+T G H + + WT+GL + G
Sbjct: 215 LGDNYGQVRP---TPFRVEQPSSVKEITNGLEHVVFIKD--------DGTVWTWGLNDKG 263
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVS----VDCGLFHTSVVSSAGDVWSWGMEKGLGLC 284
QLG+ + + + V P ++ V G +++ + G VW WG +
Sbjct: 264 QLGN---NAKIDDKTVTTTPVKALGINNVKDVSAGYYYSLALKDDGSVWKWGED--YYTI 318
Query: 285 PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
PN ++ A P I G + ++ G + + +DG +W WG +
Sbjct: 319 PNMLGVYSKLVSA--PEQIGG-------LSGIIAISSGNYFYIALKNDG-SVWGWGYNEN 368
Query: 345 GVLGT 349
G LG+
Sbjct: 369 GQLGS 373
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 72/168 (42%), Gaps = 25/168 (14%)
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+V ++ G+ H LT + +G ++GQLG GTT SA P + K L
Sbjct: 27 SVISISAGASHCLALTS--------DGSVLAWGNNDHGQLGDGTTVSASTPVKAKGL--- 75
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++V++ G H+ + G VW+WG N +L D ++P+ + G
Sbjct: 76 THVVAIAAGASHSLALKDDGTVWAWGDNY------NGNLGDGTTEDRLTPVQVVG----- 124
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
+ ++ G + + DDG LW+WG G LG G D P
Sbjct: 125 --LTNVKAISAGIMTSFALKDDG-TLWAWGANSRGDLGDGTLEDRLTP 169
Score = 44.7 bits (104), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 76/194 (39%), Gaps = 21/194 (10%)
Query: 239 LVPEQVKELPQYVY---LVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
LV Q P Y ++S+ G H ++S G V +WG N+ G
Sbjct: 11 LVMLQALAAPCYASSPSVISISAGASHCLALTSDGSVLAWG--------------NNDHG 56
Query: 296 DAISPILISGNGPHGPK-FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
+S + P K V +A GA+H++ + DDG +W+WG +G LG G T D
Sbjct: 57 QLGDGTTVSASTPVKAKGLTHVVAIAAGASHSLALKDDG-TVWAWGDNYNGNLGDGTTED 115
Query: 355 FFAPAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAMEEMKLLQSKLS 414
P V+ + + + L D+ T GA R + L E +L +
Sbjct: 116 RLTPVQVVGLTNVKAISAGIMTSFALKDD-GTLWAWGANSRGD-LGDGTLEDRLTPVQAK 173
Query: 415 VMERYASILHGSIF 428
V + I H F
Sbjct: 174 VPAKVVKIGHKGTF 187
Score = 41.6 bits (96), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 95/242 (39%), Gaps = 37/242 (15%)
Query: 59 SLEDD-SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLV---- 113
+LED + K P K+ VK G + A+ + G +W WGN + + ++
Sbjct: 162 TLEDRLTPVQAKVPAKV--VKIGHKGTFAVTDDGDVWAWGNNVIIVFGNDSICGMLGDNY 219
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG----L 169
P+P +V ++ G EHVV + +D ++WG N+ GQLG +
Sbjct: 220 GQVRPTPFRVEQPSSVKEITNGLEHVV--------FIKDDGTVWTWGLNDKGQLGNNAKI 271
Query: 170 GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQ 229
D+ P N V +V+ G +++ L + W +G
Sbjct: 272 DDKTVTTTPVKALGINN-----VKDVSAGYYYSLALKD--------DGSVWKWGEDYYTI 318
Query: 230 LGHGTTQSALV--PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNA 287
S LV PEQ+ L ++++ G + + + G VW WG + L +A
Sbjct: 319 PNMLGVYSKLVSAPEQIGGLSG---IIAISSGNYFYIALKNDGSVWGWGYNENGQLGSHA 375
Query: 288 SL 289
S
Sbjct: 376 SF 377
>gi|117558047|gb|AAI27373.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 967
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG+ + G S + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFSWGHA----VYGQIGLSTAEEYIRVPRNIKSLSDVQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
VACG H +AL +D +SWG N GQLGLG + + P+ I++ + P+
Sbjct: 142 VACGHHHSLAL--------SKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLS-GIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A + G H+ LT + + +G + GQLG VP +K L +
Sbjct: 193 A--HIAAGGGHSFALT--------ISGAIFGWGRNKFGQLGLTDETDRNVPALLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++ + CG HT+ ++ G V+++G G G L N ++P +
Sbjct: 242 QKIIHICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTNHEVNPRKV------- 288
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
F+ Q+ACG HT+ +++S+G G +G LGTG TI+ +P V L
Sbjct: 289 --FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWL 346
Query: 367 TEE 369
T E
Sbjct: 347 TYE 349
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 108/271 (39%), Gaps = 43/271 (15%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CGS H V ++ G
Sbjct: 4 WGNTSFGQLGL-GGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHDKSRRKPEQVGALDAQ---IIVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W G GQ+G T + + VP +K L V +V V CG H+ +S D++S
Sbjct: 104 QVFSW--GHAVYGQIGLSTAEEYIRVPRNIKSLSD-VQIVQVACGHHHSLALSKDSDIFS 160
Query: 275 WGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
WG + GLGL E +P I G F +A G H+ +T
Sbjct: 161 WGQNQYGQLGLGL---------EIKKECAPRHIKSLS--GIPF---AHIAAGGGHSFALT 206
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++ WGR + G LG D PA++
Sbjct: 207 ISG-AIFGWGRNKFGQLGLTDETDRNVPALL 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + AGG S A+ +GA++ WG G P+ + ++
Sbjct: 190 IPFAHIAAGGGHSFALTISGAIFGWGRNKF---GQLGLTDETDRNVPALLKSLRSQKIIH 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPW 190
+ CG +H AL G +++GA GQLG + P K+ E
Sbjct: 247 ICCGEDHTAALTKEGGV--------FTFGAGGYGQLGHNSTNHEVNPRKVFELMGS---- 294
Query: 191 AVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT A + R ++FGLG NGQLG G+T + P VK
Sbjct: 295 IVTQIACGRQHTLAFVPSSGR--------IYSFGLGGNGQLGTGSTINRKSPFTVK 342
>gi|449280347|gb|EMC87674.1| RCC1 and BTB domain-containing protein 2, partial [Columba livia]
Length = 531
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/312 (26%), Positives = 129/312 (41%), Gaps = 52/312 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVV 130
I S +G + LA + G ++ WG+ S G + F P V + V+
Sbjct: 81 IACLSYGSGPHVVLATEE-GEVYTWGHNAY---SQLGNGTTNHGFVPCQVSTNLVNKKVI 136
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACGS H + L S GE Y+WG NN+GQ+G G ++ P+ + + Q+
Sbjct: 137 EVACGSHHSMVLTSDGEV--------YTWGYNNSGQVGSGSTANQPIPRRVTSCLQNK-- 186
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
V + CG + + + +G NGQLG G++ + P ++ L Q
Sbjct: 187 IVVNIACGQMCSMAVVENGE--------VYVWGYNGNGQLGLGSSGNQPTPCRIAAL-QG 237
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGN 306
+ + V CG HT V++ G +++WG + G G N S D I I+
Sbjct: 238 IRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYPTTVVVDKDRVIEIA-- 295
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFA 357
AC +AHT +++ WG RG+S +L T FA
Sbjct: 296 -------------ACHSAHTSAAKTQSGQVYMWGQCRGQSVILPHLTHFACTDDVFACFA 342
Query: 358 PAIVLWPPLTEE 369
V+W L+ E
Sbjct: 343 TPAVMWRLLSVE 354
Score = 75.1 bits (183), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 111/262 (42%), Gaps = 65/262 (24%)
Query: 149 YKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
Y E+ + G N +G LG GD +S + P+ +++ CG A L++
Sbjct: 41 YATENDEVFVLGMNCSGCLGTGDMQSTIEPRRLDSL------------CGK-KIACLSYG 87
Query: 209 KRPNDML---ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
P+ +L E +T+G QLG+GTT VP QV ++ V CG H+ V
Sbjct: 88 SGPHVVLATEEGEVYTWGHNAYSQLGNGTTNHGFVPCQVSTNLVNKKVIEVACGSHHSMV 147
Query: 266 VSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILI------------------ 303
++S G+V++WG + G G N + R + I++
Sbjct: 148 LTSDGEVYTWGYNNSGQVGSGSTANQPIPRRVTSCLQNKIVVNIACGQMCSMAVVENGEV 207
Query: 304 ---------------SGNGP--------HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG 340
SGN P G + Q +VACG AHT+++TD+G ++++WG
Sbjct: 208 YVWGYNGNGQLGLGSSGNQPTPCRIAALQGIRVQ---RVACGYAHTLVLTDEG-QIYAWG 263
Query: 341 RGRSGVLGTGKTIDFFAPAIVL 362
G LGTG + P V+
Sbjct: 264 ANSYGQLGTGNKSNQSYPTTVV 285
>gi|191961780|ref|NP_001122122.1| HECT and RLD domain containing E3 ubiquitin protein ligase 4
[Xenopus (Silurana) tropicalis]
gi|189441713|gb|AAI67508.1| LOC100036667 protein [Xenopus (Silurana) tropicalis]
Length = 1049
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 81/303 (26%), Positives = 134/303 (44%), Gaps = 46/303 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF--TPSPVWDFHGHTVVK 131
I +V G +LA+++ G ++ WG+ + G S + P + +V+
Sbjct: 86 IVAVSCGEAHTLALNDKGQVFSWGHA----VYGQIGLSTAEEYIRVPRNIKSLSDVQIVQ 141
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDSPW 190
VACG H +AL +D +SWG N GQLGLG + + P+ I++ + P+
Sbjct: 142 VACGHHHSLAL--------SKDSDIFSWGQNQYGQLGLGLEIKKECAPRHIKSLS-GIPF 192
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
A + G H+ LT + + +G + GQLG VP +K L +
Sbjct: 193 A--HIAAGGGHSFALT--------ISGAIFGWGRNKFGQLGLTDETDRNVPALLKSL-RS 241
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
++ + CG HT+ ++ G V+++G G G L N ++P +
Sbjct: 242 QKIIHICCGEDHTAALTKEGGVFTFG-AGGYG-----QLGHNSTNHEVNPRKV------- 288
Query: 311 PKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
F+ Q+ACG HT+ +++S+G G +G LGTG TI+ +P V L
Sbjct: 289 --FELMGSIVTQIACGRQHTLAFVPSSGRIYSFGLGGNGQLGTGSTINRKSPFTVKGNWL 346
Query: 367 TEE 369
T E
Sbjct: 347 TYE 349
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 108/271 (39%), Gaps = 43/271 (15%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WGN GG P F V V CGS H V ++ G
Sbjct: 4 WGNTSFGQLGL-GGIDEEVVLEPRRCDFFINKNVRDVGCGSRHTVFVLDDG--------T 54
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G N+ GQ LG +SR +P+ + + + V+CG HT L ND
Sbjct: 55 VYTCGCNDLGQ--LGHDKSRRKPEQVGALDAQ---IIVAVSCGEAHTLAL------NDKG 103
Query: 216 ESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWS 274
+ W G GQ+G T + + VP +K L V +V V CG H+ +S D++S
Sbjct: 104 QVFSW--GHAVYGQIGLSTAEEYIRVPRNIKSLSD-VQIVQVACGHHHSLALSKDSDIFS 160
Query: 275 WGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVT 330
WG + GLGL E +P I G F +A G H+ +T
Sbjct: 161 WGQNQYGQLGLGL---------EIKKECAPRHIKSLS--GIPF---AHIAAGGGHSFALT 206
Query: 331 DDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G ++ WGR + G LG D PA++
Sbjct: 207 ISG-AIFGWGRNKFGQLGLTDETDRNVPALL 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + AGG S A+ +GA++ WG G P+ + ++
Sbjct: 190 IPFAHIAAGGGHSFALTISGAIFGWGRNKF---GQLGLTDETDRNVPALLKSLRSQKIIH 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP-KIIETFNQDSPW 190
+ CG +H AL G +++GA GQLG + P K+ E
Sbjct: 247 ICCGEDHTAALTKEGGV--------FTFGAGGYGQLGHNSTNHEVNPRKVFELMGS---- 294
Query: 191 AVYEVTCGSFHT-ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT A + R ++FGLG NGQLG G+T + P VK
Sbjct: 295 IVTQIACGRQHTLAFVPSSGR--------IYSFGLGGNGQLGTGSTINRKSPFTVK 342
>gi|356526548|ref|XP_003531879.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Glycine max]
Length = 474
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 106/387 (27%), Positives = 163/387 (42%), Gaps = 84/387 (21%)
Query: 14 FTCFFMPFICYTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPD--SLEDDSKTNHKAP 71
F C C+ + C + + SL T GA D L D ++ K P
Sbjct: 52 FGCPAGTNACWLDVACGREHTAAIASDGSL--------FTWGANDFGQLGDGTEERRKHP 103
Query: 72 IKIC--------SVKAGGMMSLAI----DNAGA-----LWMWGNCPLPDSSTEGGFSLVS 114
K+ SV G S I +N G+ LW+WG +G
Sbjct: 104 EKVKQLESEFVKSVSCGAHCSACIAEPRENDGSISTRRLWVWGQ-------NQG------ 150
Query: 115 SFTPSPVWD-FHGHTVVK-VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S P W F +T+++ V+CG+ HVVAL G + +WG N GQLG G
Sbjct: 151 SNLPRLFWGAFKPNTIIREVSCGAVHVVALSDEG--------LLQAWGYNECGQLGRGVT 202
Query: 173 ESRLR-PKIIETFNQ---DSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
L+ II ++ + ++P V +V+CG +HTA ++ + +T+GLG
Sbjct: 203 CEGLQGAHIISSYAKFLDEAPELVKIAKVSCGEYHTAAISDKGE--------VYTWGLGN 254
Query: 227 NGQLGHGTTQ---SALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
GQLGH + Q L+P +V L +++ V CG HT ++ G +++WG + L
Sbjct: 255 MGQLGHSSLQYGDKELLPRRVVTLDG-IFIKDVACGGVHTCALTQGGALYTWGGGQSGQL 313
Query: 284 C--PNASLTRNEAGDAIS-----PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
P L A D+ + P+L+ P G + VACG +HT++ DG ++
Sbjct: 314 GLGPQTGLFSCVANDSQTFFRNIPVLVV---PKGVQL-----VACGHSHTLISMSDG-RI 364
Query: 337 WSWGRGRSGVLGTGKTIDFFAPAIVLW 363
WG G K + P+ V W
Sbjct: 365 HGWGYNNYGQAANEKCTYAWYPSPVDW 391
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 47/222 (21%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKII--ETF----NQDSPWAVYEVTCGSFHTALLTHRK 209
Y WG N +GQ G +E +LR PK + E F ++ W +V CG HTA +
Sbjct: 22 YVWGYNQSGQTGRKGKEDQLRIPKQLPPELFGCPAGTNACW--LDVACGREHTAAIAS-- 77
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVS-- 267
+ +T+G + GQLG GT + PE+VK+L + ++ SV CG ++ ++
Sbjct: 78 ------DGSLFTWGANDFGQLGDGTEERRKHPEKVKQL-ESEFVKSVSCGAHCSACIAEP 130
Query: 268 -------SAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVA 320
S +W WG +G ++L R G A P I +V+
Sbjct: 131 RENDGSISTRRLWVWGQNQG------SNLPRLFWG-AFKPNTII------------REVS 171
Query: 321 CGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
CGA H V ++D+G L +WG G LG G T + A ++
Sbjct: 172 CGAVHVVALSDEGL-LQAWGYNECGQLGRGVTCEGLQGAHII 212
>gi|301114615|ref|XP_002999077.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262111171|gb|EEY69223.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 529
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 38/286 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK-VACGSEHVVAL 142
S+AI G WGN D G S +TP + V+ +ACG H +AL
Sbjct: 218 SIAITAKGDAMAWGN---GDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGHTLAL 274
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
+ +GE + +WG +NG+LGLGD R E+ + P + CG+ H+
Sbjct: 275 MESGELF--------AWGNGSNGRLGLGDTNDR-----PESCSTSVPVRFRHIFCGASHS 321
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP---QYVYLVSVDCG 259
L+ R +T+G GQ GHG T ++++ + + G
Sbjct: 322 LGLSWDGRA--------YTWGKNNQGQCGHGHTNDQWTIQEIESFEDGEEAECVTYAAGG 373
Query: 260 LFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQD 315
HT +++G V+S G + G+ P L + + P LI ++
Sbjct: 374 WEHTLFSTASGRVYSCGCGYKDSRRAGIPP--VLGHGDCDRRLKPTLIQ---SLEDAREE 428
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V+VACG H++ V+ G K+++WG G +G LG G F P +V
Sbjct: 429 IVKVACGWDHSLAVSASG-KVYTWGSGTNGKLGHGDEESFDTPTLV 473
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 61/116 (52%), Gaps = 19/116 (16%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+VKVACG +H +A+ ++G+ Y +WG+ NG+LG GD ES P ++ T
Sbjct: 429 IVKVACGWDHSLAVSASGKVY--------TWGSGTNGKLGHGDEESFDTPTLVRTMEGRH 480
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
V + G HT LT+ + W+ G G++G+LGHG +Q+ P ++
Sbjct: 481 ---VKDAKAGCEHTVFLTY--------DHELWSCGQGDSGRLGHGDSQTRKRPTKI 525
Score = 53.1 bits (126), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
+L TH ++M W G G+ +LGHG++ P ++ L + + CGL H
Sbjct: 213 SLSTHSIAITAKGDAMAW--GNGDKYRLGHGSSTKEYTPRMIEHLRLKGRVRDLACGLGH 270
Query: 263 TSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ---V 319
T + +G++++WG N S R GD + + P PV+ +
Sbjct: 271 TLALMESGELFAWG---------NGSNGRLGLGD-------TNDRPESCSTSVPVRFRHI 314
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTID 354
CGA+H++ ++ DG + ++WG+ G G G T D
Sbjct: 315 FCGASHSLGLSWDG-RAYTWGKNNQGQCGHGHTND 348
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 98/245 (40%), Gaps = 19/245 (7%)
Query: 54 IGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMW-----GNCPLPDSSTEG 108
+G D+ + + P++ + G SL + G + W G C ++ +
Sbjct: 291 LGLGDTNDRPESCSTSVPVRFRHIFCGASHSLGLSWDGRAYTWGKNNQGQCGHGHTNDQW 350
Query: 109 GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG 168
+ SF V A G EH + ++G Y S A LG
Sbjct: 351 TIQEIESFEDGE----EAECVTYAAGGWEHTLFSTASGRVYSCGCGYKDSRRAGIPPVLG 406
Query: 169 LGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENG 228
GD + RL+P +I++ +D+ + +V CG H+ ++ + +T+G G NG
Sbjct: 407 HGDCDRRLKPTLIQSL-EDAREEIVKVACGWDHSLAVSASGK--------VYTWGSGTNG 457
Query: 229 QLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
+LGHG +S P V+ + + ++ G HT ++ ++WS G L S
Sbjct: 458 KLGHGDEESFDTPTLVRTM-EGRHVKDAKAGCEHTVFLTYDHELWSCGQGDSGRLGHGDS 516
Query: 289 LTRNE 293
TR
Sbjct: 517 QTRKR 521
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 69/145 (47%), Gaps = 23/145 (15%)
Query: 221 TFGLGENGQLGHGT-----------TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
+FG G++G+LGHG T++ LVP + ++ +D H+ +++
Sbjct: 166 SFGKGDHGKLGHGQCVHVSCQEGNCTENKLVPTMIAATRDILFR-RIDSLSTHSIAITAK 224
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
GD +WG L + S T+ I + + G + +D +ACG HT+ +
Sbjct: 225 GDAMAWGNGDKYRL-GHGSSTKEYTPRMIEHLRLKG------RVRD---LACGLGHTLAL 274
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTID 354
+ G +L++WG G +G LG G T D
Sbjct: 275 MESG-ELFAWGNGSNGRLGLGDTND 298
Score = 43.9 bits (102), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 57/129 (44%), Gaps = 24/129 (18%)
Query: 59 SLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GFSLVSSF 116
SLED A +I V G SLA+ +G ++ WG S T G G SF
Sbjct: 421 SLED-------AREEIVKVACGWDHSLAVSASGKVYTWG------SGTNGKLGHGDEESF 467
Query: 117 -TPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
TP+ V G V G EH V L TY E +S G ++G+LG GD ++R
Sbjct: 468 DTPTLVRTMEGRHVKDAKAGCEHTVFL-----TYDHE---LWSCGQGDSGRLGHGDSQTR 519
Query: 176 LRPKIIETF 184
RP I F
Sbjct: 520 KRPTKIGLF 528
>gi|255572207|ref|XP_002527043.1| Ran GTPase binding protein, putative [Ricinus communis]
gi|223533605|gb|EEF35343.1| Ran GTPase binding protein, putative [Ricinus communis]
Length = 1100
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/295 (26%), Positives = 132/295 (44%), Gaps = 30/295 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPV-WDFHGHTVV 130
I I V G + A+ +G L+ WG+ + G + VS + P V G V
Sbjct: 356 INIELVACGEYHTCAVTLSGDLYTWGDGTY-NFGLLGHGNEVSHWVPKRVNGPLEGIHVS 414
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++CG H + S+G+ +++G G LG GDR+S P+ +E+
Sbjct: 415 SISCGPWHTAVVTSSGQ--------LFTFGDGTFGVLGHGDRKSVSIPREVESLKG---L 463
Query: 191 AVYEVTCGSFHTA----LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
CG +HTA ++ ++ +T+G G+ G+LGHG ++ LVP V
Sbjct: 464 RTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAA 523
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L + + V CG T ++++G V++ G P N D P + G
Sbjct: 524 LVEPNF-CQVACGHSLTVALTTSGHVYTMG-------SPVYGQLGNPQADGKLPNRVEGR 575
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F + ++ACGA H ++T ++++WG+G +G LG G T D P++V
Sbjct: 576 --LSKSFVE--EIACGAYHVAVLTSK-TEVYTWGKGANGRLGHGDTDDRNFPSLV 625
Score = 78.2 bits (191), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 105/246 (42%), Gaps = 43/246 (17%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V +ACG H + GE + SWG + G+LG G L PK+I++ S
Sbjct: 306 VQNIACGGRHAALVTKQGEVF--------SWGEESGGRLGHGVDSDVLHPKLIDSL---S 354
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKE 246
+ V CG +HT +T L +T+G G G LGHG S VP++V
Sbjct: 355 NINIELVACGEYHTCAVT--------LSGDLYTWGDGTYNFGLLGHGNEVSHWVPKRVNG 406
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
+ +++ S+ CG +HT+VV+S+G ++++G + G+ + + +
Sbjct: 407 PLEGIHVSSISCGPWHTAVVTSSGQLFTFG-DGTFGVLGHGDRKSVSIPREVESL----- 460
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTD-----------DGYKLWSWGRGRSGVLGTGKTIDF 355
K V+ ACG HT V + KL++WG G G LG G
Sbjct: 461 -----KGLRTVRAACGVWHTAAVVEVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAK 515
Query: 356 FAPAIV 361
P V
Sbjct: 516 LVPTCV 521
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 106/265 (40%), Gaps = 36/265 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + S+ G + + ++G L+ +G+ G S P V G V+
Sbjct: 411 IHVSSISCGPWHTAVVTSSGQLFTFGDGTF---GVLGHGDRKSVSIPREVESLKGLRTVR 467
Query: 132 VACGSEHVVALVSAGETYKGEDLV-------CYSWGANNNGQLGLGDRESRLRPKIIETF 184
ACG H A+V E G ++WG + G+LG GD+E++L P +
Sbjct: 468 AACGVWHTAAVV---EVMVGNSSSSNCSSGKLFTWGDGDKGRLGHGDKEAKLVPTCVAAL 524
Query: 185 NQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV 244
+ + +V CG T LT +T G GQLG+ L P +V
Sbjct: 525 VEPN---FCQVACGHSLTVALT--------TSGHVYTMGSPVYGQLGNPQADGKL-PNRV 572
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILIS 304
+ ++ + CG +H +V++S +V++WG KG N L + D P L+
Sbjct: 573 EGRLSKSFVEEIACGAYHVAVLTSKTEVYTWG--KG----ANGRLGHGDTDDRNFPSLV- 625
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLV 329
K + +ACG T +
Sbjct: 626 ----EALKDKQVKSIACGTNFTAAI 646
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V ++ACG+ HV L S E Y +WG NG+LG GD + R P ++E
Sbjct: 581 VEEIACGAYHVAVLTSKTEVY--------TWGKGANGRLGHGDTDDRNFPSLVEALKDKQ 632
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
V + CG+ TA + K + + +SMC
Sbjct: 633 ---VKSIACGTNFTAAICLHKWVSGIDQSMC 660
Score = 48.5 bits (114), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 66/138 (47%), Gaps = 19/138 (13%)
Query: 231 GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNAS 288
G G +L+P+ + E + + ++ CG H ++V+ G+V+SWG E G LG ++
Sbjct: 285 GFGVKLDSLLPKAL-ESTVVLDVQNIACGGRHAALVTKQGEVFSWGEESGGRLGHGVDSD 343
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG--RSGV 346
+ + D++S I I VACG HT VT G L++WG G G+
Sbjct: 344 VLHPKLIDSLSNINIE-------------LVACGEYHTCAVTLSG-DLYTWGDGTYNFGL 389
Query: 347 LGTGKTIDFFAPAIVLWP 364
LG G + + P V P
Sbjct: 390 LGHGNEVSHWVPKRVNGP 407
>gi|357156536|ref|XP_003577490.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC4-like
[Brachypodium distachyon]
Length = 422
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 84/310 (27%), Positives = 129/310 (41%), Gaps = 58/310 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK- 131
K+ + AG S A+ G L++WG G V S TP V D+ V+
Sbjct: 123 KVVQISAGNHHSCAVTADGELFVWGKNSSGQLGLGKGVGKVVS-TPRKV-DYLADVRVRM 180
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL---------RPKIIE 182
VA GSEH +A+ GE SWGA G+LG G + S L P++I+
Sbjct: 181 VALGSEHSIAVTEGGE--------ALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIK 232
Query: 183 TFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE 242
+ + + G H+A + + F G+ + G + A P
Sbjct: 233 NLDGVK---IKRIAAGMLHSACIDEKGT----------LFIFGQKTEKVFGRSNDAPRPT 279
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPIL 302
V+E+ + V CG +HT ++ GD++SWG + N L G SP +
Sbjct: 280 VVEEIQ---FSEEVACGGYHTCALTDGGDLYSWGSNE------NGCLGLGVTGMVRSPEV 330
Query: 303 ISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWG--------RGRS--GVLGTGK 351
+ F+ PV +V+CG HT +++ + W WG G+S G LG G
Sbjct: 331 LRST-----LFKLPVSKVSCGWKHTAVISGEDIYTWGWGGANGTFFEEGQSSGGQLGHGN 385
Query: 352 TIDFFAPAIV 361
+D+F P +V
Sbjct: 386 DVDYFEPMMV 395
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 120/315 (38%), Gaps = 45/315 (14%)
Query: 24 YTSLNCCMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMM 83
+ S DG+L G NS + L G + K ++ A +++ V G
Sbjct: 132 HHSCAVTADGELFVWGKNS----SGQLGLGKGVGKVVSTPRKVDYLADVRVRMVALGSEH 187
Query: 84 SLAIDNAGALWMWGNCPLP-----DSSTEGGFSLVSS-FTPSPVWDFHGHTVVKVACGSE 137
S+A+ G WG S+ GF +VSS +TP + + G + ++A G
Sbjct: 188 SIAVTEGGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGML 247
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTC 197
H + G + +G +N+ RP ++E EV C
Sbjct: 248 HSACIDEKGTLFIFGQKTEKVFGRSNDAP----------RPTVVEEIQFSE-----EVAC 292
Query: 198 GSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVD 257
G +HT LT D+ +++G ENG LG G T PE ++ + + V
Sbjct: 293 GGYHTCALTD---GGDL-----YSWGSNENGCLGLGVTGMVRSPEVLRSTLFKLPVSKVS 344
Query: 258 CGLFHTSVVSSAGDV--WSWGMEKGL----GLCPNASLTRNEAGDAISPILISGNGPHGP 311
CG HT+V+S D+ W WG G G L D P+++
Sbjct: 345 CGWKHTAVISGE-DIYTWGWGGANGTFFEEGQSSGGQLGHGNDVDYFEPMMVELG----- 398
Query: 312 KFQDPVQVACGAAHT 326
+ V V+CG HT
Sbjct: 399 RNARAVHVSCGFNHT 413
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 89/212 (41%), Gaps = 29/212 (13%)
Query: 155 VCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDM 214
V WG + G+LGLG ESR P F + + CG HT LT R
Sbjct: 35 VAALWGNGDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGR---- 90
Query: 215 LESMCWTFGLGENGQLGHGTTQSALV-PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
+ GL + GQLG G++ + +V P +V + V V + G H+ V++ G+++
Sbjct: 91 ----VFATGLNDFGQLGIGSSTTHIVDPIEVTGFGEKV--VQISAGNHHSCAVTADGELF 144
Query: 274 SWGMEK----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
WG GLG ++ D ++ + + VA G+ H++ V
Sbjct: 145 VWGKNSSGQLGLGKGVGKVVSTPRKVDYLADVRVR-------------MVALGSEHSIAV 191
Query: 330 TDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
T+ G L SWG +G LG G +V
Sbjct: 192 TEGGEAL-SWGAAGAGRLGHGHKSSILGFGMV 222
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 77/319 (24%), Positives = 120/319 (37%), Gaps = 77/319 (24%)
Query: 95 MWGNCPLPDSSTEGGFSLVSSFTPSPVWDF---HGHTVVKVACGSEHVVALVSAGETYKG 151
+WGN D G +L S + P+ F G +ACG H + L +G +
Sbjct: 38 LWGN---GDYGRLGLGALESRWNPTACPFFLARAGDPPASLACGGAHTLFLTQSGRVF-- 92
Query: 152 EDLVCYSWGANNNGQLGLGDRESRL-RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ G N+ GQLG+G + + P + F + V +++ G+ H+ +T
Sbjct: 93 ------ATGLNDFGQLGIGSSTTHIVDPIEVTGFGEK----VVQISAGNHHSCAVT---- 138
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALV--PEQVKELPQYVYLVSVDCGLFHTSVVSS 268
+ + +G +GQLG G +V P +V L V + V G H+ V+
Sbjct: 139 ----ADGELFVWGKNSSGQLGLGKGVGKVVSTPRKVDYLAD-VRVRMVALGSEHSIAVTE 193
Query: 269 AGDVWSWGMEK-------------GLGLCPN---ASLTRNEAGDAISPIL---------- 302
G+ SWG G G+ + L +N G I I
Sbjct: 194 GGEALSWGAAGAGRLGHGHKSSILGFGMVSSEYTPRLIKNLDGVKIKRIAAGMLHSACID 253
Query: 303 --------------ISGNGPHGPK------FQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
+ G P+ Q +VACG HT +TD G L+SWG
Sbjct: 254 EKGTLFIFGQKTEKVFGRSNDAPRPTVVEEIQFSEEVACGGYHTCALTDGG-DLYSWGSN 312
Query: 343 RSGVLGTGKTIDFFAPAIV 361
+G LG G T +P ++
Sbjct: 313 ENGCLGLGVTGMVRSPEVL 331
>gi|293346825|ref|XP_001064216.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC6 [Rattus
norvegicus]
Length = 1149
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 132/299 (44%), Gaps = 50/299 (16%)
Query: 56 APDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFS 111
+P S + + + I V G S+A+ + G ++ WG + +EG G S
Sbjct: 215 SPQSTKRPEPIQALSTVHIDLVSCGKEHSVAVCHQGRVFTWG------AGSEGQLGIGES 268
Query: 112 LVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD 171
SF P+ + G +++V+CG H +AL ED +SWG+N GQLGLG+
Sbjct: 269 KEISFMPTKINSLAGIKIIQVSCGHYHSLAL--------SEDGQVFSWGSNRQGQLGLGN 320
Query: 172 RE-SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--G 228
S+ P+ +++ + P A +V G H+ L+ M +FG G N G
Sbjct: 321 NLCSQASPQKVKSL-EGIPLA--QVAAGGTHSFALS----------LMGTSFGWGNNRSG 367
Query: 229 QL---GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCP 285
QL G+ + P + L + + +V + CG HTSV++ G V+++G L
Sbjct: 368 QLALSGNSAKEQIYKPHSIGAL-KTLNVVYISCGYEHTSVLTEDGQVFTFGGSSSEQLQH 426
Query: 286 NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ R P LI G G H Q+ CG+ HT+ ++ S GRG S
Sbjct: 427 SPRSGRG------GPQLIEGIGGHVS------QIECGSYHTIAYVYTTGQVVSLGRGPS 473
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/230 (29%), Positives = 104/230 (45%), Gaps = 44/230 (19%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G ++K A G H + L S Y S G N+ GQLG +S RP+ I+
Sbjct: 178 GLKLLKAASGERHSLLLFSNHRVY--------SCGDNSRGQLGQKSPQSTKRPEPIQAL- 228
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV 244
S + V+CG H+ + H+ R +T+G G GQLG G ++ + +P ++
Sbjct: 229 --STVHIDLVSCGKEHSVAVCHQGR--------VFTWGAGSEGQLGIGESKEISFMPTKI 278
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLG--LCPNASLTRNEAGDAI 298
L + ++ V CG +H+ +S G V+SWG + GLG LC AS + ++ + I
Sbjct: 279 NSLAG-IKIIQVSCGHYHSLALSEDGQVFSWGSNRQGQLGLGNNLCSQASPQKVKSLEGI 337
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P+ QVA G H+ ++ G + WG RSG L
Sbjct: 338 -PL---------------AQVAAGGTHSFALSLMGTS-FGWGNNRSGQLA 370
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 101/237 (42%), Gaps = 33/237 (13%)
Query: 64 SKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG----GFSLVSSFTPS 119
+K N A IKI V G SLA+ G ++ WG S+ +G G +L S +P
Sbjct: 276 TKINSLAGIKIIQVSCGHYHSLALSEDGQVFSWG------SNRQGQLGLGNNLCSQASPQ 329
Query: 120 PVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK 179
V G + +VA G H AL G + + WG N +GQL L ++ +
Sbjct: 330 KVKSLEGIPLAQVAAGGTHSFALSLMGTS--------FGWGNNRSGQLALSGNSAKEQIY 381
Query: 180 IIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
+ V ++CG HT++LT + +TFG + QL H
Sbjct: 382 KPHSIGALKTLNVVYISCGYEHTSVLTE--------DGQVFTFGGSSSEQLQHSPRSGRG 433
Query: 240 VPEQVKELPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
P+ ++ + +V ++CG +HT + V + G V S G +G NA T EA
Sbjct: 434 GPQLIEGIGGHVS--QIECGSYHTIAYVYTTGQVVSLG--RGPSCTSNA--THQEAA 484
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 83/181 (45%), Gaps = 27/181 (14%)
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT 234
R +P+ +E + + + G H+ LL R ++ G GQLG +
Sbjct: 167 RRQPRRLEA---GTGLKLLKAASGERHSLLLFSNHR--------VYSCGDNSRGQLGQKS 215
Query: 235 TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRN 292
QS PE ++ L V++ V CG H+ V G V++WG E LG+ + ++
Sbjct: 216 PQSTKRPEPIQALST-VHIDLVSCGKEHSVAVCHQGRVFTWGAGSEGQLGIGESKEIS-- 272
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
P I N G K +QV+CG H++ +++DG +++SWG R G LG G
Sbjct: 273 -----FMPTKI--NSLAGIKI---IQVSCGHYHSLALSEDG-QVFSWGSNRQGQLGLGNN 321
Query: 353 I 353
+
Sbjct: 322 L 322
>gi|195126363|ref|XP_002007640.1| GI13052 [Drosophila mojavensis]
gi|193919249|gb|EDW18116.1| GI13052 [Drosophila mojavensis]
Length = 1053
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/327 (26%), Positives = 128/327 (39%), Gaps = 66/327 (20%)
Query: 62 DDSKTNHKAPIK------------ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGG 109
D S+ H+ P K I + G S+A+ G ++ WG+
Sbjct: 64 DYSQLGHELPTKRPLQIPELQDYVITQIACGSRHSMALSEWGQVFSWGDNECGQLGHASD 123
Query: 110 FSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL 169
+V P V + TVV++ACGS H +AL GE YSWG+N GQLG+
Sbjct: 124 QDIVK--LPKIVRNLVSKTVVQIACGSNHSLALTCCGE--------LYSWGSNLYGQLGV 173
Query: 170 ---GDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
D + P + T V + CG H+ L++ FG G
Sbjct: 174 SSPNDLQQSNTPMRLTTL---LGIPVSAIACGGNHSFLISKSSA----------VFGWGR 220
Query: 227 N--GQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKG 280
N GQLG + P Q+K L + + + V CG + ++ G V++ G + G
Sbjct: 221 NNCGQLGLNDETNRAYPTQLKTL-RTLGVRFVACGDEFSVFLTIEGGVFTCGAGAYGQLG 279
Query: 281 LGLCPNASLTR---NEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLW 337
G N L R G IS QVACG HT+ + +++
Sbjct: 280 HGFSSNEMLPRMVMELMGSTIS------------------QVACGNRHTLALVPSRGRIY 321
Query: 338 SWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+G G SG LGT T P +V+ P
Sbjct: 322 GFGLGSSGQLGTRNTKSLNLPQLVIGP 348
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 115/260 (44%), Gaps = 39/260 (15%)
Query: 93 LWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGE 152
L+ WGN GG TPS + V ++ACG H + L ++G+
Sbjct: 3 LYCWGNASHGQLGL-GGIEEEQILTPSRIPWKPDSAVNQIACGHRHTLFLTASGKV---- 57
Query: 153 DLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPN 212
Y+ G+N+ Q LG RP I QD + + ++ CGS H+ L+ +
Sbjct: 58 ----YACGSNDYSQ--LGHELPTKRPLQIPEL-QD--YVITQIACGSRHSMALSEWGQ-- 106
Query: 213 DMLESMCWTFGLGENGQLGHGTTQSAL-VPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+++G E GQLGH + Q + +P+ V+ L +V + CG H+ ++ G+
Sbjct: 107 ------VFSWGDNECGQLGHASDQDIVKLPKIVRNLVSKT-VVQIACGSNHSLALTCCGE 159
Query: 272 VWSWG--MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ-VACGAAHTVL 328
++SWG + LG+ L ++ ++ +L PV +ACG H+ L
Sbjct: 160 LYSWGSNLYGQLGVSSPNDLQQSNTPMRLTTLL-----------GIPVSAIACGGNHSFL 208
Query: 329 VTDDGYKLWSWGRGRSGVLG 348
++ ++ WGR G LG
Sbjct: 209 ISKSS-AVFGWGRNNCGQLG 227
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,435,634,160
Number of Sequences: 23463169
Number of extensions: 373065065
Number of successful extensions: 907354
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 578
Number of HSP's successfully gapped in prelim test: 4221
Number of HSP's that attempted gapping in prelim test: 835432
Number of HSP's gapped (non-prelim): 26948
length of query: 504
length of database: 8,064,228,071
effective HSP length: 147
effective length of query: 357
effective length of database: 8,910,109,524
effective search space: 3180909100068
effective search space used: 3180909100068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 79 (35.0 bits)