BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 010683
(504 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FN03|UVR8_ARATH Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana GN=UVR8 PE=1
SV=1
Length = 440
Score = 108 bits (270), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 134/295 (45%), Gaps = 45/295 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWG---NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I+I + G LA+ G + WG N L TE S P + F G
Sbjct: 120 IRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTE------DSLVPQKIQAFEGIR 173
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH A+ ED Y WG G LGLGDR RL P+ + + +
Sbjct: 174 IKMVAAGAEHTAAVT--------EDGDLYGWGWGRYGNLGLGDRTDRLVPERVTSTGGEK 225
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
+ V CG HT +++ +T+G + GQLGHG + L+P +++ L
Sbjct: 226 ---MSMVACGWRHTISVSY--------SGALYTYGWSKYGQLGHGDLEDHLIPHKLEALS 274
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILISGN 306
++ + G HT ++S G ++ WG K +G+ N D SP+ +
Sbjct: 275 NS-FISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNL--------DQCSPVQV--- 322
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
P Q VQV+CG HT+ VT+ +++WGRG +G LG G+++D P I+
Sbjct: 323 --RFPDDQKVVQVSCGWRHTLAVTERN-NVFAWGRGTNGQLGIGESVDRNFPKII 374
Score = 92.0 bits (227), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 130/290 (44%), Gaps = 38/290 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
P K+ + AG S+A+ + + WG + G +P+ + GH +V
Sbjct: 14 PRKVLIISAGASHSVALLSGDIVCSWGRG---EDGQLGHGDAEDRPSPTQLSALDGHQIV 70
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
V CG++H VA +G + YSWG + G+LG G+ P I+ +
Sbjct: 71 SVTCGADHTVAYSQSG-------MEVYSWGWGDFGRLGHGNSSDLFTPLPIKALHGIR-- 121
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ ++ CG H +T +E ++G +NGQLG G T+ +LVP++++ +
Sbjct: 122 -IKQIACGDSHCLAVT--------MEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF-EG 171
Query: 251 VYLVSVDCGLFHTSVVSSAGDV--WSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + V G HT+ V+ GD+ W WG LGL + D + P ++ G
Sbjct: 172 IRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGL--------GDRTDRLVPERVTSTG- 222
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
G K VACG HT+ V+ G L+++G + G LG G D P
Sbjct: 223 -GEKMS---MVACGWRHTISVSYSG-ALYTYGWSKYGQLGHGDLEDHLIP 267
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 55/120 (45%), Gaps = 13/120 (10%)
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+ ++V P+ V ++S G H+ + S V SWG + + L +A D
Sbjct: 5 MAADEVTAPPRKVLIIS--AGASHSVALLSGDIVCSWGRGE------DGQLGHGDAEDRP 56
Query: 299 SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
SP +S H V V CGA HTV + G +++SWG G G LG G + D F P
Sbjct: 57 SPTQLSALDGH-----QIVSVTCGADHTVAYSQSGMEVYSWGWGDFGRLGHGNSSDLFTP 111
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 77/185 (41%), Gaps = 29/185 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
K+ V G ++++ +GAL+ +G G L P + + ++
Sbjct: 225 KMSMVACGWRHTISVSYSGALYTYG---WSKYGQLGHGDLEDHLIPHKLEALSNSFISQI 281
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL S G+ Y WG N GQ+G+G+ + P + F D V
Sbjct: 282 SGGWRHTMALTSDGK--------LYGWGWNKFGQVGVGNNLDQCSPVQVR-FPDDQK--V 330
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
+V+CG HT +T R + +G G NGQLG G + + P+ +
Sbjct: 331 VQVSCGWRHTLAVTERNN--------VFAWGRGTNGQLGIGESVD-------RNFPKIIE 375
Query: 253 LVSVD 257
+SVD
Sbjct: 376 ALSVD 380
>sp|Q9UII4|HERC5_HUMAN E3 ISG15--protein ligase HERC5 OS=Homo sapiens GN=HERC5 PE=1 SV=2
Length = 1024
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 100/205 (48%), Gaps = 23/205 (11%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
KI + G SLA+ G L+ WG G S+ TP V G + ++
Sbjct: 139 KIIQITCGDYHSLALSKGGELFAWGQN--LHGQLGVGRKFPSTTTPQIVEHLAGVPLAQI 196
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAV 192
+ G H +AL +G YSWG N GQLGLG ES+ P +IE + V
Sbjct: 197 SAGEAHSMALSMSGNI--------YSWGKNECGQLGLGHTESKDDPSLIEGLDNQK---V 245
Query: 193 YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY 252
V CG H+ALLT + + +TFG G++GQLGH +TQ+ L P V EL Y
Sbjct: 246 EFVACGGSHSALLTQ--------DGLLFTFGAGKHGQLGHNSTQNELRPCLVAELVGY-R 296
Query: 253 LVSVDCGLFHT-SVVSSAGDVWSWG 276
+ + CG +HT + VS G V+S+G
Sbjct: 297 VTQIACGRWHTLAYVSDLGKVFSFG 321
Score = 79.7 bits (195), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/235 (28%), Positives = 113/235 (48%), Gaps = 34/235 (14%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQD 187
++++ CG H +AL GE ++WG N +GQLG+G + S P+I+E
Sbjct: 140 IIQITCGDYHSLALSKGGE--------LFAWGQNLHGQLGVGRKFPSTTTPQIVEHL-AG 190
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
P A +++ G H+ L+ + +++G E GQLG G T+S P ++ L
Sbjct: 191 VPLA--QISAGEAHSMALS--------MSGNIYSWGKNECGQLGLGHTESKDDPSLIEGL 240
Query: 248 P-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
Q V V+ CG H+++++ G ++++G K + L N + + P L++
Sbjct: 241 DNQKVEFVA--CGGSHSALLTQDGLLFTFGAGK------HGQLGHNSTQNELRPCLVAEL 292
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ Q+ACG HT+ D K++S+G G+ G LG G T D P V
Sbjct: 293 VGY-----RVTQIACGRWHTLAYVSDLGKVFSFGSGKDGQLGNGGTRDQLMPLPV 342
>sp|O95714|HERC2_HUMAN E3 ubiquitin-protein ligase HERC2 OS=Homo sapiens GN=HERC2 PE=1 SV=2
Length = 4834
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3047 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3103
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3104 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3152
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3153 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3205
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3206 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3257
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3258 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3303
Score = 92.4 bits (228), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4039 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4095
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4096 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4144
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4145 VVDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4195
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4196 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4243
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4244 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4295
Score = 92.0 bits (227), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 117/243 (48%), Gaps = 38/243 (15%)
Query: 115 SFTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
+ P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 481 TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDT 532
Query: 173 ESRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
PK+I F+ + + V + CGS ++A +T E +T+G G G+LG
Sbjct: 533 VPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLG 584
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
HG+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 585 HGSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KL 637
Query: 290 TRNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVL 347
R + +P LI K Q D V+V CG+ ++ +T DG +++SWG+G + L
Sbjct: 638 GRGGSDGCKTPKLIE-------KLQDLDVVKVRCGSQFSIALTKDG-QVYSWGKGDNQRL 689
Query: 348 GTG 350
G G
Sbjct: 690 GHG 692
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3076 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3117
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3118 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3172
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3173 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3222
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3223 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3276
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3277 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3322
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 131/296 (44%), Gaps = 55/296 (18%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSL-VSSFT---PSPVWDFHGHTVVKVA 133
AGG SL A+ G ++ G +T G L +SS T P + + V KVA
Sbjct: 2998 AGGSKSLFAVTVEGKVYACGE------ATNGRLGLGISSGTVPIPRQITALSSYVVKKVA 3051
Query: 134 C--GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
G H AL G+ + SWG ++G+LG R + +P++IE
Sbjct: 3052 VHSGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR--- 3100
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
+ ++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L +
Sbjct: 3101 IRDIACGSSHSAALTS--------SGELYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH- 3151
Query: 252 YLVSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISG 305
++ V CG T ++ G V+SWG + G G ++ +N +
Sbjct: 3152 RVIQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERL 3202
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
NG Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3203 NG------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3251
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4091 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4144
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4145 VVDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4195
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4196 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4246
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4247 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4298
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4299 --QGKKVN---RVACGSAHTL 4314
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3945 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4001
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4002 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4052
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4053 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4103
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H V +ACG+
Sbjct: 4104 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVVDIACGS 4152
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4153 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4180
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3207 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3263
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3264 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3312
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3313 RVACGSSHSVAWT 3325
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4186 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4242
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4243 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4294
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4295 VAALQGKK---VNRVACGSAHT 4313
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + VVKV CGS+
Sbjct: 612 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVVKVRCGSQF 668
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 669 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 717
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 718 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPAA-LPGLDTKHIVGI 766
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 767 ACGPAQSFAWSSCSE-WSIGLR 787
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 517 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 576
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 577 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 624
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 625 QVWSWGDGDYGKLGRGGSDGCKTPKLI 651
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3955 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3992
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3993 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4051
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4052 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4098
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4099 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4137
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 466 LSRNGRVYTQAYNSDTLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 524
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 525 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 577
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 578 GNYGRLGHGSSEDEAIPMLV 597
>sp|Q4U2R1|HERC2_MOUSE E3 ubiquitin-protein ligase HERC2 OS=Mus musculus GN=Herc2 PE=1 SV=3
Length = 4836
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 132/290 (45%), Gaps = 33/290 (11%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG + A+ G ++ WG D G FS ++ P + +
Sbjct: 3048 VKKVAVHSGGRHATALTVDGKVFSWGEG---DDGKLGHFSRMNCDKPRLIEALKTKRIRD 3104
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H AL S+GE Y+WG G+LG GD ++L+PK+++
Sbjct: 3105 IACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHR--- 3153
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L E + +++G G+ G+LG G ++ +P+ ++ L
Sbjct: 3154 VIQVACGSRDAQTLALTD------EGLVFSWGDGDFGKLGRGGSEGCNIPQNIERL-NGQ 3206
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ ++CG + ++ +G VW+WG L + + + P ++ G G
Sbjct: 3207 GVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHGSDVHVRK------PQVV--EGLRGK 3258
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
K V VA GA H + VTD G ++++WG G G G T P +V
Sbjct: 3259 KI---VHVAVGALHCLAVTDSG-QVYAWGDNDHGQQGNGTTTVNRKPTLV 3304
Score = 92.4 bits (228), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 130/296 (43%), Gaps = 45/296 (15%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IK +V +GG LA+ + G ++ WG + G + P + G VV
Sbjct: 4041 IKKVAVNSGGKHCLALSSEGEVYSWGEA---EDGKLGHGNRSPCDRPRVIESLRGIEVVD 4097
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G H + +AG+ Y+WG G+LG D E +L+PK++E
Sbjct: 4098 VAAGGAHSACVTAAGD--------LYTWGKGRYGRLGHSDSEDQLKPKLVEALQGHR--- 4146
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V ++ CGS T LT + W++G G+ G+LG G + VP ++ L
Sbjct: 4147 VIDIACGSGDAQTLCLTD--------DDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL-T 4197
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISG 305
+ +V V+CG + ++ +G V++WG KG LG + + R
Sbjct: 4198 GLGVVKVECGSQFSVALTKSGAVYTWG--KGDYHRLGHGSDDHVRRPR----------QV 4245
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G G K + +A G+ H V T+DG ++++WG G LG G T P +V
Sbjct: 4246 QGLQGKKV---IAIATGSLHCVCCTEDG-EVYTWGDNDEGQLGDGTTNAIQRPRLV 4297
Score = 90.9 bits (224), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 75/242 (30%), Positives = 116/242 (47%), Gaps = 38/242 (15%)
Query: 116 FTPSPVWDFHGHTVVKVACGSE--HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
P V +VK+A S+ H +AL + GE Y SWG + G+LG GD
Sbjct: 483 LAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVY--------SWGCGDGGRLGHGDTV 534
Query: 174 SRLRPKIIETFN-QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
PK+I F+ + + V + CGS ++A +T E +T+G G G+LGH
Sbjct: 535 PLEEPKVISAFSGKQAGKHVVHIACGSTYSAAIT--------AEGELYTWGRGNYGRLGH 586
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGL--FHTSVVSSAGDVWSWGMEKGLGLCPNASLT 290
G+++ +P V L + + ++ V CG T V+ G VWSWG + G L
Sbjct: 587 GSSEDEAIPMLVAGL-KGLKVIDVACGSGDAQTLAVTENGQVWSWG-DGDYG-----KLG 639
Query: 291 RNEAGDAISPILISGNGPHGPKFQ--DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
R + +P LI K Q D ++V CG+ ++ +T DG +++SWG+G + LG
Sbjct: 640 RGGSDGCKTPKLIE-------KLQDLDVIKVRCGSQFSIALTKDG-QVYSWGKGDNQRLG 691
Query: 349 TG 350
G
Sbjct: 692 HG 693
Score = 83.6 bits (205), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 84/297 (28%), Positives = 126/297 (42%), Gaps = 51/297 (17%)
Query: 32 DGQLG-FSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNA 90
DG+LG FS N P +IE T +I + G S A+ ++
Sbjct: 3077 DGKLGHFSRMNCDKPRLIEALKTK------------------RIRDIACGSSHSAALTSS 3118
Query: 91 GALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYK 150
G L+ WG L + G + P V GH V++VACGS L E
Sbjct: 3119 GELYTWG---LGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEG-- 3173
Query: 151 GEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKR 210
+ +SWG + G+LG G E P+ IE N V ++ CG+ + LT
Sbjct: 3174 ----LVFSWGDGDFGKLGRGGSEGCNIPQNIERLNGQ---GVCQIECGAQFSLALTK--- 3223
Query: 211 PNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAG 270
+ WT+G G+ +LGHG+ P+ V+ L + +V V G H V+ +G
Sbjct: 3224 -----SGVVWTWGKGDYFRLGHGSDVHVRKPQVVEGL-RGKKIVHVAVGALHCLAVTDSG 3277
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTV 327
V++WG + G N + T N P L+ G + Q +VACG++H+V
Sbjct: 3278 QVYAWG-DNDHGQQGNGTTTVNR-----KPTLV-----QGLEGQKITRVACGSSHSV 3323
Score = 82.8 bits (203), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 129/294 (43%), Gaps = 51/294 (17%)
Query: 79 AGGMMSL-AIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP--VWDFHGHTVVKVAC- 134
AGG SL A+ G ++ G ++ G + S P P + + V KVA
Sbjct: 2999 AGGSKSLFAVTVEGKVYSCGEA----TNGRLGLGMSSGTVPIPRQITALSSYVVKKVAVH 3054
Query: 135 -GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G H AL G+ + SWG ++G+LG R + +P++IE +
Sbjct: 3055 SGGRHATALTVDGKVF--------SWGEGDDGKLGHFSRMNCDKPRLIEALKTKR---IR 3103
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
++ CGS H+A LT +T+GLGE G+LGHG + L P+ VK L + +
Sbjct: 3104 DIACGSSHSAALTSSGE--------LYTWGLGEYGRLGHGDNTTQLKPKMVKVLLGH-RV 3154
Query: 254 VSVDCGL--FHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDAISPILISGNG 307
+ V CG T ++ G V+SWG + G G ++ +N + NG
Sbjct: 3155 IQVACGSRDAQTLALTDEGLVFSWGDGDFGKLGRGGSEGCNIPQN---------IERLNG 3205
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q Q+ CGA ++ +T G +W+WG+G LG G + P +V
Sbjct: 3206 ------QGVCQIECGAQFSLALTKSGV-VWTWGKGDYFRLGHGSDVHVRKPQVV 3252
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 74/261 (28%), Positives = 112/261 (42%), Gaps = 42/261 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP---LPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I++ V AGG S + AG L+ WG L S +E P V GH
Sbjct: 4093 IEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSE------DQLKPKLVEALQGHR 4146
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V+ +ACGS L +D +SWG + G+LG G + P I++ +
Sbjct: 4147 VIDIACGSGDAQTLCLT------DDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSL---T 4197
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V +V CGS + LT +T+G G+ +LGHG+ P QV+ L
Sbjct: 4198 GLGVVKVECGSQFSVALTK--------SGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGL- 4248
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGN 306
Q ++++ G H + G+V++WG E LG ++ R P L++
Sbjct: 4249 QGKKVIAIATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQR--------PRLVAAL 4300
Query: 307 GPHGPKFQDPVQVACGAAHTV 327
G K +VACG+AHT+
Sbjct: 4301 --QGKKVN---RVACGSAHTL 4316
Score = 63.2 bits (152), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 119/269 (44%), Gaps = 35/269 (13%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
+L+ +G ++ WG+ GG P+P V++ G + + A+
Sbjct: 3947 TLSAGGSGTIYGWGH---NHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVT 4003
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
+ G+ Y+ G G+LG+G ES P ++E+ Q V G H
Sbjct: 4004 ADGK--------LYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHCL 4054
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ E +++G E+G+LGHG P ++ L + + +V V G H+
Sbjct: 4055 ALSS--------EGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-RGIEVVDVAAGGAHS 4105
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
+ V++AGD+++WG + L +++ D + P L+ H + +ACG+
Sbjct: 4106 ACVTAAGDLYTWGKGR------YGRLGHSDSEDQLKPKLVEALQGH-----RVIDIACGS 4154
Query: 324 --AHTVLVTDDGYKLWSWGRGRSGVLGTG 350
A T+ +TDD +WSWG G G LG G
Sbjct: 4155 GDAQTLCLTDDD-TVWSWGDGDYGKLGRG 4182
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 14/133 (10%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+C ++ G SLA+ +G +W WG D G S V P V G +V VA
Sbjct: 3208 VCQIECGAQFSLALTKSGVVWTWGKG---DYFRLGHGSDVHVRKPQVVEGLRGKKIVHVA 3264
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ H +A+ +G+ Y+WG N++GQ G G +P +++ +
Sbjct: 3265 VGALHCLAVTDSGQV--------YAWGDNDHGQQGNGTTTVNRKPTLVQGLEGQK---IT 3313
Query: 194 EVTCGSFHTALLT 206
V CGS H+ T
Sbjct: 3314 RVACGSSHSVAWT 3326
Score = 60.1 bits (144), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 60/142 (42%), Gaps = 22/142 (15%)
Query: 69 KAPIKICS--------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSP 120
K P+KI S V+ G S+A+ +GA++ WG D G S P
Sbjct: 4188 KVPMKIDSLTGLGVVKVECGSQFSVALTKSGAVYTWGKG---DYHRLGHGSDDHVRRPRQ 4244
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V G V+ +A GS H V GE Y+WG N+ GQLG G + RP++
Sbjct: 4245 VQGLQGKKVIAIATGSLHCVCCTEDGEV--------YTWGDNDEGQLGDGTTNAIQRPRL 4296
Query: 181 IETFNQDSPWAVYEVTCGSFHT 202
+ V V CGS HT
Sbjct: 4297 VAALQGKK---VNRVACGSAHT 4315
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/202 (28%), Positives = 79/202 (39%), Gaps = 28/202 (13%)
Query: 79 AGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEH 138
+G +LA+ G +W WG+ D G TP + V+KV CGS+
Sbjct: 613 SGDAQTLAVTENGQVWSWGDG---DYGKLGRGGSDGCKTPKLIEKLQDLDVIKVRCGSQF 669
Query: 139 VVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCG 198
+AL G+ Y SWG +N +LG G E PK++E V +V G
Sbjct: 670 SIALTKDGQVY--------SWGKGDNQRLGHGTEEHVRYPKLLEGLQGKK---VIDVAAG 718
Query: 199 SFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP--QYVYLVSV 256
S H LT E W G N Q H T PE LP ++V +
Sbjct: 719 STHCLALTEDS------EVHSW----GSNDQCQHFDTLRVTKPEPTA-LPGLDSKHIVGI 767
Query: 257 DCGLFHTSVVSSAGDVWSWGME 278
CG + SS + WS G+
Sbjct: 768 ACGPAQSFAWSSCSE-WSIGLR 788
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 75/147 (51%), Gaps = 17/147 (11%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYV---YLVSVDCGLFHTSVVSSAGDVWSWG 276
+++G G+ G+LGHG T P+ + ++V + CG +++ +++ G++++WG
Sbjct: 518 YSWGCGDGGRLGHGDTVPLEEPKVISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWG 577
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA--AHTVLVTDDGY 334
L + D P+L++G G K D VACG+ A T+ VT++G
Sbjct: 578 RGN------YGRLGHGSSEDEAIPMLVAGL--KGLKVID---VACGSGDAQTLAVTENG- 625
Query: 335 KLWSWGRGRSGVLGTGKTIDFFAPAIV 361
++WSWG G G LG G + P ++
Sbjct: 626 QVWSWGDGDYGKLGRGGSDGCKTPKLI 652
Score = 50.1 bits (118), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 92/220 (41%), Gaps = 52/220 (23%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y WG N+ GQLG IE P C + T RP ++
Sbjct: 3957 YGWGHNHRGQLG-----------GIEGAKVKVP-----TPCEALATL------RPVQLIG 3994
Query: 217 SMCWTFGLGENGQL-----------GHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHT 263
F + +G+L G G T+S P ++ + Q+V++ V+V+ G H
Sbjct: 3995 GEQTLFAVTADGKLYATGYGAGGRLGIGGTESVSTPTLLESI-QHVFIKKVAVNSGGKHC 4053
Query: 264 SVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVAC 321
+SS G+V+SWG E G LG + R +++ I + V VA
Sbjct: 4054 LALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEV-------------VDVAA 4100
Query: 322 GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G AH+ VT G L++WG+GR G LG + D P +V
Sbjct: 4101 GGAHSACVTAAG-DLYTWGKGRYGRLGHSDSEDQLKPKLV 4139
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 224 LGENGQL-GHGTTQSALVPEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGL 281
L NG++ L P+ V+ L + + ++ H +++ G+V+SWG G
Sbjct: 467 LSRNGRVYTQAYNSDMLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDG- 525
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR 341
G + E IS G H V +ACG+ ++ +T +G +L++WGR
Sbjct: 526 GRLGHGDTVPLEEPKVISAFSGKQAGKH------VVHIACGSTYSAAITAEG-ELYTWGR 578
Query: 342 GRSGVLGTGKTIDFFAPAIV 361
G G LG G + D P +V
Sbjct: 579 GNYGRLGHGSSEDEAIPMLV 598
>sp|Q9VR91|HERC2_DROME Probable E3 ubiquitin-protein ligase HERC2 OS=Drosophila melanogaster
GN=HERC2 PE=1 SV=3
Length = 4912
Score = 97.1 bits (240), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 139/295 (47%), Gaps = 41/295 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG +LA+ G ++ WG + G + + P V +
Sbjct: 3073 VKKVAVHSGGKHALALTLDGKVFSWGEG---EDGKLGHGNRTTLDKPRLVEALRAKKIRD 3129
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACGS H A+ S GE Y+WG G+LG GD ++L+PK++ +
Sbjct: 3130 VACGSSHSAAISSQGE--------LYTWGLGEYGRLGHGDNTTQLKPKLVTAL---AGRR 3178
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
V +V CGS L + + +++G G+ G+LG G ++ + P +++ L +
Sbjct: 3179 VVQVACGSRDAQTLALTE------DGAVFSWGDGDFGKLGRGGSEGSDTPHEIERL-SGI 3231
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V ++CG + ++ AG+VW+WG KG LG + + + + PI
Sbjct: 3232 GVVQIECGAQFSLALTRAGEVWTWG--KGDYYRLGHGGDQHVRKPQ------PI------ 3277
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
G + + + VA GA H + VTD G ++++WG G G+G T PA+V+
Sbjct: 3278 -GGLRGRRVIHVAVGALHCLAVTDAG-QVYAWGDNDHGQQGSGNTFVNKKPALVI 3330
Score = 93.2 bits (230), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 79/294 (26%), Positives = 132/294 (44%), Gaps = 41/294 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+K +V +GG LA+ G ++ WG + G + +S P V +G +V
Sbjct: 4136 VKKVAVNSGGKHCLALTTEGEVYAWGEG---EDGKLGHGNRMSYDRPKLVEHLNGMSVAD 4192
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
+ACGS H A+ ++G +WG G+LG GD E +LRPK++E +
Sbjct: 4193 IACGSAHSAAITASGHVL--------TWGKGRYGRLGHGDSEDQLRPKLVEALLG---YR 4241
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYV 251
++ CGS L N W++G G+ G+LG G + +P +++ L +
Sbjct: 4242 AIDIACGSGDAQTLCITDDDN------VWSWGDGDYGKLGRGGSDGCKLPYKIESLAG-L 4294
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKG----LGLCPNASLTRNEAGDAISPILISGNG 307
+V V+CG + ++ +G V++WG KG LG + R + A+
Sbjct: 4295 GVVKVECGSQFSVALTKSGAVYTWG--KGDFHRLGHGSVDHVRRPKKVAAL--------- 4343
Query: 308 PHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G K + +A G+ H V +D G ++++WG G LG G P +V
Sbjct: 4344 -QGKKI---ISIATGSLHCVACSDSG-EVYTWGDNDEGQLGDGTVTAIQRPRLV 4392
Score = 66.6 bits (161), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 19/162 (11%)
Query: 55 GAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS 114
G D + K A + + V+ G S+A+ +GA++ WG D G S+
Sbjct: 4277 GGSDGCKLPYKIESLAGLGVVKVECGSQFSVALTKSGAVYTWGKG---DFHRLGHGSVDH 4333
Query: 115 SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRES 174
P V G ++ +A GS H VA +GE Y +WG N+ GQLG G +
Sbjct: 4334 VRRPKKVAALQGKKIISIATGSLHCVACSDSGEVY--------TWGDNDEGQLGDGTVTA 4385
Query: 175 RLRPKIIETFNQDSPWAVYEVTCGSFH-----TALLTHRKRP 211
RP+++ + +VTCGS H T+ L+ R RP
Sbjct: 4386 IQRPRLVAALQGKH---IVKVTCGSAHTLALSTSQLSERLRP 4424
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 32/216 (14%)
Query: 152 EDLVC--YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHR 208
+DL C WG N+ QLG G + S+++ P +T ++ P + GS +++
Sbjct: 2982 QDLPCTVMVWGLNDKEQLG-GLKGSKVKVPTFSQTISRLRP---IHIAGGSKSLFIVSQ- 3036
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVY-LVSVDCGLFHTSVVS 267
+ + G G NG+LG G T + +P Q+ L QYV V+V G H ++
Sbjct: 3037 -------DGKVYACGEGTNGRLGLGVTHNVPLPHQLPVLRQYVVKKVAVHSGGKHALALT 3089
Query: 268 SAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
G V+SWG E G LG +L + +A+ K +D VACG++H
Sbjct: 3090 LDGKVFSWGEGEDGKLGHGNRTTLDKPRLVEAL----------RAKKIRD---VACGSSH 3136
Query: 326 TVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ ++ G +L++WG G G LG G P +V
Sbjct: 3137 SAAISSQG-ELYTWGLGEYGRLGHGDNTTQLKPKLV 3171
Score = 58.9 bits (141), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 14/131 (10%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + ++ G SLA+ AG +W WG D G P P+ G V+
Sbjct: 3231 IGVVQIECGAQFSLALTRAGEVWTWGKG---DYYRLGHGGDQHVRKPQPIGGLRGRRVIH 3287
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VA G+ H +A+ AG+ Y+WG N++GQ G G+ +P ++ D+ +
Sbjct: 3288 VAVGALHCLAVTDAGQV--------YAWGDNDHGQQGSGNTFVNKKPALV--IGLDAVF- 3336
Query: 192 VYEVTCGSFHT 202
V V CGS H+
Sbjct: 3337 VNRVACGSSHS 3347
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/269 (28%), Positives = 116/269 (43%), Gaps = 44/269 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ SV G S AI G L WG + G + P+ V H VV VA
Sbjct: 670 VQSVYCGCSYSAAITCGGNLLTWGRG---TYARLGHGNSDDRSLPTLVVALSDHMVVDVA 726
Query: 134 CGS--EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
GS H +AL S G + ++WG + G+LG G+ L+P ++E+ +
Sbjct: 727 LGSGDAHSLALTSEG--------LVFAWGDGDYGKLGNGNCNGSLQPILVESLPR----- 773
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFG----LGENGQLGHGTTQSALVPEQVKEL 247
V V GS + L+ E +T+G LG QL + Q VP V L
Sbjct: 774 VQRVFAGSQFSVALSS--------EGQLYTWGKATCLGH--QLVERSVQGCSVPRLVSSL 823
Query: 248 PQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNG 307
Q+ +V V + H +SS+G+V+ WG +CP AS++ +PIL+S
Sbjct: 824 -QHKRIVDVAVSVAHCLALSSSGEVFGWGRNDSQQICP-ASVSSEPL--LRTPILVS--- 876
Query: 308 PHGPKFQDPVQ-VACGAAHTVLVTDDGYK 335
P F P +AC +A +++ T ++
Sbjct: 877 --LPTF--PASGIACTSAQSLVWTQSSHQ 901
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 100/225 (44%), Gaps = 28/225 (12%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE+ +LGHG T + VP ++ L Q+ + SV CG +++ ++ G++ +WG
Sbjct: 638 YSWGTGEDHRLGHGDTHARAVPTKIAALEQHC-VQSVYCGCSYSAAITCGGNLLTWGRGT 696
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
A L + D P L+ H V + G AH++ +T +G +++W
Sbjct: 697 ------YARLGHGNSDDRSLPTLVVALSDH---MVVDVALGSGDAHSLALTSEGL-VFAW 746
Query: 340 GRGRSGVLGTGKTIDFFAPAIVLWPPLTEEF-----------KQDELNTGG----LDDEI 384
G G G LG G P +V P + + +L T G L ++
Sbjct: 747 GDGDYGKLGNGNCNGSLQPILVESLPRVQRVFAGSQFSVALSSEGQLYTWGKATCLGHQL 806
Query: 385 KTKDLEGAEERDEKLSSAMEEMKLLQSKLSVMERYASILHGSIFG 429
+ ++G +L S+++ +++ +SV A G +FG
Sbjct: 807 VERSVQGCSV--PRLVSSLQHKRIVDVAVSVAHCLALSSSGEVFG 849
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/232 (26%), Positives = 101/232 (43%), Gaps = 44/232 (18%)
Query: 118 PSPVWDFHGHTVVKVA--CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR 175
P P+ + + +A C H +A+ S Y SWG + +LG GD +R
Sbjct: 605 PLPMEEVAHDVFISIAGHCEGRHFLAIDSNHNAY--------SWGTGEDHRLGHGDTHAR 656
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
P I Q +VY CG ++A +T T+G G +LGHG +
Sbjct: 657 AVPTKIAALEQHCVQSVY---CGCSYSAAIT--------CGGNLLTWGRGTYARLGHGNS 705
Query: 236 QSALVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLT 290
+P V L ++ + V++ G H+ ++S G V++WG + G G C N SL
Sbjct: 706 DDRSLPTLVVALSDHMVVDVALGSGDAHSLALTSEGLVFAWGDGDYGKLGNGNC-NGSL- 763
Query: 291 RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
PIL+ P+ Q +V G+ +V ++ +G +L++WG+
Sbjct: 764 --------QPILVESL----PRVQ---RVFAGSQFSVALSSEG-QLYTWGKA 799
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 157 YSWGANNNGQLGLGDRESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y WG N+ GQLG G SR++ P E + P ++ G +T P+ L
Sbjct: 4052 YGWGHNHRGQLG-GLEGSRIKTPTPCEALSLLRP---VQLAGGEQSLFAVT----PDGKL 4103
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL--VSVDCGLFHTSVVSSAGDVW 273
+ G G G+LG G + S +P + L Q+V++ V+V+ G H +++ G+V+
Sbjct: 4104 ----FATGYGSGGRLGVGGSDSWAIPTLLGSL-QHVFVKKVAVNSGGKHCLALTTEGEVY 4158
Query: 274 SWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+WG E G LG S R + + ++ + ++ +ACG+AH+ +T
Sbjct: 4159 AWGEGEDGKLGHGNRMSYDRPKLVEHLNGMSVA-------------DIACGSAHSAAITA 4205
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
G+ L +WG+GR G LG G + D P +V
Sbjct: 4206 SGHVL-TWGKGRYGRLGHGDSEDQLRPKLV 4234
Score = 36.6 bits (83), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKV 132
++ V G + LA+ +AG ++ WG+ D +G + + P+ V V +V
Sbjct: 3284 RVIHVAVGALHCLAVTDAGQVYAWGDN---DHGQQGSGNTFVNKKPALVIGLDAVFVNRV 3340
Query: 133 ACGSEHVVA 141
ACGS H +A
Sbjct: 3341 ACGSSHSIA 3349
>sp|Q15751|HERC1_HUMAN Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens GN=HERC1
PE=1 SV=2
Length = 4861
Score = 93.6 bits (231), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 185/453 (40%), Gaps = 83/453 (18%)
Query: 68 HKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG-GFSLVSSFTPSPVWDFHG 126
H++ K+ S K +LA G ++ WG+ D G G S + G
Sbjct: 454 HRSIKKVSSSKGSDGHTLAFTTEGEVFSWGDG---DYGKLGHGNSSTQKYPKLIQGPLQG 510
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
VV V+ G H A+ GE Y+WG + G+LG GD SR P +++ +
Sbjct: 511 KVVVCVSAGYRHSAAVTEDGE--------LYTWGEGDFGRLGHGDSNSRNIPTLVKDISN 562
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
V EV+CGS HT L+ R W+FG G+NG+LGHG T P+ ++
Sbjct: 563 -----VGEVSCGSSHTIALSKDGR-------TVWSFGGGDNGKLGHGDTNRVYKPKVIEA 610
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
L Q +++ V G + ++S G V++WG LG C ++ T A+ P LI
Sbjct: 611 L-QGMFIRKVCAGSQSSLALTSTGQVYAWGCGACLG-CGSSEAT------ALRPKLIEEL 662
Query: 307 GPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPL 366
V V+ G +H + ++ D ++++WG G G G + P+
Sbjct: 663 AA-----TRIVDVSIGDSHCLALSHDN-EVYAWGNNSMGQCGQGNSTG----------PI 706
Query: 367 TEEFKQDELNTGGLDDEIKTKDLEG---------AEERDEKLSS-------AMEEMKLLQ 410
T+ K GLD I + + A RD ++ + +EE
Sbjct: 707 TKPKK-----VSGLDG-IAIQQISAGTSHSLAWTALPRDRQVVAWHRPYCVDLEESTFSH 760
Query: 411 SKLSVMERYASILHGSIFGKPFAAEQDIPISLKDMGFFDI-TKEWENMLESA-----DRS 464
+ S +ERY ++ I PF P S + F + K N L A S
Sbjct: 761 LR-SFLERYCDKINSEIPPLPF------PSSREHHSFLKLCLKLLSNHLALALAGGVATS 813
Query: 465 KLVRLERFYRNMLAGVKDKLMKRRIQEIVNECL 497
L R RN+L + D + IQE+V E L
Sbjct: 814 ILGRQAGPLRNLLFRLMDSTVPDEIQEVVIETL 846
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 127/278 (45%), Gaps = 34/278 (12%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S+A+ +G ++ WG+ D G + P + G VV+++CG +H +
Sbjct: 4094 SMALTESGEVFSWGDG---DYGKLGHGNSDRQRRPRQIEALQGEEVVQMSCGFKHSAVVT 4150
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTA 203
S G+ +++G + G+LGLG+ ++ P+ + + + +V CG HT
Sbjct: 4151 SDGK--------LFTFGNGDYGRLGLGNTSNKKLPERVTALEG---YQIGQVACGLNHTL 4199
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
++ SM W FG G+ G+LG G + + P+++ L + + V CG +
Sbjct: 4200 AVSADG-------SMVWAFGDGDYGKLGLGNSTAKSSPQKIDVLCG-IGIKKVACGTQFS 4251
Query: 264 SVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGA 323
++ G V+++G ++ +GL P RN P+L G +D VA GA
Sbjct: 4252 VALTKDGHVYTFGQDRLIGL-PEGR-ARNHNRPQQIPVLA------GVIIED---VAVGA 4300
Query: 324 AHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
HT+ + +G +++WG G LG G T P +V
Sbjct: 4301 EHTLALASNG-DVYAWGSNSEGQLGLGHTNHVREPTLV 4337
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 93/202 (46%), Gaps = 21/202 (10%)
Query: 160 GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMC 219
G + G+LGLGD ++ K + S V HT T E
Sbjct: 428 GKGSYGRLGLGDSNNQSTLKKLTFEPHRSIKKVSSSKGSDGHTLAFT--------TEGEV 479
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G G+ G+LGHG + + P+ ++ Q +V V G H++ V+ G++++WG
Sbjct: 480 FSWGDGDYGKLGHGNSSTQKYPKLIQGPLQGKVVVCVSAGYRHSAAVTEDGELYTWGEGD 539
Query: 280 GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
L S +RN P L+ G +V+CG++HT+ ++ DG +WS+
Sbjct: 540 FGRLGHGDSNSRN------IPTLVKDISNVG-------EVSCGSSHTIALSKDGRTVWSF 586
Query: 340 GRGRSGVLGTGKTIDFFAPAIV 361
G G +G LG G T + P ++
Sbjct: 587 GGGDNGKLGHGDTNRVYKPKVI 608
Score = 47.0 bits (110), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 59/138 (42%), Gaps = 20/138 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
I I V G S+A+ G ++ +G LP+ + P + G
Sbjct: 4239 IGIKKVACGTQFSVALTKDGHVYTFGQDRLIGLPEGRAR------NHNRPQQIPVLAGVI 4292
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ VA G+EH +AL S G+ Y +WG+N+ GQLGLG P ++ +
Sbjct: 4293 IEDVAVGAEHTLALASNGDVY--------AWGSNSEGQLGLGHTNHVREPTLVTGLQGKN 4344
Query: 189 PWAVYEVTCGSFHTALLT 206
V +++ G H+A T
Sbjct: 4345 ---VRQISAGRCHSAAWT 4359
>sp|Q6P798|RCBT2_RAT RCC1 and BTB domain-containing protein 2 OS=Rattus norvegicus
GN=Rcbtb2 PE=2 SV=1
Length = 551
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++S+ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVMSIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVMSIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G +++WG + G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKSQGGHVYMWGQCRGQSVILPHLTHFCCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVTWRLLSVE 373
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ S+ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMSIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 300
>sp|Q8IVU3|HERC6_HUMAN Probable E3 ubiquitin-protein ligase HERC6 OS=Homo sapiens GN=HERC6
PE=2 SV=2
Length = 1022
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 115/246 (46%), Gaps = 31/246 (12%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRL 176
P P+ V V+CG EH +A+ G ++WGA + GQLG+G+ +E
Sbjct: 66 PEPIQALETLIVDLVSCGKEHSLAVCHKGRV--------FAWGAGSEGQLGIGEFKEISF 117
Query: 177 RPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT- 235
PK I T N + +V+CG +H+ L+ +S +++G +GQLG G
Sbjct: 118 TPKKIMTLND---IKIIQVSCGHYHSLALSK--------DSQVFSWGKNSHGQLGLGKEF 166
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
S P++V+ L + + L V G H+ +S G + WG L + RN
Sbjct: 167 PSQASPQRVRSL-EGIPLAQVAAGGAHSFALSLCGTSFGWGSNSAGQLALSG---RNVPV 222
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+ P+ + G V ++CG AHT ++T DG K++++G RSG LG T +
Sbjct: 223 QSNKPLSVGALKNLG-----VVYISCGDAHTAVLTQDG-KVFTFGDNRSGQLGYSPTPEK 276
Query: 356 FAPAIV 361
P +V
Sbjct: 277 RGPQLV 282
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 90/210 (42%), Gaps = 29/210 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF----TPSPVWDFHGH 127
IKI V G SLA+ ++ WG ++ G L F +P V G
Sbjct: 128 IKIIQVSCGHYHSLALSKDSQVFSWGK------NSHGQLGLGKEFPSQASPQRVRSLEGI 181
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+ +VA G H AL G + + WG+N+ GQL L R ++ +
Sbjct: 182 PLAQVAAGGAHSFALSLCGTS--------FGWGSNSAGQLALSGRNVPVQSNKPLSVGAL 233
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKEL 247
V ++CG HTA+LT + +TFG +GQLG+ T P+ V+ +
Sbjct: 234 KNLGVVYISCGDAHTAVLTQ--------DGKVFTFGDNRSGQLGYSPTPEKRGPQLVERI 285
Query: 248 PQYVYLVSVDCGLFHT-SVVSSAGDVWSWG 276
V +DCG +HT + V + G V S+G
Sbjct: 286 DGLV--SQIDCGSYHTLAYVHTTGQVVSFG 313
Score = 69.7 bits (169), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 76/286 (26%), Positives = 123/286 (43%), Gaps = 66/286 (23%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS----SFTPSPVWDFHGHTVVKV 132
V G SLA+ + G ++ WG + +EG + SFTP + + +++V
Sbjct: 80 VSCGKEHSLAVCHKGRVFAWG------AGSEGQLGIGEFKEISFTPKKIMTLNDIKIIQV 133
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWA 191
+CG H +AL +D +SWG N++GQLGLG S+ P+ + + + P A
Sbjct: 134 SCGHYHSLAL--------SKDSQVFSWGKNSHGQLGLGKEFPSQASPQRVRSL-EGIPLA 184
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWT-FGLGEN--GQL---GHGTTQSALVPEQVK 245
+V G H+ L S+C T FG G N GQL G + P V
Sbjct: 185 --QVAAGGAHSFAL-----------SLCGTSFGWGSNSAGQLALSGRNVPVQSNKPLSVG 231
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKG--LGLCPNASLTRNEAGDAISPILI 303
L + + +V + CG HT+V++ G V+++G + LG P
Sbjct: 232 AL-KNLGVVYISCGDAHTAVLTQDGKVFTFGDNRSGQLGYSPTPE--------------- 275
Query: 304 SGNGPHGPKFQDPV-----QVACGAAHTVLVTDDGYKLWSWGRGRS 344
GP+ + + Q+ CG+ HT+ ++ S+G G S
Sbjct: 276 ----KRGPQLVERIDGLVSQIDCGSYHTLAYVHTTGQVVSFGHGPS 317
>sp|Q6PAV2|HERC4_MOUSE Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus GN=Herc4
PE=2 SV=2
Length = 1057
Score = 90.5 bits (223), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 83/276 (30%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIDCQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + V CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQVACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 83/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVACGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIDCQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ QVACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQVACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRRSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVACGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---DCQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E + + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRRSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V VACG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVACGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>sp|Q5PQN1|HERC4_RAT Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus
GN=Herc4 PE=2 SV=1
Length = 1057
Score = 90.1 bits (222), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLQGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GIECQKQTSPQLIKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTQIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 81.3 bits (199), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 130/297 (43%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G L S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLQGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG + + + P++I++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGIECQKQTSPQLIKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ Q+ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTQIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 71.6 bits (174), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 103/252 (40%), Gaps = 68/252 (26%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL----------- 205
WG + GQLGLG D E L P+ + F V +V CG HT +
Sbjct: 4 WGNASYGQLGLGGIDEEIVLEPRKSDFFVNKK---VRDVGCGLRHTVFVLDDGTVYTCGC 60
Query: 206 ---------THRKRPNDML----------------------ESMCWTFGLGENGQLG-HG 233
RK+P ++ + + +GL +GQLG G
Sbjct: 61 NDLGQLGHEKSRKKPEQVVALDAQNIVAVSCGEAHTLALNDKGQVYAWGLDSDGQLGLQG 120
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASL 289
+ + VP +K L + +V V CG +H+ +S A +V+ WG K GLG+
Sbjct: 121 SEECIRVPRNIKSLSD-IQIVQVACGYYHSLALSKASEVFCWGQNKYGQLGLGI------ 173
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
E SP LI G F +QVA G AH+ ++T G ++ WGR + G LG
Sbjct: 174 ---ECQKQTSPQLIK--SLLGIPF---MQVAAGGAHSFVLTLSG-AIFGWGRNKFGQLGL 224
Query: 350 GKTIDFFAPAIV 361
D + P ++
Sbjct: 225 NDENDRYVPNLL 236
Score = 43.9 bits (102), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASYGQLGLGGIDEEIVLEPRKSDFFVNKKVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>sp|Q5RCZ7|RCBT2_PONAB RCC1 and BTB domain-containing protein 2 OS=Pongo abelii GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 295 SNQSYPTPV 303
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 354
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 355 DVFACFATPAVTWRLLSVE 373
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
>sp|O95199|RCBT2_HUMAN RCC1 and BTB domain-containing protein 2 OS=Homo sapiens GN=RCBTB2
PE=2 SV=1
Length = 551
Score = 89.7 bits (221), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 115/249 (46%), Gaps = 31/249 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + +G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLNGKKIACLSYGSGPHIVLATTEGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT + + +G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTS--------DGEVFAWGYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q +V++ CG V G+V+ WG N L
Sbjct: 187 GSTVNQPIPRRVTGCLQNKVVVTIACGQMCCMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 NSGNQPTPCRVA--ALQGIRVQ---RVACGYAHTLVLTDEG-QVYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIV 361
+ P V
Sbjct: 295 SNQSYPTPV 303
Score = 71.2 bits (173), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 106/259 (40%), Gaps = 57/259 (22%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTVNQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + D E W G NGQLG G + + P +V L
Sbjct: 206 --VVVTIACGQMCCMAVV------DTGEVYVW--GYNGNGQLGLGNSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
Q + + V CG HT V++ G V++WG N G L +GN
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQVYAWGA--------------NSYGQ-----LGTGNKS 295
Query: 309 HGPKFQDPVQV---------ACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTG 350
+ + PV V AC + HT G ++ WG RG+S +L T
Sbjct: 296 N-QSYPTPVTVEKDRIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTD 354
Query: 351 KTIDFFAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 355 DVFACFATPAVTWRLLSVE 373
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 62/133 (46%), Gaps = 20/133 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M +A+ + G +++WG + G L +S TP V G V
Sbjct: 207 VVTIACGQMCCMAVVDTGEVYVWG------YNGNGQLGLGNSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P + T +D
Sbjct: 261 RVACGYAHTLVLTDEGQVY--------AWGANSYGQLGTGNKSNQSYPTPV-TVEKDRII 311
Query: 191 AVYEVTCGSFHTA 203
+ C S HT+
Sbjct: 312 EI--AACHSTHTS 322
>sp|Q99LJ7|RCBT2_MOUSE RCC1 and BTB domain-containing protein 2 OS=Mus musculus GN=Rcbtb2
PE=2 SV=1
Length = 551
Score = 89.4 bits (220), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 31/250 (12%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGS-EHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
S+ P + G + ++ GS H+V + GE + +WG N QLG G
Sbjct: 85 STIEPRRLDSLTGKKIASLSYGSGPHIVLATTDGEVF--------TWGHNAYSQLGNGTT 136
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
L P I T S V EV CGS+H+ +LT E W G +GQ+G
Sbjct: 137 NHGLVPCHIST--NLSNKQVIEVACGSYHSLVLTSDG------EVFAW--GYNNSGQVGS 186
Query: 233 GTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRN 292
G+T + +P +V Q ++++ CG + V G+V+ WG N L
Sbjct: 187 GSTANQPIPRRVTGCLQNKVVMNIACGQMCSMAVVDTGEVYVWGYNG------NGQLGLG 240
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+G+ +P ++ G + Q +VACG AHT+++TD+G ++++WG G LGTG
Sbjct: 241 SSGNQPTPCRVAA--LQGIRVQ---RVACGYAHTLVLTDEG-QIYAWGANSYGQLGTGNK 294
Query: 353 IDFFAPAIVL 362
+ P V+
Sbjct: 295 SNQSYPTPVV 304
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 109/254 (42%), Gaps = 47/254 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H + L S GE + +WG NN+GQ+G G ++ P+ + Q+
Sbjct: 154 VIEVACGSYHSLVLTSDGEVF--------AWGYNNSGQVGSGSTANQPIPRRVTGCLQNK 205
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG + + D E W G NGQLG G++ + P +V L
Sbjct: 206 --VVMNIACGQMCSMAVV------DTGEVYVW--GYNGNGQLGLGSSGNQPTPCRVAAL- 254
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILIS 304
Q + + V CG HT V++ G +++WG G G N S +P+++
Sbjct: 255 QGIRVQRVACGYAHTLVLTDEGQIYAWGANSYGQLGTGNKSNQSYP--------TPVVVE 306
Query: 305 GNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDF 355
K + AC +AHT G ++ WG RG+S +L T
Sbjct: 307 -------KDRIIEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHHTHFCCTDDVFAC 359
Query: 356 FAPAIVLWPPLTEE 369
FA V W L+ E
Sbjct: 360 FATPAVTWRLLSVE 373
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 53/108 (49%), Gaps = 17/108 (15%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF---TPSPVWDFHGHTVV 130
+ ++ G M S+A+ + G +++WG + G L SS TP V G V
Sbjct: 207 VMNIACGQMCSMAVVDTGEVYVWG------YNGNGQLGLGSSGNQPTPCRVAALQGIRVQ 260
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP 178
+VACG H + L G+ Y +WGAN+ GQLG G++ ++ P
Sbjct: 261 RVACGYAHTLVLTDEGQIY--------AWGANSYGQLGTGNKSNQSYP 300
>sp|Q5GLZ8|HERC4_HUMAN Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens GN=HERC4
PE=1 SV=1
Length = 1057
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 113/276 (40%), Gaps = 45/276 (16%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
DGQLG GS I P +++ S I+I V G SLA+ A
Sbjct: 113 DGQLGLVGSEE----------CIRVPRNIKSLSD------IQIVQVACGYYHSLALSKAS 156
Query: 92 ALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKG 151
++ WG G +P + G ++VA G H L +G
Sbjct: 157 EVFCWGQNKYGQLGL--GTDCKKQTSPQLLKSLLGIPFMQVAAGGAHSFVLTLSG----- 209
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
+ WG N GQLGL D R P ++++ S VY + CG HTA LT
Sbjct: 210 ---AIFGWGRNKFGQLGLNDENDRYVPNLLKSLR--SQKIVY-ICCGEDHTAALTK---- 259
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV-VSSAG 270
E +TFG G GQLGH +T + P +V EL + + + CG HTS V S+G
Sbjct: 260 ----EGGVFTFGAGGYGQLGHNSTSHEINPRKVFELMGSI-VTEIACGRQHTSAFVPSSG 314
Query: 271 DVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGN 306
++S+ GL N L + SP + GN
Sbjct: 315 RIYSF------GLGGNGQLGTGSTSNRKSPFTVKGN 344
Score = 82.4 bits (202), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 131/297 (44%), Gaps = 50/297 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I +V G +LA+++ G ++ WG ++G LV S P + +
Sbjct: 86 IVAVSCGEAHTLALNDKGQVYAWG------LDSDGQLGLVGSEECIRVPRNIKSLSDIQI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKIIETFNQDS 188
V+VACG H +AL A E + WG N GQLGLG D + + P+++++
Sbjct: 140 VQVACGYYHSLALSKASEVF--------CWGQNKYGQLGLGTDCKKQTSPQLLKSL-LGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P+ +V G H+ +LT L + +G + GQLG VP +K L
Sbjct: 191 PFM--QVAAGGAHSFVLT--------LSGAIFGWGRNKFGQLGLNDENDRYVPNLLKSL- 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ +V + CG HT+ ++ G V+++G G G L N I+P +
Sbjct: 240 RSQKIVYICCGEDHTAALTKEGGVFTFGA-GGYG-----QLGHNSTSHEINPRKV----- 288
Query: 309 HGPKFQ----DPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
F+ ++ACG HT +++S+G G +G LGTG T + +P V
Sbjct: 289 ----FELMGSIVTEIACGRQHTSAFVPSSGRIYSFGLGGNGQLGTGSTSNRKSPFTV 341
Score = 68.9 bits (167), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/197 (31%), Positives = 90/197 (45%), Gaps = 33/197 (16%)
Query: 159 WGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
WG + GQLGLG D E L P+ + F V +V CG HT + + +
Sbjct: 4 WGNASFGQLGLGGIDEEIVLEPRKSDFFINKR---VRDVGCGLRHTVFV--------LDD 52
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G + GQLGH ++ PEQV L +V+V CG HT ++ G V++WG
Sbjct: 53 GTVYTCGCNDLGQLGHEKSRKK--PEQVVALDAQ-NIVAVSCGEAHTLALNDKGQVYAWG 109
Query: 277 MEKG--LGLCPNASLTRNEAG-DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
++ LGL + R ++S I I VQVACG H+ L
Sbjct: 110 LDSDGQLGLVGSEECIRVPRNIKSLSDIQI-------------VQVACGYYHS-LALSKA 155
Query: 334 YKLWSWGRGRSGVLGTG 350
+++ WG+ + G LG G
Sbjct: 156 SEVFCWGQNKYGQLGLG 172
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 17/132 (12%)
Query: 218 MCWTFGLGENGQLGHGTTQSALVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+CW G GQLG G +V E K + + V CGL HT V G V++ G
Sbjct: 2 LCW--GNASFGQLGLGGIDEEIVLEPRKSDFFINKRVRDVGCGLRHTVFVLDDGTVYTCG 59
Query: 277 MEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKL 336
L S + E A+ Q+ V V+CG AHT+ + D G ++
Sbjct: 60 CNDLGQLGHEKSRKKPEQVVALDA-------------QNIVAVSCGEAHTLALNDKG-QV 105
Query: 337 WSWGRGRSGVLG 348
++WG G LG
Sbjct: 106 YAWGLDSDGQLG 117
>sp|Q15034|HERC3_HUMAN Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens GN=HERC3
PE=1 SV=1
Length = 1050
Score = 87.4 bits (215), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 139/296 (46%), Gaps = 48/296 (16%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS----FTPSPVWDFHGHTV 129
I V G SLA+ + G L+ WG + ++G L+++ P + + T+
Sbjct: 86 IIHVACGESHSLALSDRGQLFSWG------AGSDGQLGLMTTEDSVAVPRLIQKLNQQTI 139
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDS 188
++V+CG+ H +AL + G+ + +WG N++GQLGLG S+ P+ + + +
Sbjct: 140 LQVSCGNWHCLALAADGQFF--------TWGKNSHGQLGLGKEFPSQASPQRVRSL-EGI 190
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
P A +V G H+ L+ L + +G+ GQLG + P VK L
Sbjct: 191 PLA--QVAAGGAHSFALS--------LSGAVFGWGMNNAGQLGLSDEKDRESPCHVK-LL 239
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP---ILISG 305
+ +V + CG HT+V++ +G V+++G G C L + D ++P + + G
Sbjct: 240 RTQKVVYISCGEEHTAVLTKSGGVFTFGA----GSC--GQLGHDSMNDEVNPRRVLELMG 293
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
+ + Q+ACG HT+ ++++G G G LGTG T + P+ V
Sbjct: 294 S--------EVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCNVKCPSPV 341
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 108/241 (44%), Gaps = 46/241 (19%)
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V +VACG H V L+ GE Y + G N GQLG +RE +I +Q
Sbjct: 35 SVKEVACGGNHSVFLLEDGEVY--------TCGLNTKGQLG-HEREGNKPEQIGALADQH 85
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKE 246
+ V CG H+ L+ R + +++G G +GQLG TT+ S VP +++
Sbjct: 86 ----IIHVACGESHSLALSDRGQ--------LFSWGAGSDGQLGLMTTEDSVAVPRLIQK 133
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLG--LCPNASLTRNEAGDAISP 300
L Q ++ V CG +H +++ G ++WG + GLG AS R + + I P
Sbjct: 134 LNQQT-ILQVSCGNWHCLALAADGQFFTWGKNSHGQLGLGKEFPSQASPQRVRSLEGI-P 191
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
+ QVA G AH+ ++ G ++ WG +G LG D +P
Sbjct: 192 L---------------AQVAAGGAHSFALSLSG-AVFGWGMNNAGQLGLSDEKDRESPCH 235
Query: 361 V 361
V
Sbjct: 236 V 236
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 75/175 (42%), Gaps = 23/175 (13%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
I + V AGG S A+ +GA++ WG + ++ G +P V VV
Sbjct: 190 IPLAQVAAGGAHSFALSLSGAVFGWG---MNNAGQLGLSDEKDRESPCHVKLLRTQKVVY 246
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPK-IIETFNQDSPW 190
++CG EH L +G + ++GA + GQLG + P+ ++E +
Sbjct: 247 ISCGEEHTAVLTKSGGVF--------TFGAGSCGQLGHDSMNDEVNPRRVLELMGSE--- 295
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
V ++ CG HT P+ + + FG G GQLG G T + P VK
Sbjct: 296 -VTQIACGRQHTLAFV----PSS---GLIYAFGCGARGQLGTGHTCNVKCPSPVK 342
>sp|Q6NXM2|RCBT1_MOUSE RCC1 and BTB domain-containing protein 1 OS=Mus musculus GN=Rcbtb1
PE=2 SV=1
Length = 531
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 29/249 (11%)
Query: 114 SSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE 173
S+ P + G + ++ GS V L + ED V Y+WG N QLG G
Sbjct: 61 STLVPKKLEALCGKKIKSLSYGSGPHVLLTT-------EDGVVYAWGHNGYSQLGNGTTN 113
Query: 174 SRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG 233
+ P ++ V EV CGS H+ L + + +G GQ+G G
Sbjct: 114 QGIAP--VQVCTNLLIKQVIEVACGSHHSMALA--------ADGELFAWGYNNCGQVGSG 163
Query: 234 TTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNE 293
+T + P +V +V++ CG + V +G+V+ WG N L
Sbjct: 164 STANQPTPRKVTNCLHTKRVVNIACGQTSSMAVLDSGEVYGWGYNG------NGQLGLGN 217
Query: 294 AGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI 353
G+ ++P+ ++ HG Q+ CG AHT+ +TD+G L++WG G LGTG
Sbjct: 218 NGNQLTPVRVA--ALHGMCVN---QIVCGYAHTLALTDEGL-LYAWGANTYGQLGTGSKN 271
Query: 354 DFFAPAIVL 362
+ +P ++
Sbjct: 272 NLLSPTQIM 280
Score = 82.4 bits (202), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 67/224 (29%), Positives = 100/224 (44%), Gaps = 38/224 (16%)
Query: 70 APIKICS---------VKAGGMMSLAIDNAGALWMWG--NCPLPDSSTEGGFSLVSSFTP 118
AP+++C+ V G S+A+ G L+ WG NC G S + TP
Sbjct: 117 APVQVCTNLLIKQVIEVACGSHHSMALAADGELFAWGYNNC-----GQVGSGSTANQPTP 171
Query: 119 SPVWD-FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
V + H VV +ACG +A++ +GE Y WG N NGQLGLG+ ++L
Sbjct: 172 RKVTNCLHTKRVVNIACGQTSSMAVLDSGEVY--------GWGYNGNGQLGLGNNGNQLT 223
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P + + V ++ CG HT LT E + + +G GQLG G+ +
Sbjct: 224 PVRVAALH---GMCVNQIVCGYAHTLALTD--------EGLLYAWGANTYGQLGTGSKNN 272
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVV-SSAGDVWSWGMEKG 280
L P Q+ + V ++ C HTS + G V+ WG +G
Sbjct: 273 LLSPTQIMVEKERVIEIAA-CHSTHTSAAKTQGGHVYMWGQCRG 315
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 116/281 (41%), Gaps = 41/281 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLTTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
V++VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VIEVACGSHHSMALAADGELF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 TKRVVNIACGQ------TSSMAVLDSGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
+ + + CG HT ++ G +++WG T + G L+S
Sbjct: 231 HGMCVNQIVCGYAHTLALTDEGLLYAWGAN-----------TYGQLGTGSKNNLLSPTQI 279
Query: 309 HGPKFQDPVQVACGAAHTVLVTDDGYKLWSWG--RGRSGVL 347
K + AC + HT G ++ WG RG+S +L
Sbjct: 280 MVEKERVIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL 320
Score = 50.4 bits (119), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEALCGKKIKSLSYGSGP-HVLLTTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + ++VACG+ H++ + DG +L++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVIEVACGSHHSMALAADG-ELFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>sp|Q92834|RPGR_HUMAN X-linked retinitis pigmentosa GTPase regulator OS=Homo sapiens
GN=RPGR PE=1 SV=2
Length = 1020
Score = 85.1 bits (209), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 127/278 (45%), Gaps = 50/278 (17%)
Query: 80 GGMMSLAIDNAGALWM-----WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVAC 134
G S + L+M WG L G S +S P+ V V AC
Sbjct: 43 GDEHSAVVTGNNKLYMFGSNNWGQLGL------GSKSAISK--PTCVKALKPEKVKLAAC 94
Query: 135 GSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYE 194
G H + G Y+ G NN GQLGLGD E R +I F S + +
Sbjct: 95 GRNHTLVSTEGGN--------VYATGGNNEGQLGLGDTEERNTFHVISFFT--SEHKIKQ 144
Query: 195 VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLV 254
++ GS +A LT R + +G GQ+G + VP+QV + + V +
Sbjct: 145 LSAGSNTSAALTEDGR--------LFMWGDNSEGQIGLKNVSNVCVPQQVT-IGKPVSWI 195
Query: 255 SVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAISPILISGNGPHGPK 312
S CG +H++ V++ G+++ +G E G LGL PN L G+ +P L+S P
Sbjct: 196 S--CGYYHSAFVTTDGELYVFGEPENGKLGL-PNQLL-----GNHRTPQLVS----EIP- 242
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ +QVACG HTV++T++ ++++G G+ G LG G
Sbjct: 243 -EKVIQVACGGEHTVVLTENA--VYTFGLGQFGQLGLG 277
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 122/279 (43%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F ++S FT H + +++
Sbjct: 100 LVSTEGGNVYATGGNNEGQLG------LGDTEERNTFHVISFFTSE-------HKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL ED + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALT--------EDGRLFMWGDNSEGQIGLKNVSNVCVPQQV-TIGKPVSW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T + + FG ENG+LG + + P+ V E+P+ V
Sbjct: 195 -ISCGYYHSAFVT--------TDGELYVFGEPENGKLGLPNQLLGNHRTPQLVSEIPEKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGEHT-VVLTENAVYTFGLGQFGQLGLGTFLFETSEPKVIENI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ Q ++CG HT L+TD G ++++G GR G LG G
Sbjct: 293 RDQTISYISCGENHTALITDIGL-MYTFGDGRHGKLGLG 330
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 42/222 (18%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G VS+ P V G V
Sbjct: 141 KIKQLSAGSNTSAALTEDGRLFMWGD----NSEGQIGLKNVSNVCVPQQVT--IGKPVSW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSP 189
++CG H + + GE Y +G NG+LGL ++ + P+++ P
Sbjct: 195 ISCGYYHSAFVTTDGE--------LYVFGEPENGKLGLPNQLLGNHRTPQLVSEI----P 242
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT----TQSALVPEQVK 245
V +V CG HT +LT E+ +TFGLG+ GQLG GT T V E ++
Sbjct: 243 EKVIQVACGGEHTVVLT---------ENAVYTFGLGQFGQLGLGTFLFETSEPKVIENIR 293
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ Q + +S CG HT++++ G ++++G + GLGL
Sbjct: 294 D--QTISYIS--CGENHTALITDIGLMYTFGDGRHGKLGLGL 331
>sp|Q8NDN9|RCBT1_HUMAN RCC1 and BTB domain-containing protein 1 OS=Homo sapiens GN=RCBTB1
PE=2 SV=1
Length = 531
Score = 83.6 bits (205), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 22/211 (10%)
Query: 152 EDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRP 211
ED V Y+WG N QLG G + P ++ V EV CGS H+ L
Sbjct: 92 EDGVVYAWGHNGYSQLGNGTTNQGIAP--VQVCTNLLIKQVVEVACGSHHSMALA----- 144
Query: 212 NDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGD 271
+ + +G GQ+G G+T + P +V +V + CG + V G+
Sbjct: 145 ---ADGEVFAWGYNNCGQVGSGSTANQPTPRKVTNCLHIKRVVGIACGQTSSMAVLDNGE 201
Query: 272 VWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
V+ WG N L G+ ++P+ ++ H Q+ CG AHT+ +TD
Sbjct: 202 VYGWGYNG------NGQLGLGNNGNQLTPVRVA--ALHSVCVN---QIVCGYAHTLALTD 250
Query: 332 DGYKLWSWGRGRSGVLGTGKTIDFFAPAIVL 362
+G L++WG G LGTG + +PA ++
Sbjct: 251 EGL-LYAWGANTYGQLGTGNKNNLLSPAHIM 280
Score = 69.7 bits (169), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 92/341 (26%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGN---CPLPDSSTEGGFSLVSSFTPSPVWDFHGHT 128
IK S +G + L+ ++ G ++ WG+ L + +T G + V T +
Sbjct: 76 IKSLSYGSGPHVLLSTED-GVVYAWGHNGYSQLGNGTTNQGIAPVQVCTNLLI-----KQ 129
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
VV+VACGS H +AL + GE + +WG NN GQ+G G ++ P+ + N
Sbjct: 130 VVEVACGSHHSMALAADGEVF--------AWGYNNCGQVGSGSTANQPTPRKVT--NCLH 179
Query: 189 PWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELP 248
V + CG T D E W G NGQLG G + L P +V L
Sbjct: 180 IKRVVGIACGQ------TSSMAVLDNGEVYGW--GYNGNGQLGLGNNGNQLTPVRVAAL- 230
Query: 249 QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGP 308
V + + CG HT ++ G +++WG L + +SP I
Sbjct: 231 HSVCVNQIVCGYAHTLALTDEGLLYAWGANT------YGQLGTGNKNNLLSPAHIM---- 280
Query: 309 HGPKFQDPVQVA-CGAAHTVLVTDDGYKLWSWG--RGRSGVL-------GTGKTIDFFAP 358
+ + V++A C +AHT G ++ WG RG+S +L T FA
Sbjct: 281 --VEKERVVEIAACHSAHTSAAKTQGGHVYMWGQCRGQSVILPHLTHFSCTDDVFACFAT 338
Query: 359 AIVLWPPLTEEFKQDELNTGGLDDEIKTKDLEGAEERDEKL 399
V W L+ E +D L E K+ + E D K
Sbjct: 339 PAVSWRLLSVE-HEDFLTVA----ESLKKEFDSPETADLKF 374
Score = 48.5 bits (114), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKEL-PQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ FGL + LG G QS LVP++++ L + + +S G H + + G V++WG
Sbjct: 44 FVFGLNYSNCLGTGDNQSTLVPKKLEGLCGKKIKSLSYGSGP-HVLLSTEDGVVYAWGHN 102
Query: 279 KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWS 338
+ L I+P+ + N + V+VACG+ H++ + DG ++++
Sbjct: 103 G------YSQLGNGTTNQGIAPVQVCTN----LLIKQVVEVACGSHHSMALAADG-EVFA 151
Query: 339 WGRGRSGVLGTGKTIDFFAPAIV 361
WG G +G+G T + P V
Sbjct: 152 WGYNNCGQVGSGSTANQPTPRKV 174
>sp|Q5DX34|RPGRH_CAEEL X-linked retinitis pigmentosa GTPase regulator homolog
OS=Caenorhabditis elegans GN=glo-4 PE=1 SV=1
Length = 1392
Score = 79.0 bits (193), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 101/226 (44%), Gaps = 40/226 (17%)
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V ++ G +ACG+EH++ L S+G+ +WG N GQ G+G +I
Sbjct: 770 VLEYPGGRPRAIACGAEHILVLSSSGQ--------LSAWGGNRFGQCGVGHSF-----RI 816
Query: 181 IETFNQDSPW-AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHG--TTQS 237
D W A+ ++ CG FH+A + + WTFG G GQLGHG +
Sbjct: 817 ANLHQVDGDWPAIEKIACGQFHSAFICS--------DGSLWTFGWGVWGQLGHGGRNNSN 868
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
LVP +V L + + CG HT V++ G V +C + S + D
Sbjct: 869 QLVPTRVNGL--ICKVTQIACGRAHTVVLTDTGRVL---------VCGSGSYGQMGVDDD 917
Query: 298 ISPILISGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRG 342
I + P GP + +D +A H++ +T+D +++ WGR
Sbjct: 918 IKKVFAFTPLPLGPLRVRD---IATHYYHSICITEDN-RVFEWGRN 959
Score = 56.6 bits (135), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 106/446 (23%), Positives = 181/446 (40%), Gaps = 92/446 (20%)
Query: 33 GQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGA 92
GQL G N C + I ++ D K + G S I + G+
Sbjct: 795 GQLSAWGGNRFGQCGVGHSFRIANLHQVDGDWPAIEK-------IACGQFHSAFICSDGS 847
Query: 93 LW-----MWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGE 147
LW +WG GG + + P+ V V ++ACG H V L G
Sbjct: 848 LWTFGWGVWGQL------GHGGRNNSNQLVPTRVNGLICK-VTQIACGRAHTVVLTDTGR 900
Query: 148 TYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTH 207
LVC G+ + GQ+G+ D ++ T P V ++ +H+ +T
Sbjct: 901 V-----LVC---GSGSYGQMGVDDD---IKKVFAFTPLPLGPLRVRDIATHYYHSICITE 949
Query: 208 RKR-------PNDMLESMCWTFGLGENGQLGHGTTQS------------------ALVPE 242
R P ++ M + + QL + S A +P
Sbjct: 950 DNRVFEWGRNPQELKMRM-FVMKKIRSAQLKNTEDPSSPSPSTNGSTPRVNLNLPAEIPR 1008
Query: 243 Q---VKELPQYV--YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
+ ++E+ ++ +VSV CGL H+++++S G +++WG KGL + L +
Sbjct: 1009 EDLGLREVKHFLDGNIVSVACGLSHSALITSEGTLYTWG--KGL----DYQLGHGNKNER 1062
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGR---GRSGVL--GTGKT 352
+ P + P+G K+ V V+ G HT+ TDDG +++WG+ G+ GVL G +
Sbjct: 1063 MEPHQVF--EPNGAKW---VNVSLGNNHTIASTDDG-SVFAWGKNDFGQCGVLTKKNGNS 1116
Query: 353 ID----FFAPA---IVLWPPLTE-EFKQDELNTGGLDDEIKTKDLEGAEERDEKLSSAME 404
D FF A P + E +F Q GL +++ ++L E+ +E +
Sbjct: 1117 ADVTKKFFFQARDGRRFMPNVDESQFVQKP----GLIPDVRVRNLN--EDGNEGVDKEEI 1170
Query: 405 EMKLLQSKLSVMERYASILHGSIFGK 430
+L S ++V++ + L+ I GK
Sbjct: 1171 VDRLKASDVNVVQAVSKHLYSPIEGK 1196
>sp|Q9N1T2|RPGR_CANFA X-linked retinitis pigmentosa GTPase regulator OS=Canis familiaris
GN=RPGR PE=2 SV=1
Length = 1003
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 113/257 (43%), Gaps = 45/257 (17%)
Query: 96 WGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLV 155
WG L ST + V + P V ACG H + G+
Sbjct: 64 WGQLGLGSKSTVSKPTCVKALKP--------EKVKFAACGRNHTLVSTEGGK-------- 107
Query: 156 CYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDML 215
Y+ G NN GQLGLGD E R +I F S + +++ GS +A LT
Sbjct: 108 VYAAGGNNEGQLGLGDTEERSTFHLISFFT--SQRKIKQLSAGSNTSAALTE-------- 157
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ + +G GQ+G + VP+QV + + + +S CG +H++ V++ G ++++
Sbjct: 158 DGELFMWGDNSEGQIGLENVTNVCVPQQVT-VGKPISWIS--CGYYHSAFVTTEGQLYTF 214
Query: 276 GMEK--GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDG 333
G + LGL PN L + + I VQVACG HTV++T+
Sbjct: 215 GEPECGKLGL-PNQLLVNHRMPQPVPGIPGK-----------VVQVACGGGHTVVLTEKA 262
Query: 334 YKLWSWGRGRSGVLGTG 350
++++G G+ G LG G
Sbjct: 263 --VYTFGLGQFGQLGLG 277
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 79/291 (27%), Positives = 126/291 (43%), Gaps = 52/291 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S + G + + +N G L L D+ F L+S FT + +++
Sbjct: 100 LVSTEGGKVYAAGGNNEGQLG------LGDTEERSTFHLISFFTSQ-------RKIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
GS AL GE + WG N+ GQ+GL + + P+ + T + W
Sbjct: 147 AGSNTSAALTEDGE--------LFMWGDNSEGQIGLENVTNVCVPQQV-TVGKPISW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T E +TFG E G+LG + + +P+ V +P V
Sbjct: 195 -ISCGYYHSAFVT--------TEGQLYTFGEPECGKLGLPNQLLVNHRMPQPVPGIPGKV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
V V CG HT V++ V+++G+ + L L AI I
Sbjct: 246 --VQVACGGGHTVVLTEKA-VYTFGLGQFGQLGLGTFLFETSVPKAIEHI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG--KTIDFFAPAI 360
K Q +ACG HT L+TD G ++++G GR G LG G + + F P +
Sbjct: 293 KDQKISFIACGENHTALITDMGL-MYTFGDGRHGKLGLGLENSTNQFIPTL 342
Score = 66.6 bits (161), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 101/218 (46%), Gaps = 34/218 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSF-TPSPVWDFHGHTVVK 131
KI + AG S A+ G L+MWG+ +S + G V++ P V G +
Sbjct: 141 KIKQLSAGSNTSAALTEDGELFMWGD----NSEGQIGLENVTNVCVPQQVT--VGKPISW 194
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
++CG H + + G+ Y + C G N QL + R + P I P
Sbjct: 195 ISCGYYHSAFVTTEGQLYTFGEPECGKLGLPN--QLLVNHRMPQPVPGI--------PGK 244
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQ-SALVPEQVKELP-Q 249
V +V CG HT +LT E +TFGLG+ GQLG GT VP+ ++ + Q
Sbjct: 245 VVQVACGGGHTVVLT---------EKAVYTFGLGQFGQLGLGTFLFETSVPKAIEHIKDQ 295
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGL 283
+ ++ CG HT++++ G ++++G + GLGL
Sbjct: 296 KISFIA--CGENHTALITDMGLMYTFGDGRHGKLGLGL 331
Score = 58.2 bits (139), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 103/246 (41%), Gaps = 57/246 (23%)
Query: 32 DGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAG 91
+GQ+G ++ CV +Q +T+G P I + G S + G
Sbjct: 169 EGQIGLENVTNV--CVPQQ-VTVGKP----------------ISWISCGYYHSAFVTTEG 209
Query: 92 ALWMWGNCP-----LPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAG 146
L+ +G LP+ LV+ P PV G VV+VACG H V L
Sbjct: 210 QLYTFGEPECGKLGLPNQL------LVNHRMPQPVPGIPGK-VVQVACGGGHTVVLT--- 259
Query: 147 ETYKGEDLVCYSWGANNNGQLGLGDR--ESRLRPKIIETFNQDSPWAVYEVTCGSFHTAL 204
+ Y++G GQLGLG E+ + PK IE + + CG HTAL
Sbjct: 260 ------EKAVYTFGLGQFGQLGLGTFLFETSV-PKAIEHIKD---QKISFIACGENHTAL 309
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA--LVPEQVKELPQYVYLVSVDCGLFH 262
+T DM + +TFG G +G+LG G S +P +++ + V CG H
Sbjct: 310 IT------DM--GLMYTFGDGRHGKLGLGLENSTNQFIPTLCSNFLRFIVQL-VSCGGCH 360
Query: 263 TSVVSS 268
T V ++
Sbjct: 361 TLVFAT 366
>sp|Q9R0X5|RPGR_MOUSE X-linked retinitis pigmentosa GTPase regulator OS=Mus musculus
GN=Rpgr PE=1 SV=2
Length = 1001
Score = 76.3 bits (186), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 76/279 (27%), Positives = 124/279 (44%), Gaps = 50/279 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S GG+ + +N G L L D+ F + FTP+ T+ +++
Sbjct: 100 LVSTDTGGVYAAGGNNEGQLG------LGDTDDRDTFHQIVFFTPA-------DTIKQLS 146
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
G+ AL ED + WG N+ GQ+GL D+ + P + T + W
Sbjct: 147 AGANTSAALT--------EDGKLFMWGDNSEGQIGLEDKSNVCIPHEV-TVGKPISW--- 194
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPEQVKELPQYV 251
++CG +H+A +T ++ +TFG ENG+LG + + P++V +P+ V
Sbjct: 195 -ISCGYYHSAFVT--------MDGELYTFGEPENGKLGLPNELLMNHRSPQRVLGIPERV 245
Query: 252 YLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+ V CG HT VV + V+++G+ + L L I I
Sbjct: 246 --IQVACGGGHT-VVLTEKVVYAFGLGQFGQLGLGTFLFETSEPKIIERI---------- 292
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
K Q ++CG HT L+T+ G L+++G GR G LG G
Sbjct: 293 KDQKICHISCGENHTALMTELGL-LYTFGDGRHGKLGLG 330
Score = 67.4 bits (163), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/291 (25%), Positives = 127/291 (43%), Gaps = 55/291 (18%)
Query: 69 KAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFH 125
K I IC + G + + L+M+G S+ G L S P+ +
Sbjct: 33 KNDIPIC-LSCGDEHTAIVTGNNKLYMFG------SNNWGQLGLGSKAAIIKPTCIKALK 85
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
V ACG H + G Y+ G NN GQLGLGD + R +TF+
Sbjct: 86 PEKVKLAACGRNHTLVSTDTG--------GVYAAGGNNEGQLGLGDTDDR------DTFH 131
Query: 186 Q----DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
Q + +++ G+ +A LT + + +G GQ+G + +P
Sbjct: 132 QIVFFTPADTIKQLSAGANTSAALTEDGK--------LFMWGDNSEGQIGLEDKSNVCIP 183
Query: 242 EQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EKG-LGLCPNASLTRNEAGDAIS 299
+V + + + +S CG +H++ V+ G+++++G E G LGL PN L + + +
Sbjct: 184 HEVT-VGKPISWIS--CGYYHSAFVTMDGELYTFGEPENGKLGL-PNELLMNHRSPQRVL 239
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
I + +QVACG HTV++T+ ++++G G+ G LG G
Sbjct: 240 GIP-----------ERVIQVACGGGHTVVLTEK--VVYAFGLGQFGQLGLG 277
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 96/234 (41%), Gaps = 40/234 (17%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLR 177
PS W F + ++CG EH A+V+ Y +G+NN GQLGLG + + ++
Sbjct: 27 PSKFW-FKNDIPICLSCGDEHT-AIVTGNNK-------LYMFGSNNWGQLGLGSKAAIIK 77
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P I+ P V CG HT + T + G GQLG G T
Sbjct: 78 PTCIKAL---KPEKVKLAACGRNHTLVSTDT--------GGVYAAGGNNEGQLGLGDTDD 126
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG--MEKGLGLCPNASLTRNEAG 295
Q+ + + G ++ ++ G ++ WG E +GL
Sbjct: 127 RDTFHQIVFFTPADTIKQLSAGANTSAALTEDGKLFMWGDNSEGQIGL------------ 174
Query: 296 DAISPILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ S + I PH P+ ++CG H+ VT DG +L+++G +G LG
Sbjct: 175 EDKSNVCI----PHEVTVGKPISWISCGYYHSAFVTMDG-ELYTFGEPENGKLG 223
>sp|P18754|RCC1_HUMAN Regulator of chromosome condensation OS=Homo sapiens GN=RCC1 PE=1
SV=1
Length = 421
Score = 76.3 bits (186), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 93/333 (27%), Positives = 140/333 (42%), Gaps = 48/333 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 130
K+ V AG + A+ + G +++WG+ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTDDGRVFLWGSF----RDNNGVIGLLEPMKKSMVPVQVQLDVPVV 175
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 181
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTADGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 229
Query: 182 ETFNQDSPWAV--YEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
++ S V + CG++ T ++H E + FGL QLG T+S
Sbjct: 230 MLKSRGSRGHVRFQDAFCGAYFTFAISH--------EGHVYGFGLSNYHQLGTPGTESCF 281
Query: 240 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+P+ + V G HT + S G +S LG L E +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS------LGRAEYGRLGLGEGAEEK 335
Query: 299 S-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
S P LIS + VACGA+ VT DG ++++WG G + LGTG+ D ++
Sbjct: 336 SIPTLIS-------RLPAVSSVACGASVGYAVTKDG-RVFAWGMGTNYQLGTGQDEDAWS 387
Query: 358 PAIVLWPPLTEEFKQDELNTGGLDDEIKTKDLE 390
P ++ L E +++GG + KD E
Sbjct: 388 PVEMMGKQL-ENRVVLSVSSGGQHTVLLVKDKE 419
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 70/147 (47%), Gaps = 20/147 (13%)
Query: 205 LTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTS 264
++HR + + T G G+ GQLG G + +P+ V V + G HT
Sbjct: 25 VSHRSHSTE--PGLVLTLGQGDVGQLGLGENVMERKKPALVSIPEDV--VQAEAGGMHTV 80
Query: 265 VVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP-VQVACGA 323
+S +G V+S+G L + S+ +E ++ G + Q+ VQV+ G
Sbjct: 81 CLSKSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGK----VELQEKVVQVSAGD 128
Query: 324 AHTVLVTDDGYKLWSWG--RGRSGVLG 348
+HT +TDDG +++ WG R +GV+G
Sbjct: 129 SHTAALTDDG-RVFLWGSFRDNNGVIG 154
>sp|Q86SG6|NEK8_HUMAN Serine/threonine-protein kinase Nek8 OS=Homo sapiens GN=NEK8 PE=1
SV=1
Length = 692
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 86/322 (26%), Positives = 140/322 (43%), Gaps = 49/322 (15%)
Query: 38 SGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWG 97
+G SL+P +EQ LE S + I V G + + + G + +G
Sbjct: 363 AGGGSLLPGAVEQPQPQFISRFLEGQSG------VTIKHVACGDFFTACLTDRGIIMTFG 416
Query: 98 NCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCY 157
+ + G SL P+ V G+ +V+VACG+ HV+AL + E +
Sbjct: 417 SG---SNGCLGHGSLTDISQPTIVEALLGYEMVQVACGASHVLALSTEREL--------F 465
Query: 158 SWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLES 217
+WG ++G+LGLG RES P+ + V CG + +LT P L
Sbjct: 466 AWGRGDSGRLGLGTRESHSCPQQVP---MPPGQEAQRVVCGIDSSMILT---VPGQALA- 518
Query: 218 MCWTFGLGENGQLGHGTTQSALVP-EQVKELPQYVY----------LVSVDCGLFHTSVV 266
C + + G L H + VP +QV+E + L+S+D G H++ V
Sbjct: 519 -CGSNRFNKLG-LDHLSLGEEPVPHQQVEEALSFTLLGSAPLDQEPLLSIDLGTAHSAAV 576
Query: 267 SSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHT 326
+++GD +++G + + L N + +P + G G K VACG A T
Sbjct: 577 TASGDCYTFGSNQ------HGQLGTNTRRGSRAPCKVQGL--EGIKM---AMVACGDAFT 625
Query: 327 VLVTDDGYKLWSWGRGRSGVLG 348
V + + +++SWG+G G LG
Sbjct: 626 VAIGAES-EVYSWGKGARGRLG 646
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 52/118 (44%), Gaps = 12/118 (10%)
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
V + V CG F T+ ++ G + ++G N L D P ++ +
Sbjct: 391 VTIKHVACGDFFTACLTDRGIIMTFGSGS------NGCLGHGSLTDISQPTIVEALLGY- 443
Query: 311 PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTE 368
+ VQVACGA+H VL +L++WGRG SG LG G P V PP E
Sbjct: 444 ----EMVQVACGASH-VLALSTERELFAWGRGDSGRLGLGTRESHSCPQQVPMPPGQE 496
Score = 40.0 bits (92), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 34/131 (25%), Positives = 56/131 (42%), Gaps = 13/131 (9%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVA 133
+ S+ G S A+ +G + +G+ G + S P V G + VA
Sbjct: 563 LLSIDLGTAHSAAVTASGDCYTFGSN---QHGQLGTNTRRGSRAPCKVQGLEGIKMAMVA 619
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVY 193
CG VA+ + E Y SWG G+LG D ++ L P+ ++ ++ P+ V
Sbjct: 620 CGDAFTVAIGAESEVY--------SWGKGARGRLGRRDEDAGL-PRPVQ-LDETHPYTVT 669
Query: 194 EVTCGSFHTAL 204
V+C +T L
Sbjct: 670 SVSCCHGNTLL 680
>sp|Q6NYE2|RCC2_DANRE Protein RCC2 homolog OS=Danio rerio GN=rcc2 PE=2 SV=1
Length = 495
Score = 73.9 bits (180), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 98/226 (43%), Gaps = 42/226 (18%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
+SWG N+ GQLG GD + PK+IE ++ + CG HT LT
Sbjct: 145 WSWGRNDKGQLGHGDTKRLEAPKLIEGLGEE---VIVAAACGRNHTLALTE--------N 193
Query: 217 SMCWTFGLGENGQLGHGT-TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+TFG + GQLG G T + L P ++ Q + V V CG + +V G+++S+
Sbjct: 194 GTVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQPI--VKVACGAEFSMIVDCKGNLYSF 251
Query: 276 GMEKGLGLCPN-ASLTRNEAGDAIS---------PILISGNGPHGPKFQD----PV---- 317
G CP L N G I+ ++ K +D PV
Sbjct: 252 G-------CPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEKTKDGQVLPVPNVV 304
Query: 318 --QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VACGA HT LV D +++SWG G G LG + D P +V
Sbjct: 305 ARDVACGANHT-LVLDSQKRVFSWGFGGYGRLGHAEQKDEMVPRLV 349
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 71/144 (49%), Gaps = 13/144 (9%)
Query: 216 ESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSW 275
E W++G + GQLGHG T+ P+ ++ L + V +V+ CG HT ++ G V+++
Sbjct: 141 EGKLWSWGRNDKGQLGHGDTKRLEAPKLIEGLGEEV-IVAAACGRNHTLALTENGTVYTF 199
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
G E LG N+ +SP I NG Q V+VACGA +++V G
Sbjct: 200 G-ENKLGQLGQG----NQTDAVLSPATIQYNG------QPIVKVACGAEFSMIVDCKG-N 247
Query: 336 LWSWGRGRSGVLGTGKTIDFFAPA 359
L+S+G G LG F A A
Sbjct: 248 LYSFGCPEYGQLGHNSDGKFIARA 271
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/244 (26%), Positives = 92/244 (37%), Gaps = 53/244 (21%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
SL I G LW WG D G P + +V ACG H +AL
Sbjct: 135 SLIITTEGKLWSWGR---NDKGQLGHGDTKRLEAPKLIEGLGEEVIVAAACGRNHTLALT 191
Query: 144 SAGETYKGEDLVCYSWGANNNGQLGLGDR-ESRLRPKIIETFNQDSPWAVYEVTCGSFHT 202
G Y++G N GQLG G++ ++ L P I+ Q + +V CG+ +
Sbjct: 192 ENG--------TVYTFGENKLGQLGQGNQTDAVLSPATIQYNGQ----PIVKVACGAEFS 239
Query: 203 ALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE-----LPQYVYLV--- 254
++ + ++FG E GQLGH + + Q E +P+ V +
Sbjct: 240 MIVD--------CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEFDCELIPRRVAIFIEK 291
Query: 255 ---------------SVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS 299
V CG HT V+ S V+SWG G G L E D +
Sbjct: 292 TKDGQVLPVPNVVARDVACGANHTLVLDSQKRVFSWGF-GGYG-----RLGHAEQKDEMV 345
Query: 300 PILI 303
P L+
Sbjct: 346 PRLV 349
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 307 GPHGPKFQDPVQVAC-----GAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
GPH VQV+C AAH++++T +G KLWSWGR G LG G T AP ++
Sbjct: 111 GPHRYGCLSDVQVSCVVSGPCAAHSLIITTEG-KLWSWGRNDKGQLGHGDTKRLEAPKLI 169
Score = 33.9 bits (76), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 67/151 (44%), Gaps = 37/151 (24%)
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ H + L S + SWG G+LG +++ + P++++ F+ A
Sbjct: 308 VACGANHTLVLDSQKRVF--------SWGFGGYGRLGHAEQKDEMVPRLVKLFDFPGRGA 359
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL-----GHGTTQSALVPEQVKE 246
++ CG C +F L E G L + + +S + P+ V++
Sbjct: 360 T-QIYCG------------------YQC-SFALSEMGGLFFWGVTNTSRESTMYPKAVQD 399
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGD-VWSWG 276
L + + S+ CG +S++ +A D SWG
Sbjct: 400 LCGW-KIRSLACG--KSSIIVAADDSTISWG 427
>sp|F2Z461|HERC6_MOUSE E3 ISG15--protein ligase Herc6 OS=Mus musculus GN=Herc6 PE=2 SV=1
Length = 1003
Score = 72.8 bits (177), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 128/296 (43%), Gaps = 52/296 (17%)
Query: 63 DSKTNHKAPIKICS------VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS-- 114
D T PI+ + V G S+A+ + G ++ WG + +EG +
Sbjct: 59 DQSTERPEPIQALNDLHVDLVSCGKEHSVAVCHKGKVFAWG------AGSEGQLGIGEFK 112
Query: 115 --SFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-D 171
SF P+ + G +++V+CG H +AL ED +SWG N+ GQLGLG +
Sbjct: 113 EISFMPTKIKALAGIKIIQVSCGHYHSLAL--------SEDGHVFSWGRNSEGQLGLGKN 164
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL- 230
S+ P+ +++ + P A +V G H+ L+ L + +G +GQL
Sbjct: 165 SRSQAIPQKVKSL-EGIPLA--QVAAGGTHSFALS--------LTGTSFGWGSNRSGQLA 213
Query: 231 --GHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNAS 288
G+ + P + L + + ++ + CG HT+V++ G V+++G L P+
Sbjct: 214 LSGNKVKEQIYKPHSIGAL-KNLSVIYISCGYEHTAVLTEEGQVFTFGGNSSGQLQPSPR 272
Query: 289 LTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRS 344
+ P LI G G Q+ C + HT+ ++ S GRG S
Sbjct: 273 SGQR------GPQLIEGIGGRVS------QIECASYHTIAYVYTTGQVVSLGRGPS 316
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/227 (29%), Positives = 101/227 (44%), Gaps = 38/227 (16%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G +++ A G H + L S Y S G N+ GQLG +S RP+ I+ N
Sbjct: 21 GIELLQAASGEHHSLLLFSNHRVY--------SCGDNSWGQLGQRRDQSTERPEPIQALN 72
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS-ALVPEQV 244
V V+CG H+ + H+ + + +G G GQLG G + + +P ++
Sbjct: 73 D---LHVDLVSCGKEHSVAVCHKGK--------VFAWGAGSEGQLGIGEFKEISFMPTKI 121
Query: 245 KELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPIL 302
K L + ++ V CG +H+ +S G V+SWG E LG L +N AI +
Sbjct: 122 KALAG-IKIIQVSCGHYHSLALSEDGHVFSWGRNSEGQLG------LGKNSRSQAIPQKV 174
Query: 303 ISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
S G P+ QVA G H+ ++ G + WG RSG L
Sbjct: 175 KSLEGI-------PLAQVAAGGTHSFALSLTGTS-FGWGSNRSGQLA 213
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 75/167 (44%), Gaps = 32/167 (19%)
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGEN--GQLGHGTTQSALVPEQVKELPQ 249
+ + G H+ LL R + G+N GQLG QS PE ++ L
Sbjct: 24 LLQAASGEHHSLLLFSNHR----------VYSCGDNSWGQLGQRRDQSTERPEPIQALND 73
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISG 305
+++ V CG H+ V G V++WG + G+G S + A++ I I
Sbjct: 74 -LHVDLVSCGKEHSVAVCHKGKVFAWGAGSEGQLGIGEFKEISFMPTKI-KALAGIKI-- 129
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
+QV+CG H++ +++DG+ ++SWGR G LG GK
Sbjct: 130 -----------IQVSCGHYHSLALSEDGH-VFSWGRNSEGQLGLGKN 164
>sp|P23800|RCC1_MESAU Regulator of chromosome condensation OS=Mesocricetus auratus
GN=RCC1 PE=1 SV=1
Length = 421
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 84/301 (27%), Positives = 124/301 (41%), Gaps = 47/301 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 130
K+ V AG + A+ G +++WG+ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSF----RDNNGVIGLLEPMKKSMVPVQVQLDMPVV 175
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 181
KVA G++H+V L + G+ Y L C G AN G+ GL E L PK +
Sbjct: 176 KVASGNDHLVMLTTDGDLYT---LGCGEQGQLGRVPELFANRGGRQGL---ERLLVPKCV 229
Query: 182 ETFNQDSPWAVY--EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSAL 239
++ S V + CG++ T ++ E + FGL QLG T S
Sbjct: 230 LLKSRGSRGRVRFQDAFCGAYLTFAISR--------EGHVYGFGLSNYHQLGTPGTASCF 281
Query: 240 VPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAI 298
+P+ + V G HT + S G +S LG L E +
Sbjct: 282 IPQNLTSFKNSTKSWVGFSGGQHHTICMDSEGKAYS------LGRAEYGRLGLGEGAEEK 335
Query: 299 S-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
S P LIS + VACGA+ V+ DG ++++WG G + LGTG+ D ++
Sbjct: 336 SIPTLIS-------RLPVVSSVACGASVGYAVSKDG-RVFAWGMGTNYQLGTGQDEDAWS 387
Query: 358 P 358
P
Sbjct: 388 P 388
Score = 44.3 bits (103), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 70/145 (48%), Gaps = 21/145 (14%)
Query: 206 THRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSV 265
+H+ P + T G G+ GQLG G +S L ++ +P +V + G HT
Sbjct: 29 SHKTEPG-----LVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTVC 81
Query: 266 VSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAH 325
++ +G V+S+G L + S+ +E ++ G K VQV+ G +H
Sbjct: 82 LNQSGQVYSFGCNDEGALGRDTSVEGSE--------MVPGKVELQEKV---VQVSAGDSH 130
Query: 326 TVLVTDDGYKLWSWG--RGRSGVLG 348
T +T+DG +++ WG R +GV+G
Sbjct: 131 TAALTEDG-RVFLWGSFRDNNGVIG 154
>sp|P28745|RCC1_SCHPO Protein pim1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pim1 PE=1 SV=2
Length = 539
Score = 67.4 bits (163), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 131/315 (41%), Gaps = 52/315 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ V ++ AI + G + WG D G+S T P + +
Sbjct: 174 LRVTKVICSDNLTAAITDNGCCFTWGTFRCSDGVL--GYSDSQKRTAEPTQ-MRLPEICQ 230
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR----LRPKIIETFNQD 187
+A G++H++AL + G+ Y+WG QLG E R L P+ + N
Sbjct: 231 LATGTDHIIALTTTGK--------VYTWGNGQQFQLGRRMLERRRLQGLTPQPLALKN-- 280
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG---HGTTQSALV--PE 242
+ V GS+H+ + ++ R + +GL Q G + A++ P
Sbjct: 281 ----IISVGAGSYHSFAIDNKGR--------VYAWGLNITRQCGIEVEDEEEGAVITKPT 328
Query: 243 QVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNA---SLTRNEAGDA 297
V L Y + S+ G HT + G V +WG + LG+ NA ++ ++E G+
Sbjct: 329 LVDALEGY-NVKSITGGEHHTLALLEDGRVLAWGRDDRHQLGIPDNALPETVVKDEKGNN 387
Query: 298 I---SPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTI- 353
+P +I P + +QV CG H + VT DG K++SWG + +G G
Sbjct: 388 YYLSTPTII-------PGLTNVIQVVCGTHHNLAVTSDG-KVYSWGSAENYEVGQGDNDE 439
Query: 354 DFFAPAIVLWPPLTE 368
D P +V + E
Sbjct: 440 DVAVPTLVRSKAIKE 454
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 67/293 (22%), Positives = 115/293 (39%), Gaps = 47/293 (16%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCP-------LPDSSTEGGFSLVSSF---TPSPV 121
+ + + GGM S A+ + G ++ WG D E G + + TPS V
Sbjct: 108 VGVVDLAVGGMHSAALSHDGRVYTWGVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKV 167
Query: 122 WDFHGH-TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGAN--NNGQLGLGDRESRLRP 178
H V KV C A+ G C++WG ++G LG D + R
Sbjct: 168 EGALSHLRVTKVICSDNLTAAITDNG--------CCFTWGTFRCSDGVLGYSDSQKR--- 216
Query: 179 KIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
E P + ++ G+ H LT + +T+G G+ QLG +
Sbjct: 217 -TAEPTQMRLP-EICQLATGTDHIIALTTTGK--------VYTWGNGQQFQLGRRMLERR 266
Query: 239 LVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME--KGLGLCPNASLTRNEAGD 296
+ + ++SV G +H+ + + G V++WG+ + G+ + E G
Sbjct: 267 RLQGLTPQPLALKNIISVGAGSYHSFAIDNKGRVYAWGLNITRQCGI----EVEDEEEGA 322
Query: 297 AIS-PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
I+ P L+ + K + G HT+ + +DG ++ +WGR LG
Sbjct: 323 VITKPTLVDALEGYNVK-----SITGGEHHTLALLEDG-RVLAWGRDDRHQLG 369
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 63/274 (22%), Positives = 94/274 (34%), Gaps = 78/274 (28%)
Query: 30 CMDGQLGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDN 89
C DG LG+S S T + P +IC + G +A+
Sbjct: 203 CSDGVLGYSDSQKRTA------------------EPTQMRLP-EICQLATGTDHIIALTT 243
Query: 90 AGALWMWGNCPLPDSSTEGGFSL---------VSSFTPSPVWDFHGHTVVKVACGSEHVV 140
G ++ WGN F L + TP P ++ V GS H
Sbjct: 244 TGKVYTWGNGQQ--------FQLGRRMLERRRLQGLTPQP---LALKNIISVGAGSYHSF 292
Query: 141 ALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-----LRPKIIETFNQDSPWAVYEV 195
A+ + G Y+WG N Q G+ + +P +++ + V +
Sbjct: 293 AIDNKGR--------VYAWGLNITRQCGIEVEDEEEGAVITKPTLVDALEG---YNVKSI 341
Query: 196 TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE--------- 246
T G HT L R + W G + QLG +AL VK+
Sbjct: 342 TGGEHHTLALLEDGR------VLAW--GRDDRHQLG--IPDNALPETVVKDEKGNNYYLS 391
Query: 247 ----LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+P ++ V CG H V+S G V+SWG
Sbjct: 392 TPTIIPGLTNVIQVVCGTHHNLAVTSDGKVYSWG 425
Score = 35.4 bits (80), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 58/138 (42%), Gaps = 9/138 (6%)
Query: 219 CWTFGLGENGQLGHGTTQSALV--PEQVKELP-QYVYLVSVDCGLFHTSVVSSAGDVWSW 275
+ FG G +LG G + +V P L V +V + G H++ +S G V++W
Sbjct: 73 VYVFGSGSMNELGMGEEEMDVVYRPRLNPILSTDKVGVVDLAVGGMHSAALSHDGRVYTW 132
Query: 276 GMEKGLGLCPNASLTRNEAGDAISPILISGNGPH---GPKFQDPVQVACGAAHTVLVTDD 332
G+ L ++E GD + L+ G +V C T +TD+
Sbjct: 133 GVNDDYALGRLTKDQKDENGDKVDNDLLEGTPSKVEGALSHLRVTKVICSDNLTAAITDN 192
Query: 333 GYKLWSWG--RGRSGVLG 348
G ++WG R GVLG
Sbjct: 193 GC-CFTWGTFRCSDGVLG 209
>sp|Q8VE37|RCC1_MOUSE Regulator of chromosome condensation OS=Mus musculus GN=Rcc1 PE=1
SV=1
Length = 421
Score = 66.2 bits (160), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 81/299 (27%), Positives = 122/299 (40%), Gaps = 43/299 (14%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 130
K+ V AG + A+ G +++WG+ G L+ S PV VV
Sbjct: 120 KVVQVSAGDSHTAALTEDGRVFLWGSF----RDNNGVIGLLEPMKKSMVPVQVQLDAPVV 175
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWG---------ANNNGQLGLGDRESRLRPKII 181
KVA G++H+V L + G+ Y L C G AN G+ GLG R R ++
Sbjct: 176 KVASGNDHLVMLTNDGDLYT---LGCGEQGQLGRVPELFANRGGRQGLG-RLLVPRCVLL 231
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
++ + CG++ T ++ E + FGL QLG T S +P
Sbjct: 232 KSRGTRGRVRFQDAFCGAYFTFAISR--------EGHVYGFGLSNYHQLGTPGTGSCFIP 283
Query: 242 EQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAIS- 299
+ + V G HT + S G +S LG L E + S
Sbjct: 284 QNLTSFKNSTKSWVGFSGGQHHTVCMDSEGKAYS------LGRAEYGRLGLGEGAEEKSI 337
Query: 300 PILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAP 358
P LIS + VACGA+ V+ DG ++++WG G + LGTG+ D ++P
Sbjct: 338 PTLIS-------RLPVVSSVACGASVGYAVSKDG-RVFAWGMGTNYQLGTGQDEDAWSP 388
Score = 45.1 bits (105), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSA 269
R ++ + T G G+ GQLG G +S L ++ +P +V + G HT +S +
Sbjct: 28 RSHNTEPGLVLTLGQGDVGQLGLG--ESVLERKKPALVPLLQDVVQAEAGGMHTVCLSQS 85
Query: 270 GDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDP-VQVACGAAHTVL 328
G V+S+G L + S+ +E ++ G + Q+ VQV+ G +HT
Sbjct: 86 GQVYSFGCNDEGALGRDTSVEGSE--------MVPGK----VELQEKVVQVSAGDSHTAA 133
Query: 329 VTDDGYKLWSWG--RGRSGVLG 348
+T+DG +++ WG R +GV+G
Sbjct: 134 LTEDG-RVFLWGSFRDNNGVIG 154
Score = 35.8 bits (81), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 75/189 (39%), Gaps = 30/189 (15%)
Query: 80 GGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV--VKVACGSE 137
G + AI G ++ +G L + G S F P + F T V + G
Sbjct: 248 GAYFTFAISREGHVYGFG---LSNYHQLGTPGTGSCFIPQNLTSFKNSTKSWVGFSGGQH 304
Query: 138 HVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD-RESRLRPKIIETFNQDSPWAVYEVT 196
H V + S G+ YS G G+LGLG+ E + P +I V V
Sbjct: 305 HTVCMDSEGK--------AYSLGRAEYGRLGLGEGAEEKSIPTLISRLP-----VVSSVA 351
Query: 197 CGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQV--KELPQYVYLV 254
CG+ ++ R + +G+G N QLG G + A P ++ K+L V L
Sbjct: 352 CGASVGYAVSKDGR--------VFAWGMGTNYQLGTGQDEDAWSPVEMTGKQLENRVVL- 402
Query: 255 SVDCGLFHT 263
+V G HT
Sbjct: 403 TVSSGGQHT 411
>sp|Q9P258|RCC2_HUMAN Protein RCC2 OS=Homo sapiens GN=RCC2 PE=1 SV=2
Length = 522
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/255 (27%), Positives = 106/255 (41%), Gaps = 49/255 (19%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TVV +C + H + + + G+ +SWG N GQLG GD + P++IE +
Sbjct: 151 RTVVSGSCAA-HSLLITTEGK--------LWSWGRNEKGQLGHGDTKRVEAPRLIEGLSH 201
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ + CG HT LT + FG + GQLG G Q+ VP +
Sbjct: 202 E---VIVSAACGRNHTLALTE--------TGSVFAFGENKMGQLGLGN-QTDAVPSPAQI 249
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN-ASLTRNEAGDAISP----- 300
+ + + CG + ++ G+++S+G CP L N G I+
Sbjct: 250 MYNGQPITKMACGAEFSMIMDCKGNLYSFG-------CPEYGQLGHNSDGKFIARAQRIE 302
Query: 301 -------------ILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGV 346
I + +G P V+ VACGA HT LV D +++SWG G G
Sbjct: 303 YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGR 361
Query: 347 LGTGKTIDFFAPAIV 361
LG + D P +V
Sbjct: 362 LGHAEQKDEMVPRLV 376
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 91/233 (39%), Gaps = 47/233 (20%)
Query: 70 APIKICSVKAG--GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH 127
A +++ +V +G SL I G LW WG + G P +
Sbjct: 146 AGVRVRTVVSGSCAAHSLLITTEGKLWSWGRN---EKGQLGHGDTKRVEAPRLIEGLSHE 202
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V ACG H +AL G + ++G N GQLGLG++ + P +
Sbjct: 203 VIVSAACGRNHTLALTETGSVF--------AFGENKMGQLGLGNQTDAV-PSPAQIMYNG 253
Query: 188 SPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT------------ 235
P + ++ CG+ + ++ + ++FG E GQLGH +
Sbjct: 254 QP--ITKMACGAEFSMIMD--------CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEY 303
Query: 236 QSALVPEQV----------KELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGM 277
LVP +V + LP V + V CG HT V+ S V+SWG
Sbjct: 304 DCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF 356
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/227 (24%), Positives = 92/227 (40%), Gaps = 45/227 (19%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKV 132
I S G +LA+ G+++ +G + + G + PSP ++G + K+
Sbjct: 204 IVSAACGRNHTLALTETGSVFAFGE----NKMGQLGLGNQTDAVPSPAQIMYNGQPITKM 259
Query: 133 ACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGD------RESRLR------PKI 180
ACG+E + + G YS+G GQLG R R+ P+
Sbjct: 260 ACGAEFSMIMDCKGN--------LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRR 311
Query: 181 IETFNQDSP---------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
+ F + + V +V CG+ HT +L +KR +++G G G+LG
Sbjct: 312 VAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKR--------VFSWGFGGYGRLG 363
Query: 232 HGTTQSALVPEQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
H + +VP VK + P + G + VS G ++ WG
Sbjct: 364 HAEQKDEMVPRLVKLFDFPGR-GASQIYAGYTCSFAVSEVGGLFFWG 409
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 307 GPH------GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
GPH G + + V +C AAH++L+T +G KLWSWGR G LG G T AP +
Sbjct: 138 GPHRYGCLAGVRVRTVVSGSC-AAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRL 195
Query: 361 V 361
+
Sbjct: 196 I 196
>sp|Q8BK67|RCC2_MOUSE Protein RCC2 OS=Mus musculus GN=Rcc2 PE=2 SV=1
Length = 520
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 49/255 (19%)
Query: 127 HTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQ 186
TVV +C + H + + + G+ +SWG N GQLG GD + P++IE +
Sbjct: 149 RTVVSGSCAA-HSLLITTEGK--------LWSWGRNEKGQLGHGDTKRVEAPRLIEALSH 199
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
+ A+ CG HT LT + FG + GQLG G Q+ VP +
Sbjct: 200 E---AIVLAACGRNHTLALTD--------TGSVFAFGENKMGQLGLGN-QTDAVPSPAQI 247
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN-ASLTRNEAGDAISP----- 300
+ + + CG + ++ G+++S+G CP L N G I+
Sbjct: 248 MYNGQPITKMACGAEFSMLMDCKGNLYSFG-------CPEYGQLGHNSDGKFIARAQRIE 300
Query: 301 -------------ILISGNGPHGPKFQDPVQ-VACGAAHTVLVTDDGYKLWSWGRGRSGV 346
I + +G P V+ VACGA HT LV D +++SWG G G
Sbjct: 301 YDCELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHT-LVLDSQKRVFSWGFGGYGR 359
Query: 347 LGTGKTIDFFAPAIV 361
LG + D P +V
Sbjct: 360 LGHAEQKDEMVPRLV 374
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 99/257 (38%), Gaps = 53/257 (20%)
Query: 72 IKICSVKAG--GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+++ +V +G SL I G LW WG + G P + +
Sbjct: 146 VRVRTVVSGSCAAHSLLITTEGKLWSWGRN---EKGQLGHGDTKRVEAPRLIEALSHEAI 202
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V ACG H +AL G + ++G N GQLGLG++ + P + P
Sbjct: 203 VLAACGRNHTLALTDTGSVF--------AFGENKMGQLGLGNQTDAV-PSPAQIMYNGQP 253
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT------------QS 237
+ ++ CG+ + L+ + ++FG E GQLGH +
Sbjct: 254 --ITKMACGAEFSMLMD--------CKGNLYSFGCPEYGQLGHNSDGKFIARAQRIEYDC 303
Query: 238 ALVPEQV----------KELP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
LVP +V + LP V + V CG HT V+ S V+SWG G G
Sbjct: 304 ELVPRRVAIFIEKTKDGQILPVPNVVVRDVACGANHTLVLDSQKRVFSWGF-GGYG---- 358
Query: 287 ASLTRNEAGDAISPILI 303
L E D + P L+
Sbjct: 359 -RLGHAEQKDEMVPRLV 374
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 90/217 (41%), Gaps = 45/217 (20%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVVAL 142
+LA+ + G+++ +G + + G + PSP ++G + K+ACG+E + +
Sbjct: 212 TLALTDTGSVFAFGE----NKMGQLGLGNQTDAVPSPAQIMYNGQPITKMACGAEFSMLM 267
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGD------RESRLR------PKIIETFNQDSP- 189
G YS+G GQLG R R+ P+ + F + +
Sbjct: 268 DCKGN--------LYSFGCPEYGQLGHNSDGKFIARAQRIEYDCELVPRRVAIFIEKTKD 319
Query: 190 --------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
V +V CG+ HT +L +KR +++G G G+LGH + +VP
Sbjct: 320 GQILPVPNVVVRDVACGANHTLVLDSQKR--------VFSWGFGGYGRLGHAEQKDEMVP 371
Query: 242 EQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
VK + P + G + VS G ++ WG
Sbjct: 372 RLVKLFDFPGR-GATQIYAGYTCSFAVSEVGGLFFWG 407
Score = 43.5 bits (101), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 8/61 (13%)
Query: 307 GPH------GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
GPH G + + V +C AAH++L+T +G KLWSWGR G LG G T AP +
Sbjct: 136 GPHRYGCLSGVRVRTVVSGSC-AAHSLLITTEG-KLWSWGRNEKGQLGHGDTKRVEAPRL 193
Query: 361 V 361
+
Sbjct: 194 I 194
Score = 39.7 bits (91), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 18/120 (15%)
Query: 253 LVSVDCGLFHTSVVSSAGDVWSWGM-EKGLGLCPNASLTRNEAGDAISPILISGNGPHGP 311
+VS C H+ ++++ G +WSWG EKG L + +P LI
Sbjct: 151 VVSGSCAA-HSLLITTEGKLWSWGRNEKG-------QLGHGDTKRVEAPRLI-----EAL 197
Query: 312 KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF-APAIVLW--PPLTE 368
+ V ACG HT+ +TD G ++++G + G LG G D +PA +++ P+T+
Sbjct: 198 SHEAIVLAACGRNHTLALTDTG-SVFAFGENKMGQLGLGNQTDAVPSPAQIMYNGQPITK 256
>sp|Q8SSY6|SPKUL_DICDI Bifunctional serine/threonine-protein kinase/NEDD4-like E3
ubiquitin-protein ligase OS=Dictyostelium discoideum
GN=DDB_G0276527 PE=3 SV=2
Length = 1887
Score = 65.5 bits (158), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/331 (24%), Positives = 139/331 (41%), Gaps = 84/331 (25%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGH---TV 129
KI + G + S I + G L+ +G+ L G +L S +P V F V
Sbjct: 189 KIVLISTGAIHSSFITDQGNLYTFGDGLL---GKLGHGNLESYSSPKLVEFFQTKPSLRV 245
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V +A G +H +AL G+ YSWG N++ QLGLG+ S + + N +
Sbjct: 246 VSIANGGKHSLALTICGK--------VYSWGGNDSCQLGLGNGSSSSYYSLPQLINFNIS 297
Query: 190 W----------------------------------------AVYEVTCGSFHTALLTHRK 209
+ + +++CG+ +A++T +
Sbjct: 298 YNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTNRSAVITDK- 356
Query: 210 RPNDMLESMCWTFGLGENGQLGHGTTQSALV---PEQVKELPQYVYLVSVDCGLFHTSVV 266
+ +TFG G++G+LG G QS L+ P+ V+ L Q +++ + G H+ V+
Sbjct: 357 -------GLLFTFGRGDHGRLGLGE-QSLLMQSTPKLVQSL-QGHFIIDMSSGGGHSLVL 407
Query: 267 SSAGDVWSWGM----EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPV---QV 319
++ G V+S+G + G+G N P I + Q P+ +V
Sbjct: 408 TNKGLVFSFGRNDQGQLGIGCFSNQQTI---------PKQIQWFQTSQQQQQQPINIIKV 458
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ G H++ ++D+ ++WGR GVLGT
Sbjct: 459 SAGGYHSIAISDNN-DTYAWGRSDYGVLGTS 488
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 89/223 (39%), Gaps = 28/223 (12%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
IKI + G S I + G L+ +G G SL+ TP V GH ++
Sbjct: 338 IKIVKLSCGTNRSAVITDKGLLFTFGRGDHGRLGL-GEQSLLMQSTPKLVQSLQGHFIID 396
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLG-DRESRLRPKII-----ETFN 185
++ G H + L + G + +S+G N+ GQLG+G + PK I
Sbjct: 397 MSSGGGHSLVLTNKG--------LVFSFGRNDQGQLGIGCFSNQQTIPKQIQWFQTSQQQ 448
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG-----HGTTQSALV 240
Q P + +V+ G +H+ ++ D ++ W G + G LG G ++
Sbjct: 449 QQQPINIIKVSAGGYHSIAIS------DNNDTYAW--GRSDYGVLGTSIDVQGDRNLPVL 500
Query: 241 PEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGL 283
+ V + V G H +S G ++SWG G L
Sbjct: 501 INSNSVVVDNVKFIDVSSGFQHNVAMSIDGSLYSWGCNAGQRL 543
Score = 48.1 bits (113), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 60/148 (40%), Gaps = 20/148 (13%)
Query: 71 PIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVV 130
PI I V AGG S+AI + + WG D G V PV VV
Sbjct: 452 PINIIKVSAGGYHSIAISDNNDTYAWGRS---DYGVLGTSIDVQGDRNLPVLINSNSVVV 508
Query: 131 ------KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETF 184
V+ G +H VA+ G YSWG N +LG E++L PK
Sbjct: 509 DNVKFIDVSSGFQHNVAMSIDGS--------LYSWGCNAGQRLGFKSDENQLTPKKCFIN 560
Query: 185 NQDSPWAVYEVTCGSFHTALLTHR-KRP 211
++DS ++ TCG T ++ R K P
Sbjct: 561 SKDSKPLLF--TCGEIITIIVEKRFKEP 586
Score = 40.4 bits (93), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 49/97 (50%), Gaps = 13/97 (13%)
Query: 182 ETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
E +NQ + ++ G+ H++ +T + +TFG G G+LGHG +S P
Sbjct: 183 EMYNQQ---KIVLISTGAIHSSFITD--------QGNLYTFGDGLLGKLGHGNLESYSSP 231
Query: 242 EQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+ V+ + + +VS+ G H+ ++ G V+SWG
Sbjct: 232 KLVEFFQTKPSLRVVSIANGGKHSLALTICGKVYSWG 268
Score = 38.9 bits (89), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 52/271 (19%), Positives = 104/271 (38%), Gaps = 72/271 (26%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
++ +V ++ G+ H + G Y++G G+LG G+ ES PK++E
Sbjct: 185 YNQQKIVLISTGAIHSSFITDQGN--------LYTFGDGLLGKLGHGNLESYSSPKLVEF 236
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT---TQSALV 240
F V + G H+ LT + +++G ++ QLG G + +
Sbjct: 237 FQTKPSLRVVSIANGGKHSLALT--------ICGKVYSWGGNDSCQLGLGNGSSSSYYSL 288
Query: 241 PEQVKELPQY---------------------------------------VYLVSVDCGLF 261
P+ + Y + +V + CG
Sbjct: 289 PQLINFNISYNNNNNNNNNNSTNNNNNNNNDGAQQQFSLSQNSSSNNNKIKIVKLSCGTN 348
Query: 262 HTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQV 319
++V++ G ++++G LGL + L ++ +P L+ H + +
Sbjct: 349 RSAVITDKGLLFTFGRGDHGRLGLGEQSLLMQS------TPKLVQSLQGHF-----IIDM 397
Query: 320 ACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ G H++++T+ G ++S+GR G LG G
Sbjct: 398 SSGGGHSLVLTNKGL-VFSFGRNDQGQLGIG 427
Score = 34.7 bits (78), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
Q V ++ GA H+ +TD G L+++G G G LG G + +P +V
Sbjct: 188 QKIVLISTGAIHSSFITDQG-NLYTFGDGLLGKLGHGNLESYSSPKLV 234
>sp|Q6NRS1|IBTK_XENLA Inhibitor of Bruton tyrosine kinase OS=Xenopus laevis GN=ibtk PE=2
SV=1
Length = 1339
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 87/196 (44%), Gaps = 28/196 (14%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G ++S+ P+++E F + + V C FH+ L+ + +
Sbjct: 146 YTWGDNVNFTLGHGTQQSKHHPELVEMFPRSGVYIKQMVLC-KFHSVFLSQKGQ------ 198
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G+ G+LGHG + LVP V+ L + V HT V++ G V+++G
Sbjct: 199 --VYTCGHGQGGRLGHGDELTCLVPRLVEGLRGHP-CTQVAGAKDHTVVLTEDGYVYTFG 255
Query: 277 ME--KGLGLC---PNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
+ LG+ PN+++ R + + G VA G HTVL T
Sbjct: 256 LNTFHQLGIQPPPPNSNVPRQIQAKTMKGKTVLG-------------VAAGRFHTVLWTK 302
Query: 332 DGYKLWSWGRGRSGVL 347
D G+ G L
Sbjct: 303 DAVYTVGLNGGQLGYL 318
Score = 36.2 bits (82), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 63/169 (37%), Gaps = 29/169 (17%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
++ P V GH +VA +H V L ED Y++G N QLG+
Sbjct: 216 LTCLVPRLVEGLRGHPCTQVAGAKDHTVVLT--------EDGYVYTFGLNTFHQLGIQPP 267
Query: 173 ESRLR-PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
P+ I+ V V G FHT L T + +T GL GQLG
Sbjct: 268 PPNSNVPRQIQAKTMKGK-TVLGVAAGRFHTVLWT---------KDAVYTVGLN-GGQLG 316
Query: 232 H----GTTQSALVPEQVKELPQY---VYLVSVDCGLFHTSVVSSAGDVW 273
+ + P QV L + LVS G T VS GD++
Sbjct: 317 YLQDPNGEKFVSCPRQVSALHHKDINITLVSASDGA--TVCVSERGDIY 363
>sp|Q8BTU7|RCCD1_MOUSE RCC1 domain-containing protein 1 OS=Mus musculus GN=Rccd1 PE=2 SV=2
Length = 377
Score = 63.5 bits (153), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EK 279
++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ +S GD++ WG E
Sbjct: 184 SWGAGRHGQLGHGTLEAELEPRLLEAL-QGLRMAKVAAGGWHSVCLSETGDIYIWGWNES 242
Query: 280 GLGLCPNASLTRNEA-------------------GDAISPILISGNGPHG-----PKFQD 315
G P S T N+A DA +P P P D
Sbjct: 243 GQLALPTRSGTENKAEREEATELNEDGLKEELAVADAGAPAHFIAIQPFPALLDLPLGSD 302
Query: 316 PVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
V +CG+ HT +VT G +L++WG G+ G LG + P V
Sbjct: 303 AVMASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHKDSTSLDRPCCV 347
Score = 40.8 bits (94), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 34/77 (44%), Gaps = 9/77 (11%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G V +CGS H + GE Y +WG GQLG D S RP +E F
Sbjct: 300 GSDAVMASCGSRHTAVVTRTGELY--------TWGWGKYGQLGHKDSTSLDRPCCVEYFV 351
Query: 186 QDSPWAVYEVTCGSFHT 202
+ V VTCG ++T
Sbjct: 352 ERQ-LEVRAVTCGPWNT 367
Score = 40.8 bits (94), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 94/234 (40%), Gaps = 53/234 (22%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+++ ++ G L + AG ++ WG G +L + P + G + K
Sbjct: 161 LRVRQLELGAEHVLLLCAAGQVFSWGAG---RHGQLGHGTLEAELEPRLLEALQGLRMAK 217
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR---ESRLRPKIIETFNQD- 187
VA G H V L G+ Y WG N +GQL L R E++ + N+D
Sbjct: 218 VAAGGWHSVCLSETGDIYI--------WGWNESGQLALPTRSGTENKAEREEATELNEDG 269
Query: 188 --SPWAVYEV---------------------------TCGSFHTALLTHRKRPNDMLESM 218
AV + +CGS HTA++T R ++
Sbjct: 270 LKEELAVADAGAPAHFIAIQPFPALLDLPLGSDAVMASCGSRHTAVVT---RTGEL---- 322
Query: 219 CWTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVYLVSVDCGLFHTSVVSSAGD 271
+T+G G+ GQLGH + S P V+ + + + + +V CG ++T V + D
Sbjct: 323 -YTWGWGKYGQLGHKDSTSLDRPCCVEYFVERQLEVRAVTCGPWNTYVYAMERD 375
>sp|Q9P2D0|IBTK_HUMAN Inhibitor of Bruton tyrosine kinase OS=Homo sapiens GN=IBTK PE=1
SV=3
Length = 1353
Score = 62.8 bits (151), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
Y+WG N N LG G + S+ P++++ F++ + V C FH+ L+ + +
Sbjct: 145 YTWGDNTNFTLGHGSQNSKHHPELVDLFSRSGIYIKQVVLC-KFHSVFLSQKGQ------ 197
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
+T G G G+LGHG Q+ LVP V+ L + V HT V++ G V+++G
Sbjct: 198 --VYTCGHGPGGRLGHGDEQTCLVPRLVEGLNGH-NCSQVAAAKDHTVVLTEDGCVYTFG 254
Query: 277 ME--KGLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
+ LG+ P S P I G + VA G HTVL T +
Sbjct: 255 LNIFHQLGIIPPPSSCN-------VPRQIQAKYLKGRTI---IGVAAGRFHTVLWTREAV 304
Query: 335 KLWSWGRGRSGVL 347
G+ G L
Sbjct: 305 YTMGLNGGQLGCL 317
>sp|Q52KW8|RCC2_XENLA Protein RCC2 homolog OS=Xenopus laevis GN=rcc2 PE=2 SV=1
Length = 513
Score = 62.4 bits (150), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 103/257 (40%), Gaps = 53/257 (20%)
Query: 72 IKICSVKAG--GMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTV 129
+++ SV +G SL I G LW WG D G + P + G
Sbjct: 139 VQVRSVASGSCAAHSLLITVEGKLWSWGRN---DKGQLGHGDIKRIDVPKLIESLKGEVF 195
Query: 130 VKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSP 189
V ACG H +AL G Y ++G N GQLGLG++ + P + P
Sbjct: 196 VHAACGRNHTLALTENGSVY--------AFGENKMGQLGLGNKTDAV-PSPAQILYNGQP 246
Query: 190 WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGT--------------- 234
+ +V CG+ + ++ + ++FG E GQLGH +
Sbjct: 247 --ITKVACGAEFSMIMD--------CKGNLYSFGCPEYGQLGHNSDGKYIARAQRIEYDC 296
Query: 235 ----TQSALVPEQVKE---LP-QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN 286
+ A+ E+ K+ LP V + + CG+ H+ ++ S V+SWG G G
Sbjct: 297 ELIARRIAIFIEKTKDGQILPVPNVVVRDIACGINHSLILDSQKRVFSWGF-GGYG---- 351
Query: 287 ASLTRNEAGDAISPILI 303
L +E D + P L+
Sbjct: 352 -RLGHSEQRDEMVPRLV 367
Score = 53.1 bits (126), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 78/174 (44%), Gaps = 31/174 (17%)
Query: 192 VYEVTCGS--FHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQ 249
V V GS H+ L+T +E W++G + GQLGHG + VP+ ++ L
Sbjct: 141 VRSVASGSCAAHSLLIT--------VEGKLWSWGRNDKGQLGHGDIKRIDVPKLIESLKG 192
Query: 250 YVYLVSVDCGLFHTSVVSSAGDVWSWGMEK----GLGLCPNASLTRNEAGDAISPILISG 305
V+ V CG HT ++ G V+++G K GLG N+ SP I
Sbjct: 193 EVF-VHAACGRNHTLALTENGSVYAFGENKMGQLGLG---------NKTDAVPSPAQILY 242
Query: 306 NGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
NG Q +VACGA ++++ G L+S+G G LG + A A
Sbjct: 243 NG------QPITKVACGAEFSMIMDCKG-NLYSFGCPEYGQLGHNSDGKYIARA 289
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/217 (23%), Positives = 87/217 (40%), Gaps = 45/217 (20%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWD-FHGHTVVKVACGSEHVVAL 142
+LA+ G+++ +G + + G + PSP ++G + KVACG+E + +
Sbjct: 205 TLALTENGSVYAFGENKM----GQLGLGNKTDAVPSPAQILYNGQPITKVACGAEFSMIM 260
Query: 143 VSAGETYKGEDLVCYSWGANNNGQLGLGD------RESRLR------PKIIETFNQDSP- 189
G YS+G GQLG R R+ + I F + +
Sbjct: 261 DCKGN--------LYSFGCPEYGQLGHNSDGKYIARAQRIEYDCELIARRIAIFIEKTKD 312
Query: 190 --------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
V ++ CG H+ +L +KR +++G G G+LGH + +VP
Sbjct: 313 GQILPVPNVVVRDIACGINHSLILDSQKR--------VFSWGFGGYGRLGHSEQRDEMVP 364
Query: 242 EQVK--ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
VK + P + G + VS G ++ WG
Sbjct: 365 RLVKLFDFPGR-GAAQIYAGATCSFAVSEMGGLFFWG 400
Score = 37.0 bits (84), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 8/61 (13%)
Query: 307 GPH------GPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAI 360
GPH G + + +C AAH++L+T +G KLWSWGR G LG G P +
Sbjct: 129 GPHRYGCLTGVQVRSVASGSC-AAHSLLITVEG-KLWSWGRNDKGQLGHGDIKRIDVPKL 186
Query: 361 V 361
+
Sbjct: 187 I 187
>sp|Q7ZZC8|NEK9_XENLA Serine/threonine-protein kinase Nek9 OS=Xenopus laevis GN=nek9 PE=2
SV=1
Length = 944
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 107/238 (44%), Gaps = 27/238 (11%)
Query: 118 PSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESR-- 175
P V G +V KV+CGS+ V + G+ YS+G++ G LG+
Sbjct: 399 PKHVEKLQGKSVQKVSCGSDFTVCITDEGQ--------LYSFGSDYYGCLGVNQSAGSEV 450
Query: 176 LRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTT 235
L P +++ F + V +V+CG H LT K +++G GE G+LG +
Sbjct: 451 LEPLLVDFFLNE---PVDQVSCGDSHIMALTRSKS--------VYSWGCGEYGRLGLDSE 499
Query: 236 QSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN---ASLTRN 292
P++V E+ + + +V+V CG + +++ G V + G+ + L N A + +
Sbjct: 500 DDVYSPQKV-EVQRGLCIVNVCCGSDGSFLLTLTGKVLACGLNEHNKLGLNQYTAGIINH 558
Query: 293 EAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
EA + P S F ++ G HT + + G +L ++G + G LG G
Sbjct: 559 EAFQEV-PYTTSLTLAKQLSFYKIRSISPGRTHTAAIDERG-RLLTFGSNKCGQLGVG 614
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 84/185 (45%), Gaps = 18/185 (9%)
Query: 178 PKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQS 237
P+ ++ F W +V G H A++T K ++ + G +GQLGHG S
Sbjct: 341 PQKLDVFK--GGWRARQVCAGDAHFAVVTVEK---ELYTWVNMQGGSKLHGQLGHGDRAS 395
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
P+ V++L Q + V CG T ++ G ++S+G + L N S +
Sbjct: 396 YRQPKHVEKL-QGKSVQKVSCGSDFTVCITDEGQLYSFGSDYYGCLGVNQS----AGSEV 450
Query: 298 ISPILISGNGPHGPKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFF 356
+ P+L+ +PV QV+CG +H + +T ++SWG G G LG D +
Sbjct: 451 LEPLLVDFF------LNEPVDQVSCGDSHIMALTRSK-SVYSWGCGEYGRLGLDSEDDVY 503
Query: 357 APAIV 361
+P V
Sbjct: 504 SPQKV 508
Score = 38.9 bits (89), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 100/270 (37%), Gaps = 44/270 (16%)
Query: 77 VKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVVKVA 133
V G +A+ + +++ WG G L S ++P V G +V V
Sbjct: 467 VSCGDSHIMALTRSKSVYSWG------CGEYGRLGLDSEDDVYSPQKVEVQRGLCIVNVC 520
Query: 134 CGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRL----------RPKIIET 183
CGS+ L T G+ L C G N + +LGL + + +
Sbjct: 521 CGSDGSFLL-----TLTGKVLAC---GLNEHNKLGLNQYTAGIINHEAFQEVPYTTSLTL 572
Query: 184 FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQ 243
Q S + + ++ G HTA + R R TFG + GQLG G + L
Sbjct: 573 AKQLSFYKIRSISPGRTHTAAIDERGR--------LLTFGSNKCGQLGVGDYRKHLGINL 624
Query: 244 VKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM--EKGLGLCPNASLTRNEAGDAISPI 301
+ ++ V CG T+ ++ +++WG L + PN R + D I
Sbjct: 625 LGGPLGGKQVIRVSCGDEFTTAATADNHIFAWGNGGNGRLAMTPNE---RPQGSD----I 677
Query: 302 LISGNGPHGPKFQDPVQVACGAAHTVLVTD 331
S P ++C HT+L+ +
Sbjct: 678 CTSWPRPIFGSLHHVTDLSCRGWHTILIVE 707
>sp|Q4R828|RCCD1_MACFA RCC1 domain-containing protein 1 OS=Macaca fascicularis GN=RCCD1
PE=2 SV=1
Length = 376
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 35/184 (19%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EK 279
++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 181 SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLTMAEVAAGGWHSVCVSETGDIYIWGWNES 239
Query: 280 GLGLCPNASLTR------------NEAGDAISPILISGNGPHGPKF-------------- 313
G P +L NE G + +G P
Sbjct: 240 GQLALPTRNLAEDGETVAREATGLNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLG 299
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWPPLTEEFKQD 373
D V+V+CG+ HT +VT G +L++WG G+ G LG T WP E F
Sbjct: 300 SDAVKVSCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLD------WPRRVEYFVDK 352
Query: 374 ELNT 377
+L
Sbjct: 353 QLQV 356
Score = 48.9 bits (115), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 77/186 (41%), Gaps = 56/186 (30%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ G+EH + L +AG+ + SWG +GQLG G E+ L P+++E +
Sbjct: 162 QLELGAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEALQGLT-- 211
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE-------- 242
+ EV G +H+ ++ D+ + +G E+GQL T A E
Sbjct: 212 -MAEVAAGGWHSVCVSET---GDI-----YIWGWNESGQLALPTRNLAEDGETVAREATG 262
Query: 243 ------QVK-----------------------ELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
QVK +LP V V CG HT+VV+ G+++
Sbjct: 263 LNEDGSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVTRTGELY 322
Query: 274 SWGMEK 279
+WG K
Sbjct: 323 TWGWGK 328
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 93/232 (40%), Gaps = 55/232 (23%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ ++ G +L +D AG ++ WG G +L + P + G T+ +
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGG---RHGQLGHGTLEAELEPRLLEALQGLTMAE 214
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRE------------------ 173
VA G H V + G+ Y WG N +GQL L R
Sbjct: 215 VAAGGWHSVCVSETGD--------IYIWGWNESGQLALPTRNLAEDGETVAREATGLNED 266
Query: 174 -------SRLRPKIIETFNQDSPWAVY----------EVTCGSFHTALLTHRKRPNDMLE 216
R+ F P+ +V+CGS HTA++T R ++
Sbjct: 267 GSQVKRTGRVEDGAPAPFIAVQPFPALLDLPLGSDAVKVSCGSRHTAVVT---RTGEL-- 321
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVYLVSVDCGLFHTSVVS 267
+T+G G+ GQLGH T S P +V+ + + + + +V CG ++T V +
Sbjct: 322 ---YTWGWGKYGQLGHEDTTSLDWPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
>sp|Q9NB71|HIW_DROME E3 ubiquitin-protein ligase highwire OS=Drosophila melanogaster
GN=hiw PE=1 SV=2
Length = 5233
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 59/129 (45%), Gaps = 21/129 (16%)
Query: 113 VSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDR 172
V+ P + VV+VACG H V L AGE Y++G+N GQLG GD
Sbjct: 952 VAPLAPQLLQLTSSSPVVQVACGLHHTVVLTLAGEV--------YTFGSNQYGQLGSGDL 1003
Query: 173 ESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ P ++ P A+ +V GS HT LLT + M +TFG + GQLG
Sbjct: 1004 QPVSGPVRVQV-----PGAISQVAAGSNHTVLLTSK--------GMVYTFGNYQKGQLGR 1050
Query: 233 GTTQSALVP 241
+ L P
Sbjct: 1051 LPSDYGLKP 1059
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 66/132 (50%), Gaps = 16/132 (12%)
Query: 172 RESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG 231
R + L P++++ SP V +V CG HT +LT L +TFG + GQLG
Sbjct: 951 RVAPLAPQLLQ-LTSSSP--VVQVACGLHHTVVLT--------LAGEVYTFGSNQYGQLG 999
Query: 232 HGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASL 289
G Q P +V ++P + V+ G HT +++S G V+++G +KG LG P+
Sbjct: 1000 SGDLQPVSGPVRV-QVPGAISQVAA--GSNHTVLLTSKGMVYTFGNYQKGQLGRLPSDYG 1056
Query: 290 TRNEAGDAISPI 301
+ D SP+
Sbjct: 1057 LKPPPQDDDSPV 1068
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 67/150 (44%), Gaps = 24/150 (16%)
Query: 204 LLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHT 263
L+ RK LE+ G L + A + Q+ +L +V V CGL HT
Sbjct: 919 LIMRRKERKGELETGAAGGGAATPTDLDKDPPRVAPLAPQLLQLTSSSPVVQVACGLHHT 978
Query: 264 SVVSSAGDVWSWGMEK----GLG-LCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQ 318
V++ AG+V+++G + G G L P + R + AIS Q
Sbjct: 979 VVLTLAGEVYTFGSNQYGQLGSGDLQPVSGPVRVQVPGAIS------------------Q 1020
Query: 319 VACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
VA G+ HTVL+T G ++++G + G LG
Sbjct: 1021 VAAGSNHTVLLTSKGM-VYTFGNYQKGQLG 1049
>sp|P25183|RCC1_XENLA Regulator of chromosome condensation OS=Xenopus laevis GN=rcc1 PE=2
SV=1
Length = 424
Score = 61.6 bits (148), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/303 (27%), Positives = 125/303 (41%), Gaps = 52/303 (17%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPS--PVWDFHGHTVV 130
K+ V AG + A+ G ++++G+ G L+ S PV V+
Sbjct: 126 KVVQVSAGDSHTAALTEDGRVFVFGSF----RDNNGVIGLLEPMKKSMVPVQVQINTPVI 181
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLG--------LGDR---ESRLRPK 179
K+A G++H+V L G+ Y+ G GQLG G R E L P+
Sbjct: 182 KIASGNDHLVLLTVDGD--------LYTSGCGEQGQLGRVPERFTNRGGRKGLERLLVPQ 233
Query: 180 IIETFNQDSPWAVYE-VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
I + S ++ V CG++ T ++ E + FGL QLG TQ+
Sbjct: 234 CIHLKAKGSGRVHFQDVFCGAYFTFAVSQ--------EGHVYGFGLSNYHQLGTKNTQAC 285
Query: 239 LVPEQVKELPQYVYL-VSVDCGLFHTSVVSSAGDVWSWG-MEKG-LGLCPNASLTRNEAG 295
P+ + + G HT V S G +S G E G LGL NA E
Sbjct: 286 YAPQNLTSFKNSTKSWIGFSGGQHHTVCVDSEGKAYSLGRAEYGRLGLGENA-----EEQ 340
Query: 296 DAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDF 355
+PI P PK VA GA+ + V+ DG +++WG G + LGTG+ D
Sbjct: 341 SEPTPI------PDLPKINS---VASGASVSYAVSTDGC-VFAWGMGTNLQLGTGEEEDV 390
Query: 356 FAP 358
++P
Sbjct: 391 WSP 393
>sp|Q90XC2|NEK8_DANRE Serine/threonine-protein kinase Nek8 OS=Danio rerio GN=nek8 PE=2
SV=1
Length = 697
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/286 (23%), Positives = 120/286 (41%), Gaps = 35/286 (12%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMW-------GNCPLPDSSTEGGFSLVSSFTPSPVWDFH 125
++ V G + + +G L W G LP + + +S F
Sbjct: 341 EVIQVSLGRTQKMGVTKSGRLITWEAPSVGSGEPTLPGAVEQMQPQFISRFLEGQ----S 396
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G T+ V+CG L G + ++G+ +NG LG G+ +PKI+E
Sbjct: 397 GVTIKSVSCGDLFTTCLTDRG--------IIMTFGSGSNGCLGHGNFNDVTQPKIVEAL- 447
Query: 186 QDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVK 245
+ + +V+CG+ H +T+ E +++G G+NG+LG T S P+QV
Sbjct: 448 --LGYELVQVSCGASHVLAVTN--------EREVFSWGRGDNGRLGLATQDSHNCPQQV- 496
Query: 246 ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK--GLGLCPNASLTRNEAGDAISPILI 303
LP V CG+ + ++S+ + + G + LGL + + + + +
Sbjct: 497 SLPADFEAQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHL 556
Query: 304 SGNGPHGP-KFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
P + V + G AH+V VT+ G + +++G + G LG
Sbjct: 557 FQLVQSAPLNTEKIVYIDIGTAHSVAVTEKG-QCFTFGSNQHGQLG 601
Score = 59.3 bits (142), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 73/304 (24%), Positives = 126/304 (41%), Gaps = 52/304 (17%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I SV G + + + + G + +G+ G F+ V+ P V G+ +V+
Sbjct: 398 VTIKSVSCGDLFTTCLTDRGIIMTFGSGS-NGCLGHGNFNDVTQ--PKIVEALLGYELVQ 454
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
V+CG+ HV+A+ + E +SWG +NG+LGL ++S P+ + + +
Sbjct: 455 VSCGASHVLAVTNEREV--------FSWGRGDNGRLGLATQDSHNCPQQVSL---PADFE 503
Query: 192 VYEVTCG--------SFHTALLTHRKRPNDM-LESMCWT-----FGLGENGQLGHGTTQS 237
V CG + H L R N + L+ + T F E L +
Sbjct: 504 AQRVLCGVDCSMIMSTQHQILACGNNRFNKLGLDKVSGTEEPSSFCQVEEVHLFQLVQSA 563
Query: 238 ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDA 297
L E++ V +D G H+ V+ G +++G + + L + +
Sbjct: 564 PLNTEKI---------VYIDIGTAHSVAVTEKGQCFTFGSNQ------HGQLGCSHRRSS 608
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFA 357
P +SG Q ACG A T+ + +G ++++WG+G G LG K DF
Sbjct: 609 RVPYQVSG-------LQGITMAACGDAFTLAIGAEG-EVYTWGKGARGRLGR-KEEDFGI 659
Query: 358 PAIV 361
P V
Sbjct: 660 PKPV 663
>sp|A6NED2|RCCD1_HUMAN RCC1 domain-containing protein 1 OS=Homo sapiens GN=RCCD1 PE=1 SV=1
Length = 376
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 75/168 (44%), Gaps = 29/168 (17%)
Query: 221 TFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGM-EK 279
++G G +GQLGHGT ++ L P ++ L Q + + V G +H+ VS GD++ WG E
Sbjct: 181 SWGGGRHGQLGHGTLEAELEPRLLEAL-QGLVMAEVAAGGWHSVCVSETGDIYIWGWNES 239
Query: 280 GLGLCPNASLTR------------NEAGDAISPILISGNGPHGPKF-------------- 313
G P +L NE G + + +G P
Sbjct: 240 GQLALPTRNLAEDGETVAREATELNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMG 299
Query: 314 QDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
D V+ +CG+ HT +VT G +L++WG G+ G LG T P V
Sbjct: 300 SDAVKASCGSRHTAVVTRTG-ELYTWGWGKYGQLGHEDTTSLDRPRRV 346
Score = 47.8 bits (112), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 75/186 (40%), Gaps = 56/186 (30%)
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
++ G+EH + L +AG+ + SWG +GQLG G E+ L P+++E
Sbjct: 162 QLELGAEHALLLDAAGQVF--------SWGGGRHGQLGHGTLEAELEPRLLEALQG---L 210
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPE-------- 242
+ EV G +H+ ++ D+ + +G E+GQL T A E
Sbjct: 211 VMAEVAAGGWHSVCVSET---GDI-----YIWGWNESGQLALPTRNLAEDGETVAREATE 262
Query: 243 ------QVK-----------------------ELPQYVYLVSVDCGLFHTSVVSSAGDVW 273
QVK +LP V CG HT+VV+ G+++
Sbjct: 263 LNEDGSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVTRTGELY 322
Query: 274 SWGMEK 279
+WG K
Sbjct: 323 TWGWGK 328
Score = 46.6 bits (109), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 36/77 (46%), Gaps = 9/77 (11%)
Query: 126 GHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFN 185
G VK +CGS H + GE Y+WG GQLG D S RP+ +E F
Sbjct: 299 GSDAVKASCGSRHTAVVTRTGE--------LYTWGWGKYGQLGHEDTTSLDRPRRVEYFV 350
Query: 186 QDSPWAVYEVTCGSFHT 202
D V VTCG ++T
Sbjct: 351 -DKQLQVKAVTCGPWNT 366
Score = 45.4 bits (106), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 96/232 (41%), Gaps = 55/232 (23%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
++ ++ G +L +D AG ++ WG G +L + P + G + +
Sbjct: 158 LRARQLELGAEHALLLDAAGQVFSWGGG---RHGQLGHGTLEAELEPRLLEALQGLVMAE 214
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGL--------GDRESRLRPKIIET 183
VA G H V + G+ Y WG N +GQL L G+ +R ++ E
Sbjct: 215 VAAGGWHSVCVSETGD--------IYIWGWNESGQLALPTRNLAEDGETVAREATELNED 266
Query: 184 FNQ-------------------------DSPWA--VYEVTCGSFHTALLTHRKRPNDMLE 216
+Q D P + +CGS HTA++T R ++
Sbjct: 267 GSQVKRTGGAEDGAPAPFIAVQPFPALLDLPMGSDAVKASCGSRHTAVVT---RTGEL-- 321
Query: 217 SMCWTFGLGENGQLGHGTTQSALVPEQVKE-LPQYVYLVSVDCGLFHTSVVS 267
+T+G G+ GQLGH T S P +V+ + + + + +V CG ++T V +
Sbjct: 322 ---YTWGWGKYGQLGHEDTTSLDRPRRVEYFVDKQLQVKAVTCGPWNTYVYA 370
>sp|Q8K1R7|NEK9_MOUSE Serine/threonine-protein kinase Nek9 OS=Mus musculus GN=Nek9 PE=1
SV=2
Length = 984
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 75/296 (25%), Positives = 117/296 (39%), Gaps = 53/296 (17%)
Query: 74 ICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSS---FTPSPVWDFHGHTVV 130
I V G ++ + + G L+ +G+ D G VS P + F + V
Sbjct: 428 IHQVSCGDDFTVCVTDEGQLYAFGS----DYYGCMGVDKVSGPEVLEPMQLNFFLSNPVE 483
Query: 131 KVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPW 190
+V+CG HVV L E Y SWG G+LGL E P+ + D P
Sbjct: 484 QVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQRV-----DVPK 530
Query: 191 A--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKEL 247
A + V CG T LLT + GL E +LG S ++ E E+
Sbjct: 531 ALIIVAVQCGCDGTFLLTQSGK--------VLACGLNEFNKLGLNQCMSGIINHEAYHEV 582
Query: 248 P-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGD 296
P + + ++ G HT+ + G + ++G K C + +
Sbjct: 583 PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGVGNYKKRL 638
Query: 297 AISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKT 352
I+ + GP G K ++V+CG T+ TDD + +++WG G +G L T
Sbjct: 639 GINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAMTPT 687
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 127/315 (40%), Gaps = 75/315 (23%)
Query: 100 PLPDSSTEGGFSLVSSFTPSP-VWDFHGHT-----VVKVACGSEHVVALVSAGETYKGED 153
P + TE ++V+S T VW T V+K C + V A G T+
Sbjct: 329 PRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA----GNTHFAVV 384
Query: 154 LV---CYSW-----GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
V Y+W G +GQLG GD+ S +PK +E A+++V+CG T +
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK---AIHQVSCGDDFTVCV 441
Query: 206 T------------------HRKRPNDMLESM----------------------------C 219
T + ++LE M
Sbjct: 442 TDEGQLYAFGSDYYGCMGVDKVSGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEV 501
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE G+LG + + P++V ++P+ + +V+V CG T +++ +G V + G+ +
Sbjct: 502 YSWGCGEYGRLGLDSEEDYYTPQRV-DVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 280 ----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
GL C + + +EA + P S F +A G HT + + G +
Sbjct: 561 FNKLGLNQC-MSGIINHEAYHEV-PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERG-R 617
Query: 336 LWSWGRGRSGVLGTG 350
L ++G + G LG G
Sbjct: 618 LLTFGCNKCGQLGVG 632
Score = 49.3 bits (116), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 82/172 (47%), Gaps = 16/172 (9%)
Query: 194 EVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQYVYL 253
+V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q +
Sbjct: 373 QVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QGKAI 428
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHGPKF 313
V CG T V+ G ++++G + + + + + + P+ ++
Sbjct: 429 HQVSCGDDFTVCVTDEGQLYAFGSDYYGCM----GVDKVSGPEVLEPMQLNFF------L 478
Query: 314 QDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+PV QV+CG H V++T + +++SWG G G LG D++ P V P
Sbjct: 479 SNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYYTPQRVDVP 529
>sp|Q8TD19|NEK9_HUMAN Serine/threonine-protein kinase Nek9 OS=Homo sapiens GN=NEK9 PE=1
SV=2
Length = 979
Score = 59.7 bits (143), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 98/243 (40%), Gaps = 46/243 (18%)
Query: 124 FHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIET 183
F + V +V+CG HVV L E Y SWG G+LGL E P+ +
Sbjct: 477 FLSNPVEQVSCGDNHVVVLTRNKEVY--------SWGCGEYGRLGLDSEEDYYTPQKV-- 526
Query: 184 FNQDSPWA--VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP 241
D P A + V CG T LLT + GL E +LG S ++
Sbjct: 527 ---DVPKALIIVAVQCGCDGTFLLTQSGK--------VLACGLNEFNKLGLNQCMSGIIN 575
Query: 242 -EQVKELP-----------QYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASL 289
E E+P + + ++ G HT+ + G + ++G K C +
Sbjct: 576 HEAYHEVPYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERGRLLTFGCNK----CGQLGV 631
Query: 290 TRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ I+ + GP G K ++V+CG T+ TDD + +++WG G +G L
Sbjct: 632 GNYKKRLGINLL----GGPLGGK--QVIRVSCGDEFTIAATDDNH-IFAWGNGGNGRLAM 684
Query: 350 GKT 352
T
Sbjct: 685 TPT 687
Score = 52.4 bits (124), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 126/315 (40%), Gaps = 75/315 (23%)
Query: 100 PLPDSSTEGGFSLVSSFTPSP-VWDFHGHT-----VVKVACGSEHVVALVSAGETYKGED 153
P + TE ++V+S T VW T V+K C + V A G T+
Sbjct: 329 PRSSTVTEAPIAVVTSRTSEVYVWGGGKSTPQKLDVIKSGCSARQVCA----GNTHFAVV 384
Query: 154 LV---CYSW-----GANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALL 205
V Y+W G +GQLG GD+ S +PK +E A+ +V+CG T +
Sbjct: 385 TVEKELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKLQGK---AIRQVSCGDDFTVCV 441
Query: 206 THRKR------------------PNDMLESM----------------------------C 219
T + ++LE M
Sbjct: 442 TDEGQLYAFGSDYYGCMGVDKVAGPEVLEPMQLNFFLSNPVEQVSCGDNHVVVLTRNKEV 501
Query: 220 WTFGLGENGQLGHGTTQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEK 279
+++G GE G+LG + + P++V ++P+ + +V+V CG T +++ +G V + G+ +
Sbjct: 502 YSWGCGEYGRLGLDSEEDYYTPQKV-DVPKALIIVAVQCGCDGTFLLTQSGKVLACGLNE 560
Query: 280 ----GLGLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYK 335
GL C + + +EA + P S F +A G HT + + G +
Sbjct: 561 FNKLGLNQC-MSGIINHEAYHEV-PYTTSFTLAKQLSFYKIRTIAPGKTHTAAIDERG-R 617
Query: 336 LWSWGRGRSGVLGTG 350
L ++G + G LG G
Sbjct: 618 LLTFGCNKCGQLGVG 632
Score = 49.7 bits (117), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 16/175 (9%)
Query: 191 AVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY 250
+ +V G+ H A++T K ++ + G +GQLGHG S P+ V++L Q
Sbjct: 370 SARQVCAGNTHFAVVTVEK---ELYTWVNMQGGTKLHGQLGHGDKASYRQPKHVEKL-QG 425
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISGNGPHG 310
+ V CG T V+ G ++++G + + + + + + P+ ++
Sbjct: 426 KAIRQVSCGDDFTVCVTDEGQLYAFGSDYYGCM----GVDKVAGPEVLEPMQLNFF---- 477
Query: 311 PKFQDPV-QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIVLWP 364
+PV QV+CG H V++T + +++SWG G G LG D++ P V P
Sbjct: 478 --LSNPVEQVSCGDNHVVVLTRN-KEVYSWGCGEYGRLGLDSEEDYYTPQKVDVP 529
>sp|P21827|RCC1_YEAST Guanine nucleotide exchange factor SRM1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SRM1 PE=1 SV=1
Length = 482
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 124/293 (42%), Gaps = 44/293 (15%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG--GF---SLVSSFTPSPVWDFHGH 127
K+ + A MS A+ + G ++ WG EG GF + TP V F +
Sbjct: 166 KVVQLAATDNMSCALFSNGEVYAWGTF----RCNEGILGFYQDKIKIQKTPWKVPTFSKY 221
Query: 128 TVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQD 187
+V++A G +H++ L G + ++WG QLG E R R K ++
Sbjct: 222 NIVQLAPGKDHILFLDEEG--------MVFAWGNGQQNQLGRKVME-RFRLKTLDP---- 268
Query: 188 SPWAVYEV---TCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLG--HGTTQSALVPE 242
P+ + V G H LT + N ++ ++GL + GQ G ALV +
Sbjct: 269 RPFGLRHVKYIASGENHCFALT---KDNKLV-----SWGLNQFGQCGVSEDVEDGALVTK 320
Query: 243 QVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG----MEKGLGLCPNASLTRNEAGDA 297
+ LP V + S+ G H+ ++S GD++S G E G+ T +
Sbjct: 321 PKRLALPDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGK 380
Query: 298 ISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTG 350
+ + + PKF+ VA G+ H+V V +G +SWG G + +G G
Sbjct: 381 ARAVPLPTKLNNVPKFK---SVAAGSHHSVAVAQNGIA-YSWGFGETYAVGLG 429
Score = 32.3 bits (72), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 44/181 (24%), Positives = 67/181 (37%), Gaps = 27/181 (14%)
Query: 35 LGFSGSNSLVPCVIEQFLTIGAPDSLEDDSKTNHKAPIK------ICSVKAGGMMSLAID 88
+ N LV + QF G + +ED + + I S+ AG SL +
Sbjct: 287 FALTKDNKLVSWGLNQFGQCGVSEDVEDGALVTKPKRLALPDNVVIRSIAAGEHHSLILS 346
Query: 89 NAGALWMWGNCPL------PDSSTEGGFSLV---SSFTPSPVWDFHGHTVVKVACGSEHV 139
G L+ G + D+ E + V + P P + VA GS H
Sbjct: 347 QDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVPKFKSVAAGSHHS 406
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLG--DRESRLRPKIIETFNQDSPWAVYEVTC 197
VA+ G + YSWG +GLG + ++ + +I T QD + V C
Sbjct: 407 VAVAQNG--------IAYSWGFGETYAVGLGPFEDDTEVPTRIKNTATQDH--NIILVGC 456
Query: 198 G 198
G
Sbjct: 457 G 457
>sp|Q91ZR4|NEK8_MOUSE Serine/threonine-protein kinase Nek8 OS=Mus musculus GN=Nek8 PE=1
SV=1
Length = 698
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 131/288 (45%), Gaps = 43/288 (14%)
Query: 72 IKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVK 131
+ I V G + + + + G + +G+ + G +L P+ V G+ +V+
Sbjct: 397 VTIKHVACGDLFTACLTDRGIIMTFGSG---SNGCLGHGNLTDISQPTIVEALLGYEMVQ 453
Query: 132 VACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWA 191
VACG+ HV+AL + GE ++WG + G+LGLG RES P+ +
Sbjct: 454 VACGASHVLALSTDGEL--------FAWGRGDGGRLGLGTRESHNCPQQVPVAPGQE--- 502
Query: 192 VYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVP-EQVKELPQY 250
V CG + +LT P +L C + + G L H + VP +QV+E +
Sbjct: 503 AQRVVCGIDSSMILTS---PGRVLA--CGSNRFNKLG-LDHLSLDEEPVPYQQVEEALSF 556
Query: 251 VYLVS----------VDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISP 300
L S VD G H++ ++++GD +++G + + L + + +P
Sbjct: 557 TPLGSAPLDQEPLLCVDLGTAHSAAITASGDCYTFGSNQ------HGQLGTSSRRVSRAP 610
Query: 301 ILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
+ G G K V VACG A TV V +G +++SWG+G G LG
Sbjct: 611 CRVQGL--EGIKM---VMVACGDAFTVAVGAEG-EVYSWGKGTRGRLG 652
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 13/125 (10%)
Query: 83 MSLAIDNAGALWMWGNCPLPDSSTEGGFSLVS---SFTPSPVWDFHGHTVVKVACGSEHV 139
+ L ++ A+ G+C S+ G S S P V G +V VACG
Sbjct: 572 VDLGTAHSAAITASGDCYTFGSNQHGQLGTSSRRVSRAPCRVQGLEGIKMVMVACGDAFT 631
Query: 140 VALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGS 199
VA+ + GE Y SWG G+LG D ++ L P+ ++ ++ P+ V V+C
Sbjct: 632 VAVGAEGEVY--------SWGKGTRGRLGRRDEDAGL-PRPVQ-LDETHPYMVTSVSCCH 681
Query: 200 FHTAL 204
+T L
Sbjct: 682 GNTLL 686
Score = 33.5 bits (75), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 318 QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPAIV 361
VACG T +TD G + ++G G +G LG G D P IV
Sbjct: 401 HVACGDLFTACLTDRGI-IMTFGSGSNGCLGHGNLTDISQPTIV 443
>sp|Q80YD6|SRGEF_MOUSE Secretion-regulating guanine nucleotide exchange factor OS=Mus
musculus GN=Sergef PE=2 SV=2
Length = 464
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 110/273 (40%), Gaps = 79/273 (28%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKIIETFNQDS 188
+ + +C SE V A V ++WGAN+ GQLGLG +E P+ + F Q
Sbjct: 1 MARESCASETVSAAA-----------VLFAWGANSYGQLGLGHKEDVFLPQQLSDFCQAG 49
Query: 189 PWAVYEVTCGSFHTALLT-------------------HRK-----------RPNDMLESM 218
+ VT G H+A++T H + R + +
Sbjct: 50 --CIKSVTGGGGHSAVVTDGGDLFVCGLNKDGQLGLGHTEEVLRFTICKPLRGCPIRQVA 107
Query: 219 C-WTFGL-----------GEN--GQLG--HGTTQSALVPEQVKELPQYVYLVSVDCGLFH 262
C W F + G N GQLG HG + +VP+ ++ L + V V V GL H
Sbjct: 108 CGWDFTIMLTEKGQVLSCGSNAFGQLGVPHG-PRKCVVPQAIECLREKV--VCVAAGLRH 164
Query: 263 TSVVSSAGDVWSWGM---EKGLGLCPNASLTRNEAGDAISPILISGNGPH---GPKFQDP 316
++ G V+ WG G LCP +L P+ ++ P G +
Sbjct: 165 ALATTATGSVFQWGTGLASSGRRLCPGQNL----------PLFLTAKEPSRVTGLENSTA 214
Query: 317 VQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
V G+ H+ +TD G +L+ WGR + G L +
Sbjct: 215 VCAVAGSDHSASLTDTG-ELYVWGRNKHGQLAS 246
Score = 49.3 bits (116), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 62/239 (25%), Positives = 91/239 (38%), Gaps = 57/239 (23%)
Query: 51 FLTIGAPDSLEDDSKTNHKAPIKICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEGGF 110
FLT P + T + +C+V AG S ++ + G L++WG + G
Sbjct: 197 FLTAKEPSRV-----TGLENSTAVCAV-AGSDHSASLTDTGELYVWGR------NKHGQL 244
Query: 111 SLVSSFTPSP----VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
+ + F P P F V V G H+VA G+ + +WG + GQ
Sbjct: 245 ASRAVFLPLPQRIEAHYFQDEKVTAVWSGWTHLVAKTETGKVF--------TWGRADYGQ 296
Query: 167 LGLGDRESRLRP-KIIETFNQDSPWA-----------------VYEVTCGSFHTALLTHR 208
LG RL P + + QDS A E++CGS H +
Sbjct: 297 LG-----RRLEPPEAQKPVEQDSSLAFQGPQNSVPSPLHCLTGATEISCGSEHNLAVIRD 351
Query: 209 KRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKELPQY-VYLVSVDCGLFHTSVV 266
K C ++G E+G G GT + P V+ LP L+ V CG H+ V
Sbjct: 352 K---------CCSWGWNEHGMCGDGTESNVWTPTPVQALPPSPSRLLLVGCGAGHSLAV 401
>sp|Q3MHW0|SRGEF_BOVIN Secretion-regulating guanine nucleotide exchange factor OS=Bos
taurus GN=SERGEF PE=2 SV=1
Length = 464
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 98/250 (39%), Gaps = 78/250 (31%)
Query: 157 YSWGANNNGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLE 216
++WGAN+ GQLGLG +E L + + F + + +T G H+A++T E
Sbjct: 18 FAWGANSYGQLGLGHKEDVLSAQQLSDFCKSG--CIKRITGGGGHSAVVTD--------E 67
Query: 217 SMCWTFGLGENGQLGHGTTQSAL------------------------------------- 239
+ GL ++GQLG G T+ L
Sbjct: 68 GSLFVCGLNKDGQLGLGHTEEVLYFTPCKSLLGCAIQQVACGWDFTIILTENGQVLSCGS 127
Query: 240 -------VPEQVKE--LPQYVYL-----VSVDCGLFHTSVVSSAGDVWSWGM---EKGLG 282
VP + +PQ + L VS+ GL H +++G V+ WG G
Sbjct: 128 NSFGQLGVPHGPRRCVIPQAIELLREKVVSIAAGLRHALAATASGTVFQWGTGLASSGRR 187
Query: 283 LCPNASLTRNEAGDAISPILISGNGPH---GPKFQDPVQVACGAAHTVLVTDDGYKLWSW 339
LCP +L P+ ++ P G + V V G+ H+ +TD G +L+ W
Sbjct: 188 LCPGQTL----------PLFLTAKEPSTVTGLENSQAVCVLAGSDHSASLTDAG-ELYVW 236
Query: 340 GRGRSGVLGT 349
G + G L +
Sbjct: 237 GSNKHGQLAS 246
Score = 40.4 bits (93), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 106/288 (36%), Gaps = 73/288 (25%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGN---------CP---LPDSSTEGGFSLVSSFTPSP 120
K+ S+ AG +LA +G ++ WG CP LP +++ PS
Sbjct: 154 KVVSIAAGLRHALAATASGTVFQWGTGLASSGRRLCPGQTLP--------LFLTAKEPST 205
Query: 121 VWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRPKI 180
V V V GS+H +L AGE Y WG+N +GQL L P+
Sbjct: 206 VTGLENSQAVCVLAGSDHSASLTDAGEL--------YVWGSNKHGQLA-SQAAFLLLPQR 256
Query: 181 IET--FNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
IE F + AV+ G H T + +T+G + GQLG T ++
Sbjct: 257 IEARCFQNEKIAAVWS---GWTHLVAQT--------VTGKVFTWGRADYGQLGR-TVETR 304
Query: 239 LVPEQVKE----------------LPQYVYLVSVDCGLFHT-SVVSSAGDVWSWGMEKGL 281
E K+ LP + CG H +V+ W W
Sbjct: 305 EGWESEKQDPSLPGSGPQKGTPSCLPCLTGATEISCGSEHNLAVIGGVCHSWGWNEH--- 361
Query: 282 GLCPNASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLV 329
G+C + + D +P + G +F + V CGA H++ +
Sbjct: 362 GMCGDGT-----EADVWAPKPVPGL-----RFFLGLHVGCGAGHSLAL 399
Score = 39.3 bits (90), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 97/252 (38%), Gaps = 47/252 (18%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQLGLGDRESRLRP----KIIETF 184
VV +A G H +A ++G ++ WG GL RL P + T
Sbjct: 155 VVSIAAGLRHALAATASGTVFQ--------WGT------GLASSGRRLCPGQTLPLFLTA 200
Query: 185 NQDSPWAVYE------VTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSA 238
+ S E V GS H+A LT D E W G ++GQL +Q+A
Sbjct: 201 KEPSTVTGLENSQAVCVLAGSDHSASLT------DAGELYVW--GSNKHGQL---ASQAA 249
Query: 239 --LVPEQVK-ELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAG 295
L+P++++ Q + +V G H + G V++WG L
Sbjct: 250 FLLLPQRIEARCFQNEKIAAVWSGWTHLVAQTVTGKVFTWGRADYGQLGRTVETREGWES 309
Query: 296 DAISPILISGNGPHG------PKFQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLGT 349
+ P L G+GP P +++CG+ H + V G SWG G+ G
Sbjct: 310 EKQDPSL-PGSGPQKGTPSCLPCLTGATEISCGSEHNLAVI--GGVCHSWGWNEHGMCGD 366
Query: 350 GKTIDFFAPAIV 361
G D +AP V
Sbjct: 367 GTEADVWAPKPV 378
>sp|O75592|MYCB2_HUMAN Probable E3 ubiquitin-protein ligase MYCBP2 OS=Homo sapiens
GN=MYCBP2 PE=1 SV=3
Length = 4640
Score = 53.9 bits (128), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 59/126 (46%), Gaps = 20/126 (15%)
Query: 107 EGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQ 166
E S ++++ P V V+V+CG H V L+ G+ Y ++G +GQ
Sbjct: 882 EKDASKITTYPPGSVRFDCELRAVQVSCGFHHSVVLMENGDVY--------TFGYGQHGQ 933
Query: 167 LGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGE 226
LG GD SR P +++ P +VT GS HTA+L +++ +TFG
Sbjct: 934 LGHGDVNSRGCPTLVQAL----PGPSTQVTAGSNHTAVL--------LMDGQVFTFGSFS 981
Query: 227 NGQLGH 232
GQLG
Sbjct: 982 KGQLGR 987
Score = 45.8 bits (107), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 10/90 (11%)
Query: 187 DSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGHGTTQSALVPEQVKE 246
D +V+CG H+ +L M +TFG G++GQLGHG S P V+
Sbjct: 899 DCELRAVQVSCGFHHSVVL--------MENGDVYTFGYGQHGQLGHGDVNSRGCPTLVQA 950
Query: 247 LPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
LP V G HT+V+ G V+++G
Sbjct: 951 LPGPS--TQVTAGSNHTAVLLMDGQVFTFG 978
Score = 36.2 bits (82), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 84 SLAIDNAGALWMWGNCPLPDSSTEGGFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALV 143
S I G L+M+G + S + S V D GH V +VA G H L+
Sbjct: 612 SSVISKDGELYMFGK------------DAIYSDSSSLVTDLKGHFVTQVAMGKAHTCVLM 659
Query: 144 SAGETYKGEDLVCYSWGANNNGQLG 168
GE +++G NN GQ G
Sbjct: 660 KNGEV--------WTFGVNNKGQCG 676
Score = 33.1 bits (74), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 43/96 (44%), Gaps = 15/96 (15%)
Query: 254 VSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPNASLTRNEAGDAISPILISG-NGPHGPK 312
V V CG H+ V+ GDV+++G + + L + P L+ GP
Sbjct: 905 VQVSCGFHHSVVLMENGDVYTFGYGQ------HGQLGHGDVNSRGCPTLVQALPGPS--- 955
Query: 313 FQDPVQVACGAAHTVLVTDDGYKLWSWGRGRSGVLG 348
QV G+ HT ++ DG +++++G G LG
Sbjct: 956 ----TQVTAGSNHTAVLLMDG-QVFTFGSFSKGQLG 986
>sp|Q54X24|RCCDA_DICDI RCC1 domain-containing protein DDB_G0279253 OS=Dictyostelium
discoideum GN=DDB_G0279253 PE=4 SV=1
Length = 512
Score = 51.6 bits (122), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 60/122 (49%), Gaps = 14/122 (11%)
Query: 251 VYLVSVDCGLFHTSVVSSAGDVWSWGMEKGLGLCPN--------ASLTRNEAGDAISPIL 302
+ +VSV CG+ H+ +SS DV+ WG K G N ++ N D P++
Sbjct: 231 IRIVSVSCGMRHSIALSSENDVYGWGCNK-FGQLSNLIDGNSLKSNNNNNNINDIADPMV 289
Query: 303 ISGNGPHGPKFQDPV---QVACGAAHTVLVTDDGYKLWSWGRGRSGVLGTGKTIDFFAPA 359
+ P F++ + Q++CG HT+L+ + + S+G+ + G LG G ID P
Sbjct: 290 --QDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFGQNKFGQLGNGNFIDQSNPC 347
Query: 360 IV 361
++
Sbjct: 348 VI 349
Score = 40.4 bits (93), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 69/175 (39%), Gaps = 42/175 (24%)
Query: 129 VVKVACGSEHVVALVSAGETYKGEDLVCYSWGANNNGQL-GLGDRES-------RLRPKI 180
+V V+CG H +AL S + Y WG N GQL L D S I
Sbjct: 233 IVSVSCGMRHSIALSSENDV--------YGWGCNKFGQLSNLIDGNSLKSNNNNNNINDI 284
Query: 181 IETFNQDSP--------WAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQLGH 232
+ QDSP + +++CG HT LL D+ +FG + GQLG+
Sbjct: 285 ADPMVQDSPKLINFKNEIKIIQISCGFQHTLLL-------DINFKNVLSFGQNKFGQLGN 337
Query: 233 GT-----------TQSALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWG 276
G S ++P + + + + CG ++ ++++ ++ G
Sbjct: 338 GNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQDKLYICG 392
Score = 35.4 bits (80), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 85/199 (42%), Gaps = 22/199 (11%)
Query: 171 DRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFGLGENGQL 230
+R++ PK+IE ++ + V+CG H+ L+ ND+ C FG N
Sbjct: 213 ERKNLNEPKLIEIL-FNNKIRIVSVSCGMRHSIALSSE---NDVYGWGCNKFGQLSNLID 268
Query: 231 GHGTTQSA-------LVPEQVKELPQYVY------LVSVDCGLFHTSVVS-SAGDVWSWG 276
G+ + + V++ P+ + ++ + CG HT ++ + +V S+G
Sbjct: 269 GNSLKSNNNNNNINDIADPMVQDSPKLINFKNEIKIIQISCGFQHTLLLDINFKNVLSFG 328
Query: 277 MEKGLGLCPNASLT--RNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
K G N + N IS ++ + ++ CG +++ L+T+
Sbjct: 329 QNK-FGQLGNGNFIDQSNPCVIDISSFILPTSTSKSLNDIKIKEIQCGWSNSCLLTNQD- 386
Query: 335 KLWSWGRGRSGVLGTGKTI 353
KL+ GRG G+LG + +
Sbjct: 387 KLYICGRGEYGILGDNRDL 405
>sp|P52499|RCC1_CANAX Protein RCC1 OS=Candida albicans GN=RCC1 PE=3 SV=1
Length = 464
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 78/307 (25%), Positives = 120/307 (39%), Gaps = 74/307 (24%)
Query: 73 KICSVKAGGMMSLAIDNAGALWMWGNCPLPDSSTEG------------------------ 108
KI GGM +LA+D +W WG DS G
Sbjct: 66 KIVDFAVGGMHTLALDGKNRIWSWGGN---DSEVLGRDTCQAKEVLKDIDGKNGNDDDDD 122
Query: 109 ---GFSLVSSFTPSPVWDFHGHTVVKVACGSEHVVALVSAGETYKGEDLVCYSWGAN--N 163
G + TP+ V + +V++A AL+S G+ YSWG N
Sbjct: 123 DEDGDLNEAESTPALVENLPEGEIVQLAATDNLSAALLSNGD--------VYSWGCFRCN 174
Query: 164 NGQLGLGDRESRLRPKIIETFNQDSPWAVYEVTCGSFHTALLTHRKRPNDMLESMCWTFG 223
G LG E +L Q +P + E+ H ++ K L+S W G
Sbjct: 175 EGLLGFLRDEIKL---------QKTPLKIKELKK---HCPIMRSVKIILLALDSKEWMPG 222
Query: 224 L-GENGQLGHGTTQS----ALVPEQVKELPQYVYLVSVDCGLFHTSVVSSAGDVWSWGME 278
+ G+ QLG + +L P+Q L Y+ S D FH + + +V++WG+
Sbjct: 223 VNGQQYQLGRRILERHRYRSLEPQQFG-LYNIKYIASGD---FHCFAIDHSHNVYAWGLN 278
Query: 279 KGLGLCP----NASLTRNEAGDAISPILISGNGPHGPKFQDPVQVACGAAHTVLVTDDGY 334
+ G C N L + + P LI G K ++A G HT+ +T+DG
Sbjct: 279 Q-YGQCALTGDNGEL--EDGSVLMKPTLIPELSHKGIK-----EIAAGEHHTLALTEDG- 329
Query: 335 KLWSWGR 341
++++WGR
Sbjct: 330 QVYAWGR 336
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 199,064,055
Number of Sequences: 539616
Number of extensions: 8827399
Number of successful extensions: 21831
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 41
Number of HSP's that attempted gapping in prelim test: 20698
Number of HSP's gapped (non-prelim): 442
length of query: 504
length of database: 191,569,459
effective HSP length: 122
effective length of query: 382
effective length of database: 125,736,307
effective search space: 48031269274
effective search space used: 48031269274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)