Query 010685
Match_columns 504
No_of_seqs 449 out of 2690
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 12:06:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydy_A Glycerophosphoryl diest 100.0 6E-49 2.1E-53 407.1 22.1 287 89-392 28-355 (356)
2 3qvq_A Phosphodiesterase OLEI0 100.0 5.6E-46 1.9E-50 367.3 23.6 241 84-394 2-249 (252)
3 2pz0_A Glycerophosphoryl diest 100.0 6.2E-46 2.1E-50 366.9 21.9 233 91-393 11-249 (252)
4 2oog_A Glycerophosphoryl diest 100.0 5.6E-46 1.9E-50 373.9 20.6 250 81-393 12-279 (287)
5 2otd_A Glycerophosphodiester p 100.0 4.7E-45 1.6E-49 359.3 21.7 232 91-392 6-244 (247)
6 3l12_A Putative glycerophospho 100.0 4E-44 1.4E-48 364.7 25.4 261 90-394 16-307 (313)
7 3ks6_A Glycerophosphoryl diest 100.0 1.6E-44 5.5E-49 356.5 18.8 240 91-397 2-246 (250)
8 3ch0_A Glycerophosphodiester p 100.0 1.2E-43 4.2E-48 353.7 23.5 245 91-389 8-270 (272)
9 2o55_A Putative glycerophospho 100.0 1.8E-43 6.1E-48 350.2 22.2 236 90-393 5-254 (258)
10 3mz2_A Glycerophosphoryl diest 100.0 1E-42 3.5E-47 351.0 22.7 253 83-397 23-280 (292)
11 1zcc_A Glycerophosphodiester p 100.0 3.3E-44 1.1E-48 353.8 10.9 229 92-397 2-237 (248)
12 3no3_A Glycerophosphodiester p 100.0 1.3E-42 4.3E-47 340.6 19.0 224 90-394 3-235 (238)
13 1o1z_A GDPD, glycerophosphodie 100.0 9.9E-42 3.4E-46 333.4 17.0 221 90-391 11-233 (234)
14 1vd6_A Glycerophosphoryl diest 100.0 8E-42 2.7E-46 331.7 16.2 215 89-391 5-222 (224)
15 3i10_A Putative glycerophospho 100.0 1.7E-40 5.9E-45 332.2 20.3 252 87-394 13-273 (278)
16 1xx1_A Smase I, sphingomyelina 100.0 1.9E-32 6.4E-37 274.7 11.4 227 90-394 4-263 (285)
17 2otd_A Glycerophosphodiester p 99.9 2.8E-23 9.6E-28 203.9 7.6 95 406-503 5-101 (247)
18 2pz0_A Glycerophosphoryl diest 99.9 2.6E-23 8.9E-28 204.9 6.9 94 407-503 11-106 (252)
19 3qvq_A Phosphodiesterase OLEI0 99.9 7.8E-23 2.7E-27 201.6 7.0 96 405-503 7-104 (252)
20 2oog_A Glycerophosphoryl diest 99.8 6.8E-22 2.3E-26 198.4 6.9 98 403-503 19-127 (287)
21 1zcc_A Glycerophosphodiester p 99.8 1.4E-21 4.8E-26 192.1 8.5 86 408-503 2-89 (248)
22 1ydy_A Glycerophosphoryl diest 99.8 1.3E-21 4.3E-26 202.3 7.3 89 405-500 28-116 (356)
23 3rlg_A Sphingomyelin phosphodi 99.8 1.6E-20 5.5E-25 186.1 14.1 226 89-395 25-281 (302)
24 2o55_A Putative glycerophospho 99.8 3.6E-21 1.2E-25 190.1 8.6 63 405-467 4-71 (258)
25 3l12_A Putative glycerophospho 99.8 4.6E-21 1.6E-25 194.7 9.4 68 397-464 7-74 (313)
26 1o1z_A GDPD, glycerophosphodie 99.8 1.7E-21 5.8E-26 190.0 5.9 62 405-466 10-71 (234)
27 3i10_A Putative glycerophospho 99.8 3.5E-21 1.2E-25 192.4 7.4 96 404-503 14-111 (278)
28 3ch0_A Glycerophosphodiester p 99.8 3.6E-21 1.2E-25 191.3 7.2 98 406-503 7-121 (272)
29 3ks6_A Glycerophosphoryl diest 99.8 2.4E-21 8.1E-26 190.8 4.8 73 407-482 2-74 (250)
30 3mz2_A Glycerophosphoryl diest 99.8 3E-20 1E-24 187.0 7.5 96 404-503 28-126 (292)
31 1vd6_A Glycerophosphoryl diest 99.8 7.3E-20 2.5E-24 177.1 5.5 56 405-460 5-60 (224)
32 3no3_A Glycerophosphodiester p 99.8 3E-19 1E-23 174.5 7.6 56 406-461 3-60 (238)
33 1xx1_A Smase I, sphingomyelina 99.6 9.8E-16 3.4E-20 153.1 4.4 68 406-501 4-75 (285)
34 3rlg_A Sphingomyelin phosphodi 98.5 9.6E-08 3.3E-12 94.8 4.9 50 408-464 29-81 (302)
35 1djx_A PLC-D1, phosphoinositid 92.4 0.087 3E-06 57.8 4.4 50 411-460 177-229 (624)
36 2zkm_X 1-phosphatidylinositol- 91.5 0.12 4.2E-06 58.2 4.5 53 408-460 322-379 (799)
37 1djx_A PLC-D1, phosphoinositid 91.5 0.12 3.9E-06 56.8 4.1 50 95-146 177-229 (624)
38 2zkm_X 1-phosphatidylinositol- 90.9 0.14 4.9E-06 57.7 4.2 50 95-146 325-379 (799)
39 3qr0_A Phospholipase C-beta (P 90.4 0.17 5.9E-06 57.0 4.3 54 407-460 332-388 (816)
40 3qr0_A Phospholipase C-beta (P 89.7 0.2 6.8E-06 56.5 4.1 50 95-146 336-388 (816)
41 3ohm_B 1-phosphatidylinositol- 87.2 0.31 1.1E-05 55.4 3.6 53 408-460 326-383 (885)
42 3ohm_B 1-phosphatidylinositol- 84.9 0.4 1.4E-05 54.5 2.9 50 95-146 329-383 (885)
43 3h4x_A Phosphatidylinositol-sp 66.3 8.3 0.00028 38.5 6.0 50 92-147 32-82 (339)
44 3kts_A Glycerol uptake operon 64.3 31 0.0011 31.7 9.2 141 203-386 38-182 (192)
45 1to3_A Putative aldolase YIHT; 63.6 23 0.00078 34.9 8.7 98 330-441 145-253 (304)
46 2qjg_A Putative aldolase MJ040 61.1 20 0.0007 34.1 7.7 101 330-441 135-236 (273)
47 3glc_A Aldolase LSRF; TIM barr 59.6 27 0.00091 34.3 8.3 92 330-441 161-256 (295)
48 3fok_A Uncharacterized protein 56.8 11 0.00037 37.4 4.8 97 330-441 166-272 (307)
49 3f4w_A Putative hexulose 6 pho 52.9 59 0.002 29.3 9.1 86 330-441 93-186 (211)
50 3nvt_A 3-deoxy-D-arabino-heptu 50.2 1.5E+02 0.0051 30.1 12.3 21 328-348 237-257 (385)
51 2ftp_A Hydroxymethylglutaryl-C 46.8 44 0.0015 32.6 7.5 98 330-444 127-237 (302)
52 2bdq_A Copper homeostasis prot 46.6 1.9E+02 0.0065 27.1 12.8 170 255-455 37-220 (224)
53 3h4x_A Phosphatidylinositol-sp 41.8 22 0.00076 35.4 4.4 51 406-460 30-81 (339)
54 2cw6_A Hydroxymethylglutaryl-C 35.7 52 0.0018 31.9 6.1 99 330-444 124-234 (298)
55 1w8s_A FBP aldolase, fructose- 32.2 1.4E+02 0.0048 28.4 8.4 99 330-441 128-230 (263)
56 1twd_A Copper homeostasis prot 29.4 1.3E+02 0.0045 28.8 7.4 154 255-441 37-197 (256)
57 1vkf_A Glycerol uptake operon 29.3 1.4E+02 0.005 27.1 7.4 138 204-386 41-180 (188)
58 1ydo_A HMG-COA lyase; TIM-barr 29.0 81 0.0028 30.9 6.2 99 330-444 125-235 (307)
59 2p10_A MLL9387 protein; putati 29.0 1.4E+02 0.0047 29.2 7.6 87 330-439 153-256 (286)
60 3ble_A Citramalate synthase fr 28.6 59 0.002 32.3 5.2 99 330-444 140-247 (337)
61 3o27_A Putative uncharacterize 26.6 38 0.0013 25.7 2.4 44 95-140 14-59 (68)
62 1zco_A 2-dehydro-3-deoxyphosph 26.5 4.2E+02 0.014 25.1 11.8 20 328-347 118-137 (262)
63 1ydn_A Hydroxymethylglutaryl-C 25.6 95 0.0032 29.9 5.9 98 330-443 123-232 (295)
64 2nx9_A Oxaloacetate decarboxyl 23.7 1.5E+02 0.0052 30.8 7.4 96 330-444 130-235 (464)
65 3qja_A IGPS, indole-3-glycerol 23.3 3.7E+02 0.013 25.6 9.6 137 206-383 41-189 (272)
66 1rqb_A Transcarboxylase 5S sub 22.1 3.2E+02 0.011 29.0 9.5 98 330-444 147-254 (539)
67 1tqj_A Ribulose-phosphate 3-ep 20.9 40 0.0014 31.5 2.1 29 421-452 16-44 (230)
68 1yxy_A Putative N-acetylmannos 20.8 2.9E+02 0.0099 25.0 8.1 99 330-445 8-111 (234)
69 3kts_A Glycerol uptake operon 20.7 63 0.0021 29.6 3.3 57 329-393 43-99 (192)
70 1tqj_A Ribulose-phosphate 3-ep 20.2 49 0.0017 30.9 2.5 29 105-138 16-44 (230)
No 1
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=100.00 E-value=6e-49 Score=407.14 Aligned_cols=287 Identities=21% Similarity=0.333 Sum_probs=215.8
Q ss_pred CCCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCC
Q 010685 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (504)
Q Consensus 89 ~~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~ 168 (504)
+.+|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++...||+++++ +|.
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~~f~~~~~~---~g~- 101 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGAD--YLEQDLVMTKDDNLVVLHDHYLDRVTDVADRFPDRARK---DGR- 101 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSBCTTTBSHHHHSTTCCCT---TSC-
T ss_pred CCCceEEEeCCCCCCCCcchHHHHHHHHHcCCC--EEEeeeEECCCCcEEEeCCChHHhhcCccccccccccc---CCC-
Confidence 567999999999999999999999999999999 99999999999999999999999999998888887653 443
Q ss_pred CCCcccccCCHHHHhcCcccCCccC--------CCCCCC---CCCcccCCHHHHHHHhC--------CCceEEeeccchh
Q 010685 169 TPGWFSIDYTLNDLSNIILNQGVYS--------RTDKFD---GNGFQILTVQDMARQIK--------PPGLWLNIQHDAF 229 (504)
Q Consensus 169 ~~g~~v~d~Tl~EL~~l~~~~~~~~--------r~~~~~---g~~~~IpTLeEvL~~~k--------~~~l~iEIK~~~~ 229 (504)
++|.|+||+||++|+++.|+.. ++..|. + .++||||+|+|++++ +.+++||||.+..
T Consensus 102 ---~~v~d~T~~eL~~l~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~iptL~evl~~~~~~~~~~~~~~~l~iEiK~~~~ 177 (356)
T 1ydy_A 102 ---YYAIDFTLDEIKSLKFTEGFDIENGKKVQTYPGRFPMGKS-DFRVHTFEEEIEFVQGLNHSTGKNIGIYPEIKAPWF 177 (356)
T ss_dssp ---CBGGGSCHHHHHHSCBCSCEEEETTEEEESSTTSSCTTCS-CCCCCBHHHHHHHHHHHHHHHSCCCEEEEEECCHHH
T ss_pred ---cchhhCcHHHHHhCCCCccccccccccccccccccccccC-CCcCCCHHHHHHHHHHhhhcccCCceEEEeecCccc
Confidence 5899999999999999986521 122332 2 479999999999985 4779999998765
Q ss_pred hhccchHHHHHHHHHHHhcCC------ceEecCCHHHHHHHHHhc----CCCCCcEEEEeccCCccC---------CCcc
Q 010685 230 YAQHNLSMRSFVLSVSRSVVV------NYISSPEVNFLRSIAARF----RPSMTKLVFRFLGKSEIE---------PTTN 290 (504)
Q Consensus 230 ~~~~~~~~~~~v~~~l~~~g~------~~isSfd~~~L~~l~~~~----~~~~~~lv~~ll~~~~~~---------~~~~ 290 (504)
....+..+++.++++++++++ ++|+||++..|+++++.. .| ..++++.+ ...... +..+
T Consensus 178 ~~~~~~~~~~~v~~~l~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~p~~~p-~~~~~~L~-~~~~~~~~~~~~~~~~~~~ 255 (356)
T 1ydy_A 178 HHQEGKDIAAKTLEVLKKYGYTGKDDKVYLQCFDADELKRIKNELEPKMGM-ELNLVQLI-AYTDWNETQQKQPDGSWVN 255 (356)
T ss_dssp HHHTTCCHHHHHHHHHHHTTCCSTTSSBEEEESCHHHHHHHHHTHHHHHTC-CCEEEEEE-CCGGGCCCEEECTTSCEEE
T ss_pred ccccchhHHHHHHHHHHHcCCCCCCCCEEEEcCCHHHHHHHHhhcccccCC-CceEEEEe-ccCcccccccccccccccc
Confidence 443344688999999999875 489999999999999972 23 67888633 221110 0111
Q ss_pred ccHHHHH--hhHHHHHhhhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHH
Q 010685 291 QTYGSLL--KNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLS 368 (504)
Q Consensus 291 ~~y~~l~--~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~ 368 (504)
..|.++. ..+..+..++.+++|.+..+.+...+......+++|+.+|++|++|++||||++. .. .|..|+.+.+++
T Consensus 256 ~~~~~~~~~~~l~~~~~~a~~i~p~~~~~~~~~~~~~~~~~~~~v~~ah~~Gl~V~~WTvn~~~-l~-~~~~d~~~~~~~ 333 (356)
T 1ydy_A 256 YNYDWMFKPGAMKQVAEYADGIGPDYHMLIEETSQPGNIKLTGMVQDAQQNKLVVHPYTVRSDK-LP-EYTPDVNQLYDA 333 (356)
T ss_dssp CCCGGGGSTTHHHHHTTTCSEEEEBGGGTBCTTCBTTBCCBCSHHHHHHHTTCEECCBCBCTTS-CC-TTCSSHHHHHHH
T ss_pred cchhhhcchhhHHHHHhhCeEEccCHHHhccccccccccCCHHHHHHHHHCCCEEEEEEECccc-cc-ccccCHHHHHHH
Confidence 2344332 2466777788899988766543211101122467999999999999999999872 11 233355554465
Q ss_pred -HhhcCCCcccccccCCCCChHHHH
Q 010685 369 -FIDNGDFSVDGVLSDFPLTPSAAV 392 (504)
Q Consensus 369 -~i~~G~~gVDGIiTD~P~~~~~~l 392 (504)
++++| |||||||+|+++.+++
T Consensus 334 ~l~~~G---VDgIiTD~P~~~~~~l 355 (356)
T 1ydy_A 334 LYNKAG---VNGLFTDFPDKAVKFL 355 (356)
T ss_dssp HHTTSC---CSEEEESCHHHHHHHH
T ss_pred HHHHcC---CCEEEeCCHHHHHHhh
Confidence 55655 9999999999988775
No 2
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=100.00 E-value=5.6e-46 Score=367.30 Aligned_cols=241 Identities=20% Similarity=0.198 Sum_probs=192.2
Q ss_pred cccCCCCCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccc
Q 010685 84 WQTLTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYL 163 (504)
Q Consensus 84 ~~~~~~~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~ 163 (504)
|++..+..|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++.
T Consensus 2 ~~~~~~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~----------- 68 (252)
T 3qvq_A 2 MQSAYSFLPQVIAHRGSSGQAPENTLASLHLAGQQGIK--WVEIDVMLSGDGIPVIFHDDYLSRTTDGD----------- 68 (252)
T ss_dssp CSSGGGGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECCCSBSTTTSSCC-----------
T ss_pred CcccCCCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCcEEEECCCccccccCCC-----------
Confidence 66667778999999999999999999999999999999 99999999999999999999999999853
Q ss_pred cCCCCCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccchHHHHHH
Q 010685 164 VNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFV 241 (504)
Q Consensus 164 vdG~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~~~~~~v 241 (504)
| .|.|+||+||++++++.|+ .+.|.+ ++||||+|+|++++ +..++||||...... ..+++.+
T Consensus 69 --~------~v~~~t~~el~~l~~~~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~~~---~~~~~~v 132 (252)
T 3qvq_A 69 --G------LIYKTPLAELKQLDAGSWK---GQEYQQ--ETIPTLLEAIEVISQYGMGLNLELKPCEGLE---EETIAAS 132 (252)
T ss_dssp --S------BGGGSCHHHHTTSCSSTTT---CGGGTT--CCCCBHHHHHHHHHHTTCEEEEEECCCTTCH---HHHHHHH
T ss_pred --c------eeecCcHHHHhcCCCCCcc---CccCCC--CcCcCHHHHHHHHhccCcEEEEEecCCCCcc---HHHHHHH
Confidence 2 7999999999999998764 456666 79999999999985 578999999643211 2466778
Q ss_pred HHHHHhcCC----ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcccccCCcc
Q 010685 242 LSVSRSVVV----NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDY 316 (504)
Q Consensus 242 ~~~l~~~g~----~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~~~~~~ 316 (504)
.+++++++. .+++||++..|+.+++.. | ..++.+ +.... + ..+. ..++. -+.++.+.+.
T Consensus 133 ~~~l~~~~~~~~~vii~SF~~~~l~~~~~~~-p-~~~~~~-l~~~~---~---~~~~------~~~~~~~~~~i~~~~~- 196 (252)
T 3qvq_A 133 VEVLKQHWPQDLPLLFSSFNYFALVSAKALW-P-EIARGY-NVSAI---P---SAWQ------ERLEHLDCAGLHIHQS- 196 (252)
T ss_dssp HHHHHHHSCTTSCEEEEESCHHHHHHHHHHC-T-TSCEEE-ECSSC---C---TTHH------HHHHHHTCSEEEEEGG-
T ss_pred HHHHHHhCcccCCEEEEeCCHHHHHHHHHHC-C-CCcEEE-EEecC---c---hhHH------HHHHHcCCeEEecchh-
Confidence 888888754 489999999999999986 4 688886 32211 0 1111 11111 1333443322
Q ss_pred ccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHHH
Q 010685 317 IWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (504)
Q Consensus 317 i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~ 394 (504)
...+.+|+.+|++|++|++||+|+. +++.+++++| ||||+||+|+.+.++++.
T Consensus 197 ----------~~~~~~v~~~~~~G~~v~~WTvn~~------------~~~~~l~~~G---VdgIiTD~P~~~~~~l~~ 249 (252)
T 3qvq_A 197 ----------FFDVQQVSDIKAAGYKVLAFTINDE------------SLALKLYNQG---LDAVFSDYPQKIQSAIDS 249 (252)
T ss_dssp ----------GCCHHHHHHHHHTTCEEEEECCCCH------------HHHHHHHHTT---CCEEEESSHHHHHHHHHH
T ss_pred ----------hCCHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHcC---CCEEEeCCHHHHHHHHHH
Confidence 1247899999999999999999753 7899999876 999999999999998864
No 3
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=100.00 E-value=6.2e-46 Score=366.88 Aligned_cols=233 Identities=21% Similarity=0.203 Sum_probs=188.3
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010685 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
.|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++. |
T Consensus 11 ~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~-------------g---- 71 (252)
T 2pz0_A 11 KTLVIAHRGDSKNVPENTIAAFKRAMELGAD--GIELDVQLTKDGHLVVIHDETVDRTTNGE-------------G---- 71 (252)
T ss_dssp CCEEEEETTTTTTSCTTSHHHHHHHHHHTCS--EEEEEEEECTTCCEEECSSSBSTTTSSCC-------------S----
T ss_pred CceEEEcCCCCCCCCcchHHHHHHHHHcCCC--EEEEEEEEecCCeEEEEcCCcccccCCCC-------------c----
Confidence 6999999999999999999999999999999 99999999999999999999999999853 2
Q ss_pred CcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhccchHHHHHHHHHHHhc
Q 010685 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~ 248 (504)
.|.|+||+||++++++.|+ ++.|.+ ++||||+|+|+++++ ..++||||.+.... ..+++.++++++++
T Consensus 72 --~v~~~t~~eL~~l~~~~~~---~~~~~~--~~iPtL~evL~~~~~~~~~l~iEiK~~~~~~---~~~~~~v~~~l~~~ 141 (252)
T 2pz0_A 72 --FVKDFTLEEIKKLDAGIKF---GEKFAG--ERIPTLYEVFELIGDKDFLVNIEIKSGIVLY---PGIEEKLIKAIKEY 141 (252)
T ss_dssp --BGGGSCHHHHTTSCSSTTT---CGGGTT--CCCCBHHHHHHHHTTSCCEEEEEECCSSCCC---TTHHHHHHHHHHHT
T ss_pred --chhhCcHHHHhhcCCCCCC---CCCCCC--CcCCCHHHHHHHhhhcCCeEEEEeCCCCccc---HHHHHHHHHHHHhc
Confidence 7999999999999998764 445666 799999999999964 67999999764321 25788999999998
Q ss_pred CC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcccccCCccccccCccc
Q 010685 249 VV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESL 324 (504)
Q Consensus 249 g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~~~~~~i~~~~~~~ 324 (504)
++ .+|+||++..|+.+++.. | ..++++.+ .... . .+ ...++. .+.++.+.+..
T Consensus 142 ~~~~~vii~SF~~~~l~~~~~~~-p-~~~~~~l~-~~~~-~-----~~------~~~~~~~~~~~i~~~~~~-------- 198 (252)
T 2pz0_A 142 NFEERVIISSFNHYSLRDVKKMA-P-HLKIGLLY-QCGL-V-----EP------WHMALRMEAYSLHPFYFN-------- 198 (252)
T ss_dssp TCTTTEEEEESBHHHHHHHHHHC-T-TSEEEEEE-CSBC-S-----ST------HHHHHHTTCSEEEEBGGG--------
T ss_pred CCCCCEEEEeCCHHHHHHHHHHC-C-CCCEEEEe-cCcc-c-----cH------HHHHHHcCCeEEecchhc--------
Confidence 75 388999999999999986 4 67887633 2110 0 01 111222 13444443321
Q ss_pred cCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHH
Q 010685 325 YLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 325 ~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
..+.+|+.+|++|++|++||+|++ +++.+++++| ||||+||+|+.+.++++
T Consensus 199 ---~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---vdgIiTD~P~~~~~~l~ 249 (252)
T 2pz0_A 199 ---IIPELVEGCKKNGVKLFPWTVDRK------------EDMERMIKAG---VDGIITDDPETLINLVR 249 (252)
T ss_dssp ---CCHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHC
T ss_pred ---CCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHcC---CCEEEcCCHHHHHHHHh
Confidence 247899999999999999999753 7889999876 99999999999888774
No 4
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=100.00 E-value=5.6e-46 Score=373.95 Aligned_cols=250 Identities=19% Similarity=0.237 Sum_probs=197.2
Q ss_pred CCccc-cCCCCCcEEEEeCCCCCCCCchHHHHHHHH-HHcCCCCcEEEEeeEEecCCeEEEecCCcCccccccccccccc
Q 010685 81 TSRWQ-TLTGDPPFVVARGGFSGIFPDSSSIAYSLT-LITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQ 158 (504)
Q Consensus 81 ~~~~~-~~~~~~p~viaHRG~~~~~pEnT~~a~~~A-~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~ 158 (504)
.+.|. ++.+.+|+||||||+++.+||||++||+.| ++.|+| +||||||+||||++||+||.+|+|+|++.
T Consensus 12 ~~~~~~~~~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~------ 83 (287)
T 2oog_A 12 AIQWHTNLTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKAS--YIEIDLQRTKDGHLVAMHDETVNRTTNGH------ 83 (287)
T ss_dssp --CCCCCTTSCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCS--EEEEEEEECTTCCEEECSSSBSTTTSSCC------
T ss_pred cccccccCCCCcceEEecCCCCCCCCchhHHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCChhcccCCCC------
Confidence 44676 456788999999999999999999999999 699999 99999999999999999999999999853
Q ss_pred ccccccCCCCCCCcccccCCHHHHhcCcccCCccC-----CCCCCCCCCcccCCHHHHHHHhC-CCceEEeeccchhhhc
Q 010685 159 QKNYLVNGVPTPGWFSIDYTLNDLSNIILNQGVYS-----RTDKFDGNGFQILTVQDMARQIK-PPGLWLNIQHDAFYAQ 232 (504)
Q Consensus 159 ~~~~~vdG~~~~g~~v~d~Tl~EL~~l~~~~~~~~-----r~~~~~g~~~~IpTLeEvL~~~k-~~~l~iEIK~~~~~~~ 232 (504)
| .|.|+||+||++|+++.|+.. +...|.+ ++||||+|+|+.++ +.+++||||.+..+
T Consensus 84 -------g------~v~d~T~~eL~~l~~~~~f~~~~p~~~~~~~~~--~~iPtL~evL~~~~~~~~l~IEiK~~~~~-- 146 (287)
T 2oog_A 84 -------G------KVEDYTLDELKQLDAGSWFNKKYPKYARASYKN--AKVPTLDEILERYGPNANYYIETKSPDVY-- 146 (287)
T ss_dssp -------S------BGGGSCHHHHTTSCSSHHHHHHCGGGCCGGGTT--CCCCBHHHHHHHHCTTSCEEEECCCTTTS--
T ss_pred -------e------ehhhCcHHHHHhcCCCcccCccCccccccccCC--ccCCCHHHHHHhhCcCceEEEEECCCCCc--
Confidence 2 799999999999999876432 1224555 79999999999986 47899999986432
Q ss_pred cchHHHHHHHHHHHhcCC----------ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHH
Q 010685 233 HNLSMRSFVLSVSRSVVV----------NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTF 302 (504)
Q Consensus 233 ~~~~~~~~v~~~l~~~g~----------~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~ 302 (504)
..+++.++++++++++ .+|+||++..|+++++.. | ..++++.+ ....... ... ..+..
T Consensus 147 --~~~~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~-p-~~~~~~l~-~~~~~~~---~~~----~~~~~ 214 (287)
T 2oog_A 147 --PGMEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQN-K-HVPLVKLV-DKGELQQ---FND----QRLKE 214 (287)
T ss_dssp --TTHHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHC-T-TSCEEEEE-CTTTGGG---CCH----HHHHH
T ss_pred --chHHHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhC-C-CCcEEEEe-cCCcccc---cCH----HHHHH
Confidence 2477889999999876 488999999999999986 4 68888633 2211100 000 12345
Q ss_pred HHhhhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCccccccc
Q 010685 303 IKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLS 382 (504)
Q Consensus 303 i~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiT 382 (504)
+..++.++.+.+.. ..+.+|+.+|++|++|++||+|++ +++.+++++| ||||||
T Consensus 215 ~~~~~~~v~~~~~~-----------~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---VdgIiT 268 (287)
T 2oog_A 215 IRSYAIGLGPDYTD-----------LTEQNTHHLKDLGFIVHPYTVNEK------------ADMLRLNKYG---VDGVFT 268 (287)
T ss_dssp HHTTCSEEEEBGGG-----------CCHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEE
T ss_pred HhhhheEEcccHhh-----------cCHHHHHHHHHCCCeEEEEeCCCH------------HHHHHHHHcC---CCEEEe
Confidence 55566666654332 147899999999999999999754 7889999876 999999
Q ss_pred CCCCChHHHHH
Q 010685 383 DFPLTPSAAVD 393 (504)
Q Consensus 383 D~P~~~~~~l~ 393 (504)
|+|+.+.++++
T Consensus 269 D~P~~~~~~~~ 279 (287)
T 2oog_A 269 NFADKYKEVIK 279 (287)
T ss_dssp SCHHHHHHHHH
T ss_pred CCHHHHHHHHh
Confidence 99999888775
No 5
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=100.00 E-value=4.7e-45 Score=359.33 Aligned_cols=232 Identities=15% Similarity=0.133 Sum_probs=184.4
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010685 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
.|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++. |
T Consensus 6 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~R~t~~~-------------g---- 66 (247)
T 2otd_A 6 YPRIVAHRGGGKLAPENTLAAIDVGAKYGHK--MIEFDAKLSKDGEIFLLHDDNLERTSNGW-------------G---- 66 (247)
T ss_dssp CCSEEETTTTTTSSCSSSHHHHHHHHHTTCS--EEEEEEEECTTCCEEECSSSBSSTTSSCC-------------S----
T ss_pred CCeEEECCCCCCCCCchhHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCCccccCCCC-------------c----
Confidence 5889999999999999999999999999999 99999999999999999999999999853 2
Q ss_pred CcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccchHHHHHHHHHHHhc
Q 010685 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~ 248 (504)
.|.|+||+||++++++.|+ .+.|.+ ++||||+|+|++++ +..++||||.+.... ..+++.++++++++
T Consensus 67 --~v~~~t~~eL~~l~~g~~~---~~~~~~--~~iptL~evl~~~~~~~~~l~iEiK~~~~~~---~~~~~~v~~~l~~~ 136 (247)
T 2otd_A 67 --VAGELNWQDLLRVDAGSWY---SKAFKG--EPLPLLSQVAERCREHGMMANIEIKPTTGTG---PLTGKMVALAARQL 136 (247)
T ss_dssp --BGGGSCHHHHTTCCSSTTT---CGGGTT--CCCCBHHHHHHHHHHTTCEEEEEECCCTTCH---HHHHHHHHHHHHHH
T ss_pred --cHhhCcHHHHhhCCCCCcc---CCCCCC--CcCCCHHHHHHHHHhcCCEEEEEECCCCCcc---hHHHHHHHHHHHHH
Confidence 6999999999999998764 445666 79999999999985 477999999764322 24567788888765
Q ss_pred --C--CceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCcc
Q 010685 249 --V--VNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDES 323 (504)
Q Consensus 249 --g--~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~~ 323 (504)
+ ..+|+||++..|+.+++.. | ..++++.+ ... + ..+ ...++.. +.++.+.+..
T Consensus 137 ~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~---~---~~~------~~~~~~~~~~~i~~~~~~------- 194 (247)
T 2otd_A 137 WAGMTPPLLSSFEIDALEAAQQAA-P-ELPRGLLL-DEW---R---DDW------RELTARLGCVSIHLNHKL------- 194 (247)
T ss_dssp TTTSCCCEEEESCHHHHHHHHHHC-T-TSCEEEEE-SSC---C---TTH------HHHHHHHTCSEEEEEGGG-------
T ss_pred hcCcCCEEEEcCCHHHHHHHHHHC-C-CCCEEEEe-cCC---c---ccH------HHHHHHcCCeEEecChHh-------
Confidence 3 3589999999999999986 4 67887633 211 1 111 1112221 3444443221
Q ss_pred ccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHH
Q 010685 324 LYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAV 392 (504)
Q Consensus 324 ~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l 392 (504)
.++.+|+.+|++|++|++||+|++ +++.++++.| ||||+||+|+.+.+++
T Consensus 195 ----~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~~G---vdgI~TD~p~~~~~~l 244 (247)
T 2otd_A 195 ----LDKARVMQLKDAGLRILVYTVNKP------------QHAAELLRWG---VDCICTDAIDVIGPNF 244 (247)
T ss_dssp ----CCHHHHHHHHHTTCEEEEECCCCH------------HHHHHHHHHT---CSEEEESCTTTSCTTC
T ss_pred ----CCHHHHHHHHHCCCEEEEEccCCH------------HHHHHHHHcC---CCEEEeCCHHHHHHHH
Confidence 147899999999999999999753 7889999876 9999999999987655
No 6
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=100.00 E-value=4e-44 Score=364.75 Aligned_cols=261 Identities=16% Similarity=0.166 Sum_probs=191.6
Q ss_pred CCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCC
Q 010685 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (504)
Q Consensus 90 ~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~ 169 (504)
.++.||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|+... +|+.+
T Consensus 16 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lTkDg~~Vv~HD~~l~rtt~~~~-----------~G~~~ 82 (313)
T 3l12_A 16 SVVRVIGHRGARGVMPENTLEGFAFTLAAGVR--ALEFDVVMTADGVPVVTHNHHLANAMTRDG-----------QGHWL 82 (313)
T ss_dssp TBCEEEEETTTTTTSCTTCHHHHHHHHHTTCC--EEEEEEEECTTSCEEECSSSBCCTTTCBCT-----------TSCBC
T ss_pred CCeEEEEcCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCCEEEECCchhcccccccC-----------CCccc
Confidence 35889999999999999999999999999999 999999999999999999999999975321 23211
Q ss_pred --CCcccccCCHHHHhcCcccCCcc------CCC--CCCCCCCcccCCHHHHHHHhC-----CCceEEeeccchhhhcc-
Q 010685 170 --PGWFSIDYTLNDLSNIILNQGVY------SRT--DKFDGNGFQILTVQDMARQIK-----PPGLWLNIQHDAFYAQH- 233 (504)
Q Consensus 170 --~g~~v~d~Tl~EL~~l~~~~~~~------~r~--~~~~g~~~~IpTLeEvL~~~k-----~~~l~iEIK~~~~~~~~- 233 (504)
.++.|.|+||+||++|+++.+.. .++ ..+.| ++||||+|+|++++ +.+++||||.+......
T Consensus 83 ~~~~~~v~~~t~~eL~~l~~~~~~~~~~~~~~~~~~~~~~g--~~iptL~evl~~~~~~~~~~~~l~IEiK~~~~~~~~~ 160 (313)
T 3l12_A 83 TGAERQVAEMTYAEIRALDVGGLDGRTVYGRRFPDQAFLTG--IHVPRLGELLDLCAGYGDQAPYLLLELKSDPALMHDH 160 (313)
T ss_dssp CSSCCBGGGSCHHHHHTSBCSSCCTTSHHHHHSTTSCCCSS--CCCCBHHHHHHHHHTTGGGCCEEEEEECCCGGGTTCH
T ss_pred CCCCcchhcCcHHHHhhCCCCCccccccccccCccccccCC--CcCCCHHHHHHHHHhcCCCCceEEEEEccCCcccccc
Confidence 23689999999999999987321 011 12233 79999999999986 46799999986543211
Q ss_pred --chHHHHHHHHHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCc-cCC------C-ccccHHHHHhhH
Q 010685 234 --NLSMRSFVLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSE-IEP------T-TNQTYGSLLKNL 300 (504)
Q Consensus 234 --~~~~~~~v~~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~-~~~------~-~~~~y~~l~~~l 300 (504)
...+++.++++++++++ .+|+||++..|+++++.. | +.++++.. .... ... . ....|..+...+
T Consensus 161 ~~~~~~~~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~-p-~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l 237 (313)
T 3l12_A 161 AARAEMVAAVLADVRRYRMEPRTVMHSFDWALLGECRRQA-P-DLPTSYLS-QLPENADDPGEDSAKPVGPDYDRMTESL 237 (313)
T ss_dssp HHHHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC-T-TSCEEEEE-CCCC-------------CCCTTTCCSCH
T ss_pred ccHHHHHHHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHC-C-CCcEEEEe-ccccccccccccccccccccchhccccH
Confidence 13678999999999886 389999999999999986 4 78888733 2211 000 0 000000000001
Q ss_pred -HHHHhh-hcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCccc
Q 010685 301 -TFIKTF-ASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVD 378 (504)
Q Consensus 301 -~~i~~~-a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVD 378 (504)
..++.. +.++++.+. ...+.+|+.+|++|++|++||||++ +++.+++++| ||
T Consensus 238 ~~~~~~~~~~~~~~~~~-----------~~~~~~v~~~~~~Gl~V~~WTVn~~------------~~~~~l~~~G---VD 291 (313)
T 3l12_A 238 PQAVASAGGQLWCPYFL-----------DVTPELVAEAHDLGLIVLTWTVNEP------------EDIRRMATTG---VD 291 (313)
T ss_dssp HHHHHHHTCSEEEEBGG-----------GCCHHHHHHHHHTTCEEEEBCCCSH------------HHHHHHHHHT---CS
T ss_pred HHHHHHhCCcEEecchh-----------cCCHHHHHHHHHCCCEEEEEcCCCH------------HHHHHHHHcC---CC
Confidence 111211 344444322 1257899999999999999999854 7899999876 99
Q ss_pred ccccCCCCChHHHHHH
Q 010685 379 GVLSDFPLTPSAAVDC 394 (504)
Q Consensus 379 GIiTD~P~~~~~~l~~ 394 (504)
|||||+|+.+.++++.
T Consensus 292 gIiTD~P~~~~~~l~~ 307 (313)
T 3l12_A 292 GIVTDYPGRTQRILID 307 (313)
T ss_dssp EEEESCHHHHHHHHHH
T ss_pred EEEeCCHHHHHHHHHh
Confidence 9999999999998864
No 7
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=100.00 E-value=1.6e-44 Score=356.52 Aligned_cols=240 Identities=14% Similarity=0.059 Sum_probs=187.1
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCC
Q 010685 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTP 170 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~ 170 (504)
.|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++. |
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~-------------g---- 62 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALE--EVEFDLHPTADGAIVVHHDPTLDATTDMT-------------G---- 62 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSS--EEEEEEEECTTSCEEECSSSBSTTTBSCC-------------S----
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEEEeEccCCCEEEECCCccccccCCC-------------C----
Confidence 4899999999999999999999999999999 99999999999999999999999999853 2
Q ss_pred CcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC--CCceEEeeccchhhhccchHHHHHHHHHHHhc
Q 010685 171 GWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK--PPGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (504)
Q Consensus 171 g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k--~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~ 248 (504)
.+.|+||+||++++++.+ . +++||||+|+|++++ +..++||||.+.... ....+++.++++++++
T Consensus 63 --~v~~~t~~el~~l~~~~~--------~--~~~iptL~evl~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~v~~~l~~~ 129 (250)
T 3ks6_A 63 --AIVDMTLAKVKTATIRYG--------A--GSHPMTLEELCALYVDSHVNFRCEIKPGVDGL-PYEGFVALVIAGLERH 129 (250)
T ss_dssp --BGGGSCHHHHHHCCBTTS--------T--TCCCEEHHHHHHHHTTCSCEEEEEECCCTTSC-CCTTHHHHHHHHHHHT
T ss_pred --eeecCcHHHHhcCCCCCC--------C--CccCcCHHHHHHHHhccCcEEEEEeCCCcccC-cchHHHHHHHHHHHhc
Confidence 799999999999999864 2 379999999999996 478999999753211 1236788999999999
Q ss_pred CC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCcccc
Q 010685 249 VV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLY 325 (504)
Q Consensus 249 g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~ 325 (504)
++ .+++||++..|+.+++.. | ..++.+ +.. . ..... .+..+..++...+++ .+.+. +
T Consensus 130 ~~~~~v~~~SF~~~~l~~~~~~~-p-~~~~~l-~~~-~------~~~~~----~~~~~~~~~~~~~~~--~~~~~----~ 189 (250)
T 3ks6_A 130 SMLERTTFSSFLLASMDELWKAT-T-RPRLWL-VSP-S------VLQQL----GPGAVIETAIAHSIH--EIGVH----I 189 (250)
T ss_dssp TCGGGEEEEESCHHHHHHHHHHC-C-SCEEEE-ECH-H------HHHHH----HHHHHHHHHHHTTCC--EEEEE----G
T ss_pred CCCCCEEEEeCCHHHHHHHHHHC-C-CCcEEE-Eec-c------ccccc----chhHHHHHHHhcCCC--EEecc----h
Confidence 86 389999999999999986 4 567653 211 0 00000 122222222222221 11111 1
Q ss_pred CCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHHHhhh
Q 010685 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAH 397 (504)
Q Consensus 326 l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~ 397 (504)
....+.+|+.+|++|++|++||+|+. +++.+++++| ||||+||+|+.+.++++.+..
T Consensus 190 ~~~~~~~v~~~~~~G~~V~~WTvn~~------------~~~~~l~~~G---VDgIiTD~P~~~~~~~~~~~~ 246 (250)
T 3ks6_A 190 DTADAGLMAQVQAAGLDFGCWAAHTP------------SQITKALDLG---VKVFTTDRPTLAIALRTEHRM 246 (250)
T ss_dssp GGCCHHHHHHHHHTTCEEEEECCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHHHHHH
T ss_pred hhCCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHHcC---CCEEEcCCHHHHHHHHHHhhc
Confidence 12357899999999999999999754 7899999876 999999999999999987654
No 8
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=100.00 E-value=1.2e-43 Score=353.74 Aligned_cols=245 Identities=15% Similarity=0.163 Sum_probs=183.5
Q ss_pred CcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCccc----ccccccccccccccccCC
Q 010685 91 PPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNA----SNIAQIFKTQQKNYLVNG 166 (504)
Q Consensus 91 ~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rt----T~~~~~~~~~~~~~~vdG 166 (504)
.++||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+ |++...++
T Consensus 8 ~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~---------- 75 (272)
T 3ch0_A 8 SFDIQGHRGCRGLLPENTIAAFTKALLLGVT--TLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTE---------- 75 (272)
T ss_dssp TCEEEETTTTTTTSSTTSHHHHHHHHHHTCS--EEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCT----------
T ss_pred cccEEecCCCCCCCCcccHHHHHHHHHcCCC--EEEEeeeEcCCCcEEEeCCCcccccccccCCCccccc----------
Confidence 5789999999999999999999999999999 9999999999999999999999993 44321111
Q ss_pred CCCCCcccccCCHHHHhcCcccCCccCCCCCCCCC---CcccCCHHHHHHHhC----CCceEEeeccchhhh----ccch
Q 010685 167 VPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGN---GFQILTVQDMARQIK----PPGLWLNIQHDAFYA----QHNL 235 (504)
Q Consensus 167 ~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~---~~~IpTLeEvL~~~k----~~~l~iEIK~~~~~~----~~~~ 235 (504)
.+..++.|.|+||+||++++++.|+ .+.|.+. ..+||||+|+|++++ +..++||||.+.... ....
T Consensus 76 ~~~~~~~v~d~t~~eL~~l~~~~~~---~~~~~~~~~~~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~ 152 (272)
T 3ch0_A 76 ANEKNFNLYAMNYADIKEIDVGMKT---HPRFKSQKKVPAVKPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNIA 152 (272)
T ss_dssp TTGGGSBGGGSCHHHHTTSCCSSSC---CTTCTTSCCCCCCCCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCHH
T ss_pred ccccCceeecCCHHHHHhcCCCCcc---CccCcccccCCCCCcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccHH
Confidence 1123468999999999999999875 3345441 138999999999985 478999999865421 1123
Q ss_pred HHHHHHHHHHHhcCCc---eEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhccccc
Q 010685 236 SMRSFVLSVSRSVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILV 312 (504)
Q Consensus 236 ~~~~~v~~~l~~~g~~---~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~ 312 (504)
.+++.++++++++++. +|+||++..|+.+++.. | ..++++.. ... ..+..+ +..+...+.++++
T Consensus 153 ~~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~-------~~~~~~---~~~~~~~~~~i~~ 219 (272)
T 3ch0_A 153 LFCDLVVAEIKKAHITDRFTLQSFDVRALEYMHSQY-P-DIKLSYLV-ETK-------GTLKKQ---LEKLSFTPAVYSP 219 (272)
T ss_dssp HHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHC-T-TSEEEEEE-CSS-------CCHHHH---HTTSSSCCSEEEE
T ss_pred HHHHHHHHHHHHcCCCCcEEEEeCCHHHHHHHHHHC-C-CCcEEEEe-cCC-------CCHHHH---HHHcCCCCcEEcc
Confidence 5788999999998763 88999999999999986 4 67888633 211 011110 0000000122332
Q ss_pred CCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChH
Q 010685 313 PKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPS 389 (504)
Q Consensus 313 ~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~ 389 (504)
.+. ...+.+|+.+|++|++|++||+|++ +++.+++++| |||||||+|+.+.
T Consensus 220 ~~~-----------~~~~~~v~~~~~~Gl~v~~wTvn~~------------~~~~~l~~~G---vdgIiTD~P~~~~ 270 (272)
T 3ch0_A 220 DVT-----------LVSKKDIDAAHKLGMRVIPWTVNTK------------EEIETLISLG---VDGIITDYPDLFF 270 (272)
T ss_dssp BGG-----------GCCHHHHHHHHHTTCEECCBCCCSH------------HHHHHHHHHT---CSEEEESCGGGGT
T ss_pred chh-----------hcCHHHHHHHHHcCCEEEEeccCCH------------HHHHHHHHcC---CCEEEeCCHHHHh
Confidence 211 1257899999999999999999753 6889999876 9999999999864
No 9
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=100.00 E-value=1.8e-43 Score=350.22 Aligned_cols=236 Identities=16% Similarity=0.176 Sum_probs=184.5
Q ss_pred CCcEEEEeCCCC--CCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCC---cCccccccccccccccccccc
Q 010685 90 DPPFVVARGGFS--GIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDL---KLDNASNIAQIFKTQQKNYLV 164 (504)
Q Consensus 90 ~~p~viaHRG~~--~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~---~l~rtT~~~~~~~~~~~~~~v 164 (504)
..|+||||||++ +.+||||++||+.|++.|+| +||||||+||||++||+||. +|+|+|++.
T Consensus 5 ~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~------------ 70 (258)
T 2o55_A 5 IIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIP--YIETDLRVCKTGEIVLFHGTPEGTIPFYKDGT------------ 70 (258)
T ss_dssp CCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCC--EEEEEEEECTTSCEEECCCSTTSBCTTSTTTT------------
T ss_pred cCceEEECCCCCCCCCCCccHHHHHHHHHHcCcC--EEEEEEEEecCCeEEEEeCCCCccceeeCCCC------------
Confidence 569999999999 99999999999999999999 99999999999999999999 999999842
Q ss_pred CCCCCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC----CCceEEeeccchhhhccchHHHHH
Q 010685 165 NGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK----PPGLWLNIQHDAFYAQHNLSMRSF 240 (504)
Q Consensus 165 dG~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k----~~~l~iEIK~~~~~~~~~~~~~~~ 240 (504)
+.|.|+||+||++++++. +++||||+|+|++++ +..++||||.+.... ....+++.
T Consensus 71 -------g~v~~~t~~eL~~l~~~~------------~~~iptL~evl~~~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~ 130 (258)
T 2o55_A 71 -------SRIGDLSLEELKRLDVGG------------GHTIPSLEELFVAIEEQKFNLKLNLELKGEEWKR-KESGDHQR 130 (258)
T ss_dssp -------CBGGGSCHHHHTTCBSSS------------SCBCCBHHHHHHHHHHSCSCCEEEEEECCSSSSS-TTSSHHHH
T ss_pred -------eehhhCcHHHHhhcCCCC------------CCccCCHHHHHHHhhhhcCceEEEEEEccCCccc-cchHHHHH
Confidence 279999999999998762 379999999999986 467999999754211 11357889
Q ss_pred HHHHHHhcCCc---eEecCCHHHHHHHHHhcCCCCCcEEEEec-cCCccCCCccccHHHHHhhHHHHHh-hhcccccCCc
Q 010685 241 VLSVSRSVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRFL-GKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKD 315 (504)
Q Consensus 241 v~~~l~~~g~~---~isSfd~~~L~~l~~~~~~~~~~lv~~ll-~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~~~~~ 315 (504)
++++++++++. +|+||++..|+.+++.. | ..++++ +. ......+ ..+ +..++. .+.++++.+.
T Consensus 131 v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~-l~~~~~~~~~---~~~------~~~~~~~~~~~v~~~~~ 198 (258)
T 2o55_A 131 LLLLVEKYHMQERVDYCSFHHEALAHLKALC-P-DVKITY-LFNYMGQPTP---LDF------VEQACYGDANGVSMLFH 198 (258)
T ss_dssp HHHHHHTTTCGGGEEEEESSHHHHHHHHHHC-T-TCEEEE-ECCTTSCCCC---TTH------HHHHHHTTCSEEEEEGG
T ss_pred HHHHHHHcCCCCCEEEEeCCHHHHHHHHHHC-C-CCcEEE-EEeCCCCCCH---HHH------HHHHHhcCCeEEecChh
Confidence 99999998863 88999999999999986 4 677876 33 2111111 111 111221 2344444322
Q ss_pred cccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHH
Q 010685 316 YIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 316 ~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
. ..+.+|+.+|++|++|++||+++. .|..+++.+++++| ||||+||+|+.+.++++
T Consensus 199 ~-----------~~~~~v~~~~~~G~~v~~wTv~~~--------~n~~~~~~~l~~~G---vdgI~TD~p~~~~~~l~ 254 (258)
T 2o55_A 199 Y-----------LTKEQVCTAHEKGLSVTVWMPWIF--------DDSEEDWKKCLELQ---VDLICSNYPFGLMNFLS 254 (258)
T ss_dssp G-----------CCHHHHHHHHHTTCEEEEECCTTC--------CCCHHHHHHHHHHT---CSEEEESCHHHHHHHHT
T ss_pred h-----------cCHHHHHHHHHCCCEEEEeeCCCC--------CCCHHHHHHHHHcC---CCEEEeCCHHHHHHHHH
Confidence 1 247899999999999999999321 03347899999876 99999999999988875
No 10
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=100.00 E-value=1e-42 Score=351.03 Aligned_cols=253 Identities=19% Similarity=0.198 Sum_probs=190.0
Q ss_pred ccccCCCCCcEEEEeCCCCC-CCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccc
Q 010685 83 RWQTLTGDPPFVVARGGFSG-IFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKN 161 (504)
Q Consensus 83 ~~~~~~~~~p~viaHRG~~~-~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~ 161 (504)
.|...++.+|+||||||+++ .+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++.
T Consensus 23 ~~~~~~~~~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d--~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~~--------- 91 (292)
T 3mz2_A 23 FYQYADDRIPLISGHRGGRGKGYPENSMETFENTLSYTPA--TFEIDPRLTKDSVIVLFHDDTLERTSNGT--------- 91 (292)
T ss_dssp HTBCCTTCCCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCC--EEEECEEECTTCCEEECCSSSSTTTBSCC---------
T ss_pred HHhCCCCCCCEEEECCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEeECCCCcEEEECCchhcccCCCC---------
Confidence 45566778899999999986 7999999999999999999 99999999999999999999999999853
Q ss_pred cccCCCCCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC-CceEEeeccchhhhccchHHHHH
Q 010685 162 YLVNGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSF 240 (504)
Q Consensus 162 ~~vdG~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~~~~~~~~ 240 (504)
| .|.|+||+||++++++.+. ..|.+ ++||||+|+|+++++ ..++||+|... .+.
T Consensus 92 ----g------~v~~~t~~el~~l~~~~~~----~~~~~--~~iptL~evl~~~~~~~~l~iE~K~~~---------~~~ 146 (292)
T 3mz2_A 92 ----G------KVSDYTWEELQNFRLKDPE----GNITN--YRIPTLEEAIRWARGKTILILDKKDVP---------MER 146 (292)
T ss_dssp ----S------CGGGSCHHHHTTSCBBCTT----CCBCS--CCCCBHHHHHHHHTTTCCEEECCSSSC---------HHH
T ss_pred ----C------chhhCcHHHHhcCCCCCCC----CccCC--cCCCCHHHHHHHhCCCcEEEEEECCCc---------HHH
Confidence 2 7999999999999998642 23444 799999999999874 67999999742 257
Q ss_pred HHHHHHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccc
Q 010685 241 VLSVSRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYI 317 (504)
Q Consensus 241 v~~~l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i 317 (504)
++++++++++ ++++||+++.|+++++.. | ..++++.+ . . .. .+..+.. .+ .++...
T Consensus 147 v~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~-p-~~~~~~l~-~-~------~~-------~l~~~~~--~g--~~~~~~ 205 (292)
T 3mz2_A 147 TAQLITDMQAEPYVMITVHDGASARFFYEKN-P-NFMFEAFV-K-T------KE-------AVQDYED--NG--IPWSHI 205 (292)
T ss_dssp HHHHHHHTTCTTTEEEEESSHHHHHHHHHHC-T-TCCEEEEC-C-S------HH-------HHHHHHH--TT--CCGGGE
T ss_pred HHHHHHHcCCCCCEEEEECCHHHHHHHHHHC-C-CCeEEEEe-C-C------HH-------HHHHHHH--hC--CChhhe
Confidence 8889998876 489999999999999986 4 67777632 1 1 01 1222211 11 111110
Q ss_pred cccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHHHhhh
Q 010685 318 WPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAH 397 (504)
Q Consensus 318 ~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~ 397 (504)
...-...+....+++|+.+|++|++|++||+++..... -..|+.++|.+++++| ||||+||+|+.+.++++.+++
T Consensus 206 ~~~~~~~~~~~~~~~V~~ah~~G~~V~vWTv~t~d~~~--~~~~~~~~~~~L~~~G---VDgIiTD~P~~l~~~L~~~~~ 280 (292)
T 3mz2_A 206 MAYVGPKITPEVREVIDMLHERGVMCMISTAPSDDKLS--TPESRAEAYRMIIRQG---VDIIESDRPIEVAEAISSLIP 280 (292)
T ss_dssp EEEEESSCCHHHHHHHHHHHHTTBCEEEECTTTGGGSS--SHHHHHHHHHHHHHTT---CCEEEESCHHHHHHHHGGGSC
T ss_pred eeeecccccccCHHHHHHHHHCCCEEEEEeCCCcchhh--hccccHHHHHHHHHcC---CCEEEeCCHHHHHHHHHHhcc
Confidence 00000001112468999999999999999998631000 0013457899999876 999999999999999987653
No 11
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=100.00 E-value=3.3e-44 Score=353.78 Aligned_cols=229 Identities=15% Similarity=0.074 Sum_probs=183.2
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCCCC
Q 010685 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPTPG 171 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~~g 171 (504)
|+||||||+++.+||||++||+.|++.|+| +||+|||+||||++||+||.+|+|+|++. |
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDg~lVv~HD~~l~Rtt~~~-------------g----- 61 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGAD--YIELDVRESADGVLYVIHDETLDRTTNGT-------------G----- 61 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCS--EEEEEEEECTTCCEEECSSSBTTTTSSCC-------------S-----
T ss_pred CeEEECCCCCCCCCchHHHHHHHHHHcCCC--EEEEEeeEcCCCCEEEECCCccccccCCC-------------c-----
Confidence 789999999999999999999999999999 99999999999999999999999999853 2
Q ss_pred cccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC--CceEEeeccchhhhccchHHHHHHHHHHHhcC
Q 010685 172 WFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVV 249 (504)
Q Consensus 172 ~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g 249 (504)
.|.|+||+||++++++.+ ++||||+|+|+++++ ..++||||.+.... . .+++.+++++++++
T Consensus 62 -~v~~~t~~eL~~l~~g~~------------~~iptL~evl~~~~~~~~~l~iEiK~~~~~~-~--~~~~~v~~~l~~~~ 125 (248)
T 1zcc_A 62 -PVGHMLSSEIDTLDAGGW------------FDDRFKGAIVPRLDAYLEHLRGRAGVYIELK-Y--CDPAKVAALVRHLG 125 (248)
T ss_dssp -BSTTSCHHHHTTSCSSTT------------TCGGGTTCCCCBHHHHHHHHTTTCEEEEEEE-E--SCHHHHHHHHHHHT
T ss_pred -chhhCCHHHHHhCCCCCC------------CCCCCHHHHHHHHHhcCcEEEEEeCCCCCcc-c--HHHHHHHHHHHHhC
Confidence 699999999999988753 599999999998864 67899999754211 1 26788999999887
Q ss_pred C---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcccccCCccccccCcccc
Q 010685 250 V---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLY 325 (504)
Q Consensus 250 ~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~~~~~~i~~~~~~~~ 325 (504)
+ .+|+||++..|+.+++.. | ..++++.+ ... .. . ...++. .+.++.+.+..+
T Consensus 126 ~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~--~~-----~------~~~~~~~~~~~i~~~~~~~-------- 181 (248)
T 1zcc_A 126 MVRDTFYFSFSEEMRQGLQSIA-P-EFRRMMTL-DIA--KS-----P------SLVGAVHHASIIEITPAQM-------- 181 (248)
T ss_dssp CSTTEEEECSCHHHHHHHHHHC-T-TSEEEEEH-HHH--SS-----T------HHHHHTTCCSEEEECHHHH--------
T ss_pred CCCCEEEEECCHHHHHHHHHHC-C-CCcEEEEe-cCC--cc-----H------HHHHHHcCCCEEEecHHHh--------
Confidence 5 489999999999999986 4 67777632 211 00 0 122222 244455543322
Q ss_pred CCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHH-HhhcCCCcccccccCCCCChHHHHHHhhh
Q 010685 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLS-FIDNGDFSVDGVLSDFPLTPSAAVDCFAH 397 (504)
Q Consensus 326 l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~-~i~~G~~gVDGIiTD~P~~~~~~l~~~~~ 397 (504)
..+.+|+.+|++|++|++||+|++ +++.+ ++++| ||||+||+|+.+.++++....
T Consensus 182 --~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~~l~~~G---vdgIiTD~p~~~~~~~~~~~~ 237 (248)
T 1zcc_A 182 --RRPGIIEASRKAGLEIMVYYGGDD------------MAVHREIATSD---VDYINLDRPDLFAAVRSGMAE 237 (248)
T ss_dssp --HSHHHHHHHHHHTCEEEEECCCCC------------HHHHHHHHHSS---CSEEEESCHHHHHHHHHHHHH
T ss_pred --CCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHHcC---CCEEEECCHHHHHHHHHHhcc
Confidence 136799999999999999999865 67888 88776 999999999999999876543
No 12
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=100.00 E-value=1.3e-42 Score=340.58 Aligned_cols=224 Identities=16% Similarity=0.181 Sum_probs=178.4
Q ss_pred CCcEEEEeCCC--CCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCC
Q 010685 90 DPPFVVARGGF--SGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGV 167 (504)
Q Consensus 90 ~~p~viaHRG~--~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~ 167 (504)
.+|+||||||+ ++.+||||++||+.|++.|+| +||||||+||||++||+||.+++| .
T Consensus 3 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d--~iE~DV~lT~Dg~~Vv~HD~~l~~--~----------------- 61 (238)
T 3no3_A 3 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAY--GSEFDVHLTADNVLVVYHDNDIQG--K----------------- 61 (238)
T ss_dssp CCCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSEETT--E-----------------
T ss_pred CCCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCC--EEEEEeeEccCCcEEEECCCCCCC--C-----------------
Confidence 46999999999 689999999999999999999 999999999999999999999986 1
Q ss_pred CCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC---CCceEEeeccchhhhccchHHHHHHHHH
Q 010685 168 PTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK---PPGLWLNIQHDAFYAQHNLSMRSFVLSV 244 (504)
Q Consensus 168 ~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k---~~~l~iEIK~~~~~~~~~~~~~~~v~~~ 244 (504)
.+.|+||+||++++++. +++||||+|+|++++ +..++||||.+.... ....+++.++++
T Consensus 62 -----~v~~~t~~el~~l~~~~------------~~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~-~~~~~~~~v~~~ 123 (238)
T 3no3_A 62 -----HIQSCTYDELKDLQLSN------------GEKLPTLEQYLKRAKKLKNIRLIFELKSHDTPE-RNRDAARLSVQM 123 (238)
T ss_dssp -----EGGGSCHHHHTTCBCTT------------SCBCCBHHHHHHHHHHCTTCEEEEEECCCSSHH-HHHHHHHHHHHH
T ss_pred -----ChHhCCHHHHhhCCCCC------------CCcCCcHHHHHHHHhhcCCceEEEEeCCCCCcc-hhHHHHHHHHHH
Confidence 58899999999998763 379999999999985 368999999765321 123678899999
Q ss_pred HHhcCC---ceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhh-hcccccCCcccccc
Q 010685 245 SRSVVV---NYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPV 320 (504)
Q Consensus 245 l~~~g~---~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~ 320 (504)
++++++ .+++||++..|+++++.. | ..++.+ +.. . .. ...++.. +.++.+....+
T Consensus 124 l~~~~~~~~v~~~Sf~~~~l~~~~~~~-p-~~~~~~-l~~-~-~~-------------~~~~~~~~~~~~~~~~~~~--- 182 (238)
T 3no3_A 124 VKRMKLAKRTDYISFNMDACKEFIRLC-P-KSEVSY-LNG-E-LS-------------PMELKELGFTGLDYHYKVL--- 182 (238)
T ss_dssp HHHTTCGGGEEEEESCHHHHHHHHHHC-T-TSCEEE-CSS-C-SC-------------HHHHHHTTCCEEEEEHHHH---
T ss_pred HHHcCCcCCEEEEECCHHHHHHHHHHC-C-CCeEEE-EeC-C-CC-------------HHHHHHCCCceEeccHHhh---
Confidence 999986 388999999999999986 4 678886 322 1 11 1112221 33333322211
Q ss_pred CccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHHH
Q 010685 321 DESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDC 394 (504)
Q Consensus 321 ~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~ 394 (504)
...+.+|+.+|++|++|++||+|+. +++.+++++| ||||+||+|+.+.++++.
T Consensus 183 ------~~~~~~v~~~~~~G~~v~~WTVn~~------------~~~~~l~~~G---VdgIiTD~P~~~~~~l~~ 235 (238)
T 3no3_A 183 ------QSHPDWVKDCKVLGMTSNVWTVDDP------------KLMEEMIDMG---VDFITTDLPEETQKILHS 235 (238)
T ss_dssp ------HHSTTHHHHHHHTTCEEEEECCCSH------------HHHHHHHHHT---CSEEEESCHHHHHHHHHH
T ss_pred ------hCCHHHHHHHHHCCCEEEEECCCCH------------HHHHHHHHcC---CCEEECCCHHHHHHHHHh
Confidence 1135699999999999999999754 7899999876 999999999999988864
No 13
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=100.00 E-value=9.9e-42 Score=333.42 Aligned_cols=221 Identities=17% Similarity=0.184 Sum_probs=171.1
Q ss_pred CCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCCC
Q 010685 90 DPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVPT 169 (504)
Q Consensus 90 ~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~~ 169 (504)
...+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++.
T Consensus 11 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad--~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~----------------- 71 (234)
T 1o1z_A 11 HHVIVLGHRGYSAKYLENTLEAFMKAIEAGAN--GVELDVRLSKDGKVVVSHDEDLKRLFGLD----------------- 71 (234)
T ss_dssp CCCEEEEETTTTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSEEHHHHCEE-----------------
T ss_pred ceEEEEEcCCCCCCCCCchHHHHHHHHHcCCC--EEEEEeeEecCCCEEEEcCCcHHhcCCcC-----------------
Confidence 46899999999999999999999999999999 99999999999999999999999999853
Q ss_pred CCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCC-CceEEeeccchhhhccchHHHHHHHHHHHhc
Q 010685 170 PGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKP-PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSV 248 (504)
Q Consensus 170 ~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~-~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~ 248 (504)
+.|.|+||+||++++ + ++||||+|+|+++++ ..++||||.+. +++.+++++++.
T Consensus 72 --g~v~d~T~~eL~~l~-------------~--~~iptL~evL~~~~~~~~l~iEiK~~~--------~~~~v~~~l~~~ 126 (234)
T 1o1z_A 72 --VKIRDATVSELKELT-------------D--GKITTLKEVFENVSDDKIINIEIKERE--------AADAVLEISKKR 126 (234)
T ss_dssp --EEGGGSCHHHHHHHT-------------T--TCCCBHHHHHHHSCTTSEEEEEECCGG--------GHHHHHHHHTTC
T ss_pred --cCcccCcHHHHhcCC-------------C--CCCCCHHHHHHhcccCCeEEEEeCCcc--------HHHHHHHHHhcc
Confidence 279999999999986 2 599999999999976 78999999752 456788888874
Q ss_pred CCceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHH-hhhcccccCCccccccCccccCC
Q 010685 249 VVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIK-TFASGILVPKDYIWPVDESLYLL 327 (504)
Q Consensus 249 g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~-~~a~gi~~~~~~i~~~~~~~~l~ 327 (504)
+..+++||+ |+.+++.. | +.++.+ +...... . .+..+ +..+. ....++.+++..+. +.
T Consensus 127 ~~vii~Sf~---l~~~~~~~-p-~~~~~~-l~~~~~~--~---~~~~~---~~~~~~~~~~~i~~~~~~~g-------~~ 185 (234)
T 1o1z_A 127 KNLIFSSFD---LDLLDEKF-K-GTKYGY-LIDEENY--G---SIENF---VERVEKERPYSLHVPYQAFE-------LE 185 (234)
T ss_dssp CSEEEEESC---HHHHHHHC-T-TSCEEE-ECCTTTT--C---SHHHH---HHHHHHHCCSEEEEEGGGGG-------SH
T ss_pred CCEEEEchh---HHHHHhhC-C-CCcEEE-Eeccccc--c---CHHHH---HHHcCCCCCCEEEeCHHHhc-------CC
Confidence 456899999 88898886 4 678876 3221110 0 11111 11111 11255555443320 00
Q ss_pred CCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHH
Q 010685 328 PHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (504)
Q Consensus 328 ~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~ 391 (504)
..+.+|+.+|++|++|++||+|++ +++.++++ + ||||+||+|+.++++
T Consensus 186 ~~~~~v~~~~~~G~~v~~wTvn~~------------~~~~~l~~---~-vdgIiTD~P~~~~~~ 233 (234)
T 1o1z_A 186 YAVEVLRSFRKKGIVIFVWTLNDP------------EIYRKIRR---E-IDGVITDEVELFVKL 233 (234)
T ss_dssp HHHHHHHHHHHTTCEEEEESCCCH------------HHHHHHGG---G-CSEEEESCHHHHHHT
T ss_pred ccHHHHHHHHHcCCEEEEeCCCCH------------HHHHHHHH---h-CCEEEcCCHHHHhhc
Confidence 016799999999999999999754 67888884 6 999999999987764
No 14
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=100.00 E-value=8e-42 Score=331.74 Aligned_cols=215 Identities=15% Similarity=0.072 Sum_probs=168.9
Q ss_pred CCCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCCCC
Q 010685 89 GDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNGVP 168 (504)
Q Consensus 89 ~~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG~~ 168 (504)
..+|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+ + |
T Consensus 5 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d--~iE~DV~lT~Dg~lVv~HD~~l~--~----------------g-- 62 (224)
T 1vd6_A 5 RQRPLRLGHRGAPLKAKENTLESFRLALEAGLD--GVELDVWPTRDGVFAVRHDPDTP--L----------------G-- 62 (224)
T ss_dssp --CCEEEEETSCTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSCSEET--T----------------E--
T ss_pred CCCceEEECCCCCCCCCcchHHHHHHHHHcCCC--EEEEEeeEecCCcEEEECCCccC--C----------------C--
Confidence 356899999999999999999999999999999 99999999999999999999997 1 1
Q ss_pred CCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhC---CCceEEeeccchhhhccchHHHHHHHHHH
Q 010685 169 TPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIK---PPGLWLNIQHDAFYAQHNLSMRSFVLSVS 245 (504)
Q Consensus 169 ~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k---~~~l~iEIK~~~~~~~~~~~~~~~v~~~l 245 (504)
.|.|+||+||++++ ++||||+|+|++++ +..++||||.+.... ..+++.+++++
T Consensus 63 ----~v~~~t~~eL~~l~----------------~~iptL~evl~~~~~~~~~~l~iEiK~~~~~~---~~~~~~v~~~l 119 (224)
T 1vd6_A 63 ----PVFQVDYADLKAQE----------------PDLPRLEEVLALKEAFPQAVFNVELKSFPGLG---EEAARRLAALL 119 (224)
T ss_dssp ----EGGGSCHHHHHHHS----------------TTCCBHHHHHGGGGTCTTCEEEEEECCCTTSH---HHHHHHHHHHT
T ss_pred ----ChhhCCHHHHHhcC----------------CCCCCHHHHHHhhhccCCceEEEEECCCCCcc---HHHHHHHHHHH
Confidence 58999999999885 38999999999987 367999999754321 24677888888
Q ss_pred HhcCCceEecCCHHHHHHHHHhcCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCcccc
Q 010685 246 RSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLY 325 (504)
Q Consensus 246 ~~~g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~ 325 (504)
++.+..+++||++..|+.+++.. | ..++.+.+ ... + . .. +.. ..+.++++.+..
T Consensus 120 ~~~~~v~i~Sf~~~~l~~~~~~~-p-~~~~~~l~-~~~---~---~---~~---~~~--~~~~~i~~~~~~--------- 173 (224)
T 1vd6_A 120 RGREGVWVSSFDPLALLALRKAA-P-GLPLGFLM-AED---H---S---AL---LPC--LGVEAVHPHHAL--------- 173 (224)
T ss_dssp TTCSSEEEEESCHHHHHHHHHHC-T-TSCEEEEE-SSC---C---G---GG---GGG--SCCSEEEEBGGG---------
T ss_pred hcCCcEEEEeCCHHHHHHHHHHC-C-CCCEEEEe-ccc---c---H---HH---HHH--cCCcEEecCccc---------
Confidence 87445689999999999999986 4 67887633 211 0 0 00 000 013334333221
Q ss_pred CCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHH
Q 010685 326 LLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAA 391 (504)
Q Consensus 326 l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~ 391 (504)
.++.+|+.+|++|++|++||+|++ +++.+++++| ||||+||+|+.+.++
T Consensus 174 --~~~~~v~~~~~~G~~v~~wtvn~~------------~~~~~l~~~G---vdgI~TD~p~~~~~~ 222 (224)
T 1vd6_A 174 --VTEEAVAGWRKRGLFVVAWTVNEE------------GEARRLLALG---LDGLIGDRPEVLLPL 222 (224)
T ss_dssp --CCHHHHHHHHHTTCEEEEECCCCH------------HHHHHHHHTT---CSEEEESCHHHHTTS
T ss_pred --CCHHHHHHHHHCCCEEEEEeCCCH------------HHHHHHHhcC---CCEEEcCCHHHHHHh
Confidence 247899999999999999999753 7889999876 999999999876543
No 15
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=100.00 E-value=1.7e-40 Score=332.18 Aligned_cols=252 Identities=15% Similarity=0.172 Sum_probs=185.6
Q ss_pred CCCCCcEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCcccccccccccccccccccCC
Q 010685 87 LTGDPPFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLDNASNIAQIFKTQQKNYLVNG 166 (504)
Q Consensus 87 ~~~~~p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~rtT~~~~~~~~~~~~~~vdG 166 (504)
..+++|+||||||+++.+||||++||+.|++.|+| +||||||+||||++||+||.+|+|+|++. |
T Consensus 13 ~~~~~~~iiaHRG~~~~~pENTl~af~~A~~~g~d--~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~-------------g 77 (278)
T 3i10_A 13 PKSNKVLVVAHRGNWRSAPENSTAAIDSAIAMKVD--IVEIDIQKTKDGQLILMHDNTLDRTTTGK-------------G 77 (278)
T ss_dssp TTCCSCEEEEETSCTTTSCTTSHHHHHHHHHTTCS--EEEEEEEECTTSCEEECSSSBSTTTBSCC-------------S
T ss_pred CCCCCCEEEECCCCCCCCCccHHHHHHHHHHcCCC--EEEEEEEECCCCeEEEecCcchhhcCCCC-------------c
Confidence 34567999999999999999999999999999999 99999999999999999999999999853 2
Q ss_pred CCCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhccchHHHHHHHHHHH
Q 010685 167 VPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQHNLSMRSFVLSVSR 246 (504)
Q Consensus 167 ~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~~~~~~~~v~~~l~ 246 (504)
.|.|+||+||++++++.+.. .+.+ ++||||+|+|+++++ ++.+||+.. ..+++.++++++
T Consensus 78 ------~v~~~t~~el~~l~~~~~~~----~~~~--~~iptL~evl~~~~~-~~~~nie~~-------~~~~~~v~~~l~ 137 (278)
T 3i10_A 78 ------EIKNWTLADIKKLKLKDKDG----KVTN--YVVPTLEEALLTAKG-KIMVNLDKA-------YDIFDDVYAILE 137 (278)
T ss_dssp ------BGGGSCHHHHTTSCBBCTTS----CBCS--CCCCBHHHHHHHHTT-TSEEEEESC-------GGGHHHHHHHHH
T ss_pred ------eeecCcHHHHhcCCCCCCCc----ccCC--CCCCCHHHHHHHhcC-CeEEEEecC-------chHHHHHHHHHH
Confidence 79999999999999987632 3333 799999999999975 355555521 246788999999
Q ss_pred hcCCc---eEecCCHHHHHHHHHhcCCCCCcEEEEe-ccCCccCCCccccHHHHHhhHHHHHhhhcccccCC-ccccccC
Q 010685 247 SVVVN---YISSPEVNFLRSIAARFRPSMTKLVFRF-LGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPK-DYIWPVD 321 (504)
Q Consensus 247 ~~g~~---~isSfd~~~L~~l~~~~~~~~~~lv~~l-l~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~-~~i~~~~ 321 (504)
++++. +++|+ ..++.+++..+.....++|.. +. ..++. ..+.+..|++.+.|.. ...++..
T Consensus 138 ~~~~~~~v~i~s~--~~l~~~~~~~p~~~~~~l~~p~i~--~~~~~----------~~~~i~~~~~~~~p~~~~~~~~~~ 203 (278)
T 3i10_A 138 KTETQNQVIMKGG--QPIETVKREFGSYLDKVLYMPVID--LGNKE----------AEKIITDYLKELRPAAFEIIYSDP 203 (278)
T ss_dssp HHTCGGGEEEEES--SCHHHHHHHHGGGTTTSEEEEEEE--TTSTT----------HHHHHHHHHHHTCCSEEEEEBCCT
T ss_pred HcCCCCeEEEEEh--HHHHHHHHHCcCCccceEEEeeec--ccccc----------hHHHHHHHHHhcCceEEEEeecCC
Confidence 99873 77774 346666665421122333311 11 01111 2445666666555542 3333221
Q ss_pred ccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccC---CCChHHHHHHHhhc-CCCcccccccCCCCChHHHHHH
Q 010685 322 ESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNY---SYDPLTEYLSFIDN-GDFSVDGVLSDFPLTPSAAVDC 394 (504)
Q Consensus 322 ~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y---~~D~~~e~~~~i~~-G~~gVDGIiTD~P~~~~~~l~~ 394 (504)
....+.+|+.+|++|++|++||++++....++- ..||..+|.+++++ | ||||+||+|+.+.++++.
T Consensus 204 ----~~~~~~~v~~~~~~g~~v~~nTlw~~~~~g~~d~~a~~d~~~~~~~l~~~~G---vd~I~TD~P~~l~~yL~~ 273 (278)
T 3i10_A 204 ----KNPLPPKIKQLLFKKSLIWYNTLWGSLAGNHDDNLALTDPEKSYGYLIEQLG---ARILQTDQPAYLLDYLRK 273 (278)
T ss_dssp ----TCSSHHHHHHHHTTTSEEEEECSSGGGBTTCCHHHHHHCHHHHHHHHHHTTC---EEEEEESCHHHHHHHHHH
T ss_pred ----ccchHHHHHHHHHCCCEEEEEecccccccCccchhhccChHHHHHHHHhcCC---CCEEEeCCHHHHHHHHhh
Confidence 123478999999999999999998763221111 12777889999987 7 999999999999999864
No 16
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=99.97 E-value=1.9e-32 Score=274.73 Aligned_cols=227 Identities=13% Similarity=0.056 Sum_probs=153.5
Q ss_pred CCc-EEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCc---CcccccccccccccccccccC
Q 010685 90 DPP-FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLK---LDNASNIAQIFKTQQKNYLVN 165 (504)
Q Consensus 90 ~~p-~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~---l~rtT~~~~~~~~~~~~~~vd 165 (504)
.+| +||||| |||++||+.|++.|+| +||+|||+ |||++||+||.+ |+|+|++.
T Consensus 4 ~~p~~iiaHr-------ENTl~Af~~A~~~Gad--~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~~------------- 60 (285)
T 1xx1_A 4 RRPIWNLAHM-------VNAVAQIPDFLDLGAN--ALEADVTF-KGSVPTYTYHGTPCDFGRDCIRW------------- 60 (285)
T ss_dssp SEEEEEEESC-------CCSTTHHHHHHHHTCS--EEEEEEEE-ETTEEEEEECCSSCCTTSCSCCE-------------
T ss_pred CCCcEEEEeh-------hccHHHHHHHHHhCCC--EEEEEEEE-ECCEEEEEcCCcccccccccCCC-------------
Confidence 456 999999 9999999999999999 99999999 999999999999 99999853
Q ss_pred CCCCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhcc----chHHHHHH
Q 010685 166 GVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQH----NLSMRSFV 241 (504)
Q Consensus 166 G~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~~----~~~~~~~v 241 (504)
..|.|+ |+||++|++ + ..+.|.+ .|+ .++||||.+...... +..+++.+
T Consensus 61 ------g~v~d~-l~eL~~l~~--~---~~~~~~~----------~L~-----~l~iEiK~~~~~~~~~~~~~~~~~~~l 113 (285)
T 1xx1_A 61 ------EYFNVF-LKTLREYTT--P---GNAKYRD----------GFI-----LFVLDLKTGSLSNDQVRPAGENVAKEL 113 (285)
T ss_dssp ------EEHHHH-HHHHHHHTS--T---TCTTCCT----------TCC-----EEEEEECCTTCCHHHHHHHHHHHHHHH
T ss_pred ------ccHHHH-HHHHHHccc--C---CCCcccc----------ccc-----EEEEecCCCcccccccchhhhhHHHHH
Confidence 268999 999999987 2 1234443 222 799999986542211 11244443
Q ss_pred HHHHHhc----CC----ceEecCCHHHHHH-HHHh-------cCCCCCcEEEEeccCCccCCCccccHHHHHhhHHHHHh
Q 010685 242 LSVSRSV----VV----NYISSPEVNFLRS-IAAR-------FRPSMTKLVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT 305 (504)
Q Consensus 242 ~~~l~~~----g~----~~isSfd~~~L~~-l~~~-------~~~~~~~lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~ 305 (504)
++..... .. .+|+||++..|++ +++. . | ..++.+.+ .... .++ ... +..+..
T Consensus 114 l~~~~~~~~~~~~~~~~v~i~SF~~~~l~~~~~~~~~~~~~~~-p-~~~~~~l~-~~~~-~~~-~~~-------~~~~~~ 181 (285)
T 1xx1_A 114 LQNYWNNGNNGGRAYVVLSLPDIGHYEFVRGFKEVLKKEGHED-L-LEKVGYDF-SGPY-LPS-LPT-------LDATHE 181 (285)
T ss_dssp HHHTSGGGSSCCCCEEEEEESCGGGHHHHHHHHHHHHHTTCGG-G-GGGEEEEE-CCCC-SSS-CCC-------HHHHHH
T ss_pred HHHHhhccccccccceeEEEEeCCHHHHHHHHHHHhhhccccC-c-ccceEEec-cccc-ccc-hhh-------HHHHHH
Confidence 3333222 23 5789999999999 9987 4 3 57888643 2110 000 001 112222
Q ss_pred hhcccccCCccccccC---c----cccCCCCHHHHHHHHHcCC--eEEEecCCCCCCccccCCCChHHHHHHHhhcCCCc
Q 010685 306 FASGILVPKDYIWPVD---E----SLYLLPHTTIVLDAHKERL--EVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFS 376 (504)
Q Consensus 306 ~a~gi~~~~~~i~~~~---~----~~~l~~~~~lV~~ahk~Gl--~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~g 376 (504)
++..+++.. ..|... . ..+....+.+|+.+|++|+ +|++||+|++ +++.+++++|
T Consensus 182 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~Glg~~V~~WTvn~~------------~~~~~l~~~G--- 245 (285)
T 1xx1_A 182 AYKKAGVDG-HIWLSDGLTNFSPLGDMARLKEAIKSRDSANGFINKIYYWSVDKV------------STTKAALDVG--- 245 (285)
T ss_dssp HHHHHTCCS-CBEEEECSCCSSHHHHHHHHHHHHHHHTSTTCCCCEEEEECCCSH------------HHHHHHHHHT---
T ss_pred HHHHhCCCC-ccccccccccccccccHHHHhHHHHHHHHhcCCCCeEEEeeCCCH------------HHHHHHHhcC---
Confidence 222222211 111000 0 0000113678999999999 9999999754 7899999876
Q ss_pred ccccccCCCCChHHHHHH
Q 010685 377 VDGVLSDFPLTPSAAVDC 394 (504)
Q Consensus 377 VDGIiTD~P~~~~~~l~~ 394 (504)
|||||||+|+.+.++++.
T Consensus 246 VDgIiTD~P~~~~~~l~~ 263 (285)
T 1xx1_A 246 VDGIMTNYPNVLIGVLKE 263 (285)
T ss_dssp CSEEEESCHHHHHHHHHS
T ss_pred CCEEEeCCHHHHHHHHhh
Confidence 999999999998888864
No 17
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=99.88 E-value=2.8e-23 Score=203.93 Aligned_cols=95 Identities=18% Similarity=0.170 Sum_probs=85.4
Q ss_pred cceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc--C
Q 010685 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA--G 483 (504)
Q Consensus 406 ~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~--~ 483 (504)
..|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+. -...|+.|++. .
T Consensus 5 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~R~t~~~g~---v~~~t~~eL~~l~~ 81 (247)
T 2otd_A 5 PYPRIVAHRGGGKLAPENTLAAIDVGAKYGHKMIEFDAKLSKDGEIFLLHDDNLERTSNGWGV---AGELNWQDLLRVDA 81 (247)
T ss_dssp CCCSEEETTTTTTSSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBSSTTSSCCSB---GGGSCHHHHTTCCS
T ss_pred CCCeEEECCCCCCCCCchhHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCccccCCCCcc---HhhCcHHHHhhCCC
Confidence 458899999999999999999999999999999999999999999999999999999997653 24677778876 4
Q ss_pred CCccccccCHHHHhchhhhh
Q 010685 484 SGIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 484 ~~~~~~~~t~~ei~tL~~~~ 503 (504)
++||...|+.+.|+||++.|
T Consensus 82 g~~~~~~~~~~~iptL~evl 101 (247)
T 2otd_A 82 GSWYSKAFKGEPLPLLSQVA 101 (247)
T ss_dssp STTTCGGGTTCCCCBHHHHH
T ss_pred CCccCCCCCCCcCCCHHHHH
Confidence 68999999999999999876
No 18
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=99.88 E-value=2.6e-23 Score=204.92 Aligned_cols=94 Identities=28% Similarity=0.292 Sum_probs=85.1
Q ss_pred ceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc--CC
Q 010685 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA--GS 484 (504)
Q Consensus 407 ~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~--~~ 484 (504)
+|.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+||+.+.. ...|+.|++. .+
T Consensus 11 ~p~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~g~v---~~~t~~eL~~l~~~ 87 (252)
T 2pz0_A 11 KTLVIAHRGDSKNVPENTIAAFKRAMELGADGIELDVQLTKDGHLVVIHDETVDRTTNGEGFV---KDFTLEEIKKLDAG 87 (252)
T ss_dssp CCEEEEETTTTTTSCTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBSTTTSSCCSBG---GGSCHHHHTTSCSS
T ss_pred CceEEEcCCCCCCCCcchHHHHHHHHHcCCCEEEEEEEEecCCeEEEEcCCcccccCCCCcch---hhCcHHHHhhcCCC
Confidence 689999999999999999999999999999999999999999999999999999999976532 4677788886 45
Q ss_pred CccccccCHHHHhchhhhh
Q 010685 485 GIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 485 ~~~~~~~t~~ei~tL~~~~ 503 (504)
+||...|+.+.|+||++.|
T Consensus 88 ~~~~~~~~~~~iPtL~evL 106 (252)
T 2pz0_A 88 IKFGEKFAGERIPTLYEVF 106 (252)
T ss_dssp TTTCGGGTTCCCCBHHHHH
T ss_pred CCCCCCCCCCcCCCHHHHH
Confidence 7999889999999999876
No 19
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=99.87 E-value=7.8e-23 Score=201.56 Aligned_cols=96 Identities=23% Similarity=0.279 Sum_probs=86.1
Q ss_pred ccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc--
Q 010685 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA-- 482 (504)
Q Consensus 405 ~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~-- 482 (504)
.++|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+++|+|++.+.. ...++.|++.
T Consensus 7 ~~~p~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~~~v---~~~t~~el~~l~ 83 (252)
T 3qvq_A 7 SFLPQVIAHRGSSGQAPENTLASLHLAGQQGIKWVEIDVMLSGDGIPVIFHDDYLSRTTDGDGLI---YKTPLAELKQLD 83 (252)
T ss_dssp GGCCSEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECCCSBSTTTSSCCSBG---GGSCHHHHTTSC
T ss_pred CCCCEEEEeCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCcEEEECCCccccccCCCcee---ecCcHHHHhcCC
Confidence 35689999999999999999999999999999999999999999999999999999999976532 4677788876
Q ss_pred CCCccccccCHHHHhchhhhh
Q 010685 483 GSGIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 483 ~~~~~~~~~t~~ei~tL~~~~ 503 (504)
.++||...|+.+.|+||++.|
T Consensus 84 ~~~~~~~~~~~~~iptL~evl 104 (252)
T 3qvq_A 84 AGSWKGQEYQQETIPTLLEAI 104 (252)
T ss_dssp SSTTTCGGGTTCCCCBHHHHH
T ss_pred CCCccCccCCCCcCcCHHHHH
Confidence 468999999999999999876
No 20
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=99.84 E-value=6.8e-22 Score=198.40 Aligned_cols=98 Identities=24% Similarity=0.226 Sum_probs=81.9
Q ss_pred ccccceeEeeCCCCCCCCCCchHHHHHHH-HHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhc
Q 010685 403 SKSANLLVISKNGASGDYPSCTNLAYQKA-ISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIM 481 (504)
Q Consensus 403 ~~~~~~~iiaHRG~~~~~penT~~a~~~a-~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~ 481 (504)
....+|+||||||+++.+||||++||++| ++.|||+||+|||+||||++||+||.+|+|+|++.+.+ ...|+.|++
T Consensus 19 ~~~~~~~iiAHRG~~~~~PENTl~Af~~A~~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~g~v---~d~T~~eL~ 95 (287)
T 2oog_A 19 LTNERFTTIAHRGASGYAPEHTFQAYDKSHNELKASYIEIDLQRTKDGHLVAMHDETVNRTTNGHGKV---EDYTLDELK 95 (287)
T ss_dssp TTSCSSEEEETTTTTTTSCSSSHHHHHHHHHTSCCSEEEEEEEECTTCCEEECSSSBSTTTSSCCSBG---GGSCHHHHT
T ss_pred CCCCcceEEecCCCCCCCCchhHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCChhcccCCCCeeh---hhCcHHHHH
Confidence 34567899999999999999999999999 69999999999999999999999999999999976532 467777777
Q ss_pred cC--CCcccc--------ccCHHHHhchhhhh
Q 010685 482 AG--SGIFSF--------SLIWDEIQTLIRKL 503 (504)
Q Consensus 482 ~~--~~~~~~--------~~t~~ei~tL~~~~ 503 (504)
.. ++||.. .+..+.|+||++.|
T Consensus 96 ~l~~~~~f~~~~p~~~~~~~~~~~iPtL~evL 127 (287)
T 2oog_A 96 QLDAGSWFNKKYPKYARASYKNAKVPTLDEIL 127 (287)
T ss_dssp TSCSSHHHHHHCGGGCCGGGTTCCCCBHHHHH
T ss_pred hcCCCcccCccCccccccccCCccCCCHHHHH
Confidence 63 456653 35567788888765
No 21
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=99.84 E-value=1.4e-21 Score=192.14 Aligned_cols=86 Identities=26% Similarity=0.232 Sum_probs=70.3
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC--CC
Q 010685 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG--SG 485 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~--~~ 485 (504)
|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+.. ...|+.|++.. ++
T Consensus 2 ~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~Rtt~~~g~v---~~~t~~eL~~l~~g~ 78 (248)
T 1zcc_A 2 TKIVSHRGANRFAPENTFAAADLALQQGADYIELDVRESADGVLYVIHDETLDRTTNGTGPV---GHMLSSEIDTLDAGG 78 (248)
T ss_dssp CEEEETTTTTTTSCSSSHHHHHHHHHTTCSEEEEEEEECTTCCEEECSSSBTTTTSSCCSBS---TTSCHHHHTTSCSST
T ss_pred CeEEECCCCCCCCCchHHHHHHHHHHcCCCEEEEEeeEcCCCCEEEECCCccccccCCCcch---hhCCHHHHHhCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999965432 34555555543 22
Q ss_pred ccccccCHHHHhchhhhh
Q 010685 486 IFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 486 ~~~~~~t~~ei~tL~~~~ 503 (504)
|| .|+||++.|
T Consensus 79 ~~-------~iptL~evl 89 (248)
T 1zcc_A 79 WF-------DDRFKGAIV 89 (248)
T ss_dssp TT-------CGGGTTCCC
T ss_pred CC-------CCCCHHHHH
Confidence 32 466666544
No 22
>1ydy_A Glycerophosphoryl diester phosphodiesterase; structural genomics, PSI, protein structu initiative; 1.70A {Escherichia coli} SCOP: c.1.18.3 PDB: 1t8q_A
Probab=99.84 E-value=1.3e-21 Score=202.30 Aligned_cols=89 Identities=28% Similarity=0.367 Sum_probs=71.0
Q ss_pred ccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccCC
Q 010685 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAGS 484 (504)
Q Consensus 405 ~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~~ 484 (504)
..+|+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|++.+ .|+.+..+ .+
T Consensus 28 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~rtt~~~~-~f~~~~~~------~g 100 (356)
T 1ydy_A 28 SNEKIVIAHRGASGYLPEHTLPAKAMAYAQGADYLEQDLVMTKDDNLVVLHDHYLDRVTDVAD-RFPDRARK------DG 100 (356)
T ss_dssp -CCCEEEETTTTTTTSSTTCHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBCTTTBSHHH-HSTTCCCT------TS
T ss_pred CCCceEEEeCCCCCCCCcchHHHHHHHHHcCCCEEEeeeEECCCCcEEEeCCChHHhhcCccc-cccccccc------CC
Confidence 457899999999999999999999999999999999999999999999999999999999643 34333211 12
Q ss_pred CccccccCHHHHhchh
Q 010685 485 GIFSFSLIWDEIQTLI 500 (504)
Q Consensus 485 ~~~~~~~t~~ei~tL~ 500 (504)
.++..++||+||++|+
T Consensus 101 ~~~v~d~T~~eL~~l~ 116 (356)
T 1ydy_A 101 RYYAIDFTLDEIKSLK 116 (356)
T ss_dssp CCBGGGSCHHHHHHSC
T ss_pred CcchhhCcHHHHHhCC
Confidence 2345566666666554
No 23
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=99.84 E-value=1.6e-20 Score=186.14 Aligned_cols=226 Identities=14% Similarity=0.113 Sum_probs=143.6
Q ss_pred CCCc-EEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCc---cccccccccccccccccc
Q 010685 89 GDPP-FVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD---NASNIAQIFKTQQKNYLV 164 (504)
Q Consensus 89 ~~~p-~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~---rtT~~~~~~~~~~~~~~v 164 (504)
..+| .||||| |||++||+.|++.||+ +||+||++||||++|++||...- |.+....
T Consensus 25 ~~rp~~~i~H~-------vNTl~~~~~a~~~GAn--~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~~~~----------- 84 (302)
T 3rlg_A 25 NRRPIWIMGAM-------VNAIGQIDEFVNLGAN--SIETDVSFDDNANPEYTYHGIPCDCGRNCKKYE----------- 84 (302)
T ss_dssp CCEEEEEEESC-------CCSHHHHHHHHHTTCS--EEEEEECBCTTSCBCBCCCCSSCCTTCCSCCCC-----------
T ss_pred CCCceEEEeeh-------hhhHHHHHHHHHcCCC--EEEEEEEECCCCCEEEEECCCCcchhccCCCCc-----------
Confidence 3445 699996 9999999999999999 99999999999999999998543 3333110
Q ss_pred CCCCCCCcccccCCHHHHhcCcccCCccCCCCCCCCCCcccCCHHHHHHHhCCCceEEeeccchhhhc----cchHHHHH
Q 010685 165 NGVPTPGWFSIDYTLNDLSNIILNQGVYSRTDKFDGNGFQILTVQDMARQIKPPGLWLNIQHDAFYAQ----HNLSMRSF 240 (504)
Q Consensus 165 dG~~~~g~~v~d~Tl~EL~~l~~~~~~~~r~~~~~g~~~~IpTLeEvL~~~k~~~l~iEIK~~~~~~~----~~~~~~~~ 240 (504)
.+.+ .+++|++++--. +++|.. +=.-+++++|.+..... .|.++++.
T Consensus 85 --------~~~~-~l~~lr~~ttpg-----~~k~~~---------------~l~lv~~DlK~~~l~~~~~~~aG~~la~k 135 (302)
T 3rlg_A 85 --------NFND-FLKGLRSATTPG-----NSKYQE---------------KLVLVVFDLKTGSLYDNQANDAGKKLAKN 135 (302)
T ss_dssp --------BHHH-HHHHHHHHHSTT-----STTCCT---------------TCCEEEEEECGGGSCGGGHHHHHHHHHHH
T ss_pred --------cHHH-HHHHHHHhcCCC-----CCcccc---------------ceEEEEEEcCCCCCCHHHHHHhHHHHHHH
Confidence 2344 778887664321 223332 11348899998766543 36788888
Q ss_pred HHHHHHhcCC------ceEecCCHH---HHHHHHHhcC-CC----CCcEEEEeccCCccCCCccccHHHHHh--hHHHHH
Q 010685 241 VLSVSRSVVV------NYISSPEVN---FLRSIAARFR-PS----MTKLVFRFLGKSEIEPTTNQTYGSLLK--NLTFIK 304 (504)
Q Consensus 241 v~~~l~~~g~------~~isSfd~~---~L~~l~~~~~-~~----~~~lv~~ll~~~~~~~~~~~~y~~l~~--~l~~i~ 304 (504)
+++.+-+.|. +++|+|+.+ +|+.+++.+. .. --++.|-+...++ ...+..+.+ +++...
T Consensus 136 Ll~~~w~~g~~~~ra~vilsi~~~~~~~~l~gf~~~l~~~g~~~LldkvG~Dfs~n~d-----l~~i~~~~~~~Gi~~h~ 210 (302)
T 3rlg_A 136 LLQHYWNNGNNGGRAYIVLSIPDLNHYPLIKGFKDQLTKDGHPELMDKVGHDFSGNDD-----IGDVGKAYKKAGITGHI 210 (302)
T ss_dssp HHHHTSGGGSSCCCCEEEEEESCGGGTHHHHHHHHHHHHTTCGGGGGGEEEEECSCCC-----HHHHHHHHHHTTCCSCB
T ss_pred HHHHHHhcCCCCceeEEEEecCcchHHHHHHHHHHHHhhcCHHHHhhhcCccccCCCC-----HHHHHHHHHhcCCcCcE
Confidence 8887765332 478999876 4444432110 00 1234444432221 122333322 222233
Q ss_pred hhhcccccCCccccccCccccCCCCHHHHHHHHHc-----C--CeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcc
Q 010685 305 TFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKE-----R--LEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSV 377 (504)
Q Consensus 305 ~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~-----G--l~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gV 377 (504)
-+++||.+++ +. ...-++.+.+. | ++|++||||++ +++++++++| |
T Consensus 211 wqsDGItnC~--~r----------~~~rl~~ai~~RDs~~~~i~~V~vWTVNd~------------~~m~~l~~~G---V 263 (302)
T 3rlg_A 211 WQSDGITNCL--PR----------GLSRVNAAVANRDSANGFINKVYYWTVDKR------------STTRDALDAG---V 263 (302)
T ss_dssp EEEEECCTTS--CC----------CSHHHHHHHHHHTSTTCCCSEEEEECCCSH------------HHHHHHHHTT---C
T ss_pred EecCCcccce--ec----------cHHHHHHHHHhccCCCCceEEEEEEeCCCH------------HHHHHHHHcC---C
Confidence 3466776664 11 12233333332 3 79999999864 7899999876 9
Q ss_pred cccccCCCCChHHHHHHh
Q 010685 378 DGVLSDFPLTPSAAVDCF 395 (504)
Q Consensus 378 DGIiTD~P~~~~~~l~~~ 395 (504)
||||||+|+.+.++++..
T Consensus 264 DGIITD~Pd~l~~~l~~~ 281 (302)
T 3rlg_A 264 DGIMTNYPDVITDVLNEA 281 (302)
T ss_dssp SEEEESCHHHHHHHHTSH
T ss_pred CEEECCCHHHHHHHHHhc
Confidence 999999999999988643
No 24
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=99.83 E-value=3.6e-21 Score=190.05 Aligned_cols=63 Identities=11% Similarity=0.173 Sum_probs=59.5
Q ss_pred ccceeEeeCCCCC--CCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCc---CcccccCCCC
Q 010685 405 SANLLVISKNGAS--GDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI---NLINSTNAAQ 467 (504)
Q Consensus 405 ~~~~~iiaHRG~~--~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~---~l~r~t~~~~ 467 (504)
..+|+||||||++ +.+||||++||++|++.|||+||+|||+||||++||+||. +|+|+||+.+
T Consensus 4 ~~~~~iiaHRG~~~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~~~~l~Rtt~~~g 71 (258)
T 2o55_A 4 VIIPKIVGHRGVGKEGLAPENTLRSFVLCMERNIPYIETDLRVCKTGEIVLFHGTPEGTIPFYKDGTS 71 (258)
T ss_dssp CCCCEEEEETTTTTSTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECCCSTTSBCTTSTTTTC
T ss_pred ccCceEEECCCCCCCCCCCccHHHHHHHHHHcCcCEEEEEEEEecCCeEEEEeCCCCccceeeCCCCe
Confidence 4578999999999 9999999999999999999999999999999999999999 9999998643
No 25
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=99.83 E-value=4.6e-21 Score=194.68 Aligned_cols=68 Identities=26% Similarity=0.360 Sum_probs=60.8
Q ss_pred hcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccC
Q 010685 397 HLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTN 464 (504)
Q Consensus 397 ~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~ 464 (504)
+..+......++.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+|+
T Consensus 7 ~~~~~~~~~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lTkDg~~Vv~HD~~l~rtt~ 74 (313)
T 3l12_A 7 QLEGLRGHPSVVRVIGHRGARGVMPENTLEGFAFTLAAGVRALEFDVVMTADGVPVVTHNHHLANAMT 74 (313)
T ss_dssp GGGGTCCBTTBCEEEEETTTTTTSCTTCHHHHHHHHHTTCCEEEEEEEECTTSCEEECSSSBCCTTTC
T ss_pred cccccccCCCCeEEEEcCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCCEEEECCchhccccc
Confidence 33333444567899999999999999999999999999999999999999999999999999999964
No 26
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=99.83 E-value=1.7e-21 Score=190.03 Aligned_cols=62 Identities=26% Similarity=0.293 Sum_probs=58.8
Q ss_pred ccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCC
Q 010685 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAA 466 (504)
Q Consensus 405 ~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~ 466 (504)
+...+||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+|+||+.
T Consensus 10 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDG~lVv~HD~~l~Rtt~~~ 71 (234)
T 1o1z_A 10 HHHVIVLGHRGYSAKYLENTLEAFMKAIEAGANGVELDVRLSKDGKVVVSHDEDLKRLFGLD 71 (234)
T ss_dssp CCCCEEEEETTTTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEEHHHHCEE
T ss_pred cceEEEEEcCCCCCCCCCchHHHHHHHHHcCCCEEEEEeeEecCCCEEEEcCCcHHhcCCcC
Confidence 44678999999999999999999999999999999999999999999999999999999854
No 27
>3i10_A Putative glycerophosphoryl diester phosphodiester; NP_812074.1; HET: MSE; 1.35A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.83 E-value=3.5e-21 Score=192.40 Aligned_cols=96 Identities=23% Similarity=0.208 Sum_probs=80.4
Q ss_pred cccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhccC
Q 010685 404 KSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMAG 483 (504)
Q Consensus 404 ~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~~ 483 (504)
...+|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|++.+.. ...|+.+++..
T Consensus 14 ~~~~~~iiaHRG~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~vv~HD~~l~r~t~~~g~v---~~~t~~el~~l 90 (278)
T 3i10_A 14 KSNKVLVVAHRGNWRSAPENSTAAIDSAIAMKVDIVEIDIQKTKDGQLILMHDNTLDRTTTGKGEI---KNWTLADIKKL 90 (278)
T ss_dssp TCCSCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSBSTTTBSCCSBG---GGSCHHHHTTS
T ss_pred CCCCCEEEECCCCCCCCCccHHHHHHHHHHcCCCEEEEEEEECCCCeEEEecCcchhhcCCCCcee---ecCcHHHHhcC
Confidence 445789999999999999999999999999999999999999999999999999999999976532 45667777753
Q ss_pred --CCccccccCHHHHhchhhhh
Q 010685 484 --SGIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 484 --~~~~~~~~t~~ei~tL~~~~ 503 (504)
+.|+. .++.+.|+||++.|
T Consensus 91 ~~~~~~~-~~~~~~iptL~evl 111 (278)
T 3i10_A 91 KLKDKDG-KVTNYVVPTLEEAL 111 (278)
T ss_dssp CBBCTTS-CBCSCCCCBHHHHH
T ss_pred CCCCCCc-ccCCCCCCCHHHHH
Confidence 34543 45667788887765
No 28
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=99.83 E-value=3.6e-21 Score=191.32 Aligned_cols=98 Identities=16% Similarity=0.113 Sum_probs=73.5
Q ss_pred cceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCccc----ccCCCC------CcccCccc
Q 010685 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN----STNAAQ------SKFNSITT 475 (504)
Q Consensus 406 ~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r----~t~~~~------~~~~~~~~ 475 (504)
..+.||||||+++.+||||++||++|++.|||+||+|||+||||++||+||.+|+| +|++.+ ........
T Consensus 7 ~~~~iiaHRG~~~~~PENTl~Af~~A~~~Gad~iE~DV~lTkDg~lVv~HD~~l~r~~~~tt~g~~~~~~~~~~~~v~d~ 86 (272)
T 3ch0_A 7 ASFDIQGHRGCRGLLPENTIAAFTKALLLGVTTLEFDLVISKDNRVVVSHDTFFHHEITMMVDGEDVTEANEKNFNLYAM 86 (272)
T ss_dssp TTCEEEETTTTTTTSSTTSHHHHHHHHHHTCSEEEEEEEECTTCCEEECSSSBCCTTTCCEETTEECCTTTGGGSBGGGS
T ss_pred ccccEEecCCCCCCCCcccHHHHHHHHHcCCCEEEEeeeEcCCCcEEEeCCCcccccccccCCCcccccccccCceeecC
Confidence 35789999999999999999999999999999999999999999999999999999 455321 01123345
Q ss_pred chhhhccC--CCccccccCHH-----HHhchhhhh
Q 010685 476 TIPEIMAG--SGIFSFSLIWD-----EIQTLIRKL 503 (504)
Q Consensus 476 ~~~~~~~~--~~~~~~~~t~~-----ei~tL~~~~ 503 (504)
|+.|++.. ++||...|..+ .|+||++.|
T Consensus 87 t~~eL~~l~~~~~~~~~~~~~~~~~~~iptL~evl 121 (272)
T 3ch0_A 87 NYADIKEIDVGMKTHPRFKSQKKVPAVKPLFRELI 121 (272)
T ss_dssp CHHHHTTSCCSSSCCTTCTTSCCCCCCCCBHHHHH
T ss_pred CHHHHHhcCCCCccCccCcccccCCCCCcCHHHHH
Confidence 55565542 35665555433 366666544
No 29
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=99.82 E-value=2.4e-21 Score=190.77 Aligned_cols=73 Identities=11% Similarity=0.168 Sum_probs=63.7
Q ss_pred ceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc
Q 010685 407 NLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (504)
Q Consensus 407 ~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~ 482 (504)
.|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||++++|+|++.+.. ...++.+++.
T Consensus 2 mp~iiaHRG~~~~~pENTl~af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~r~t~~~g~v---~~~t~~el~~ 74 (250)
T 3ks6_A 2 MTRIASHRGGTLEFGDSTPHGFTATAAMALEEVEFDLHPTADGAIVVHHDPTLDATTDMTGAI---VDMTLAKVKT 74 (250)
T ss_dssp CCEEEEETTTHHHHCTTCHHHHHHHHTSSSSEEEEEEEECTTSCEEECSSSBSTTTBSCCSBG---GGSCHHHHHH
T ss_pred CceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEEeEccCCCEEEECCCccccccCCCCee---ecCcHHHHhc
Confidence 589999999999999999999999999999999999999999999999999999999965422 2444445543
No 30
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=99.80 E-value=3e-20 Score=186.96 Aligned_cols=96 Identities=17% Similarity=0.134 Sum_probs=77.0
Q ss_pred cccceeEeeCCCCCC-CCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcccccCCCCCcccCcccchhhhcc
Q 010685 404 KSANLLVISKNGASG-DYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLINSTNAAQSKFNSITTTIPEIMA 482 (504)
Q Consensus 404 ~~~~~~iiaHRG~~~-~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r~t~~~~~~~~~~~~~~~~~~~ 482 (504)
...+|+||||||+++ .+||||++||++|++.|+|+||+|||+||||++||+||.+|+|+|++.+.. ...|+.+++.
T Consensus 28 ~~~~~~iiaHRG~~~~~~pENTl~af~~A~~~g~d~iE~Dv~~TkDg~~Vv~HD~~l~rtt~~~g~v---~~~t~~el~~ 104 (292)
T 3mz2_A 28 DDRIPLISGHRGGRGKGYPENSMETFENTLSYTPATFEIDPRLTKDSVIVLFHDDTLERTSNGTGKV---SDYTWEELQN 104 (292)
T ss_dssp TTCCCEEEEGGGCCBTTBCTTCHHHHHHHHHHCCCEEEECEEECTTCCEEECCSSSSTTTBSCCSCG---GGSCHHHHTT
T ss_pred CCCCCEEEECCCCCCCCCCccHHHHHHHHHHcCCCEEEEEEeECCCCcEEEECCchhcccCCCCCch---hhCcHHHHhc
Confidence 446789999999985 799999999999999999999999999999999999999999999975532 3566666665
Q ss_pred CC--CccccccCHHHHhchhhhh
Q 010685 483 GS--GIFSFSLIWDEIQTLIRKL 503 (504)
Q Consensus 483 ~~--~~~~~~~t~~ei~tL~~~~ 503 (504)
.. .++ ..++.+.|+||++.|
T Consensus 105 l~~~~~~-~~~~~~~iptL~evl 126 (292)
T 3mz2_A 105 FRLKDPE-GNITNYRIPTLEEAI 126 (292)
T ss_dssp SCBBCTT-CCBCSCCCCBHHHHH
T ss_pred CCCCCCC-CccCCcCCCCHHHHH
Confidence 32 222 235556677777655
No 31
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=99.78 E-value=7.3e-20 Score=177.12 Aligned_cols=56 Identities=20% Similarity=0.143 Sum_probs=53.0
Q ss_pred ccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010685 405 SANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 405 ~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..+|+||||||+++.+||||++||++|++.|+|+||+|||+||||++||+||.+++
T Consensus 5 ~~~~~iiaHRG~~~~~PENTl~Af~~A~~~G~d~iE~DV~lT~Dg~lVv~HD~~l~ 60 (224)
T 1vd6_A 5 RQRPLRLGHRGAPLKAKENTLESFRLALEAGLDGVELDVWPTRDGVFAVRHDPDTP 60 (224)
T ss_dssp --CCEEEEETSCTTTSCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSCSEET
T ss_pred CCCceEEECCCCCCCCCcchHHHHHHHHHcCCCEEEEEeeEecCCcEEEECCCccC
Confidence 35689999999999999999999999999999999999999999999999999998
No 32
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=99.77 E-value=3e-19 Score=174.47 Aligned_cols=56 Identities=16% Similarity=0.118 Sum_probs=53.7
Q ss_pred cceeEeeCCCC--CCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCccc
Q 010685 406 ANLLVISKNGA--SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLIN 461 (504)
Q Consensus 406 ~~~~iiaHRG~--~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~r 461 (504)
.+|.||||||+ ++.+||||++||++|++.|+|+||+|||+||||++||+||++++|
T Consensus 3 ~~~~iiaHRG~~~~~~~pENTl~Af~~A~~~G~d~iE~DV~lT~Dg~~Vv~HD~~l~~ 60 (238)
T 3no3_A 3 DNTKVIAHRGYWKTEGSAQNSIRSLERASEIGAYGSEFDVHLTADNVLVVYHDNDIQG 60 (238)
T ss_dssp CCCEEEETTSSCSSTTCCTTSHHHHHHHHHTTCSEEEEEEEECTTSCEEECSSSEETT
T ss_pred CCCeEEeCCCCCCCCCCCccHHHHHHHHHHcCCCEEEEEeeEccCCcEEEECCCCCCC
Confidence 46899999999 689999999999999999999999999999999999999999997
No 33
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=99.56 E-value=9.8e-16 Score=153.07 Aligned_cols=68 Identities=7% Similarity=0.027 Sum_probs=59.0
Q ss_pred cce-eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcC---cccccCCCCCcccCcccchhhhc
Q 010685 406 ANL-LVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFIN---LINSTNAAQSKFNSITTTIPEIM 481 (504)
Q Consensus 406 ~~~-~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~---l~r~t~~~~~~~~~~~~~~~~~~ 481 (504)
.+| +||||| |||++||++|++.|||+||+|||+ |||++||+||.+ |+|+|++.+
T Consensus 4 ~~p~~iiaHr-------ENTl~Af~~A~~~Gad~IE~DV~l-kDG~lVv~HD~~~~~l~Rtt~~~g-------------- 61 (285)
T 1xx1_A 4 RRPIWNLAHM-------VNAVAQIPDFLDLGANALEADVTF-KGSVPTYTYHGTPCDFGRDCIRWE-------------- 61 (285)
T ss_dssp SEEEEEEESC-------CCSTTHHHHHHHHTCSEEEEEEEE-ETTEEEEEECCSSCCTTSCSCCEE--------------
T ss_pred CCCcEEEEeh-------hccHHHHHHHHHhCCCEEEEEEEE-ECCEEEEEcCCcccccccccCCCc--------------
Confidence 456 899999 999999999999999999999999 999999999999 999998543
Q ss_pred cCCCccccccCHHHHhchhh
Q 010685 482 AGSGIFSFSLIWDEIQTLIR 501 (504)
Q Consensus 482 ~~~~~~~~~~t~~ei~tL~~ 501 (504)
...++ ++||++|+.
T Consensus 62 -----~v~d~-l~eL~~l~~ 75 (285)
T 1xx1_A 62 -----YFNVF-LKTLREYTT 75 (285)
T ss_dssp -----EHHHH-HHHHHHHTS
T ss_pred -----cHHHH-HHHHHHccc
Confidence 13467 777777653
No 34
>3rlg_A Sphingomyelin phosphodiesterase D lisictox-alphai; TIM beta/alpha-barrel, PLC-like phosphodiesterase, inactive H12A phospholipase D; HET: PGE; 1.60A {Loxosceles intermedia} PDB: 3rlh_A*
Probab=98.46 E-value=9.6e-08 Score=94.83 Aligned_cols=50 Identities=8% Similarity=0.045 Sum_probs=44.8
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCc---CcccccC
Q 010685 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFI---NLINSTN 464 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~---~l~r~t~ 464 (504)
..||||| |||+++|+.|++.||++||+||++|+||++|++||. +..|...
T Consensus 29 ~~~i~H~-------vNTl~~~~~a~~~GAn~IE~DV~~~~dg~~v~~hhg~pcdc~r~C~ 81 (302)
T 3rlg_A 29 IWIMGAM-------VNAIGQIDEFVNLGANSIETDVSFDDNANPEYTYHGIPCDCGRNCK 81 (302)
T ss_dssp EEEEESC-------CCSHHHHHHHHHTTCSEEEEEECBCTTSCBCBCCCCSSCCTTCCSC
T ss_pred eEEEeeh-------hhhHHHHHHHHHcCCCEEEEEEEECCCCCEEEEECCCCcchhccCC
Confidence 4799997 999999999999999999999999999999999999 4445443
No 35
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=92.38 E-value=0.087 Score=57.79 Aligned_cols=50 Identities=14% Similarity=0.120 Sum_probs=42.8
Q ss_pred eeCCC---CCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010685 411 ISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 411 iaHRG---~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
.+|.- |.-...+.|..+|.+|+..||.+||+|++=-.||.|||+|-.+|.
T Consensus 177 SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcRcvElD~wdg~~~ep~v~HG~tlt 229 (624)
T 1djx_A 177 SSHNTYLLEDQLTGPSSTEAYIRALCKGCRCLELDCWDGPNQEPIIYHGYTFT 229 (624)
T ss_dssp EESSTTBSSCSSSCCBCHHHHHHHHHTTCCEEEEEEECCGGGCCEECCTTSCC
T ss_pred cccchhhhcCcccCCcCHHHHHHHHHhCCcEEEEEeecCCCCCeEEecCCccc
Confidence 46653 234567899999999999999999999999999999999998874
No 36
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=91.54 E-value=0.12 Score=58.22 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=44.0
Q ss_pred eeEeeCCC---CCCCCCCchHHHHHHHHHcCCCEEEeeeeeec--CCeEEEecCcCcc
Q 010685 408 LLVISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK--DGVPFCLSFINLI 460 (504)
Q Consensus 408 ~~iiaHRG---~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~--Dg~~v~~Hd~~l~ 460 (504)
.+-.+|.= |.-..-+.|..+|.+|+..||.+||+|++=-+ ||.|||+|-.+|.
T Consensus 322 fI~SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcRcvElD~Wdg~~~~~ep~v~HG~Tlt 379 (799)
T 2zkm_X 322 FINSSHNTYLTAGQFSGLSSAEMYRQVLLSGCRCVELDCWKGKPPDEEPIITHGFTMT 379 (799)
T ss_dssp EECBBSSTTBSSCSSSSCBCTHHHHHHHHTTCCEEEEEEECCCTTCCSCEECCTTSSC
T ss_pred eEeccccceeecCcccCcccHHHHHHHHHhCCCEEEEEeecCCCCCCCCEEEeCCccc
Confidence 34466764 23456789999999999999999999999877 9999999998874
No 37
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=91.47 E-value=0.12 Score=56.83 Aligned_cols=50 Identities=16% Similarity=0.080 Sum_probs=43.7
Q ss_pred EEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCc
Q 010685 95 VARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (504)
Q Consensus 95 iaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~ 146 (504)
.+|-- +.-+.-+.|.++|..|+..|+. .||+|++=-.||.|||+|..+|.
T Consensus 177 SsHNTYL~G~Ql~~~ss~e~y~~aL~~GcR--cvElD~wdg~~~ep~v~HG~tlt 229 (624)
T 1djx_A 177 SSHNTYLLEDQLTGPSSTEAYIRALCKGCR--CLELDCWDGPNQEPIIYHGYTFT 229 (624)
T ss_dssp EESSTTBSSCSSSCCBCHHHHHHHHHTTCC--EEEEEEECCGGGCCEECCTTSCC
T ss_pred cccchhhhcCcccCCcCHHHHHHHHHhCCc--EEEEEeecCCCCCeEEecCCccc
Confidence 46755 3456789999999999999999 99999999999999999999874
No 38
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=90.92 E-value=0.14 Score=57.68 Aligned_cols=50 Identities=18% Similarity=0.098 Sum_probs=43.3
Q ss_pred EEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEec--CCeEEEecCCcCc
Q 010685 95 VARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTK--DEAGICFPDLKLD 146 (504)
Q Consensus 95 iaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTk--Dg~~Vv~HD~~l~ 146 (504)
.+|-- +.-+.-+.|.++|..|+..|+. .||+|++=-+ ||.|||+|..+|.
T Consensus 325 SSHNTYL~g~Ql~g~ss~e~y~~aL~~GcR--cvElD~Wdg~~~~~ep~v~HG~Tlt 379 (799)
T 2zkm_X 325 SSHNTYLTAGQFSGLSSAEMYRQVLLSGCR--CVELDCWKGKPPDEEPIITHGFTMT 379 (799)
T ss_dssp BBSSTTBSSCSSSSCBCTHHHHHHHHTTCC--EEEEEEECCCTTCCSCEECCTTSSC
T ss_pred ccccceeecCcccCcccHHHHHHHHHhCCC--EEEEEeecCCCCCCCCEEEeCCccc
Confidence 45655 3456789999999999999999 9999999887 9999999999874
No 39
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=90.44 E-value=0.17 Score=57.05 Aligned_cols=54 Identities=15% Similarity=0.123 Sum_probs=44.8
Q ss_pred ceeEeeCCCC---CCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEecCcCcc
Q 010685 407 NLLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLSFINLI 460 (504)
Q Consensus 407 ~~~iiaHRG~---~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~Hd~~l~ 460 (504)
..+-.+|+-+ .-...+.|..+|.+|+..||.+||+|++=.+||.|||+|-.+|.
T Consensus 332 YfI~sshntyL~g~ql~g~ss~~~y~~aL~~gcRcvEld~wdg~~~ePvv~HG~Tlt 388 (816)
T 3qr0_A 332 YYINSSHNTYLTGHQLTGKSSVEIYRQVLLTGCRCLELDCWDGKDGEPIITHGFTMC 388 (816)
T ss_dssp EEECBBSSTTBSSCTTTSCBCSHHHHHHHHTTCCEEEEEEECCTTSSCEECCTTSSC
T ss_pred heecccccchhccccccCcccHHHHHHHHHhCCcEEEEEEecCCCCCceEccCCccc
Confidence 3344667642 34567899999999999999999999999999999999998874
No 40
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=89.70 E-value=0.2 Score=56.53 Aligned_cols=50 Identities=20% Similarity=0.064 Sum_probs=43.7
Q ss_pred EEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEecCCcCc
Q 010685 95 VARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICFPDLKLD 146 (504)
Q Consensus 95 iaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~HD~~l~ 146 (504)
.+|.- +.-+.-+.|.++|..|+..|+. .||+|++=-+||.|||+|..+|.
T Consensus 336 sshntyL~g~ql~g~ss~~~y~~aL~~gcR--cvEld~wdg~~~ePvv~HG~Tlt 388 (816)
T 3qr0_A 336 SSHNTYLTGHQLTGKSSVEIYRQVLLTGCR--CLELDCWDGKDGEPIITHGFTMC 388 (816)
T ss_dssp BBSSTTBSSCTTTSCBCSHHHHHHHHTTCC--EEEEEEECCTTSSCEECCTTSSC
T ss_pred ccccchhccccccCcccHHHHHHHHHhCCc--EEEEEEecCCCCCceEccCCccc
Confidence 45655 3456779999999999999999 99999999999999999999874
No 41
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=87.25 E-value=0.31 Score=55.36 Aligned_cols=53 Identities=15% Similarity=0.131 Sum_probs=42.8
Q ss_pred eeEeeCCCC---CCCCCCchHHHHHHHHHcCCCEEEeeeeee--cCCeEEEecCcCcc
Q 010685 408 LLVISKNGA---SGDYPSCTNLAYQKAISDGVDFIDCPVQMS--KDGVPFCLSFINLI 460 (504)
Q Consensus 408 ~~iiaHRG~---~~~~penT~~a~~~a~~~g~~~iE~Dv~~t--~Dg~~v~~Hd~~l~ 460 (504)
.+-.+|+-+ .-..-+.|..+|.+|+..||.+||+|++=- +||.|||+|-.+|.
T Consensus 326 fI~ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcRcvEld~wdg~~~~~ep~v~hg~t~t 383 (885)
T 3ohm_B 326 FINSSHNTYLTAGQLAGTSSVEMYRQALLWGCRCVELDVWKGRPPEEEPFITHGFTMT 383 (885)
T ss_dssp EECCBSSTTBSSCSSEECBCSHHHHHHHHTTCCEEEEEEECCCSSSCCCEECSTTSEE
T ss_pred eeeccccceeccccccCcCcHHHHHHHHHhCCCEEEEEeeCCCCCCCCCEEeeCCccc
Confidence 344566642 234568899999999999999999999965 78999999999874
No 42
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=84.90 E-value=0.4 Score=54.49 Aligned_cols=50 Identities=14% Similarity=0.060 Sum_probs=42.1
Q ss_pred EEeCC---CCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEe--cCCeEEEecCCcCc
Q 010685 95 VARGG---FSGIFPDSSSIAYSLTLITSAPSVILWCDVQLT--KDEAGICFPDLKLD 146 (504)
Q Consensus 95 iaHRG---~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlT--kDg~~Vv~HD~~l~ 146 (504)
.+|.- +..+.-+.|.++|..|+..|+. .||+|++=- +||.|||+|..+|.
T Consensus 329 ssHNtYL~g~Ql~~~ss~~~y~~aL~~gcR--cvEld~wdg~~~~~ep~v~hg~t~t 383 (885)
T 3ohm_B 329 SSHNTYLTAGQLAGTSSVEMYRQALLWGCR--CVELDVWKGRPPEEEPFITHGFTMT 383 (885)
T ss_dssp CBSSTTBSSCSSEECBCSHHHHHHHHTTCC--EEEEEEECCCSSSCCCEECSTTSEE
T ss_pred ccccceeccccccCcCcHHHHHHHHHhCCC--EEEEEeeCCCCCCCCCEEeeCCccc
Confidence 45655 2345678999999999999999 999999965 78999999999874
No 43
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=66.35 E-value=8.3 Score=38.49 Aligned_cols=50 Identities=14% Similarity=0.007 Sum_probs=35.9
Q ss_pred cEEEEeCCCCCCCCchHHHHHHHHHHcCCCCcEEEEeeEEec-CCeEEEecCCcCcc
Q 010685 92 PFVVARGGFSGIFPDSSSIAYSLTLITSAPSVILWCDVQLTK-DEAGICFPDLKLDN 147 (504)
Q Consensus 92 p~viaHRG~~~~~pEnT~~a~~~A~~~g~d~~~vE~DVqlTk-Dg~~Vv~HD~~l~r 147 (504)
..+-+|--+..- +...+..|++.|+. +||+||+-.. .|.+-|+|...|.+
T Consensus 32 T~~g~HNSY~~g----~~~~i~~qLd~GVR--~LELDIw~n~~~g~~~V~Hg~~l~~ 82 (339)
T 3h4x_A 32 TSVGVHNAYEKE----KYRYFADALDSGAA--LLELDLWSNALGRSWRVSHSNPLGN 82 (339)
T ss_dssp EEEEETTTTCTT----TCSSHHHHHTTCCS--EEEEEEESSSSSSSCEECSSSCSSC
T ss_pred eEeecccccccc----CcccHHHHHHhCCC--EEEEEeecCCCCCCeEEeCCCcccc
Confidence 456667543221 14678899999999 9999999874 45688899876543
No 44
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=64.28 E-value=31 Score=31.69 Aligned_cols=141 Identities=9% Similarity=0.057 Sum_probs=84.7
Q ss_pred cccCCHHHHHHHhCC--CceEEeeccchhhhccchHHHHHHHHHHHh-cCCceEecCCHHHHHHHHHhcCCCCCcEEEEe
Q 010685 203 FQILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRS-VVVNYISSPEVNFLRSIAARFRPSMTKLVFRF 279 (504)
Q Consensus 203 ~~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~-~g~~~isSfd~~~L~~l~~~~~~~~~~lv~~l 279 (504)
-.|-+|+++.+.+++ ..+.|.+.... |+.-.+.-++.|++ ++...|-|-....++..++.. -.-.+.+| +
T Consensus 38 g~i~~l~~~v~~lk~~~K~v~Vh~Dli~-----Gls~d~~ai~fL~~~~~pdGIIsTk~~~i~~Ak~~g-L~tIqR~F-l 110 (192)
T 3kts_A 38 THVAQLKALVKYAQAGGKKVLLHADLVN-----GLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHK-MLAIQRLF-M 110 (192)
T ss_dssp EETTTHHHHHHHHHHTTCEEEEEGGGEE-----TCCCSHHHHHHHHHTTCCSEEEESCHHHHHHHHHTT-CEEEEEEE-C
T ss_pred CcHHHHHHHHHHHHHcCCeEEEecCchh-----ccCCcHHHHHHHHhCCCCCEEEeCcHHHHHHHHHCC-CeEEEEEE-E
Confidence 378899999998864 34555544211 11111233555555 477877788999999998863 11244444 3
Q ss_pred ccCCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccCCCCHHHHHHHHHc-CCeEEEecCCCCCCccccC
Q 010685 280 LGKSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKE-RLEVFASNFANDIPISFNY 358 (504)
Q Consensus 280 l~~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~-Gl~V~~wTv~n~~~~~~~y 358 (504)
++. . .++...+.++...|..-.++|- ..+.+++..++. +.+|.+-++=++
T Consensus 111 iDS--------~-------al~~~~~~i~~~~PD~iEiLPG-------i~p~iI~~i~~~~~~PiIaGGlI~~------- 161 (192)
T 3kts_A 111 IDS--------S-------AYNKGVALIQKVQPDCIELLPG-------IIPEQVQKMTQKLHIPVIAGGLIET------- 161 (192)
T ss_dssp CSH--------H-------HHHHHHHHHHHHCCSEEEEECT-------TCHHHHHHHHHHHCCCEEEESSCCS-------
T ss_pred EEc--------c-------hHHHHHHHHhhcCCCEEEECCc-------hhHHHHHHHHHhcCCCEEEECCcCC-------
Confidence 321 1 1222222333344443334442 135788887765 899999988543
Q ss_pred CCChHHHHHHHhhcCCCcccccccCCCC
Q 010685 359 SYDPLTEYLSFIDNGDFSVDGVLSDFPL 386 (504)
Q Consensus 359 ~~D~~~e~~~~i~~G~~gVDGIiTD~P~ 386 (504)
.+++...++.| +++|.|-.+.
T Consensus 162 ----~edv~~al~aG---A~aVsTs~~~ 182 (192)
T 3kts_A 162 ----SEQVNQVIASG---AIAVTTSNKH 182 (192)
T ss_dssp ----HHHHHHHHTTT---EEEEEECCGG
T ss_pred ----HHHHHHHHHcC---CeEEEeCCHH
Confidence 46777888766 9999997664
No 45
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=63.59 E-value=23 Score=34.90 Aligned_cols=98 Identities=13% Similarity=0.005 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh---HHH-HHHHhhcCCCcccccccCCC-------CChHHHHHHhhhc
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP---LTE-YLSFIDNGDFSVDGVLSDFP-------LTPSAAVDCFAHL 398 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~---~~e-~~~~i~~G~~gVDGIiTD~P-------~~~~~~l~~~~~~ 398 (504)
..+++.+++.|+++.+|.+.......- ..|| ..+ ++.+. ++|+|-|-+..| +.+.++.+.....
T Consensus 145 ~~v~~~~~~~G~p~lv~~~~~g~~v~~--~~~~~~~v~~aa~~a~---~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~ 219 (304)
T 1to3_A 145 KEFNELCHSNGLLSIIEPVVRPPRCGD--KFDREQAIIDAAKELG---DSGADLYKVEMPLYGKGARSDLLTASQRLNGH 219 (304)
T ss_dssp HHHHHHHHTTTCEEEEEEEECCCSSCS--CCCHHHHHHHHHHHHT---TSSCSEEEECCGGGGCSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCcEEEEEECCCCcccc--CCChhHHHHHHHHHHH---HcCCCEEEeCCCcCCCCCHHHHHHHHHhcccc
Confidence 468889999999999998643211110 1234 333 44444 456999988887 2333333322210
Q ss_pred CCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010685 399 GKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 399 ~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
-..|.|+.=-|. -++..+..++.|++.|++++=+
T Consensus 220 ------~~~P~Vv~aGG~---~~~~~~~~~~~a~~aGa~Gv~v 253 (304)
T 1to3_A 220 ------INMPWVILSSGV---DEKLFPRAVRVAMEAGASGFLA 253 (304)
T ss_dssp ------CCSCEEECCTTS---CTTTHHHHHHHHHHTTCCEEEE
T ss_pred ------CCCCeEEEecCC---CHHHHHHHHHHHHHcCCeEEEE
Confidence 124634444333 4777788899999999877644
No 46
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=61.08 E-value=20 Score=34.06 Aligned_cols=101 Identities=10% Similarity=-0.000 Sum_probs=56.3
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHH-HHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccce
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY-LSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSANL 408 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~-~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~~ 408 (504)
..+++.+|+.|++|.+++...........+.+...+. ..+.+.| +|.|.+.+|.. .+.++.+... -..|
T Consensus 135 ~~v~~~~~~~g~~viv~~~~~G~~l~~~~~~~~~~~~a~~a~~~G---ad~i~~~~~~~-~~~l~~i~~~------~~ip 204 (273)
T 2qjg_A 135 GMIAETCEYWGMPLIAMMYPRGKHIQNERDPELVAHAARLGAELG---ADIVKTSYTGD-IDSFRDVVKG------CPAP 204 (273)
T ss_dssp HHHHHHHHHHTCCEEEEEEECSTTCSCTTCHHHHHHHHHHHHHTT---CSEEEECCCSS-HHHHHHHHHH------CSSC
T ss_pred HHHHHHHHHcCCCEEEEeCCCCcccCCCCCHhHHHHHHHHHHHcC---CCEEEECCCCC-HHHHHHHHHh------CCCC
Confidence 4578889999999998863111000000111122333 4555554 99999997643 3344444321 1123
Q ss_pred eEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010685 409 LVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 409 ~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
++++-|-...-+|.-+..+..+++.|++++-+
T Consensus 205 -vva~GGi~~~~~~~~~~~~~~~~~~Ga~gv~v 236 (273)
T 2qjg_A 205 -VVVAGGPKTNTDEEFLQMIKDAMEAGAAGVAV 236 (273)
T ss_dssp -EEEECCSCCSSHHHHHHHHHHHHHHTCSEEEC
T ss_pred -EEEEeCCCCCCHHHHHHHHHHHHHcCCcEEEe
Confidence 67775544333444555577888999987755
No 47
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=59.60 E-value=27 Score=34.35 Aligned_cols=92 Identities=12% Similarity=-0.058 Sum_probs=53.9
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHH---HHHHHhhcCCCcccccccCCCC-ChHHHHHHhhhcCCCcccc
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLT---EYLSFIDNGDFSVDGVLSDFPL-TPSAAVDCFAHLGKNASKS 405 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~---e~~~~i~~G~~gVDGIiTD~P~-~~~~~l~~~~~~~~~~~~~ 405 (504)
..+++.+|+.|+.|.+|+...... ..|+.. ..+...+ +|+|.|-|.+|. .+.++.+ . -
T Consensus 161 ~~v~~~a~~~GlpvIie~~~G~~~-----~~d~e~i~~aariA~e---lGAD~VKt~~t~e~~~~vv~----~------~ 222 (295)
T 3glc_A 161 IQLVDAGMKVGMPTMAVTGVGKDM-----VRDQRYFSLATRIAAE---MGAQIIKTYYVEKGFERIVA----G------C 222 (295)
T ss_dssp HHHHHHHHTTTCCEEEEECC---------CCSHHHHHHHHHHHHH---TTCSEEEEECCTTTHHHHHH----T------C
T ss_pred HHHHHHHHHcCCEEEEECCCCCcc-----CCCHHHHHHHHHHHHH---hCCCEEEeCCCHHHHHHHHH----h------C
Confidence 368889999999999998542210 124421 2233333 459999999983 3333321 1 1
Q ss_pred cceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010685 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 406 ~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
..|++ + -|+....++-.+...+.|++.||+++-+
T Consensus 223 ~vPVv-~-~GG~~~~~~~~l~~v~~ai~aGA~Gv~v 256 (295)
T 3glc_A 223 PVPIV-I-AGGKKLPEREALEMCWQAIDQGASGVDM 256 (295)
T ss_dssp SSCEE-E-ECCSCCCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcEE-E-EECCCCCHHHHHHHHHHHHHhCCeEEEe
Confidence 23544 4 3433323566677778889999976543
No 48
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=56.80 E-value=11 Score=37.36 Aligned_cols=97 Identities=12% Similarity=0.117 Sum_probs=59.8
Q ss_pred HHHHHHHHHcCCeEEEecCCCCC-CccccCCCChHHH---HHHHhhcCCCccc----ccccCCCCChHHHHHHhhhcCCC
Q 010685 330 TTIVLDAHKERLEVFASNFANDI-PISFNYSYDPLTE---YLSFIDNGDFSVD----GVLSDFPLTPSAAVDCFAHLGKN 401 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~-~~~~~y~~D~~~e---~~~~i~~G~~gVD----GIiTD~P~~~~~~l~~~~~~~~~ 401 (504)
..+++.|++.|+.+.+|.+.-.. .....-..||..- .+-.. ++|+| .|=|.+|+.+.++.+.
T Consensus 166 a~vv~ea~~~GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aaRiAa---ELGADs~~tivK~~y~e~f~~Vv~a------- 235 (307)
T 3fok_A 166 AHAVNEAAAAQLPIMLEPFMSNWVNGKVVNDLSTDAVIQSVAIAA---GLGNDSSYTWMKLPVVEEMERVMES------- 235 (307)
T ss_dssp HHHHHHHHHTTCCEEEEEEEEEEETTEEEECCSHHHHHHHHHHHH---TCSSCCSSEEEEEECCTTHHHHGGG-------
T ss_pred HHHHHHHHHcCCcEEEEeeccccCCCCcCCCCCHHHHHHHHHHHH---HhCCCcCCCEEEeCCcHHHHHHHHh-------
Confidence 46889999999999998432100 0000001344222 12222 56799 9999999655444421
Q ss_pred cccccceeEeeCCCCCC-CCCCchHHHHHHHHH-cCCCEEEe
Q 010685 402 ASKSANLLVISKNGASG-DYPSCTNLAYQKAIS-DGVDFIDC 441 (504)
Q Consensus 402 ~~~~~~~~iiaHRG~~~-~~penT~~a~~~a~~-~g~~~iE~ 441 (504)
-..|.+++ |++. .-++.++.-.+.|++ .|+.++-+
T Consensus 236 ---~~vPVVia--GG~k~~~~~e~L~~v~~A~~~aGa~Gv~v 272 (307)
T 3fok_A 236 ---TTMPTLLL--GGEGGNDPDATFASWEHALTLPGVRGLTV 272 (307)
T ss_dssp ---CSSCEEEE--CCSCC--CHHHHHHHHHHTTSTTEEEEEE
T ss_pred ---CCCCEEEe--CCCCCCCHHHHHHHHHHHHHhCCCeEEee
Confidence 13678887 5554 468899999999999 69877654
No 49
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=52.88 E-value=59 Score=29.31 Aligned_cols=86 Identities=13% Similarity=0.103 Sum_probs=50.9
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCC--------ChHHHHHHhhhcCCC
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPL--------TPSAAVDCFAHLGKN 401 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~--------~~~~~l~~~~~~~~~ 401 (504)
..+++.+++.|+++.+-.++.+ ++.+++..+.+.| +|.|.++ |. ...+.++.+.+..+
T Consensus 93 ~~~~~~~~~~g~~~~v~~~~~~---------t~~~~~~~~~~~g---~d~i~v~-~g~~g~~~~~~~~~~i~~l~~~~~- 158 (211)
T 3f4w_A 93 QSCIRAAKEAGKQVVVDMICVD---------DLPARVRLLEEAG---ADMLAVH-TGTDQQAAGRKPIDDLITMLKVRR- 158 (211)
T ss_dssp HHHHHHHHHHTCEEEEECTTCS---------SHHHHHHHHHHHT---CCEEEEE-CCHHHHHTTCCSHHHHHHHHHHCS-
T ss_pred HHHHHHHHHcCCeEEEEecCCC---------CHHHHHHHHHHcC---CCEEEEc-CCCcccccCCCCHHHHHHHHHHcC-
Confidence 5689999999999987433321 4556777888766 9998876 32 22334444433211
Q ss_pred cccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010685 402 ASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 402 ~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
..|+++ +.|..|||-. .+++.|||++-+
T Consensus 159 ----~~~i~~----~gGI~~~~~~----~~~~~Gad~vvv 186 (211)
T 3f4w_A 159 ----KARIAV----AGGISSQTVK----DYALLGPDVVIV 186 (211)
T ss_dssp ----SCEEEE----ESSCCTTTHH----HHHTTCCSEEEE
T ss_pred ----CCcEEE----ECCCCHHHHH----HHHHcCCCEEEE
Confidence 234333 2344466643 556779877654
No 50
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=50.19 E-value=1.5e+02 Score=30.09 Aligned_cols=21 Identities=5% Similarity=-0.015 Sum_probs=17.5
Q ss_pred CCHHHHHHHHHcCCeEEEecC
Q 010685 328 PHTTIVLDAHKERLEVFASNF 348 (504)
Q Consensus 328 ~~~~lV~~ahk~Gl~V~~wTv 348 (504)
.+..+++.+-+.|++|..-|=
T Consensus 237 ~n~~LL~~~a~~gkPVilk~G 257 (385)
T 3nvt_A 237 QNFELLKAAGRVDKPILLKRG 257 (385)
T ss_dssp TCHHHHHHHHTSSSCEEEECC
T ss_pred cCHHHHHHHHccCCcEEEecC
Confidence 457899999999999998864
No 51
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=46.77 E-value=44 Score=32.59 Aligned_cols=98 Identities=14% Similarity=0.138 Sum_probs=56.4
Q ss_pred HHHHHHHHHcCCeEEEe---cCCCCCCccccCCCChHHHHHH----HhhcCCCccccc-ccC-----CCCChHHHHHHhh
Q 010685 330 TTIVLDAHKERLEVFAS---NFANDIPISFNYSYDPLTEYLS----FIDNGDFSVDGV-LSD-----FPLTPSAAVDCFA 396 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~w---Tv~n~~~~~~~y~~D~~~e~~~----~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~ 396 (504)
...|+.||+.|++|-+. ++..+.. -..|| +.+.+ +.+.| +|.| +.| .|....+.++.+.
T Consensus 127 ~~~v~~a~~~G~~V~~~l~~~~~~e~~----~~~~~-~~~~~~~~~~~~~G---~d~i~l~DT~G~~~P~~~~~lv~~l~ 198 (302)
T 2ftp_A 127 VPVLEAARQHQVRVRGYISCVLGCPYD----GDVDP-RQVAWVARELQQMG---CYEVSLGDTIGVGTAGATRRLIEAVA 198 (302)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCBTTT----BCCCH-HHHHHHHHHHHHTT---CSEEEEEESSSCCCHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCeEEEEEEEEeeCCcC----CCCCH-HHHHHHHHHHHHcC---CCEEEEeCCCCCcCHHHHHHHHHHHH
Confidence 56899999999998532 2222211 11344 23333 33444 8865 223 4666666666554
Q ss_pred hcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010685 397 HLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 397 ~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
+. .+ ....-+-+|.+ +|.+..|++ +|++.|++.|++-|.
T Consensus 199 ~~---~~-~~~l~~H~Hn~-~Gla~An~l----aAv~aGa~~vd~tv~ 237 (302)
T 2ftp_A 199 SE---VP-RERLAGHFHDT-YGQALANIY----ASLLEGIAVFDSSVA 237 (302)
T ss_dssp TT---SC-GGGEEEEEBCT-TSCHHHHHH----HHHHTTCCEEEEBGG
T ss_pred Hh---CC-CCeEEEEeCCC-ccHHHHHHH----HHHHhCCCEEEeccc
Confidence 32 11 12233567776 567777777 566789999887665
No 52
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=46.57 E-value=1.9e+02 Score=27.11 Aligned_cols=170 Identities=7% Similarity=0.080 Sum_probs=82.0
Q ss_pred cCCHHHHHHHH---HhcCCCCCcEEEEeccCC--ccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCccccCCC
Q 010685 255 SPEVNFLRSIA---ARFRPSMTKLVFRFLGKS--EIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLYLLP 328 (504)
Q Consensus 255 Sfd~~~L~~l~---~~~~~~~~~lv~~ll~~~--~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~~~~l~~ 328 (504)
++++..++.++ +.. .+|+.. ++.+. ++..+ ...+.-|...+..++.. ++|+... .+-+ ++.-+...
T Consensus 37 TPS~g~i~~~~~~~~~~---~ipV~v-MIRPR~GdF~Ys-~~E~~~M~~Di~~~~~~GadGvV~G--~Lt~-dg~iD~~~ 108 (224)
T 2bdq_A 37 TPSYGVIKEANQYLHEK---GISVAV-MIRPRGGNFVYN-DLELRIMEEDILRAVELESDALVLG--ILTS-NNHIDTEA 108 (224)
T ss_dssp CCCHHHHHHHHHHHHHT---TCEEEE-ECCSSSSCSCCC-HHHHHHHHHHHHHHHHTTCSEEEEC--CBCT-TSSBCHHH
T ss_pred CCCHHHHHHHHHhhhhc---CCceEE-EECCCCCCCcCC-HHHHHHHHHHHHHHHHcCCCEEEEe--eECC-CCCcCHHH
Confidence 47888888887 654 456653 44332 12111 11222233344444443 4554332 1111 11111111
Q ss_pred CHHHHHHHHHcCCeEEEecCCCCCCccccCC--CChHHHHHHHhhcCCCcccccccC----C--CCChHHHHHHhhhcCC
Q 010685 329 HTTIVLDAHKERLEVFASNFANDIPISFNYS--YDPLTEYLSFIDNGDFSVDGVLSD----F--PLTPSAAVDCFAHLGK 400 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~--~D~~~e~~~~i~~G~~gVDGIiTD----~--P~~~~~~l~~~~~~~~ 400 (504)
...+++.++ |++ |||... ||.. .||.+.+.++++.| |+-|.|- . ...-...++.+...
T Consensus 109 ~~~Li~~a~--~~~---vTFHRA----FD~~~~~d~~~ale~L~~lG---v~rILTSG~~~~~~a~~g~~~L~~Lv~~-- 174 (224)
T 2bdq_A 109 IEQLLPATQ--GLP---LVFHMA----FDVIPKSDQKKSIDQLVALG---FTRILLHGSSNGEPIIENIKHIKALVEY-- 174 (224)
T ss_dssp HHHHHHHHT--TCC---EEECGG----GGGSCTTTHHHHHHHHHHTT---CCEEEECSCSSCCCGGGGHHHHHHHHHH--
T ss_pred HHHHHHHhC--CCe---EEEECc----hhccCCcCHHHHHHHHHHcC---CCEEECCCCCCCCcHHHHHHHHHHHHHh--
Confidence 234555554 655 777643 4444 68999999999876 9999996 2 22234445444331
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeecCCeEEEec
Q 010685 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSKDGVPFCLS 455 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v~~H 455 (504)
...++.|++ ++|..++|-.. +.+ +.|++.+-.---..+.|.|.-.|
T Consensus 175 ---a~~ri~Im~---GgGV~~~Ni~~-l~~--~tGv~e~H~s~i~~~~~~~~~~~ 220 (224)
T 2bdq_A 175 ---ANNRIEIMV---GGGVTAENYQY-ICQ--ETGVKQAHGTRITQMAGDPLEHH 220 (224)
T ss_dssp ---HTTSSEEEE---CSSCCTTTHHH-HHH--HHTCCEEEETTCC----------
T ss_pred ---hCCCeEEEe---CCCCCHHHHHH-HHH--hhCCCEEccccccCCCCCcchhc
Confidence 122455665 46788888654 322 24777666544444455554433
No 53
>3h4x_A Phosphatidylinositol-specific phospholipase C1; PI-PLC, Ca2+-dependent, catalytic TIM barrel, disulfide-LINK loop, hydrolase; 1.23A {Streptomyces antibioticus} PDB: 3h4w_A
Probab=41.81 E-value=22 Score=35.43 Aligned_cols=51 Identities=10% Similarity=-0.032 Sum_probs=38.0
Q ss_pred cceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeeeeec-CCeEEEecCcCcc
Q 010685 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQMSK-DGVPFCLSFINLI 460 (504)
Q Consensus 406 ~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~~t~-Dg~~v~~Hd~~l~ 460 (504)
....+-+|.-+-... ...+.+|++.|+..||+||+... .|.+.|+|...+.
T Consensus 30 ~~T~~g~HNSY~~g~----~~~i~~qLd~GVR~LELDIw~n~~~g~~~V~Hg~~l~ 81 (339)
T 3h4x_A 30 TSTSVGVHNAYEKEK----YRYFADALDSGAALLELDLWSNALGRSWRVSHSNPLG 81 (339)
T ss_dssp SEEEEEETTTTCTTT----CSSHHHHHTTCCSEEEEEEESSSSSSSCEECSSSCSS
T ss_pred cceEeeccccccccC----cccHHHHHHhCCCEEEEEeecCCCCCCeEEeCCCccc
Confidence 345678887644221 35678999999999999999774 5679999987654
No 54
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=35.74 E-value=52 Score=31.94 Aligned_cols=99 Identities=20% Similarity=0.183 Sum_probs=56.0
Q ss_pred HHHHHHHHHcCCeEEEec---CCCCCCccccCCCCh--HHH-HHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhh
Q 010685 330 TTIVLDAHKERLEVFASN---FANDIPISFNYSYDP--LTE-YLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAH 397 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wT---v~n~~~~~~~y~~D~--~~e-~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~ 397 (504)
...++.+++.|++|.+.. +..+... ..|+ ..+ +..+.+.| +|.| +.| .|..+.+.++.+.+
T Consensus 124 ~~~i~~a~~~G~~v~~~l~~~~~~~~~~----~~~~~~~~~~~~~~~~~G---a~~i~l~DT~G~~~P~~~~~lv~~l~~ 196 (298)
T 2cw6_A 124 DAILKAAQSANISVRGYVSCALGCPYEG----KISPAKVAEVTKKFYSMG---CYEISLGDTIGVGTPGIMKDMLSAVMQ 196 (298)
T ss_dssp HHHHHHHHHTTCEEEEEEETTTCBTTTB----SCCHHHHHHHHHHHHHTT---CSEEEEEETTSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEEEEEeeCCcCC----CCCHHHHHHHHHHHHHcC---CCEEEecCCCCCcCHHHHHHHHHHHHH
Confidence 457999999999986542 3322110 1233 222 34444444 8876 444 46666666666654
Q ss_pred cCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010685 398 LGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 398 ~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
.-+ ....-+-+|.- .|.+-.|++ .|++.|++.|++-|.
T Consensus 197 ~~~----~~~i~~H~Hn~-~Gla~An~l----aA~~aGa~~vd~tv~ 234 (298)
T 2cw6_A 197 EVP----LAALAVHCHDT-YGQALANTL----MALQMGVSVVDSSVA 234 (298)
T ss_dssp HSC----GGGEEEEEBCT-TSCHHHHHH----HHHHTTCCEEEEBTT
T ss_pred hCC----CCeEEEEECCC-CchHHHHHH----HHHHhCCCEEEeecc
Confidence 321 11233566653 355566666 556789999887543
No 55
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=32.21 E-value=1.4e+02 Score=28.36 Aligned_cols=99 Identities=13% Similarity=0.070 Sum_probs=53.2
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHH----HHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccc
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEY----LSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKS 405 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~----~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~ 405 (504)
..+++.+++.|+++..|...... +..-..++ ++. +...+. |+|.|-|-+|... +.++.+... . .
T Consensus 128 ~~v~~~~~~~~~~vIi~~~~~G~--~~~~~~s~-~~i~~a~~~a~~~---GAD~vkt~~~~~~-e~~~~~~~~----~-~ 195 (263)
T 1w8s_A 128 ARIKRDAVKFDLPLVVESFPRGG--KVVNETAP-EIVAYAARIALEL---GADAMKIKYTGDP-KTFSWAVKV----A-G 195 (263)
T ss_dssp HHHHHHHHHHTCCEEEEECCCST--TCCCTTCH-HHHHHHHHHHHHH---TCSEEEEECCSSH-HHHHHHHHH----T-T
T ss_pred HHHHHHHHHcCCeEEEEeeCCCC--ccccCCCH-HHHHHHHHHHHHc---CCCEEEEcCCCCH-HHHHHHHHh----C-C
Confidence 45777888999999999654211 11000122 222 233444 5999999998543 233333221 0 1
Q ss_pred cceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010685 406 ANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 406 ~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
..| |++--|-+..-+|-.+.-...+++.||+++-+
T Consensus 196 ~~p-V~asGGi~~~~~~~~l~~i~~~~~aGA~Gvsv 230 (263)
T 1w8s_A 196 KVP-VLMSGGPKTKTEEDFLKQVEGVLEAGALGIAV 230 (263)
T ss_dssp TSC-EEEECCSCCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCe-EEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEE
Confidence 114 44443443333455555666777899976643
No 56
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=29.41 E-value=1.3e+02 Score=28.81 Aligned_cols=154 Identities=14% Similarity=0.241 Sum_probs=81.8
Q ss_pred cCCHHHHHHHHHhcCCCCCcEEEEeccCC--ccCCCccccHHHHHhhHHHHHhh-hcccccCCccccccCccccCCCCHH
Q 010685 255 SPEVNFLRSIAARFRPSMTKLVFRFLGKS--EIEPTTNQTYGSLLKNLTFIKTF-ASGILVPKDYIWPVDESLYLLPHTT 331 (504)
Q Consensus 255 Sfd~~~L~~l~~~~~~~~~~lv~~ll~~~--~~~~~~~~~y~~l~~~l~~i~~~-a~gi~~~~~~i~~~~~~~~l~~~~~ 331 (504)
++++..++.+++.. .+|+.. ++.+. ++.. +...+.-|...+..++.. ++|+... .+-+ ++.-+......
T Consensus 37 TPS~g~i~~~~~~~---~ipv~v-MIRPR~GdF~Y-s~~E~~~M~~Di~~~~~~GadGvV~G--~Lt~-dg~iD~~~~~~ 108 (256)
T 1twd_A 37 TPSLGVLKSVRQRV---TIPVHP-IIRPRGGDFCY-SDGEFAAILEDVRTVRELGFPGLVTG--VLDV-DGNVDMPRMEK 108 (256)
T ss_dssp CCCHHHHHHHHHHC---CSCEEE-BCCSSSSCSCC-CHHHHHHHHHHHHHHHHTTCSEEEEC--CBCT-TSSBCHHHHHH
T ss_pred CCCHHHHHHHHHHc---CCceEE-EECCCCCCCcC-CHHHHHHHHHHHHHHHHcCCCEEEEe--eECC-CCCcCHHHHHH
Confidence 47889998888775 466653 44332 1211 112222233344444443 4554432 1111 11111111234
Q ss_pred HHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccC----CCCChHHHHHHhhhcCCCcccccc
Q 010685 332 IVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSD----FPLTPSAAVDCFAHLGKNASKSAN 407 (504)
Q Consensus 332 lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD----~P~~~~~~l~~~~~~~~~~~~~~~ 407 (504)
+++.++ |++ |||... ||...||.+.+.++++.| |+-|.|- ....-...++.+... . . +
T Consensus 109 Li~~a~--~~~---vTFHRA----fD~~~d~~~ale~L~~lG---~~rILTSG~~~~a~~g~~~L~~Lv~~---a--~-~ 170 (256)
T 1twd_A 109 IMAAAG--PLA---VTFHRA----FDMCANPLYTLNNLAELG---IARVLTSGQKSDALQGLSKIMELIAH---R--D-A 170 (256)
T ss_dssp HHHHHT--TSE---EEECGG----GGGCSCHHHHHHHHHHHT---CCEEEECTTSSSTTTTHHHHHHHHTS---S--S-C
T ss_pred HHHHhC--CCc---EEEECc----hhccCCHHHHHHHHHHcC---CCEEECCCCCCCHHHHHHHHHHHHHh---h--C-C
Confidence 555554 664 788653 444568999999999876 9999996 223334455555432 1 1 4
Q ss_pred eeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEe
Q 010685 408 LLVISKNGASGDYPSCTNLAYQKAISDGVDFIDC 441 (504)
Q Consensus 408 ~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~ 441 (504)
+.|++ ++|..++|-.. +. +.|++.+-+
T Consensus 171 i~Im~---GgGv~~~Ni~~-l~---~tGv~e~H~ 197 (256)
T 1twd_A 171 PIIMA---GAGVRAENLHH-FL---DAGVLEVHS 197 (256)
T ss_dssp CEEEE---ESSCCTTTHHH-HH---HHTCSEEEE
T ss_pred cEEEe---cCCcCHHHHHH-HH---HcCCCeEeE
Confidence 55665 46788888654 32 567765543
No 57
>1vkf_A Glycerol uptake operon antiterminator-related Pro; struc genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: CIT; 1.65A {Thermotoga maritima} SCOP: c.1.29.1
Probab=29.30 E-value=1.4e+02 Score=27.12 Aligned_cols=138 Identities=11% Similarity=0.050 Sum_probs=78.8
Q ss_pred ccCCHHHHHHHhCC--CceEEeeccchhhhccchHHHHHHHHHHHhcCCceEecCCHHHHHHHHHhcCCCCCcEEEEecc
Q 010685 204 QILTVQDMARQIKP--PGLWLNIQHDAFYAQHNLSMRSFVLSVSRSVVVNYISSPEVNFLRSIAARFRPSMTKLVFRFLG 281 (504)
Q Consensus 204 ~IpTLeEvL~~~k~--~~l~iEIK~~~~~~~~~~~~~~~v~~~l~~~g~~~isSfd~~~L~~l~~~~~~~~~~lv~~ll~ 281 (504)
.+-.|+++.+.+++ ..+.|.+..-.-... .+.-++.++..+...|-|-....++..++.. -.-.+.+| +++
T Consensus 41 ~I~~L~~iv~~ik~~gK~vivh~DlI~GLs~-----d~~ai~fL~~~~pdGIIsTk~~~i~~Akk~G-L~tIqR~F-liD 113 (188)
T 1vkf_A 41 DILNLKFHLKILKDRGKTVFVDMDFVNGLGE-----GEEAILFVKKAGADGIITIKPKNYVVAKKNG-IPAVLRFF-ALD 113 (188)
T ss_dssp ETTTHHHHHHHHHHTTCEEEEEGGGEETCCS-----SHHHHHHHHHHTCSEEEESCHHHHHHHHHTT-CCEEEEEE-CCS
T ss_pred cHHHHHHHHHHHHHCCCeEEEecCcccccCC-----CHHHHHHHHhcCCCEEEcCcHHHHHHHHHcC-CEEeeEEE-EEE
Confidence 45679999998853 446666543211111 1223444466678777788999999888763 22355555 332
Q ss_pred CCccCCCccccHHHHHhhHHHHHhhhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCCccccCCCC
Q 010685 282 KSEIEPTTNQTYGSLLKNLTFIKTFASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIPISFNYSYD 361 (504)
Q Consensus 282 ~~~~~~~~~~~y~~l~~~l~~i~~~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D 361 (504)
. .. +...++.+.. ..|..-.++|. . ..+.+++.. .+..+.+-++=++
T Consensus 114 s--------~a---l~~~~~~I~~----~kPD~iEiLPg-----~-v~p~~I~~v--~~~PiIaGGlI~t---------- 160 (188)
T 1vkf_A 114 S--------KA---VERGIEQIET----LGVDVVEVLPG-----A-VAPKVARKI--PGRTVIAAGLVET---------- 160 (188)
T ss_dssp H--------HH---HHHHHHHHHH----HTCSEEEEESG-----G-GHHHHHTTS--TTSEEEEESCCCS----------
T ss_pred e--------HH---Hhhhhhhccc----cCCCeEeecCC-----C-chHHHHHHh--cCCCEEEECCcCC----------
Confidence 1 11 1112333322 23333233332 0 025788877 7889999988543
Q ss_pred hHHHHHHHhhcCCCcccccccCCCC
Q 010685 362 PLTEYLSFIDNGDFSVDGVLSDFPL 386 (504)
Q Consensus 362 ~~~e~~~~i~~G~~gVDGIiTD~P~ 386 (504)
.++... ++.| +|+|.|=.++
T Consensus 161 -~edv~~-l~aG---A~aIsTs~~~ 180 (188)
T 1vkf_A 161 -EEEARE-ILKH---VSAISTSSRI 180 (188)
T ss_dssp -HHHHHH-HTTT---SSEEEECCHH
T ss_pred -HHHHHH-HHCC---CeEEEeCCHH
Confidence 355666 7665 9999997654
No 58
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=29.03 E-value=81 Score=30.87 Aligned_cols=99 Identities=14% Similarity=0.139 Sum_probs=55.4
Q ss_pred HHHHHHHHHcCCeEEEe---cCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhh
Q 010685 330 TTIVLDAHKERLEVFAS---NFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAH 397 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~w---Tv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~ 397 (504)
...++.+++.|++|.+. ++..+. .-..|| .+.++.+.+.| +|.| +.| .|..+.+.++.+.+
T Consensus 125 ~~~v~~ak~~G~~v~~~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~G---a~~i~l~DT~G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 125 KQVNNDAQKANLTTRAYLSTVFGCPY----EKDVPIEQVIRLSEALFEFG---ISELSLGDTIGAANPAQVETVLEALLA 197 (307)
T ss_dssp HHHHHHHHHTTCEEEEEEECTTCBTT----TBCCCHHHHHHHHHHHHHHT---CSCEEEECSSCCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHCCCEEEEEEEEEecCCc----CCCCCHHHHHHHHHHHHhcC---CCEEEEcCCCCCcCHHHHHHHHHHHHH
Confidence 45799999999998643 232221 111233 22234445554 8865 344 46666666665544
Q ss_pred cCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010685 398 LGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 398 ~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
.-+ ....-+-+|.- .|.+..|+++ |++.||+.|++-|.
T Consensus 198 ~~~----~~~l~~H~Hnd-~Gla~AN~la----Av~aGa~~vd~tv~ 235 (307)
T 1ydo_A 198 RFP----ANQIALHFHDT-RGTALANMVT----ALQMGITVFDGSAG 235 (307)
T ss_dssp TSC----GGGEEEECBGG-GSCHHHHHHH----HHHHTCCEEEEBGG
T ss_pred hCC----CCeEEEEECCC-CchHHHHHHH----HHHhCCCEEEEccc
Confidence 211 11223445543 3666677774 56679999987765
No 59
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=28.97 E-value=1.4e+02 Score=29.15 Aligned_cols=87 Identities=15% Similarity=0.256 Sum_probs=53.1
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHH---------------HHHH
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSA---------------AVDC 394 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~---------------~l~~ 394 (504)
-++|++||+.||...+++++. ++...+.+.| +|.|+..-|-+... +++.
T Consensus 153 ve~I~~A~~~gL~Ti~~v~~~-------------eeA~amA~ag---pDiI~~h~glT~gglIG~~~avs~~~~~e~i~~ 216 (286)
T 2p10_A 153 VEMIAEAHKLDLLTTPYVFSP-------------EDAVAMAKAG---ADILVCHMGLTTGGAIGARSGKSMDDCVSLINE 216 (286)
T ss_dssp HHHHHHHHHTTCEECCEECSH-------------HHHHHHHHHT---CSEEEEECSCC---------CCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEecCCH-------------HHHHHHHHcC---CCEEEECCCCCCCCcccCCCcccHHHhHHHHHH
Confidence 468999999999999998763 4555666554 99999999933222 1111
Q ss_pred hhhcCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHc--CCCEE
Q 010685 395 FAHLGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISD--GVDFI 439 (504)
Q Consensus 395 ~~~~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~--g~~~i 439 (504)
+...- ..-.+..+++.|-| |=.|-.=.+.+++. |++++
T Consensus 217 i~~a~--~~vnpdvivLc~gG-----pIstpeDv~~~l~~t~G~~G~ 256 (286)
T 2p10_A 217 CIEAA--RTIRDDIIILSHGG-----PIANPEDARFILDSCQGCHGF 256 (286)
T ss_dssp HHHHH--HHHCSCCEEEEEST-----TCCSHHHHHHHHHHCTTCCEE
T ss_pred HHHHH--HHhCCCcEEEecCC-----CCCCHHHHHHHHhcCCCccEE
Confidence 11100 01123467888865 33444555666776 77665
No 60
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=28.59 E-value=59 Score=32.26 Aligned_cols=99 Identities=15% Similarity=0.117 Sum_probs=56.6
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcCC
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLGK 400 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~~ 400 (504)
...++.+++.|++|.+..-. . .+....|+ .+..+.+.+. |+|.| +-| .|..+.+.++.+.+.-+
T Consensus 140 ~~~v~~ak~~G~~v~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~---Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p 212 (337)
T 3ble_A 140 SFVIEYAIKSGLKINVYLED--W--SNGFRNSPDYVKSLVEHLSKE---HIERIFLPDTLGVLSPEETFQGVDSLIQKYP 212 (337)
T ss_dssp HHHHHHHHHTTCEEEEEEET--H--HHHHHHCHHHHHHHHHHHHTS---CCSEEEEECTTCCCCHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHCCCEEEEEEEE--C--CCCCcCCHHHHHHHHHHHHHc---CCCEEEEecCCCCcCHHHHHHHHHHHHHhcC
Confidence 45789999999998866432 0 00001123 2234445544 59887 555 46666666666554311
Q ss_pred CcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010685 401 NASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 401 ~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
....-+-+|.- .|.+..|++ .|++.||+.|++-|.
T Consensus 213 ----~~~i~~H~Hnd-~GlA~AN~l----aAv~aGa~~vd~tv~ 247 (337)
T 3ble_A 213 ----DIHFEFHGHND-YDLSVANSL----QAIRAGVKGLHASIN 247 (337)
T ss_dssp ----TSCEEEECBCT-TSCHHHHHH----HHHHTTCSEEEEBGG
T ss_pred ----CCeEEEEecCC-cchHHHHHH----HHHHhCCCEEEEecc
Confidence 11223445543 355666666 556789999987765
No 61
>3o27_A Putative uncharacterized protein; swapped-hairpin fold, transcription factor, DNA binding PROT; 2.80A {Sulfolobus islandicus}
Probab=26.62 E-value=38 Score=25.66 Aligned_cols=44 Identities=18% Similarity=0.019 Sum_probs=25.3
Q ss_pred EEeCCCCCC--CCchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEEEe
Q 010685 95 VARGGFSGI--FPDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGICF 140 (504)
Q Consensus 95 iaHRG~~~~--~pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~Vv~ 140 (504)
-+|+|+.|. |==|=-+.+..|+...-.| .+|.-|- +|||.+|++
T Consensus 14 ~~~kgg~g~etyYInIPaeI~kaLgIk~gD-~fel~ve-~kdgeIvLc 59 (68)
T 3o27_A 14 RAYKGGSGHTTFYLLIPKDIAEALDIKPDD-TFILNME-QKDGDIVLS 59 (68)
T ss_dssp EEC-----CCCEEEEECHHHHHHTTCCTTC-CEEEEEE-EETTEEEEE
T ss_pred eeeeCCCCceEEEEeCcHHHHHHhCCCCCC-EEEEEEe-cCCCeEEEE
Confidence 469998753 3334447788888766544 6777666 999976553
No 62
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=26.49 E-value=4.2e+02 Score=25.07 Aligned_cols=20 Identities=10% Similarity=0.092 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHcCCeEEEec
Q 010685 328 PHTTIVLDAHKERLEVFASN 347 (504)
Q Consensus 328 ~~~~lV~~ahk~Gl~V~~wT 347 (504)
.+..+++.+-+.|++|..-+
T Consensus 118 ~n~~ll~~~a~~~kPV~lk~ 137 (262)
T 1zco_A 118 QNFELLKEVGKVENPVLLKR 137 (262)
T ss_dssp TCHHHHHHHTTSSSCEEEEC
T ss_pred cCHHHHHHHHhcCCcEEEec
Confidence 35677888888888888864
No 63
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=25.63 E-value=95 Score=29.88 Aligned_cols=98 Identities=17% Similarity=0.191 Sum_probs=54.4
Q ss_pred HHHHHHHHHcCCeEEE--e-cCCCCCCccccCCCChH--HH-HHHHhhcCCCcccccc-cC-----CCCChHHHHHHhhh
Q 010685 330 TTIVLDAHKERLEVFA--S-NFANDIPISFNYSYDPL--TE-YLSFIDNGDFSVDGVL-SD-----FPLTPSAAVDCFAH 397 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~--w-Tv~n~~~~~~~y~~D~~--~e-~~~~i~~G~~gVDGIi-TD-----~P~~~~~~l~~~~~ 397 (504)
...|+.||+.|++|-+ - ++..+. ....||. .+ +..+.+.| +|.|. .| .|....+.++.+.+
T Consensus 123 ~~~v~~a~~~G~~V~~~l~~~~~~e~----~~~~~~~~~~~~~~~~~~~G---~d~i~l~Dt~G~~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 123 SPVIGAAINDGLAIRGYVSCVVECPY----DGPVTPQAVASVTEQLFSLG---CHEVSLGDTIGRGTPDTVAAMLDAVLA 195 (295)
T ss_dssp HHHHHHHHHTTCEEEEEEECSSEETT----TEECCHHHHHHHHHHHHHHT---CSEEEEEETTSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHcCCeEEEEEEEEecCCc----CCCCCHHHHHHHHHHHHhcC---CCEEEecCCCCCcCHHHHHHHHHHHHH
Confidence 4579999999999862 2 232221 0112331 22 23333444 87653 22 46666666665543
Q ss_pred cCCCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeee
Q 010685 398 LGKNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPV 443 (504)
Q Consensus 398 ~~~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv 443 (504)
. .+ ....-+-+|.+ +|.+-+|++ +|++.|++.|++-|
T Consensus 196 ~---~~-~~~l~~H~Hn~-~Gla~an~l----~Ai~aG~~~vd~sv 232 (295)
T 1ydn_A 196 I---AP-AHSLAGHYHDT-GGRALDNIR----VSLEKGLRVFDASV 232 (295)
T ss_dssp T---SC-GGGEEEEEBCT-TSCHHHHHH----HHHHHTCCEEEEBT
T ss_pred h---CC-CCeEEEEECCC-cchHHHHHH----HHHHhCCCEEEecc
Confidence 2 11 11233667775 566667766 56678999988765
No 64
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=23.73 E-value=1.5e+02 Score=30.78 Aligned_cols=96 Identities=18% Similarity=0.198 Sum_probs=55.1
Q ss_pred HHHHHHHHHcCCeEEEec-CCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcC
Q 010685 330 TTIVLDAHKERLEVFASN-FANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLG 399 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wT-v~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~ 399 (504)
...|+.+++.|+.|.+.- +... +.+|+ .+..+.+.+.| +|.| +-| .|..+.+.++.+.+.-
T Consensus 130 ~~~i~~ak~~G~~v~~~i~~~~~------~~~~~e~~~~~a~~l~~~G---ad~I~l~DT~G~~~P~~v~~lv~~l~~~~ 200 (464)
T 2nx9_A 130 QQALQAVKKMGAHAQGTLCYTTS------PVHNLQTWVDVAQQLAELG---VDSIALKDMAGILTPYAAEELVSTLKKQV 200 (464)
T ss_dssp HHHHHHHHHTTCEEEEEEECCCC------TTCCHHHHHHHHHHHHHTT---CSEEEEEETTSCCCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHCCCEEEEEEEeeeC------CCCCHHHHHHHHHHHHHCC---CCEEEEcCCCCCcCHHHHHHHHHHHHHhc
Confidence 468999999999985332 1111 11233 22345556555 8866 444 4666666666665421
Q ss_pred CCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010685 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
....-+-+|.- .|.+..|++ +|++.||+.|++-|.
T Consensus 201 -----~~~i~~H~Hnd-~GlAvAN~l----aAv~AGa~~VD~ti~ 235 (464)
T 2nx9_A 201 -----DVELHLHCHST-AGLADMTLL----KAIEAGVDRVDTAIS 235 (464)
T ss_dssp -----CSCEEEEECCT-TSCHHHHHH----HHHHTTCSEEEEBCG
T ss_pred -----CCeEEEEECCC-CChHHHHHH----HHHHhCCCEEEEecc
Confidence 11223455653 344444544 677899999987776
No 65
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=23.35 E-value=3.7e+02 Score=25.56 Aligned_cols=137 Identities=10% Similarity=0.046 Sum_probs=70.4
Q ss_pred CCHHHHHHHhCCCceEEeeccchhhhc---cchHHHHHHHHHHHhcCCceEecC--------CHHHHHHHHHhcCCCCCc
Q 010685 206 LTVQDMARQIKPPGLWLNIQHDAFYAQ---HNLSMRSFVLSVSRSVVVNYISSP--------EVNFLRSIAARFRPSMTK 274 (504)
Q Consensus 206 pTLeEvL~~~k~~~l~iEIK~~~~~~~---~~~~~~~~v~~~l~~~g~~~isSf--------d~~~L~~l~~~~~~~~~~ 274 (504)
..|.+.|.. .+.++.-|+|..+.... ...+. ..+.....+.|...|+-- +.+.|+.+++.. ..|
T Consensus 41 ~~f~~al~~-~~~~~IaE~K~asPs~g~i~~~~~p-~~~A~~y~~~GA~~isvltd~~~f~Gs~~~l~~ir~~v---~lP 115 (272)
T 3qja_A 41 LDVMAALRE-PGIGVIAEVKRASPSAGALATIADP-AKLAQAYQDGGARIVSVVTEQRRFQGSLDDLDAVRASV---SIP 115 (272)
T ss_dssp CCHHHHHTS-SSCEEEEEEC-------------CH-HHHHHHHHHTTCSEEEEECCGGGHHHHHHHHHHHHHHC---SSC
T ss_pred CCHHHHHhc-CCCeEEEEEecCCCCCCccCCCCCH-HHHHHHHHHcCCCEEEEecChhhcCCCHHHHHHHHHhC---CCC
Confidence 356666652 34678999995432211 11222 234555666787655431 356788888765 466
Q ss_pred EEEEeccCCccCCCccccHHHHHhhHHHHHh-hhcccccCCccccccCccccCCCCHHHHHHHHHcCCeEEEecCCCCCC
Q 010685 275 LVFRFLGKSEIEPTTNQTYGSLLKNLTFIKT-FASGILVPKDYIWPVDESLYLLPHTTIVLDAHKERLEVFASNFANDIP 353 (504)
Q Consensus 275 lv~~ll~~~~~~~~~~~~y~~l~~~l~~i~~-~a~gi~~~~~~i~~~~~~~~l~~~~~lV~~ahk~Gl~V~~wTv~n~~~ 353 (504)
++.. + -.+++ | .+...+. -++++++.... ++. ..-..+++.+|+.|+.+++-+-+
T Consensus 116 vl~k--d-fiid~-----~-----qv~~A~~~GAD~VlLi~a~-l~~------~~l~~l~~~a~~lGl~~lvev~t---- 171 (272)
T 3qja_A 116 VLRK--D-FVVQP-----Y-----QIHEARAHGADMLLLIVAA-LEQ------SVLVSMLDRTESLGMTALVEVHT---- 171 (272)
T ss_dssp EEEE--S-CCCSH-----H-----HHHHHHHTTCSEEEEEGGG-SCH------HHHHHHHHHHHHTTCEEEEEESS----
T ss_pred EEEC--c-cccCH-----H-----HHHHHHHcCCCEEEEeccc-CCH------HHHHHHHHHHHHCCCcEEEEcCC----
Confidence 6631 1 11111 1 0222222 25555542111 110 01246889999999998876532
Q ss_pred ccccCCCChHHHHHHHhhcCCCcccccccC
Q 010685 354 ISFNYSYDPLTEYLSFIDNGDFSVDGVLSD 383 (504)
Q Consensus 354 ~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD 383 (504)
.+|+.+..+.| +|.|-++
T Consensus 172 ---------~ee~~~A~~~G---ad~IGv~ 189 (272)
T 3qja_A 172 ---------EQEADRALKAG---AKVIGVN 189 (272)
T ss_dssp ---------HHHHHHHHHHT---CSEEEEE
T ss_pred ---------HHHHHHHHHCC---CCEEEEC
Confidence 25677777655 8887665
No 66
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=22.08 E-value=3.2e+02 Score=28.99 Aligned_cols=98 Identities=15% Similarity=0.195 Sum_probs=54.6
Q ss_pred HHHHHHHHHcCCeEEE-ecCCCCCCccccCCCCh---HHHHHHHhhcCCCccccc-ccC-----CCCChHHHHHHhhhcC
Q 010685 330 TTIVLDAHKERLEVFA-SNFANDIPISFNYSYDP---LTEYLSFIDNGDFSVDGV-LSD-----FPLTPSAAVDCFAHLG 399 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~-wTv~n~~~~~~~y~~D~---~~e~~~~i~~G~~gVDGI-iTD-----~P~~~~~~l~~~~~~~ 399 (504)
...++.+++.|+.|.+ +..... +.+++ .+....+.+.| +|.| +-| .|..+.+.++.+.+.-
T Consensus 147 ~~~i~~ak~~G~~v~~~i~~~~~------~~~~~e~~~~~a~~l~~~G---ad~I~L~DT~G~~~P~~v~~lv~~l~~~~ 217 (539)
T 1rqb_A 147 AHAMAAVKKAGKHAQGTICYTIS------PVHTVEGYVKLAGQLLDMG---ADSIALKDMAALLKPQPAYDIIKAIKDTY 217 (539)
T ss_dssp HHHHHHHHHTTCEEEEEEECCCS------TTCCHHHHHHHHHHHHHTT---CSEEEEEETTCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEEEEEEeeeC------CCCCHHHHHHHHHHHHHcC---CCEEEeCCCCCCcCHHHHHHHHHHHHHhc
Confidence 4688999999999842 211111 11233 22345556555 8865 444 3666666666554321
Q ss_pred CCcccccceeEeeCCCCCCCCCCchHHHHHHHHHcCCCEEEeeee
Q 010685 400 KNASKSANLLVISKNGASGDYPSCTNLAYQKAISDGVDFIDCPVQ 444 (504)
Q Consensus 400 ~~~~~~~~~~iiaHRG~~~~~penT~~a~~~a~~~g~~~iE~Dv~ 444 (504)
+ +....-+-+|.- .+...+....|++.||+.|++-+.
T Consensus 218 p---~~i~I~~H~Hnd-----~GlAvAN~laAveAGa~~VD~ti~ 254 (539)
T 1rqb_A 218 G---QKTQINLHCHST-----TGVTEVSLMKAIEAGVDVVDTAIS 254 (539)
T ss_dssp C---TTCCEEEEEBCT-----TSCHHHHHHHHHHTTCSEEEEBCG
T ss_pred C---CCceEEEEeCCC-----CChHHHHHHHHHHhCCCEEEEecc
Confidence 1 111223455653 234455555778899999988774
No 67
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=20.92 E-value=40 Score=31.45 Aligned_cols=29 Identities=24% Similarity=0.179 Sum_probs=25.4
Q ss_pred CCchHHHHHHHHHcCCCEEEeeeeeecCCeEE
Q 010685 421 PSCTNLAYQKAISDGVDFIDCPVQMSKDGVPF 452 (504)
Q Consensus 421 penT~~a~~~a~~~g~~~iE~Dv~~t~Dg~~v 452 (504)
.++.....+.+.+.|+|++++|+ +||..|
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi---~DG~fv 44 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDV---MDGRFV 44 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEE---EBSSSS
T ss_pred HhHHHHHHHHHHHcCCCEEEEEE---EecCCC
Confidence 78889999999999999999999 477655
No 68
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=20.78 E-value=2.9e+02 Score=25.04 Aligned_cols=99 Identities=5% Similarity=-0.058 Sum_probs=56.9
Q ss_pred HHHHHHHHHcCCeEEEecCCCCCCccccCCC--ChHHHHHHHhhcCCCcccccccCCCCChHHHHHHhhhcCCCcccccc
Q 010685 330 TTIVLDAHKERLEVFASNFANDIPISFNYSY--DPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVDCFAHLGKNASKSAN 407 (504)
Q Consensus 330 ~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~--D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~~~~~~~~~~~~~~~ 407 (504)
.++++.+ +.|+-+.+.+..++. .. ... +..+-...+.+. |+++|..|.|..+..++ +. ...
T Consensus 8 ~~~~~~~-~~~~~~~~~~~~~~p-~~--~~~~~~~~~~a~~~~~~---G~~~i~~~~~~~i~~i~----~~------~~~ 70 (234)
T 1yxy_A 8 EKLMEQL-KGGIIVSCQALPGEP-LY--SETGGIMPLMAKAAQEA---GAVGIRANSVRDIKEIQ----AI------TDL 70 (234)
T ss_dssp HHHHHHH-TTSCEEECCCCTTST-TC--CTTCCSHHHHHHHHHHH---TCSEEEEESHHHHHHHH----TT------CCS
T ss_pred HHHHHHH-hCCEEEEeeCCCCCC-Cc--CCccchHHHHHHHHHHC---CCcEeecCCHHHHHHHH----Hh------CCC
Confidence 3567777 888998888876541 10 001 222333444444 49999888664433332 21 123
Q ss_pred eeEeeCCC---CCCCCCCchHHHHHHHHHcCCCEEEeeeee
Q 010685 408 LLVISKNG---ASGDYPSCTNLAYQKAISDGVDFIDCPVQM 445 (504)
Q Consensus 408 ~~iiaHRG---~~~~~penT~~a~~~a~~~g~~~iE~Dv~~ 445 (504)
|++-.-|+ ..+..-+++....+.+++.|||.|.++...
T Consensus 71 p~i~~~~~~~~~~~~~i~~~~~~i~~~~~~Gad~V~l~~~~ 111 (234)
T 1yxy_A 71 PIIGIIKKDYPPQEPFITATMTEVDQLAALNIAVIAMDCTK 111 (234)
T ss_dssp CEEEECBCCCTTSCCCBSCSHHHHHHHHTTTCSEEEEECCS
T ss_pred CEEeeEcCCCCccccccCChHHHHHHHHHcCCCEEEEcccc
Confidence 44322222 112334567788889999999999887654
No 69
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=20.74 E-value=63 Score=29.65 Aligned_cols=57 Identities=16% Similarity=0.080 Sum_probs=36.6
Q ss_pred CHHHHHHHHHcCCeEEEecCCCCCCccccCCCChHHHHHHHhhcCCCcccccccCCCCChHHHHH
Q 010685 329 HTTIVLDAHKERLEVFASNFANDIPISFNYSYDPLTEYLSFIDNGDFSVDGVLSDFPLTPSAAVD 393 (504)
Q Consensus 329 ~~~lV~~ahk~Gl~V~~wTv~n~~~~~~~y~~D~~~e~~~~i~~G~~gVDGIiTD~P~~~~~~l~ 393 (504)
-+++|+.+|++|..+++. ++.-. ..+.|. .-..|+.+ ..++|||||-.+..+..+.+
T Consensus 43 l~~~v~~lk~~~K~v~Vh-~Dli~----Gls~d~--~ai~fL~~-~~~pdGIIsTk~~~i~~Ak~ 99 (192)
T 3kts_A 43 LKALVKYAQAGGKKVLLH-ADLVN----GLKNDD--YAIDFLCT-EICPDGIISTRGNAIMKAKQ 99 (192)
T ss_dssp HHHHHHHHHHTTCEEEEE-GGGEE----TCCCSH--HHHHHHHH-TTCCSEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCeEEEe-cCchh----ccCCcH--HHHHHHHh-CCCCCEEEeCcHHHHHHHHH
Confidence 478999999999999984 22111 112232 22233333 24699999999988777664
No 70
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=20.16 E-value=49 Score=30.90 Aligned_cols=29 Identities=14% Similarity=-0.062 Sum_probs=25.0
Q ss_pred CchHHHHHHHHHHcCCCCcEEEEeeEEecCCeEE
Q 010685 105 PDSSSIAYSLTLITSAPSVILWCDVQLTKDEAGI 138 (504)
Q Consensus 105 pEnT~~a~~~A~~~g~d~~~vE~DVqlTkDg~~V 138 (504)
.++.....+.+.+.|+| ++++|+ +||..|
T Consensus 16 ~~~l~~~i~~~~~~Gad--~ihldi---~DG~fv 44 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGAD--WIHVDV---MDGRFV 44 (230)
T ss_dssp GGGHHHHHHHHHHTTCS--EEEEEE---EBSSSS
T ss_pred HhHHHHHHHHHHHcCCC--EEEEEE---EecCCC
Confidence 68889999999999999 999999 476544
Done!