Query 010687
Match_columns 504
No_of_seqs 300 out of 1981
Neff 7.1
Searched_HMMs 46136
Date Fri Mar 29 03:25:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010687.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010687hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02192 3-ketoacyl-CoA syntha 100.0 3E-120 7E-125 962.6 42.3 496 9-504 11-507 (511)
2 PLN02854 3-ketoacyl-CoA syntha 100.0 6E-119 1E-123 955.1 47.7 499 6-504 15-520 (521)
3 PLN02377 3-ketoacyl-CoA syntha 100.0 1E-116 3E-121 937.5 47.2 497 6-502 4-500 (502)
4 PLN02932 3-ketoacyl-CoA syntha 100.0 5E-109 1E-113 875.0 43.4 470 34-503 2-477 (478)
5 PLN00415 3-ketoacyl-CoA syntha 100.0 2.3E-99 5E-104 792.2 42.4 430 73-502 33-465 (466)
6 PF08392 FAE1_CUT1_RppA: FAE1/ 100.0 3.7E-77 8E-82 588.4 25.9 290 92-381 1-290 (290)
7 COG0332 FabH 3-oxoacyl-[acyl-c 100.0 1.6E-56 3.5E-61 452.6 22.9 317 98-480 2-323 (323)
8 PLN03172 chalcone synthase fam 100.0 1.4E-51 3E-56 431.9 31.9 348 98-481 15-388 (393)
9 cd00831 CHS_like Chalcone and 100.0 1.5E-51 3.3E-56 428.6 30.3 346 100-477 2-361 (361)
10 PLN03169 chalcone synthase fam 100.0 1.5E-50 3.3E-55 424.5 32.1 353 93-480 15-389 (391)
11 PLN03168 chalcone synthase; Pr 100.0 1.9E-50 4.2E-55 423.1 32.5 348 98-482 14-388 (389)
12 PLN03173 chalcone synthase; Pr 100.0 2.6E-50 5.6E-55 422.0 31.6 348 98-481 15-388 (391)
13 PLN03171 chalcone synthase-lik 100.0 3.6E-49 7.8E-54 415.1 32.1 353 97-481 20-396 (399)
14 PLN03170 chalcone synthase; Pr 100.0 3.1E-49 6.6E-54 415.4 30.7 350 98-482 19-393 (401)
15 PRK05963 3-oxoacyl-(acyl carri 100.0 2.1E-48 4.6E-53 399.3 30.5 318 99-479 3-326 (326)
16 COG3424 BcsA Predicted naringe 100.0 5.6E-48 1.2E-52 376.1 25.8 346 100-481 2-354 (356)
17 PRK12880 3-oxoacyl-(acyl carri 100.0 1E-47 2.3E-52 398.3 29.6 333 96-484 4-343 (353)
18 PLN02326 3-oxoacyl-[acyl-carri 100.0 4.9E-47 1.1E-51 397.2 30.2 328 98-479 46-379 (379)
19 PRK07204 3-oxoacyl-(acyl carri 100.0 1.2E-45 2.5E-50 379.5 31.5 324 98-479 3-329 (329)
20 PRK12879 3-oxoacyl-(acyl carri 100.0 1.5E-45 3.2E-50 377.6 31.8 317 98-479 3-324 (325)
21 CHL00203 fabH 3-oxoacyl-acyl-c 100.0 1.1E-45 2.4E-50 379.4 29.8 319 99-479 2-325 (326)
22 PRK09258 3-oxoacyl-(acyl carri 100.0 7.6E-45 1.6E-49 374.6 30.3 318 98-479 4-338 (338)
23 cd00830 KAS_III Ketoacyl-acyl 100.0 4.4E-44 9.6E-49 365.3 30.4 318 99-477 1-320 (320)
24 PRK06840 hypothetical protein; 100.0 7.4E-44 1.6E-48 367.7 31.6 327 97-480 2-336 (339)
25 TIGR00747 fabH 3-oxoacyl-(acyl 100.0 5.6E-44 1.2E-48 365.0 29.5 312 99-479 2-318 (318)
26 PRK09352 3-oxoacyl-(acyl carri 100.0 3.7E-42 8E-47 351.6 31.1 311 99-479 3-318 (319)
27 PRK06816 3-oxoacyl-(acyl carri 100.0 1E-41 2.2E-46 356.9 31.5 346 99-480 2-378 (378)
28 PRK04262 hypothetical protein; 100.0 5.3E-42 1.1E-46 355.2 28.2 310 99-484 2-313 (347)
29 TIGR00748 HMG_CoA_syn_Arc hydr 100.0 1.6E-41 3.5E-46 351.3 25.2 315 100-493 2-319 (345)
30 PRK07515 3-oxoacyl-(acyl carri 100.0 4.4E-40 9.5E-45 343.9 31.0 342 99-479 2-371 (372)
31 cd00827 init_cond_enzymes "ini 100.0 2.7E-39 5.8E-44 330.6 24.9 320 99-477 1-324 (324)
32 TIGR01835 HMG-CoA-S_prok 3-hyd 100.0 1.7E-35 3.6E-40 310.0 28.9 307 100-481 1-319 (379)
33 PLN02577 hydroxymethylglutaryl 100.0 1.5E-33 3.3E-38 298.6 27.0 311 96-481 1-372 (459)
34 PF00195 Chal_sti_synt_N: Chal 100.0 4E-32 8.6E-37 262.0 15.4 203 94-298 9-226 (226)
35 TIGR01833 HMG-CoA-S_euk 3-hydr 100.0 1.3E-30 2.8E-35 276.0 25.5 320 99-482 1-376 (454)
36 COG3425 PksG 3-hydroxy-3-methy 100.0 1.9E-30 4.2E-35 263.9 23.0 308 99-484 2-315 (377)
37 cd00327 cond_enzymes Condensin 100.0 9.1E-28 2E-32 236.7 16.1 237 174-477 7-254 (254)
38 cd00825 decarbox_cond_enzymes 99.9 4.2E-25 9.1E-30 226.3 15.4 251 174-477 11-332 (332)
39 PF02797 Chal_sti_synt_C: Chal 99.8 2.5E-19 5.4E-24 163.8 12.2 128 325-481 16-151 (151)
40 PF01154 HMG_CoA_synt_N: Hydro 99.8 4.7E-19 1E-23 163.7 13.2 167 96-297 1-172 (174)
41 PF08541 ACP_syn_III_C: 3-Oxoa 99.8 1.2E-19 2.6E-24 151.8 6.9 83 394-479 8-90 (90)
42 PRK06147 3-oxoacyl-(acyl carri 99.7 6.1E-16 1.3E-20 160.6 18.2 310 99-480 4-343 (348)
43 TIGR02845 spore_V_AD stage V s 99.7 2.6E-15 5.7E-20 151.1 21.1 116 174-299 50-173 (327)
44 KOG1393 Hydroxymethylglutaryl- 99.7 4.7E-15 1E-19 149.1 18.9 324 96-484 8-381 (462)
45 PRK08304 stage V sporulation p 99.6 2.2E-13 4.7E-18 137.7 20.3 117 174-299 56-179 (337)
46 cd00834 KAS_I_II Beta-ketoacyl 99.5 1.7E-12 3.7E-17 137.0 22.8 183 98-299 1-243 (406)
47 cd00751 thiolase Thiolase are 99.5 8.5E-13 1.8E-17 139.0 20.3 94 174-268 22-116 (386)
48 smart00825 PKS_KS Beta-ketoacy 99.4 2.9E-11 6.3E-16 128.6 24.9 121 174-299 87-247 (424)
49 PRK09051 beta-ketothiolase; Pr 99.4 1.4E-11 3E-16 130.1 21.7 94 174-268 27-122 (394)
50 PRK05656 acetyl-CoA acetyltran 99.4 1.7E-11 3.6E-16 129.5 22.0 94 174-268 26-120 (393)
51 PF08545 ACP_syn_III: 3-Oxoacy 99.4 2.7E-13 5.8E-18 111.0 6.4 79 229-319 1-79 (80)
52 TIGR01930 AcCoA-C-Actrans acet 99.4 7.8E-12 1.7E-16 131.7 18.8 94 174-268 21-115 (386)
53 PRK08313 acetyl-CoA acetyltran 99.4 4E-11 8.7E-16 126.3 21.9 92 174-267 24-117 (386)
54 PRK09052 acetyl-CoA acetyltran 99.4 5.2E-11 1.1E-15 125.9 21.5 94 174-268 31-127 (399)
55 cd00829 SCP-x_thiolase Thiolas 99.4 7.5E-11 1.6E-15 123.5 21.8 93 174-268 16-109 (375)
56 PRK06064 acetyl-CoA acetyltran 99.3 1E-10 2.3E-15 123.3 22.1 92 174-267 22-116 (389)
57 PRK12578 acetyl-CoA acetyltran 99.3 2.6E-10 5.7E-15 120.1 24.0 93 174-268 21-114 (385)
58 PRK06059 lipid-transfer protei 99.3 1.8E-10 3.8E-15 122.0 22.0 93 174-268 23-117 (399)
59 TIGR03150 fabF beta-ketoacyl-a 99.3 2.6E-10 5.5E-15 120.6 21.8 185 98-299 1-243 (407)
60 PRK06501 3-oxoacyl-(acyl carri 99.3 8.7E-10 1.9E-14 117.7 24.9 182 99-299 12-257 (425)
61 PRK06954 acetyl-CoA acetyltran 99.3 3.5E-10 7.6E-15 119.6 20.7 94 174-268 31-125 (397)
62 cd00828 elong_cond_enzymes "el 99.3 2.1E-10 4.5E-15 121.5 18.9 123 173-299 71-243 (407)
63 PRK05790 putative acyltransfer 99.3 5.7E-10 1.2E-14 117.9 22.1 93 174-267 26-119 (393)
64 PRK12404 stage V sporulation p 99.3 5.1E-10 1.1E-14 112.9 20.2 116 174-298 54-176 (334)
65 PRK06445 acetyl-CoA acetyltran 99.2 6.2E-10 1.3E-14 117.7 20.7 91 174-267 32-126 (394)
66 PRK06025 acetyl-CoA acetyltran 99.2 6.5E-10 1.4E-14 117.5 20.5 94 174-268 29-124 (417)
67 PRK07314 3-oxoacyl-(acyl carri 99.2 1.4E-09 3E-14 115.4 23.0 185 98-299 2-244 (411)
68 cd00833 PKS polyketide synthas 99.2 2.4E-09 5.1E-14 113.6 23.0 121 174-299 87-247 (421)
69 PRK07661 acetyl-CoA acetyltran 99.2 1.8E-09 3.9E-14 114.0 21.8 94 174-268 27-122 (391)
70 PRK06690 acetyl-CoA acetyltran 99.2 1.6E-09 3.5E-14 113.0 20.5 242 174-480 25-360 (361)
71 PRK06158 thiolase; Provisional 99.2 2.3E-09 5E-14 113.0 20.7 87 174-265 28-115 (384)
72 PRK08256 lipid-transfer protei 99.2 3.7E-09 8.1E-14 111.6 21.6 89 174-267 22-111 (391)
73 PLN02287 3-ketoacyl-CoA thiola 99.1 4.8E-09 1E-13 112.5 21.4 94 174-268 71-166 (452)
74 PLN02644 acetyl-CoA C-acetyltr 99.1 8.1E-09 1.8E-13 109.2 21.9 93 174-267 25-118 (394)
75 PRK06333 3-oxoacyl-(acyl carri 99.1 7.8E-09 1.7E-13 110.2 21.7 121 174-299 82-256 (424)
76 PRK07108 acetyl-CoA acetyltran 99.1 3.8E-10 8.2E-15 119.2 11.4 94 174-268 27-122 (392)
77 PRK07103 polyketide beta-ketoa 99.1 8.2E-09 1.8E-13 109.7 21.0 121 174-299 80-251 (410)
78 PRK06633 acetyl-CoA acetyltran 99.1 7.1E-09 1.5E-13 109.4 19.2 94 174-268 27-121 (392)
79 PRK08439 3-oxoacyl-(acyl carri 99.0 7.6E-08 1.7E-12 102.2 25.7 121 174-299 72-244 (406)
80 PRK06205 acetyl-CoA acetyltran 99.0 8.8E-10 1.9E-14 116.9 10.4 94 174-268 26-120 (404)
81 PRK08722 3-oxoacyl-(acyl carri 99.0 9.9E-08 2.1E-12 101.6 26.0 190 94-299 1-246 (414)
82 PRK08235 acetyl-CoA acetyltran 99.0 1E-09 2.2E-14 115.9 10.8 94 174-268 26-120 (393)
83 PRK08242 acetyl-CoA acetyltran 99.0 1.3E-09 2.8E-14 115.3 11.2 94 174-268 28-123 (402)
84 PRK06504 acetyl-CoA acetyltran 99.0 3E-08 6.5E-13 104.7 21.1 94 174-268 26-121 (390)
85 PRK09116 3-oxoacyl-(acyl carri 98.9 6.8E-08 1.5E-12 102.6 20.6 189 98-299 2-245 (405)
86 PRK08170 acetyl-CoA acetyltran 98.9 3.7E-09 8.1E-14 112.8 11.0 94 174-268 27-121 (426)
87 PRK07801 acetyl-CoA acetyltran 98.9 5.7E-08 1.2E-12 102.4 19.5 93 174-267 26-120 (382)
88 PRK05952 3-oxoacyl-(acyl carri 98.9 2.4E-07 5.2E-12 97.6 23.3 245 177-478 59-380 (381)
89 PLN02836 3-oxoacyl-[acyl-carri 98.9 3.1E-07 6.8E-12 98.5 24.2 121 174-299 93-267 (437)
90 cd00826 nondecarbox_cond_enzym 98.9 6E-09 1.3E-13 110.1 10.7 93 174-268 23-117 (393)
91 PRK09185 3-oxoacyl-(acyl carri 98.9 8.2E-07 1.8E-11 93.9 25.4 83 210-297 137-233 (392)
92 PLN02787 3-oxoacyl-[acyl-carri 98.8 8.5E-07 1.8E-11 97.2 25.3 120 174-299 199-373 (540)
93 PF00108 Thiolase_N: Thiolase, 98.8 1.4E-08 2.9E-13 101.8 10.0 95 174-269 26-121 (264)
94 PTZ00050 3-oxoacyl-acyl carrie 98.8 2.7E-07 5.8E-12 98.5 20.5 251 174-478 77-419 (421)
95 PRK07967 3-oxoacyl-(acyl carri 98.8 7.1E-07 1.5E-11 94.8 23.5 187 98-299 2-244 (406)
96 PRK06065 acetyl-CoA acetyltran 98.8 1.2E-08 2.7E-13 107.7 10.0 91 174-266 29-121 (392)
97 cd00832 CLF Chain-length facto 98.8 7.7E-07 1.7E-11 94.4 23.4 120 174-299 71-241 (399)
98 PRK08257 acetyl-CoA acetyltran 98.8 7.5E-07 1.6E-11 96.9 23.1 92 174-267 27-120 (498)
99 PRK07910 3-oxoacyl-(acyl carri 98.8 1.6E-06 3.6E-11 92.4 24.2 186 98-299 12-254 (418)
100 PRK13359 beta-ketoadipyl CoA t 98.7 7.1E-08 1.5E-12 102.1 11.1 94 174-268 26-122 (400)
101 PRK07851 acetyl-CoA acetyltran 98.7 7.6E-08 1.6E-12 102.2 10.9 93 174-268 27-122 (406)
102 PRK08963 fadI 3-ketoacyl-CoA t 98.7 5.8E-08 1.3E-12 103.8 10.1 94 174-268 29-123 (428)
103 PRK07516 acetyl-CoA acetyltran 98.7 7.9E-08 1.7E-12 101.5 10.6 93 174-268 22-117 (389)
104 PRK06519 3-oxoacyl-(acyl carri 98.7 9.5E-06 2.1E-10 86.0 25.7 187 97-299 5-255 (398)
105 PRK06289 acetyl-CoA acetyltran 98.7 9.6E-08 2.1E-12 101.4 10.4 91 174-268 26-122 (403)
106 PRK07850 acetyl-CoA acetyltran 98.7 1.2E-07 2.6E-12 100.1 10.9 94 174-268 26-121 (387)
107 PRK09050 beta-ketoadipyl CoA t 98.6 1.3E-07 2.8E-12 100.3 10.5 94 174-268 26-122 (401)
108 PRK08131 acetyl-CoA acetyltran 98.6 1.8E-07 3.9E-12 99.2 11.0 94 174-268 26-121 (401)
109 PRK06366 acetyl-CoA acetyltran 98.6 2.2E-07 4.7E-12 98.2 10.8 94 174-268 26-120 (388)
110 TIGR02430 pcaF beta-ketoadipyl 98.6 2E-07 4.4E-12 98.7 10.6 94 174-268 25-121 (400)
111 TIGR02446 FadI fatty oxidation 98.6 1.9E-07 4E-12 99.9 9.8 94 174-268 31-125 (430)
112 PF00109 ketoacyl-synt: Beta-k 98.6 4E-07 8.7E-12 89.8 11.4 120 173-297 86-251 (254)
113 PRK06157 acetyl-CoA acetyltran 98.5 4.5E-07 9.7E-12 96.1 10.8 93 174-268 27-120 (398)
114 PRK08947 fadA 3-ketoacyl-CoA t 98.5 4E-07 8.7E-12 96.1 9.9 94 174-268 27-123 (387)
115 PTZ00455 3-ketoacyl-CoA thiola 98.5 7E-07 1.5E-11 95.7 11.1 94 174-268 48-152 (438)
116 PRK06066 acetyl-CoA acetyltran 98.5 3.8E-05 8.2E-10 81.1 23.7 89 174-267 25-116 (385)
117 PRK06365 acetyl-CoA acetyltran 98.5 6.6E-07 1.4E-11 95.7 10.3 93 174-268 37-131 (430)
118 PRK14691 3-oxoacyl-(acyl carri 98.4 4.1E-06 9E-11 87.0 15.3 121 174-299 4-174 (342)
119 TIGR02445 fadA fatty oxidation 98.4 6.2E-07 1.3E-11 94.6 9.0 94 174-268 25-121 (385)
120 PF07451 SpoVAD: Stage V sporu 98.4 1.8E-05 3.9E-10 79.2 17.9 117 174-299 51-174 (329)
121 PRK09268 acetyl-CoA acetyltran 98.4 1.4E-06 3.1E-11 93.1 10.8 94 174-268 31-125 (427)
122 TIGR02813 omega_3_PfaA polyket 98.4 2.7E-05 5.8E-10 98.2 22.6 216 212-481 185-463 (2582)
123 PRK07937 lipid-transfer protei 98.2 0.00014 3E-09 76.0 20.8 88 175-267 25-114 (352)
124 PRK08142 acetyl-CoA acetyltran 98.1 8.7E-06 1.9E-10 86.0 8.9 88 174-266 25-112 (388)
125 COG0304 FabB 3-oxoacyl-(acyl-c 98.0 0.00031 6.6E-09 74.6 19.0 121 172-299 69-244 (412)
126 PRK07855 lipid-transfer protei 97.9 3.3E-05 7.2E-10 81.6 9.6 85 174-263 24-108 (386)
127 KOG1389 3-oxoacyl CoA thiolase 97.9 0.00018 3.8E-09 72.0 13.6 95 174-270 61-157 (435)
128 COG3321 Polyketide synthase mo 97.7 0.0017 3.6E-08 77.0 19.7 186 98-298 4-250 (1061)
129 COG0183 PaaJ Acetyl-CoA acetyl 97.7 0.00016 3.6E-09 76.5 9.2 95 174-269 27-125 (392)
130 KOG1390 Acetyl-CoA acetyltrans 97.3 0.00067 1.5E-08 68.2 7.2 94 174-268 30-124 (396)
131 KOG1406 Peroxisomal 3-ketoacyl 97.0 0.00097 2.1E-08 65.5 5.2 89 175-268 30-119 (408)
132 PF08540 HMG_CoA_synt_C: Hydro 96.8 0.001 2.3E-08 67.1 3.6 60 423-482 143-204 (282)
133 KOG1394 3-oxoacyl-(acyl-carrie 96.4 0.048 1E-06 56.1 12.3 119 173-298 93-268 (440)
134 KOG1391 Acetyl-CoA acetyltrans 95.2 0.039 8.4E-07 54.3 6.0 92 174-268 28-123 (396)
135 KOG1392 Acetyl-CoA acetyltrans 94.6 0.03 6.5E-07 55.8 3.4 94 174-268 66-160 (465)
136 PF08541 ACP_syn_III_C: 3-Oxoa 94.5 0.043 9.3E-07 45.4 3.8 76 186-265 1-79 (90)
137 TIGR00748 HMG_CoA_syn_Arc hydr 94.0 0.21 4.5E-06 52.0 8.6 83 174-262 206-293 (345)
138 PRK06816 3-oxoacyl-(acyl carri 94.0 0.28 6E-06 51.8 9.5 89 173-265 269-365 (378)
139 PRK06025 acetyl-CoA acetyltran 93.8 0.2 4.4E-06 53.5 8.0 91 179-296 318-416 (417)
140 PRK05963 3-oxoacyl-(acyl carri 92.9 0.28 6.1E-06 50.3 7.3 86 171-263 222-313 (326)
141 PRK09258 3-oxoacyl-(acyl carri 92.8 0.46 9.9E-06 49.0 8.7 90 169-265 232-327 (338)
142 PRK12879 3-oxoacyl-(acyl carri 92.1 0.67 1.4E-05 47.4 8.7 84 173-263 222-311 (325)
143 PRK07204 3-oxoacyl-(acyl carri 91.8 0.73 1.6E-05 47.3 8.7 84 172-262 226-315 (329)
144 PF13723 Ketoacyl-synt_2: Beta 91.6 3.9 8.4E-05 39.9 12.9 114 174-299 34-172 (218)
145 cd00825 decarbox_cond_enzymes 91.4 0.76 1.6E-05 46.9 8.4 78 176-253 205-286 (332)
146 TIGR00747 fabH 3-oxoacyl-(acyl 91.4 0.66 1.4E-05 47.3 7.8 84 173-263 216-305 (318)
147 PRK04262 hypothetical protein; 90.8 0.55 1.2E-05 48.8 6.6 68 176-247 209-281 (347)
148 cd00830 KAS_III Ketoacyl-acyl 90.7 0.88 1.9E-05 46.2 8.0 85 172-263 219-309 (320)
149 PRK09352 3-oxoacyl-(acyl carri 90.2 1.2 2.6E-05 45.4 8.4 84 173-263 216-305 (319)
150 PRK13359 beta-ketoadipyl CoA t 90.2 1.1 2.4E-05 47.7 8.4 93 179-296 299-399 (400)
151 CHL00203 fabH 3-oxoacyl-acyl-c 90.1 1.2 2.6E-05 45.8 8.3 81 176-263 226-312 (326)
152 PRK06840 hypothetical protein; 90.0 0.92 2E-05 46.8 7.5 81 176-263 237-322 (339)
153 PRK07851 acetyl-CoA acetyltran 89.8 1.6 3.4E-05 46.6 9.2 85 395-480 321-405 (406)
154 PRK09050 beta-ketoadipyl CoA t 89.6 0.8 1.7E-05 48.8 6.8 70 178-251 299-376 (401)
155 PRK07515 3-oxoacyl-(acyl carri 89.5 1.2 2.5E-05 46.8 7.9 86 172-263 267-358 (372)
156 PRK08242 acetyl-CoA acetyltran 89.5 1.6 3.5E-05 46.5 9.0 54 395-449 318-371 (402)
157 cd00327 cond_enzymes Condensin 89.2 1.7 3.7E-05 42.4 8.3 78 176-253 145-226 (254)
158 PLN02326 3-oxoacyl-[acyl-carri 89.1 2.1 4.6E-05 45.1 9.5 84 173-263 277-366 (379)
159 TIGR02430 pcaF beta-ketoadipyl 88.4 2.5 5.5E-05 45.0 9.5 83 395-479 314-399 (400)
160 PRK07850 acetyl-CoA acetyltran 88.3 3 6.4E-05 44.3 9.9 83 395-479 303-386 (387)
161 PRK08235 acetyl-CoA acetyltran 88.0 2.1 4.6E-05 45.4 8.6 82 395-478 309-391 (393)
162 PRK06205 acetyl-CoA acetyltran 87.8 3.5 7.5E-05 44.0 10.1 84 395-480 316-403 (404)
163 PRK07108 acetyl-CoA acetyltran 87.7 2.2 4.9E-05 45.3 8.6 54 395-449 308-361 (392)
164 COG0332 FabH 3-oxoacyl-[acyl-c 87.4 1.2 2.6E-05 46.0 6.2 88 169-262 216-308 (323)
165 PRK07516 acetyl-CoA acetyltran 86.6 5.4 0.00012 42.2 10.7 56 395-451 278-351 (389)
166 PRK06147 3-oxoacyl-(acyl carri 85.7 1.7 3.7E-05 45.3 6.4 88 177-264 235-330 (348)
167 PF02803 Thiolase_C: Thiolase, 85.7 2.5 5.5E-05 37.4 6.4 75 178-259 24-106 (123)
168 PRK09052 acetyl-CoA acetyltran 85.6 2.6 5.7E-05 44.8 7.8 92 178-296 299-398 (399)
169 PRK06445 acetyl-CoA acetyltran 85.2 2.6 5.6E-05 44.7 7.5 67 178-250 294-368 (394)
170 PRK08947 fadA 3-ketoacyl-CoA t 85.2 6.6 0.00014 41.6 10.6 82 395-478 300-385 (387)
171 PRK09051 beta-ketothiolase; Pr 85.2 3.7 8E-05 43.7 8.6 68 178-251 294-369 (394)
172 COG3425 PksG 3-hydroxy-3-methy 85.0 3.4 7.3E-05 43.4 7.9 82 175-262 208-296 (377)
173 PRK08963 fadI 3-ketoacyl-CoA t 84.8 5 0.00011 43.1 9.5 84 395-479 327-427 (428)
174 PRK06366 acetyl-CoA acetyltran 84.7 4.8 0.0001 42.6 9.2 91 379-480 292-387 (388)
175 PRK05656 acetyl-CoA acetyltran 84.5 2 4.4E-05 45.6 6.3 50 178-233 293-342 (393)
176 PLN02287 3-ketoacyl-CoA thiola 84.4 2.6 5.6E-05 45.7 7.2 96 178-299 333-437 (452)
177 cd00831 CHS_like Chalcone and 84.3 2.8 6.1E-05 43.7 7.2 88 172-263 255-350 (361)
178 TIGR02445 fadA fatty oxidation 84.0 12 0.00026 39.7 11.9 81 395-479 298-384 (385)
179 PRK07661 acetyl-CoA acetyltran 83.2 3.4 7.3E-05 43.9 7.3 92 178-296 291-390 (391)
180 PRK08257 acetyl-CoA acetyltran 82.4 3.3 7.2E-05 45.4 7.1 52 178-233 294-346 (498)
181 PRK06954 acetyl-CoA acetyltran 82.3 2.1 4.6E-05 45.5 5.4 92 178-296 297-396 (397)
182 PLN03169 chalcone synthase fam 81.8 4.9 0.00011 42.6 7.9 88 173-262 278-374 (391)
183 PRK06690 acetyl-CoA acetyltran 79.4 5.6 0.00012 41.8 7.2 70 177-252 259-336 (361)
184 PRK06289 acetyl-CoA acetyltran 79.2 17 0.00037 38.6 11.0 86 378-470 282-393 (403)
185 PRK08131 acetyl-CoA acetyltran 78.2 13 0.00028 39.7 9.6 54 395-449 314-369 (401)
186 cd00827 init_cond_enzymes "ini 77.5 8.4 0.00018 39.1 7.8 87 170-264 217-314 (324)
187 PRK08170 acetyl-CoA acetyltran 76.8 11 0.00025 40.3 8.9 19 281-299 262-280 (426)
188 PRK07801 acetyl-CoA acetyltran 76.8 5.1 0.00011 42.3 6.1 67 179-251 283-357 (382)
189 cd00751 thiolase Thiolase are 76.6 4.9 0.00011 42.5 5.9 42 178-223 287-328 (386)
190 KOG1390 Acetyl-CoA acetyltrans 75.8 3.5 7.6E-05 42.2 4.2 80 394-478 311-394 (396)
191 PRK06504 acetyl-CoA acetyltran 75.6 6.6 0.00014 41.7 6.6 69 177-251 289-365 (390)
192 TIGR01835 HMG-CoA-S_prok 3-hyd 75.3 7.9 0.00017 40.8 7.1 73 172-245 201-285 (379)
193 PRK12880 3-oxoacyl-(acyl carri 74.3 8.8 0.00019 40.1 7.1 68 173-244 239-310 (353)
194 PRK09268 acetyl-CoA acetyltran 73.5 19 0.00041 38.7 9.5 26 177-202 310-335 (427)
195 cd00829 SCP-x_thiolase Thiolas 73.1 12 0.00026 39.0 7.8 44 177-224 252-295 (375)
196 PRK06064 acetyl-CoA acetyltran 71.6 12 0.00027 39.4 7.5 41 178-223 260-301 (389)
197 TIGR02446 FadI fatty oxidation 71.4 19 0.00041 38.8 8.9 56 395-451 329-401 (430)
198 TIGR01930 AcCoA-C-Actrans acet 71.1 10 0.00022 40.0 6.8 49 179-233 289-337 (386)
199 PF02803 Thiolase_C: Thiolase, 69.8 8.3 0.00018 34.2 4.8 83 394-478 39-122 (123)
200 PRK05790 putative acyltransfer 69.7 8.7 0.00019 40.7 5.8 68 178-251 293-368 (393)
201 PF02801 Ketoacyl-synt_C: Beta 69.1 1.4 3.1E-05 38.3 -0.2 77 177-253 26-110 (119)
202 TIGR00329 gcp_kae1 metallohydr 69.0 16 0.00034 37.4 7.4 35 174-208 48-82 (305)
203 cd00826 nondecarbox_cond_enzym 68.2 13 0.00029 39.4 6.8 70 178-251 271-364 (393)
204 cd00834 KAS_I_II Beta-ketoacyl 67.3 10 0.00023 39.8 5.8 77 177-253 276-358 (406)
205 PRK08256 lipid-transfer protei 67.0 16 0.00035 38.7 7.1 69 178-250 266-358 (391)
206 PF01135 PCMT: Protein-L-isoas 66.0 9.9 0.00021 36.8 4.9 42 434-475 49-90 (209)
207 PRK09185 3-oxoacyl-(acyl carri 64.9 25 0.00054 37.2 8.1 75 179-253 263-340 (392)
208 PLN02644 acetyl-CoA C-acetyltr 64.9 13 0.00027 39.5 5.9 67 179-251 294-368 (394)
209 PRK09604 UGMP family protein; 64.3 21 0.00046 37.0 7.3 49 174-222 51-104 (332)
210 COG1214 Inactive homolog of me 64.3 9.4 0.0002 37.2 4.4 59 175-233 38-97 (220)
211 COG0533 QRI7 Metal-dependent p 64.2 32 0.0007 35.8 8.4 87 175-266 51-138 (342)
212 PTZ00455 3-ketoacyl-CoA thiola 62.9 20 0.00043 38.8 6.9 43 178-224 311-353 (438)
213 TIGR01796 CM_mono_aroH monofun 62.7 21 0.00045 31.4 5.6 56 179-238 23-81 (117)
214 TIGR03725 bact_YeaZ universal 61.7 10 0.00022 36.2 4.1 37 174-210 33-69 (202)
215 PRK12578 acetyl-CoA acetyltran 61.2 19 0.00042 37.9 6.4 42 178-224 259-301 (385)
216 PRK14878 UGMP family protein; 61.0 17 0.00037 37.5 5.9 52 170-222 41-97 (323)
217 PRK06633 acetyl-CoA acetyltran 60.7 19 0.0004 38.3 6.2 67 178-252 292-368 (392)
218 PRK07314 3-oxoacyl-(acyl carri 60.4 15 0.00032 38.9 5.5 45 178-222 278-323 (411)
219 PF00814 Peptidase_M22: Glycop 60.0 13 0.00028 37.4 4.6 58 175-232 30-88 (268)
220 cd00828 elong_cond_enzymes "el 59.9 16 0.00035 38.6 5.6 46 176-221 274-320 (407)
221 PRK14691 3-oxoacyl-(acyl carri 59.8 22 0.00048 37.0 6.5 46 177-222 207-253 (342)
222 PRK06519 3-oxoacyl-(acyl carri 59.5 28 0.00061 37.1 7.3 44 178-222 282-326 (398)
223 TIGR03723 bact_gcp putative gl 59.4 30 0.00064 35.6 7.3 56 174-233 49-109 (314)
224 KOG1202 Animal-type fatty acid 58.4 15 0.00033 43.9 5.2 124 174-300 87-248 (2376)
225 PRK07855 lipid-transfer protei 57.7 36 0.00078 36.1 7.7 25 178-202 268-292 (386)
226 TIGR03150 fabF beta-ketoacyl-a 57.2 22 0.00047 37.5 6.0 45 178-222 277-322 (407)
227 PRK07937 lipid-transfer protei 57.1 37 0.0008 35.6 7.6 75 181-261 251-333 (352)
228 PTZ00050 3-oxoacyl-acyl carrie 56.8 31 0.00066 36.9 7.1 46 177-222 284-331 (421)
229 PRK06158 thiolase; Provisional 56.7 34 0.00073 36.2 7.3 41 178-223 256-297 (384)
230 PRK08313 acetyl-CoA acetyltran 55.6 49 0.0011 35.0 8.4 43 177-224 256-301 (386)
231 KOG2707 Predicted metalloprote 55.4 31 0.00068 36.0 6.4 50 174-223 82-136 (405)
232 cd00832 CLF Chain-length facto 54.6 24 0.00052 37.5 5.8 76 177-253 271-351 (399)
233 PLN02787 3-oxoacyl-[acyl-carri 54.5 29 0.00063 38.6 6.6 45 178-222 407-452 (540)
234 smart00825 PKS_KS Beta-ketoacy 54.5 35 0.00075 36.2 7.1 46 177-222 280-326 (424)
235 PRK06365 acetyl-CoA acetyltran 53.6 58 0.0013 35.1 8.6 41 178-223 295-338 (430)
236 TIGR03722 arch_KAE1 universal 52.5 24 0.00053 36.3 5.3 36 170-206 42-77 (322)
237 PRK05952 3-oxoacyl-(acyl carri 51.5 31 0.00067 36.5 6.0 45 177-221 255-300 (381)
238 cd02185 AroH Chorismate mutase 51.0 47 0.001 29.2 5.9 57 179-238 23-81 (117)
239 PTZ00340 O-sialoglycoprotein e 50.6 55 0.0012 34.2 7.6 58 175-233 50-109 (345)
240 KOG2708 Predicted metalloprote 50.1 37 0.0008 33.5 5.6 86 175-266 50-136 (336)
241 PRK06059 lipid-transfer protei 49.7 56 0.0012 34.6 7.7 40 179-223 276-316 (399)
242 PRK09605 bifunctional UGMP fam 49.6 46 0.00099 36.7 7.2 84 170-265 45-134 (535)
243 PRK06501 3-oxoacyl-(acyl carri 49.5 38 0.00083 36.3 6.4 44 178-221 291-335 (425)
244 COG0304 FabB 3-oxoacyl-(acyl-c 49.0 32 0.00069 36.9 5.6 44 178-221 278-322 (412)
245 PRK06157 acetyl-CoA acetyltran 48.6 87 0.0019 33.3 8.9 42 178-224 268-312 (398)
246 COG4126 Hydantoin racemase [Am 48.0 1.1E+02 0.0024 30.0 8.5 101 132-253 118-218 (230)
247 PRK08304 stage V sporulation p 47.9 75 0.0016 33.1 7.9 87 178-266 210-312 (337)
248 PRK08722 3-oxoacyl-(acyl carri 47.4 39 0.00085 36.1 6.1 44 178-221 280-324 (414)
249 PRK09116 3-oxoacyl-(acyl carri 46.6 33 0.00071 36.6 5.3 44 178-221 277-321 (405)
250 PLN03170 chalcone synthase; Pr 46.1 75 0.0016 33.9 8.0 70 173-246 278-353 (401)
251 PRK09585 anmK anhydro-N-acetyl 45.8 57 0.0012 34.4 6.8 87 167-255 62-158 (365)
252 PLN03173 chalcone synthase; Pr 45.5 87 0.0019 33.3 8.3 51 172-226 273-323 (391)
253 PF07736 CM_1: Chorismate muta 44.7 56 0.0012 28.8 5.5 55 175-233 19-76 (118)
254 cd00833 PKS polyketide synthas 44.3 48 0.001 34.9 6.1 27 176-202 279-305 (421)
255 PRK06333 3-oxoacyl-(acyl carri 43.8 39 0.00085 35.9 5.4 45 177-221 289-334 (424)
256 KOG1406 Peroxisomal 3-ketoacyl 43.2 22 0.00048 35.6 3.1 29 174-202 270-298 (408)
257 PRK07910 3-oxoacyl-(acyl carri 42.6 51 0.0011 35.3 6.0 45 178-222 288-333 (418)
258 TIGR02845 spore_V_AD stage V s 41.9 1.1E+02 0.0024 31.8 8.0 87 178-266 204-305 (327)
259 PRK06066 acetyl-CoA acetyltran 41.7 69 0.0015 34.0 6.8 41 179-224 259-302 (385)
260 PRK06065 acetyl-CoA acetyltran 41.6 3.2E+02 0.007 29.0 11.9 56 395-451 282-355 (392)
261 PLN03171 chalcone synthase-lik 41.0 91 0.002 33.2 7.6 71 172-247 275-360 (399)
262 PLN03172 chalcone synthase fam 40.9 56 0.0012 34.8 6.0 70 173-246 274-349 (393)
263 PRK12404 stage V sporulation p 39.5 1.2E+02 0.0025 31.7 7.6 87 178-266 208-310 (334)
264 PRK00768 nadE NAD synthetase; 39.0 4.2E+02 0.0092 26.7 12.9 109 118-243 3-120 (268)
265 PF00195 Chal_sti_synt_N: Chal 37.9 1.4E+02 0.003 29.4 7.7 68 394-467 119-190 (226)
266 COG1153 FwdD Formylmethanofura 36.4 31 0.00067 30.3 2.6 50 440-496 31-87 (128)
267 TIGR01991 HscA Fe-S protein as 34.3 2.2E+02 0.0048 32.0 9.7 56 167-223 284-339 (599)
268 KOG1394 3-oxoacyl-(acyl-carrie 34.2 43 0.00094 35.1 3.6 46 177-222 302-348 (440)
269 PLN02836 3-oxoacyl-[acyl-carri 33.5 86 0.0019 33.7 6.1 44 178-221 301-345 (437)
270 PRK05183 hscA chaperone protei 33.5 2.2E+02 0.0048 32.2 9.5 50 173-223 306-355 (616)
271 PF07451 SpoVAD: Stage V sporu 33.4 43 0.00093 34.4 3.4 87 178-266 205-307 (329)
272 KOG1389 3-oxoacyl CoA thiolase 33.3 1.2E+02 0.0026 31.3 6.5 69 180-253 324-399 (435)
273 PRK13410 molecular chaperone D 32.3 1.5E+02 0.0032 33.9 8.0 73 167-243 300-372 (668)
274 COG3053 CitC Citrate lyase syn 31.2 3E+02 0.0066 28.3 8.8 106 96-221 209-314 (352)
275 KOG1391 Acetyl-CoA acetyltrans 28.7 70 0.0015 32.1 3.9 49 179-233 296-344 (396)
276 COG2377 Predicted molecular ch 27.5 1.2E+02 0.0025 32.1 5.5 67 166-232 63-141 (371)
277 cd01453 vWA_transcription_fact 26.7 1.7E+02 0.0037 27.3 6.2 82 177-265 28-117 (183)
278 COG2518 Pcm Protein-L-isoaspar 26.5 63 0.0014 31.4 3.1 39 434-474 51-89 (209)
279 PRK08142 acetyl-CoA acetyltran 25.5 82 0.0018 33.4 4.1 40 178-222 257-297 (388)
280 PLN03184 chloroplast Hsp70; Pr 24.9 2.3E+02 0.0049 32.5 7.8 68 172-243 342-409 (673)
281 PRK08329 threonine synthase; V 24.5 72 0.0016 33.2 3.4 63 409-471 276-345 (347)
282 PRK07103 polyketide beta-ketoa 24.2 1.6E+02 0.0035 31.3 6.1 24 179-202 284-307 (410)
283 TIGR03844 cysteate_syn cysteat 24.2 1.5E+02 0.0033 31.5 5.9 65 408-472 310-382 (398)
284 CHL00094 dnaK heat shock prote 23.9 2.4E+02 0.0053 31.8 7.7 47 176-223 309-355 (621)
285 PRK00290 dnaK molecular chaper 23.3 2.6E+02 0.0056 31.6 7.8 54 169-223 300-353 (627)
286 PTZ00186 heat shock 70 kDa pre 23.1 3.2E+02 0.0068 31.3 8.4 62 178-243 336-397 (657)
287 TIGR02350 prok_dnaK chaperone 22.5 2.4E+02 0.0051 31.6 7.3 55 167-222 296-350 (595)
288 PLN02854 3-ketoacyl-CoA syntha 22.5 4E+02 0.0086 29.6 8.7 42 178-223 387-434 (521)
289 PRK13411 molecular chaperone D 20.9 2.7E+02 0.0059 31.7 7.4 48 174-222 306-353 (653)
290 PTZ00009 heat shock 70 kDa pro 20.1 3.1E+02 0.0068 31.2 7.7 44 178-222 315-358 (653)
No 1
>PLN02192 3-ketoacyl-CoA synthase
Probab=100.00 E-value=3.5e-120 Score=962.62 Aligned_cols=496 Identities=70% Similarity=1.166 Sum_probs=476.2
Q ss_pred ccccccCCCCcccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHhhhhHHHHHHHHHHHHHH
Q 010687 9 VQIRQSRRLPDFLQSVNLKYVKLGYHYLMTHLLTLLLVPLMAVIIIEASQMNPDDMHQLWLHLKYNLVSVIICSAVLVFG 88 (504)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (504)
..+++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++++|++.+|..+++++++++.++++++++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (511)
T PLN02192 11 IEPSSSRKLPDFKKSVKLKYVKLGYHYLITHGMYLFLSPLVVVIAAQLSTFSIQDLHDLWEHLKFNLISVILCSTLLVFL 90 (511)
T ss_pred cccchhhhcchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33477999999999999999999999999999999999999889999999999999889988888899998888888899
Q ss_pred HHHHHhcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHH
Q 010687 89 STVYIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMA 168 (504)
Q Consensus 89 ~~~~~~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~ 168 (504)
+++|+|+||++||++||+||+|+++++++.+.|+|+....|.|++++++||+|+++|||++++||+|+..++.|++.+|+
T Consensus 91 ~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sglg~~t~~p~~~~~~~~~~~~~ 170 (511)
T PLN02192 91 STLYFLTRPRPVYLVDFSCYKPDDSRKCTRKIFMDRSKLTGSFTEENLEFQRKILERSGLGESTYLPEAVLNVPPNPCMA 170 (511)
T ss_pred HHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCcccCChhhccCCCCccHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHH
Q 010687 169 AAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKD 248 (504)
Q Consensus 169 ~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~ 248 (504)
++|+|+++++++|+++||+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+||++||++|++
T Consensus 171 ~~~~Ea~~~~~~Aa~~aL~kaGi~p~DIDiLIv~~S~~~~~PSlaa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~ 250 (511)
T PLN02192 171 EARKEAETVMFGAIDQLLAKTSVKPKDIGILIVNCSLFNPTPSLSAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKH 250 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCchHHHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999998999999999999999999999999
Q ss_pred HHhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceee
Q 010687 249 MLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQ 328 (504)
Q Consensus 249 lL~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~ 328 (504)
+|+++++++||||++|++|.+||.++||+++++|++|||||||+||++++.++++++|++.+.++++.++|++.|+|+++
T Consensus 251 lL~a~~~~~aLVVstE~~S~n~y~g~drs~lv~n~LFgDGAaAvLLs~~~~~~~~~k~~L~~~vrt~~~~dd~~~~~v~~ 330 (511)
T PLN02192 251 LLQVHPNSYALVISMENITLNWYFGNDRSMLVSNCLFRMGGAAILLSNKRSDRRRSKYQLVHTVRTHKGADDKCFACVTQ 330 (511)
T ss_pred HHHcCCCCeEEEEEEEeccccCCCCCCHHHHhccccccccceEEEEeccccccccccceeeeeEEEEecCChhhccceec
Confidence 99999999999999999999999999999999999999999999999976555567899999999999999999999999
Q ss_pred cccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCCCHH
Q 010687 329 EQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRA 408 (504)
Q Consensus 329 ~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~g~~ 408 (504)
++|++|+.|+.|+||+|.+++++++.|++++||.++|.+|+.++++++.++++++.+++.|+|+++.+|||||+||+|++
T Consensus 331 ~ed~~g~~g~~Lskdl~~vag~al~~ni~~l~p~vlp~~e~~~~~~~m~gr~vfk~~~~~~~p~~~~~Idhf~iHqggr~ 410 (511)
T PLN02192 331 EEDSAGKIGVSLSKDLMAVAGDALKTNITTLGPLVLPMSEQLLFFATLVGKKLFKMKLKPYIPDFKLAFEHFCIHAGGRA 410 (511)
T ss_pred ccccccceeeEecchhhhhhhhhhhhhhhhcccccCccchhhceeEEEcChHHHHHHhhhccHHHHHhhceEeeccCCHH
Confidence 99999999999999999999999999999999999999999988888889999998888899999999999999999999
Q ss_pred HHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeeccCCCCC-
Q 010687 409 VIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVKPSP- 487 (504)
Q Consensus 409 vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~~~~- 487 (504)
+++.++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||+++++++.
T Consensus 411 IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSaSI~~aL~~~eakgrik~GDrVl~iaFGsGf~~~sav~~~~~~~~~~~~ 490 (511)
T PLN02192 411 VLDELEKNLQLSDWHMEPSRMTLYRFGNTSSSSLWYELAYSEAKGRIKKGDRTWQIAFGSGFKCNSAVWKALRTVNPAKE 490 (511)
T ss_pred HHHHHHHHcCCCchhhhHHHHHHhHcCChHHhHHHHHHHHHHHcCCCCCCCEEEEEEEcchHhhhhhheeeecccCCccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998754
Q ss_pred CCCCccccccCCCCCCC
Q 010687 488 NSPWEDCIDKYPVQTVT 504 (504)
Q Consensus 488 ~~~w~~~~~~~p~~~~~ 504 (504)
+|||+||||+|||++|.
T Consensus 491 ~~~w~~~i~~yp~~~~~ 507 (511)
T PLN02192 491 KNPWMDEIHEFPVDVPK 507 (511)
T ss_pred CCCchhhHHhCCCCCCC
Confidence 49999999999999984
No 2
>PLN02854 3-ketoacyl-CoA synthase
Probab=100.00 E-value=5.9e-119 Score=955.09 Aligned_cols=499 Identities=61% Similarity=1.066 Sum_probs=475.1
Q ss_pred CCcccccccCCCCcccccccchhhhhhhHHHHHHH---HHHHHHHHHHHHHHHHhcCChhhHHHHHHH--hhhhHHHHHH
Q 010687 6 GGGVQIRQSRRLPDFLQSVNLKYVKLGYHYLMTHL---LTLLLVPLMAVIIIEASQMNPDDMHQLWLH--LKYNLVSVII 80 (504)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 80 (504)
...+++++|++||||++|+|+||||+||||+++|+ ++++++|++++++.++.+++++|++.+|.. ++++++++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (521)
T PLN02854 15 SSSAVIKIRQRLPDFLQSVKLKYVKLGYGYSCNPATILFFLIILPLTIATLVQITGLEFDTVSELWSNQALHLDTATRLT 94 (521)
T ss_pred CcceecchhhhCchHHHhhcceeeecchHHHHhhhHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHhhhHHhHHHHHH
Confidence 34677899999999999999999999999999999 667889998888999999999999889987 7888999999
Q ss_pred HHHHHHHHHHHHHhcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcC
Q 010687 81 CSAVLVFGSTVYIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHY 160 (504)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~ 160 (504)
+++++++++++|+|+||++||++||+||+|+++++++.+.|+|+....|.|++++++||+||++|||++++||+|+..++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~sg~g~~ty~P~~~~~ 174 (521)
T PLN02854 95 GSAFLLFLLGLYWAKRSKPVYLVDFACYKPEDERKISVDSFLTMTEENGSFEDETVQFQRRISTRSGLGDETYLPRGITS 174 (521)
T ss_pred HHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHhcCCCCccccCccccC
Confidence 98999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHH
Q 010687 161 LPPRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGV 240 (504)
Q Consensus 161 ~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l 240 (504)
.||+.+|+++|+|++++++.|+++||+++|++|+|||+||++||+++++|+++++|+++||+++++.+|||+||||+||+
T Consensus 175 ~~~~~~~~~~r~ea~~v~~~~~~~lL~kaGi~p~dID~LIv~cS~~~p~PSlAa~I~n~LGlr~~i~afdLsgmGCSggl 254 (521)
T PLN02854 175 RPPNLCMEEARAEAEAVMFGALDSLFSKTGVKPRDIGILIVNCSLFNPTPSLSAMIVNHYKLRTDIKSYNLGGMGCSAGL 254 (521)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCCCceEEecccchhhhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999989999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCC
Q 010687 241 IAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADD 320 (504)
Q Consensus 241 ~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~ 320 (504)
+||++|+++++++++++||||++|++|.+||.++||++++++++|||||||+||++++.++++++|+|.++++++.++|+
T Consensus 255 ~aL~lA~~lL~~~~~~~aLVVstE~~S~~~y~g~Drs~lv~~~LFgDGAAAvlLs~~~~~~~~~k~~L~~~v~t~~~ad~ 334 (521)
T PLN02854 255 ISIDLANDLLKANPNSYAVVVSTENITLNWYFGNDRSMLLCNCIFRMGGAAVLLSNKARDRKRSKYQLVHTVRTHKGADD 334 (521)
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeecCCCCCCchhhhcceeeeccceeEEEEecccccccccchheeeEEEEEEeeCC
Confidence 99999999999999999999999999999999999999999999999999999999764445678999999999999999
Q ss_pred ccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEE
Q 010687 321 NAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHF 400 (504)
Q Consensus 321 ~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~ 400 (504)
+.|+|+++++|+.|..|+++++++|.+++++++.|++++||.|+|++|+++|+...+.+.+.+.++++|+|||++|||||
T Consensus 335 ~~~~~i~~~~d~~G~~g~~lsk~l~~va~~~l~~~i~~~g~~Vl~~se~~~f~~~~i~~~L~~~gl~~~~pd~~~didhf 414 (521)
T PLN02854 335 KNYNCVYQREDDKGTIGVSLARELMAVAGDALKTNITTLGPLVLPLSEQFMFFVTLVRRKLLKAKVKPYIPDFKLAFEHF 414 (521)
T ss_pred CccCeEEeccCCCCcccccccccccchhhhhhhhhhhhccccccchHHHHHHHHHHHHHHHHHcCCCccCCcccccCcEE
Confidence 99999999998888888999999999999999999999999999999999988887777777778888999999999999
Q ss_pred EEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEee
Q 010687 401 CIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQAL 480 (504)
Q Consensus 401 ~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~ 480 (504)
|+||+|++++++++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|++++|||+
T Consensus 415 ~iHqggr~IId~v~k~LgL~~~~~e~sr~tL~rfGNTSSASI~~~L~~~~~kGrik~GD~Vl~iaFGsGft~~sav~~~~ 494 (521)
T PLN02854 415 CIHAGGRAVLDELQKNLQLSDWHMEPSRMTLHRFGNTSSSSLWYELAYTEAKGRVSAGDRVWQIAFGSGFKCNSAVWKAL 494 (521)
T ss_pred EECCCCHHHHHHHHHHcCCCcccccchHHHhhhcCChHhhHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhhheeeEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCC--CCCCCccccccCCCCCCC
Q 010687 481 RNVKPS--PNSPWEDCIDKYPVQTVT 504 (504)
Q Consensus 481 ~~~~~~--~~~~w~~~~~~~p~~~~~ 504 (504)
+++++. .+|||+||||+|||++|+
T Consensus 495 ~~~~~~~~~~~~w~~~i~~yp~~~~~ 520 (521)
T PLN02854 495 REIPTGESTGNPWADSIDRYPVKVPV 520 (521)
T ss_pred ccCCccccCCCCchhhHhhCCCCCCC
Confidence 999865 579999999999999985
No 3
>PLN02377 3-ketoacyl-CoA synthase
Probab=100.00 E-value=1.3e-116 Score=937.48 Aligned_cols=497 Identities=88% Similarity=1.392 Sum_probs=474.7
Q ss_pred CCcccccccCCCCcccccccchhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHhhhhHHHHHHHHHHH
Q 010687 6 GGGVQIRQSRRLPDFLQSVNLKYVKLGYHYLMTHLLTLLLVPLMAVIIIEASQMNPDDMHQLWLHLKYNLVSVIICSAVL 85 (504)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (504)
+.+++|++|++||||++|+|+||||+||||+++|+++++++|++++++.++.+++.+|++.+|..+++++++++++++++
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (502)
T PLN02377 4 GGEIRIHQTRMLPDFLQSVNLKYVKLGYHYLISNLLTLCFIPLIIIISIEASQMNPDDLRQLWIHLQYNLVSIIICSAFL 83 (502)
T ss_pred CceEEEeehhhCchHHHhhhhhhhhhhhHHHHhhhHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999999999999999999999999999999999999889999999999999889988888889988888888
Q ss_pred HHHHHHHHhcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCC
Q 010687 86 VFGSTVYIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRP 165 (504)
Q Consensus 86 ~~~~~~~~~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~ 165 (504)
++++++|+|+||++||++||+||+|++++++|.+.|+|+....|.|++++++||+||++++||++++|+|+..++.|++.
T Consensus 84 ~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ri~~~sgig~~t~~p~~~~~~~~~~ 163 (502)
T PLN02377 84 VFGLTVYIMTRPRPVYLVDYSCYRAPDHLKAPFARFMEHSRLTGDFDDSSLEFQRKILERSGLGEDTYVPEAMHYIPPRP 163 (502)
T ss_pred HHHHHHHHHcCCCCEEEEeeeeecCCccccccHHHHHHHHHHhCCCCHHHHHHHHHHHHhcCCCCccccCchhccCCccc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHH
Q 010687 166 SMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDL 245 (504)
Q Consensus 166 ~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~l 245 (504)
+|+++|+|+++++++|+++||+++|++|+|||+||++||+++++||++++|+++||+++++.+|||+||||+||++||++
T Consensus 164 ~~~~~~~ea~~l~~~A~~~aL~kaGi~p~dID~LVv~cS~~~~~PSlaa~V~~~LGlr~~v~afdL~gmGCsggl~aL~l 243 (502)
T PLN02377 164 SMAAAREEAEQVMFGALDNLFANTNVNPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDL 243 (502)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhCCCCCCeEEecccchhhHHHHHHHH
Confidence 99999999999999999999999999999999999989999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccc
Q 010687 246 AKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKC 325 (504)
Q Consensus 246 A~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~ 325 (504)
|+++++++++++||||++|++|.+|+.++++++++++++|||||||+||++++.++++++|++.++++++.++|++.|+|
T Consensus 244 A~~ll~~~~~~~aLVVstE~~S~~~~~~d~~s~lv~n~LFgDGAaAvlLs~~~~~~~~a~~~l~~iv~t~~~~d~~~~~~ 323 (502)
T PLN02377 244 AKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKSRDKRRSKYKLVHVVRTHRGADDKAFRC 323 (502)
T ss_pred HHHHHHcCCCCEEEEEEEeccccccCCCCCccccccceeeccccEEEEEecccccccccccccceEEEEEEEEcCCccce
Confidence 99999999999999999999999998888889999999999999999999976555567899999999999999999999
Q ss_pred eeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCC
Q 010687 326 VYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAG 405 (504)
Q Consensus 326 ~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~ 405 (504)
+++++|+.|+.|+++++++|++++++++.|++++||.|+|++||+.++.....+++++..++++.|++++||||||+||+
T Consensus 324 i~~~~d~~G~~g~~ls~dl~~v~g~~l~~~i~~lg~~vl~~se~~~~~a~~~~~~~~~~~l~~~~p~~~~didhf~iHqg 403 (502)
T PLN02377 324 VYQEQDDAGKTGVSLSKDLMAIAGEALKTNITTLGPLVLPISEQLLFFATLVVKKLFNKKMKPYIPDFKLAFDHFCIHAG 403 (502)
T ss_pred eeeccccCCCCCCCCCcchhhHhhHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhhccCCcHhhcCEEEECCC
Confidence 99999888888999999999999999999999999999999999988777667788887777788899999999999999
Q ss_pred CHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeeccCCC
Q 010687 406 GRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVKP 485 (504)
Q Consensus 406 g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~~ 485 (504)
|++++++++++||++++++++|+++++|||||||||+||+|++++++|++++||+|||+|||+||+|+++||||++++++
T Consensus 404 gr~IId~v~k~LgL~~~~~e~sr~tL~r~GNTSSaSI~~aL~~~~~~grik~Gd~VlliaFGsGf~~~s~v~~~~~~~~~ 483 (502)
T PLN02377 404 GRAVIDELEKNLQLLPVHVEASRMTLHRFGNTSSSSIWYELAYIEAKGRMRKGNRVWQIAFGSGFKCNSAVWEALRHVKP 483 (502)
T ss_pred CHHHHHHHHHHcCCCcccchHHHHHHHhcCCchhhHHHHHHHHHHHcCCCCCCCeEEEEEEccccEeeeEEEEEecCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCCCCCccccccCCCCC
Q 010687 486 SPNSPWEDCIDKYPVQT 502 (504)
Q Consensus 486 ~~~~~w~~~~~~~p~~~ 502 (504)
+.+|||+||||+|||++
T Consensus 484 ~~~~~w~~~i~~yp~~~ 500 (502)
T PLN02377 484 SNNSPWEDCIDKYPVKL 500 (502)
T ss_pred CCCCCchhhHhhCCCcc
Confidence 77899999999999986
No 4
>PLN02932 3-ketoacyl-CoA synthase
Probab=100.00 E-value=4.5e-109 Score=875.00 Aligned_cols=470 Identities=64% Similarity=1.096 Sum_probs=448.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCChhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCC
Q 010687 34 HYLMTHLLTLLLVPLMAVIIIEASQMNPDDMHQLWLHLKYNLVSVIICSAVLVFGSTVYIMTRPRSIYLVDFSCYRPPSH 113 (504)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~~~P~~~ 113 (504)
.|+++|+++++++|++++++.++.+++.+|++.+|..++.++++++.+++++++++++|+|+||++||++||+||+|+++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyl~d~~c~~p~~~ 81 (478)
T PLN02932 2 NYLMAHRFKLCFLPLMVGIAMEASRLSTQDLQNFYLYLQNNLTSLTMFFLYLALGSTLYLMTRPKPVYLVDFSCYLPPSH 81 (478)
T ss_pred hhHHHhHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeeeecCccc
Confidence 57899999999999999999999999999998899888888889888888888999999999999999999999999999
Q ss_pred ceechHHHHHHhhhc---CCCChhh---HHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHH
Q 010687 114 LQVKFHQFMEHSRLT---GDFDESS---LEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVMFGALDNLFA 187 (504)
Q Consensus 114 ~~vt~~~~~~~~~~~---~~~~~~~---~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 187 (504)
+++|.+.++++.... |.|++++ ++||+||++||||++|||+|+..++.|++.+|+++|+|+++++++|+++||+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~i~~rsGig~~t~~p~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~ 161 (478)
T PLN02932 82 LKASIQTIMGHVRRVREAGAWKQESDYLMDFCEKILERSGLGQETYIPEGLQCLPLQQNLAVSRKETEEVIIGAVDNLFR 161 (478)
T ss_pred ccccHHHHHHHHHhhcccCCCCccchhHHHHHHHHHHHcCCCCceeeccccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998665 7898888 9999999999999999999999988899999999999999999999999999
Q ss_pred hCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCc
Q 010687 188 NTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENIT 267 (504)
Q Consensus 188 ~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S 267 (504)
++|++|+|||+||++|++++++|+++++|+++||+++++.+|||+||||+||++||++|+++++++++++||||++|.+|
T Consensus 162 ~agi~p~dId~lIv~tst~~~~Pslaa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S 241 (478)
T PLN02932 162 NTGISPSDIGILVVNSSTFNPTPSLSSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENIT 241 (478)
T ss_pred HcCCCHHHCCEEEEEccCCCCCCcHHHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecc
Confidence 99999999999999998888999999999999999989999999999999999999999999999999999999999999
Q ss_pred CCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCcccccchhHHHH
Q 010687 268 QNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAI 347 (504)
Q Consensus 268 ~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v 347 (504)
.+||.+++|+|++++++|||||||+||++++.++++++|++.++++++.++|++.|+|+++++|++|..|+.|++++|.+
T Consensus 242 ~~~~~~d~r~~l~t~~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v~t~~~ad~~~~~~v~~~~d~~G~~g~~Lsk~lp~~ 321 (478)
T PLN02932 242 QNLYLGNNKSMLVTNCLFRIGGAAILLSNRSRDRKRAKYELVHTVRVHTGADDRSYECATQEEDEDGIVGVSLSKNLPMV 321 (478)
T ss_pred cccCCCcchhhhccceeecccceEEEEecccccccCcceEEEeeeeeeeccCCCccccceeecccCCcceeeECccchHH
Confidence 99998888999999999999999999999775444679999999999999999999999999998898999999999999
Q ss_pred HHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCCCHHHHHHHHHHcCCCchhhhhh
Q 010687 348 AGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEAS 427 (504)
Q Consensus 348 ~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S 427 (504)
+++++|.||+++||.|+|++|+++++++++++++++.+.+.|.|+++++|||||+||+|++++++++++||++++++++|
T Consensus 322 ~~~al~~ni~~~~p~v~p~~e~~~~~~~~~~~~~~k~~~~~~~~~~~~~id~f~iHqggr~IIdav~k~LgL~~~~~e~s 401 (478)
T PLN02932 322 AARTLKINIATLGPLVLPLSEKFHFFVRFVKKKFFNPKLKHYIPDFKLAFEHFCIHAGGRALIDEMEKNLHLTPLDVEAS 401 (478)
T ss_pred HHHHHhhhhhccccccccchhhhHHHHHHhHHHHHHHHhhcCcHhHHhhhceEEEccCCHHHHHHHHHHcCCChHHHHHH
Confidence 99999999999999999999999999999999999888888899999999999999999999999999999999999999
Q ss_pred hhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeeccCCCCCCCCCccccccCCCCCC
Q 010687 428 RMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVKPSPNSPWEDCIDKYPVQTV 503 (504)
Q Consensus 428 ~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~~~~~~~w~~~~~~~p~~~~ 503 (504)
+++++|||||||||+||+|++++++|++++||+|||+|||+||+||++|||++|+++++.+|||+||||+|||++.
T Consensus 402 ~~tL~rfGNTSSaSI~~~L~~~ea~grik~Gd~vl~iaFGsGf~~~s~vw~~~~~~~~~~~~~w~~~i~~yp~~~~ 477 (478)
T PLN02932 402 RMTLHRFGNTSSSSIWYELAYTEAKGRMKKGDRIWQIALGSGFKCNSSVWVALRNVKPSANNPWEDCLHKYPVEID 477 (478)
T ss_pred HHHHHHhCChhhhHHHHHHHHHHHcCCCCCCCEEEEEEEeccHHHHHHHHHHhcCCCCcCCCCchhhHhhCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999988778999999999999863
No 5
>PLN00415 3-ketoacyl-CoA synthase
Probab=100.00 E-value=2.3e-99 Score=792.16 Aligned_cols=430 Identities=54% Similarity=0.981 Sum_probs=407.4
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceE
Q 010687 73 YNLVSVIICSAVLVFGSTVYIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEET 152 (504)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~ 152 (504)
+.+..+-+.++++++++++|+++||++||++||+||+|++++++|.+.++++....|.|++++++||+||+++|||++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vylvd~~c~~p~~~~~~~~~~~~~~~~~~~~~~~~s~~F~~~i~~rSGlg~et 112 (466)
T PLN00415 33 FSPFPVKIGLLLISIFFYAYSTTRSKPVYLVDFSCHQPTDSCKISSETFFNMAKGAQLYTEETIQFMTRILNRSGLGDDT 112 (466)
T ss_pred CChhHHHHHHHHHHHHHHHHHHcCCCcEEEEeeeeecCCccccccHHHHHHHHHHcCCCCHHHHHHHHHHHHHcCCCCCe
Confidence 34454555556666777899999999999999999999999999999999999999999999999999999999999999
Q ss_pred eccCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEec
Q 010687 153 YVPDAMHYLPPRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLG 232 (504)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~ 232 (504)
|.|+..++.|+..+|+++|+|+++.++.|++++|+++|++|+|||+||++||+++++|+++++|+++||+++++.+||++
T Consensus 113 ~~p~~~~~~~~~~~~~~~~~e~em~i~~A~~~aL~~aGi~p~dID~LIvs~T~~~~~Pslaa~l~~~LGLr~~v~~~dL~ 192 (466)
T PLN00415 113 YSPRCMLTSPPTPSMYEARHESELVIFGALNSLFKKTGIEPREVGIFIVNCSLFNPNPSLSSMIVNRYKLKTDVKTYNLS 192 (466)
T ss_pred eeCCccccCCCCCChhhhHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCCCchHHHHHHHHhCCCCCceEEEec
Confidence 99999999999999999999999999999999999999999999999988888889999999999999999999999999
Q ss_pred CCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEE
Q 010687 233 GMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVV 312 (504)
Q Consensus 233 g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v 312 (504)
||||+|+++||++|+++++++++++||||++|.+|.++|+++|+++++++++|||||||+||++++.++++++|+|.+++
T Consensus 193 gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~~~~~dr~~lv~n~LFgDGAAAvlLs~~~~~~~~~~~~L~~~v 272 (466)
T PLN00415 193 GMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSMYRGNDRSMLVPNCLFRVGGAAVMLSNRSQDRVRSKYELTHIV 272 (466)
T ss_pred cccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccccCCCcHhHhccceeecccceEEEEecCcccccCccceeeeEE
Confidence 99999999999999999999999999999999999988899999999999999999999999998766566899999999
Q ss_pred EEeecCCCccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccC
Q 010687 313 RTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPD 392 (504)
Q Consensus 313 ~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~ 392 (504)
+++.+.+++.|.|++|.+|++|..|+.|+|++|.+++++++.|+++++|.++|++|+++|....+.+++++...+.|+||
T Consensus 273 rt~~~~~d~~~~~~~~~~d~~G~~gv~Lsk~lp~va~~~l~~ni~~l~p~vlp~~e~~~~~~~~i~~~~~~~~~~~~~pd 352 (466)
T PLN00415 273 RTHKGSSDKHYTCAEQKEDSKGIVGVALSKELTVVAGDTLKTNLTALGPLVLPLSEKLRFILFLVKSKLFRLKVSPYVPD 352 (466)
T ss_pred EecCCCChhhhcceeeeecCCCcceEEEChHHHHHHHHHHHHHHHHhhhhccchHHHHHHHHHHHhhhhhhccCCCCCCC
Confidence 99998889999999999999999999999999999999999999999999999999999998888888888777789999
Q ss_pred cccccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHh
Q 010687 393 FKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKC 472 (504)
Q Consensus 393 ~~~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~ 472 (504)
++..++|||+|+||++|+++++++|||+++++++||++|+|||||||+|+||+|+++++++++++||++||+|||+||+|
T Consensus 353 ~~~~~~hf~iHpGGraVLdave~~LgL~~~~le~Sr~vL~r~GN~SSsSV~yvL~~~~~~~~~~~Gdrvl~iaFGpGf~~ 432 (466)
T PLN00415 353 FKLCFKHFCIHAGGRALLDAVEKGLGLSEFDLEPSRMTLHRFGNTSSSSLWYELAYVEAKCRVKRGDRVWQLAFGSGFKC 432 (466)
T ss_pred ccccceeEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhhhHHHHHHHHHhhccCCCCCEEEEEEEcCcchh
Confidence 98889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hheeeEeeccCCCCCC---CCCccccccCCCCC
Q 010687 473 NSAVWQALRNVKPSPN---SPWEDCIDKYPVQT 502 (504)
Q Consensus 473 ~sav~r~~~~~~~~~~---~~w~~~~~~~p~~~ 502 (504)
+++|||++++++++.+ |||+||||+|||++
T Consensus 433 es~v~~~~~~~~~~~~~~~~~w~~~i~~yp~~~ 465 (466)
T PLN00415 433 NSIVWRALRTIPANESLVGNPWGDSVHKYPVHV 465 (466)
T ss_pred hHhHHHHhccCCcccccCCCCchhhHHhCCCCC
Confidence 9999999999986543 99999999999975
No 6
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species. The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane
Probab=100.00 E-value=3.7e-77 Score=588.44 Aligned_cols=290 Identities=70% Similarity=1.173 Sum_probs=284.4
Q ss_pred HHhcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHH
Q 010687 92 YIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAR 171 (504)
Q Consensus 92 ~~~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~ 171 (504)
|+|+||++||++||+||+|++++++|.+++++++...+.|++++++||+||++++||+++||+|+..++.|++.+++++|
T Consensus 1 y~~~R~r~VYLvDfac~kP~~~~~v~~~~~~e~~~~~~~f~~~sl~F~~kIlerSGlG~eTy~P~~~~~~p~~~s~~~a~ 80 (290)
T PF08392_consen 1 YFMRRPRPVYLVDFACYKPPDELRVSREEFIEHARRCGRFDEESLDFQRKILERSGLGDETYLPPALHEIPPDPSLAAAR 80 (290)
T ss_pred CccCCCCCEEEEeeeecCCCcccccCHHHHHHHHHhcccCChhHHHHHHHHHHhcCCCccccCCcccccCCCcccHHHHH
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+|++++++.|++++|+|+|++|+|||+||+|||.|+++||+++||+|+|||++|+.+|||+||||||++++|++|++||+
T Consensus 81 ~Eae~v~f~av~~LL~ktgv~p~dIdiLVvncs~f~ptPSLsamIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~ 160 (290)
T PF08392_consen 81 EEAEMVIFGAVDDLLAKTGVKPSDIDILVVNCSLFNPTPSLSAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQ 160 (290)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECcCCCcCCcHHHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeeccc
Q 010687 252 VHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQD 331 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d 331 (504)
.+|+.+||||++|++|.+||.|+||+|+++||||||||||+||||++.+++++||+|.|++|||.++||++|+|++|+||
T Consensus 161 ~~p~~~ALVVstE~~s~~~Y~G~~rsmlv~NcLFr~GgAAvLLSn~~~~~~~aky~L~~~vRt~~g~~d~ay~~v~q~eD 240 (290)
T PF08392_consen 161 AHPNSYALVVSTENISANWYRGNDRSMLVSNCLFRMGGAAVLLSNKPSDRRRAKYELLHTVRTHTGADDDAYRCVFQEED 240 (290)
T ss_pred hCCCcEEEEEEEeecccccccCCcHHHhhccccccCCceeEEeecCccccccchhhhhheeeeecCCCCCceeeEEEeEc
Confidence 99999999999999999999999999999999999999999999999998999999999999999999999999999999
Q ss_pred CCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHH
Q 010687 332 NAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKF 381 (504)
Q Consensus 332 ~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~v 381 (504)
++|..|++|+||++.++++++|.||+++||+|||++||++|+++++.+|+
T Consensus 241 ~~g~~Gv~lsk~l~~vag~al~~ni~~l~p~vLP~sE~~~~~~~~~~rk~ 290 (290)
T PF08392_consen 241 EEGIVGVSLSKDLMKVAGKALKANITTLGPLVLPLSEQLRFAASFIARKV 290 (290)
T ss_pred CCCceEEEEecchHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999998877653
No 7
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=100.00 E-value=1.6e-56 Score=452.63 Aligned_cols=317 Identities=21% Similarity=0.315 Sum_probs=265.9
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQV 177 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 177 (504)
.+++|.++|+|+|+ ++++|+++.+.... ++| ||..++||++||++.+++. ..+|
T Consensus 2 ~~a~i~g~G~~lP~--~~vtn~d~e~~~~t----sde------wI~~rtGir~R~~a~~~e~--------------~s~l 55 (323)
T COG0332 2 MNAKILGIGSYLPE--RVVTNADLEKRVDT----SDE------WIETRTGIRERRIAADDET--------------TSDL 55 (323)
T ss_pred CcceEEEEEeecCC--cccChHHHHhccCC----Ccc------eeeeecCCceeeecCCCcc--------------HHHH
Confidence 46899999999999 99999999866553 555 7999999999999988764 7899
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNT 256 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~ 256 (504)
+++|+++||+++|++|+|||+||++| +|++++|+++++||++||+. ++.+||++ .+|+|+++||++|.+++++|.++
T Consensus 56 a~~Aa~~AL~~Agi~~~dIDlII~aT~tpd~~~Ps~A~~vq~~LG~~-~~~afDl~-aaCsgf~yaL~~A~~~i~sG~~k 133 (323)
T COG0332 56 AVEAARKALEDAGISPDDIDLIIVATSTPDHLFPSTACLVQARLGLG-GAPAFDLQ-AACSGFLYALSVADGLIRSGGYK 133 (323)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCcccCCChHHHHHHHHhCCC-Ccceeech-hhhHHHHHHHHHHHHHHHcCCCC
Confidence 99999999999999999999999996 68899999999999999999 59999999 79999999999999999999999
Q ss_pred eEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCc
Q 010687 257 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKT 336 (504)
Q Consensus 257 ~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 336 (504)
+||||++|++|+ +.+++||. +..+|||||+|+||++.+.+. ++..++.++|+..++.++.+......
T Consensus 134 ~vLVVg~e~~S~-~ld~~dR~---t~vlFgDGAgAvvl~~~~~~~--------~i~~~~l~sdg~~~~~l~~~~~~~~~- 200 (323)
T COG0332 134 NVLVVGAETLSR-ILDWTDRD---TCVLFGDGAGAVVLEATEDDN--------GILDTDLGSDGSQGDLLYLPGGGSAT- 200 (323)
T ss_pred EEEEEehhHhhc-cCCHhhcc---ceEEEcCCceEEEEecCCCCc--------CeeeeeeeccccCCCeeeccCCCCcc-
Confidence 999999999998 67888997 678999999999999987321 46778889999998888776542211
Q ss_pred ccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHH---HHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHH
Q 010687 337 GVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLV---AKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDE 412 (504)
Q Consensus 337 g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~---~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~ 412 (504)
.+.... ...+.+.|+.| +++...++ .+++++ .++. .+|||+|++||.|.++++.
T Consensus 201 ----~~~~~~------~~~~~m~Gr~v------fk~av~~~~~~~~~~L~~~~l~------~~dId~~vpHQan~ri~~~ 258 (323)
T COG0332 201 ----PKEESG------GGLLVMDGREV------FKFAVRAMPKAIEEVLEKAGLT------PEDIDWFVPHQANLRIIEA 258 (323)
T ss_pred ----cccccc------ccceeeccHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEccccccHHHHHH
Confidence 000000 11233344332 33333322 133332 2333 4899999999999999999
Q ss_pred HHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEee
Q 010687 413 LEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQAL 480 (504)
Q Consensus 413 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~ 480 (504)
++++|+++++|+ ..++++|||||+||+|+.|+++.++|++|+||++++.+||+|++|+++++||.
T Consensus 259 i~~~l~~~~~k~---~~~~~~yGNtsaAsiplaL~~~~~~g~ik~Gd~ill~~fG~Gltwg~~~~r~~ 323 (323)
T COG0332 259 IAKKLGIPEEKV---VVTVDKYGNTSAASIPLALDEALREGRIKPGDLVLLEAFGGGLTWGAALVRWG 323 (323)
T ss_pred HHHHcCCCHHHH---hhHHHHhcccccchHHHHHHHHhhhCCCCCCCEEEEEeecCcceeeeEEEEeC
Confidence 999999999999 68999999999999999999999999999999999999999999999999984
No 8
>PLN03172 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.4e-51 Score=431.87 Aligned_cols=348 Identities=18% Similarity=0.239 Sum_probs=271.9
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCCC-ChhhHHH-HHHHHHHhCCCceEeccC-C---CcC-----C-CC-C
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDF-DESSLEF-QRKILERSGLGEETYVPD-A---MHY-----L-PP-R 164 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~-~~~~~~f-~~~i~~~sGi~~r~~~~~-~---~~~-----~-~~-~ 164 (504)
.+++|.++|+..|+ +.++++++.+.......- +...++. +++|++++||++|+..-+ + .+. . |+ .
T Consensus 15 ~~~~I~~igta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (393)
T PLN03172 15 GPATILAIGKATPA--NCVSQADYPDYYFRITNSEHMTELKEKFKRMCDKSMIKKRYMHLTEEILKENPNMCAYMAPSLD 92 (393)
T ss_pred CCeEEEEEEecCCC--ccccHHHHHHHHHHHhcccCchHHHHHHHHHHHhcCCCceeEeccchhhhhCccccccCCCCHH
Confidence 56899999999999 899999999987643210 1112332 577999999999987542 1 110 0 11 3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE-EecCCcchHHHHHH
Q 010687 165 PSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF-NLGGMGCSAGVIAI 243 (504)
Q Consensus 165 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~-dl~g~gCsg~l~aL 243 (504)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++.++ +++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~aL~~ag~~~~dId~ii~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (393)
T PLN03172 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLKPSVKRFMMYQ-QGCFAGGTVL 171 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcCchHHHHHHHHhCCCCCceEEeeeC-CchHHHHHHH
Confidence 46778899999999999999999999999999999988765556999999999999999878664 556 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCc--CccccccccccccEEEEEecccccc-ccccceEeeEEEEee-cCC
Q 010687 244 DLAKDMLQVHRNTYAVVVSTENITQNWYFGNKK--SMLIPNCLFRVGGSAVLLSNKAKDR-RRAKYKLVHVVRTHK-GAD 319 (504)
Q Consensus 244 ~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr--~~l~~~~lfgDGAaA~LLs~~~~~~-~~~~~~l~~~v~t~~-~~d 319 (504)
++|++++++++.++||||++|.+|.++.+++|+ +.++++++|||||+|+||++++... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvVl~~~~~~~~~~~~~~i~~~~~~~~~~t~ 251 (393)
T PLN03172 172 RLAKDLAENNAGSRVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAVIIGADPDTKIERPLFEIVSAAQTILPDSD 251 (393)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhhhcccccccHHhhhccchhcCceEEEEEecCCCCcccCceeEEeeeccEEecCCc
Confidence 999999999999999999999999766555553 4567889999999999999865421 234567766544433 444
Q ss_pred CccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccC
Q 010687 320 DNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFD 398 (504)
Q Consensus 320 ~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did 398 (504)
+.....+.. .| .++.+++++|..+.+.++..+ +++++ ..+. ..|++
T Consensus 252 ~~~~~~i~~----~G-~~~~l~~~vp~~~~~~i~~~~----------------------~~~L~~~gl~------~~di~ 298 (393)
T PLN03172 252 GAIDGHLRE----VG-LTFHLLKDVPGLISKNIEKSL----------------------VEAFAPIGIN------DWNSI 298 (393)
T ss_pred ccccceEEc----CC-cEEEEechHHHHHHHHHHHHH----------------------HHHhhhcCCC------ccccc
Confidence 433222221 12 356778999987765443322 23332 2222 37999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEeechhHH
Q 010687 399 HFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTE----AKGRMRRG---NRVWQIAFGSGFK 471 (504)
Q Consensus 399 ~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~----~~g~i~~G---d~Vlli~fG~G~~ 471 (504)
+|++||+|+++++.+++.||++++++.+|++++++||||||+|+++.|+++. ++|++++| |++++++||+|++
T Consensus 299 ~~~~Hqgg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t 378 (393)
T PLN03172 299 FWIAHPGGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGKGSTGEGLEWGVLFGFGPGLT 378 (393)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCCCCCCCCcceEEEEEeCCcce
Confidence 9999999999999999999999999999999999999999999999999987 45788787 8899999999999
Q ss_pred hhheeeEeec
Q 010687 472 CNSAVWQALR 481 (504)
Q Consensus 472 ~~sav~r~~~ 481 (504)
++++++||.+
T Consensus 379 ~~~~ll~~~~ 388 (393)
T PLN03172 379 VETVVLHSVP 388 (393)
T ss_pred eeeeeeEecc
Confidence 9999999953
No 9
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=100.00 E-value=1.5e-51 Score=428.57 Aligned_cols=346 Identities=41% Similarity=0.623 Sum_probs=266.3
Q ss_pred eEEEEeeeecCCCCceechHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceEeccC--CCcC-------CCCCCcHH
Q 010687 100 IYLVDFSCYRPPSHLQVKFHQFMEHSRLTGD--FDESSLEFQRKILERSGLGEETYVPD--AMHY-------LPPRPSMA 168 (504)
Q Consensus 100 v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~--~~~~-------~~~~~~~~ 168 (504)
+||.++++|+|+ ++++|+++.+.+..... +.+...++.++|++++||++|+++.+ .+.. .+.+.+.+
T Consensus 2 ~~I~~~~~~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~gI~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (361)
T cd00831 2 ATILAIGTAVPP--HRVPQSELVDFYRRLFSSDHLPELKEKLKRLCAKTGIETRYLVLPGGEETYAPRPEMSPSLDERND 79 (361)
T ss_pred cEEEEEEEeCCC--CcCCHHHhhHHHHhcCChhhhHHHHHHHHHHHhhcceeEEEEEecCchhhcCCccccCCCcCcchh
Confidence 689999999999 89999999998764211 01234556689999999999999875 3211 12356778
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHH
Q 010687 169 AAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKD 248 (504)
Q Consensus 169 ~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~ 248 (504)
.+.+++.+|+.+|++++|+++|++|+|||+||++|++++..|+++.+|+++||+++++.+||++++||+|++.||++|.+
T Consensus 80 ~~~~~~~~la~~Aa~~aL~~a~~~~~~Id~li~~s~~~~~~P~~a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~ 159 (361)
T cd00831 80 IALEEARELAEEAARGALDEAGLRPSDIDHLVVNTSTGNPTPSLDAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKD 159 (361)
T ss_pred hHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECCCCCCCCCHHHHHHHHhCCCcccchhccccccchhHHHHHHHHHH
Confidence 89999999999999999999999999999999998777889999999999999987899999997899999999999999
Q ss_pred HHhcCCCCeEEEEEeccCcCCCcCCCC-cCccccccccccccEEEEEeccccccc--cccceEeeEEEEeecCCCccccc
Q 010687 249 MLQVHRNTYAVVVSTENITQNWYFGNK-KSMLIPNCLFRVGGSAVLLSNKAKDRR--RAKYKLVHVVRTHKGADDNAFKC 325 (504)
Q Consensus 249 lL~a~~~~~aLVVs~E~~S~~~~~~~d-r~~l~~~~lfgDGAaA~LLs~~~~~~~--~~~~~l~~~v~t~~~~d~~~~~~ 325 (504)
++++++.++||||++|..|. ++++.| +.+++++++|||||+|+||++++.... ...+++.+.........+ +.
T Consensus 160 ~~~~~~~~~aLvv~~e~~s~-~~~~~d~~~~~~~~~lfGDgaaA~ll~~~~~~~~~~~~~~~~~~~~~~~~p~~~---~~ 235 (361)
T cd00831 160 LLEANPGARVLVVSTELCSL-WYRGPDHRSMLVGNALFGDGAAAVLLSNDPRDRRRERPLFELVRAASTLLPDSE---DA 235 (361)
T ss_pred HHHHCCCCEEEEEEeecccc-eeCCCCcHHHhhhhhhccCCceEEEEEcCCCcccccccceeeecccceeeecCC---Cc
Confidence 99999999999999999988 666666 766667899999999999998765321 123444332221111111 11
Q ss_pred eeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCC
Q 010687 326 VYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAG 405 (504)
Q Consensus 326 ~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~ 405 (504)
+....+. ....+.++++++....+.++ ...+++++..- .....+|||||++||+
T Consensus 236 ~~~~~~~-~~~~~~~~~~v~~~~~~~~~----------------------~~i~~~L~~~~---~g~~~~did~~~~H~~ 289 (361)
T cd00831 236 MGWHLGE-EGLTFVLSRDVPRLVEKNLE----------------------RVLRKLLARLG---IGLFKLAFDHWCVHPG 289 (361)
T ss_pred eEEEEEc-ceEEEEeChhHHHHHHHHHH----------------------HHHHHHhcccc---CCCccccceEEEECCC
Confidence 1111000 11122333333332221111 11133333210 0222489999999999
Q ss_pred CHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheee
Q 010687 406 GRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVW 477 (504)
Q Consensus 406 g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~ 477 (504)
|+++++.+++.||++++++++|+.++++||||||+|+|+.|++++++|++++||+|++++||+|++|++++|
T Consensus 290 ~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~l~ 361 (361)
T cd00831 290 GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVLAYMEAKGRVKRGDRGLLIAFGPGFTCESAVW 361 (361)
T ss_pred ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHHHHHHHhCCCCCCCEEEEEEEcCCceeeeeeC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999987
No 10
>PLN03169 chalcone synthase family protein; Provisional
Probab=100.00 E-value=1.5e-50 Score=424.54 Aligned_cols=353 Identities=19% Similarity=0.269 Sum_probs=262.4
Q ss_pred HhcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhh-HHHHHHHHHHhCCCceEeccCCC-------cCCCC-
Q 010687 93 IMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESS-LEFQRKILERSGLGEETYVPDAM-------HYLPP- 163 (504)
Q Consensus 93 ~~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~-~~f~~~i~~~sGi~~r~~~~~~~-------~~~~~- 163 (504)
..+.|.+++|.++|+++|+ ++++|+++.+.+.....-+++. .+.+++|++++||++|+++.+.. ...+.
T Consensus 15 ~~~~~~~~~I~gigt~~P~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~ 92 (391)
T PLN03169 15 RAANPGKATILALGKAFPS--QLVPQEYLVDGYFRDTKCDDPALKEKLERLCKTTTVKTRYVVMSKEILDKYPELATEGT 92 (391)
T ss_pred ccCCCCCeEEEEEEeeCCC--eecCHHHHHHHHHHHhcccCHHHHHHHHHHHHhCCcceeeEeccccchhhCccccccCC
Confidence 3457889999999999999 8999999998644311112222 23357899999999999874211 01111
Q ss_pred ---CCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcc-eeEEecCCcchHH
Q 010687 164 ---RPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNI-RSFNLGGMGCSAG 239 (504)
Q Consensus 164 ---~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~-~~~dl~g~gCsg~ 239 (504)
..++..+.+.+.+|+.+|+++||+++|++|+|||+||++|++++..|+++.+|+++||+++++ .++|++ +||+|+
T Consensus 93 ~~~~~r~~~~~e~~~~La~~Aa~~aL~~ag~~~~dId~lI~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~d~~-~gC~g~ 171 (391)
T PLN03169 93 PTIKQRLDIANEAVTQMAVEASLACIKEWGRPVSDITHLVYVSSSEARLPGGDLYLAKQLGLSPDVQRVMLYF-LGCSGG 171 (391)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHCCEEEEECcCCCCCCcHHHHHHHHhCcCCcceeeeccc-ChhHHH
Confidence 223444788899999999999999999999999999999888999999999999999998777 479999 799999
Q ss_pred HHHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCC-C-cCccccccccccccEEEEEecccccc-ccccceEeeEEEEee
Q 010687 240 VIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGN-K-KSMLIPNCLFRVGGSAVLLSNKAKDR-RRAKYKLVHVVRTHK 316 (504)
Q Consensus 240 l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~-d-r~~l~~~~lfgDGAaA~LLs~~~~~~-~~~~~~l~~~v~t~~ 316 (504)
++||++|.+++++++.++||||++|.+|.++.... + ....++.++|||||+|+||++++... ....+++........
T Consensus 172 ~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~~~~~~~~~~d~~~~~lFGDGAaA~vl~~~~~~~~~~~~~~l~~~~~~~i 251 (391)
T PLN03169 172 VAGLRVAKDIAENNPGSRVLLTTSETTILGFRPPSPDRPYDLVGAALFGDGAAAVIIGADPIPVSESPFFELHTAIQQFL 251 (391)
T ss_pred HHHHHHHHHHHHhCCCCeEEEEEEEcChhhccCCCccchhhhhhhhhccCceEEEEEecCCCcccCCcceEEEeeeeeEc
Confidence 99999999999999999999999999887553211 1 22334678999999999999865321 112233322111111
Q ss_pred cCCCccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCccc
Q 010687 317 GADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKL 395 (504)
Q Consensus 317 ~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~ 395 (504)
...+.. +-.....+| ..+.+++++++.+.+.++. ..+++++ ..+. .+
T Consensus 252 p~~~~~---~~~~~~~~g-~~~~~g~~v~~~~~~~~~~----------------------~i~~~L~~~gl~------~~ 299 (391)
T PLN03169 252 PGTEKT---IDGRLTEEG-INFKLGRELPQKIEDNIEG----------------------FCKKLMKKAGLV------EK 299 (391)
T ss_pred CCCccc---cCceecCCc-eEEEECcHHHHHHHHHHHH----------------------HHHHHHHHcCCC------CC
Confidence 111111 111111112 2345566776655432221 1134443 2232 25
Q ss_pred ccC--EEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCC---CCCEEEEEeechhH
Q 010687 396 AFD--HFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMR---RGNRVWQIAFGSGF 470 (504)
Q Consensus 396 did--~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~---~Gd~Vlli~fG~G~ 470 (504)
|+| +|++||+|+++++.+++.||++++++.+|++++++||||||+|+|+.|++++++++++ +||++++++||+|+
T Consensus 300 did~~~~v~Hq~n~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~~~~~~~~~~~~gd~~ll~afG~G~ 379 (391)
T PLN03169 300 DYNDLFWAVHPGGPAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYMREELKKKGEEDEEWGLILAFGPGI 379 (391)
T ss_pred CCCcceEEecCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHHHHhhcccCCCCCcEEEEEEEcccH
Confidence 677 9999999999999999999999999998899999999999999999999999888876 69999999999999
Q ss_pred HhhheeeEee
Q 010687 471 KCNSAVWQAL 480 (504)
Q Consensus 471 ~~~sav~r~~ 480 (504)
+|+++++||.
T Consensus 380 s~~~~ll~~~ 389 (391)
T PLN03169 380 TFEGILARNL 389 (391)
T ss_pred hHHHHHHhhh
Confidence 9999999985
No 11
>PLN03168 chalcone synthase; Provisional
Probab=100.00 E-value=1.9e-50 Score=423.15 Aligned_cols=348 Identities=18% Similarity=0.257 Sum_probs=262.1
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceEecc-CCC---cC------CCC-C
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGD--FDESSLEFQRKILERSGLGEETYVP-DAM---HY------LPP-R 164 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~-~~~---~~------~~~-~ 164 (504)
.+++|.++|+..|+ +.++++++.+.+..... -.++..+.+++|++++||++|+..- ++. +. .|+ .
T Consensus 14 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~ps~~ 91 (389)
T PLN03168 14 GPACVLGIGTAVPP--AEFLQSEYPDFFFNITNCGEKEALKAKFKRICDKSGIRKRHMFLTEEVLKANPGICTYMEPSLN 91 (389)
T ss_pred CCeEEEEEeccCCC--cccCHHHHHHHHHHhccccCcHHHHHHHHHHHHhcCCCeeeeeccccchhhCcccccccCCCHH
Confidence 56899999999999 89999999998765321 0122333367899999999998743 211 10 011 3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcc-eeEEecCCcchHHHHHH
Q 010687 165 PSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNI-RSFNLGGMGCSAGVIAI 243 (504)
Q Consensus 165 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~-~~~dl~g~gCsg~l~aL 243 (504)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++.+..|+++++|+++||+++++ +++|++ +||+||++||
T Consensus 92 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~g~~~aL 170 (389)
T PLN03168 92 VRHDIVVVQVPKLAAEAAQKAIKEWGGRKSDITHIVFATTSGVNMPGADHALAKLLGLKPTVKRVMMYQ-TGCFGGASVL 170 (389)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCccHHHHHHHHhCcCCcceeeeeeC-CccHHHHHHH
Confidence 45778899999999999999999999999999999999765566999999999999999766 478888 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCCcCCCC--cCccccccccccccEEEEEecccccc-ccccceEeeEEEEeec-CC
Q 010687 244 DLAKDMLQVHRNTYAVVVSTENITQNWYFGNK--KSMLIPNCLFRVGGSAVLLSNKAKDR-RRAKYKLVHVVRTHKG-AD 319 (504)
Q Consensus 244 ~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~d--r~~l~~~~lfgDGAaA~LLs~~~~~~-~~~~~~l~~~v~t~~~-~d 319 (504)
++|++++++++.++||||++|.+|.+|....+ .+.++++++|||||+|+||++++... .++.+++.....+... ++
T Consensus 171 ~~A~~~i~~~~~~~VLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvvl~~~~~~~~~~~~~~~~~~~~~~~p~s~ 250 (389)
T PLN03168 171 RVAKDLAENNKGARVLAVASEVTAVTYRAPSENHLDGLVGSALFGDGAGVYVVGSDPKPEVEKALFEVHWAGETILPESD 250 (389)
T ss_pred HHHHHHHHhCCCCEEEEEEEehhhhhccCcccccHHHHhccccccCccEEEEEecCCCCccCCcceEEEeeeeEEEcCCC
Confidence 99999999999999999999999986643222 34456889999999999999865321 1123443322222222 22
Q ss_pred CccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccC
Q 010687 320 DNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFD 398 (504)
Q Consensus 320 ~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did 398 (504)
+. +.+.-++.| ..+.+++++|+...+.++..+ ++.++ .... ..|++
T Consensus 251 ~~----~~~~~~~~g-~~~~l~~~vp~~i~~~~~~~l----------------------~~~l~~~~~~------~~d~~ 297 (389)
T PLN03168 251 GA----IDGHLTEAG-LIFHLMKDVPGLISKNIEKFL----------------------NEARKCVGSP------DWNEM 297 (389)
T ss_pred Cc----cCceEecCc-eEEEECHHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccc
Confidence 21 111111112 345567777776544322111 12222 1111 25778
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCC--------CEEEEEeechhH
Q 010687 399 HFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRG--------NRVWQIAFGSGF 470 (504)
Q Consensus 399 ~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~G--------d~Vlli~fG~G~ 470 (504)
+|++||+|+++++.+++.|||+++++..|+.++++||||||+|+++.|+++.++ ++++| |+++++|||+|+
T Consensus 298 ~~v~Hqgg~~Il~~v~~~Lgl~~ek~~~s~~vl~~yGNtSSaSv~~vL~~~~~~-~~~~g~~~~~~g~~~~ll~afGpG~ 376 (389)
T PLN03168 298 FWAVHPGGPAILDQVEAKLKLTKDKMQGSRDILSEFGNMSSASVLFVLDQIRQR-SVKMGASTLGEGSEFGFFIGFGPGL 376 (389)
T ss_pred eEEecCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHhhhHHHHHHHHHHH-HhhcCCCCCCCCccEEEEEEEcchh
Confidence 999999999999999999999999999999999999999999999999999865 66654 899999999999
Q ss_pred HhhheeeEeecc
Q 010687 471 KCNSAVWQALRN 482 (504)
Q Consensus 471 ~~~sav~r~~~~ 482 (504)
+|+++++||..+
T Consensus 377 t~~~~llr~~~~ 388 (389)
T PLN03168 377 TLEVLVLRAAAN 388 (389)
T ss_pred hhhhhhheeccc
Confidence 999999999654
No 12
>PLN03173 chalcone synthase; Provisional
Probab=100.00 E-value=2.6e-50 Score=421.98 Aligned_cols=348 Identities=19% Similarity=0.250 Sum_probs=267.8
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceEeccCCC----c---CC---CC-C
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGD--FDESSLEFQRKILERSGLGEETYVPDAM----H---YL---PP-R 164 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~~~----~---~~---~~-~ 164 (504)
.+++|.++|+..|+ +.++++++.+.+..... -.+...+.+++|++++||++|+..-+.+ + .. |+ .
T Consensus 15 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 92 (391)
T PLN03173 15 GPATIMAIGTSTPP--NCVDQSTYPDYYFRITNSEHKVELKEKFKRMCEKSMIKKRYMHLTEEILKENPSVCEYMAPSLD 92 (391)
T ss_pred CCeEEEEEEccCCC--cccCHHHHHHHHHHHhccccchhHHHHHHHHHHhCCCCeeeEeccchhhhhCcccccccCCCHH
Confidence 56899999999999 89999999998865321 1222233368899999999998753211 1 10 11 3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE-EecCCcchHHHHHH
Q 010687 165 PSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF-NLGGMGCSAGVIAI 243 (504)
Q Consensus 165 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~-dl~g~gCsg~l~aL 243 (504)
..++.+.+++.+|+.+|+++||+++|++|+|||+||++|++....|+++.+|+++||+++++..+ +++ +||+|++.||
T Consensus 93 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~li~~t~t~~~~P~~a~~l~~~LGl~~~~~~~~~~~-~gC~g~~~aL 171 (391)
T PLN03173 93 ARQDMVVVEVPKLGKEAAAKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKLLGLRSSVKRFMMYQ-QGCFAGGTVL 171 (391)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCcccHHHHHHHHHhCCCccceeeehhc-CccHHHHHHH
Confidence 45678899999999999999999999999999999988765555899999999999999777554 556 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCc--CccccccccccccEEEEEecccccc-ccccceEeeEEEEee-cCC
Q 010687 244 DLAKDMLQVHRNTYAVVVSTENITQNWYFGNKK--SMLIPNCLFRVGGSAVLLSNKAKDR-RRAKYKLVHVVRTHK-GAD 319 (504)
Q Consensus 244 ~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr--~~l~~~~lfgDGAaA~LLs~~~~~~-~~~~~~l~~~v~t~~-~~d 319 (504)
++|++++++++.++||||++|.+|.+|++++|+ +.++++++|||||+|+||++++... .++.|++.+..++.. .++
T Consensus 172 ~~A~~~~~~~~~~~vLVV~~E~~S~~~~~~~d~~~~~~v~~~LFGDGAaAvvl~~~~~~~~~~~~~~l~~~~~~~~~~t~ 251 (391)
T PLN03173 172 RLAKDLAENNKGARVLVVCSEITAVTFRGPSDTHLDSLVGQALFGDGAAAIIIGSDPVLGVEKPLFELVSAAQTILPDSD 251 (391)
T ss_pred HHHHHHHHhCCCCeEEEEEEehhhhhhCCccccchhhhhhhhhhcCceEEEEEeCCCCCCcCCcceEEEeeeeEEecCCc
Confidence 999999999999999999999999766655553 3556889999999999999854321 123566655443332 344
Q ss_pred CccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccC
Q 010687 320 DNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFD 398 (504)
Q Consensus 320 ~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did 398 (504)
+.....+ . ..| .++.+++++|+.+.+.++..+ +++++ ..+. ..|+|
T Consensus 252 ~~~~~~i-~---~~G-~~~~l~~~vp~~~~~~~~~~i----------------------~~~L~~~gl~------~~di~ 298 (391)
T PLN03173 252 GAIDGHL-R---EVG-LTFHLLKDVPGLISKNVEKSL----------------------TEAFKPLGIS------DWNSL 298 (391)
T ss_pred cceeeEE-E---cCc-eEEEEecHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccC
Confidence 4322111 1 122 356778888887654433222 33443 2222 38999
Q ss_pred EEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHc----CCCCCC---CEEEEEeechhHH
Q 010687 399 HFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAK----GRMRRG---NRVWQIAFGSGFK 471 (504)
Q Consensus 399 ~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~----g~i~~G---d~Vlli~fG~G~~ 471 (504)
+|++||+|+++++.+++.|||+++|+.+|++++++||||||+|+|+.|++++++ |.+++| ++++++|||+||+
T Consensus 299 ~~v~Hqgg~~Il~~v~~~LgL~~ekl~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~~~~~~g~~~~~~l~~afGpG~t 378 (391)
T PLN03173 299 FWIAHPGGPAILDQVEAKLALKPEKLRATRHVLSEYGNMSSACVLFILDEMRKKSAEDGLKSTGEGLEWGVLFGFGPGLT 378 (391)
T ss_pred eEEECCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCcchhhHHHHHHHHHHHhhhhcCCCCCCCCcceEEEEEeCchHH
Confidence 999999999999999999999999999999999999999999999999999863 444433 8899999999999
Q ss_pred hhheeeEeec
Q 010687 472 CNSAVWQALR 481 (504)
Q Consensus 472 ~~sav~r~~~ 481 (504)
++++++||..
T Consensus 379 ~e~~ll~~~~ 388 (391)
T PLN03173 379 VETVVLHSVA 388 (391)
T ss_pred HHHHHHhhcc
Confidence 9999999854
No 13
>PLN03171 chalcone synthase-like protein; Provisional
Probab=100.00 E-value=3.6e-49 Score=415.06 Aligned_cols=353 Identities=18% Similarity=0.223 Sum_probs=260.5
Q ss_pred CCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChh---hHHHHHHHHHHhCCCceEeccCCC----c------CC-C
Q 010687 97 PRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDES---SLEFQRKILERSGLGEETYVPDAM----H------YL-P 162 (504)
Q Consensus 97 ~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~---~~~f~~~i~~~sGi~~r~~~~~~~----~------~~-~ 162 (504)
+.+++|+++|+|+|+ ++++|+++.+++..... +++ ..+.+++|++++||++||++.+++ . .. .
T Consensus 20 ~~~~~I~gigt~~P~--~~v~n~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~tGI~~R~~~~~~~~~~~~~~~~~~~~~~ 96 (399)
T PLN03171 20 DGLAAVLAIGTANPA--NCVPQDEFPDFYFRATK-SDHLTALKDKFKRICQELGVQKRYLHHTEELLSAHPEFLDHDAPS 96 (399)
T ss_pred CCCcEEEEEEeeCCC--cccCHHHHHHHHHHHhc-ccccHHHHHHHHHHHHhcCCCceeEeccccccccCccccccCCCC
Confidence 467999999999999 89999999987532110 111 122357899999999999986542 0 01 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcce-eEEecCCcchHHHH
Q 010687 163 PRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIR-SFNLGGMGCSAGVI 241 (504)
Q Consensus 163 ~~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~-~~dl~g~gCsg~l~ 241 (504)
....++.+.+.+.+|+.+|++++|+++|++|+|||+||++|++....|+++.+|+++||+++++. ++++. +||+|+++
T Consensus 97 ~~~r~~~~~~~a~~la~~Aa~~aL~~ag~~~~dId~li~~t~t~~~~P~~a~~v~~~LGl~~~~~~~~~~~-~gC~g~~~ 175 (399)
T PLN03171 97 LDARLDIAADAVPELAAEAAKKAIAEWGRPAADITHLVVTTNSGAHIPGVDFRLVPLLGLRPSVRRTMLHL-NGCFAGAA 175 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHhCCCcccceeeccC-CccHHHHH
Confidence 23456778899999999999999999999999999999997644458999999999999986654 56666 69999999
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCcC---ccccccccccccEEEEEeccccccccccceEeeEEEEeecC
Q 010687 242 AIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKS---MLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGA 318 (504)
Q Consensus 242 aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr~---~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~ 318 (504)
||++|.+|+++++.++||||++|.+|.. +++.|++ .++++++|||||+|+||+++++...+..+++.......
T Consensus 176 aL~~A~~li~~~~~~~vLVv~~e~~s~~-~~~~d~~~~~~~v~~~LFGDGAaA~vl~~~~~~~~~~~~~l~~~~~~~--- 251 (399)
T PLN03171 176 ALRLAKDLAENNRGARVLVVAAEITLLL-FNGPDEGCFQTLLNQGLFGDGAAAVIVGADADAAERPLFEIVSAAQAI--- 251 (399)
T ss_pred HHHHHHHHHHhCCCCeEEEEEEeccccc-cCCCCcccHHhhhccccccCccEEEEEecCCCCCCCCceEEEEeeeEE---
Confidence 9999999999999999999999999984 4444443 34567899999999999986643222345555433222
Q ss_pred CCccccceeecccCCCCcccccc-hhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCccccc
Q 010687 319 DDNAFKCVYQEQDNAGKTGVSLS-KDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAF 397 (504)
Q Consensus 319 d~~~~~~~~~~~d~~g~~g~~ls-~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~di 397 (504)
++...+.+.+..+. +.....++ +++|....+.++..+. +.+...+..-...-.+|+
T Consensus 252 ~p~~~~~~~~~~~~-~g~~~~~~~~~vp~~i~~~l~~~l~----------------------~~l~~~~~~~~g~~~~di 308 (399)
T PLN03171 252 IPESDDAINMHFTE-GGLDGNIGTRQVPGLIGDNIERCLL----------------------DAFAPLLGGDGGAEWNDL 308 (399)
T ss_pred ecCCchheEEEEEc-CCceEEECchhHHHHHHHHHHHHHH----------------------HHHHhhcccccCCCcccc
Confidence 33333334332111 22222344 6666655443332211 111100000000013677
Q ss_pred CEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCC--CCCC---CEEEEEeechhHHh
Q 010687 398 DHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGR--MRRG---NRVWQIAFGSGFKC 472 (504)
Q Consensus 398 d~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~--i~~G---d~Vlli~fG~G~~~ 472 (504)
+++ +||+|+++++.+++.||++++|+..|+.++++||||||+|+|+.|+++.++++ +++| |+++++|||+|++|
T Consensus 309 ~~~-~Hq~~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtssaSip~~L~~~~~~~~~~~~~G~~~d~vll~~fG~Glt~ 387 (399)
T PLN03171 309 FWA-VHPGSSAILDQVDAALGLEPEKLAASRRVLSDYGNMFGATVIFALDELRRQMEEAAAAGAWPELGVMMAFGPGLTV 387 (399)
T ss_pred eEE-EcCCcHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchhhhHHHHHHHHHhhHhhcCCCCCCcceEEEEEEcccHHH
Confidence 765 79999999999999999999999988999999999999999999999988764 6888 99999999999999
Q ss_pred hheeeEeec
Q 010687 473 NSAVWQALR 481 (504)
Q Consensus 473 ~sav~r~~~ 481 (504)
++++|++.+
T Consensus 388 ~~~ll~~~~ 396 (399)
T PLN03171 388 DAMLLHASG 396 (399)
T ss_pred HHHHhhccc
Confidence 999999865
No 14
>PLN03170 chalcone synthase; Provisional
Probab=100.00 E-value=3.1e-49 Score=415.38 Aligned_cols=350 Identities=18% Similarity=0.239 Sum_probs=266.4
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCCC-C-hhhHHHHHHHHHHhCCCceEeccCCC----cC------CCC-C
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDF-D-ESSLEFQRKILERSGLGEETYVPDAM----HY------LPP-R 164 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~-~-~~~~~f~~~i~~~sGi~~r~~~~~~~----~~------~~~-~ 164 (504)
.+++|.++|+..|+ +.++++++.+.+.....- + ++..+.+++|++++||++|+..-+++ +. .|+ .
T Consensus 19 ~~~~i~~i~ta~P~--~~~~q~~~~~~~~~~~~~~~~~~~~~~~~~i~~~sgI~~R~~~~~~~~~~~~~~~~~~~~p~~~ 96 (401)
T PLN03170 19 GPATVLAIGTATPA--NCVHQADYPDYYFRITKSEHMTELKEKFKRMCDKSQIRKRYMHLTEEYLAENPNMCAYMAPSLD 96 (401)
T ss_pred CCeEEEEEeecCCC--ccccHHHHHHHHHHHccccCchhHHHHHHHHHHhCCCCceeEeccccchhhCccccccCCCCHH
Confidence 45899999999999 899999999987753210 1 22223368899999999998754211 10 011 3
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcc-eeEEecCCcchHHHHHH
Q 010687 165 PSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNI-RSFNLGGMGCSAGVIAI 243 (504)
Q Consensus 165 ~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~-~~~dl~g~gCsg~l~aL 243 (504)
..++.+.+++.+|+.+|+++||+++|++++|||+||++|++....|+++.+|+++||+++++ +++|++ +||+|++.||
T Consensus 97 ~r~~~~~~~a~~La~~Aa~~AL~~ag~~~~dId~lI~~T~Tg~~~Ps~a~~l~~~LGl~~~~~r~~d~~-~gC~G~~~aL 175 (401)
T PLN03170 97 ARQDIVVVEVPKLGKAAAQKAIKEWGQPKSKITHLVFCTTSGVDMPGADYQLTKMLGLRPSVNRLMMYQ-QGCFAGGTVL 175 (401)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEEccCCCCCChHHHHHHHHhCcCcccHHHHhhc-ChhHHHHHHH
Confidence 45678899999999999999999999999999999988765556999999999999999766 478999 8999999999
Q ss_pred HHHHHHHhcCCCCeEEEEEeccCcCCCcCCCC--cCccccccccccccEEEEEecccccc-ccccceEeeEEEEeecCCC
Q 010687 244 DLAKDMLQVHRNTYAVVVSTENITQNWYFGNK--KSMLIPNCLFRVGGSAVLLSNKAKDR-RRAKYKLVHVVRTHKGADD 320 (504)
Q Consensus 244 ~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~d--r~~l~~~~lfgDGAaA~LLs~~~~~~-~~~~~~l~~~v~t~~~~d~ 320 (504)
++|++++++++.++||||++|.+|.++..+++ .+.++++++|||||+|+||++++... .++.|++........ .+.
T Consensus 176 ~~A~~l~~~~~~~~vLVV~~E~~S~~~~~~~~~~~~~~~~~~LFGDGAaAvVl~~~~~~~~~~~~~~l~~~~~~~~-p~~ 254 (401)
T PLN03170 176 RVAKDLAENNRGARVLVVCSEITAVTFRGPSESHLDSMVGQALFGDGAAAVIVGADPDERVERPLFQLVSASQTIL-PDS 254 (401)
T ss_pred HHHHHHHHcCCCCeEEEEEEehhhhccCCcccchhhhhhhhhhhhceeEEEEEecCCcccccCCceEEeeccceEe-cCC
Confidence 99999999999999999999999986644432 23456788999999999999865421 112345443221111 111
Q ss_pred ccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCE
Q 010687 321 NAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDH 399 (504)
Q Consensus 321 ~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~ 399 (504)
..+ +.+.-.+.| ..+.+++++|..+.+.++..+ +++++ ..+. ..|+++
T Consensus 255 ~~~--~~~~i~~~G-~~~~l~~~vp~~~~~~i~~~v----------------------~~~L~~~gl~------~~di~~ 303 (401)
T PLN03170 255 EGA--IDGHLREVG-LTFHLLKDVPGLISKNIERSL----------------------EEAFKPLGIT------DYNSIF 303 (401)
T ss_pred ccc--ccceEEcCC-eEEEEehHHHHHHHHHHHHHH----------------------HHHHHhcCCC------ccccCe
Confidence 111 111111122 245667888877654332211 33443 2222 378999
Q ss_pred EEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHH----HcCCCCCC---CEEEEEeechhHHh
Q 010687 400 FCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTE----AKGRMRRG---NRVWQIAFGSGFKC 472 (504)
Q Consensus 400 ~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~----~~g~i~~G---d~Vlli~fG~G~~~ 472 (504)
|++||+|+++++.+++.||++++++.+|+.++++||||||+|+++.|+++. ++|++++| |++++++||+||++
T Consensus 304 ~v~Hqgg~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~~G~~~~~~ll~afGpG~t~ 383 (401)
T PLN03170 304 WVAHPGGPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQATTGEGFDWGVLFGFGPGLTV 383 (401)
T ss_pred EEecCCcHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCCCCCCccEEEEEEeCchHhH
Confidence 999999999999999999999999999999999999999999999999997 46888888 89999999999999
Q ss_pred hheeeEeecc
Q 010687 473 NSAVWQALRN 482 (504)
Q Consensus 473 ~sav~r~~~~ 482 (504)
+++++||.+.
T Consensus 384 ~~~ll~~~~~ 393 (401)
T PLN03170 384 ETVVLHSVPI 393 (401)
T ss_pred HhHHheeccc
Confidence 9999999653
No 15
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=100.00 E-value=2.1e-48 Score=399.27 Aligned_cols=318 Identities=17% Similarity=0.262 Sum_probs=246.9
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
+++|+++|+|+|+ ++++|+++.+..+. +++ ++.+++||++|+++++++. +.+|+
T Consensus 3 ~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~e~--------------~~~la 56 (326)
T PRK05963 3 SSRIAGFGHAVPD--RRVENAEIEAQLGL----ETG------WIERRTGIRCRRWAAPDET--------------LSDLA 56 (326)
T ss_pred ccEEEEEEEECCC--CeecHHHHHHHcCC----CHH------HhhhccCCeEEEEcCCCCC--------------HHHHH
Confidence 6899999999999 89999999887642 333 6889999999999877653 78999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+||++||+++|++|+|||+||++| ++++..|+.+.+|+++||++ ++.+||+++ ||+|++.||++|.++++++ .++
T Consensus 57 ~~Aa~~aL~~ag~~~~~Id~li~~t~~~d~~~p~~a~~v~~~Lg~~-~~~~~di~~-~C~g~~~aL~~A~~~l~~~-~~~ 133 (326)
T PRK05963 57 ASAGDMALSDAGIERSDIALTLLATSTPDHLLPPSAPLLAHRLGLQ-NSGAIDLAG-ACAGFLYALVLADGFVRAQ-GKP 133 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCcHHHHHHHHhCCC-CCceeeccc-hhhHHHHHHHHHHHHHHcC-CCe
Confidence 9999999999999999999999986 47889999999999999998 689999995 9999999999999999987 489
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCcc
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTG 337 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 337 (504)
||||++|..+. +.++.++. +..+|||||+|+||++++... .. ++.+...++++.|+.+..+.++..
T Consensus 134 aLVv~~d~~s~-~~~~~~~~---~~~lfGDgA~A~ll~~~~~~~----~~---~l~~~~~t~~~~~~~~~~~~gg~~--- 199 (326)
T PRK05963 134 VLVVAANILSR-RINMAERA---SAVLFADAAGAVVLAPSAKAN----SG---VLGSQLISDGSHYDLIKIPAGGSA--- 199 (326)
T ss_pred EEEEEechhhc-cCCccccC---ceEEEeecceEEEEEecCCCC----Cc---eEEEEEEEcCCCCCeEEeCCCCcC---
Confidence 99999999887 44445554 568999999999999866421 22 333445567776776555433211
Q ss_pred cccchhHHHHHHHHHhhhhh-hcCCCccchhhHHHHHHHH---HHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHH
Q 010687 338 VSLSKDLMAIAGMALKANIT-TLGPLVLPISEQLLFFATL---VAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDE 412 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~-~~gp~vlp~se~~~~~~~~---~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~ 412 (504)
.+.+.+... + +..+. ..|+.+ +.++... ..+++++ ..++ .+|||+|++||+|+++++.
T Consensus 200 ~~~~~~~~~---~--~~~~~~~~~~~~------~~~~~~~~~~~~~~~L~~~gl~------~~did~~~~h~~~~~~~~~ 262 (326)
T PRK05963 200 RPFAPERDA---S--EFLMTMQDGRAV------FTEAVRMMSGASQNVLASAAMT------PQDIDRFFPHQANARIVDK 262 (326)
T ss_pred CCCcccccc---c--ccceEecCCHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEeCCCCHHHHHH
Confidence 011100000 0 00000 011111 1111111 1123333 2233 4899999999999999999
Q ss_pred HHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 413 LEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 413 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
+.+.||++++++ ..++++||||+|+|++++|+++++++++++||+|++++||+|++++++++||
T Consensus 263 ~~~~l~l~~~k~---~~~l~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~~~~~~ll~~ 326 (326)
T PRK05963 263 VCETIGIPRAKA---ASTLETYGNSSAATIPLSLSLANLEQPLREGERLLFAAAGAGMTGGAVVMRV 326 (326)
T ss_pred HHHHcCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEehhhhheeeEEeC
Confidence 999999999999 5899999999999999999999999999999999999999999999999986
No 16
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.6e-48 Score=376.08 Aligned_cols=346 Identities=26% Similarity=0.352 Sum_probs=280.6
Q ss_pred eEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHH-HhCCCceEeccCCCcCCCC---CCcHHHHHHHHH
Q 010687 100 IYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILE-RSGLGEETYVPDAMHYLPP---RPSMAAAREEAE 175 (504)
Q Consensus 100 v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~-~sGi~~r~~~~~~~~~~~~---~~~~~~~~~ea~ 175 (504)
.+|.++++++|+ +++++.|+...+.... +.+. .+-+.+.+. ..+|.+|+.+.|.+++..+ ...++-+.||+.
T Consensus 2 a~i~sv~t~~Pp--y~~~Qse~~d~f~~~~-~~~~-~~~I~r~l~~~~~i~~R~~v~Pl~~y~e~~~f~ekN~ifie~a~ 77 (356)
T COG3424 2 AVIASVATALPP--YRYNQSEITDSFAELP-FQEG-REDIPRVLHANAQINRRHLVLPLDWYREPHGFGEKNEIFIEEAV 77 (356)
T ss_pred ceeeecccCCCc--cccchHHHHHHHHHhc-cccc-hHHHHHHHhhccccccceecccHhhccCCCChhhhhhhHHHHHH
Confidence 479999999999 8899988777665432 2222 333345555 5677777777666655332 235677899999
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCC
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRN 255 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~ 255 (504)
+++++|.++||+++++.|+|||+|+++|+++..+||+.++|+++||+++++..+.+.||||+|+..|+..|+++++++|.
T Consensus 78 ~l~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~ 157 (356)
T COG3424 78 PLGVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPD 157 (356)
T ss_pred HHHHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCcc
Confidence 99999999999999999999999999999888999999999999999999999999999999999999999999999999
Q ss_pred CeEEEEEeccCcCCCcCCCC-cCccccccccccccEEEEEeccccc--cccccceEeeEEEEeecCCCccccceeecccC
Q 010687 256 TYAVVVSTENITQNWYFGNK-KSMLIPNCLFRVGGSAVLLSNKAKD--RRRAKYKLVHVVRTHKGADDNAFKCVYQEQDN 332 (504)
Q Consensus 256 ~~aLVVs~E~~S~~~~~~~d-r~~l~~~~lfgDGAaA~LLs~~~~~--~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~ 332 (504)
.+|||||.|.||.++...++ ++.++...+||||+||+|++.+... ....++.+.+..++ ...|+ -+-|-+.-++
T Consensus 158 ~~vlvV~vELCSLt~~~~d~t~s~lVgtaLF~DG~AA~vv~gd~~~~~~~~~~p~i~~s~St-L~~ds--e~~Mgwdv~d 234 (356)
T COG3424 158 ANVLVVCVELCSLTYVFADDTKSNLVGTALFGDGAAAVVVSGDRRAEGKRPLRPDILDSFST-LYPDS--EDIMGWDVGD 234 (356)
T ss_pred ceEEEEEeeeeeeeeecCCCCcccceeeeeecCCeeEEEEeccccccccCCCCceecccccc-cCCcc--ccccceeecC
Confidence 99999999999998766555 3588999999999999999986542 22223444433322 22222 2344555444
Q ss_pred CCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCCCHHHHHH
Q 010687 333 AGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAVIDE 412 (504)
Q Consensus 333 ~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~g~~vl~~ 412 (504)
+| ..+.+|+|+|..+...++.|+++ | +-...+. .+||++|+.|+||++++++
T Consensus 235 ~G-~~~vlSrdlp~lIe~~l~~~V~~-------------f--------L~~~~ls------~~dI~~w~~HPGG~KVida 286 (356)
T COG3424 235 QG-LKVVLSRDLPNLIESYLAPNVTT-------------F--------LATHGLS------IEDIEAWVVHPGGPKVIDA 286 (356)
T ss_pred Cc-EEEEEcCchhHHHHHHhhhhHHH-------------H--------HHHcCCc------hhhhceeeeCCCCchHHHH
Confidence 44 46789999999988877777654 1 1111222 4899999999999999999
Q ss_pred HHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeec
Q 010687 413 LEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALR 481 (504)
Q Consensus 413 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~ 481 (504)
+++.|||++++++.||..|++|||+||+++++.|.+.++++ .++|++.++++||+||+.+.++++|.+
T Consensus 287 ~~~sLgls~e~l~~s~~~L~~~GNMSSatvLfVL~d~l~~~-~~~g~~Gl~~A~GPGf~sElvL~~w~~ 354 (356)
T COG3424 287 YEESLGLSPEALELSWDVLREYGNMSSATVLFVLEDTLQKA-PKSGSRGLMFAMGPGFCSELVLLDWEG 354 (356)
T ss_pred HHHhcCCCHHHHHHHHHHHHHhCCccchhhHHHHHHHHHhc-CCCCcceeeeecCCcceeeeeeEEeec
Confidence 99999999999999999999999999999999999999986 789999999999999999999999975
No 17
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1e-47 Score=398.34 Aligned_cols=333 Identities=16% Similarity=0.199 Sum_probs=248.2
Q ss_pred CCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHH
Q 010687 96 RPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAE 175 (504)
Q Consensus 96 ~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 175 (504)
|-++++|++++.|+|+ ++++|+++.+.... ++. ...+++.+++||++|+++.+++. +.
T Consensus 4 ~~~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~--~~~~~i~~~~Gi~~R~~~~~~e~--------------~~ 61 (353)
T PRK12880 4 RFDKAKISGICVSVPE--HKICIDDELESVFS----NDI--KTLKRMKKVIGLNTRYICDENTC--------------VS 61 (353)
T ss_pred cccccEEEEEEEECCC--eEecHHHHHHHhcC----cch--hhhhhhhhccCceEEEeCCCCCC--------------HH
Confidence 4567999999999999 89999976543321 121 12357889999999999876543 79
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCC
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHR 254 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~ 254 (504)
+|+.+|+++||+++|++|+|||+||++| ++++..|+++.+|+++||+++++.+||++ +||+|++.||++|++++++++
T Consensus 62 ~la~~Aa~~aL~~a~~~~~dId~lI~~t~t~d~~~P~~a~~v~~~Lg~~~~~~~~di~-~~C~g~~~aL~~A~~~i~~~~ 140 (353)
T PRK12880 62 DLGKHAANTLLQGLNIDKNSLDALIVVTQSPDFFMPSTACYLHQLLNLSSKTIAFDLG-QACAGYLYGLFVAHSLIQSGL 140 (353)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCCCCceEEehh-hhhHHHHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999986 56999999999999999998889999998 699999999999999999998
Q ss_pred CCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCC
Q 010687 255 NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAG 334 (504)
Q Consensus 255 ~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g 334 (504)
.+ ||||++|.+|+ +.++.|+. +..+|||||+|+||++++... . . ....+++..++.+..+.++..
T Consensus 141 ~~-~LVv~~e~~S~-~~~~~d~~---~~~lFGDGAaA~vl~~~~~~~---~-----~--~~~~~~~~~~~~~~~p~g~~~ 205 (353)
T PRK12880 141 GK-ILLICGDTLSK-FIHPKNMN---LAPIFGDGVSATLIEKTDFNE---A-----F--FELGSDGKYFDKLIIPKGAMR 205 (353)
T ss_pred CC-EEEEEehhhhc-cCCcccCC---ceeeecccceEEEEEecCCCC---c-----e--EEEEecCCCCCeEEecCCCcC
Confidence 88 99999999998 44556654 468999999999999755321 1 1 134567777777776644321
Q ss_pred Ccccccchh--HHHHHHHHHhhhhhhcCCCccchhhHHHHHHHH---HHHHHHHh-hccCCccCcccccCEEEEcCCCHH
Q 010687 335 KTGVSLSKD--LMAIAGMALKANITTLGPLVLPISEQLLFFATL---VAKKFSNA-KVKPYIPDFKLAFDHFCIHAGGRA 408 (504)
Q Consensus 335 ~~g~~ls~d--l~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~---~~~~vl~~-~~~~~~p~~~~did~~~~Hq~g~~ 408 (504)
..+.....+ .+......-...+...|+.+ +.+.... ..+++++. .+. .+|||+|++||+|++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~~~~~i~~~L~~~gl~------~~did~~v~HQ~~~~ 273 (353)
T PRK12880 206 IPKADIFNDDSLMQTEEFRQLENLYMDGANI------FNMALECEPKSFKEILEFSKVD------EKDIAFHLFHQSNAY 273 (353)
T ss_pred CCccccccccccccccccccCceEEEcCHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHH
Confidence 111110000 00000000000111222222 1222221 12344432 222 489999999999999
Q ss_pred HHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeeccCC
Q 010687 409 VIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVK 484 (504)
Q Consensus 409 vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~ 484 (504)
+++.+++.||++++|+. ..++++||||||||+|+.|+++.++|+++ +++++||+|++|+++++||.+-+.
T Consensus 274 i~~~i~~~Lgl~~ek~~--~~~l~~~GNtssasip~~L~~~~~~~~~~----~ll~~~G~G~s~g~~ll~~~~~~~ 343 (353)
T PRK12880 274 LVDCIKEELKLNDDKVP--NFIMEKYANLSACSLPALLCELDTPKEFK----ASLSAFGAGLSWGSAVLNFKDLYT 343 (353)
T ss_pred HHHHHHHHhCCCHHHhh--hhhHHhhCCHHHHHHHHHHHHHHHcCCcE----EEEEEEchhhhheEeEEEECCcCC
Confidence 99999999999999982 35689999999999999999999887764 999999999999999999965443
No 18
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=100.00 E-value=4.9e-47 Score=397.21 Aligned_cols=328 Identities=18% Similarity=0.244 Sum_probs=244.2
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQV 177 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 177 (504)
.+++|+++|+|+|+ ++++|+++.+.++. +++ +|.+++||++|+++.+++. +.+|
T Consensus 46 ~~~~I~g~g~~lP~--~~v~n~el~~~~~~----~~~------~i~~~tGi~~R~~~~~~~~--------------~~~L 99 (379)
T PLN02326 46 SGSKLVGCGSAVPK--LLITNDDLSKLVDT----SDE------WIATRTGIRNRRVLSGDET--------------LTSL 99 (379)
T ss_pred CCcEEEEEEEECCC--ceecHHHHHHhcCC----chh------heecccCcceEeecCCCCC--------------HHHH
Confidence 46899999999999 89999999887652 332 6899999999999876543 7899
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
+.+|++++|+++|++++|||.||++|+.....++.+..|+++||++ ++.+||++ +||+|++.||++|.+++++++.++
T Consensus 100 a~~Aa~~aL~~agi~~~dId~li~~s~~~~~~~~~a~~v~~~LG~~-~~~~~dv~-~~Ca~~~~aL~~A~~~l~~g~~~~ 177 (379)
T PLN02326 100 AVEAAKKALEMAGVDPEDVDLVLLCTSSPDDLFGSAPQVQAALGCT-NALAFDLT-AACSGFVLGLVTAARFIRGGGYKN 177 (379)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEeCCCCccCcHHHHHHHHhCCC-CCceeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999998754333456788999999998 79999999 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCc-
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKT- 336 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~- 336 (504)
||||++|.+|. +.+++|+. +..+|||||+|+||++++... .. +..+...+++..++.+..+..+....
T Consensus 178 vLVv~~e~~s~-~~~~~d~~---~~~lfGDGAaAvlL~~~~~~~----~~---i~~~~~~t~g~~~~~~~~~~~g~~~~~ 246 (379)
T PLN02326 178 VLVIGADALSR-YVDWTDRG---TCILFGDGAGAVVLQACDDDE----DG---LLGFDMHSDGNGHKHLHATFKGEDDDS 246 (379)
T ss_pred EEEEEechhcC-CCCccccC---ceEEEcceeEEEEEEEcCCCC----Cc---eEEEEEEEcCCCCCeEEecCCCCcccc
Confidence 99999999887 55566665 356999999999999875431 12 22233445555554443321111000
Q ss_pred ccccchhHHHHH-HHHHhhhhhhcCCCccchhhHHHHHHHH---HHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHH
Q 010687 337 GVSLSKDLMAIA-GMALKANITTLGPLVLPISEQLLFFATL---VAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVID 411 (504)
Q Consensus 337 g~~ls~dl~~v~-~~~lk~ni~~~gp~vlp~se~~~~~~~~---~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~ 411 (504)
...-..+..... ...-..++...|+.+ +.+.... ..+++++ ..+. .+|||||++||+|+++++
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~g~~v------~~~~~~~~~~~i~~~L~~~gl~------~~dId~~v~Hq~n~~~~~ 314 (379)
T PLN02326 247 SGGNTNGVGDFPPKKASYSCIQMNGKEV------FKFAVRCVPQVIESALQKAGLT------AESIDWLLLHQANQRIID 314 (379)
T ss_pred cccccccccccccccccccceEecCHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHH
Confidence 000000000000 000001123333222 1111111 1133333 2222 489999999999999999
Q ss_pred HHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 412 ELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 412 ~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
.+++.||++++++ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|++++|+|
T Consensus 315 ~~~~~Lgl~~ek~---~~~l~~~GNt~sAsi~~~L~~~~~~g~~~~Gd~vll~~~G~G~t~~~~ll~~ 379 (379)
T PLN02326 315 AVAQRLGIPPEKV---ISNLANYGNTSAASIPLALDEAVRSGKVKKGDVIATAGFGAGLTWGSAIVRW 379 (379)
T ss_pred HHHHHcCCCHHHe---eecHhhcCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEChhheeeEEEEEC
Confidence 9999999999999 5789999999999999999999999999999999999999999999999986
No 19
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.2e-45 Score=379.48 Aligned_cols=324 Identities=15% Similarity=0.189 Sum_probs=239.7
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQV 177 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 177 (504)
++++|.+++.|+|+ ++++|+++.+..+. +++ ++.+++||++|+++. ++. +.+|
T Consensus 3 ~~~~I~~~g~~lP~--~~v~~~~~~~~~~~----~~~------~i~~~~Gi~~R~~~~-~~~--------------~~~l 55 (329)
T PRK07204 3 RYISIKGIGTYLPK--RKVDSLELDKKLDL----PEG------WVLKKSGVKTRHFVD-GET--------------SSYM 55 (329)
T ss_pred CCcEEEEEEEeCCC--ceecHHHHHHhhCC----CHh------HhhhccCceEEeecC-CCC--------------HHHH
Confidence 46899999999999 89999999887652 333 688899999999987 432 6899
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCC-cceeEEecCCcchHHHHHHHHHHHHHhcCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRG-NIRSFNLGGMGCSAGVIAIDLAKDMLQVHRN 255 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~-~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~ 255 (504)
+.+|++++|+++|++|+|||+||+++ ++++..|+++.+|+++||+++ ++.++|++ +||++++.||++|.+++++++.
T Consensus 56 a~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~p~~a~~v~~~lgl~~~~~~~~~v~-~~C~~~~~al~~a~~~l~~g~~ 134 (329)
T PRK07204 56 GAEAAKKAVEDAKLTLDDIDCIICASGTIQQAIPCTASLIQEQLGLQHSGIPCFDIN-STCLSFITALDTISYAIECGRY 134 (329)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCccHHHHHHHHhCCCCCCceEEEcc-chhHHHHHHHHHHHHHHHCCCC
Confidence 99999999999999999999999986 466778999999999999985 47999999 6999999999999999999999
Q ss_pred CeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCC
Q 010687 256 TYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGK 335 (504)
Q Consensus 256 ~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~ 335 (504)
++||||++|.++. .++..++. +..+|||||+|+||++++.. .++. .++..++++.++....+..+..
T Consensus 135 ~~~Lvv~~e~~s~-~~~~~~~~---~~~lfGDGAaA~ll~~~~~~-----~~il---~~~~~t~~~~~~~~~~~~~~~~- 201 (329)
T PRK07204 135 KRVLIISSEISSV-GLNWGQNE---SCILFGDGAAAVVITKGDHS-----SRIL---ASHMETYSSGAHLSEIRGGGTM- 201 (329)
T ss_pred CEEEEEEeccccC-CCCcccCc---ceEEEecccEEEEEEEcCCC-----CcEE---EEEEEEecCCCCceEEecCCcC-
Confidence 9999999999887 33334443 45899999999999986542 2333 2333344433322222111000
Q ss_pred cccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHHH
Q 010687 336 TGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDELE 414 (504)
Q Consensus 336 ~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i~ 414 (504)
.+-..+. ...... ..+...|+.+. +.....+....+++++ ..+. .+|||+|++||+|+.+++.++
T Consensus 202 --~~~~~~~-~~~~~~--~~~~~~~~~~~---~~~~~~~~~~i~~~L~~~gl~------~~did~~~~H~~~~~~~~~i~ 267 (329)
T PRK07204 202 --IHPREYS-EERKED--FLFDMNGRAIF---KLSSKYLMKFIDKLLMDAGYT------LADIDLIVPHQASGPAMRLIR 267 (329)
T ss_pred --CCCcccc-cccccC--ceEEECCHHHH---HHHHHHHHHHHHHHHHHcCCC------HHHCCEEEeCCCCHHHHHHHH
Confidence 0000000 000000 00000111110 0000001111233443 2232 489999999999999999999
Q ss_pred HHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 415 KNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 415 ~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
+.|+++++++ ..++++||||+|+|++++|+++.++|++++||+|++++||+|++|+++++|+
T Consensus 268 ~~l~l~~e~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~ll~~ 329 (329)
T PRK07204 268 KKLGVDEERF---VTIFEDHGNMIAASIPVALFEAIKQKKVQRGNKILLLGTSAGLSIGGILLEY 329 (329)
T ss_pred HHcCCCHHHh---hhhHhhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhheeeEEeC
Confidence 9999999998 6899999999999999999999999999999999999999999999999985
No 20
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1.5e-45 Score=377.62 Aligned_cols=317 Identities=16% Similarity=0.271 Sum_probs=245.8
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQV 177 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~l 177 (504)
.+++|.++|+|+|+ ++++++|+.+..+. +++ ++.+++||++|+++++++. +.+|
T Consensus 3 ~~~~I~~ig~~~P~--~~v~~~e~~~~~~~----~~~------~i~~~~Gi~~r~~~~~~~~--------------~~~l 56 (325)
T PRK12879 3 SYARITGIGTYVPP--RVLTNDDLETFIDT----SDE------WIVQRTGIKERRIAHVEEY--------------TSDL 56 (325)
T ss_pred CCCEEEEEEEECCC--cEEcHHHHHHhcCC----CHH------HhhhccCceEEEECCCCCC--------------HHHH
Confidence 46899999999999 89999999887542 333 5889999999999877653 7899
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNT 256 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~ 256 (504)
+.+|++++|+++|++++|||.||++++ +++..|+.+.+|+++||++ ++.+++++ +||++++.||++|.++|++++.+
T Consensus 57 a~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~a~~l~~~lg~~-~~~~~~v~-~~C~~~~~al~~A~~~l~~g~~~ 134 (325)
T PRK12879 57 AIKAAERALARAGLDAEDIDLIIVATTTPDYLFPSTASQVQARLGIP-NAAAFDIN-AACAGFLYGLETANGLITSGLYK 134 (325)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHhCCC-CCcEEEEC-ccchHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999999998864 6788899999999999997 58999999 69999999999999999999999
Q ss_pred eEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCc
Q 010687 257 YAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKT 336 (504)
Q Consensus 257 ~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~ 336 (504)
+||||++|.+|. +.+..++. ..++|||||+|+||++++.. .+ +..+...++++.++.++.+..+.
T Consensus 135 ~~Lvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~---~~~~~~~~~~~~~~~~~~~~~~~--- 199 (325)
T PRK12879 135 KVLVIGAERLSK-VTDYTDRT---TCILFGDGAGAVVLEATENE-----PG---FIDYVLGTDGDGGDILYRTGLGT--- 199 (325)
T ss_pred EEEEEEehhhcC-cCCccccC---ceEEEeecceEEEEEecCCC-----CC---eEEEEEEEcCCCCCeEEEcCCCC---
Confidence 999999999887 33444554 45799999999999987643 12 23344455666555554332110
Q ss_pred ccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHH---HHHHHHHHh-hccCCccCcccccCEEEEcCCCHHHHHH
Q 010687 337 GVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFAT---LVAKKFSNA-KVKPYIPDFKLAFDHFCIHAGGRAVIDE 412 (504)
Q Consensus 337 g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~---~~~~~vl~~-~~~~~~p~~~~did~~~~Hq~g~~vl~~ 412 (504)
....+.. ..+..+...|. +.+.+..+ ...+++++. .+. .+|||+|++||+|+++++.
T Consensus 200 --~~~~~~~-----~~~~~~~~~~~------~~~~~~~~~~~~~i~~~L~~~g~~------~~did~~~~h~~~~~~~~~ 260 (325)
T PRK12879 200 --TMDRDAL-----SGDGYIVQNGR------EVFKWAVRTMPKGARQVLEKAGLT------KDDIDWVIPHQANLRIIES 260 (325)
T ss_pred --CCCcccc-----ccCccEEEcCH------HHHHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHHH
Confidence 0000000 00000111111 11111111 112344432 232 4899999999999999999
Q ss_pred HHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 413 LEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 413 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
+++.||++++++ ..++++|||++|+|+|++|++++++|++++||++++++||+|++++++++||
T Consensus 261 ~~~~lg~~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~~~~~~l~~~ 324 (325)
T PRK12879 261 LCEKLGIPMEKT---LVSVEYYGNTSAATIPLALDLALEQGKIKPGDTLLLYGFGAGLTWAALLVKW 324 (325)
T ss_pred HHHHcCCCHHHh---hhhHhhhCchHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhhhhEEEEEEe
Confidence 999999999999 4689999999999999999999999999999999999999999999999998
No 21
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=100.00 E-value=1.1e-45 Score=379.43 Aligned_cols=319 Identities=16% Similarity=0.257 Sum_probs=240.2
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
.|+|.++|.|+|+ ++++|+|+.+.++. ++ .+|.+++||++|+++.+++. +.+|+
T Consensus 2 ~v~I~~~g~~lP~--~~v~~~e~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (326)
T CHL00203 2 GVHILSTGSSVPN--FSVENQQFEDIIET----SD------HWISTRTGIKKRHLAPSSTS--------------LTKLA 55 (326)
T ss_pred ccEEEEEEEECCC--eEEcHHHHHHhcCC----Ch------hhEeeccCeEEEEeCCCCCC--------------HHHHH
Confidence 4899999999999 89999999988652 22 26889999999998876643 78999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+|++++|+++|++|+|||.||++|+ ++.. +..+..++++||++ ++.+++++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~aL~~ag~~~~dId~vi~~s~~~~~~-~~~~~~v~~~Lg~~-~~~~~~v~-~~Casg~~al~~A~~~i~sg~~~~ 132 (326)
T CHL00203 56 AEAANKALDKAHMDPLEIDLIILATSTPDDL-FGSASQLQAEIGAT-RAVAFDIT-AACSGFILALVTATQFIQNGSYKN 132 (326)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEeCCCCCC-CchHHHHHHHhCCC-CCceeeec-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999999874 4433 34578899999998 68899999 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCcc
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTG 337 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 337 (504)
+|||++|.+|. +.+++++. +..+|||||+|+||++.+.. .+. .....+|++.++.............
T Consensus 133 ~Lvv~~e~~s~-~~~~~~~~---~~~~fgDga~A~ll~~~~~~------~~~---~~~~~t~g~~~~~~~~~~~~~~~~~ 199 (326)
T CHL00203 133 ILVVGADTLSK-WIDWSDRK---TCILFGDGAGAAIIGASYEN------SIL---GFKLCTDGKLNSHLQLMNKPVNNQS 199 (326)
T ss_pred EEEEEehhhhC-cCCcccCC---ceEEEcceeeEEEEEEcCCC------CeE---EEEEEEcCCCcceEEecCCCCCccc
Confidence 99999999987 45556654 56899999999999986542 122 2233456555444332211000000
Q ss_pred cccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHH---HHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHH
Q 010687 338 VSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATL---VAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDEL 413 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~---~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i 413 (504)
+.-. ..+. .. ...+...|+.+ +++.... ..+++++ .++. .+|||||++||+|+++++.+
T Consensus 200 ~~~~-~~~~---~~-~~~~~~~g~~~------~~~~~~~~~~~i~~~L~~~g~~------~~did~~~~hq~~~~~~~~~ 262 (326)
T CHL00203 200 FGTT-KLPQ---GQ-YQSISMNGKEV------YKFAVFQVPAVIIKCLNALNIS------IDEVDWFILHQANKRILEAI 262 (326)
T ss_pred cccc-cccc---CC-cceEEECCHHH------HHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHHHH
Confidence 0000 0000 00 00112222211 1111111 1133333 2222 48999999999999999999
Q ss_pred HHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 414 EKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 414 ~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
++.||++++++ ..++++||||+|||+|++|++++++|++++||+|++++||+|++|+++|+||
T Consensus 263 ~~~lgl~~~k~---~~~l~~~Gn~~sasi~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~v~~~ 325 (326)
T CHL00203 263 ANRLSVPNSKM---ITNLEKYGNTSAASIPLALDEAIQNNKIQPGQIIVLSGFGAGLTWGAIVLKW 325 (326)
T ss_pred HHHhCCCHHHh---hhHHHhhCcHHHHHHHHHHHHHHHhCCCCCCCEEEEEEEchhhhheEEEEEe
Confidence 99999999999 5799999999999999999999999999999999999999999999999998
No 22
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=7.6e-45 Score=374.63 Aligned_cols=318 Identities=17% Similarity=0.228 Sum_probs=242.5
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcC---CCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTG---DFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEA 174 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~---~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea 174 (504)
++++|.+++.|+|+ ++++|+++.+.+.... ..++ +++.+++||++|++.++++. .
T Consensus 4 ~~v~I~~~g~~lP~--~~v~~~~~~~~~~~~~~~~~~~~------~~i~~~~Gi~~R~~~~~~~~--------------~ 61 (338)
T PRK09258 4 SNVAILSLAYELAP--VVVTSSEIEERLAPLYERLRLPP------GQLEALTGIRERRWWPEGTQ--------------L 61 (338)
T ss_pred cceEEEEEEecCCC--ccCcHHHHHHHhhhcccccCCCh------hHhhhhcCceeEecCCCCCC--------------H
Confidence 57999999999999 8999999998754211 1122 35788899999999865442 6
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
.+|+.+|++++|+++|++++|||.||++| ++++..|+++.+|++++|+++++.+||++ .||+|++.||++|.++++++
T Consensus 62 ~~la~~Aa~~aL~~ag~~~~~Id~li~~s~~~~~~~p~~a~~v~~~lgl~~~~~~~~v~-~~C~~~~~al~~A~~~i~~g 140 (338)
T PRK09258 62 SDGAIAAGRKALAEAGIDPSDIGLLINTSVCRDYLEPATACRVHHNLGLPKSCANFDVS-NACLGFLNGMLDAANMIELG 140 (338)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCChHHHHHHHHcCCCCCCceeehh-hhhHHHHHHHHHHHHHHHcC
Confidence 89999999999999999999999999886 46888999999999999998779999999 59999999999999999999
Q ss_pred CCCeEEEEEeccCcCCCcCCC------CcC------ccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCc
Q 010687 254 RNTYAVVVSTENITQNWYFGN------KKS------MLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDN 321 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~~~~~~~------dr~------~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~ 321 (504)
+.++||||++|.++. ++++. +.. ..+...+|||||+|+||++++... ..+++.. ....++++
T Consensus 141 ~~~~~Lvv~~e~~s~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~GDGA~A~ll~~~~~~~--~~~~~~~---~~~~~~~~ 214 (338)
T PRK09258 141 QIDYALVVSGESARE-IVEATIDRLLAPETTREDFAQSFATLTLGSGAAAAVLTRGSLHP--RGHRLLG---GVTRAATE 214 (338)
T ss_pred CCCEEEEEEecccch-hccchhhhhccCccchhhhhhccceEEecccceEEEEecCCCCC--Ccceeee---eeeecCCC
Confidence 999999999999887 32211 111 112357899999999999865421 1234433 22233443
Q ss_pred cccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEE
Q 010687 322 AFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHF 400 (504)
Q Consensus 322 ~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~ 400 (504)
.++.+... ...+..+.+.+....++ .... ..+++++ ..+. .+|||+|
T Consensus 215 ~~~~~~~~-------~~~~~~~~~~~~~~~~~------------------~~~~-~~~~~L~~~g~~------~~did~~ 262 (338)
T PRK09258 215 HHELCQGG-------RDGMRTDAVGLLKEGVE------------------LAVD-TWEAFLAQLGWA------VEQVDRV 262 (338)
T ss_pred cccccccC-------ccceEEcHHHHHHHHHH------------------HHHH-HHHHHHHHcCCC------HHHCCEE
Confidence 33321110 01122333332221111 0011 1133443 2222 3899999
Q ss_pred EEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 401 CIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 401 ~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
++||+|+++++.+++.||++++|+ ..++++||||+|+|++++|++++++|++++||+|++++||+|++|+++++||
T Consensus 263 i~H~~~~~~~~~~~~~lgl~~~k~---~~~~~~~GN~~sas~~~~L~~~~~~g~~~~Gd~vll~~~G~G~s~~~~~~~~ 338 (338)
T PRK09258 263 ICHQVGAAHTRAILKALGIDPEKV---FTTFPTLGNMGPASLPITLAMAAEEGFLKPGDRVALLGIGSGLNCSMLEVKW 338 (338)
T ss_pred ecCCCCHHHHHHHHHHhCCCHHHc---eehHhhhCCcHHhHHHHHHHHHHHhCCCCCCCEEEEEEechhHhhHhHeeeC
Confidence 999999999999999999999999 5788999999999999999999999999999999999999999999999986
No 23
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=100.00 E-value=4.4e-44 Score=365.32 Aligned_cols=318 Identities=19% Similarity=0.291 Sum_probs=244.3
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
+++|.++++|+|+ ++++++++.+..+. ++ +++.+++||++|+++++++. +.+|+
T Consensus 1 ~~~I~~i~~~lP~--~~~~~~~~~~~~~~----~~------~~~~~~~Gi~~r~~~~~~~~--------------~~~la 54 (320)
T cd00830 1 NARILGIGSYLPE--RVVTNDELEKRLDT----SD------EWIRTRTGIRERRIADPGET--------------TSDLA 54 (320)
T ss_pred CCEEEEEEEECCC--cEEcHHHHHHHcCC----CH------HHhhhccCceEEeeCCCCCC--------------HHHHH
Confidence 4799999999999 89999999988742 33 36789999999999987643 78999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+|++++|+++|+++++||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++++.++
T Consensus 55 ~~A~~~al~~ag~~~~~Id~li~~~~~~~~~~~~~~~~l~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 132 (320)
T cd00830 55 VEAAKKALEDAGIDADDIDLIIVATSTPDYLFPATACLVQARLGAK-NAAAFDIN-AACSGFLYGLSTAAGLIRSGGAKN 132 (320)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCcHHHHHHHHhCCC-CCcEeecc-ccchHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5667899999999999997 79999999 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCcc
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTG 337 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 337 (504)
||||++|.++. +.+++++. ...+|||||+|+||++++.. .++. .++..++++.++.+..+..+...
T Consensus 133 vLvv~~e~~s~-~~~~~~~~---~~~~~GDgAaA~ll~~~~~~-----~~i~---~~~~~~~~~~~~~~~~~~~~~~~-- 198 (320)
T cd00830 133 VLVVGAETLSR-ILDWTDRS---TAVLFGDGAGAVVLEATEED-----PGIL---DSVLGSDGSGADLLTIPAGGSRS-- 198 (320)
T ss_pred EEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEecCCC-----CcEE---EEEEEEcCCCCCeEEeCCCCcCC--
Confidence 99999999887 33334443 46899999999999987642 3333 34455666667766655322110
Q ss_pred cccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHHHHH
Q 010687 338 VSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 416 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i~~~ 416 (504)
+. +... .-...+...++.+. +.....+....+++++ ..+. .+|||+|++||+|+++++.+++.
T Consensus 199 -~~--~~~~----~~~~~~~~~~~~~~---~~~~~~~~~~i~~~l~~~g~~------~~di~~~~~h~~~~~~~~~~~~~ 262 (320)
T cd00830 199 -PF--EDAE----GGDPYLVMDGREVF---KFAVRLMPESIEEALEKAGLT------PDDIDWFVPHQANLRIIEAVAKR 262 (320)
T ss_pred -cc--cccc----ccCccEEEcChHHH---HHHHHhhHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHHHHHHH
Confidence 00 0000 00000111111110 0000000011133333 2232 48999999999999999999999
Q ss_pred cCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheee
Q 010687 417 LQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVW 477 (504)
Q Consensus 417 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~ 477 (504)
||++++++ ..++++|||++|+|++++|+++.++|++++||+|++++||+|++|+++++
T Consensus 263 lgl~~~~~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~G~~vll~~~G~G~~~~~~l~ 320 (320)
T cd00830 263 LGLPEEKV---VVNLDRYGNTSAASIPLALDEAIEEGKLKKGDLVLLLGFGAGLTWGAALL 320 (320)
T ss_pred hCCCHHHh---hhhHHhhCcHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchHHhhHHhhC
Confidence 99999999 57999999999999999999999999999999999999999999999875
No 24
>PRK06840 hypothetical protein; Validated
Probab=100.00 E-value=7.4e-44 Score=367.68 Aligned_cols=327 Identities=18% Similarity=0.183 Sum_probs=243.3
Q ss_pred CCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHH
Q 010687 97 PRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQ 176 (504)
Q Consensus 97 ~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~ 176 (504)
|++++|.+++.|+|+ ++++++++.+..+. +++ ++.+++||++|+++++++. ..+
T Consensus 2 ~~~v~I~~~~~~lP~--~~v~~~~l~~~~g~----~~~------~~~~~~Gi~~r~~~~~~~~--------------~~~ 55 (339)
T PRK06840 2 EMNVGIVGTGVYLPK--DVMTAEEIAEKTGI----PEE------VVIEKFGIYEKPVPGPEDH--------------TSD 55 (339)
T ss_pred CCceEEEEEEEeCCC--cccCHHHHHHHhCC----CHH------HHhhhcCcceEeeCCCCCC--------------HHH
Confidence 568999999999999 89999999887652 333 5778999999999876543 789
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeec--CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc-C
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVNCS--LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV-H 253 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~~s--~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a-~ 253 (504)
|+.+|++++|+++|++|+|||.||++++ +++..|+.+.+|++++|++ ++.+++++ +||++++.||++|.+++++ +
T Consensus 56 la~~Aa~~aL~~ag~~~~dId~li~~~~~~~~~~~p~~a~~l~~~lGl~-~~~~~~v~-~~C~~~~~al~~A~~~l~~~g 133 (339)
T PRK06840 56 MAIAAAKPALKQAGVDPAAIDVVIYIGSEHKDYPVWSSAPKIQHEIGAK-NAWAFDIM-AVCASFPIALKVAKDLLYSDP 133 (339)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCCCCchHHHHHHHhCCC-Cccccccc-ccchHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999999997643 4678999999999999997 68999999 6999999999999999999 6
Q ss_pred CCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCC
Q 010687 254 RNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNA 333 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~ 333 (504)
..+++|||++|..+. +.+..++... ....|||||+|+||++++.. .++ +.+...+|++.++.+..+.++.
T Consensus 134 ~~~~~Lvv~~~~~s~-~~~~~~~~~~-~~~~~GDgAaA~ll~~~~~~-----~~i---l~~~~~t~~~~~~~~~~~~~g~ 203 (339)
T PRK06840 134 SIENVLLVGGYRNSD-LVDYDNPRTR-FMFNFAAGGSAALLKKDAGK-----NRI---LGSAIITDGSFSEDVRVPAGGT 203 (339)
T ss_pred CccEEEEEeeccccc-ccCcCCCCee-eeccCCCceeEEEEEecCCC-----Cce---EEEEEEEcCCccceEEecCCCc
Confidence 678999999999887 3333333310 01247999999999986542 333 3344566776666655443221
Q ss_pred CCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHH----HHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHH
Q 010687 334 GKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLL----FFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRA 408 (504)
Q Consensus 334 g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~----~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~ 408 (504)
. .+.+.+.... + +..+...++..+ ...+. .......+++++ .++. .+|||+|++||.|++
T Consensus 204 ~---~~~~~~~~~~-~---~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~L~~~gl~------~~did~~~~h~~~~~ 268 (339)
T PRK06840 204 K---QPASPETVEN-R---QHYLDVIDPESM--KERLDEVSIPNFLKVIREALRKSGYT------PKDIDYLAILHMKRS 268 (339)
T ss_pred C---CCCccccccc-c---cceEEEcCcHHH--HHHhHhhHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCcCHH
Confidence 1 1111110000 0 000000111100 00000 001111233443 2333 489999999999999
Q ss_pred HHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEee
Q 010687 409 VIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQAL 480 (504)
Q Consensus 409 vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~ 480 (504)
+++.+++.||++++++ . ++++||||+|+|++++|++++++|++++||++++++||+|++|+++++||.
T Consensus 269 ~~~~~~~~Lgl~~~~~---~-~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~ill~~~G~G~s~~~~~l~~~ 336 (339)
T PRK06840 269 AHIALLEGLGLTEEQA---I-YLDEYGHLGQLDQILSLHLALEQGKLKDGDLVVLVSAGTGYTWAATVIRWG 336 (339)
T ss_pred HHHHHHHHcCCCHHHe---E-eHHhccchhhhhHHHHHHHHHHcCCCCCCCEEEEEEEehhhheeEEEEEec
Confidence 9999999999999997 2 689999999999999999999999999999999999999999999999984
No 25
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=100.00 E-value=5.6e-44 Score=365.03 Aligned_cols=312 Identities=22% Similarity=0.329 Sum_probs=245.8
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
.++|.++++|+|+ ++++++++.+..+. ++ .++.+++|+++|++..+++. +.+|+
T Consensus 2 ~~~I~~i~~~~P~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 55 (318)
T TIGR00747 2 YAGILGTGSYLPE--KVLTNADLEKMVDT----SD------EWIVTRTGIKERRIAADDET--------------SSTMG 55 (318)
T ss_pred CCEEEEEEEECCC--ceecHHHHHHhcCC----ch------HHeecccCceEEEECCCCCC--------------HHHHH
Confidence 4899999999999 89999999887652 22 25788999999999877653 78999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+|++++|+++|++|+|||.+|++++ +++..|+.+.++++++|++ ++.+++++ +||++++.||++|.++++++..++
T Consensus 56 ~~A~~~al~~agl~~~~Id~~i~~~~~~~~~~~~~a~~l~~~lGl~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 133 (318)
T TIGR00747 56 FEAAKRAIENAGISKDDIDLIIVATTTPDHAFPSAACMVQAYLGIK-GIPAFDLS-AACAGFIYALSVAKQYIESGKYKT 133 (318)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCChHHHHHHHHhCCC-CCcEeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 6777899999999999998 68999998 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCC---
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAG--- 334 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g--- 334 (504)
+|||++|..+. +.++.++. ...+|||||+|+||++++... + +..+...++++.++.++.+.++..
T Consensus 134 ~Lvv~~e~~~~-~~~~~~~~---~~~~~GDGAaA~lL~~~~~~~-----~---i~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (318)
T TIGR00747 134 VLVVGAEKLSS-TLDWTDRG---TCVLFGDGAGAVVLGESEDPG-----G---IISTHLGADGTQGEALYLPAGGRPTSG 201 (318)
T ss_pred EEEEEehhhcC-cCCcCCCC---eEEEEecceeEEEEeecCCCC-----c---EEEEEEEEcCCCcceEEECCCCcCCCC
Confidence 99999999876 44445554 357899999999999876531 2 334455567766666665543211
Q ss_pred CcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHH
Q 010687 335 KTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDEL 413 (504)
Q Consensus 335 ~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i 413 (504)
..++ +...++.++ .+...... ...+++++ ..++ .+||++|++||+++++++.+
T Consensus 202 ~~~~-----------------~~~~~~~~~--~~~~~~~~-~~~~~~l~~~g~~------~~di~~~~~h~~~~~~~~~~ 255 (318)
T TIGR00747 202 PSPF-----------------ITMEGNEVF--KHAVRKMG-DVVEETLEANGLD------PEDIDWFVPHQANLRIIEAL 255 (318)
T ss_pred CCCc-----------------eEECCHHHH--HHHHHHHH-HHHHHHHHHcCCC------HHHCCEEEECCCCHHHHHHH
Confidence 0000 000111000 00000011 11233443 2333 38999999999999999999
Q ss_pred HHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 414 EKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 414 ~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
++.||++++|+ ..++++||||+|+|++++|+++.++|++++||+|+++++|+|++|+++++||
T Consensus 256 ~~~lgi~~~k~---~~~~~~~Gn~~sas~~~~L~~~~~~~~~~~Gd~vll~~~G~G~t~~~~~l~~ 318 (318)
T TIGR00747 256 AKRLELDMSQV---VKTVHKYGNTSAASIPLALDELLRTGRIKPGDLLLLVAFGGGLTWGAALVRF 318 (318)
T ss_pred HHHcCCCHHHe---eehHhhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEehhheeeEEEEEC
Confidence 99999999999 4789999999999999999999999999999999999999999999999987
No 26
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=3.7e-42 Score=351.61 Aligned_cols=311 Identities=22% Similarity=0.311 Sum_probs=242.4
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
.|+|.++++|+|+ ++++++++.+..+. ++ ++|.+++|+++|+++.+++. ..+|+
T Consensus 3 ~v~I~ai~~~lP~--~~~~~~~~~~~~~~----~~------~~i~~~~gi~~r~~~~~~~~--------------~~~la 56 (319)
T PRK09352 3 YAKILGTGSYLPE--RVVTNDDLEKMVDT----SD------EWIVTRTGIKERRIAAPDET--------------TSDLA 56 (319)
T ss_pred ceEEEEEEEECCC--eEEcHHHHHHHcCC----CH------HHhhhhcCeEEEEeCCCCCC--------------HHHHH
Confidence 6899999999999 89999999987652 33 26788999999998766543 78999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+|++++|+++|+++++||.+|++++ ++...|+.+..|+.++|++ ++.+++++ ++|++++.||.+|.+++++|+.++
T Consensus 57 ~~A~~~al~~agl~~~~id~vi~~~~~~~~~~~~~~~~i~~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~i~~g~~~~ 134 (319)
T PRK09352 57 TEAAKKALEAAGIDPEDIDLIIVATTTPDYAFPSTACLVQARLGAK-NAAAFDLS-AACSGFVYALSTADQFIRSGAYKN 134 (319)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCchHHHHHHHHhCCC-CCcEeecc-ccchhHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5666899999999999996 78999999 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCcc
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTG 337 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 337 (504)
|||+++|.++. +++..++. ...+|||||+|+||++++.. + +..++..++++.++.+..+.++...
T Consensus 135 vLvv~~e~~s~-~~~~~~~~---~~~~~gDGaaA~ll~~~~~~------~---~~~~~~~~~~~~~~~~~~~~~~~~~-- 199 (319)
T PRK09352 135 VLVIGAEKLSR-IVDWTDRS---TCVLFGDGAGAVVLGASEEP------G---ILSTHLGSDGSYGDLLYLPGGGSRG-- 199 (319)
T ss_pred EEEEEehhhcc-ccCcccCC---ceEEEeccceEEEEEEcCCC------C---eEEEEEEEcCCCCCeEEeCCCCCCC--
Confidence 99999999887 44444544 35799999999999987642 1 2233444566555554444322110
Q ss_pred cccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHH---HHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHH
Q 010687 338 VSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATL---VAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDEL 413 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~---~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i 413 (504)
+... ..+...|.. .++.+... ..+++++ ..+. .+||++|++||+|+.+++.+
T Consensus 200 -~~~~-----------~~~~~~~~~------~~~~~~~~~~~~i~~~l~~~g~~------~~di~~~~~h~~~~~~~~~~ 255 (319)
T PRK09352 200 -PASP-----------GYLRMEGRE------VFKFAVRELAKVAREALEAAGLT------PEDIDWLVPHQANLRIIDAT 255 (319)
T ss_pred -CCCC-----------CceEECCHH------HHHHHHHHHHHHHHHHHHHcCCC------HHHCCEEEECCCCHHHHHHH
Confidence 0000 000001100 00111111 1133343 2333 48999999999999999999
Q ss_pred HHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEe
Q 010687 414 EKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 414 ~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
++.||++++++ ..++++|||++++|++++|++++++|++++||++++++||+|++|+++++||
T Consensus 256 ~~~lg~~~~~~---~~~~~~~Gn~~~a~~~~~L~~~~~~g~~~~Gd~vll~s~G~G~~~~~~ll~~ 318 (319)
T PRK09352 256 AKKLGLPMEKV---VVTVDKYGNTSAASIPLALDEAVRDGRIKRGDLVLLEGFGGGLTWGAALVRW 318 (319)
T ss_pred HHHhCCCHHHh---hhhHHhhCCHHHHHHHHHHHHHHHcCCCCCCCEEEEEEEchhheeEEEEEEe
Confidence 99999999998 5789999999999999999999999999999999999999999999999997
No 27
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=1e-41 Score=356.93 Aligned_cols=346 Identities=18% Similarity=0.229 Sum_probs=238.7
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
+|+|.++|+|+|+ ++++|+++.+.++......+ ...++|++++||++|+++.++.. .+.. ...+|+
T Consensus 2 ~v~I~gig~~lP~--~~v~n~~~~~~~~~~~~~~~---~~~~~i~~~~Gi~~R~~~~~~~~--~~~~-------~~~~La 67 (378)
T PRK06816 2 NVYITSTGAFLPG--EPVSNDEMEAYLGLINGKPS---RARRIILRNNGIKTRHYALDPEG--RPTH-------SNAQMA 67 (378)
T ss_pred CeEEEeeeecCCC--CccCHHHHHHHHhhccCCcH---HHHHHHHHhCCCceEEEEECCCC--CCCC-------CHHHHH
Confidence 5899999999999 89999999987764221111 12358999999999999754321 0111 268999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+|++++|+++|++|+|||.||++| ++++..|+.+..|+++||++ ++.+++++ ++|+|++.||++|.+++++++.++
T Consensus 68 ~~A~~~aL~~agi~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~-~~~~~~v~-~~Cas~~~al~~A~~~i~sg~~~~ 145 (378)
T PRK06816 68 AEAIRDLLDDAGFSLGDIELLACGTSQPDQLMPGHASMVHGELGAP-PIEVVSSA-GVCAAGMMALKYAYLSVKAGESRN 145 (378)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEECCCCcCChHHHHHHHhhCCCC-CCceeeec-CcCHHHHHHHHHHHHHHHCCCCCE
Confidence 9999999999999999999999986 46678899999999999998 58899998 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCC------------cC--c----cccccccccccEEEEEeccccccccccceEeeEEEEeecCC
Q 010687 258 AVVVSTENITQNWYFGNK------------KS--M----LIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGAD 319 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~d------------r~--~----l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d 319 (504)
||||++|.+|..+ ++++ +. . -..+.+|||||+|+||++.+... +..+ ++...+..++
T Consensus 146 vLvv~~E~~s~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fGDGA~A~vl~~~~~~~---g~~l-~~~~~~~~~~ 220 (378)
T PRK06816 146 AVATASELASRWF-RASRFEAEEEKLAELEENPEIAFEKDFLRWMLSDGAGAVLLENKPRPD---GLSL-RIDWIDLRSY 220 (378)
T ss_pred EEEEeEccchhhh-hhhhhhhHHHHhhcCcccCCCCCCCCCCCEeeecccEEEEEEecCCCC---CceE-EEEEEeeecc
Confidence 9999999998743 2111 10 0 00135799999999999865421 1111 1111122222
Q ss_pred CccccceeecccCC---C-Ccccc-cchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCc
Q 010687 320 DNAFKCVYQEQDNA---G-KTGVS-LSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDF 393 (504)
Q Consensus 320 ~~~~~~~~~~~d~~---g-~~g~~-ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~ 393 (504)
...++.++...... + ..++. ...+-+...+ +..+...+..+ .+..........+++++ ..++
T Consensus 221 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~---~~~~~~~~~~~i~~~L~~~gl~------ 288 (378)
T PRK06816 221 AGELPVCMYAGAEKNEDGSLKGWSDYPPEEAEAAS---ALSLKQDVRLL---NENIVVYTIKPLLELVDKRNLD------ 288 (378)
T ss_pred cccCccceecCCccCCCCCccCcccCCHHHHHhcc---CchHHhHHHHH---HHHhHHHHHHHHHHHHHHcCCC------
Confidence 22222222211000 0 00000 0111000000 00011111000 00000010111233443 2333
Q ss_pred ccccCEEEEcCCCHHHHHHHHHHc-----CCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeech
Q 010687 394 KLAFDHFCIHAGGRAVIDELEKNL-----QLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGS 468 (504)
Q Consensus 394 ~~did~~~~Hq~g~~vl~~i~~~L-----gl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~ 468 (504)
.+|||+|++||+|.++++.+.+.| |++++|+ ..++++||||+|||+|++|++++++|++++||+|++++.|+
T Consensus 289 ~~DId~~v~Hq~n~~~~~~v~~~l~~~~~gl~~~k~---~~~~~~~GNt~sAsipi~L~~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 289 PDDIDYFLPHYSSEYFREKIVELLAKAGFMIPEEKW---FTNLATVGNTGSASIYIMLDELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred hhhCCEEeeCcccHHHHHHHHHHHHhccCCCChhhe---EEeccccccccchHHHHHHHHHHHcCCCCCCCEEEEEEecc
Confidence 489999999999999999999987 8999998 68999999999999999999999999999999999998876
Q ss_pred h-HHhhheeeEee
Q 010687 469 G-FKCNSAVWQAL 480 (504)
Q Consensus 469 G-~~~~sav~r~~ 480 (504)
| +.++.++++|.
T Consensus 366 ~~~~~~~~~~~~~ 378 (378)
T PRK06816 366 GRFSTAFMLLTVV 378 (378)
T ss_pred cchhheeEEEEEC
Confidence 6 99999999874
No 28
>PRK04262 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-42 Score=355.22 Aligned_cols=310 Identities=17% Similarity=0.222 Sum_probs=234.7
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
.++|.+++.|+|+ ++++|+++.+..+. +++ ++.+++||.+|+++++++. +.+|+
T Consensus 2 ~v~I~~~g~ylP~--~~v~~~el~~~~~~----~~~------~i~~~~Gi~~R~~~~~~~~--------------~~~la 55 (347)
T PRK04262 2 MVGIVGYGAYIPR--YRIKVEEIARVWGD----DPE------AIKRGLGVEEKSVPGPDED--------------TATIA 55 (347)
T ss_pred ceeEEEEEEeCCC--EEecHHHHHHHhCc----CHH------HHhhccCeeeeecCCCCcC--------------HHHHH
Confidence 5899999999999 99999999988652 443 7899999999999877653 78999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+|++++|+++|++|+|||.||++| ++++..|+.+.+|+++||+++++.++|++ +||++++.||++|.+++++++.++
T Consensus 56 ~~Aa~~aL~~ag~~~~dId~li~~s~~~~~~~p~~a~~v~~~Lgl~~~~~~~dv~-~~C~~~~~aL~~A~~~i~sg~~~~ 134 (347)
T PRK04262 56 VEAARNALKRAGIDPKEIGAVYVGSESHPYAVKPTATIVAEALGATPDLTAADLE-FACKAGTAALQAAMGLVKSGMIKY 134 (347)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEecCCCcccccHHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCE
Confidence 9999999999999999999999886 46778899999999999998678899998 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCcc
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTG 337 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 337 (504)
||||++|... .++.++. ...|||||+|+||++++. ..++.+... ..+|+ .+.+..+.......+
T Consensus 135 aLVv~~e~~~---~~~~~~~----~~~~GDGA~A~ll~~~~~-----~~~i~~~~~--~~~d~--~d~~~~~~~~~~~~~ 198 (347)
T PRK04262 135 ALAIGADTAQ---GAPGDAL----EYTAAAGGAAFIIGKEEV-----IAEIEATYS--YTTDT--PDFWRREGEPYPRHG 198 (347)
T ss_pred EEEEEEeeec---cCCCCCC----CCcCCCCcEEEEEecCcc-----cceeecccc--ccccc--hhhcCCCCCcCCCcC
Confidence 9999999842 2233433 246799999999997442 233332211 11222 121111100000000
Q ss_pred cccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHHHHH
Q 010687 338 VSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 416 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i~~~ 416 (504)
..++++ +.. ++... ...+++++ ..+. .+|||+|++||+|+++++.+++.
T Consensus 199 ~~~~~~-~~~----------------------~~~~~-~~i~~~L~~~gl~------~~dId~~v~Hq~n~~~~~~~~~~ 248 (347)
T PRK04262 199 GRFTGE-PAY----------------------FKHII-SAAKGLMEKLGLK------PSDYDYAVFHQPNGKFPLRVAKM 248 (347)
T ss_pred ceecch-HHH----------------------HHHHH-HHHHHHHHHhCcC------HHHhceeecCCCchHHHHHHHHH
Confidence 111110 000 00111 11234443 2333 48999999999999999999999
Q ss_pred cCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeeccCC
Q 010687 417 LQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVK 484 (504)
Q Consensus 417 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~ 484 (504)
||++++|+..+. ++++||||||||+|++|+++.+ ++++||+|++++||+|+++.+.+||+.+...
T Consensus 249 Lgl~~ek~~~~~-~~~~~GNt~sAsi~~~L~~~~~--~~~~Gd~vll~~~G~G~~~~~~~~~~~~~~~ 313 (347)
T PRK04262 249 LGFTKEQVKPGL-LTPYIGNTYSGSALLGLAAVLD--VAKPGDRILVVSFGSGAGSDAFSITVTDAIE 313 (347)
T ss_pred cCCCHHHhhccc-hhhhhCChHHHHHHHHHHHHHH--hCCCCCEEEEEecCCCcceeeEEEEechhHH
Confidence 999999996433 6899999999999999999987 4899999999999999999999999987654
No 29
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=100.00 E-value=1.6e-41 Score=351.25 Aligned_cols=315 Identities=16% Similarity=0.197 Sum_probs=235.5
Q ss_pred eEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHHH
Q 010687 100 IYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVMF 179 (504)
Q Consensus 100 v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 179 (504)
++|.++|+|+|+ ++++|+++.+..+. +++ ++.+++||++|+++++++. +.+|+.
T Consensus 2 ~~I~g~g~~lP~--~~v~n~~l~~~~~~----~~~------~i~~~~Gi~~r~v~~~~~~--------------~~~la~ 55 (345)
T TIGR00748 2 AGIVGYGAYIPM--YRIKVEEIARVWGK----DPE------SISNGLPVEEKAVPGLDED--------------TATIGV 55 (345)
T ss_pred ccEEEEEEeCCC--eeecHHHHHHHhCC----CHh------HeeeccceeeeecCCCCCC--------------HHHHHH
Confidence 689999999999 89999998877552 443 6888999999999987654 789999
Q ss_pred HHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeE
Q 010687 180 GALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYA 258 (504)
Q Consensus 180 ~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~a 258 (504)
+|+++||+++|++|+|||.||++| ++++..|+.+..+++++|+++++.++|++ .||+|++.||++|.++++++..++|
T Consensus 56 ~Aa~~aL~~agl~~~dID~li~~s~~~~~~~p~~a~~v~~~LGl~~~~~~~dv~-~aC~g~~~al~~A~~~i~sg~~~~v 134 (345)
T TIGR00748 56 EAARNALKRAKIDPKDIGAVYVGSESHPYAVKPTATIVAEAIGATPDLTAADLE-FACKAGTAGIQACMGLVASGMIKYG 134 (345)
T ss_pred HHHHHHHHHcCCCHHHCCEEEEEecCCCccccchHHHHHHHcCCCCCceEEEHH-HhHHHHHHHHHHHHHHHHcCCCCEE
Confidence 999999999999999999999886 46777899999999999997778999999 5999999999999999999999999
Q ss_pred EEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCc-cccceeecccCCCCcc
Q 010687 259 VVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDN-AFKCVYQEQDNAGKTG 337 (504)
Q Consensus 259 LVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~-~~~~~~~~~d~~g~~g 337 (504)
|||++|..+.. +.|+. ...|||||+|+||++.+.. .++.+.. ...+|+. .++. +.......+
T Consensus 135 LVv~~d~~~~~---~~~~~----~~~~GDGAaA~vl~~~~~~-----~~~~~~~--~~~~d~~~~~~~---~~~~~~~~~ 197 (345)
T TIGR00748 135 LAIGADTAQGA---PGDAL----EYTAGAGGAAYIIGEKNTV-----AYFEGTY--SYTTDTPDFWRR---EGEPYPRHG 197 (345)
T ss_pred EEEEEeecccC---CCccC----cccCCCceEEEEEccCCcc-----eEeeccc--ceeccccccccc---CCCcCCCcC
Confidence 99999998642 23432 3568999999999965421 1221111 1122221 1110 000000000
Q ss_pred cccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHh-hccCCccCcccccCEEEEcCCCHHHHHHHHHH
Q 010687 338 VSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNA-KVKPYIPDFKLAFDHFCIHAGGRAVIDELEKN 416 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~-~~~~~~p~~~~did~~~~Hq~g~~vl~~i~~~ 416 (504)
.....+ + +-++++... .+++++. .+. .+|||+|++||+|.++++.+.+.
T Consensus 198 ~~~~~~-~----------------------~~~~~~~~~-~~~~L~~~gl~------~~did~~i~Hq~~~~~~~~~~~~ 247 (345)
T TIGR00748 198 GRFTGE-P----------------------AYFHHVVTA-AKGLMEKLGLT------PEDFDYAVFHQPNGKFYLVAARM 247 (345)
T ss_pred CeecCh-H----------------------HHHHHHHHH-HHHHHHHcCCC------HHHcCEEEeCCCChHHHHHHHHH
Confidence 000000 0 011122211 2344432 333 38999999999999999999999
Q ss_pred cCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeeccCCCCCCCCCcc
Q 010687 417 LQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVKPSPNSPWED 493 (504)
Q Consensus 417 Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~~~~~~~w~~ 493 (504)
||++++++..+ .+.++||||+|||+|+.|+++++ ++++||+|++++||+|++|++++|+|.+.... ..||.-
T Consensus 248 lgl~~ek~~~~-~~~~~~GNt~sAsipl~L~~~~~--~~~~Gd~vll~~~G~G~s~~~~~~~~~~~~~~--~~~~~~ 319 (345)
T TIGR00748 248 LGFPKEQVKPG-LLTPRIGNTYSGATPVGLSAVLD--IAEPGDRILAVSYGSGAGSDAFSIVVQDAIEE--KRDLAP 319 (345)
T ss_pred cCCCHHHeecc-ccccccCchhhhHHHHHHHHHHH--hcCCCCEEEEEEecCCcceeEEEEEEchhHHH--Hhhhhh
Confidence 99999998421 13489999999999999999986 68999999999999999999999999876653 246853
No 30
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=100.00 E-value=4.4e-40 Score=343.92 Aligned_cols=342 Identities=14% Similarity=0.189 Sum_probs=235.1
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhc-CCCChhh---H----------HHHHHHHHHhCCCceEeccCC----CcC
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLT-GDFDESS---L----------EFQRKILERSGLGEETYVPDA----MHY 160 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~-~~~~~~~---~----------~f~~~i~~~sGi~~r~~~~~~----~~~ 160 (504)
+|+|+++|+|+|+ ++++|+|+.+.++.. .+|.++. + ...++|.+++||++|+++.+. ...
T Consensus 2 ~~~I~~~g~~lP~--~~v~n~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~Gi~~R~~~~~~~~~~~~~ 79 (372)
T PRK07515 2 NVVISGTGLYTPP--ESISNEELVASFNAYVERFNAENAAAIAAGEVEALQPSSSEFIEKASGIKSRYVMDKEGILDPDR 79 (372)
T ss_pred CcEEEEEEeecCC--ccccHHHHHHHHhhhhhhhcccchhhhccccccccCCCCHHHhhhccCCceEEEecccccCcccc
Confidence 5899999999999 899999998875321 1111000 0 013578999999999997532 111
Q ss_pred CCCC--CcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcch
Q 010687 161 LPPR--PSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCS 237 (504)
Q Consensus 161 ~~~~--~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCs 237 (504)
.++. .+.......+.+|+.+|++++|+++|++++|||.||++|+ +++..|+.+.+|+++||++ ..+++++ ++|+
T Consensus 80 ~~~~~~~r~~~~~~~~~~la~~Aa~~aL~~agl~~~~Id~li~~~~~~~~~~p~~a~~v~~~Lgl~--~~~~~v~-~aCa 156 (372)
T PRK07515 80 MRPRIPERSNDELSIQAEMGVAAARQALARAGRTAEDIDAVIVACSNMQRAYPAMAIEIQQALGIE--GFAFDMN-VACS 156 (372)
T ss_pred cCcccccccccchhhHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCcHHHHHHHHhcCCC--CcEEEec-chhH
Confidence 1110 0111112346789999999999999999999999998865 5778999999999999996 5789998 7999
Q ss_pred HHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeec
Q 010687 238 AGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKG 317 (504)
Q Consensus 238 g~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~ 317 (504)
+++.||.+|.++++++..++||||++|.++.. .++.|+. +..+|||||+|+||++.+....+.++++.+.. ..
T Consensus 157 sg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~-~~~~d~~---~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~---~~ 229 (372)
T PRK07515 157 SATFGIQTAANAIRSGSARRVLVVNPEICSGH-LNFRDRD---SHFIFGDVATAVIVERADTATSAGGFEILGTR---LF 229 (372)
T ss_pred HHHHHHHHHHHHHHcCCCCEEEEEeeeccccc-ccccCCC---CCEEecCccEEEEEeeccccccCCCceEEEEE---ee
Confidence 99999999999999999999999999998873 3445665 46899999999999986543222345554432 11
Q ss_pred CCCccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHH---HHHHHHHH-hhccCCccCc
Q 010687 318 ADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFAT---LVAKKFSN-AKVKPYIPDF 393 (504)
Q Consensus 318 ~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~---~~~~~vl~-~~~~~~~p~~ 393 (504)
++. .+.+..+. |. +.+...+-+.. ...++...|..+ ++++.. ...+++++ ..++
T Consensus 230 ~~~--~~~~~~~~---G~-~~~~~~~~~~~----~~~~~~~~g~~~------~~~~~~~~~~~i~~~L~~~gl~------ 287 (372)
T PRK07515 230 TQF--SNNIRNNF---GF-LNRADPEGIGA----RDKLFVQEGRKV------FKEVCPMVAEHIVEHLAENGLT------ 287 (372)
T ss_pred ccc--ccceecCC---CC-CCCCCcccccc----ccceEEeccHHH------HHHHHHHHHHHHHHHHHHcCCC------
Confidence 211 11111110 10 00000000000 000011112111 111111 11234443 2333
Q ss_pred ccccCEEEEcCCCHHHHHHHHHH-cCCC--chhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhH
Q 010687 394 KLAFDHFCIHAGGRAVIDELEKN-LQLL--PEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGF 470 (504)
Q Consensus 394 ~~did~~~~Hq~g~~vl~~i~~~-Lgl~--~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~ 470 (504)
.+|||+|++||+|.++++.+.+. ||++ +++. +.++++||||+|+|++++|+++. +++++||+|++++||+|+
T Consensus 288 ~~dId~~~~Hq~~~~~~d~~~~~llg~~~~~~~~---~~~~~~~GNt~sasi~~~L~~~~--~~~~~Gd~vll~~~G~G~ 362 (372)
T PRK07515 288 PADVKRFWLHQANINMNQLIGKKVLGRDATPEEA---PVILDEYANTSSAGSIIAFHKHS--DDLAAGDLGVICSFGAGY 362 (372)
T ss_pred HHHCCEEEECCCCHHHHHHHHHHhccCCCChhhc---eEeHHhcCCchhhHHHHHHHHHh--ccCCCCCEEEEEEecccH
Confidence 38999999999999999999988 5654 4444 68999999999999999999984 578999999999999999
Q ss_pred HhhheeeEe
Q 010687 471 KCNSAVWQA 479 (504)
Q Consensus 471 ~~~sav~r~ 479 (504)
+|+++++|.
T Consensus 363 ~~~~~ll~~ 371 (372)
T PRK07515 363 SIGSVIVRK 371 (372)
T ss_pred HHHHHHhcc
Confidence 999999874
No 31
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=100.00 E-value=2.7e-39 Score=330.62 Aligned_cols=320 Identities=21% Similarity=0.270 Sum_probs=235.0
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
.|+|.++++|+|+ ++++++++.+..+. + ++.+++||++|++..+++. ..+|+
T Consensus 1 ~v~I~~i~~~lP~--~~v~~~~~~~~~~~----~--------~~~~~~gi~~r~~~~~~~~--------------~~~l~ 52 (324)
T cd00827 1 DVGIEAIGAYLPR--YRVDNEELAEGLGV----D--------PGKYTTGIGQRHMAGDDED--------------VPTMA 52 (324)
T ss_pred CccEEEEEecCCc--eeecHHHHHHHhCC----C--------cceeeeecceeEecCCCCC--------------HHHHH
Confidence 4789999999999 89999999887652 1 4677899999999876432 68999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
.+|++++|+++|++++|||.||++++ ++...|+.+.+|++++|++ ++.+++++ +||++++.||.+|.++++++..++
T Consensus 53 ~~a~~~aL~~ag~~~~~Id~li~~~~~~~~~~~~~~~~i~~~lg~~-~~~~~~v~-~~C~s~~~al~~A~~~i~~g~~~~ 130 (324)
T cd00827 53 VEAARRALERAGIDPDDIGLLIVATESPIDKGKSAATYLAELLGLT-NAEAFDLK-QACYGGTAALQLAANLVESGPWRY 130 (324)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCccHHHHHHHHcCCC-CCceeehh-hhhHHHHHHHHHHHHHHHcCCCCE
Confidence 99999999999999999999998864 5556889999999999998 89999999 699999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccCCCCcc
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTG 337 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g 337 (504)
+|||++|.++.... ..++ ..++|||||+|+||++.+.. ..+++. .++..+++..+++ +.+.-+ +...
T Consensus 131 vlvv~~e~~~~~~~-~~~~----~~~~~gdgaaA~ll~~~~~~---~~~~i~---~~~~~~~~~~~~~-~~~~~~-~~~~ 197 (324)
T cd00827 131 ALVVASDIASYLLD-EGSA----LEPTLGDGAAAMLVSRNPGI---LAAGIV---STHSTSDPGYDFS-PYPVMD-GGYP 197 (324)
T ss_pred EEEEEEHHhhhccc-CCCC----ccccccCceEEEEEecCccc---ccCCce---eeeeecccccccC-ccceec-cCCC
Confidence 99999999887432 1122 46899999999999987642 123333 3344455543320 000000 0000
Q ss_pred cccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccC-CccCcccccCEEEEcCCCH-HHHHHHHH
Q 010687 338 VSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKP-YIPDFKLAFDHFCIHAGGR-AVIDELEK 415 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~-~~p~~~~did~~~~Hq~g~-~vl~~i~~ 415 (504)
.... ... +..+...+.. .+-...+... ..++++..+++ .+. +||++|++||+|+ .+++.+++
T Consensus 198 ~~~~----~~~----~~~~~~~~~~----~~~~~~~~~~-~~~~~~~~l~~~~~~---~~i~~~~~h~~~~~~~~~~~~~ 261 (324)
T cd00827 198 KPCK----LAY----AIRLTAEPAG----RAVFEAAHKL-IAKVVRKALDRAGLS---EDIDYFVPHQPNGKKILEAVAK 261 (324)
T ss_pred cchh----hhh----hcceeecCCc----cchHHHHhHH-HHHHHHHHHHHcccc---cccceeeccCchHHHHHHHHHH
Confidence 0000 000 0000000000 0000011111 12233322222 111 6899999999999 99999999
Q ss_pred HcCCCchhhhhhhh-ccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheee
Q 010687 416 NLQLLPEHVEASRM-TLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVW 477 (504)
Q Consensus 416 ~Lgl~~e~~~~S~~-~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~ 477 (504)
.|+++++++..++. ++++||||+|+|+++.|+++++++++++||+|++++||+|++++++++
T Consensus 262 ~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~~~~~~Gd~vl~~~~G~G~~~~~~~~ 324 (324)
T cd00827 262 KLGGPPEKASQTRWILLRRVGNMYAASILLGLASLLESGKLKAGDRVLLFSYGSGFTAEAFVL 324 (324)
T ss_pred HccchHhhhccchhhHHHHhCchHHHHHHHHHHHHHhcCCCCCCCEEEEEEeccchhheeccC
Confidence 99999999976654 899999999999999999999999999999999999999999998874
No 32
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=100.00 E-value=1.7e-35 Score=309.99 Aligned_cols=307 Identities=16% Similarity=0.172 Sum_probs=220.3
Q ss_pred eEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHHH
Q 010687 100 IYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVMF 179 (504)
Q Consensus 100 v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~ 179 (504)
|+|.+++.|+|+ ++++++++.+..+. +++ |+.+..|+++|++.++++. +.+|+.
T Consensus 1 iGI~~i~~y~P~--~~v~~~ela~~~g~----~~~------~~~~g~G~~~~~~~~~~ed--------------~~~la~ 54 (379)
T TIGR01835 1 IGIDKISFFTPQ--NYLDMTALAEARGV----DPE------KFHIGIGQKKMAVPPIDED--------------IVTMAA 54 (379)
T ss_pred CCEeEEEEECCC--EEeeHHHHHHHhCC----CHH------HHHhhcCceEEeeCCCCCC--------------HHHHHH
Confidence 579999999999 99999999987552 444 6888999999998877653 689999
Q ss_pred HHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeE
Q 010687 180 GALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYA 258 (504)
Q Consensus 180 ~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~a 258 (504)
+|++++|+++ +|++||.||++| ++++..|+.+..|+++||+++++.++|+. ++|+|++.||++|.+++++++.++|
T Consensus 55 ~Aa~~aL~~a--~~~~Id~li~~t~s~~~~~~s~a~~v~~~Lgl~~~~~~~dv~-~aC~gg~~aL~~A~~~i~s~~~~~a 131 (379)
T TIGR01835 55 SAAKPILDRN--DKQKIDMVIFGTESGIDQSKAAAVYVHGLLGLQPFCRSFELK-QACYGATAALQMAKGHVALSPDRKV 131 (379)
T ss_pred HHHHHHHHhC--CHhhCCEEEEEeCCCCCCCCCHHHHHHHHhCCCCCceEEEec-cccHHHHHHHHHHHHHHHcCCCCeE
Confidence 9999999998 899999999986 56777899999999999998889999999 6999999999999999999999999
Q ss_pred EEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEE-EEeecCCCccccceeecccCCCCcc
Q 010687 259 VVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVV-RTHKGADDNAFKCVYQEQDNAGKTG 337 (504)
Q Consensus 259 LVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v-~t~~~~d~~~~~~~~~~~d~~g~~g 337 (504)
|||++|+... .. .+ . ...+|||||+|+||++++. +..+. .....+++. ++. +.+....
T Consensus 132 LVv~~D~a~~--~~-~~-~---~~~~~GdGA~A~Ll~~~~~--------i~~~~~~~~~~t~~~-~df-~~p~~~~---- 190 (379)
T TIGR01835 132 LVIASDIAKY--GL-ES-P---GEPTQGAGAVAMLVSADPK--------LLAINEDSVLYTDDI-MDF-WRPNYST---- 190 (379)
T ss_pred EEEEeehhhc--cc-CC-C---CCccccCccEEEEEecCCC--------eeEEeccceeeecCC-CCc-cCCCCCC----
Confidence 9999998432 11 11 1 2468999999999997542 11111 011112221 221 1221100
Q ss_pred cccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCCCHHH----HHHH
Q 010687 338 VSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAV----IDEL 413 (504)
Q Consensus 338 ~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~g~~v----l~~i 413 (504)
-+.+. |+. ....|+... .++++..++. .+...+|||+||+||++.++ ++.+
T Consensus 191 ------~~~v~-----------g~~------s~~~y~~~~-~~~~~~~l~~-~g~~~~did~~i~H~p~~~~~~k~~~~~ 245 (379)
T TIGR01835 191 ------TALVD-----------GQY------SNEQYLNAF-ENAWNDYAKR-TGLSLADFAAFCFHVPFTKMGLKALRHI 245 (379)
T ss_pred ------ceeEC-----------cHH------HHHHHHHHH-HHHHHHHHHH-hCCCHHHcCEEEECCCCCcHHHHHHHHH
Confidence 00000 000 000111111 1222221211 12224899999999997776 3345
Q ss_pred HHHcCCCc-hh----hhhhhhccccccccccchHHHHHHHHHHcC-CCCCCCEEEEEeechhHHhhheeeEeec
Q 010687 414 EKNLQLLP-EH----VEASRMTLHRFGNTSSSSIWYELAYTEAKG-RMRRGNRVWQIAFGSGFKCNSAVWQALR 481 (504)
Q Consensus 414 ~~~Lgl~~-e~----~~~S~~~l~r~GNtsSasi~~~L~~~~~~g-~i~~Gd~Vlli~fG~G~~~~sav~r~~~ 481 (504)
.+.+++++ ++ +++|+.+.+++|||+|+|+++.|+.+++.+ ++++||+|++++||+|+.......+..+
T Consensus 246 l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~~l~L~~~l~~~~~~~~Gd~ill~s~GsG~~ae~~~~~~~~ 319 (379)
T TIGR01835 246 LKKNYEDEDESVQNAYLESIIYNREVGNLYTGSLYLGLASLLENAFEDTTGDKIGLFSYGSGAVAEFFSGTLVA 319 (379)
T ss_pred HhhcccccHHHHHHHhhhhhhhhhhcCchHhHHHHHHHHHHHHhcccCCCCCEEEEEEecCCcceeeEEEEEcc
Confidence 56677773 33 345667899999999999999999999886 7999999999999999876666665543
No 33
>PLN02577 hydroxymethylglutaryl-CoA synthase
Probab=100.00 E-value=1.5e-33 Score=298.64 Aligned_cols=311 Identities=17% Similarity=0.258 Sum_probs=219.5
Q ss_pred CCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEec--cCCCcCCCCCCcHHHHHHH
Q 010687 96 RPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYV--PDAMHYLPPRPSMAAAREE 173 (504)
Q Consensus 96 ~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~--~~~~~~~~~~~~~~~~~~e 173 (504)
+|++|.|.++|.|+|+ ++++++++.+..+. +++ |+ ++||++|+++ ++++ +
T Consensus 1 ~~~~vgI~gig~Y~P~--~~v~n~eLa~~~g~----~~~------~~--~~GI~~r~~ava~~~E--------------d 52 (459)
T PLN02577 1 MPKNVGILAMEVYFPP--TCVQQEALEAHDGV----SKG------KY--TIGLGQDCMAFCTDVE--------------D 52 (459)
T ss_pred CCCccEEEEEEEeCCC--eEEcHHHHHHHhCC----CHH------HH--hhccceeEeccCCCCC--------------C
Confidence 4788999999999999 89999999887653 554 44 6899999874 3444 2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHH---HHcCCCCcceeEEecCCcchHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIV---NKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~---~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~l 249 (504)
+.+|+++|++++|+++|++|++||.||++| |+++..|+++..|+ ++||.+ ++.+||++ .+|+||+.||++|.++
T Consensus 53 ~~tmA~~AA~~aL~~agid~~~IdllivaTeT~~d~~ps~A~~v~~ll~~LG~~-~~~afDi~-~AC~G~~~AL~~A~~~ 130 (459)
T PLN02577 53 VISMSLTVVKSLLEKYNIDPKQIGRLEVGSETVIDKSKSIKTFLMQLFEESGNT-DIEGVDST-NACYGGTAALLNCVNW 130 (459)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEcCCCCCCCCchHHHHHHHHHHhCCC-CcEEeehh-hhhHHHHHHHHHHHHH
Confidence 789999999999999999999999999997 56788999999886 678876 89999999 5999999999999999
Q ss_pred HhcCC--CCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCc-cccce
Q 010687 250 LQVHR--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDN-AFKCV 326 (504)
Q Consensus 250 L~a~~--~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~-~~~~~ 326 (504)
++++. .++||||++|+.+... . .. ...+||||+|+||+.++. ..+.. ...++... .++.
T Consensus 131 i~sg~~~~~~aLVV~aD~a~~~~-~-~~------e~t~GdGA~A~lv~~~~~------~~l~~---~~~g~~~~~~~Df- 192 (459)
T PLN02577 131 VESSSWDGRYGLVVAADSAVYAE-G-PA------RPTGGAGAVAMLVGPNAP------IVFES---KYRGSHMAHVYDF- 192 (459)
T ss_pred HHcCCCCCCeEEEEEechhhccC-C-CC------CCCCCcceEEEEEccCCC------ceeec---ccccccCcccchh-
Confidence 99986 5999999999966421 1 12 235699999999996442 11111 11111111 1222
Q ss_pred eecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHH---HHHHHHhh--ccCCccCcccccCEEE
Q 010687 327 YQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLV---AKKFSNAK--VKPYIPDFKLAFDHFC 401 (504)
Q Consensus 327 ~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~---~~~vl~~~--~~~~~p~~~~did~~~ 401 (504)
+.|..... .....|+.+ +.+|+..+ .+++.+.. ... .....+|||++|
T Consensus 193 ~rP~~~~~--------------------~~~vdG~~s------~~~yl~~~~~~~~~~~~k~~~~~~-~g~~~~d~d~~v 245 (459)
T PLN02577 193 YKPDLASE--------------------YPVVDGKLS------QTCYLMALDSCYKRFCEKYEKLEG-KQFSISDADYFV 245 (459)
T ss_pred cccCCCCC--------------------ceEEcchHH------HHHHHHHHHHHHHHHHHHhhcccc-cCCCHHHcCEEE
Confidence 22221100 011122211 11222221 12222211 100 012358999999
Q ss_pred EcCCCHHHHHHHHHHcCCC----------------------------------------------chhhhhhhhcccccc
Q 010687 402 IHAGGRAVIDELEKNLQLL----------------------------------------------PEHVEASRMTLHRFG 435 (504)
Q Consensus 402 ~Hq~g~~vl~~i~~~Lgl~----------------------------------------------~e~~~~S~~~l~r~G 435 (504)
+||+..++...-.+.|.+. .+|++||...-++.|
T Consensus 246 fHqP~~km~~ka~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vG 325 (459)
T PLN02577 246 FHAPYNKLVQKSFARLVYNDFQRNASSVDEDAKEKLAPFAGLSSDESYQNRDLEKVSQQVAKPLYDAKVQPTTLIPKQVG 325 (459)
T ss_pred ecCCccchhHHHHHHHhhhhhhhccccccchhhhccccccccchhhccccchHHHHHHHhhHHHHHHhhccHhHHHHhcC
Confidence 9999877766654444311 267778877888999
Q ss_pred ccccchHHHHHHHHHHcCC-CCCCCEEEEEeechhHHhhheeeEeec
Q 010687 436 NTSSSSIWYELAYTEAKGR-MRRGNRVWQIAFGSGFKCNSAVWQALR 481 (504)
Q Consensus 436 NtsSasi~~~L~~~~~~g~-i~~Gd~Vlli~fG~G~~~~sav~r~~~ 481 (504)
|+.++|++..|..+++... ..+|+||.++++|||......-.+..+
T Consensus 326 N~YTaSlyl~L~SlL~~~~~~~~G~rIg~fSYGSG~~se~fs~~v~~ 372 (459)
T PLN02577 326 NMYTASLYAALASLVHNKHSELAGKRILMFSYGSGLTATMFSLRLHE 372 (459)
T ss_pred cccchHHHHHHHHHHhhccccCCCCEEEEEeecCCccceeEEEEEeC
Confidence 9999999999999997642 459999999999999877766666554
No 34
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=99.98 E-value=4e-32 Score=262.03 Aligned_cols=203 Identities=24% Similarity=0.316 Sum_probs=162.5
Q ss_pred hcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCCh--hhHHHHHHHHHHhCCCceEeccCCCc-------CCCCC
Q 010687 94 MTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDE--SSLEFQRKILERSGLGEETYVPDAMH-------YLPPR 164 (504)
Q Consensus 94 ~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~--~~~~f~~~i~~~sGi~~r~~~~~~~~-------~~~~~ 164 (504)
.+.+.+.+|+++|+..|+ ++++++++.+.+...-..+. +..+++++|++++||++|+..-+.++ .....
T Consensus 9 ~~~~g~A~Il~IgTA~P~--~~~~Q~~~~e~~~~~~~~~~~~~~~~~l~ri~~~sgI~~R~~vl~~~~~~~~p~~~~~~~ 86 (226)
T PF00195_consen 9 QRSPGPAYILSIGTAVPP--HRITQEEIAEFFFRITHSDDLPDLRRKLRRIFENSGIEKRHSVLPEEWLDEYPSFWDFAD 86 (226)
T ss_dssp HS-SSSEEEEEEEEE-SS--EEEEGCCHHHHHHHHTT-TTGHHHHHHHHHHHHHST-SEEEESS-HHHHHTSGGGHSSSS
T ss_pred ccCCCCeEEEEEEEeCCC--ceecHHHHHHHHHHHhcccchhHHHHHHHhhhhccccceeccccchhhhhcCcchhhccC
Confidence 456788999999999999 99999999987533222232 44567899999999999987643211 01112
Q ss_pred ----CcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHH
Q 010687 165 ----PSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGV 240 (504)
Q Consensus 165 ----~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l 240 (504)
.+++.+.+++.+|+.+|++++|+++|++++|||+||++|+++...|+++.+|+++|||++++..+.+++|||.||+
T Consensus 87 ps~~~R~~~~~~~a~~L~~~Aa~~AL~~~g~~~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~R~~i~~~GC~gg~ 166 (226)
T PF00195_consen 87 PSLAERNALYAEEAPPLAEEAARKALAEAGLDPSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQRTPIFGMGCAGGA 166 (226)
T ss_dssp S-HHHHHHHHHHHHHHHHHHHHHHHHHHHTS-GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSEEEEEES-GGGHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcccceEEEEecCCcCCCchhHHHHhcCCCCCCcEEEEEeccchhhHH
Confidence 2467789999999999999999999999999999999988888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCC--CcCccccccccccccEEEEEeccc
Q 010687 241 IAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGN--KKSMLIPNCLFRVGGSAVLLSNKA 298 (504)
Q Consensus 241 ~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~--dr~~l~~~~lfgDGAaA~LLs~~~ 298 (504)
.||.+|+++.+++|..+||||+.|.+|.+|..++ +++++++++||||||||+||+.+|
T Consensus 167 ~~L~~A~~~~~~~p~a~VLvv~vElcsl~~~~~~~~~~~~lv~~aLFgDGaAA~vv~~dP 226 (226)
T PF00195_consen 167 AGLRRAKDIARANPGARVLVVCVELCSLHFQAPNDDSLDNLVANALFGDGAAAVVVGADP 226 (226)
T ss_dssp HHHHHHHHHHHHSTT-EEEEEEEEEGGGTHHHCCTTSHHHHHHHHHB-EEEEEEEEESS-
T ss_pred HHHHHHHHHHhCCccceEEEEEEEeeEEEEecCCcccHHHHhHHhhhcCCceEEEEccCC
Confidence 9999999999999999999999999998776433 467889999999999999999764
No 35
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade. Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.
Probab=99.97 E-value=1.3e-30 Score=276.01 Aligned_cols=320 Identities=17% Similarity=0.208 Sum_probs=213.7
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceE--eccCCCcCCCCCCcHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEET--YVPDAMHYLPPRPSMAAAREEAEQ 176 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~~ea~~ 176 (504)
+|+|.+++.|+|+ ++++++++.+..+. +++ |+ .+||++|+ ++++++. +.+
T Consensus 1 ~vgI~~ig~y~P~--~~v~~~eLa~~~g~----~~~------k~--~~GI~~rr~av~~~~Ed--------------~~t 52 (454)
T TIGR01833 1 DVGILALEIYFPS--QYVDQAELEKYDGV----SAG------KY--TIGLGQTKMGFCTDRED--------------INS 52 (454)
T ss_pred CcEEEEEEEeCCC--eEEcHHHHHHhcCC----CHH------Hh--eechhheecccCCCCCC--------------HHH
Confidence 5899999999999 89999999887652 443 44 59999998 4555442 799
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHc---CCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKY---KLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~l---Gl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
|+.+|++++|++++++|++||+||++| |+++..|+.+.+|++.| |.+ ++.+||+. .+|+|++.||.+|.+++++
T Consensus 53 ma~~AA~~lL~~a~id~~~Id~Liv~TeS~~d~sps~a~~v~~lL~~lG~~-~~~~fDi~-~AC~G~t~AL~~A~~~i~s 130 (454)
T TIGR01833 53 LCLTVVSKLMERYNIDYNQIGRLEVGTETIIDKSKSVKTVLMQLFEESGNT-DVEGIDTT-NACYGGTAALFNAINWIES 130 (454)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEEECCCCCCCCCchHHHHHHHHHhcCCC-CceEEecc-ccchhHHHHHHHHHHHHHc
Confidence 999999999999999999999999997 67889999999999855 454 89999999 6999999999999999998
Q ss_pred CC--CCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecc
Q 010687 253 HR--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQ 330 (504)
Q Consensus 253 ~~--~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~ 330 (504)
+. .++||||++|+. . | .+.+ ...++||||+|+||++++.- -++. ++..++.....+.|+-....
T Consensus 131 ~~~~~~~aLVV~sDia-~--y--~~~~---~~~t~GaGAvAmLv~~~~~~----~~~~-~~~~~~~~~~~DF~rP~~~~- 196 (454)
T TIGR01833 131 SSWDGRYALVVAGDIA-V--Y--AKGN---ARPTGGAGAVAMLIGPNAPI----VFER-GLRGSHMQHAYDFYKPDLAS- 196 (454)
T ss_pred CCcCCCeEEEEEeccc-c--c--cCCC---eeeccccceEEEEeccCccc----eecC-ccceEEEeecccccCCCCCC-
Confidence 85 699999999993 2 2 2222 23578999999999976541 0111 00112211112222211100
Q ss_pred cCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCCCHHHH
Q 010687 331 DNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAVI 410 (504)
Q Consensus 331 d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~g~~vl 410 (504)
+.-...-.+|-+ ..-+++... +..|..... +.++..... -....+|||++|+|++..++.
T Consensus 197 -~~p~vdg~~S~~---~Yl~a~~~~--------------y~~y~~~~~-~a~~~~~~~-~~~~~~dfd~~~fH~P~~km~ 256 (454)
T TIGR01833 197 -EYPVVDGKLSIQ---CYLSALDRC--------------YKSYCKKIE-KQWGKSGGD-RKFTLNDFDYMVFHSPYCKLV 256 (454)
T ss_pred -cccccCCccCHH---HHHHHHHHH--------------HHHHHHHHH-Hhhhhhccc-cCCCHhHcCEEeccCCcccHH
Confidence 000000112211 001111110 000110000 011111000 011248999999999977665
Q ss_pred HHH-HHHc---------------------------------------------CCCchhhhhhhhccccccccccchHHH
Q 010687 411 DEL-EKNL---------------------------------------------QLLPEHVEASRMTLHRFGNTSSSSIWY 444 (504)
Q Consensus 411 ~~i-~~~L---------------------------------------------gl~~e~~~~S~~~l~r~GNtsSasi~~ 444 (504)
... ++.+ +...+|++||...-++.||+.++|++.
T Consensus 257 ~ka~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kv~ps~~~~~~vGN~YtaSlyl 336 (454)
T TIGR01833 257 QKSLARLLYNDFLRNPSSIDTALYEGLEALSTLKLEDTYFDRDLEKAFMKASKELFDKKTKPSLLVPNQVGNMYTASLYG 336 (454)
T ss_pred HHHHHHHHHhhhhhccccccchhhcccchhhccccccccchhhHHHHHHhhhhhhHHHhhcchhHHHHhcCchhhhHHHH
Confidence 543 3222 111267888877777999999999999
Q ss_pred HHHHHHHcCC--CCCCCEEEEEeechhHHhhheeeEeecc
Q 010687 445 ELAYTEAKGR--MRRGNRVWQIAFGSGFKCNSAVWQALRN 482 (504)
Q Consensus 445 ~L~~~~~~g~--i~~Gd~Vlli~fG~G~~~~sav~r~~~~ 482 (504)
.|..+++..+ ...|+||.|++||||........+..+.
T Consensus 337 ~L~Sll~~~~~~~~~g~ri~~fSYGSG~~se~fs~~v~~~ 376 (454)
T TIGR01833 337 CLASLLSSKSAQELAGKRVGMFSYGSGLAASMFSLRVSQD 376 (454)
T ss_pred HHHHHHhhCCccccCCCEEEEEeccCCcceeeEEEEEeCC
Confidence 9999997543 4579999999999998776666665543
No 36
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=99.97 E-value=1.9e-30 Score=263.88 Aligned_cols=308 Identities=18% Similarity=0.254 Sum_probs=234.2
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
.+.|++++.|.|. +++..+|+.+..+. +++ ++...+|++++.+.+.++ ++..|+
T Consensus 2 ~iGI~~~g~y~p~--~~i~~~ela~~~g~----d~~------k~~~gl~~~e~sv~~~~E--------------D~vTma 55 (377)
T COG3425 2 MIGIVGIGAYIPR--YRIKLEELARAWGV----DPE------KIKKGLGVEEKSVPPWDE--------------DAVTMA 55 (377)
T ss_pred ccccceEEEeccc--eEeeHHHHHhhcCC----ChH------HhhhccccccccCCCCch--------------hHHHHH
Confidence 5789999999999 99999999887552 444 788899999999987764 589999
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTY 257 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~ 257 (504)
++||+++|++.++||++|+.|+++| |..+..-+.+..|++.||+.+++.++|+. .+|-++..||+.|.+++.+++.++
T Consensus 56 veAA~~~l~r~~~D~~~Ig~v~vgTES~~d~~K~~at~v~~~lg~~~~~~~~d~~-~AC~agT~aL~~a~~~v~s~~~~~ 134 (377)
T COG3425 56 VEAARNALKRADIDPSKIGAVIVGSESGPDAVKPTATIVAEALGLNPSARAADVE-FACYAGTAALQAAIGWVESGMISY 134 (377)
T ss_pred HHHHHHHHhccCCCHHHCceEEEecCCCcccccchHHHHHHHhCCCCceehhhHH-HHHHHHHHHHHHHHHHHHcCCccc
Confidence 9999999999999999999999998 55667888999999999999999999999 599999999999999999999999
Q ss_pred EEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccC-CCCc
Q 010687 258 AVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDN-AGKT 336 (504)
Q Consensus 258 aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~-~g~~ 336 (504)
+|||++|+.- |...+. .....|+||+|+|++..+... ..+.... ..+++ .++ .+++++. .-..
T Consensus 135 ~LvI~sD~a~---~~~~~~----~E~t~GAGavA~lIg~n~~~~----a~~~~~~---syt~d-~~D-FwRp~~~~yp~~ 198 (377)
T COG3425 135 GLVIGADTAQ---YAPGDA----LEYTAGAGAVAFLIGKNPPIV----AEFEGTG---SYTTD-TPD-FWRPDGQPYPYV 198 (377)
T ss_pred eEEEeehhhc---cCCCcc----cCccCCCceEEEEEccCCCeE----EEecCce---EEecC-CCc-ccccCCCccccc
Confidence 9999999842 222222 236789999999999864321 1111111 11111 112 1223221 1111
Q ss_pred ccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHH---HHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHH
Q 010687 337 GVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLV---AKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDE 412 (504)
Q Consensus 337 g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~---~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~ 412 (504)
+-.++ .+ .|++.+ .++.++ ..++ .+|||++|+||++.++-..
T Consensus 199 dg~~s--~~--------------------------~Y~~~~~~a~~~~~~k~gls------~~dfdy~vfH~P~~k~~~k 244 (377)
T COG3425 199 DGRFS--EP--------------------------AYFKHVENAAKGYMEKTGLS------PDDFDYIVFHQPNGKFPKK 244 (377)
T ss_pred Cceec--HH--------------------------HHHHHHHHHHHHHHHHhCCC------hhhhCeEEecCCCCchHHH
Confidence 11111 11 111111 123332 2233 4899999999999999999
Q ss_pred HHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhheeeEeeccCC
Q 010687 413 LEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVK 484 (504)
Q Consensus 413 i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~ 484 (504)
..+.++.+.+++.++....++.||+.|+|+++.|+.+++... .+||||++.+||+|......-.+....+.
T Consensus 245 a~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~~a~-~~G~rIl~~SYGSGa~s~~fs~~v~~~~~ 315 (377)
T COG3425 245 AAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLDNAK-LPGDRILLFSYGSGAGSEAFSITVTDGIE 315 (377)
T ss_pred HHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHhhcC-CCCCEEEEEeeCCCcceeEEEEEecccHH
Confidence 999999999999999888889999999999999999998766 79999999999999766655555555443
No 37
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=99.95 E-value=9.1e-28 Score=236.67 Aligned_cols=237 Identities=18% Similarity=0.200 Sum_probs=182.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.||++++ +++..|+.+.+|++++|++ +.+++++. .+|++++.||++|.++|++
T Consensus 7 ~~~l~~~A~~~al~~ag~~~~~i~~li~~~~~~~~~~~~~a~~i~~~lg~~-~~~~~~i~-~~C~s~~~al~~A~~~i~~ 84 (254)
T cd00327 7 ASELGFEAAEQAIADAGLSKGPIVGVIVGTTGGSGEFSGAAGQLAYHLGIS-GGPAYSVN-QACATGLTALALAVQQVQN 84 (254)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCceEEEEEECCCCccccHHHHHHHHHhCCC-CCCcceec-cHhHHHHHHHHHHHHHHHC
Confidence 6789999999999999999999999999975 5666899999999999997 79999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecccC
Q 010687 253 HRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDN 332 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~d~ 332 (504)
+..+++||+++|. ++|||||+|+||++.+...++....+..+.......++..+.
T Consensus 85 g~~~~~lv~~~e~-----------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~~~~~~~~~-------- 139 (254)
T cd00327 85 GKADIVLAGGSEE-----------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAATFDGASMV-------- 139 (254)
T ss_pred CCCCEEEEEecce-----------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEEcCCCCCCC--------
Confidence 9999999999997 589999999999986542211110111122121112211100
Q ss_pred CCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHHh-hccCCccCcccccCEEEEcCCCHHHHH
Q 010687 333 AGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNA-KVKPYIPDFKLAFDHFCIHAGGRAVID 411 (504)
Q Consensus 333 ~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~-~~~~~~p~~~~did~~~~Hq~g~~vl~ 411 (504)
.....+ . .....+++++. .+. .+|+|+|++|+.+..+.+
T Consensus 140 -----~~~~~~-------~----------------------~~~~i~~~l~~ag~~------~~did~~~~h~~~~~~~~ 179 (254)
T cd00327 140 -----PAVSGE-------G----------------------LARAARKALEGAGLT------PSDIDYVEAHGTGTPIGD 179 (254)
T ss_pred -----CCCChH-------H----------------------HHHHHHHHHHHcCCC------HHHCCEEEccCCcCcccc
Confidence 000000 0 00112334432 222 389999999999999999
Q ss_pred HHHHHcCCCchhhh--hhhhccccccccccchHHHHHHHHHHcCCCC-------CCCEEEEEeechhHHhhheee
Q 010687 412 ELEKNLQLLPEHVE--ASRMTLHRFGNTSSSSIWYELAYTEAKGRMR-------RGNRVWQIAFGSGFKCNSAVW 477 (504)
Q Consensus 412 ~i~~~Lgl~~e~~~--~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~-------~Gd~Vlli~fG~G~~~~sav~ 477 (504)
.+++.+++++++.. +...+..+|||++++|.++.|.++.+..+.+ +||+++++++|.|++++++++
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~g~Gg~~~~~~l 254 (254)
T cd00327 180 AVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPTPREPRTVLLLGFGLGGTNAAVVL 254 (254)
T ss_pred HHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCCCCCcCEEEEeeEcCCCcceEEEC
Confidence 99999999887764 3457889999999999999999998876665 899999999999999988875
No 38
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=99.92 E-value=4.2e-25 Score=226.27 Aligned_cols=251 Identities=17% Similarity=0.137 Sum_probs=181.6
Q ss_pred HHHHHHHHHHHHHHhCCCC----CCCcCEEEEeecC-CCC---------------------CCchHHHHHHHcCCCCcce
Q 010687 174 AEQVMFGALDNLFANTNVK----PKDIGILVVNCSL-FNP---------------------TPSLSAMIVNKYKLRGNIR 227 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~----~~dId~LI~~~s~-~~~---------------------~Ps~a~~I~~~lGl~~~~~ 227 (504)
..+|+.+|++++|+++|++ +++||.||++++. .+. .|+.+.+|++.+|++ .+
T Consensus 11 ~~~l~~~aa~~aL~~Ag~~~~~~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~--g~ 88 (332)
T cd00825 11 VSILGFEAAERAIADAGLSREYQKNPIVGVVVGTGGGSPRFQVFGADAMRAVGPYVVTKAMFPGASGQIATPLGIH--GP 88 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCCEEEEEEeCCccHHHHhhhhccccccCcchhhcccchHHHHHHHHHhCCC--CC
Confidence 4679999999999999999 9999999988653 332 788899999999994 68
Q ss_pred eEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCC----------C--Cc--CccccccccccccEEEE
Q 010687 228 SFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFG----------N--KK--SMLIPNCLFRVGGSAVL 293 (504)
Q Consensus 228 ~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~----------~--dr--~~l~~~~lfgDGAaA~L 293 (504)
+++++ .||++++.||++|.++|++++.+++||+++|..+..+... + .+ +.....++|||||+|+|
T Consensus 89 ~~~v~-~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~gdGaaA~v 167 (332)
T cd00825 89 AYDVS-AACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMGALSTPEKASRTFDAAADGFVFGDGAGALV 167 (332)
T ss_pred ccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhccccCCCCCCCCCCCCCCCEEEEeeEEEEE
Confidence 99999 6999999999999999999999999999999876533210 0 00 11225689999999999
Q ss_pred Eecccccccc---ccceEeeEEEEeecCCCccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHH
Q 010687 294 LSNKAKDRRR---AKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQL 370 (504)
Q Consensus 294 Ls~~~~~~~~---~~~~l~~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~ 370 (504)
|++.+....+ ...++.+ .....++..... +. ... +
T Consensus 168 L~~~~~a~~~~~~~~~~i~~---~~~~~~~~~~~~------------~~--~~~-----~-------------------- 205 (332)
T cd00825 168 VEELEHALARGAHIYAEIVG---TAATIDGAGMGA------------FA--PSA-----E-------------------- 205 (332)
T ss_pred ECcHHHHHHCCCeEEEEEEE---EEEccCCCCCCC------------CC--cCH-----H--------------------
Confidence 9976542111 1122222 111222211000 00 000 0
Q ss_pred HHHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHHHHHcCCCchhh--hhhhhccccccccccchHHHHHH
Q 010687 371 LFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHV--EASRMTLHRFGNTSSSSIWYELA 447 (504)
Q Consensus 371 ~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~--~~S~~~l~r~GNtsSasi~~~L~ 447 (504)
... ...+++++ ..+. .+|||++++|+.|..+.+.+++.++++.++. .+...+..+|||++++|.++.|.
T Consensus 206 -~~~-~~i~~al~~agl~------~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~ 277 (332)
T cd00825 206 -GLA-RAAKEALAVAGLT------VWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVD 277 (332)
T ss_pred -HHH-HHHHHHHHHcCCC------HhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHH
Confidence 000 11234443 2333 3899999999999999999999888776642 12357889999999999999999
Q ss_pred HHHHcCCCC-------------------------CCCEEEEEeechhHHhhheee
Q 010687 448 YTEAKGRMR-------------------------RGNRVWQIAFGSGFKCNSAVW 477 (504)
Q Consensus 448 ~~~~~g~i~-------------------------~Gd~Vlli~fG~G~~~~sav~ 477 (504)
.+.+..+.+ +|++++++++|.|.+++++|+
T Consensus 278 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~G~Gg~~~~~vl 332 (332)
T cd00825 278 EAVLMLEHGFIPPSIHIEELDEAGLNIVTETTPRELRTALLNGFGLGGTNATLVL 332 (332)
T ss_pred HHHHHHhcCccCCCCCCCCCCcccCcccCCCCCCCCCEEEEeeecCCCeeEEEeC
Confidence 998766555 789999999999999998874
No 39
>PF02797 Chal_sti_synt_C: Chalcone and stilbene synthases, C-terminal domain; InterPro: IPR012328 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyze the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group []. This domain of chalcone synthase is reported to be structurally similar to domains in thiolase and beta-ketoacyl synthase. The differences in activity are accounted for by differences in the N-terminal domain. ; GO: 0016746 transferase activity, transferring acyl groups; PDB: 3OV2_A 3OV3_B 1Z1F_A 1Z1E_A 3ALE_C 3OIT_A 2H84_A 1TEE_D 1TED_A 2P0U_A ....
Probab=99.80 E-value=2.5e-19 Score=163.80 Aligned_cols=128 Identities=23% Similarity=0.412 Sum_probs=95.3
Q ss_pred ceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEEEEc
Q 010687 325 CVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIH 403 (504)
Q Consensus 325 ~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~H 403 (504)
.+.+.-++.| +.+.|++++|.++++.++..+ +++++ ..++ + .|+.+|++|
T Consensus 16 ~m~~~i~~~G-f~~~Ls~~vP~~i~~~i~~~~----------------------~~~L~~~g~~----~--~~~~~wavH 66 (151)
T PF02797_consen 16 AMGWDIGDTG-FHFILSKEVPDLISDNIPPFV----------------------EDLLARHGLS----D--WDILFWAVH 66 (151)
T ss_dssp SEEEEEETTE-EEEEE-TTHHHHHHHHHHHHH----------------------HHHHHGGTCC----S--GGGSEEEEE
T ss_pred ceEEEEeCCe-EEEEEhhHhHHHHHHHHHHHH----------------------HHHHhhhccc----c--cccceeeec
Confidence 3444434334 678999999998876443322 23333 2222 2 355689999
Q ss_pred CCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHH----cCCCCC---CCEEEEEeechhHHhhhee
Q 010687 404 AGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEA----KGRMRR---GNRVWQIAFGSGFKCNSAV 476 (504)
Q Consensus 404 q~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~----~g~i~~---Gd~Vlli~fG~G~~~~sav 476 (504)
+||++|++++++.|+|+++++.+|+.+|++||||||+++++.|+++.+ +|.... +++++++|||+|++.++++
T Consensus 67 PGG~~ILd~v~~~L~L~~~~l~~Sr~vLr~yGNmSSaTVlfVL~~~~~~~~~~g~~~~~~g~~~gv~~afGPG~t~E~~l 146 (151)
T PF02797_consen 67 PGGRKILDAVEEALGLSPEQLRASREVLREYGNMSSATVLFVLERMRRKSAEEGAPPPGEGGEWGVMLAFGPGLTIEGML 146 (151)
T ss_dssp -SSHHHHHHHHHHHTS-GGGGHHHHHHHHHH-B-GGGHHHHHHHHHHHHHHHTTTSBTTTTBSEEEEEEEETTTEEEEEE
T ss_pred CChHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCcchHHHHHHHHhhhhhhcccCCCCCCCeEEEEEECCcceEeeEE
Confidence 999999999999999999999999999999999999999999999987 344333 4899999999999999999
Q ss_pred eEeec
Q 010687 477 WQALR 481 (504)
Q Consensus 477 ~r~~~ 481 (504)
+|.++
T Consensus 147 Lr~~~ 151 (151)
T PF02797_consen 147 LRSVP 151 (151)
T ss_dssp EEE-B
T ss_pred EeeCC
Confidence 99864
No 40
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....
Probab=99.80 E-value=4.7e-19 Score=163.65 Aligned_cols=167 Identities=21% Similarity=0.283 Sum_probs=127.8
Q ss_pred CCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHH
Q 010687 96 RPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAE 175 (504)
Q Consensus 96 ~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 175 (504)
||++|.|.+++.|.|. .+++.+++.+.-+. +++ |+....|.++..+.++.+ ++.
T Consensus 1 ~p~~VGI~~i~~y~p~--~~v~~~~La~~~g~----d~~------K~~~glgq~~~av~~~~E--------------D~v 54 (174)
T PF01154_consen 1 RPQNVGIDAIEFYIPR--YYVDQEELAEARGV----DPG------KYTIGLGQEKMAVPPPDE--------------DIV 54 (174)
T ss_dssp --SSEEEEEEEEE-ES--EEEEHHHHHHHTTS-----TC------HHHTTT--SEEEE--TTS---------------HH
T ss_pred CCccccEeEEEEecCc--eEecHHHHHHHhCC----CHH------HhhhhcCeeEEEeCCCcc--------------cHH
Confidence 7999999999999999 89999999877553 444 566556666667777654 489
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEee-cCCCCCCchHHHHHHHcCC--CCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNC-SLFNPTPSLSAMIVNKYKL--RGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~-s~~~~~Ps~a~~I~~~lGl--~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
.|+..|++++|++.+++|++|+.|+++| |.....-+.+.+|++.||+ ..++..+|+. ++|.||..||+.|.+++++
T Consensus 55 TmA~nAa~~ll~~~~id~~~Ig~l~vgTES~vD~sKs~~t~v~~ll~~s~~~~~~~~e~k-~ACygGTaAL~~a~~~v~s 133 (174)
T PF01154_consen 55 TMAANAAKPLLDRYNIDPDDIGRLIVGTESGVDKSKSISTYVHQLLGLSGNPDCRGVEMK-QACYGGTAALQNAVNWVAS 133 (174)
T ss_dssp HHHHHHHHTTHHHHT-HHHHEEEEEEE-SS-SBSSS-HHHHHHHHTTTTT-SSSEEEEEE-SGGGHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHcCCCHHHccEEEEeccccccccccHHHHHHHHhCcCCCCceeeeehh-hhhHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999998 4555677899999999999 4578999999 5999999999999999999
Q ss_pred CC--CCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEecc
Q 010687 253 HR--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNK 297 (504)
Q Consensus 253 ~~--~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~ 297 (504)
++ .+++|||++|+. + |...+ +...-|-||.|+|++++
T Consensus 134 ~~~~g~~aLVVasDiA-~--y~~g~-----~e~TqGAGAVAmLi~~n 172 (174)
T PF01154_consen 134 SPWDGRKALVVASDIA-R--YDLGS-----AEPTQGAGAVAMLIGPN 172 (174)
T ss_dssp TTSTTEEEEEEEEEEE-----STTT-----TGGG-EEEEEEEEEECS
T ss_pred CCCCCCeEEEEecccc-c--cCCCC-----ccccccceeEEEEecCC
Confidence 74 689999999984 3 32221 23577999999999975
No 41
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=99.79 E-value=1.2e-19 Score=151.77 Aligned_cols=83 Identities=35% Similarity=0.576 Sum_probs=75.0
Q ss_pred ccccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhh
Q 010687 394 KLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCN 473 (504)
Q Consensus 394 ~~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~ 473 (504)
.+|||+|++||.+.++++.+.+.+|++++++ ..++++|||++|||+|++|+++.++|++++||+|+++++|+|++|+
T Consensus 8 ~~did~~i~hq~~~~~~~~~~~~lgi~~~~~---~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~~G~G~~~~ 84 (90)
T PF08541_consen 8 PDDIDHFIPHQASKKILDSIAKRLGIPPERF---PDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVGFGAGFSWG 84 (90)
T ss_dssp GGGESEEEE-SSSHHHHHHHHHHHTS-GGGB---E-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEEEETTTEEE
T ss_pred HHHCCEEEeCCCCHHHHHHHHHHcCCcHHHH---HHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEEEEhhheeE
Confidence 3899999999999999999999999999998 6899999999999999999999999999999999999999999999
Q ss_pred heeeEe
Q 010687 474 SAVWQA 479 (504)
Q Consensus 474 sav~r~ 479 (504)
+++|||
T Consensus 85 ~~~~~~ 90 (90)
T PF08541_consen 85 AAVLRW 90 (90)
T ss_dssp EEEEE-
T ss_pred EEEEEC
Confidence 999997
No 42
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=99.69 E-value=6.1e-16 Score=160.60 Aligned_cols=310 Identities=12% Similarity=0.049 Sum_probs=191.4
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHH-----HHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQ-----RKILERSGLGEETYVPDAMHYLPPRPSMAAAREE 173 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~-----~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~e 173 (504)
+|+|++.|+.-|=. .+.++....++. +--+.+...|+ ++|..++|+.+|++.. .+.
T Consensus 4 ~v~I~~~g~vs~lG---~~~~~~~aa~ra-gi~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---------------~~r 64 (348)
T PRK06147 4 ALAIVGSGMVTAVG---LDAPSSCAAIRA-RLDNFQETRFIDPPGGEWLIGAPVPLPPPWRG---------------PER 64 (348)
T ss_pred ceEEEecceeecCc---CCHHHHHHHHHc-ccccccccccccCCCCCceEeecCcCCcccCc---------------hHH
Confidence 69999999998873 333433333321 10000100000 1344555555544421 123
Q ss_pred HHHHHHHHHHHHHHhCC-CCCCCcCEEEEeec------CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTN-VKPKDIGILVVNCS------LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLA 246 (504)
Q Consensus 174 a~~la~~Aa~~aL~~ag-i~~~dId~LI~~~s------~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA 246 (504)
..+|+..|++++|++++ +++++||++|+.++ ++...|.++..+++++|+.....+++++ .||++++.||..|
T Consensus 65 ~~~La~~Al~~aL~~a~~~~~~~i~lil~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~~~~~~~i~-~~casg~~Al~~A 143 (348)
T PRK06147 65 LAEMAAPAIAEALEGLPALDASEAPLLLCVAEEERPGRPPDLEERLLRELEARLGLRLEPGSAVIA-RGRVSGAVALAQA 143 (348)
T ss_pred HHHHHHHHHHHHHHhcccccccCCcEEEEeCchhcCCCCcchHHHHHHHHHHHhCCCCCCCccccc-ccchHHHHHHHHH
Confidence 67899999999999999 79999999887643 2233456678899999996557789999 5999999999999
Q ss_pred HHHHhcCCCCeEEEEEeccCcCC----CcC------CCCcCccccccccccccEEEEEeccccccccccceEeeEEEEee
Q 010687 247 KDMLQVHRNTYAVVVSTENITQN----WYF------GNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHK 316 (504)
Q Consensus 247 ~~lL~a~~~~~aLVVs~E~~S~~----~~~------~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~ 316 (504)
.++|+.+..+.+||+++|.++.. ++. .+++. ...+|||||+++||++.+...++ +-++.. ...
T Consensus 144 ~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~~~~~---~G~v~GEGA~a~vLe~~~~A~~r-ga~i~a---~g~ 216 (348)
T PRK06147 144 RRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLTSQNS---NGFIPGEAAAAVLLGRPAGGEAP-GLPLLG---LGL 216 (348)
T ss_pred HHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCCCCCC---CceeeeceEEEEEEccHhhhhcC-CCceEE---EEE
Confidence 99999999999999999987651 111 12222 35799999999999976542211 122222 111
Q ss_pred cCCCccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCccc
Q 010687 317 GADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKL 395 (504)
Q Consensus 317 ~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~ 395 (504)
+.+...+. ... +.+. + + +.+ . ...++.++ ..+. .+
T Consensus 217 ~~~~~~~~---~~~------~~p~--~-----g------------------~gl---~-~ai~~AL~~agl~------~~ 252 (348)
T PRK06147 217 GREPAPVG---ESE------DLPL--R-----G------------------DGL---T-QAIRAALAEAGCG------LE 252 (348)
T ss_pred eecCCCcc---cCC------CCCC--C-----h------------------HHH---H-HHHHHHHHHcCCC------HH
Confidence 12211110 000 0000 0 0 000 0 01123333 2333 38
Q ss_pred ccCEEEEcCCCHHHHHHH-----HHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHc--CCCCCCCEEEEEeech
Q 010687 396 AFDHFCIHAGGRAVIDEL-----EKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAK--GRMRRGNRVWQIAFGS 468 (504)
Q Consensus 396 did~~~~Hq~g~~vl~~i-----~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~--g~i~~Gd~Vlli~fG~ 468 (504)
|||+++.|..|...-+.. .+.++-..+... -..+-..+||+++|+-.+++...... ++.-+|+++++++..-
T Consensus 253 dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~-~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g~~~L~~s~~d 331 (348)
T PRK06147 253 DMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFD-LWHPAECIGEIGAAIGPALLGVALAASRKGYGPGPNVLCHLSDD 331 (348)
T ss_pred HCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCc-eecchHhhcchHHHHHHHHHHHHHHHHHcCcCCCCcEEEEecCC
Confidence 999999999877664332 344543222211 13456679999999999998875432 3455799999999887
Q ss_pred hHHhhheeeEee
Q 010687 469 GFKCNSAVWQAL 480 (504)
Q Consensus 469 G~~~~sav~r~~ 480 (504)
.-..++++++..
T Consensus 332 ~g~r~a~~l~~~ 343 (348)
T PRK06147 332 DGARAALVLEYR 343 (348)
T ss_pred CCceEEEEEecc
Confidence 667788988854
No 43
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=99.69 E-value=2.6e-15 Score=151.15 Aligned_cols=116 Identities=14% Similarity=0.169 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
..+|+.+|++++|+++|++++|||.+|+++.++. +..+..++++||+ +.|+++ .+|+++..||.+|..++++|
T Consensus 50 e~eLa~eAa~~ALekAGL~~~DID~IIvGdl~~Q--~~~As~vA~~LGI----P~fdV~-~ACSTf~~AL~lAa~lI~SG 122 (327)
T TIGR02845 50 ERKLMEDAVNLALKKANLKKDDVDFFLAGDLLNQ--IITANFVARDLGI----PFLGLY-GACSTSMETLALGAMLVDGG 122 (327)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeCCCCc--ccHHHHHHHHhCC----CEEEEe-ccCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999999999998875443 4568899999997 359999 59999999999999999999
Q ss_pred CCCeEEEEEeccCcC---C--Cc-CC--CCcCccccccccccccEEEEEecccc
Q 010687 254 RNTYAVVVSTENITQ---N--WY-FG--NKKSMLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~---~--~~-~~--~dr~~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
..++||||++|..|. . +. ++ ++|. +..+|+|||+|+||++.+.
T Consensus 123 ~ad~VLVV~Ssh~S~AErqfr~p~eyg~q~~~---ta~~tgdGAGA~vl~~~~~ 173 (327)
T TIGR02845 123 FADRVLAATSSHYATAERQFRYPTEYGVQKPP---TAQWTVTGAGAVLLASTGG 173 (327)
T ss_pred CCCEEEEEEecccchhhhhcccccccccCCCC---eeeEEEcccEEEEEeecCC
Confidence 999999999998872 1 11 22 3454 6789999999999998754
No 44
>KOG1393 consensus Hydroxymethylglutaryl-CoA synthase [Lipid transport and metabolism]
Probab=99.66 E-value=4.7e-15 Score=149.08 Aligned_cols=324 Identities=19% Similarity=0.282 Sum_probs=209.8
Q ss_pred CCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHH
Q 010687 96 RPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAE 175 (504)
Q Consensus 96 ~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 175 (504)
+|.+|.|.++-+|+|. .-|+++++..+-+. +.. |+ ..|+++....-.+ -||+..
T Consensus 8 ~p~dvGI~aieiyfP~--~yV~Q~elEk~d~v----s~g------Ky--tIGLGq~~Mgfcs------------drEDi~ 61 (462)
T KOG1393|consen 8 WPKDVGIIAIEIYFPS--QYVDQEELEKFDGV----SAG------KY--TIGLGQTQMGFCS------------DREDII 61 (462)
T ss_pred CccccceeEEEEEcCc--cccChhhHhhcCCc----ccc------ce--EeccCcceecccC------------chhhhh
Confidence 5779999999999999 78999988765432 221 22 3566665432111 135577
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcC--CCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYK--LRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lG--l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
.|...+.++++++-+++++.|+-|-|.|- .-.-.-|.-..+.+.++ -..|+.-+|..+ +|.||..||--|-+++.+
T Consensus 62 Sl~ltvvs~Lmery~i~~~~IGRLEVGTETiiDKSKSVKt~LMqLF~~sgNtdIEGiDttn-ACYGGtaALfnavnWiES 140 (462)
T KOG1393|consen 62 SLSLTVVSRLMERYNIDPDSIGRLEVGTETIIDKSKSVKTVLMQLFEESGNTDIEGIDTTN-ACYGGTAALFNAVNWIES 140 (462)
T ss_pred hhhHHHHHHHHHHhCCChhhcceEEecceeccccchHHHHHHHHHhhhcCCCccccccccc-cccccHHHHHHHhhhhhh
Confidence 89999999999999999999999999974 33446677788888887 556889999994 999999999999999998
Q ss_pred CC--CCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceEeeEEEEeecCCCccccceeecc
Q 010687 253 HR--NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQ 330 (504)
Q Consensus 253 ~~--~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t~~~~d~~~~~~~~~~~ 330 (504)
.. +++||||++|+.- +-.|+-| +.-|-||.|+|+++...-. |+- ++..+|+. ..|+.. -|
T Consensus 141 ssWDGr~aivV~gDIAv--Y~~G~aR------pTGGAgAVAmLIgPnApi~----fer-glr~thM~---hayDFy-KP- 202 (462)
T KOG1393|consen 141 SSWDGRYAIVVCGDIAV--YAKGNAR------PTGGAGAVAMLIGPNAPII----FER-GLRATHMQ---HAYDFY-KP- 202 (462)
T ss_pred cccCCceeEEEEeeEEE--ecCCCCC------CCCCcceEEEEEcCCCceE----ecc-cchhhhhh---hhhhcc-CC-
Confidence 74 7999999999841 2234434 4569999999999865421 110 11122321 123321 11
Q ss_pred cCCCCcccccchhHHHHHHHH-HhhhhhhcCCCccchhhHHHHHHHHHHHHHHHhhccCCccCcccccCEEEEcCCCHHH
Q 010687 331 DNAGKTGVSLSKDLMAIAGMA-LKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAV 409 (504)
Q Consensus 331 d~~g~~g~~ls~dl~~v~~~~-lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~~~~~~~~p~~~~did~~~~Hq~g~~v 409 (504)
| +..+-|-|.|.- +..... -+...-+...+++-+...+. -++-.++||++++|.+--++
T Consensus 203 d--------l~SEyPvVDGklSi~cYl~-----------Ald~cY~~~~kK~~~~~~~~-~~~~l~~fdy~ifHsP~cKl 262 (462)
T KOG1393|consen 203 D--------LLSEYPVVDGKLSIQCYLS-----------ALDRCYTVYRKKIAAQWQKS-GSDNLNSFDYIIFHSPYCKL 262 (462)
T ss_pred C--------CCCcCceecCeehHHHHHH-----------HHHHHHHHHHHHHHHHhccc-cCcccccCCeEEEeCchhhh
Confidence 1 112222221110 000000 00000011112222221111 11224689999999987766
Q ss_pred HHH-HHH-----------------------------------------HcCCCchhhhhhhhccccccccccchHHHHHH
Q 010687 410 IDE-LEK-----------------------------------------NLQLLPEHVEASRMTLHRFGNTSSSSIWYELA 447 (504)
Q Consensus 410 l~~-i~~-----------------------------------------~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~ 447 (504)
.+. +++ ...+-.+|+.+|.-.-.+.||+.++|+...|+
T Consensus 263 vqKs~arl~ynDf~~~~~~~~~~~~~~~~~~l~~s~~dr~~ek~~~~~s~~~~~~Kt~~sl~~~~~~GNmYTaSly~~l~ 342 (462)
T KOG1393|consen 263 VQKSLARLLYNDFLLNPSQLPESAGLESTLKLDESYTDRDLEKAFIKISKPIFKKKTKPSLLAPRRNGNMYTASLYASLA 342 (462)
T ss_pred HHHHHHHhhhhhhhhccccccccccccccccccccccchHHHHHHHHHhHHHHHhhccceeEeeccCCccccHHHHHHHH
Confidence 544 111 12233346666665666899999999999999
Q ss_pred HHHHcC--CCCCCCEEEEEeechhHHhhheeeEeeccCC
Q 010687 448 YTEAKG--RMRRGNRVWQIAFGSGFKCNSAVWQALRNVK 484 (504)
Q Consensus 448 ~~~~~g--~i~~Gd~Vlli~fG~G~~~~sav~r~~~~~~ 484 (504)
.+++.. .--.|.||.+.++|+|....-.-+|...+..
T Consensus 343 sll~~~~~d~l~Gkrig~FSYGSGlAAs~fs~~v~~da~ 381 (462)
T KOG1393|consen 343 SLLSAVPADELAGKRIGMFSYGSGLAASMFSLRVTQDAT 381 (462)
T ss_pred HHHhccchhhhhccEEEEEeecCcchhheEEEEecCCCC
Confidence 998865 3347999999999999987777777776544
No 45
>PRK08304 stage V sporulation protein AD; Validated
Probab=99.57 E-value=2.2e-13 Score=137.73 Aligned_cols=117 Identities=18% Similarity=0.265 Sum_probs=98.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
..+|+.+|++++|+++|++++|||.+|+++...+ +..+..+++.||+ +++++.+ +|+++..||.+|..++++|
T Consensus 56 eseLa~eAa~~ALekAGI~~~DID~lI~Gdll~Q--~~sAs~vA~~LGI----Pa~dV~g-ACST~~~AL~lAa~lI~SG 128 (337)
T PRK08304 56 ERKMMEDAIQQALQKANLKKSDIDYLLAGDLLNQ--IISANFAARELGI----PFLGLYG-ACSTMMESLALGSMLIDGG 128 (337)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEECCCCC--cchHHHHHHHhCC----cEEEEec-cCHHHHHHHHHHHHHHhcC
Confidence 4689999999999999999999999998865433 4567899999986 5899995 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC---CCcC----CCCcCccccccccccccEEEEEecccc
Q 010687 254 RNTYAVVVSTENITQ---NWYF----GNKKSMLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~---~~~~----~~dr~~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
..++||||++|..+. .|.. +..|.. +...+++||+|+||++...
T Consensus 129 ~ad~VLVV~Ssh~s~aerqfr~P~eyg~qrp~--taqwtvtGAGA~i~~~~~~ 179 (337)
T PRK08304 129 FADRVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAVLLSREGS 179 (337)
T ss_pred CCCEEEEEEcchhhhhhhhccCchhccccCCC--cceEEeeccEEEEEecCCC
Confidence 999999999999885 2322 233442 6789999999999998654
No 46
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=99.51 E-value=1.7e-12 Score=137.00 Aligned_cols=183 Identities=16% Similarity=0.259 Sum_probs=118.3
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcC-CCChhhHHHHHHHHHHhCCCceE--eccCCC--cCCCCCCcHHHH--
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTG-DFDESSLEFQRKILERSGLGEET--YVPDAM--HYLPPRPSMAAA-- 170 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~--~~~~~~~~~~~~-- 170 (504)
++|+|+|+|+..|.. .+.+++.+.+..-. .+.+-. +| +..+...+. ..+... ...++ ++.
T Consensus 1 ~~i~I~G~g~~~p~g---~~~~~~~~~l~~g~~~~~~~~-~~-----~~~~~~~~~~~~i~~~~~~~~~~~----~~~~~ 67 (406)
T cd00834 1 RRVVITGLGAVTPLG---NGVEEFWEALLAGRSGIRPIT-RF-----DASGFPSRIAGEVPDFDPEDYLDR----KELRR 67 (406)
T ss_pred CcEEEECcceeCCCc---CCHHHHHHHHHcCCCeeEECC-cc-----cccCCCccEEEEcCCCChhhcCCH----HHhcc
Confidence 379999999999983 57788887654210 011000 00 001111111 111110 01111 111
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecC-C--------------------------CCCCchHHHHHHH
Q 010687 171 REEAEQVMFGALDNLFANTNVKPKDIGI----LVVNCSL-F--------------------------NPTPSLSAMIVNK 219 (504)
Q Consensus 171 ~~ea~~la~~Aa~~aL~~agi~~~dId~----LI~~~s~-~--------------------------~~~Ps~a~~I~~~ 219 (504)
.....+|+..|++++|+++|++++++|. +++.++. . ...+..+.+|+..
T Consensus 68 ~~~~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~ 147 (406)
T cd00834 68 MDRFAQFALAAAEEALADAGLDPEELDPERIGVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIR 147 (406)
T ss_pred CCHHHHHHHHHHHHHHHHcCCCcccCCccceEEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHH
Confidence 1247789999999999999999877664 4444322 1 1235578899999
Q ss_pred cCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------------------CcCCCCcC
Q 010687 220 YKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN----------------------WYFGNKKS 277 (504)
Q Consensus 220 lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~----------------------~~~~~dr~ 277 (504)
||++ ..++.+. .+|++++.||..|.++|++|..++|||+++|..+.. ......+.
T Consensus 148 lgl~--g~~~~v~-~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~~~l~~~~~~p~~~~~pf~~~~ 224 (406)
T cd00834 148 LGLR--GPNYTVS-TACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAALRALSTRNDDPEKASRPFDKDR 224 (406)
T ss_pred hCCC--Ccccccc-hHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhcCCcCCCCCCCccCCCCCCCCC
Confidence 9996 4788999 699999999999999999999999999999987610 10011111
Q ss_pred ccccccccccccEEEEEecccc
Q 010687 278 MLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 278 ~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
...++||||+|+||++.+.
T Consensus 225 ---~g~~~geGA~a~vL~~~~~ 243 (406)
T cd00834 225 ---DGFVLGEGAGVLVLESLEH 243 (406)
T ss_pred ---CCEeeeccEEEEEEecHHH
Confidence 2468999999999997654
No 47
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=99.51 E-value=8.5e-13 Score=139.00 Aligned_cols=94 Identities=12% Similarity=0.204 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+|++++ ++...|..+..+++.+|+++++++++++ ++|++++.+|.+|.+++++
T Consensus 22 ~~~La~~A~~~AL~dAgl~~~dID~vi~~~~~~~~~~~~~a~~v~~~lGl~~~~~~~~v~-~~c~s~~~al~~A~~~I~s 100 (386)
T cd00751 22 ADDLGAAVIKALLERAGLDPEEVDDVIMGNVLQAGEGQNPARQAALLAGLPESVPATTVN-RVCGSGLQAVALAAQSIAA 100 (386)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCchhhhc-cccHHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998754 4555778888899999998558899999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..++|||+++|.+|.
T Consensus 101 G~~~~vLv~g~e~~s~ 116 (386)
T cd00751 101 GEADVVVAGGVESMSR 116 (386)
T ss_pred CCCCeEEEeeeecccc
Confidence 9999999999998653
No 48
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=99.43 E-value=2.9e-11 Score=128.59 Aligned_cols=121 Identities=14% Similarity=0.158 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CCCC-------------------CCchHHHHHHHcCCCCcceeE
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIG----ILVVNCS-LFNP-------------------TPSLSAMIVNKYKLRGNIRSF 229 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId----~LI~~~s-~~~~-------------------~Ps~a~~I~~~lGl~~~~~~~ 229 (504)
...|+.+|++++|+++|+++++|| .++++++ .++. .+..+..|+..+|++ ..++
T Consensus 87 ~~~l~~~aa~~Al~dAGl~~~~id~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~lgl~--g~~~ 164 (424)
T smart00825 87 QQRLLLEVAWEALEDAGIDPESLRGSRTGVFVGAMSSDYAELLARDPEDIEGYAATGTARSFIANRISYFFDLR--GPSV 164 (424)
T ss_pred HHHHHHHHHHHHHHHcCCChhHcCCCCCEEEEEEcHHHHHHHHhhCccccchhhhccchhHHHHHHHHHHhCCC--CCcc
Confidence 567899999999999999999998 6777653 2221 345677899999997 3789
Q ss_pred EecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------Cc------CCCCcCccccccccccccEEEE
Q 010687 230 NLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN----------WY------FGNKKSMLIPNCLFRVGGSAVL 293 (504)
Q Consensus 230 dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~----------~~------~~~dr~~l~~~~lfgDGAaA~L 293 (504)
.++ .+|++++.||..|.++|++|..+.+||+++|..... +. .+-|.. -...++||||+|+|
T Consensus 165 ~v~-~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaalV 241 (424)
T smart00825 165 TVD-TACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRAGMLSPDGRCKTFDAD--ADGYVRGEGVGVVV 241 (424)
T ss_pred ccc-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhcCCCCCCCCCCCCCCC--CCcccccceEEEEE
Confidence 999 599999999999999999999999999999974320 10 111111 13568899999999
Q ss_pred Eecccc
Q 010687 294 LSNKAK 299 (504)
Q Consensus 294 Ls~~~~ 299 (504)
|++.+.
T Consensus 242 Le~~e~ 247 (424)
T smart00825 242 LKRLSD 247 (424)
T ss_pred EccHHH
Confidence 997543
No 49
>PRK09051 beta-ketothiolase; Provisional
Probab=99.43 E-value=1.4e-11 Score=130.11 Aligned_cols=94 Identities=18% Similarity=0.242 Sum_probs=82.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-CchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPT-PSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~-Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++|+|||.+|++|+ ++... +..+..+...+|+++++++++++ .+|++|+.|+.+|.++++
T Consensus 27 ~~eL~~~A~~~AL~~agi~~~dID~vi~g~~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (394)
T PRK09051 27 PTDLGATVVREALARAGVDPDQVGHVVFGHVIPTEPRDMYLSRVAAINAGVPQETPAFNVN-RLCGSGLQAIVSAAQAIL 105 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEeeeccccCCCccHHHHHHHHcCCCCCCceEEec-ccchHHHHHHHHHHHHHH
Confidence 6889999999999999999999999999864 44433 34556666778997678999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+++||+++|.+|.
T Consensus 106 sG~~d~vLvvG~E~mS~ 122 (394)
T PRK09051 106 LGDADVAIGGGAESMSR 122 (394)
T ss_pred cCCCCEEEEEeehhccc
Confidence 99999999999998874
No 50
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=99.42 E-value=1.7e-11 Score=129.49 Aligned_cols=94 Identities=15% Similarity=0.233 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++|+|||.+|++|+ +....|..+..++.++|++..+++++++ .+|++|+.++.+|.+++++
T Consensus 26 ~~~La~~A~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~a~~va~~lGl~~~~p~~~V~-~~Casg~~ai~~A~~~I~s 104 (393)
T PRK05656 26 AVELGAAVIRRLLEQTGLDPAQVDEVILGQVLTAGAGQNPARQAAIKAGLPHSVPAMTLN-KVCGSGLKALHLAAQAIRC 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCCCCCcHHHHHHHHcCCCCCcceEEec-ccchhHHHHHHHHHHHHHc
Confidence 6889999999999999999999999999875 3334566778899999998558999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+++||+++|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (393)
T PRK05656 105 GDAEVIIAGGQENMSL 120 (393)
T ss_pred CCCCEEEEEEEhhhcc
Confidence 9999999999997764
No 51
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways. The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....
Probab=99.42 E-value=2.7e-13 Score=111.02 Aligned_cols=79 Identities=22% Similarity=0.427 Sum_probs=60.6
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEeccccccccccceE
Q 010687 229 FNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKL 308 (504)
Q Consensus 229 ~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l 308 (504)
||++ ++|++++.||++|.++++++..++||||++|+.+. +.++.++. +..+|||||+|+||+++++. ++++
T Consensus 1 fDi~-~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~-~~~~~~~~---~~~~~gDgAaA~vl~~~~~~----~~~i 71 (80)
T PF08545_consen 1 FDIN-QACAGFLYALDVAAALIASGRAKNALVVGGDRLSR-IVDRTDRQ---TAFIFGDGAAAVVLSRDEEG----GFGI 71 (80)
T ss_dssp EEEE--GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGG-GSHTTHHH---HHTTB-EEEEEEEEEEESSS----SCEE
T ss_pred Cccc-ccchHHHHHHHHHHHHHhhccCCEEEEEeeccccc-cccccccC---cceeecchheEEEEEecCCC----CCeE
Confidence 7999 69999999999999999999999999999999988 55545554 45799999999999997432 3554
Q ss_pred eeEEEEeecCC
Q 010687 309 VHVVRTHKGAD 319 (504)
Q Consensus 309 ~~~v~t~~~~d 319 (504)
+ .++..+|
T Consensus 72 l---~~~~~td 79 (80)
T PF08545_consen 72 L---DSHLRTD 79 (80)
T ss_dssp E---EEEEEE-
T ss_pred E---EEEEEcC
Confidence 4 3444454
No 52
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=99.41 E-value=7.8e-12 Score=131.74 Aligned_cols=94 Identities=14% Similarity=0.248 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+|+++. ++...|..+..++.++|++.++++++++ .+|++++.++.+|.+++++
T Consensus 21 ~~~La~~A~~~Al~dAgl~~~dID~vv~g~~~~~~~~~~~a~~va~~lGl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 99 (386)
T TIGR01930 21 AEDLGAAVIKELLERNPLDPELIDDVIFGNVLQAGEQQNIARQAALLAGLPESVPAYTVN-RQCASGLQAVILAAQLIRA 99 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCceeeeec-chhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999998764 4444577788899999998568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+++||+++|.+|.
T Consensus 100 G~~~~vLv~g~e~~s~ 115 (386)
T TIGR01930 100 GEADVVVAGGVESMSR 115 (386)
T ss_pred CCCCEEEEEEehhhcc
Confidence 9999999999998654
No 53
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=99.39 E-value=4e-11 Score=126.33 Aligned_cols=92 Identities=14% Similarity=0.062 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC--CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNP--TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~--~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++++|||.+|++++++.. .+..+..++++||++ ..++++++ .+|+++..++..|.++++
T Consensus 24 ~~eL~~eAa~~Al~dAgl~~~dID~iv~~~~~~~~~~~~~~~~~va~~LGl~-~~~~~~v~-~~casg~~al~~A~~~I~ 101 (386)
T PRK08313 24 MAGLVREAIDRALADAGLTWDDIDAVVVGKAPDFFEGVMMPELFLADALGAT-GKPLIRVH-TAGSVGGSTAVVAASLVQ 101 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccccccccccCchHHHHHhcCCC-CCceEEEe-ccCHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999987654332 112236899999997 67899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 010687 252 VHRNTYAVVVSTENIT 267 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S 267 (504)
+|..++||||++|..+
T Consensus 102 sG~~~~vLVvg~e~~s 117 (386)
T PRK08313 102 SGVYRRVLAVAWEKQS 117 (386)
T ss_pred CCCCCEEEEEEEEEcc
Confidence 9999999999999764
No 54
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=99.37 E-value=5.2e-11 Score=125.91 Aligned_cols=94 Identities=18% Similarity=0.258 Sum_probs=80.9
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCEEEEeec-CCCCCCchHHHH-HHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANT-NVKPKDIGILVVNCS-LFNPTPSLSAMI-VNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~a-gi~~~dId~LI~~~s-~~~~~Ps~a~~I-~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
..+|+.+|++++|+++ |++++|||.+|++++ ++...|...+++ ...+|++..+++++++ .+|++|+.|+..|.+++
T Consensus 31 ~~eLa~~A~~~AL~~a~gl~~~dID~vi~g~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~aCaSg~~Al~~A~~~I 109 (399)
T PRK09052 31 PDDLLAHVLRSAVAQVPGLDPKLIEDAIVGCAMPEAEQGLNVARIGALLAGLPNSVGGVTVN-RFCASGLQAVAMAADRI 109 (399)
T ss_pred HHHHHHHHHHHHHHhccCcCHHHCCEEEEEecCCCCCCCchHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHH
Confidence 6899999999999997 999999999999854 455555555665 4555997458999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+.+||+++|.+|.
T Consensus 110 ~sG~~d~vLv~G~E~mS~ 127 (399)
T PRK09052 110 RVGEADVMIAAGVESMSM 127 (399)
T ss_pred HCCCCCEEEEEEEecccc
Confidence 999999999999998864
No 55
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=99.36 E-value=7.5e-11 Score=123.52 Aligned_cols=93 Identities=16% Similarity=0.154 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+++.++ +....|..+..+++++|++ ++.+++++ .+|++++.++..|.+++++
T Consensus 16 ~~eL~~~A~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~~c~sg~~al~~Aa~~I~s 93 (375)
T cd00829 16 PLELAAEAARAALDDAGLEPADIDAVVVGNAAGGRFQSFPGALIAEYLGLL-GKPATRVE-AAGASGSAAVRAAAAAIAS 93 (375)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecccccccccchHHHHHHHcCCC-CcceeeEe-CccHHHHHHHHHHHHHHHh
Confidence 6899999999999999999999999998764 4433577789999999997 78999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||+++|.++.
T Consensus 94 G~~~~vlv~g~e~~s~ 109 (375)
T cd00829 94 GLADVVLVVGAEKMSD 109 (375)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 56
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=99.35 E-value=1e-10 Score=123.31 Aligned_cols=92 Identities=16% Similarity=0.153 Sum_probs=81.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC--CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNP--TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~--~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
..+|+.+|++++|+++|++++|||.+|++++ ++.. .|..+.+++..+|++ ..++++++ ++|++++.+|..|.+++
T Consensus 22 ~~eLa~~a~~~Al~dagl~~~~Id~vi~g~~~~~~~~~~~~~a~~va~~lGl~-~~~~~~v~-~aCasg~~ai~~A~~~I 99 (389)
T PRK06064 22 LRDLAVEAGLEALEDAGIDGKDIDAMYVGNMSAGLFVSQEHIAALIADYAGLA-PIPATRVE-AACASGGAALRQAYLAV 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccccccHHHHHHHHcCCC-CCCeeEEe-CCcHHHHHHHHHHHHHH
Confidence 5789999999999999999999999998754 3332 467788999999997 68899999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCc
Q 010687 251 QVHRNTYAVVVSTENIT 267 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S 267 (504)
++|..+++||+++|.+|
T Consensus 100 ~sG~~~~vLv~G~e~~s 116 (389)
T PRK06064 100 ASGEADVVLAAGVEKMT 116 (389)
T ss_pred HCCCCCEEEEEEEEecc
Confidence 99999999999999765
No 57
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=99.33 E-value=2.6e-10 Score=120.12 Aligned_cols=93 Identities=14% Similarity=0.218 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+|++++. ....+..+..++..+|++ +..+++++ ++|++++.+|.+|..++++
T Consensus 21 ~~eLa~~A~~~AL~dAgi~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~-~~~~~~v~-~~casg~~al~~A~~~I~s 98 (385)
T PRK12578 21 VQELAWESIKEALNDAGVSQTDIELVVVGSTAYRGIELYPAPIVAEYSGLT-GKVPLRVE-AMCATGLAASLTAYTAVAS 98 (385)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccccccCChHHHHHHHhCCC-CCCeeEEe-ccCHHHHHHHHHHHHHHHC
Confidence 67899999999999999999999999988643 222233468899999998 46789999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+++|||++|.+|.
T Consensus 99 G~~~~vLvvg~e~~s~ 114 (385)
T PRK12578 99 GLVDMAIAVGVDKMTE 114 (385)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998653
No 58
>PRK06059 lipid-transfer protein; Provisional
Probab=99.32 E-value=1.8e-10 Score=122.03 Aligned_cols=93 Identities=14% Similarity=0.094 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-C-CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-L-FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++++|||.||++++ + .+..+..+..+++++|++ ++++++++ .+|++++.+|..|.++++
T Consensus 23 ~~~La~~A~~~Al~dAgl~~~dId~vi~~~~~~~~~~~~~~a~~va~~lG~~-~~~~~~v~-~~Casg~~al~~A~~~I~ 100 (399)
T PRK06059 23 FVEYGVVAARAALADAGLDWRDVQLVVGADTIRNGYPGFVAGATFAQALGWN-GAPVSSSY-AACASGSQALQSARAQIL 100 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCccCCccHHHHHHHHhCCC-CCceeccc-chhHHHHHHHHHHHHHHH
Confidence 4789999999999999999999999998754 2 233455678899999997 58899999 599999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+++||+++|.+|.
T Consensus 101 sG~~~~vLvvg~e~~s~ 117 (399)
T PRK06059 101 AGLCDVALVVGADTTPK 117 (399)
T ss_pred CCCCCEEEEEEEcccCC
Confidence 99999999999998763
No 59
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=99.30 E-value=2.6e-10 Score=120.64 Aligned_cols=185 Identities=12% Similarity=0.119 Sum_probs=114.4
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcC-CCChhhHHHHHHHHHHhCCCceE--ecc---CCCcCCCCCCcHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTG-DFDESSLEFQRKILERSGLGEET--YVP---DAMHYLPPRPSMAAAR 171 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~-~~~~~~~~f~~~i~~~sGi~~r~--~~~---~~~~~~~~~~~~~~~~ 171 (504)
++|.|+|+|+..|.. .+.+++.+.+..-. .+.+-. + ++..+...+. ..+ +..+ +++. -....
T Consensus 1 ~~v~ItG~g~~~p~g---~~~~~~~~~l~~g~s~~~~~~-----~-~~~~~~~~~~~g~i~~f~~~~~-~~~~--~~~~~ 68 (407)
T TIGR03150 1 RRVVVTGLGAVTPLG---NGVEEFWENLLAGKSGIGPIT-----R-FDASDLPVKIAGEVKDFDPEDY-IDKK--EARRM 68 (407)
T ss_pred CcEEEEcceEECCCc---CCHHHHHHHHHcCCCeeEECC-----c-ccccCCCCcEEEEeCCcChhhc-CCHH--HHhhc
Confidence 369999999999983 57888888765310 011000 0 0001111110 011 0001 1110 00111
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecCC------------------CC--------CC-chHHHHHHHc
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGI----LVVNCSLF------------------NP--------TP-SLSAMIVNKY 220 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~----LI~~~s~~------------------~~--------~P-s~a~~I~~~l 220 (504)
....+|+.+|++++|+++|++++++|. +++.++.. .. .+ ..+..|...+
T Consensus 69 ~~~~~l~~~aa~~Al~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 148 (407)
T TIGR03150 69 DRFIQYALAAAKEAVEDSGLDIEEEDAERVGVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRY 148 (407)
T ss_pred CHHHHHHHHHHHHHHHhcCCCcccCCccceEEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHh
Confidence 225789999999999999999999886 55544211 00 11 1456788899
Q ss_pred CCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----------C--cC--------CCCcCcc
Q 010687 221 KLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN-----------W--YF--------GNKKSML 279 (504)
Q Consensus 221 Gl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~-----------~--~~--------~~dr~~l 279 (504)
|++ ..++.+. .+|++++.||..|.++|++|..+.+||++.|..... + +. +-|..
T Consensus 149 gl~--g~~~~v~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~ls~~~~~~~~~~~pfd~~-- 223 (407)
T TIGR03150 149 GAK--GPNHAVV-TACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAMKALSTRNDDPEKASRPFDKD-- 223 (407)
T ss_pred CCC--Ccccccc-cHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHhCcccCCCCCCCcCCCCCcCC--
Confidence 996 5788888 599999999999999999999999999999963220 0 00 00111
Q ss_pred ccccccccccEEEEEecccc
Q 010687 280 IPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 280 ~~~~lfgDGAaA~LLs~~~~ 299 (504)
-...+.||||+|+||++.+.
T Consensus 224 ~~g~~~gEGAaalvL~~~~~ 243 (407)
T TIGR03150 224 RDGFVMGEGAGVLVLEELEH 243 (407)
T ss_pred CCcEEEeceEEEEEEeeHHH
Confidence 02467899999999997653
No 60
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.28 E-value=8.7e-10 Score=117.68 Aligned_cols=182 Identities=14% Similarity=0.187 Sum_probs=112.0
Q ss_pred ceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHH
Q 010687 99 SIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVM 178 (504)
Q Consensus 99 ~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la 178 (504)
+|.|.|+|+.-|- -.+.+++.+.+.. |. +. ++-..+ +...++..+....-+. .++.. +. .......++
T Consensus 12 ~VvITG~G~vs~~---G~~~~~~~~~L~~-G~-s~--i~~~~~-~~~~~~~~~~~g~~~~--~~~~~-~~-~~~~~~~~~ 79 (425)
T PRK06501 12 IVAVTGMGVVTSL---GQGKADNWAALTA-GE-SG--IHTITR-FPTEGLRTRIAGTVDF--LPESP-FG-ASALSEALA 79 (425)
T ss_pred CEEEEeeeEECCC---CCCHHHHHHHHHc-CC-Cc--eEcCCc-ccccCCCCceEEEEee--ccccc-cc-ccCHHHHHH
Confidence 5999999999987 3577888887653 11 00 000000 0011111110000000 00100 00 011246688
Q ss_pred HHHHHHHHHhCCCCCCCcC------------------EEEEeec----------------CCC-------CCCchHHHHH
Q 010687 179 FGALDNLFANTNVKPKDIG------------------ILVVNCS----------------LFN-------PTPSLSAMIV 217 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId------------------~LI~~~s----------------~~~-------~~Ps~a~~I~ 217 (504)
..|++++|+++|+++.+.+ .++..+. ... ..|+.+..|+
T Consensus 80 ~~aa~~Al~dAgl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~ 159 (425)
T PRK06501 80 RLAAEEALAQAGIGKGDFPGPLFLAAPPVELEWPARFALAAAVGDNDAPSYDRLLRAARGGRFDALHERFQFGSIADRLA 159 (425)
T ss_pred HHHHHHHHHHcCCCccccccceeeccccccCCCCceEEEEEecCCccHHHHHHHHhhcCcccCChhhhhhcccHHHHHHH
Confidence 9999999999999654422 1111111 011 3567889999
Q ss_pred HHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc---------------CcCCC------cCC--C
Q 010687 218 NKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTEN---------------ITQNW------YFG--N 274 (504)
Q Consensus 218 ~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~---------------~S~~~------~~~--~ 274 (504)
.+||++ ..+++++ .+|++++.||..|.++|++|..+.+||+++|. ++..- ..+ .
T Consensus 160 ~~~gl~--G~~~~i~-~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~ls~~~~~~~~~~rpfd~ 236 (425)
T PRK06501 160 DRFGTR--GLPISLS-TACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQNDPPEKASKPFSK 236 (425)
T ss_pred HHhCCC--CCceeec-CccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhccccCCCCCCcccCCCCC
Confidence 999996 5789999 59999999999999999999999999999993 22100 001 2
Q ss_pred CcCccccccccccccEEEEEecccc
Q 010687 275 KKSMLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 275 dr~~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
+|+ ..++||||+|+||++.+.
T Consensus 237 ~r~----G~v~GEGaaalVLe~~~~ 257 (425)
T PRK06501 237 DRD----GFVMAEGAGALVLESLES 257 (425)
T ss_pred CCC----CeeeeccEEEEEECcHHH
Confidence 333 478999999999998654
No 61
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=99.27 E-value=3.5e-10 Score=119.62 Aligned_cols=94 Identities=20% Similarity=0.215 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
+.+|+.+|++++|+++|++|+|||.+|++++ +.....+........+|++.++++++++ ++|++|+.|+..|.+++++
T Consensus 31 ~~eL~~~a~~~aL~~Agi~~~dID~vi~G~~~~~~~~~~~~~~~~l~ag~~~~~p~~~V~-~aCaSG~~Av~~A~~~I~s 109 (397)
T PRK06954 31 APQLGAAAIAAAVERAGLKPEQIDEVVMGCVLPAGQGQAPARQAALGAGLPLSVGCTTVN-KMCGSGMRAAMFAHDMLVA 109 (397)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccchHHHHHHHHcCCCCCCccEeecc-ccchHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999999864 3333334444455567777679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||+++|.+|.
T Consensus 110 G~~d~vLv~G~E~ms~ 125 (397)
T PRK06954 110 GSVDVIVAGGMESMTN 125 (397)
T ss_pred CCCCEEEEEeeeccCC
Confidence 9999999999999883
No 62
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=99.26 E-value=2.1e-10 Score=121.49 Aligned_cols=123 Identities=11% Similarity=0.063 Sum_probs=90.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC-cC----EEEEeecCC-----------------------CCC--CchHHHHHHHcCC
Q 010687 173 EAEQVMFGALDNLFANTNVKPKD-IG----ILVVNCSLF-----------------------NPT--PSLSAMIVNKYKL 222 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~d-Id----~LI~~~s~~-----------------------~~~--Ps~a~~I~~~lGl 222 (504)
....++..|++++|+++|+++++ ++ .+++.++.. ... ...+..|...+|+
T Consensus 71 ~~~~l~~~aa~~Al~dAGl~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (407)
T cd00828 71 RTTLLALVATEEALADAGITDPYEVHPSEVGVVVGSGMGGLRFLRRGGKLDARAVNPYVSPKWMLSPNTVAGWVNILLLS 150 (407)
T ss_pred HHHHHHHHHHHHHHHhCCCCccccCCccCeEEEEeeccCCHHHHHHHHHHHhhccCCcccchhccccchHHHHHHHHhCc
Confidence 36789999999999999998766 43 233333210 111 4567889999999
Q ss_pred CCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC--------------------CcCCCCcCccccc
Q 010687 223 RGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN--------------------WYFGNKKSMLIPN 282 (504)
Q Consensus 223 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~--------------------~~~~~dr~~l~~~ 282 (504)
+ ..+++.+. .+|++++.||..|.++|++|..+.+||+++|..+.. ...+.|+. -..
T Consensus 151 ~-~Gp~~tv~-~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~~~~~~pfd~~--~~G 226 (407)
T cd00828 151 S-HGPIKTPV-GACATALEALDLAVEAIRSGKADIVVVGGVEDPLEEGLSGFANMGALSTAEEEPEEMSRPFDET--RDG 226 (407)
T ss_pred C-CCCCcCcc-cHHHHHHHHHHHHHHHHHcCCCCEEEEccccccChHHHHHHHHcCCCCCCCCCCCcccCCCcCC--CCc
Confidence 3 25789999 599999999999999999999999999999986510 00111111 135
Q ss_pred cccccccEEEEEecccc
Q 010687 283 CLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 283 ~lfgDGAaA~LLs~~~~ 299 (504)
.++||||+|+||++.+.
T Consensus 227 ~~~gEGAaalvLe~~~~ 243 (407)
T cd00828 227 FVEAEGAGVLVLERAEL 243 (407)
T ss_pred EEeecceEEEEEeeHHH
Confidence 78999999999998654
No 63
>PRK05790 putative acyltransferase; Provisional
Probab=99.26 E-value=5.7e-10 Score=117.90 Aligned_cols=93 Identities=13% Similarity=0.188 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+|+++. +....+..+..++..+|++.++++++++ .+|++++.++..|.+++++
T Consensus 26 ~~~La~~A~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~gl~~~~~~~~v~-~~Casg~~al~~A~~~I~s 104 (393)
T PRK05790 26 AVELGAIVIKAALERAGVPPEQVDEVIMGQVLQAGAGQNPARQAALKAGLPVEVPALTIN-KVCGSGLKAVALAAQAIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeEEEEEecCCCCCCcHHHHHHHHcCCCCCCceeeec-ccchHHHHHHHHHHHHHHc
Confidence 6899999999999999999999999998753 2222344455677788997567899999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010687 253 HRNTYAVVVSTENIT 267 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S 267 (504)
|..+++||+++|.+|
T Consensus 105 G~~d~vLv~G~e~~s 119 (393)
T PRK05790 105 GDADIVVAGGQESMS 119 (393)
T ss_pred CCCCEEEEEeeeccc
Confidence 999999999999764
No 64
>PRK12404 stage V sporulation protein AD; Provisional
Probab=99.26 E-value=5.1e-10 Score=112.87 Aligned_cols=116 Identities=16% Similarity=0.276 Sum_probs=93.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
-.+|+.+|++++|+++|++++|||.+++.+......|+ ..+++.||++ .+++.+ +||++..||.+|..++++|
T Consensus 54 E~~L~~EA~~~AL~kAGI~~~DID~i~vGdL~nQ~ips--sfvar~LGIP----~~gV~g-ACSTg~eAL~lAa~~VaSG 126 (334)
T PRK12404 54 ERKLLEEACSRAIEKAKLRKEDIQFFLAGDLMNQITPT--SFAARTLGIP----YLGLFG-ACSTSMEGLALAALIVNSG 126 (334)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCcCcH--HHHHHHhCCC----ccceee-cCHHHHHHHHHHHHHHHcC
Confidence 56799999999999999999999999999876666676 4999999954 599995 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC---CCcC----CCCcCccccccccccccEEEEEeccc
Q 010687 254 RNTYAVVVSTENITQ---NWYF----GNKKSMLIPNCLFRVGGSAVLLSNKA 298 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~---~~~~----~~dr~~l~~~~lfgDGAaA~LLs~~~ 298 (504)
..++|||+++-..+. .|.. +..|.. +...---||+|+||++..
T Consensus 127 ~Ad~VLavtsSH~~~aErqfR~P~eyG~Qrp~--taqwTvTgaga~~l~~~~ 176 (334)
T PRK12404 127 GAKYVLTGASSHNAAVEKQFRYPTEYGGQKPP--TAQWTVTGAGAAILSKTG 176 (334)
T ss_pred CCCEEEEEeCcccchhhhhccCcccccCcCCC--cccEEEEceEEEEEecCC
Confidence 999999998766542 2221 234442 445556789999999764
No 65
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=99.24 E-value=6.2e-10 Score=117.69 Aligned_cols=91 Identities=13% Similarity=0.300 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC---CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNP---TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~---~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~l 249 (504)
..+|+.+|++++|+++|++|+|||.+|+++. ++.. .++....+...++ .++++++++ ++|++++.++..|.++
T Consensus 32 ~~~L~~~a~~~AL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~l~a~~~--~~~p~~~V~-~~CaSg~~ai~~A~~~ 108 (394)
T PRK06445 32 PEELAAMLINRLIEKTGIKPEEIDDIITGCALQVGENWLYGGRHPIFLARLP--YNIPAMAVD-RQCASSLTTVSIGAME 108 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCeeEEEeecCCCcccccHHHHHHHHcCCC--CCCcchhhh-hhhHHHHHHHHHHHHH
Confidence 6889999999999999999999999998864 3322 2344444555565 468999999 6999999999999999
Q ss_pred HhcCCCCeEEEEEeccCc
Q 010687 250 LQVHRNTYAVVVSTENIT 267 (504)
Q Consensus 250 L~a~~~~~aLVVs~E~~S 267 (504)
+++|..+++||+++|.+|
T Consensus 109 I~sG~~d~vLv~G~e~ms 126 (394)
T PRK06445 109 IATGMADIVIAGGVEHMT 126 (394)
T ss_pred HHcCCCCEEEEeeecccc
Confidence 999999999999999766
No 66
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=99.23 E-value=6.5e-10 Score=117.45 Aligned_cols=94 Identities=14% Similarity=0.168 Sum_probs=86.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLF--NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~--~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+.+|+..+++.+|+++|++|++||.||+.|... ...+.++.+++-+-|++.+++++.++ +.|++++.|+.+|.+.++
T Consensus 29 ~~~L~~~~~~~~l~r~~i~~~~id~vi~G~~~~~g~~g~n~aR~~al~aglp~~vp~~tvn-r~C~Sgl~ai~~aa~~I~ 107 (417)
T PRK06025 29 PQHLAATVLKALAERNGLNTADVDDIIWSTSSQRGKQGGDLGRMAALDAGYDIKASGVTLD-RFCGGGITSVNLAAAQIM 107 (417)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHCCEEEEEcCCCcCcccCcHHHHHHHhCCCCCCCCeeeec-cccchHHHHHHHHHHHHH
Confidence 789999999999999999999999999987632 22477889999999999899999999 899999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+-+|..+.|.+|+
T Consensus 108 ~G~~~~~laGG~EsmS~ 124 (417)
T PRK06025 108 SGMEDLVIAGGTEMMSY 124 (417)
T ss_pred cCCCCEEEEeeeeccCC
Confidence 99999999999999996
No 67
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.23 E-value=1.4e-09 Score=115.42 Aligned_cols=185 Identities=12% Similarity=0.142 Sum_probs=115.4
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceE--eccCCC--cCCCCCCcHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGD--FDESSLEFQRKILERSGLGEET--YVPDAM--HYLPPRPSMAAAR 171 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~--~~~~~~--~~~~~~~~~~~~~ 171 (504)
++|.|+|+||..|. -.+.++|.+.+.. +. +.+-. +| ...+...+. .+++.. ...++. . ....
T Consensus 2 ~~v~ItG~g~~~p~---g~~~~~~w~~l~~-g~~~~~~~~-~~-----~~~~~~~~~~g~i~~f~~~~~~~~~-~-~~~~ 69 (411)
T PRK07314 2 RRVVVTGLGAVSPL---GNDVESTWKNLLA-GKSGIGPIT-HF-----DTSDLAVKIAGEVKDFNPDDYMSRK-E-ARRM 69 (411)
T ss_pred CcEEEEcceEECCC---cCCHHHHHHHHHh-CCCcEEECC-cc-----cccCCCccEEEEeCCcChhhcCCHH-H-hhcC
Confidence 47999999999998 3677888887653 11 00000 00 011111110 011000 001110 0 0011
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecCC----------------------C----CCCc-hHHHHHHHc
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIG----ILVVNCSLF----------------------N----PTPS-LSAMIVNKY 220 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId----~LI~~~s~~----------------------~----~~Ps-~a~~I~~~l 220 (504)
.....|+..|+.++|+++|++++++| .++++++.. . ..++ .+..|...+
T Consensus 70 ~~~~~l~~~aa~~Al~dAGl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~ 149 (411)
T PRK07314 70 DRFIQYGIAAAKQAVEDAGLEITEENADRIGVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRY 149 (411)
T ss_pred CHHHHHHHHHHHHHHHHcCCCcccCCcccEEEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHh
Confidence 12567899999999999999998888 455554311 0 1112 456789999
Q ss_pred CCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCC---------------------cCCCCcCcc
Q 010687 221 KLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNW---------------------YFGNKKSML 279 (504)
Q Consensus 221 Gl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~---------------------~~~~dr~~l 279 (504)
|++ -.++-+. .+|++++.||..|.++|++|..+.+||.++|..+..+ ..+-|+..
T Consensus 150 gl~--Gp~~tv~-~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~~~ls~~~~~p~~~~~pfd~~~- 225 (411)
T PRK07314 150 GAK--GPNHSIV-TACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAARALSTRNDDPERASRPFDKDR- 225 (411)
T ss_pred CCC--Cccccch-hhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHhccccCCCCCCCcCcCCCcCCC-
Confidence 996 4678888 5999999999999999999999999999999643210 00001110
Q ss_pred ccccccccccEEEEEecccc
Q 010687 280 IPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 280 ~~~~lfgDGAaA~LLs~~~~ 299 (504)
..+++||||+|+||++.+.
T Consensus 226 -dG~~~geGAaavvL~~~~~ 244 (411)
T PRK07314 226 -DGFVMGEGAGILVLEELEH 244 (411)
T ss_pred -CCEeEEceEEEEEEeeHHH
Confidence 2468999999999997653
No 68
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=99.20 E-value=2.4e-09 Score=113.55 Aligned_cols=121 Identities=17% Similarity=0.173 Sum_probs=91.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCE----EEEeec-CCC-------------------CCCchHHHHHHHcCCCCcceeE
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGI----LVVNCS-LFN-------------------PTPSLSAMIVNKYKLRGNIRSF 229 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~----LI~~~s-~~~-------------------~~Ps~a~~I~~~lGl~~~~~~~ 229 (504)
...|+..|++++|+++|++++++|. ++++++ .++ ..+..+..|+..+|++ ..++
T Consensus 87 ~~~l~~~aa~~AL~dAgl~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~i~~~~gl~--g~~~ 164 (421)
T cd00833 87 QQRLLLEVAWEALEDAGYSPESLAGSRTGVFVGASSSDYLELLARDPDEIDAYAATGTSRAFLANRISYFFDLR--GPSL 164 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCchhcCCCCceEEeCcCHHHHHHHHhhcccccCcccccCcchHHHHHHHHHHcCCC--CCce
Confidence 5789999999999999999887774 555542 111 1244677899999996 4789
Q ss_pred EecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------------CcCCCCcCccccccccccccEEEE
Q 010687 230 NLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN----------------WYFGNKKSMLIPNCLFRVGGSAVL 293 (504)
Q Consensus 230 dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~----------------~~~~~dr~~l~~~~lfgDGAaA~L 293 (504)
.+. .+|++++.||..|.++|++|..+.+||+++|..+.. ...+-|+. -...++||||+|+|
T Consensus 165 ~v~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~pf~~~--~~g~~~geGAaalv 241 (421)
T cd00833 165 TVD-TACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLSPDGRCRPFDAD--ADGYVRGEGVGVVV 241 (421)
T ss_pred eec-cHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCCCCCCCCCCCCCCCC--CCCeeeeceEEEEE
Confidence 999 599999999999999999999999999999975310 00111111 13568999999999
Q ss_pred Eecccc
Q 010687 294 LSNKAK 299 (504)
Q Consensus 294 Ls~~~~ 299 (504)
|++.+.
T Consensus 242 L~~~~~ 247 (421)
T cd00833 242 LKRLSD 247 (421)
T ss_pred EeeHHH
Confidence 997654
No 69
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=99.20 E-value=1.8e-09 Score=113.98 Aligned_cols=94 Identities=11% Similarity=0.152 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCC-CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~-~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|+.++|||.+|++++ ++.. .+.++.+++..+|++..+++++++ .+|++|+.|+..|.+.++
T Consensus 27 ~~eLa~~A~~~AL~~ag~~~~dID~vi~g~~~~~~~~g~~~a~~~~~~lGl~~~~p~~~V~-~aCaSG~~Al~~A~~~I~ 105 (391)
T PRK07661 27 PDDLGALVVKETLKRAGNYEGPIDDLIIGCAMPEAEQGLNMARNIGALAGLPYTVPAITIN-RYCSSGLQSIAYGAERIM 105 (391)
T ss_pred HHHHHHHHHHHHHHhcCCChhHCCEEEEEeccccccccchHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHH
Confidence 5789999999999999988899999999864 3332 367777899999998559999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+||+++|.+|.
T Consensus 106 sG~~d~vLv~G~E~ms~ 122 (391)
T PRK07661 106 LGHSEAVIAGGAESMSL 122 (391)
T ss_pred cCCCCEEEEEEEeeccc
Confidence 99999999999998763
No 70
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=99.19 E-value=1.6e-09 Score=112.97 Aligned_cols=242 Identities=16% Similarity=0.204 Sum_probs=157.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
+.+|+..|++++++ |++ ++||.+|+.+.... .+..+..+....|++..++++.++ .+|++++.++..|.+.+++|
T Consensus 25 ~~~L~~~a~~~~~~--gi~-~~Id~vi~G~~~~~-~~~~~r~~~~~~Gl~~~~p~~tV~-~~CaSG~~Ai~~a~~~I~sG 99 (361)
T PRK06690 25 VQQLAAPLLTFLSK--GME-REIDDVILGNVVGP-GGNVARLSALEAGLGLHIPGVTID-RQCGAGLEAIRTACHFIQGG 99 (361)
T ss_pred HHHHHHHHHHHHHc--cch-hhcCEEEEEecCCC-cchHHHHHHHHcCCCCCCCceehh-hhhhHHHHHHHHHHHHHHCC
Confidence 68899999999866 886 89999999864321 244455688999998679999999 69999999999999999999
Q ss_pred CCCeEEEEEeccCcCC-C----------cCC---------------CCcC------------------------c-----
Q 010687 254 RNTYAVVVSTENITQN-W----------YFG---------------NKKS------------------------M----- 278 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~~-~----------~~~---------------~dr~------------------------~----- 278 (504)
..+.+||++.|.+|.. + +.. -.|. .
T Consensus 100 ~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~ 179 (361)
T PRK06690 100 AGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAEYVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFN 179 (361)
T ss_pred CCCEEEEeccccccCCCcccccccCcccccCccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceeccc
Confidence 9999999999998751 1 100 0000 0
Q ss_pred ------c----------------------c---cccccccccEEEEEeccccccc---cccceEeeEEEEeecCCCcccc
Q 010687 279 ------L----------------------I---PNCLFRVGGSAVLLSNKAKDRR---RAKYKLVHVVRTHKGADDNAFK 324 (504)
Q Consensus 279 ------l----------------------~---~~~lfgDGAaA~LLs~~~~~~~---~~~~~l~~~v~t~~~~d~~~~~ 324 (504)
+ + ..|..+|||+|+||.+.+..++ ++.+++.+ ....+.+
T Consensus 180 ~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~DGAaAvvl~s~e~A~~lg~~p~~~i~~---~~~~~~~---- 252 (361)
T PRK06690 180 GLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVNDGACAVLVMEEGQARKLGYKPVLRFVR---SAVVGVD---- 252 (361)
T ss_pred CccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCCCCeEEEEEecHHHHHHcCCCceEEEEE---EEEeccC----
Confidence 0 0 0133479999999987543211 01111111 1100000
Q ss_pred ceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEEEEc
Q 010687 325 CVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIH 403 (504)
Q Consensus 325 ~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~H 403 (504)
+ +.+.. + .....+++++ ..+. .+|||+|.+|
T Consensus 253 ----~-------------~~~~~------------~-------------~~~a~~~al~~Agl~------~~Did~~ei~ 284 (361)
T PRK06690 253 ----P-------------NLPGT------------G-------------PIFAVNKLLNEMNMK------VEDIDYFEIN 284 (361)
T ss_pred ----c-------------ccchh------------H-------------HHHHHHHHHHHcCCC------HHHcCEeeec
Confidence 0 00000 0 0011244554 3343 3899999999
Q ss_pred CCCHHHHHHHHHHcCCCchhhhhh---hhccccccccccchHHHHHHHHHHcCCCCCCCE-EEEEeechhHHhhheeeEe
Q 010687 404 AGGRAVIDELEKNLQLLPEHVEAS---RMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNR-VWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 404 q~g~~vl~~i~~~Lgl~~e~~~~S---~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~-Vlli~fG~G~~~~sav~r~ 479 (504)
+..........+.||++++++.++ ....|.+|+||+..+...+.++.++| |.+ +..+..|.|. -.+++|+.
T Consensus 285 eafa~~~~~~~e~lgl~~~~vn~~GG~la~Ghp~GatG~~~~~~~~~ql~~~~----~~~g~~~~c~~gG~-g~a~~~e~ 359 (361)
T PRK06690 285 EAFASKVVACAKELQIPYEKLNVNGGAIALGHPYGASGAMLVTRLFYQAKRED----MKYGIATLGIGGGI-GLALLFEK 359 (361)
T ss_pred chhHHHHHHHHHhcCCCchhcccCCcHHhccCchhhhHHHHHHHHHHHHHHhC----CCEEEEEEcccCcc-eeEEEEEe
Confidence 999999999999999998877532 22378899999999999998887643 222 2333344443 24667665
Q ss_pred e
Q 010687 480 L 480 (504)
Q Consensus 480 ~ 480 (504)
+
T Consensus 360 ~ 360 (361)
T PRK06690 360 V 360 (361)
T ss_pred c
Confidence 4
No 71
>PRK06158 thiolase; Provisional
Probab=99.17 E-value=2.3e-09 Score=112.99 Aligned_cols=87 Identities=13% Similarity=0.038 Sum_probs=74.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
..+|+.+|++++|+++|++++|||.+++++. +...|+ ..+++++|++ ..+++++. .||+++..++..|..++++|
T Consensus 28 ~~eL~~eA~~~Al~dAgl~~~dID~iv~~~~-~~~~~~--~~la~~lGl~-~~~~~~~~-~g~~s~~~al~~A~~~I~sG 102 (384)
T PRK06158 28 AMELLAQAAHRALADAGLTMADVDGLFTASP-DDALWG--LSVAEYLGIR-PRFVDGTM-IGGSSFLAHLLPAALALEAG 102 (384)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecC-CCCCcH--HHHHHHcCCC-Ceeecccc-CccHHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999999998753 333444 5799999997 57888998 69999999999999999999
Q ss_pred CCCeEEEE-Eecc
Q 010687 254 RNTYAVVV-STEN 265 (504)
Q Consensus 254 ~~~~aLVV-s~E~ 265 (504)
..++|||+ +.|.
T Consensus 103 ~~d~vLV~~g~~~ 115 (384)
T PRK06158 103 LCDVALICYGSNQ 115 (384)
T ss_pred CCCEEEEeecccc
Confidence 99999998 4443
No 72
>PRK08256 lipid-transfer protein; Provisional
Probab=99.15 E-value=3.7e-09 Score=111.63 Aligned_cols=89 Identities=15% Similarity=0.168 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+++.+.. +... ...+...+|++ .+++++++ .+|++++.+|..|.++|++
T Consensus 22 ~~~La~~A~~~Al~dAGl~~~dID~~~~g~~~~~~~~---~~~~~~~lGl~-~~~~~~v~-~~caSg~~ai~~A~~~I~s 96 (391)
T PRK08256 22 YPDMAAEAGRAALADAGIDYDAVQQAYVGYVYGDSTS---GQRALYEVGMT-GIPIVNVN-NNCSTGSTALFLARQAVRS 96 (391)
T ss_pred HHHHHHHHHHHHHHHcCCChHHCCeeEEEEEeCCcch---hHHHHHHcCCC-CCCCcccc-cccHHHHHHHHHHHHHHHC
Confidence 57899999999999999999999998877542 2211 23567789996 57889999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010687 253 HRNTYAVVVSTENIT 267 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S 267 (504)
|..+++||+++|.+|
T Consensus 97 G~~d~vLv~g~e~~s 111 (391)
T PRK08256 97 GAADCALALGFEQMQ 111 (391)
T ss_pred CCCCEEEEEEEeecc
Confidence 999999999999875
No 73
>PLN02287 3-ketoacyl-CoA thiolase
Probab=99.13 E-value=4.8e-09 Score=112.50 Aligned_cols=94 Identities=14% Similarity=0.206 Sum_probs=80.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCc-hHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPS-LSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps-~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++++|||.+|+++. +....+. .+.+++..+|+++.+++++++ .+|++|..++..|.+.++
T Consensus 71 ~~eLa~eA~~~AL~dAgl~~~dID~vv~G~~~~~~~~~~~~~r~~a~~~Gl~~~~pa~~V~-~~CaSG~~Ai~~Aa~~I~ 149 (452)
T PLN02287 71 PDDLLAPVLKAVVEKTGLNPSEVGDIVVGTVLAPGSQRANECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADVAAAIK 149 (452)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeecCcccccchHHHHHHHHCCCCCCcceEEEe-ccCchHHHHHHHHHHHHH
Confidence 6889999999999999999999999998764 4443343 445677788998668999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+||++.|.+|.
T Consensus 150 sG~~dvvLv~GvE~mS~ 166 (452)
T PLN02287 150 AGFYDIGIGAGVESMTT 166 (452)
T ss_pred cCCCCeEEEEeEEecCC
Confidence 99999999999998753
No 74
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=99.11 E-value=8.1e-09 Score=109.19 Aligned_cols=93 Identities=17% Similarity=0.140 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLF-NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+|+.+... ...+..+..++..+|++.+++++.++ .+|+++..++..|.+.+++
T Consensus 25 ~~~L~~~a~~~al~dAgl~~~~ID~vv~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 103 (394)
T PLN02644 25 ATELGSIAIQAALERAGVDPALVQEVFFGNVLSANLGQAPARQAALGAGLPPSTICTTVN-KVCASGMKAVMLAAQSIQL 103 (394)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCcCCcCCcHHHHHHHhcCCCCCCceEEEe-ccchHHHHHHHHHHHHHHc
Confidence 688999999999999999999999999865321 11234455688999997668899999 5999999999999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010687 253 HRNTYAVVVSTENIT 267 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S 267 (504)
|..+.+||++.|.+|
T Consensus 104 G~~d~vlv~G~E~~s 118 (394)
T PLN02644 104 GINDVVVAGGMESMS 118 (394)
T ss_pred CCCCEEEEEeEEecC
Confidence 999999999988765
No 75
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.11 E-value=7.8e-09 Score=110.22 Aligned_cols=121 Identities=14% Similarity=0.146 Sum_probs=86.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCc-C----EEEEeecC-CC---------------------CCC-----chHHHHHHHcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDI-G----ILVVNCSL-FN---------------------PTP-----SLSAMIVNKYK 221 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dI-d----~LI~~~s~-~~---------------------~~P-----s~a~~I~~~lG 221 (504)
...++..|++++|+++|++++++ + .+++.++. .. ..| ..+..|...||
T Consensus 82 ~~~l~~~aa~~Al~dAgl~~~~~~~~~~~Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g 161 (424)
T PRK06333 82 FILFAMAAAKEALAQAGWDPDTLEDRERTATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYG 161 (424)
T ss_pred HHHHHHHHHHHHHHhcCCCccccCCcccEEEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhC
Confidence 56789999999999999988766 3 34444431 10 011 13567889999
Q ss_pred CCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCC----------cC------------CCCcCcc
Q 010687 222 LRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNW----------YF------------GNKKSML 279 (504)
Q Consensus 222 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~----------~~------------~~dr~~l 279 (504)
++ -+++.+. .+|++++.||..|.++|++|..+.+||+++|.....+ +. +-|+..
T Consensus 162 l~--Gp~~~v~-~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~f~~~~~l~~~~~~~p~~~~~Pfd~~~- 237 (424)
T PRK06333 162 FK--GPLGAPV-TACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDR- 237 (424)
T ss_pred CC--CCCcccc-chhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHcccccccCCCCCCcCCCCCCCCC-
Confidence 96 5778888 5999999999999999999999999999999732100 00 001110
Q ss_pred ccccccccccEEEEEecccc
Q 010687 280 IPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 280 ~~~~lfgDGAaA~LLs~~~~ 299 (504)
...+.||||+++||++.+.
T Consensus 238 -~G~~~gEGaa~lvLe~~~~ 256 (424)
T PRK06333 238 -DGFVMGEGAGILVIETLEH 256 (424)
T ss_pred -CCeEEecceEEEEEeeHHH
Confidence 2357899999999997543
No 76
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=99.10 E-value=3.8e-10 Score=119.15 Aligned_cols=94 Identities=15% Similarity=0.220 Sum_probs=85.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCc-hHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPS-LSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps-~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+.+|+.+|++++|+++|++|+|||.+|+++. ++...|+ .+..++.++|++.++++++++ ++|++|+.|+.+|.++++
T Consensus 27 ~~dL~~~A~~~aL~~agi~~~~ID~vi~G~~~~~~~~~~~~a~~i~~~lGl~~~~p~~~V~-~aCaSg~~Al~~A~~~I~ 105 (392)
T PRK07108 27 GATLGGHVVQHAVERAKLDPAEVEDVIMGCANPEGATGANIARQIALRAGLPVTVPGMTVN-RFCSSGLQTIALAAQRVI 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcEEEEEeecccccccHHHHHHHHHcCCCCCCceeeec-chhhHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 5555554 888899999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+|+++.|.+|.
T Consensus 106 sG~~d~vlagGvE~ms~ 122 (392)
T PRK07108 106 AGEGDVFVAGGVESISC 122 (392)
T ss_pred CCCCCEEEEEEEeccCC
Confidence 99999999999999986
No 77
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=99.09 E-value=8.2e-09 Score=109.74 Aligned_cols=121 Identities=17% Similarity=0.239 Sum_probs=87.0
Q ss_pred HHHHHHHHHHHHHHhCCCC---CCCcCEEEEeecC----------------CCCCC---------chHHHHHHHcCCCCc
Q 010687 174 AEQVMFGALDNLFANTNVK---PKDIGILVVNCSL----------------FNPTP---------SLSAMIVNKYKLRGN 225 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~---~~dId~LI~~~s~----------------~~~~P---------s~a~~I~~~lGl~~~ 225 (504)
...++..|++++|+++|++ +++|++++.++.. .+..| ..+..|+..||++
T Consensus 80 ~~~lal~Aa~eAl~dAgl~~~~~~riGvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~-- 157 (410)
T PRK07103 80 SAQAALAAAREAWRDAALGPVDPDRIGLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIR-- 157 (410)
T ss_pred HHHHHHHHHHHHHHhcCcCCCCCCCEEEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCC--
Confidence 5679999999999999986 4667666654321 11112 2566788999996
Q ss_pred ceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CcCC----------------------CcCCCCcCccccc
Q 010687 226 IRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTEN-ITQN----------------------WYFGNKKSMLIPN 282 (504)
Q Consensus 226 ~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~-~S~~----------------------~~~~~dr~~l~~~ 282 (504)
.+++.++ .+|++++.||..|.++|++|..+.+||+++|. .+.. ...+-|+. -..
T Consensus 158 G~~~tv~-~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~~~l~~~~~~~~p~~~~rPfd~~--~dG 234 (410)
T PRK07103 158 GEGFTVG-GASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFDQD--RDG 234 (410)
T ss_pred CCccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHccccccCccCCCcccCcCCCCCC--CCC
Confidence 3678899 59999999999999999999999999999864 2110 00011111 024
Q ss_pred cccccccEEEEEecccc
Q 010687 283 CLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 283 ~lfgDGAaA~LLs~~~~ 299 (504)
.++||||+|+||++.+.
T Consensus 235 ~v~gEGaaalvLe~~~~ 251 (410)
T PRK07103 235 FIYGEACGAVVLESAES 251 (410)
T ss_pred eeEeeeEEEEEEccHHH
Confidence 68899999999997654
No 78
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=99.07 E-value=7.1e-09 Score=109.37 Aligned_cols=94 Identities=11% Similarity=0.240 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
+.+|+.+|++++|+++|++|++||.+++.+.. ...-+..+.+++..+|++.+++++.++ .+|++|+.|+..|.+.+++
T Consensus 27 ~~~L~~~a~~~al~~agi~~~~Id~vv~G~~~~~~~g~~~~r~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~A~~~I~s 105 (392)
T PRK06633 27 APMLAAHLIKDILQNSKIDPALVNEVILGQVITGGSGQNPARQTLIHAGIPKEVPGYTIN-KVCGSGLKSVALAANSIMT 105 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCccccccHHHHHHHHHCCCCCCccchhhc-chhHHHHHHHHHHHHHHHc
Confidence 78999999999999999999999999998642 222446677788999998679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+|+++.|.+|.
T Consensus 106 G~~dvvla~G~E~ms~ 121 (392)
T PRK06633 106 GDNEIVIAGGQENMSL 121 (392)
T ss_pred CCCCEEEEcccccCCC
Confidence 9999999999998874
No 79
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.04 E-value=7.6e-08 Score=102.21 Aligned_cols=121 Identities=17% Similarity=0.158 Sum_probs=88.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCE----EEEeecCC--------------------------CCCC-chHHHHHHHcCC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGI----LVVNCSLF--------------------------NPTP-SLSAMIVNKYKL 222 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~----LI~~~s~~--------------------------~~~P-s~a~~I~~~lGl 222 (504)
...++..|+.++|+++|+++++++. +++.++.. ...| ..+..|...+|+
T Consensus 72 ~~~l~~~Aa~~AL~dAGl~~~~~~~~r~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 151 (406)
T PRK08439 72 FIQLGLKAAREAMKDAGFLPEELDAERFGVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGL 151 (406)
T ss_pred HHHHHHHHHHHHHHHcCCCcccCCCCCEEEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCC
Confidence 5789999999999999999877763 34333210 0112 467789999999
Q ss_pred CCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-cCC---------C-----------cCCCCcCcccc
Q 010687 223 RGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENI-TQN---------W-----------YFGNKKSMLIP 281 (504)
Q Consensus 223 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~-S~~---------~-----------~~~~dr~~l~~ 281 (504)
+. .++.+. .+|++++.||..|.++|++|..+.+||+++|.. +.. . ..+-|+.. .
T Consensus 152 ~G--p~~~~~-~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~~--~ 226 (406)
T PRK08439 152 KG--PNLSSV-TACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGGFAAMKALSTRNDDPKKASRPFDKDR--D 226 (406)
T ss_pred CC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHHHHHhCccccCCCCCccCcCCccCCC--C
Confidence 84 678888 599999999999999999999999999999963 210 0 00111110 2
Q ss_pred ccccccccEEEEEecccc
Q 010687 282 NCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 282 ~~lfgDGAaA~LLs~~~~ 299 (504)
..++|+||+++||++.+.
T Consensus 227 G~v~gEGa~~lvLe~~~~ 244 (406)
T PRK08439 227 GFVMGEGAGALVLEEYES 244 (406)
T ss_pred cEEeeCceEEEEEccHHH
Confidence 468899999999997543
No 80
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=8.8e-10 Score=116.86 Aligned_cols=94 Identities=16% Similarity=0.238 Sum_probs=86.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++|+|||.+|++++ +....|.++..++..+|++.++++++++ .+|++++.++..|.+++++
T Consensus 26 ~~eLa~~A~~~AL~~agl~~~dID~vv~g~~~~~~~~~~~a~~va~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (404)
T PRK06205 26 AEELAATVIRALVERTGIDPARIDDVIFGQGYPNGEAPAIGRVAALDAGLPVTVPGMQLD-RRCGSGLQAVITAAMQVQT 104 (404)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCCChHHHHHHHHcCCCCCCceeehh-hhhhHHHHHHHHHHHHHHc
Confidence 6889999999999999999999999999865 5555688888899999998678999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vLv~G~E~ms~ 120 (404)
T PRK06205 105 GAADVVIAGGAESMSN 120 (404)
T ss_pred CCCCEEEEeeehhhcc
Confidence 9999999999999885
No 81
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=99.03 E-value=9.9e-08 Score=101.61 Aligned_cols=190 Identities=12% Similarity=0.124 Sum_probs=113.7
Q ss_pred hcCCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceE--eccCCCcCCCCCCcHHHHH
Q 010687 94 MTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEET--YVPDAMHYLPPRPSMAAAR 171 (504)
Q Consensus 94 ~~~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~ 171 (504)
|++ ++|.|+|+|+..|.. .+.+++.+.+.. |. + .+....+ ++..++..+. ..+ +... ....+-++.+
T Consensus 1 m~~-~~VvItG~g~~~p~g---~~~~~~w~~L~~-g~-s--~i~~~~~-~~~~~~~~~~~g~i~-~~~~-~~~~~~~~~~ 69 (414)
T PRK08722 1 MSK-RRVVVTGMGMLSPVG---NTVESSWKALLA-GQ-S--GIVNIEH-FDTTNFSTRFAGLVK-DFNC-EEYMSKKDAR 69 (414)
T ss_pred CCC-CCEEEEeeEEECCCC---CCHHHHHHHHHh-CC-C--eeeecCc-cccccCCCceeEEcC-CCCh-hHcCCHHHHh
Confidence 443 589999999999983 677888876542 11 0 0000000 0001111110 011 0000 0000111111
Q ss_pred --HHHHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC-----------------C--------CCC-chHHHHHH
Q 010687 172 --EEAEQVMFGALDNLFANTNVKPKDIG----ILVVNCS-LF-----------------N--------PTP-SLSAMIVN 218 (504)
Q Consensus 172 --~ea~~la~~Aa~~aL~~agi~~~dId----~LI~~~s-~~-----------------~--------~~P-s~a~~I~~ 218 (504)
.....++..|+.++|+++|+++++.+ .+++.++ .. . ..| ..+..|..
T Consensus 70 ~~d~~~~~~l~a~~~Al~dAGl~~~~~~~~r~Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~ 149 (414)
T PRK08722 70 KMDLFIQYGIAAGIQALDDSGLEVTEENAHRIGVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSI 149 (414)
T ss_pred hcCHHHHHHHHHHHHHHHHcCCCccccCCCCEEEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHH
Confidence 12456889999999999999754332 2444432 11 0 112 36778999
Q ss_pred HcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCC----------cC-----------CCCcC
Q 010687 219 KYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNW----------YF-----------GNKKS 277 (504)
Q Consensus 219 ~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~----------~~-----------~~dr~ 277 (504)
.+|++. +++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ .. +-|+.
T Consensus 150 ~~gl~G--p~~ti~-~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~~~ls~~~~~p~~~~rpfd~~ 226 (414)
T PRK08722 150 MRGLRG--PNIAIS-TACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAAKALSTRNDEPQKASRPWDKD 226 (414)
T ss_pred HhCCCC--Cccccc-cccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHcCCcccCCCCCccccCcCcCC
Confidence 999974 788899 5999999999999999999999999999999753210 00 11111
Q ss_pred ccccccccccccEEEEEecccc
Q 010687 278 MLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 278 ~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
. ...+.||||+|+||.+.+.
T Consensus 227 ~--~G~~~gEGaaalvLe~~~~ 246 (414)
T PRK08722 227 R--DGFVLGDGAGMMVLEEYEH 246 (414)
T ss_pred C--CceEeeceEEEEEEccHHH
Confidence 0 2467899999999997654
No 82
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=99.03 E-value=1e-09 Score=115.93 Aligned_cols=94 Identities=14% Similarity=0.178 Sum_probs=83.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++|+|||.+|++|. +....+..+..++..+|++.++++++++ .+|++|+.|+..|.+++++
T Consensus 26 ~~eLa~~A~~~aL~~agl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~Gl~~~~p~~~V~-~~CaSg~~Al~~A~~~I~s 104 (393)
T PRK08235 26 ATELGGIAIKEALERANVSAEDVEEVIMGTVLQGGQGQIPSRQAARAAGIPWEVQTETVN-KVCASGLRAVTLADQIIRA 104 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCCCCCHHHHHHHHcCCCCCcceeehh-hhhhHHHHHHHHHHHHHHC
Confidence 6899999999999999999999999999865 3212344556789999997679999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||+++|.+|.
T Consensus 105 G~~d~vLvvG~E~ms~ 120 (393)
T PRK08235 105 GDASVIVAGGMESMSN 120 (393)
T ss_pred CCCCEEEEEeeecccc
Confidence 9999999999999886
No 83
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=99.02 E-value=1.3e-09 Score=115.30 Aligned_cols=94 Identities=14% Similarity=0.264 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-CchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPT-PSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~-Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+.+|+.+|++++|+++|++|++||.+|++|. +.... +..+...+...|++.++++++++ ++|++|+.||.+|.++++
T Consensus 28 ~~dLa~~A~~~al~~agi~p~~ID~vi~G~~~~~~~~~~~~~r~a~~~~Gl~~~~pa~~Vn-~aCaSg~~Ai~~A~~~I~ 106 (402)
T PRK08242 28 PVRLAAGLLEALRDRNGLDTAAVDDVVLGCVTPVGDQGADIARTAVLAAGLPETVPGVQIN-RFCASGLEAVNLAAAKVR 106 (402)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEecCCCccccccHHHHHHHHcCCCCCCCeEEEc-chhhhHHHHHHHHHHHHH
Confidence 7899999999999999999999999999865 43332 34566677888997679999999 799999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+||+++|.+|+
T Consensus 107 sG~~d~vLv~G~E~mS~ 123 (402)
T PRK08242 107 SGWDDLVIAGGVESMSR 123 (402)
T ss_pred cCCCCEEEEEEEEccCC
Confidence 99999999999999987
No 84
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=99.02 E-value=3e-08 Score=104.67 Aligned_cols=94 Identities=15% Similarity=0.230 Sum_probs=79.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC--CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL--FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~--~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+.+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+..+.-.-|++.+++++.++ .+|++|+.|+..|.+.++
T Consensus 26 ~~~L~~~a~~~al~~a~l~~~~Id~vi~G~~~~~~~~~~~~ar~~~l~~gl~~~vP~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (390)
T PRK06504 26 PADLAAQVLDALVDRSGADPALIEDVIMGCVSQVGEQATNVARNAVLASKLPESVPGTSID-RQCGSSQQALHFAAQAVM 104 (390)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-chhhHHHHHHHHHHHHHH
Confidence 68999999999999999999999999998643 211244555544455886689999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+||++.|.+|.
T Consensus 105 sG~~dvvLagGvEsmS~ 121 (390)
T PRK06504 105 SGTMDIVIAAGVESMTR 121 (390)
T ss_pred CCCCCEEEEeeeeecCC
Confidence 99999999999998874
No 85
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.94 E-value=6.8e-08 Score=102.56 Aligned_cols=189 Identities=13% Similarity=0.161 Sum_probs=112.0
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEecc-CCCcCCCCCCcHHHHH--HHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVP-DAMHYLPPRPSMAAAR--EEA 174 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~-~~~~~~~~~~~~~~~~--~ea 174 (504)
++|.|.|+|+..|- -.+.+++.+.+.. +. +. ++...+.....++..+.... ++ ...+....-++.| ...
T Consensus 2 ~~VvITG~g~vtp~---G~~~~~~~~~L~~-g~-s~--i~~~~~~~~~~~~~~~~~~~v~~-~~~~~~~~~~~~r~~~~~ 73 (405)
T PRK09116 2 RRVVVTGMGGVTAL---GEDWQTIAARLKA-GR-NA--VRRMPEWDRYDGLNTRLAAPIDD-FELPAHYTRKKIRSMGRV 73 (405)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CC-CC--EEeCCchhhccCCCCceEEEecC-cChhHhcCHHHHhhCCHH
Confidence 46999999999998 3677888876643 11 00 00000000001222211110 10 0000000001111 125
Q ss_pred HHHHHHHHHHHHHhCCCCC------CCcCEEEEeecCC-----------------C--------CCCc-hHHHHHHHcCC
Q 010687 175 EQVMFGALDNLFANTNVKP------KDIGILVVNCSLF-----------------N--------PTPS-LSAMIVNKYKL 222 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~------~dId~LI~~~s~~-----------------~--------~~Ps-~a~~I~~~lGl 222 (504)
..++..|++++|+++|++. +++++++-++... . .+|+ .+..|...||+
T Consensus 74 ~~~al~aa~~Al~dAGl~~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 153 (405)
T PRK09116 74 SLMATRASELALEDAGLLGDPILTDGRMGIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGL 153 (405)
T ss_pred HHHHHHHHHHHHHHcCCCCccccCCCcEEEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCC
Confidence 6789999999999999842 3344443322110 0 1232 56789999999
Q ss_pred CCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----C----------------cCCCCcCccccc
Q 010687 223 RGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN----W----------------YFGNKKSMLIPN 282 (504)
Q Consensus 223 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~----~----------------~~~~dr~~l~~~ 282 (504)
+. +++-++ .+|++++.||..|.++|+.|..+.+||.++|.++.. | ..+-|+.. ..
T Consensus 154 ~G--p~~ti~-~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~f~~l~~~~~~~~~~~~~~rPfd~~~--~G 228 (405)
T PRK09116 154 KG--RVIPTS-SACTSGSQGIGYAYEAIKYGYQTVMLAGGAEELCPTEAAVFDTLFATSTRNDAPELTPRPFDANR--DG 228 (405)
T ss_pred CC--Cccccc-chhhhHHHHHHHHHHHHHcCCCCEEEEecchhcChHHHHHHHHhhhhccCCCCCCCCCCCCcCCC--CC
Confidence 84 788899 599999999999999999999999999999975420 0 00111110 24
Q ss_pred cccccccEEEEEecccc
Q 010687 283 CLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 283 ~lfgDGAaA~LLs~~~~ 299 (504)
.+.|+||+++||++.+.
T Consensus 229 ~v~gEGa~~~vLe~~~~ 245 (405)
T PRK09116 229 LVIGEGAGTLVLEELEH 245 (405)
T ss_pred EeeeccEEEEEEccHHH
Confidence 67899999999997543
No 86
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=98.94 E-value=3.7e-09 Score=112.83 Aligned_cols=94 Identities=14% Similarity=0.313 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+|+++. +....+..+..++..+|++.++++++++ .+|++++.++..|.+++++
T Consensus 27 ~~~L~~~A~~~Al~dAgl~~~dID~vi~g~~~~~~~~~~~a~~v~~~lGl~~~~p~~~v~-~~CaSg~~al~~A~~~I~s 105 (426)
T PRK08170 27 ASDLAVAAGRALLNRQPFAPDDLDEVILGCAMPSPDEANIARVVALRLGCGEKVPAWTVQ-RNCASGMQALDSAAANIAL 105 (426)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCCCCcChHHHHHHHHhCcCCCceeeecc-chhhHHHHHHHHHHHHHHC
Confidence 6889999999999999999999999998754 3333467778899999997568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+++||+++|.+|.
T Consensus 106 G~~d~vLv~G~E~ms~ 121 (426)
T PRK08170 106 GRADLVLAGGVEAMSH 121 (426)
T ss_pred CCCCEEEEEEEecccC
Confidence 9999999999998875
No 87
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=98.93 E-value=5.7e-08 Score=102.37 Aligned_cols=93 Identities=14% Similarity=0.238 Sum_probs=75.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCC-CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~~-~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++++|||.+|+.+.. ... .+..+..+.-..|++..+.++.++ .+|+++..++..|.+.|+
T Consensus 26 ~~~L~~~a~~~al~dagl~~~~ID~vv~g~~~~~~~~~~~~~~~~~l~~gl~~~~p~~~v~-~acaSg~~Av~~Aa~~I~ 104 (382)
T PRK07801 26 PADLGAHVLKGLVDRTGIDPAAVDDVIFGCVDTIGPQAGNIARTSWLAAGLPEEVPGVTVD-RQCGSSQQAIHFAAQAVM 104 (382)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEEeeccCCcccccHHHHHHHHcCCCCCCceeeec-chhhhHHHHHHHHHHHHH
Confidence 67899999999999999999999999987542 111 233344444457776557889999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 010687 252 VHRNTYAVVVSTENIT 267 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S 267 (504)
+|..+.+||++.|.+|
T Consensus 105 sG~~d~vLv~G~e~ms 120 (382)
T PRK07801 105 SGTQDLVVAGGVQNMS 120 (382)
T ss_pred CCCCCEEEEcchhhhc
Confidence 9999999999898553
No 88
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.91 E-value=2.4e-07 Score=97.56 Aligned_cols=245 Identities=14% Similarity=0.200 Sum_probs=144.0
Q ss_pred HHHHHHHHHHHhCCCCC--CCcCEEEEeecCC--------------------C--------CCC-chHHHHHHHcCCCCc
Q 010687 177 VMFGALDNLFANTNVKP--KDIGILVVNCSLF--------------------N--------PTP-SLSAMIVNKYKLRGN 225 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~--~dId~LI~~~s~~--------------------~--------~~P-s~a~~I~~~lGl~~~ 225 (504)
++..|++++|+++|+++ +++++++-.+... . ..| ..+..|...+|++.
T Consensus 59 ~~~~a~~~Al~dagl~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~G- 137 (381)
T PRK05952 59 LTKTVVTAALKDAGLTPPLTDCGVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQG- 137 (381)
T ss_pred HHHHHHHHHHHhcCCCCCCCCEEEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCC-
Confidence 56689999999999964 5566555332110 0 122 24677899999984
Q ss_pred ceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CcCC----C-----c-----CCCCcCccccccccccccE
Q 010687 226 IRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTEN-ITQN----W-----Y-----FGNKKSMLIPNCLFRVGGS 290 (504)
Q Consensus 226 ~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~-~S~~----~-----~-----~~~dr~~l~~~~lfgDGAa 290 (504)
+++.+. .+|++++.||..|.++|+.+..+.+||.++|. ++.. + . .+-|+.. ...++||||+
T Consensus 138 -p~~ti~-~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~ls~~~~rPfd~~r--~G~v~gEGaa 213 (381)
T PRK05952 138 -PVLAPM-AACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKTGAYPFDRQR--EGLVLGEGGA 213 (381)
T ss_pred -cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCcCCCCCCCCCCCC--CCccccccEE
Confidence 788899 59999999999999999999999999999996 4321 0 0 0111110 2468999999
Q ss_pred EEEEeccccccccccceEe-eEEEEeecCCCccccceeecccCCCCcccccchhHHHHHHHHHhhhhhhcCCCccchhhH
Q 010687 291 AVLLSNKAKDRRRAKYKLV-HVVRTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQ 369 (504)
Q Consensus 291 A~LLs~~~~~~~~~~~~l~-~~v~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~~gp~vlp~se~ 369 (504)
++||++.+...++. -++. .+......+|+... ..+ +.+...
T Consensus 214 ~lvLe~~~~A~~rg-~~i~a~I~g~~~~~d~~~~---~~~-----------~~~~~~----------------------- 255 (381)
T PRK05952 214 ILVLESAELAQKRG-AKIYGQILGFGLTCDAYHM---SAP-----------EPDGKS----------------------- 255 (381)
T ss_pred EEEEeeHHHHHhCC-CceEEEEEEEEecCCCCCC---CCC-----------CCCHHH-----------------------
Confidence 99999765322211 1111 11112222232110 000 000000
Q ss_pred HHHHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHH-----HHHHcCCCchhhhhhhhccccccccccchHH
Q 010687 370 LLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDE-----LEKNLQLLPEHVEASRMTLHRFGNTSSSSIW 443 (504)
Q Consensus 370 ~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~-----i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~ 443 (504)
.....++.++ ..+.+ +|||++..|..+...-|. +.+.++ +++. --.+=..+||+.+|+-.
T Consensus 256 ----~~~ai~~Al~~agi~p------~dId~i~~hgtgt~~~D~~E~~al~~~fg---~~~~-v~s~K~~~GH~~~AaG~ 321 (381)
T PRK05952 256 ----AIAAIQQCLARSGLTP------EDIDYIHAHGTATRLNDQREANLIQALFP---HRVA-VSSTKGATGHTLGASGA 321 (381)
T ss_pred ----HHHHHHHHHHHhCCCH------HHeeEEEccCCCCCCCcHHHHHHHHHHcC---CCCe-eecchhhhccChHHHHH
Confidence 0011133443 23433 899999999888765444 444454 1221 01233459999999977
Q ss_pred HHHHHH---HHcCCCCC---------------------CCEEEEEeechhHHhhheeeE
Q 010687 444 YELAYT---EAKGRMRR---------------------GNRVWQIAFGSGFKCNSAVWQ 478 (504)
Q Consensus 444 ~~L~~~---~~~g~i~~---------------------Gd~Vlli~fG~G~~~~sav~r 478 (504)
+++... +++|.+.| =++++..+||.|-.-.++|++
T Consensus 322 ~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~v~~~~~~~~~~~l~~s~gfGG~na~lvl~ 380 (381)
T PRK05952 322 LGVAFSLLALRHQQLPPCVGLQEPEFDLNFVRQAQQSPLQNVLCLSFGFGGQNAAIALG 380 (381)
T ss_pred HHHHHHHHHHhcCccCCCCCCCCCCCCCCcCCCcccCCCCEEEEeeecCCCeeEEEEEe
Confidence 777654 44444432 145677888877766666654
No 89
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=98.91 E-value=3.1e-07 Score=98.49 Aligned_cols=121 Identities=12% Similarity=0.063 Sum_probs=86.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCC-----CcCEEEEeecC-CC-----------------C--------CC-chHHHHHHHcC
Q 010687 174 AEQVMFGALDNLFANTNVKPK-----DIGILVVNCSL-FN-----------------P--------TP-SLSAMIVNKYK 221 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~-----dId~LI~~~s~-~~-----------------~--------~P-s~a~~I~~~lG 221 (504)
...++..|+.++|+++|+++. +...++++++. .. . .+ ..+..|...+|
T Consensus 93 ~~~~~~~aa~~Al~dAg~~~~~~~~~~~~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~g 172 (437)
T PLN02836 93 FIGYALCAADEALSDARWLPSEDEAKERTGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYG 172 (437)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCCcCEEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhC
Confidence 567899999999999998542 34456665431 10 0 11 24567999999
Q ss_pred CCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------------------CcCCCCcCcc
Q 010687 222 LRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN----------------------WYFGNKKSML 279 (504)
Q Consensus 222 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~----------------------~~~~~dr~~l 279 (504)
++ -.++-++ .+|++++.||..|.++|++|..+.+||.++|..... ...+-|+..
T Consensus 173 l~--Gp~~tv~-~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~pfd~~~- 248 (437)
T PLN02836 173 FQ--GPNHAAV-TACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDR- 248 (437)
T ss_pred CC--Cceecee-ChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHhhhhhcccCCCcccccCCcccCC-
Confidence 87 4788899 599999999999999999999999999998863210 000111110
Q ss_pred ccccccccccEEEEEecccc
Q 010687 280 IPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 280 ~~~~lfgDGAaA~LLs~~~~ 299 (504)
..++.||||+|+||++.+.
T Consensus 249 -~G~~~gEGaaalVLe~~~~ 267 (437)
T PLN02836 249 -DGFVIGEGAGVLVLEELEH 267 (437)
T ss_pred -CCeeeecCEEEEEEeeHHH
Confidence 2577899999999997654
No 90
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=98.90 E-value=6e-09 Score=110.14 Aligned_cols=93 Identities=11% Similarity=0.097 Sum_probs=81.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHH-HHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAM-IVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~-I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+.+|+.+|++++|+++|++|+|||.+|++++ ++...+..+.. +++.+|+. ++++++++ .+|++++.++..|.++++
T Consensus 23 ~~el~~~a~~~Al~~agl~p~dID~vi~g~~~~~~~g~~~~~~~~~~~lg~~-~~p~~~V~-~~Casg~~al~~A~~~I~ 100 (393)
T cd00826 23 AHEAGAKAIAAALEPAGVAAGAVEEACLGQVLGAGEGQNCAQQAAMHAGGLQ-EAPAIGMN-NLCGSGLRALALAMQLIA 100 (393)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEccCCcccCcHHHHHHHHcCCCC-CCcEEEec-chhHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999998875 44434555553 67778876 78999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+||+++|.+|.
T Consensus 101 sG~~~~vlv~g~e~~s~ 117 (393)
T cd00826 101 GGDANCILAGGFEKMET 117 (393)
T ss_pred CCCCCEEEEEeeecccc
Confidence 99999999999999875
No 91
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.87 E-value=8.2e-07 Score=93.91 Aligned_cols=83 Identities=14% Similarity=0.165 Sum_probs=65.0
Q ss_pred CchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC--------------CcCCCC
Q 010687 210 PSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN--------------WYFGNK 275 (504)
Q Consensus 210 Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~--------------~~~~~d 275 (504)
+..+..|+..||++. .++.+. .||++++.||..|.++|++|..+.+||+++|..+.. ...+-|
T Consensus 137 ~~~a~~ia~~lgl~G--p~~~i~-~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~~~~~~~~~~~~~~~l~~~~~~Pfd 213 (392)
T PRK09185 137 GSLADFLRAYLGLSG--PAYTIS-TACSSSAKVFASARRLLEAGLCDAAIVGGVDSLCRLTLNGFNSLESLSPQPCRPFS 213 (392)
T ss_pred cHHHHHHHHHhCCCC--Cccccc-ChhHHHHHHHHHHHHHHHcCCCCEEEEeeccccChHHHHHHHhccccCCCccCCCc
Confidence 357788999999973 788899 599999999999999999999999999999965431 001111
Q ss_pred cCccccccccccccEEEEEecc
Q 010687 276 KSMLIPNCLFRVGGSAVLLSNK 297 (504)
Q Consensus 276 r~~l~~~~lfgDGAaA~LLs~~ 297 (504)
+.. ...++||||+++||++.
T Consensus 214 ~~~--~G~~~gEGaa~vVLe~~ 233 (392)
T PRK09185 214 ANR--DGINIGEAAAFFLLERE 233 (392)
T ss_pred CCC--CccceeceEEEEEEEEc
Confidence 110 24689999999999987
No 92
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=98.84 E-value=8.5e-07 Score=97.17 Aligned_cols=120 Identities=13% Similarity=0.127 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCC--------CcCEEEEeecC-C------------------CC------CC-chHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPK--------DIGILVVNCSL-F------------------NP------TP-SLSAMIVNK 219 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~--------dId~LI~~~s~-~------------------~~------~P-s~a~~I~~~ 219 (504)
...++..|++++|+++|++++ .++ +++.++. . .+ .+ ..+.+|+..
T Consensus 199 ~~~~al~Aa~eAL~dAGl~~~~~~~~~~~r~G-V~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~ 277 (540)
T PLN02787 199 FMLYLLTAGKKALADGGITEDVMKELDKTKCG-VLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMD 277 (540)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccccCCCceE-EEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHH
Confidence 457889999999999998764 233 4444321 1 00 11 235678999
Q ss_pred cCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCC---------------------cCCCCcCc
Q 010687 220 YKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNW---------------------YFGNKKSM 278 (504)
Q Consensus 220 lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~---------------------~~~~dr~~ 278 (504)
+|++ -+++.++ .+|++++.||..|.++|+.|..+.+||.++|.....+ ..+-|+..
T Consensus 278 ~gl~--Gp~~tis-tACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~~aLS~~~~~p~~~~rPFD~~r 354 (540)
T PLN02787 278 LGWM--GPNYSIS-TACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVACRALSQRNDDPTKASRPWDMNR 354 (540)
T ss_pred hCCC--CCccccc-cccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHHHHhhccCCCcccccCCcccCC
Confidence 9997 4788899 5999999999999999999999999999999631100 00111110
Q ss_pred cccccccccccEEEEEecccc
Q 010687 279 LIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 279 l~~~~lfgDGAaA~LLs~~~~ 299 (504)
...++|+||+++||++.+.
T Consensus 355 --dGfv~GEGAa~lVLE~~e~ 373 (540)
T PLN02787 355 --DGFVMGEGAGVLLLEELEH 373 (540)
T ss_pred --CCcccccceEEEEEeeHHH
Confidence 2467899999999997543
No 93
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....
Probab=98.83 E-value=1.4e-08 Score=101.81 Aligned_cols=95 Identities=14% Similarity=0.229 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
+.+|+.+|++++|++++++|++||.+++.|. +....+..+..++-..|++..++++.++ +.|++|+.|+..|...+++
T Consensus 26 ~~~L~~~a~~~al~~~~i~~~~Id~v~~G~~~~~~~g~~~ar~~~l~aGl~~~vp~~~V~-~~CaSG~~Av~~a~~~I~s 104 (264)
T PF00108_consen 26 PEDLAAEAVKAALERAGIDPEDIDAVIVGNVLQEGEGQNIARQAALAAGLPESVPATTVN-RACASGLQAVHLAAMAIAS 104 (264)
T ss_dssp HHHHHHHHHHHHHHHHTSHGGGEEEEEEE-SSSCTTTCHHHHHHHHHTTS-TTSEEEEEE--GGGHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhcccchhhhhhcCcccccccccchhhhhhhhhhcccccccceeeeh-hhhhHHHHHHHHhhhhhcC
Confidence 7899999999999999999999999999975 4344677888888899998889999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcCC
Q 010687 253 HRNTYAVVVSTENITQN 269 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~~ 269 (504)
|..+.+|+++.|.+|..
T Consensus 105 G~~dvvlagGvE~mS~~ 121 (264)
T PF00108_consen 105 GEADVVLAGGVESMSRV 121 (264)
T ss_dssp TS-SEEEEEEEEETTTS
T ss_pred CCccEEEEecccccccc
Confidence 99999999999999873
No 94
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=98.83 E-value=2.7e-07 Score=98.54 Aligned_cols=251 Identities=14% Similarity=0.085 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHhCCCC-CCCcCE----EEEeecCCC------------------C--------CC-chHHHHHHHcC
Q 010687 174 AEQVMFGALDNLFANTNVK-PKDIGI----LVVNCSLFN------------------P--------TP-SLSAMIVNKYK 221 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~-~~dId~----LI~~~s~~~------------------~--------~P-s~a~~I~~~lG 221 (504)
..+++..|++++|+++|++ +++++. +++.++... . .+ ..+..|...+|
T Consensus 77 ~~~l~~~aa~~Al~dAGl~~~~~~~~~~~Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~ 156 (421)
T PTZ00050 77 ATHFAMAAAREALADAKLDILSEKDQERIGVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHK 156 (421)
T ss_pred HHHHHHHHHHHHHHHcCCCcccccCcccEEEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhC
Confidence 5789999999999999998 666653 333322110 0 11 24567888899
Q ss_pred CCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC---------------Cc-------CCCCcCcc
Q 010687 222 LRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN---------------WY-------FGNKKSML 279 (504)
Q Consensus 222 l~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~---------------~~-------~~~dr~~l 279 (504)
++ -+++.+. .+|++++.||..|.++|++|..+.+||.++|..... +. .+-|+..
T Consensus 157 l~--Gp~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f~~~~~l~~~~~~~p~~~~~pfd~~~- 232 (421)
T PTZ00050 157 LK--GPSGSAV-TACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDR- 232 (421)
T ss_pred CC--Ccccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHHHhhhccccCcCCCCCccCCCCcCCC-
Confidence 97 4788889 599999999999999999999999999999973210 00 0001110
Q ss_pred ccccccccccEEEEEeccccccccccceEeeEE-EEeecCCCccccceeecccCCCCcccccchhHHHHHHHHHhhhhhh
Q 010687 280 IPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVV-RTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITT 358 (504)
Q Consensus 280 ~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v-~t~~~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ni~~ 358 (504)
...+.||||+|+||++.+...++ +-.+...+ ......|+.. ...+. .+.
T Consensus 233 -~G~~~gEGAaalvLe~~~~A~~~-g~~i~a~i~g~~~~~d~~~---~~~p~-----------~~~-------------- 282 (421)
T PTZ00050 233 -AGFVMGEGAGILVLEELEHALRR-GAKIYAEIRGYGSSSDAHH---ITAPH-----------PDG-------------- 282 (421)
T ss_pred -CCEeeccceEEEEEeeHHHHHHC-CCeEEEEEEEEEEcCCCCC---CCCCC-----------CCh--------------
Confidence 24678999999999986543221 11222112 1111222110 01110 000
Q ss_pred cCCCccchhhHHHHHHHHHHHHHHHh--hccCCccCcccccCEEEEcCCCHHHH-----HHHHHHcCCCc-hhhhhhhhc
Q 010687 359 LGPLVLPISEQLLFFATLVAKKFSNA--KVKPYIPDFKLAFDHFCIHAGGRAVI-----DELEKNLQLLP-EHVEASRMT 430 (504)
Q Consensus 359 ~gp~vlp~se~~~~~~~~~~~~vl~~--~~~~~~p~~~~did~~~~Hq~g~~vl-----~~i~~~Lgl~~-e~~~~S~~~ 430 (504)
+. .....++.++. .+.+ +|||++.+|..+...- +.+.+.++-.. +.+.- -.+
T Consensus 283 ---------~~----~~~ai~~Al~~~Agi~~------~dId~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v-~s~ 342 (421)
T PTZ00050 283 ---------RG----ARRCMENALKDGANINI------NDVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYV-SST 342 (421)
T ss_pred ---------HH----HHHHHHHHHHhccCCCh------hhCCEEECCCccCCCCCHHHHHHHHHHhccccCCCceE-ECc
Confidence 00 00012344433 3432 8999999998887443 34555555321 22210 122
Q ss_pred cccccccccchHHHHHHHH---HHcCCCCC--------------------------CCEEEEEeechhHHhhheeeE
Q 010687 431 LHRFGNTSSSSIWYELAYT---EAKGRMRR--------------------------GNRVWQIAFGSGFKCNSAVWQ 478 (504)
Q Consensus 431 l~r~GNtsSasi~~~L~~~---~~~g~i~~--------------------------Gd~Vlli~fG~G~~~~sav~r 478 (504)
=..+||+.+|+=.++|... +++|.+.+ =.+++..+||-|-.-.++|++
T Consensus 343 K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~nsfgfgG~n~~lvl~ 419 (421)
T PTZ00050 343 KGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQSIDAVLSTSFGFGGVNTALLFT 419 (421)
T ss_pred cccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCCccccCCcccCcCCCCCEEEEeeecCCCeeEEEEEe
Confidence 3358999998887777654 33433211 146777888888777777776
No 95
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=98.83 E-value=7.1e-07 Score=94.82 Aligned_cols=187 Identities=11% Similarity=0.178 Sum_probs=112.7
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceEeccCCCcC-CCCCCcHHHHHHHH
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGD--FDESSLEFQRKILERSGLGEETYVPDAMHY-LPPRPSMAAAREEA 174 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~-~~~~~~~~~~~~ea 174 (504)
++|.|.|+|+.-|- -.+.+++.+.+.. |. +.+- . -++..+...+.....+... ..............
T Consensus 2 ~rVvITG~G~vsp~---G~~~~~~w~~l~~-G~sgi~~~-----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~r~ 71 (406)
T PRK07967 2 RRVVITGLGIVSSI---GNNQQEVLASLRE-GRSGITFS-----P-EFAEMGMRSQVWGNVKLDPTGLIDRKVMRFMGDA 71 (406)
T ss_pred CcEEEEcceEECCC---CCCHHHHHHHHHc-CCCceeEC-----C-cccccCCCCceEEEcCCChhhcCCHHHhhcCCHH
Confidence 57999999999988 3677888876642 10 0000 0 0111222222211110000 00000000111125
Q ss_pred HHHHHHHHHHHHHhCCCCCCC-----cCEEEEeecCC------------------C--------CCC-chHHHHHHHcCC
Q 010687 175 EQVMFGALDNLFANTNVKPKD-----IGILVVNCSLF------------------N--------PTP-SLSAMIVNKYKL 222 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~d-----Id~LI~~~s~~------------------~--------~~P-s~a~~I~~~lGl 222 (504)
..++..|++++|+++|+++++ +++++-.+... . ..| ..+..|...||+
T Consensus 72 ~~~a~~aa~~Al~dAGl~~~~~~~~rvGv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l 151 (406)
T PRK07967 72 SAYAYLAMEQAIADAGLSEEQVSNPRTGLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKI 151 (406)
T ss_pred HHHHHHHHHHHHHHcCCCCccCCCCCEEEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCC
Confidence 678899999999999987543 44443322111 0 111 256779999999
Q ss_pred CCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCCc---------------------CCCCcCcccc
Q 010687 223 RGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWY---------------------FGNKKSMLIP 281 (504)
Q Consensus 223 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~---------------------~~~dr~~l~~ 281 (504)
+. +++.++ .+|++++.||..|.++|+.|..+.+||.++|..+..++ .+-|+.. .
T Consensus 152 ~G--p~~tvs-~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~ 226 (406)
T PRK07967 152 KG--VNYSIS-SACATSAHCIGNAVEQIQLGKQDIVFAGGGEELDWEMSCLFDAMGALSTKYNDTPEKASRAYDANR--D 226 (406)
T ss_pred CC--Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEeeecccChHHHHHHHHhhhhccCCCCCCCcCCcCCcCCC--C
Confidence 84 778889 69999999999999999999999999999987543110 0111110 2
Q ss_pred ccccccccEEEEEecccc
Q 010687 282 NCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 282 ~~lfgDGAaA~LLs~~~~ 299 (504)
..+.|+||+++||++.+.
T Consensus 227 G~v~gEGaa~lvLe~~~~ 244 (406)
T PRK07967 227 GFVIAGGGGVVVVEELEH 244 (406)
T ss_pred ceeeeceEEEEEEeeHHH
Confidence 467899999999997543
No 96
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=98.83 E-value=1.2e-08 Score=107.65 Aligned_cols=91 Identities=11% Similarity=0.064 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC--CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNP--TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~--~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++++|||.+|+++.++.. .+..+..+++.+|+. +.+++++. .||+++..++..|...++
T Consensus 29 ~~~L~~~A~~~Al~dagl~~~dID~~i~~~~~~~~~~~~~~a~~l~~~lG~~-~~~~~~V~-~~gasG~~al~~A~~~I~ 106 (392)
T PRK06065 29 PQELAWEAASKALDEAGLELKDIDCVVIGSAPDAFDGVHMKGEYLSHGSGGI-RKPVSRVY-VGGATGVMTAIAGWYHVA 106 (392)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCcccccccHHHHHHHHcCCC-CCCeEEEe-cCchhHHHHHHHHHHHHh
Confidence 57899999999999999999999999987643322 466788899999997 47899999 588888999999999999
Q ss_pred cCCCCeEEEEEeccC
Q 010687 252 VHRNTYAVVVSTENI 266 (504)
Q Consensus 252 a~~~~~aLVVs~E~~ 266 (504)
+|..++||||++|.+
T Consensus 107 sG~ad~vLVvg~e~~ 121 (392)
T PRK06065 107 SGLCQKVLAVAEEKM 121 (392)
T ss_pred CCCCCEEEEEEeecc
Confidence 999999999999974
No 97
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=98.82 E-value=7.7e-07 Score=94.39 Aligned_cols=120 Identities=14% Similarity=0.081 Sum_probs=85.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----EEEEeecC-CC-----------------CC--------C-chHHHHHHHcCC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIG----ILVVNCSL-FN-----------------PT--------P-SLSAMIVNKYKL 222 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId----~LI~~~s~-~~-----------------~~--------P-s~a~~I~~~lGl 222 (504)
...++..|+.++|+++|+++++++ .+++.++. .. .. + ..+..|...+|+
T Consensus 71 ~~~~~l~aa~eAl~dAGl~~~~~~~~r~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl 150 (399)
T cd00832 71 MTRLALAAADWALADAGVDPAALPPYDMGVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGM 150 (399)
T ss_pred HHHHHHHHHHHHHHHcCCCccccCCCceEEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCC
Confidence 567899999999999999876543 23444321 10 01 1 245789999999
Q ss_pred CCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC----------CcC----------CCCcCccccc
Q 010687 223 RGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN----------WYF----------GNKKSMLIPN 282 (504)
Q Consensus 223 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~----------~~~----------~~dr~~l~~~ 282 (504)
+ -+++-++ .+|++++.||..|.++|+.+. +.+||.++|..... ... +-|+.. ..
T Consensus 151 ~--Gp~~ti~-~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~~~ls~~~~p~~~~rPFd~~~--~G 224 (399)
T cd00832 151 R--GPSGVVV-AEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSSGRLSTSDDPARAYLPFDAAA--AG 224 (399)
T ss_pred C--CCccccc-chhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhccccCCCCCCCCCcCCCcCCC--CC
Confidence 7 4788888 599999999999999999999 99999999873210 000 011110 34
Q ss_pred cccccccEEEEEecccc
Q 010687 283 CLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 283 ~lfgDGAaA~LLs~~~~ 299 (504)
.+.|+||+++||++.+.
T Consensus 225 ~~~gEGa~~lvLe~~~~ 241 (399)
T cd00832 225 YVPGEGGAILVLEDAAA 241 (399)
T ss_pred EeeeceEEEEEEeeHHH
Confidence 68899999999998654
No 98
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=98.81 E-value=7.5e-07 Score=96.93 Aligned_cols=92 Identities=13% Similarity=0.075 Sum_probs=74.8
Q ss_pred HHHHHHHHHHHHHHhCCCC--CCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVK--PKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~--~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++ ++|||.+++..............+++++|+.+ ....... .||+++..++..|...++
T Consensus 27 ~~~L~~eA~~~Al~DAGl~~~~~dID~v~v~~~~~~~~~~~~~~la~~lGl~p-~~~~~~~-~GG~s~~~~v~~Aa~~Ia 104 (498)
T PRK08257 27 PVDLMAAAARAAAADAGADAVLEAIDSVAVVNQLSWRYRDPPGLLAERLGADP-ARTVYSP-VGGNSPQRLVNEAALRIA 104 (498)
T ss_pred HHHHHHHHHHHHHHhcCCCcCHHHCCEEEEeccccccccCHHHHHHHHcCCCC-cceeEec-CCCHHHHHHHHHHHHHHH
Confidence 5789999999999999999 99999998754321122234578999999974 4555555 688899999999999999
Q ss_pred cCCCCeEEEEEeccCc
Q 010687 252 VHRNTYAVVVSTENIT 267 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S 267 (504)
+|..+.|||+++|.++
T Consensus 105 sG~advVLv~G~E~~~ 120 (498)
T PRK08257 105 AGEADVALVAGAEAQS 120 (498)
T ss_pred CCCCCEEEEeeeeecc
Confidence 9999999999999753
No 99
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.78 E-value=1.6e-06 Score=92.42 Aligned_cols=186 Identities=10% Similarity=0.050 Sum_probs=113.5
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcCC--CChhhHHHHHHHHHHhCCCceE--eccCCCcCCCCCCcHHHHH--
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGD--FDESSLEFQRKILERSGLGEET--YVPDAMHYLPPRPSMAAAR-- 171 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~--~~~~~~~f~~~i~~~sGi~~r~--~~~~~~~~~~~~~~~~~~~-- 171 (504)
++|.|+|+|+..|- -.+.++|.+.+.. |. +.+-.. ...+..++..+. .++.+ +. +..+-++.+
T Consensus 12 ~~VvItGig~~sp~---g~~~~~~w~~L~~-G~s~i~~~~~----~~~~~~~~~~~~~g~i~~~-~d--~~~~~~~~~~~ 80 (418)
T PRK07910 12 PNVVVTGIAMTTAL---ATDAETTWKLLLD-GQSGIRTLDD----PFVEEFDLPVRIGGHLLEE-FD--HQLTRVELRRM 80 (418)
T ss_pred CCEEEEeeEEECCC---CCCHHHHHHHHHc-CCCeeEeCCh----hhhhccCCCcceEEEeccC-cc--ccCCHHHHhhc
Confidence 57999999999998 4678998887653 11 010000 001112222221 11111 10 001112222
Q ss_pred HHHHHHHHHHHHHHHHhCCC---CCCCcCEEEEeecCCC-------------------------CCC-chHHHHHHHcCC
Q 010687 172 EEAEQVMFGALDNLFANTNV---KPKDIGILVVNCSLFN-------------------------PTP-SLSAMIVNKYKL 222 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi---~~~dId~LI~~~s~~~-------------------------~~P-s~a~~I~~~lGl 222 (504)
.....++..|+.++|+++|+ +++++++++-.+.... ..| ..+..+...+|+
T Consensus 81 d~~~~~~l~aa~~AledAg~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~ 160 (418)
T PRK07910 81 SYLQRMSTVLGRRVWENAGSPEVDTNRLMVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHA 160 (418)
T ss_pred cHHHHHHHHHHHHHHHHcCCCCCCcccEEEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCC
Confidence 12556889999999999996 5566665543332110 012 245667888888
Q ss_pred CCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----C------cC-----------CCCcCccc
Q 010687 223 RGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN-----W------YF-----------GNKKSMLI 280 (504)
Q Consensus 223 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~-----~------~~-----------~~dr~~l~ 280 (504)
+. .++.+. .+|++++.||..|.++|+.|..+.++|.++|..... + .. +-|+..
T Consensus 161 ~G--~~~ti~-taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f~~~~~~ls~~~~~~~~~~rPFd~~~-- 235 (418)
T PRK07910 161 KA--GVITPV-SACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDR-- 235 (418)
T ss_pred CC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcCCccccCCCCCCCCcCCCcCCC--
Confidence 74 577788 599999999999999999999999999999974210 0 10 001110
Q ss_pred cccccccccEEEEEecccc
Q 010687 281 PNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 281 ~~~lfgDGAaA~LLs~~~~ 299 (504)
...++|+|++++||++.+.
T Consensus 236 ~G~v~gEGaa~vvLe~~~~ 254 (418)
T PRK07910 236 DGFVFGEGGALMVIETEEH 254 (418)
T ss_pred CCEeeeceEEEEEEeeHHH
Confidence 3578999999999997654
No 100
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=98.71 E-value=7.1e-08 Score=102.12 Aligned_cols=94 Identities=14% Similarity=0.193 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCEEEEeecC--CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANT-NVKPKDIGILVVNCSL--FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~a-gi~~~dId~LI~~~s~--~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
+.+|+..|++++|++. |++|++||.+|+.|.. ...-+..+.++....|++.+++++.++ +.|++++.|+.+|.+.+
T Consensus 26 ~~~L~~~a~~~al~r~a~i~~~~Id~vi~G~~~~~~~~g~~~ar~~~l~~Gl~~~vp~~tV~-~~CaSG~~Av~~A~~~I 104 (400)
T PRK13359 26 ADDLGAVPLKALVERNPDVDWAAIDDVIYGCANQAGEDNRNVARMSLLLAGLPHGVPGSTIN-RLCGSGMDAVGVAARAI 104 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEEe-ccchhHHHHHHHHHHHH
Confidence 6899999999999974 9999999999998753 222377888999999999779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+.+|+++.|.+|+
T Consensus 105 ~sG~~divlagGvEsmS~ 122 (400)
T PRK13359 105 KSGEAALMIAGGVESMSR 122 (400)
T ss_pred HcCCCCEEEEeeeeccCC
Confidence 999999999999999986
No 101
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=98.70 E-value=7.6e-08 Score=102.20 Aligned_cols=93 Identities=10% Similarity=0.192 Sum_probs=81.5
Q ss_pred HHHHHHHHHHHHHHhC-CCCCCCcCEEEEeec-CC-CCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANT-NVKPKDIGILVVNCS-LF-NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~a-gi~~~dId~LI~~~s-~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
..+|+.+|++++|+++ |++|+|||.+|+++. ++ ...+..+..++..+|++ +++++.++ .+|+++..++..|.+.+
T Consensus 27 ~~eL~~~A~~~AL~da~gl~~~dID~vv~g~~~~~~~~g~~~~~~~a~~lGl~-~~p~~~v~-~~caSG~~av~~Aa~~I 104 (406)
T PRK07851 27 PDDLAAQMVRAALDKVPALDPTDIDDLMLGCGLPGGEQGFNMARVVAVLLGYD-FLPGTTVN-RYCSSSLQTTRMAFHAI 104 (406)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEcccccccccCCHHHHHHHHcCCC-CCCeeeee-ccchhHHHHHHHHHHHH
Confidence 6889999999999996 999999999998753 22 22356678899999996 58999999 59999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+.+||++.|.+|.
T Consensus 105 ~sG~~d~vLv~G~e~~s~ 122 (406)
T PRK07851 105 KAGEGDVFISAGVETVSR 122 (406)
T ss_pred HCCCCCEEEEeeEEeccc
Confidence 999999999999998775
No 102
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.69 E-value=5.8e-08 Score=103.76 Aligned_cols=94 Identities=13% Similarity=0.189 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLF-NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++|++||.+|+++... ...+.++.+++...|++..++++.++ ++|++++.|+..|...+++
T Consensus 29 ~~eL~~~a~~~al~~agl~~~~ID~vi~G~~~~~~~~~~~ar~~a~~aGl~~~~P~~tV~-~aCaSG~~Ai~~Aa~~I~s 107 (428)
T PRK08963 29 AVDLGKMVVGELLARSEIDPELIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVS-RACATSFQAVANVAESIMA 107 (428)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEeccCCCCCccHHHHHHHHHCCCCCCCcceeeh-hhhHHHHHHHHHHHHHHHC
Confidence 688999999999999999999999999987532 22355677799999998669999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||++.|.+|.
T Consensus 108 G~~dvvLvgG~Esms~ 123 (428)
T PRK08963 108 GTIDIGIAGGADSSSV 123 (428)
T ss_pred CCCCEEEEecccccCC
Confidence 9999999999999885
No 103
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=98.69 E-value=7.9e-08 Score=101.53 Aligned_cols=93 Identities=17% Similarity=0.189 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CC--CCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FN--PTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~--~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
..+|+.+|++++|+++|++++|||.++++++. .. ..+..+..+...+|++ .+++++++ ++|++++.||.+|.+++
T Consensus 22 ~~eL~~eA~~~AL~dAgl~~~dId~vi~g~~~~~~~~~~~~~~~~~~~~~gl~-~~p~~~v~-~~CaSg~~Al~~A~~~I 99 (389)
T PRK07516 22 LESLIVRVAREALAHAGIAAGDVDGIFLGHFNAGFSPQDFPASLVLQADPALR-FKPATRVE-NACATGSAAVYAALDAI 99 (389)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEEecCCccccccchhHHHHHhcCCC-CCceeeec-cccHHHHHHHHHHHHHH
Confidence 57899999999999999999999999987542 21 1111122334456776 68899999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+++||+++|.+|.
T Consensus 100 ~sG~~d~vLvvg~e~~s~ 117 (389)
T PRK07516 100 EAGRARIVLVVGAEKMTA 117 (389)
T ss_pred HCCCCCEEEEEEehhhcc
Confidence 999999999999998753
No 104
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=98.67 E-value=9.5e-06 Score=86.00 Aligned_cols=187 Identities=14% Similarity=0.080 Sum_probs=112.5
Q ss_pred CCceEEEEeeeecCCCCceechHHHHHHhhh--cC-CCChhhHHHHHHHHHHhCC-CceEeccCCCcCCCCCCcHHHHHH
Q 010687 97 PRSIYLVDFSCYRPPSHLQVKFHQFMEHSRL--TG-DFDESSLEFQRKILERSGL-GEETYVPDAMHYLPPRPSMAAARE 172 (504)
Q Consensus 97 ~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~--~~-~~~~~~~~f~~~i~~~sGi-~~r~~~~~~~~~~~~~~~~~~~~~ 172 (504)
+++|.|.|+|+.-|- -.+.+++.+.+.. .+ .++... | .. ...+. ++- +... ..+. ........
T Consensus 5 ~~rVvITGiG~vsp~---G~~~e~~w~aL~~G~sg~~~~~~~--~--~~-~~~~~~~~~---~~~~-~~~~-~~~~r~~~ 71 (398)
T PRK06519 5 PNDVVITGIGLVSSL---GEGLDAHWNALSAGRPQPNVDTET--F--AP-YPVHPLPEI---DWSQ-QIPK-RGDQRQME 71 (398)
T ss_pred CCCEEEEcceEECCC---CCCHHHHHHHHHcCCCCCCCCccc--c--cC-cCccccccc---Chhh-cCCc-hhhhhccC
Confidence 568999999999987 4677888887643 11 111100 0 00 00000 000 0000 0011 00001112
Q ss_pred HHHHHHHHHHHHHHHhCCCCC-----CCcCEEEEeecCCC-----------------------------C--------CC
Q 010687 173 EAEQVMFGALDNLFANTNVKP-----KDIGILVVNCSLFN-----------------------------P--------TP 210 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~-----~dId~LI~~~s~~~-----------------------------~--------~P 210 (504)
....++..|++++|+++|+++ +++++++-++.... . .|
T Consensus 72 r~~~~a~~Aa~~Al~dAGl~~~~~~~~r~GvivGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 151 (398)
T PRK06519 72 TWQRLGTYAAGLALDDAGIKGNEELLSTMDMIVAAGGGERDIAVDTAILNEARKRNDRGVLLNERLMTELRPTLFLAQLS 151 (398)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCccceEEEEEeCCCchhHHHhhhhhhcccchhHHHHHHHhcCCCccChhhhhhhhh
Confidence 356789999999999999854 34555554432110 0 11
Q ss_pred -chHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccC-cC---------CCcC-----C-
Q 010687 211 -SLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENI-TQ---------NWYF-----G- 273 (504)
Q Consensus 211 -s~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~-S~---------~~~~-----~- 273 (504)
..+..|...+|++. +++.++ .+|++++.||..|.++|+.|..+.+||.++|.. +. .... +
T Consensus 152 n~~a~~is~~~gl~G--p~~ti~-~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~~~ls~~~~~p~ 228 (398)
T PRK06519 152 NLLAGNISIVHKVTG--SSRTFM-GEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKGGWAPV 228 (398)
T ss_pred hHHHHHHHHHhCCCC--cccccc-CCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHcCccCCCCCCch
Confidence 24667899999984 788899 599999999999999999999999999999862 21 0110 0
Q ss_pred CCcC-ccccccccccccEEEEEecccc
Q 010687 274 NKKS-MLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 274 ~dr~-~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
.|+. .--...+.|+||+++||++.+.
T Consensus 229 ~d~~~~~r~G~v~GEGAa~lvLE~~~~ 255 (398)
T PRK06519 229 WSRGGEDGGGFILGSGGAFLVLESREH 255 (398)
T ss_pred hccCccCCCCeeeeceEEEEEEeeHHH
Confidence 1110 0002467899999999998654
No 105
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=9.6e-08 Score=101.36 Aligned_cols=91 Identities=20% Similarity=0.175 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCC-----CchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPT-----PSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAK 247 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~-----Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~ 247 (504)
..+|+.+|++++|+++|++|+|||.+|++++ +++.. |+....++ .++. ++++++++ .+|++++.+|..|.
T Consensus 26 ~~eLa~eA~~~AL~dAgl~~~dID~vi~g~~~~~~~~~~~~~~~~~~~~~--~~~~-g~~~~~v~-~~Casg~~al~~Aa 101 (403)
T PRK06289 26 FADLTREVVDGTLAAAGVDADDIEVVHVGNFFGELFAGQGHLGAMPATVH--PALW-GVPASRHE-AACASGSVATLAAM 101 (403)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccccchHHHHHh--hcCC-CCceeecc-cccHHHHHHHHHHH
Confidence 5889999999999999999999999998754 43222 22222222 2443 46799999 59999999999999
Q ss_pred HHHhcCCCCeEEEEEeccCcC
Q 010687 248 DMLQVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 248 ~lL~a~~~~~aLVVs~E~~S~ 268 (504)
.++++|..++|||+++|..|.
T Consensus 102 ~~I~sG~~~~VLvvg~e~~s~ 122 (403)
T PRK06289 102 ADLRAGRYDVALVVGVELMKT 122 (403)
T ss_pred HHHHcCCCCEEEEEEEEecCC
Confidence 999999999999999998653
No 106
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=98.66 E-value=1.2e-07 Score=100.08 Aligned_cols=94 Identities=10% Similarity=0.198 Sum_probs=82.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCC-CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FNP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~~-~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+.+|+.+|++++|+++|++|++||.+++.+.. ... ....+..+....|++.+++++.++ ++|++|..|+..|.+.++
T Consensus 26 ~~eL~~~a~~~aL~~agi~~~~Id~v~~G~~~~~~~q~~~~ar~~~l~~Gl~~~~p~~tV~-~~CaSG~~A~~~A~~~I~ 104 (387)
T PRK07850 26 AAELLGAVQRAVLDRAGIDPGDVEQVIGGCVTQAGEQSNNITRTAWLHAGLPYHVGATTID-CQCGSAQQANHLVAGLIA 104 (387)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchHHHHHHHhCCCCCCCceEEEe-cccccHHHHHHHHHHHHH
Confidence 68999999999999999999999999998753 222 234566778889998679999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvla~G~E~mS~ 121 (387)
T PRK07850 105 AGAIDVGIACGVEAMSR 121 (387)
T ss_pred CCCCCEEEEEeEecCCC
Confidence 99999999999999986
No 107
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=98.64 E-value=1.3e-07 Score=100.28 Aligned_cols=94 Identities=14% Similarity=0.183 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecC--CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFAN-TNVKPKDIGILVVNCSL--FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~-agi~~~dId~LI~~~s~--~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
+.+|+.+|++++|++ +|++|++||.+|+.+.. ....+..+..++...|++.+++++.++ ++|++|..|+..|.+.+
T Consensus 26 ~~~L~~~a~~~al~~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~vP~~tV~-~aCaSG~~Ai~~A~~~I 104 (401)
T PRK09050 26 ADDLGAVPLKALMARNPGVDWEAVDDVIYGCANQAGEDNRNVARMSALLAGLPVSVPGTTIN-RLCGSGMDAVGTAARAI 104 (401)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccchHHHHHHHHcCCCCCCceEEEe-cccccHHHHHHHHHHHH
Confidence 689999999999996 69999999999998643 222356777899999998779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+.+|+++.|.+|.
T Consensus 105 ~sG~~dvvlagGvEsmS~ 122 (401)
T PRK09050 105 KAGEAELMIAGGVESMSR 122 (401)
T ss_pred HCCCCCEEEEeccccccc
Confidence 999999999999999986
No 108
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=98.62 E-value=1.8e-07 Score=99.16 Aligned_cols=94 Identities=11% Similarity=0.187 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CC-CCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LF-NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+.+|+.+|++++|+++|++|+|||.+++.+. +. ...+.++.+++...|++..++++.++ ++|++|..|+..|.+.++
T Consensus 26 ~~eL~~~a~~~al~~agi~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Glp~~~p~~tV~-~~CaSG~~Ai~~A~~~I~ 104 (401)
T PRK08131 26 PDDLAATVIRRLLEKSGFPGDDIEDVILGCTNQAGEDSRNVARNALLLAGLPVTVPGQTVN-RLCASGLAAVIDAARAIT 104 (401)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccccHHHHHHHhcCCCCCCceeeee-chhhhHHHHHHHHHHHHH
Confidence 6899999999999999999999999999864 22 22355677789999998779999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.+|+++.|.+|.
T Consensus 105 sG~~dvvlagG~Esms~ 121 (401)
T PRK08131 105 CGEGDLYLAGGVESMSR 121 (401)
T ss_pred CCCCCEEEEEEecCCCC
Confidence 99999999999999886
No 109
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=98.60 E-value=2.2e-07 Score=98.17 Aligned_cols=94 Identities=12% Similarity=0.227 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
+.+|+.+|++++|+++|++|+|||.+|+.+.. ....+..+..++..+|++.+++.+.++ .+|++++.++..|.+.+++
T Consensus 26 ~~~L~~~a~~~al~dagi~~~dID~vi~g~~~~~~~~~~~a~~~~~~~Gl~~~~p~~~v~-~~caSg~~av~~Aa~~I~s 104 (388)
T PRK06366 26 APQLGGAAIKAVIDDAKLDPALVQEVIMGNVIQAGVGQNPAGQAAYHAGLPFGVTKYTVN-VVCASGMLAVESAAREIML 104 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecCCCCccCcHHHHHHHHCCCCCCCcceeee-chhhHHHHHHHHHHHHHhc
Confidence 68899999999999999999999999987642 111334567789999998568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vla~G~e~ms~ 120 (388)
T PRK06366 105 GERDLVIAGGMENMSN 120 (388)
T ss_pred CCCCEEEEEeeEcccc
Confidence 9999999988898774
No 110
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=98.60 E-value=2e-07 Score=98.67 Aligned_cols=94 Identities=14% Similarity=0.200 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecC--CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFAN-TNVKPKDIGILVVNCSL--FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~-agi~~~dId~LI~~~s~--~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
+.+|+.+|++++|++ +|++|++||.+|+.+.. ....+..+..++..+|++.+++++.++ ++|++|..|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~a~i~~~~Id~v~~G~~~~~~~~~~~~ar~~~~~~Gl~~~~p~~~V~-~~CaSG~~Ai~~a~~~I 103 (400)
T TIGR02430 25 ADDLAAVPIKALLARNPQLDWAAIDDVIYGCANQAGEDNRNVARMAALLAGLPVSVPGTTVN-RLCGSGLDAIGMAARAI 103 (400)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHCCEEEEEeccccccccccHHHHHHHHcCCCCCCceEEee-chhhhHHHHHHHHHHHH
Confidence 689999999999996 69999999999998642 222366777899999998779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~~la~G~E~ms~ 121 (400)
T TIGR02430 104 KAGEADLLIAGGVESMSR 121 (400)
T ss_pred HCCCCCEEEEeccccccC
Confidence 999999999999999986
No 111
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=98.58 E-value=1.9e-07 Score=99.87 Aligned_cols=94 Identities=13% Similarity=0.178 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecC-CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSL-FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~-~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++|++||.+|+.+.. ....+.++..++-..|++..++++.++ ++|++|+.|+.+|.+.+++
T Consensus 31 ~~~L~~~a~~~al~~agl~~~~Id~vi~G~~~~~~~~~~~ar~~~l~aGl~~~~p~~~V~-~~CaSG~~A~~~a~~~I~s 109 (430)
T TIGR02446 31 AVDLGKMVVSELLARSEIDPKLIEQLVFGQVVQMPEAPNIAREIVLGTGMNVHTDAYSVT-RACATSFQSAVNVAESIMA 109 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccCcCccchHHHHHHHhCCCCCCCchhhhh-hhhhHHHHHHHHHHHHHHC
Confidence 68899999999999999999999999998643 222345666667778998679999999 7999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+|+++.|.+|.
T Consensus 110 G~~dvvla~G~E~mS~ 125 (430)
T TIGR02446 110 GAIDIGIAGGADSSSV 125 (430)
T ss_pred CCCCEEEEeeeEcccC
Confidence 9999999999999985
No 112
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....
Probab=98.57 E-value=4e-07 Score=89.83 Aligned_cols=120 Identities=19% Similarity=0.336 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCC------cCEEEEeecCCC-----------------C------CC-chHHHHHHHcCC
Q 010687 173 EAEQVMFGALDNLFANTNVKPKD------IGILVVNCSLFN-----------------P------TP-SLSAMIVNKYKL 222 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~d------Id~LI~~~s~~~-----------------~------~P-s~a~~I~~~lGl 222 (504)
....++..|+.++|+++|+++++ +++++-++..++ + .| ..+..|+..+|+
T Consensus 86 ~~~~~~l~aa~~Al~dAg~~~~~~~~~~r~gv~~G~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl 165 (254)
T PF00109_consen 86 RQSRLALAAAREALEDAGLDPDDLDGERRVGVFVGSSSGDYEFYRALDEDGETPRDVSPWFVPNTLPNSAAGRIAILFGL 165 (254)
T ss_dssp HHHHHHHHHHHHHHHHHTSTGGGHTGGGTEEEEEEESSSHHHHHHHHHHHTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB
T ss_pred hhhhHHHHHhhhhcccccccccccccccceeeccccccccccccccccccccccccccccccCcccccccccchhhhcCC
Confidence 36788999999999999999853 444443332210 1 22 256789999999
Q ss_pred CCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEec-cCcCC---------CcCCC------CcCccccccccc
Q 010687 223 RGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTE-NITQN---------WYFGN------KKSMLIPNCLFR 286 (504)
Q Consensus 223 ~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E-~~S~~---------~~~~~------dr~~l~~~~lfg 286 (504)
+. +++.++ .+|++++.||+.|.++|++|..+.+||.++| .++.. ....+ |+.. ...++|
T Consensus 166 ~G--~~~tv~-~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~~~~s~~~~~~pf~~~~--~G~v~g 240 (254)
T PF00109_consen 166 RG--PSYTVS-TACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSALGALSADGPCRPFDPFA--DGFVLG 240 (254)
T ss_dssp -S--SEEEEE--GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHTTBB-TTSGGGSTBTTB---SB-BB
T ss_pred CC--cccccc-ccccccccccchhccccccccccccccccccccccccccccccccccccccccccccCCCC--CCEEEE
Confidence 84 678888 5999999999999999999999999999999 44431 11111 1111 357899
Q ss_pred cccEEEEEecc
Q 010687 287 VGGSAVLLSNK 297 (504)
Q Consensus 287 DGAaA~LLs~~ 297 (504)
+||+++||++.
T Consensus 241 EGa~~~vLe~~ 251 (254)
T PF00109_consen 241 EGAGALVLERL 251 (254)
T ss_dssp -EEEEEEEEEH
T ss_pred CceEEEEEEEh
Confidence 99999999864
No 113
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=98.52 E-value=4.5e-07 Score=96.13 Aligned_cols=93 Identities=19% Similarity=0.199 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLF-NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+++++... +........+.+.+|++ ..+++.+. ++|++++.++..|...+++
T Consensus 27 ~~~L~~ea~~~AL~dagl~~~dID~v~vg~~~~~~~~~~~~~~~a~~lGl~-~~~~~~v~-~~c~sg~~ai~~A~~~I~s 104 (398)
T PRK06157 27 AEDLMVEAFLEALADAGIEPKDIDAAWFGTHYDEIGSGKSGTPLSRALRLP-NIPVTRVE-NFCATGSEAFRGAVYAVAS 104 (398)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEeccccccccchhHHHHHHcCCC-CCCEEEEe-cccHHHHHHHHHHHHHHHC
Confidence 578999999999999999999999999875422 21122235688899998 48899999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||++.|.+|.
T Consensus 105 G~~d~vlv~G~e~~s~ 120 (398)
T PRK06157 105 GAYDIALALGVEKLKD 120 (398)
T ss_pred CCCCEEEEEEEeeccc
Confidence 9999999999998764
No 114
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=98.51 E-value=4e-07 Score=96.12 Aligned_cols=94 Identities=12% Similarity=0.161 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC-CC-CCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFAN-TNVKPKDIGILVVNCSLF-NP-TPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~-agi~~~dId~LI~~~s~~-~~-~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
+++|+..+++++|++ +|++|++||.+++++... .. .+..+..+....|++..++++.++ .+|++|+.|+.+|...+
T Consensus 27 ~~~L~~~~~~~al~~~agl~~~~Id~vi~g~~~~~~~~g~~~ar~~~~~~Gl~~~~p~~~V~-~~caSG~~Ai~~A~~~I 105 (387)
T PRK08947 27 AEDLSAHLMRSLLARNPALDPAEIDDIIWGCVQQTLEQGFNIARNAALLAGIPHSVPAVTVN-RLCGSSMQALHDAARAI 105 (387)
T ss_pred HHHHHHHHHHHHHHhccCcChHHhCeEEEEeccccccccccHHHHHHHHcCCCCCCcceeee-chhHHHHHHHHHHHHHH
Confidence 688999999999997 699999999999987532 22 244566788899998669999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+.+||++.|.+|.
T Consensus 106 ~sG~~d~vlv~G~E~ms~ 123 (387)
T PRK08947 106 MTGDGDVFLIGGVEHMGH 123 (387)
T ss_pred HCCCCCEEEEcccccccc
Confidence 999999999999999885
No 115
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=98.49 E-value=7e-07 Score=95.69 Aligned_cols=94 Identities=21% Similarity=0.249 Sum_probs=79.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCC--cCEEEEeecC--C-CCCCchHHHHHHHcCCC------CcceeEEecCCcchHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKD--IGILVVNCSL--F-NPTPSLSAMIVNKYKLR------GNIRSFNLGGMGCSAGVIA 242 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~d--Id~LI~~~s~--~-~~~Ps~a~~I~~~lGl~------~~~~~~dl~g~gCsg~l~a 242 (504)
..+|+.+|++++|+++|++++| ||.+|+++.. . ...+..+..++..+|++ ..++++.+. .+|++++.|
T Consensus 48 ~~eL~~~a~~~al~~agl~~~d~~ID~vi~G~~~~~~~~~~~~~a~~~~~~~gl~~~~~gl~~~p~~~V~-~~caSG~~A 126 (438)
T PTZ00455 48 LEELLATAIQGTLENTGLDGKAALVDKVVVGNFLGELFSSQGHLGPAAVGSLGQSGASNALLYKPAMRVE-GACASGGLA 126 (438)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCcCEEEEEeccccccccccchHHHHHHhccCcccccccCCCceeEEE-CcCHHHHHH
Confidence 6889999999999999999999 9999987542 1 12355666777666554 368899999 699999999
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccCcC
Q 010687 243 IDLAKDMLQVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 243 L~lA~~lL~a~~~~~aLVVs~E~~S~ 268 (504)
+..|...+++|..+.+||+++|.+|.
T Consensus 127 i~~A~~~I~sG~~dvvlv~G~E~ms~ 152 (438)
T PTZ00455 127 VQSAWEALLAGTSDIALVVGVEVQTT 152 (438)
T ss_pred HHHHHHHHHCCCCCEEEEEEEeeccc
Confidence 99999999999999999999998775
No 116
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=98.47 E-value=3.8e-05 Score=81.05 Aligned_cols=89 Identities=11% Similarity=0.147 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHHHhCC-CCC-CCcCEEEEeecCCC-CCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTN-VKP-KDIGILVVNCSLFN-PTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~ag-i~~-~dId~LI~~~s~~~-~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
..+|+.+|++++|+++| +++ +|||.+++++.... ........++..+|+.. ...+.+ |+++..++..|...+
T Consensus 25 ~~eL~~eA~~~Al~DAG~l~~~~dId~~~~~~~~~~~~~~~~~~~~~~~lg~~~-~~~~~v----~~sg~~a~~~A~~aV 99 (385)
T PRK06066 25 FREMMFEAASRAYKDAGNINPRRDVDSFISCQEDFWEGIAIADEFAPDQIGGAM-RPTMTV----AGDGLQGLAHAVMHI 99 (385)
T ss_pred HHHHHHHHHHHHHHhcCCCCChhcCCEEEEecCcccCcccccchhHHHHcccCC-CCeEEE----eCcHHHHHHHHHHHH
Confidence 57899999999999999 997 79999987542111 11112244678899852 344444 778899999999999
Q ss_pred hcCCCCeEEEEEeccCc
Q 010687 251 QVHRNTYAVVVSTENIT 267 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S 267 (504)
++|..+.|||++.|..+
T Consensus 100 ~sG~~d~vLv~g~~~~~ 116 (385)
T PRK06066 100 NSGLANVVVVEAHSKPS 116 (385)
T ss_pred HcCCCCEEEEEEEeecc
Confidence 99999999999998653
No 117
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=98.46 E-value=6.6e-07 Score=95.73 Aligned_cols=93 Identities=16% Similarity=0.107 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCchHH-HHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLF-NPTPSLSA-MIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~-~~~Ps~a~-~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|+.+|++++|+++|++++|||.+++++... ...+..+. .++..+|++ ..+++.+. .+|+++..++..|...|+
T Consensus 37 ~~eL~~eA~~~Al~dagl~~~dID~vv~~~~~~~~~g~~~~~~~~~~~lGl~-~~~~~~v~-~~~aSg~~ai~~A~~~I~ 114 (430)
T PRK06365 37 FRERVKKAFDYAMNDAGLTLADIDGSVASYFSDHFQRQLLAGIMVQDYLGLV-PKPSKRIE-GGGATGGLAFQAGYEEIA 114 (430)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEEecccccccccchhhHHHHHhcCCC-CCceEEEe-CCcHHHHHHHHHHHHHHH
Confidence 478999999999999999999999988765332 11223333 467999998 48999999 699999999999999999
Q ss_pred cCCCCeEEEEEeccCcC
Q 010687 252 VHRNTYAVVVSTENITQ 268 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~ 268 (504)
+|..+.|||+++|..|.
T Consensus 115 sG~~~~vLv~G~e~~s~ 131 (430)
T PRK06365 115 SGRMDCVAVYGFETMSH 131 (430)
T ss_pred cCCCCEEEEEEeeeccc
Confidence 99999999999997653
No 118
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=98.45 E-value=4.1e-06 Score=86.98 Aligned_cols=121 Identities=12% Similarity=0.080 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHHhCCC--CCCCcCEEEEeecCCC-----------------CCC---------chHHHHHHHcCCCCc
Q 010687 174 AEQVMFGALDNLFANTNV--KPKDIGILVVNCSLFN-----------------PTP---------SLSAMIVNKYKLRGN 225 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi--~~~dId~LI~~~s~~~-----------------~~P---------s~a~~I~~~lGl~~~ 225 (504)
...++..|++++++++|+ +++++++++-.+.... ..| ..+..|...+|++.
T Consensus 4 ~~~~~~~a~~~a~~~a~~~~~~~r~Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~G- 82 (342)
T PRK14691 4 WWRYKWITFHPSLTHADNTEKQERTATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKG- 82 (342)
T ss_pred HHHHHHHHHHHHHHhCCCCCCcccEEEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCC-
Confidence 567889999999999995 6778877765432110 011 25677889999984
Q ss_pred ceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCC---------------c-------CCCCcCcccccc
Q 010687 226 IRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNW---------------Y-------FGNKKSMLIPNC 283 (504)
Q Consensus 226 ~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~---------------~-------~~~dr~~l~~~~ 283 (504)
+++-++ .+|++++.||..|.++|+.|..+.+||.++|.....+ . .+-|+.. ...
T Consensus 83 -p~~ti~-~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~f~~~~~ls~~~~~~p~~~~rPFd~~r--~G~ 158 (342)
T PRK14691 83 -PIGAPV-TACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTAR--DGF 158 (342)
T ss_pred -Cccccc-cHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHhhhhhcCCCCCCCcCCCCCCCCC--CCc
Confidence 788888 5999999999999999999999999999998732100 0 0001110 246
Q ss_pred ccccccEEEEEecccc
Q 010687 284 LFRVGGSAVLLSNKAK 299 (504)
Q Consensus 284 lfgDGAaA~LLs~~~~ 299 (504)
++||||+++||++.+.
T Consensus 159 v~gEGAa~lvLes~~~ 174 (342)
T PRK14691 159 VMGEGAGLLIIEELEH 174 (342)
T ss_pred cccceEEEEEEeeHHH
Confidence 7899999999997654
No 119
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=98.43 E-value=6.2e-07 Score=94.63 Aligned_cols=94 Identities=13% Similarity=0.153 Sum_probs=81.0
Q ss_pred HHHHHHHHHHHHHHh-CCCCCCCcCEEEEeecCC-C-CCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFAN-TNVKPKDIGILVVNCSLF-N-PTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 174 a~~la~~Aa~~aL~~-agi~~~dId~LI~~~s~~-~-~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
+.+|+.+|++++|++ +|++|++||.+++++... . ..+..+..+....|++..++++.++ .+|++++.|+.+|.+.+
T Consensus 25 ~~~L~~~a~~~al~~~agl~~~~Id~v~~G~~~~~~~~g~~~ar~~~~~~g~~~~~p~~tV~-~~CaSG~~Ai~~Aa~~I 103 (385)
T TIGR02445 25 AEDLSAHLMSKLLARNPKVDPAEVEDIYWGCVQQTLEQGFNIARNAALLAQIPHTSAAVTVN-RLCGSSMQALHDAARAI 103 (385)
T ss_pred HHHHHHHHHHHHHHhccCCCHHHcCEEEEecccccccccchHHHHHHHHCCCCCCcchhhhh-hhhHHHHHHHHHHHHHH
Confidence 689999999999997 599999999999986532 1 1234666667688998779999999 69999999999999999
Q ss_pred hcCCCCeEEEEEeccCcC
Q 010687 251 QVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~ 268 (504)
++|..+.+|+++.|.+|.
T Consensus 104 ~sG~~d~vlagG~E~ms~ 121 (385)
T TIGR02445 104 MTGDADVCLVGGVEHMGH 121 (385)
T ss_pred HCCCCCEEEEeeehhccc
Confidence 999999999999999875
No 120
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=98.41 E-value=1.8e-05 Score=79.16 Aligned_cols=117 Identities=17% Similarity=0.261 Sum_probs=76.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
-..|..+|++.+|+|++++++|||.++-.--....++ +.+.++.|++ +-+.+.| +||.+.-+|.+|..++..+
T Consensus 51 E~~m~~~A~~~al~Ka~l~~~dId~~~aGDLlnQ~i~--s~f~ar~l~i----Pf~Glyg-ACST~~e~l~laa~~vdgg 123 (329)
T PF07451_consen 51 ESKMQKEAVELALKKAGLKKEDIDYLFAGDLLNQIIS--SSFAARDLGI----PFLGLYG-ACSTMMESLALAAMLVDGG 123 (329)
T ss_dssp HHHHHHHHHHHHHHHTT--GGG-SEEEEEETTCCCCH--HHHHHHHHT------EEEB---CCCHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCeEEEehhhhhhhHH--HHHHHHhcCC----Cccchhh-HHHHHHHHHHHHHHHHhCC
Confidence 4568899999999999999999998886543333333 4788888876 4899997 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC---CCcC----CCCcCccccccccccccEEEEEecccc
Q 010687 254 RNTYAVVVSTENITQ---NWYF----GNKKSMLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~---~~~~----~~dr~~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
-.+++|+.++-.... .|.. +..|.. +...---||+|+||++...
T Consensus 124 ~a~~vla~tSSH~~tAERQfR~P~EyG~Qrp~--tAqwTVTGaGa~il~~~~~ 174 (329)
T PF07451_consen 124 FADYVLAATSSHFATAERQFRFPTEYGGQRPP--TAQWTVTGAGAAILSKEGS 174 (329)
T ss_dssp S-SEEEEEEEE-CCHHHHHT---GGGT----T--T--EE--EEEEEEEESS--
T ss_pred CcceEEEEeccccchhhhhccCchhccCCCCC--cccEEEeceEEEEEecCCC
Confidence 889999888665442 2211 233432 4455568999999998765
No 121
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=98.40 E-value=1.4e-06 Score=93.06 Aligned_cols=94 Identities=16% Similarity=0.236 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC-CCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLF-NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~-~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
..+|+.+|++++|+++|++++|||.+|+++... ...+..+..+.-..|++...+++.++ ++|++++.++..|.+.+++
T Consensus 31 ~~eL~~~a~~~al~~agl~~~~Id~vv~G~~~~~~~~~~~~r~~~l~~gl~~~~p~~~V~-~~CaSG~~ai~~A~~~I~s 109 (427)
T PRK09268 31 NQDMLTAALDGLVDRFGLQGERLGEVVAGAVLKHSRDFNLTRECVLGSALSPYTPAYDLQ-QACGTGLEAAILVANKIAL 109 (427)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEEecccCCccccHHHHHHHHcCCCCCCceeeee-chhhHHHHHHHHHHHHHHC
Confidence 688999999999999999999999999986432 11244566655666676568999999 6999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+.+||++.|.+|.
T Consensus 110 G~~d~vlvgG~E~ms~ 125 (427)
T PRK09268 110 GQIDSGIAGGVDTTSD 125 (427)
T ss_pred CCCCEEEEeeEEccCC
Confidence 9999999999999885
No 122
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.37 E-value=2.7e-05 Score=98.24 Aligned_cols=216 Identities=18% Similarity=0.184 Sum_probs=127.5
Q ss_pred hHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcC-CC---------cC--C----CC
Q 010687 212 LSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQ-NW---------YF--G----NK 275 (504)
Q Consensus 212 ~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~-~~---------~~--~----~d 275 (504)
.+.+|.++||+++ +++.+. .+|++++.||++|.+.|+.|..+.+||.+++.... .. +. + -|
T Consensus 185 ~A~RIS~~f~L~G--ps~tVd-tACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~~lS~~g~crpFD 261 (2582)
T TIGR02813 185 ISGRIANRFDLGG--MNCVVD-AACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTPAFTTNEDIQPFD 261 (2582)
T ss_pred HHHHHHHHhCCCC--Cccccc-chhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhccCcCCCCCccCCC
Confidence 4778999999984 788999 69999999999999999999999999998876321 10 00 0 11
Q ss_pred cCccccccccccccEEEEEeccccccccccceEeeEEEE-eecCCCccccceeecccCCCCcccccchhHHHHHHHHHhh
Q 010687 276 KSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRT-HKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKA 354 (504)
Q Consensus 276 r~~l~~~~lfgDGAaA~LLs~~~~~~~~~~~~l~~~v~t-~~~~d~~~~~~~~~~~d~~g~~g~~ls~dl~~v~~~~lk~ 354 (504)
.+- ...+.|+|+++++|.+-....++ +=++...++. ....|++. ..++.+ + ..+
T Consensus 262 ~~a--dG~v~GEGag~vvLkrL~dA~~d-Gd~IyAvI~G~g~~~DG~~-~~itaP-------------~---~~g----- 316 (2582)
T TIGR02813 262 IDS--KGMMIGEGIGMMALKRLEDAERD-GDRIYAVIKGVGASSDGKF-KSIYAP-------------R---PEG----- 316 (2582)
T ss_pred CCC--CcccccceEEEEEeCcHHHHHhC-CCcEEEEEEEEEEcCCCCC-CCCcCC-------------C---HHH-----
Confidence 110 24688999999999975432111 1122233322 22233221 111111 0 000
Q ss_pred hhhhcCCCccchhhHHHHHHHHHHHHHHH-hhccCCccCcccccCEEEEcCCCHHH-----HHHHHHHcCCCch---hhh
Q 010687 355 NITTLGPLVLPISEQLLFFATLVAKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAV-----IDELEKNLQLLPE---HVE 425 (504)
Q Consensus 355 ni~~~gp~vlp~se~~~~~~~~~~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~v-----l~~i~~~Lgl~~e---~~~ 425 (504)
|. ...++.++ .++.+ +||+++..|-.|..+ ++.+.+.++-... .+
T Consensus 317 --------------q~-----~~i~~Al~~Agi~p------~~I~yIeaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~- 370 (2582)
T TIGR02813 317 --------------QA-----KALKRAYDDAGFAP------HTCGLIEAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHI- 370 (2582)
T ss_pred --------------HH-----HHHHHHHHHcCCCH------HHCCEEEecCCCCCCCCHHHHHHHHHHhcccccCCCCc-
Confidence 00 01133333 33443 899999999977655 3445566653221 11
Q ss_pred hhhhccccccccccchHHHHHHHH---HHcCCCC--------------------------------CC--CEEEEEeech
Q 010687 426 ASRMTLHRFGNTSSSSIWYELAYT---EAKGRMR--------------------------------RG--NRVWQIAFGS 468 (504)
Q Consensus 426 ~S~~~l~r~GNtsSasi~~~L~~~---~~~g~i~--------------------------------~G--d~Vlli~fG~ 468 (504)
+--.+=..+||+-+++=...|... ++.|.+. .| .++..-+||.
T Consensus 371 ~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGf 450 (2582)
T TIGR02813 371 ALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDIENSPFYLNTETRPWMQREDGTPRRAGISSFGF 450 (2582)
T ss_pred eeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccceeecCCcccCcccCCCCccEEEEeCccC
Confidence 101122458999998887777653 2332211 11 3567788998
Q ss_pred hHHhhheeeEeec
Q 010687 469 GFKCNSAVWQALR 481 (504)
Q Consensus 469 G~~~~sav~r~~~ 481 (504)
|-+..+++++-..
T Consensus 451 GGtN~hvvlee~~ 463 (2582)
T TIGR02813 451 GGTNFHMVLEEYS 463 (2582)
T ss_pred CCeeEEEEEeecC
Confidence 8888888888653
No 123
>PRK07937 lipid-transfer protein; Provisional
Probab=98.23 E-value=0.00014 Score=75.99 Aligned_cols=88 Identities=14% Similarity=0.061 Sum_probs=65.4
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCC--CchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPT--PSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~--Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
.+|+.+|++++|+++|++++|||.++.+++ +... ......+...+|+.+......+. +++..++..|...+++
T Consensus 25 ~el~~eA~~~Al~DAgl~~~dID~~~~~~~-~~~~~~~~~~~~~~~~~G~~~~~~~~~v~----~~g~~a~~~A~~aI~s 99 (352)
T PRK07937 25 VEMLMPCFAELYAELGITKSDIGFWCSGSS-DYLAGRAFSFISAIDSIGAVPPINESHVE----MDAAWALYEAWVKLLT 99 (352)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEEcc-ccccccccchhhHHhhccCCCCCceEEec----CcHHHHHHHHHHHHhc
Confidence 689999999999999999999998854333 2111 11123455677874334455555 2477799999999999
Q ss_pred CCCCeEEEEEeccCc
Q 010687 253 HRNTYAVVVSTENIT 267 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S 267 (504)
|..+.|||++.|..+
T Consensus 100 G~~d~VLv~g~~k~~ 114 (352)
T PRK07937 100 GEVDTALVYGFGKSS 114 (352)
T ss_pred CCCCEEEEEEecccC
Confidence 999999999999754
No 124
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=98.11 E-value=8.7e-06 Score=86.04 Aligned_cols=88 Identities=11% Similarity=0.047 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
..+|+.+|++++|+++|++++|||.+++++.. .+.....+++.+|++ ..+..++. .||+++..++..|...+++|
T Consensus 25 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~---~~~~~~~~~~~lGl~-~~~~~~v~-~gg~s~~~a~~~A~~~I~sG 99 (388)
T PRK08142 25 VAQLHAEVAKGALADAGLSLADVDGYFCAGDA---PGLGPASMVDYLGLK-LRHVDSTE-TGGSSYLAHVGHAAQAIAAG 99 (388)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCC---CCccHHHHHHhCCCC-Ceeecccc-CCcHHHHHHHHHHHHHHHcC
Confidence 57899999999999999999999997753211 111124589999997 46788888 69999999999999999999
Q ss_pred CCCeEEEEEeccC
Q 010687 254 RNTYAVVVSTENI 266 (504)
Q Consensus 254 ~~~~aLVVs~E~~ 266 (504)
..+.||||+.|..
T Consensus 100 ~~d~vLvvg~e~~ 112 (388)
T PRK08142 100 KCSVALITLAGRP 112 (388)
T ss_pred CCCEEEEEeeeec
Confidence 9999999999974
No 125
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.05 E-value=0.00031 Score=74.63 Aligned_cols=121 Identities=13% Similarity=0.184 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCC-CCCcC--EEE-Eeec-C--C----C--------------------CCC-chHHHHHHH
Q 010687 172 EEAEQVMFGALDNLFANTNVK-PKDIG--ILV-VNCS-L--F----N--------------------PTP-SLSAMIVNK 219 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~-~~dId--~LI-~~~s-~--~----~--------------------~~P-s~a~~I~~~ 219 (504)
.....++..|++++++++|++ ..+.+ .-+ +.++ . . . ..| ..+..++..
T Consensus 69 d~~~~~a~~Aa~eAl~dAgl~~~~~~~~r~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~ 148 (412)
T COG0304 69 DRFSQLAVVAAVEALEDAGLDNELNVDMRVGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIV 148 (412)
T ss_pred cHHHHHHHHHHHHHHHHcCCCcccccCccEEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHH
Confidence 347889999999999999998 34443 222 2222 1 1 0 122 245678889
Q ss_pred cCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEecc-CcC--------------C------CcCC--CCc
Q 010687 220 YKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTEN-ITQ--------------N------WYFG--NKK 276 (504)
Q Consensus 220 lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~-~S~--------------~------~~~~--~dr 276 (504)
+|++ -+.+.+. .+|+++..||..|.++|+.|..+.+++.++|. ++. . .-++ .+|
T Consensus 149 ~g~~--G~~~~~~-tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~gF~am~Alst~nd~p~~asrPfd~~R 225 (412)
T COG0304 149 FGLK--GPNYTPV-TACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIAGFEAMRALSTRNDDPEKASRPFDKNR 225 (412)
T ss_pred hCCC--CCcCChh-hhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHHHHHHHHHhccCCCCccccCCCCCCCC
Confidence 9997 4788889 59999999999999999999999999999976 321 1 0001 234
Q ss_pred CccccccccccccEEEEEecccc
Q 010687 277 SMLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 277 ~~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
+ ..++|.||+++||+..+.
T Consensus 226 d----Gfv~gEGag~lVLE~~eh 244 (412)
T COG0304 226 D----GFVIGEGAGALVLEELEH 244 (412)
T ss_pred C----CEEEecceeEEEecChhh
Confidence 4 578999999999998664
No 126
>PRK07855 lipid-transfer protein; Provisional
Probab=97.95 E-value=3.3e-05 Score=81.60 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=70.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
..+|+.+|++++|+++|++++|||.+++++.. ..+. ..+++.+|+++.....++. .||+++..++..|...+++|
T Consensus 24 ~~~L~~eA~~~Al~DAgl~~~dID~~~~~~~~--~~~~--~~l~~~lGl~~~~~~~~v~-~gg~sg~~~~~~A~~~I~sG 98 (386)
T PRK07855 24 ELRLACEAVLAALDDAGLAPSDVDGLVTFTMD--TNPE--IAVARALGIGELKFFSRIH-YGGGAACATVQQAAMAVATG 98 (386)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCc--cccH--HHHHHHCCCCCCcceeeec-CCcHHHHHHHHHHHHHHHCC
Confidence 47899999999999999999999999874321 1222 4588999997424456888 59999999999999999999
Q ss_pred CCCeEEEEEe
Q 010687 254 RNTYAVVVST 263 (504)
Q Consensus 254 ~~~~aLVVs~ 263 (504)
..+.|||+++
T Consensus 99 ~~d~vLv~g~ 108 (386)
T PRK07855 99 VADVVVCYRA 108 (386)
T ss_pred CCCEEEEEee
Confidence 9999999987
No 127
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=97.93 E-value=0.00018 Score=72.01 Aligned_cols=95 Identities=18% Similarity=0.229 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec--CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS--LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s--~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
..+|...+.+..+++++++|++|+-+++.+. +..- -+.+.+-+-.-|++..++..-++ -.|++|+.|+.....-++
T Consensus 61 pDeLl~~vl~a~ie~t~~dp~~igdi~vG~vL~pg~g-a~e~R~a~~~ag~P~tvpv~tvN-RqCsSGLqaVadiA~~Ir 138 (435)
T KOG1389|consen 61 PDELLAAVLRAVIEKTNLDPSLIGDIVVGTVLAPGSG-ASECRMAAFYAGFPETVPVRTVN-RQCSSGLQAVADIAAKIR 138 (435)
T ss_pred hHHHHHHHHHHHHhhcCCCHHHhcceeeeeccCCCcc-hHHHHHHHHHcCCCcccchhhhh-hhhhhHHHHHHHHHHHHh
Confidence 4568888999999999999999999998754 3222 23333445556888777777777 799999999999999999
Q ss_pred cCCCCeEEEEEeccCcCCC
Q 010687 252 VHRNTYAVVVSTENITQNW 270 (504)
Q Consensus 252 a~~~~~aLVVs~E~~S~~~ 270 (504)
+|.++-.|-.+.|.+|.++
T Consensus 139 ~G~ydIGla~GvESMt~~~ 157 (435)
T KOG1389|consen 139 AGFYDIGLAAGVESMTTNY 157 (435)
T ss_pred cCceeeecccchhhhcccC
Confidence 9998999999999998753
No 128
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.73 E-value=0.0017 Score=77.00 Aligned_cols=186 Identities=12% Similarity=0.143 Sum_probs=116.0
Q ss_pred CceEEEEeeeecCCCCceechHHHHHHhhhcC----CCChhhHHHHHHHHHHhCCC-----ceEecc------------C
Q 010687 98 RSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTG----DFDESSLEFQRKILERSGLG-----EETYVP------------D 156 (504)
Q Consensus 98 ~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~----~~~~~~~~f~~~i~~~sGi~-----~r~~~~------------~ 156 (504)
.+|-|+|++|.+|. .-+.++|.+.+..-. .++++. |-.+..+-. .++|.. +
T Consensus 4 ~~IAIiGm~~rfPg---a~~~~~~W~~l~~g~~~i~~ip~~r-----wd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~ 75 (1061)
T COG3321 4 EPIAIIGMACRFPG---ADSPEEFWDLLKEGRDEITEVPADR-----WDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDA 75 (1061)
T ss_pred CcEEEEeccccCCC---CCCHHHHHHHHhcCCceeeecChhh-----hhHhhccCCccccccccccccccccCCccccCH
Confidence 34999999999999 456788888776411 122221 122222221 111211 1
Q ss_pred CCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCE----EEEee-cCCCCCC-------------------ch
Q 010687 157 AMHYLPPRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGI----LVVNC-SLFNPTP-------------------SL 212 (504)
Q Consensus 157 ~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~----LI~~~-s~~~~~P-------------------s~ 212 (504)
..+-++| +.++..+--..|..+.+-++|+++|+.|+.+.. |+.+. ..+|... -.
T Consensus 76 ~fFgisP--rEA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~ 153 (1061)
T COG3321 76 LFFGISP--REAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVA 153 (1061)
T ss_pred HHcCCCH--HHHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHH
Confidence 1111111 111111223347899999999999999998883 44443 3343322 15
Q ss_pred HHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcC--CCc--------CCC------Cc
Q 010687 213 SAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQ--NWY--------FGN------KK 276 (504)
Q Consensus 213 a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~--~~~--------~~~------dr 276 (504)
+.+|...|+++ -+++.|. .+||+.+.|+++|.+-|+.|..+.||+-+....-. .++ ..+ |.
T Consensus 154 a~Risy~l~l~--GPs~~vd-taCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~ 230 (1061)
T COG3321 154 AGRISYVLGLS--GPSVTVD-TACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDA 230 (1061)
T ss_pred HHHHHHHhcCC--CCCcccc-chhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceeccc
Confidence 67889999997 5889999 79999999999999999999988888776655321 111 011 11
Q ss_pred CccccccccccccEEEEEeccc
Q 010687 277 SMLIPNCLFRVGGSAVLLSNKA 298 (504)
Q Consensus 277 ~~l~~~~lfgDGAaA~LLs~~~ 298 (504)
+ -..++.|.|+++++|.+-.
T Consensus 231 ~--adG~v~geG~g~vvLKrl~ 250 (1061)
T COG3321 231 D--ADGYVRGEGAGVVVLKRLS 250 (1061)
T ss_pred C--CCCEEEeeeEEEEEEEEhH
Confidence 1 0246889999999998744
No 129
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]
Probab=97.66 E-value=0.00016 Score=76.51 Aligned_cols=95 Identities=16% Similarity=0.296 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhC--CCCCCCcCEEEEeecC--CCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANT--NVKPKDIGILVVNCSL--FNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 174 a~~la~~Aa~~aL~~a--gi~~~dId~LI~~~s~--~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~l 249 (504)
++++.....+..+++. ++++.+||.++..|.. ....+..+..++...|++.+++.+.++ .+|++++.|+..|...
T Consensus 27 ~e~l~~a~~~a~~~~~~~~vd~~~v~~~~~G~~~~~g~~~~~~ar~~a~~aGl~~~~p~~~V~-~~c~SG~~Av~~A~~~ 105 (392)
T COG0183 27 AEALGAALIDAGLERAPADVDAADVDDVILGCVLQAGEQGQNIARQAALAAGLPGSVPAVTVN-RACASGLAAVRLAAQA 105 (392)
T ss_pred HHHHHHHHHHHHhhhccccCCHHHhhhheeccccccccccccHHHHHHHHcCCCCCCCceEEe-ccchhHHHHHHHHHHH
Confidence 5666677777777544 6888889999988643 234667888999999999779999999 7999999999999999
Q ss_pred HhcCCCCeEEEEEeccCcCC
Q 010687 250 LQVHRNTYAVVVSTENITQN 269 (504)
Q Consensus 250 L~a~~~~~aLVVs~E~~S~~ 269 (504)
+++|..+.+|+++.|.+|..
T Consensus 106 I~sG~~dvvlagG~E~mS~~ 125 (392)
T COG0183 106 IASGEADVVLAGGVEKMSDA 125 (392)
T ss_pred HHCCCCCEEEEEeeeeccCC
Confidence 99999999999999999974
No 130
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=97.27 E-value=0.00067 Score=68.23 Aligned_cols=94 Identities=16% Similarity=0.161 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
+.+|+.-|++.+|+|++++++|++-+|+.+. +-+.--..+.+.+---|++-++.+..++ +.|++++.|+.+|.+-|+.
T Consensus 30 A~~Lgsvaikaalera~v~~~~v~eVi~GnVl~AnlGQapaRQaalgAGlp~sv~~tTvN-kvCaSgmKAv~laaQsI~~ 108 (396)
T KOG1390|consen 30 ATELGSVAIKAALERAVVPPSDVAEVIFGNVLSANLGQAPARQAALGAGLPYSVPATTVN-KVCASGMKAVILAAQSIQT 108 (396)
T ss_pred hhhHHHHHHHHHHHhcCCCHHHhhhhhhccccccccCcchHHHHHhhcCCCcceeeEeeh-hhhhhhHHHHHHHHHHHhc
Confidence 7889999999999999999999999998743 2222223346666667888889999999 8999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
|..+-++..+.|.+|.
T Consensus 109 G~~divVaGGmEsMS~ 124 (396)
T KOG1390|consen 109 GHADIVVAGGMESMSN 124 (396)
T ss_pred CCccEEEecccchhcc
Confidence 9999999999999996
No 131
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=97.00 E-value=0.00097 Score=65.46 Aligned_cols=89 Identities=15% Similarity=0.251 Sum_probs=73.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
.|++.+|+.++|++++++-++|+--++.-. .+. ....+-..++||. -++.||+++ .|+.|-.||-+|++++++|
T Consensus 30 pd~a~ea~tkal~da~ikys~vqqa~vgyvfgds---tcgqraiyevgmt-gipi~nvnn-ncatgssalflakqiiesg 104 (408)
T KOG1406|consen 30 PDFAKEAITKALQDAGIKYSEVQQAVVGYVFGDS---TCGQRAIYEVGMT-GIPIYNVNN-NCATGSSALFLAKQIIESG 104 (408)
T ss_pred chHHHHHHHHHHHhcCCCHHHHHhhhheeeecCC---ccchHHHHhcccc-CcceeeccC-ccccCchHHHHHHHHHhcC
Confidence 468999999999999999999886544321 111 1224555689998 699999995 9999999999999999999
Q ss_pred CCCeEEEEEeccCcC
Q 010687 254 RNTYAVVVSTENITQ 268 (504)
Q Consensus 254 ~~~~aLVVs~E~~S~ 268 (504)
..+.+|-.+-|.+++
T Consensus 105 n~dcvlalgfekm~~ 119 (408)
T KOG1406|consen 105 NSDCVLALGFEKMER 119 (408)
T ss_pred CcceEEeechhhhCC
Confidence 999999999999886
No 132
>PF08540 HMG_CoA_synt_C: Hydroxymethylglutaryl-coenzyme A synthase C terminal; InterPro: IPR013746 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase. Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the C-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1TXT_D 1TVZ_A 1X9E_B 2HDB_B 3V4X_A 3V4N_C 2P8U_A 2FA0_A 2F9A_A 2F82_A ....
Probab=96.78 E-value=0.001 Score=67.08 Aligned_cols=60 Identities=23% Similarity=0.284 Sum_probs=44.2
Q ss_pred hhhhhhhccccccccccchHHHHHHHHH--HcCCCCCCCEEEEEeechhHHhhheeeEeecc
Q 010687 423 HVEASRMTLHRFGNTSSSSIWYELAYTE--AKGRMRRGNRVWQIAFGSGFKCNSAVWQALRN 482 (504)
Q Consensus 423 ~~~~S~~~l~r~GNtsSasi~~~L~~~~--~~g~i~~Gd~Vlli~fG~G~~~~sav~r~~~~ 482 (504)
|++||...-++.||+.++|++..|.-++ ..+..-.|+||.|.++|||......-.+..+.
T Consensus 143 kv~psl~~~~~vGN~YTaSly~~L~SlL~~~~~~~l~GkrI~~FSYGSG~~s~~fs~~v~~~ 204 (282)
T PF08540_consen 143 KVEPSLLYSRQVGNMYTASLYLGLASLLSSAEADDLAGKRIGMFSYGSGLASEFFSGRVQPG 204 (282)
T ss_dssp HCHHHTHHHHHHB--GGGHHHHHHHHHHHHHHSCHHTT-EEEEEEEETTTEEEEEEEEE-TT
T ss_pred HHhHHHHHHHHcCceehHHHHHHHHHHhhccCccccCCCEEEEEEecCCcceeEEEEEEeCC
Confidence 6677777788899999999999999998 34444579999999999997655555555443
No 133
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=96.37 E-value=0.048 Score=56.07 Aligned_cols=119 Identities=13% Similarity=0.180 Sum_probs=83.3
Q ss_pred HHHHHHHHHHHHHHHhCCCCCC---CcC-----EEEEeecCC---------------------CCCC----c-hHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPK---DIG-----ILVVNCSLF---------------------NPTP----S-LSAMIVN 218 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~---dId-----~LI~~~s~~---------------------~~~P----s-~a~~I~~ 218 (504)
....++..|++++|+++++-+. +.| .+|-.+..+ +..| + -+.+|.-
T Consensus 93 ~~~~~al~aa~eAL~da~~~~~~~~e~dk~~~GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm 172 (440)
T KOG1394|consen 93 KFTKLALTAAEEALKDAGLLDVNLSEEDKEKTGVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSM 172 (440)
T ss_pred HHHHHHHHHHHHHHHhcCCCCcccchhhhhhhceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhh
Confidence 4788999999999999997765 222 233222110 0122 2 2578999
Q ss_pred HcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCC-----Cc----------CC--------CC
Q 010687 219 KYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQN-----WY----------FG--------NK 275 (504)
Q Consensus 219 ~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~-----~~----------~~--------~d 275 (504)
+||++ .+.+.++ .+|+.+..+|.-|.++++-|..+..|--++|.+-.. |. ++ .+
T Consensus 173 ~~gl~--GpnhsvS-TACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P~~aSRPfD~~ 249 (440)
T KOG1394|consen 173 KYGLR--GPNHSVS-TACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNPQKASRPFDKK 249 (440)
T ss_pred hhcCc--CCchhhH-hhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhhhHHHHHHhhhcCCCccccCCCCccC
Confidence 99998 4788899 799999999999999999998777777777764210 00 01 12
Q ss_pred cCccccccccccccEEEEEeccc
Q 010687 276 KSMLIPNCLFRVGGSAVLLSNKA 298 (504)
Q Consensus 276 r~~l~~~~lfgDGAaA~LLs~~~ 298 (504)
|+ ..+.|.|++.++|+.-+
T Consensus 250 Rd----GFVmGEGagvlvlEelE 268 (440)
T KOG1394|consen 250 RD----GFVMGEGAGVLVLEELE 268 (440)
T ss_pred CC----ceeeccceeEEehHhHH
Confidence 33 46889999999998644
No 134
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=95.22 E-value=0.039 Score=54.32 Aligned_cols=92 Identities=15% Similarity=0.150 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEe----ecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVN----CSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~----~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~l 249 (504)
+.+|..-|++.+|+.+++.++.+|.+|+. +|.+-. -++..|--+.|.+.+.++..++ -=|.++..++-.+.+-
T Consensus 28 aTdL~~~AakAAL~aa~v~~e~VD~VI~GNV~aSSsDgI--Yl~RHvGL~~GvP~e~pALtiN-RLCGSGFQsiVNgaQ~ 104 (396)
T KOG1391|consen 28 ATDLGVVAAKAALKAANVGAEAVDHVIMGNVLASSSDGI--YLARHVGLRVGVPKETPALTIN-RLCGSGFQSIVNGAQE 104 (396)
T ss_pred hhhHHHHHHHHHHhhcCCChhhcceEEEeeeeeccCCce--EeeeccccccCCcCccCceeeh-hhhcccHHHHHhhHHH
Confidence 78899999999999999999999999975 333311 1223344445556678899999 6999999999999999
Q ss_pred HhcCCCCeEEEEEeccCcC
Q 010687 250 LQVHRNTYAVVVSTENITQ 268 (504)
Q Consensus 250 L~a~~~~~aLVVs~E~~S~ 268 (504)
+..+..+-+|--++|++|.
T Consensus 105 I~vgea~ivL~GGtEnMSq 123 (396)
T KOG1391|consen 105 ICVGEAEIVLCGGTENMSQ 123 (396)
T ss_pred hhcCcceEEEecCcccccc
Confidence 9998888899999999986
No 135
>KOG1392 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=94.57 E-value=0.03 Score=55.81 Aligned_cols=94 Identities=11% Similarity=0.158 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
+.+++.+|...+|+++.++.+.||.||+.+. ...-+..++..-+-.-|.+..+++..+. |+|-+.-.|+-..-.|+.+
T Consensus 66 phdlar~al~~ll~kt~lpke~~dyii~gtviqevktsniareaal~agfsdktpahtvt-macissn~amttgmgliat 144 (465)
T KOG1392|consen 66 PHDLAREALKALLEKTKLPKEQLDYIICGTVIQEVKTSNIAREAALLAGFSDKTPAHTVT-MACISSNVAMTTGMGLIAT 144 (465)
T ss_pred hhHHHHHHHHHHHHhccCCHHHhceeeehhhHHHHhcchHHHHHHHhcCCCCCCccceee-eehhccchhhhccceeEee
Confidence 6789999999999999999999999999874 4555666777666677888788999999 9999999999999999999
Q ss_pred CCCCeEEEEEeccCcC
Q 010687 253 HRNTYAVVVSTENITQ 268 (504)
Q Consensus 253 ~~~~~aLVVs~E~~S~ 268 (504)
+..+.++--+.|.+|.
T Consensus 145 g~~dvivaggvelmsd 160 (465)
T KOG1392|consen 145 GNADVIVAGGVELMSD 160 (465)
T ss_pred CCcCEEEEcceeeccc
Confidence 8766666666888885
No 136
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2.3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....
Probab=94.54 E-value=0.043 Score=45.37 Aligned_cols=76 Identities=12% Similarity=0.160 Sum_probs=46.8
Q ss_pred HHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE---EecCCcchHHHHHHHHHHHHHhcCCCCeEEEEE
Q 010687 186 FANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF---NLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVS 262 (504)
Q Consensus 186 L~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs 262 (504)
|+++|++++|||.++... ........+.+++|++++.... ++++++|++-..+|..+.+-=+..+++++|+++
T Consensus 1 L~~~g~~~~did~~i~hq----~~~~~~~~~~~~lgi~~~~~~~~~~~~Gn~~sa~~~~~L~~~~~~g~~~~Gd~vl~~~ 76 (90)
T PF08541_consen 1 LERAGLSPDDIDHFIPHQ----ASKKILDSIAKRLGIPPERFPDNLAEYGNTGSASIPINLADALEEGRIKPGDRVLLVG 76 (90)
T ss_dssp HHHTT--GGGESEEEE-S----SSHHHHHHHHHHHTS-GGGBE-THHHH-B-GGGHHHHHHHHHHHTTSSCTTEEEEEEE
T ss_pred CccccCCHHHCCEEEeCC----CCHHHHHHHHHHcCCcHHHHHHHHhccCcchhhhHHHHHHHHHHcCCCCCCCEEEEEE
Confidence 689999999999999763 2234556699999998553332 345567777777775544422233678888888
Q ss_pred ecc
Q 010687 263 TEN 265 (504)
Q Consensus 263 ~E~ 265 (504)
.-.
T Consensus 77 ~G~ 79 (90)
T PF08541_consen 77 FGA 79 (90)
T ss_dssp EET
T ss_pred EEh
Confidence 643
No 137
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative. Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.
Probab=94.03 E-value=0.21 Score=52.01 Aligned_cols=83 Identities=13% Similarity=0.145 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee-----EEecCCcchHHHHHHHHHHH
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS-----FNLGGMGCSAGVIAIDLAKD 248 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~dl~g~gCsg~l~aL~lA~~ 248 (504)
....+.++++++|+++|++++|||.+++.. +.+.+-..+.++||++++-.. -+++++++++...+|.-+..
T Consensus 206 ~~~~~~~~~~~~L~~~gl~~~did~~i~Hq----~~~~~~~~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~ 281 (345)
T TIGR00748 206 YFHHVVTAAKGLMEKLGLTPEDFDYAVFHQ----PNGKFYLVAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLD 281 (345)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHcCEEEeCC----CChHHHHHHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHH
Confidence 344556899999999999999999998763 233455668999999743222 16777888888888876644
Q ss_pred HHhcCCCCeEEEEE
Q 010687 249 MLQVHRNTYAVVVS 262 (504)
Q Consensus 249 lL~a~~~~~aLVVs 262 (504)
.+ .+++++|+++
T Consensus 282 ~~--~~Gd~vll~~ 293 (345)
T TIGR00748 282 IA--EPGDRILAVS 293 (345)
T ss_pred hc--CCCCEEEEEE
Confidence 22 2344444443
No 138
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=93.99 E-value=0.28 Score=51.75 Aligned_cols=89 Identities=15% Similarity=0.164 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHc-----CCCCcce---eEEecCCcchHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKY-----KLRGNIR---SFNLGGMGCSAGVIAID 244 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~l-----Gl~~~~~---~~dl~g~gCsg~l~aL~ 244 (504)
...+...++++++|+++|++++|||.++... ..+.+-..++++| |++++-. --++++++|++...+|.
T Consensus 269 ~~~~~~~~~i~~~L~~~gl~~~DId~~v~Hq----~n~~~~~~v~~~l~~~~~gl~~~k~~~~~~~~GNt~sAsipi~L~ 344 (378)
T PRK06816 269 NIVVYTIKPLLELVDKRNLDPDDIDYFLPHY----SSEYFREKIVELLAKAGFMIPEEKWFTNLATVGNTGSASIYIMLD 344 (378)
T ss_pred HhHHHHHHHHHHHHHHcCCChhhCCEEeeCc----ccHHHHHHHHHHHHhccCCCChhheEEeccccccccchHHHHHHH
Confidence 3445668899999999999999999998653 2344556778876 7764321 22667778888888887
Q ss_pred HHHHHHhcCCCCeEEEEEecc
Q 010687 245 LAKDMLQVHRNTYAVVVSTEN 265 (504)
Q Consensus 245 lA~~lL~a~~~~~aLVVs~E~ 265 (504)
.|..-=+-.+++++++.+.|.
T Consensus 345 ~a~~~g~~~~Gd~vl~~~~~s 365 (378)
T PRK06816 345 ELLNSGRLKPGQKILCFVPES 365 (378)
T ss_pred HHHHcCCCCCCCEEEEEEecc
Confidence 653211113578898888875
No 139
>PRK06025 acetyl-CoA acetyltransferase; Provisional
Probab=93.79 E-value=0.2 Score=53.52 Aligned_cols=91 Identities=13% Similarity=0.234 Sum_probs=64.4
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCC--------cchHHHHHHHHHHHHH
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGM--------GCSAGVIAIDLAKDML 250 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~lL 250 (504)
..|++++|+++|++++|||.+.++- ..........+++|++. ..+|++|- |++|....+.+..+|.
T Consensus 318 ~~Ai~~aL~~AGl~~~DID~~ei~e----aFa~~~l~~~~~lg~~~--~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~ 391 (417)
T PRK06025 318 VPAAKKVLAKAGLTKDDIDLWEINE----AFAVVAEKFIRDLDLDR--DKVNVNGGAIALGHPIGATGSILIGTVLDELE 391 (417)
T ss_pred HHHHHHHHHHcCCCHHHCcEEEEch----HHHHHHHHHHHHcCCCh--hhccccCCHHhcCCchhHHHHHHHHHHHHHHH
Confidence 4799999999999999999987651 12344456778899864 45677763 7888888888888887
Q ss_pred hcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEec
Q 010687 251 QVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSN 296 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~ 296 (504)
+.+ .++.|+ +.|..|-.++|+||++
T Consensus 392 ~~g-~~~Gl~--------------------~~c~~GG~g~A~lle~ 416 (417)
T PRK06025 392 RRG-LKRGLV--------------------TMCAAGGMAPAIIIER 416 (417)
T ss_pred HhC-CCeEEE--------------------EEEeeccceeEEEEEe
Confidence 654 344422 3456666677888764
No 140
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=92.91 E-value=0.28 Score=50.31 Aligned_cols=86 Identities=15% Similarity=0.200 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee---EEecCCcchHHHHHHHHHH
Q 010687 171 REEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS---FNLGGMGCSAGVIAIDLAK 247 (504)
Q Consensus 171 ~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~---~dl~g~gCsg~l~aL~lA~ 247 (504)
.+++.+...++++++|+++|++++|||.+++.. ..+.+-..+.+++|++++-.. -+.+++++++...+|+.+
T Consensus 222 ~~~~~~~~~~~~~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~l~l~~~k~~~~l~~~Gn~~sas~~~~L~~~- 296 (326)
T PRK05963 222 FTEAVRMMSGASQNVLASAAMTPQDIDRFFPHQ----ANARIVDKVCETIGIPRAKAASTLETYGNSSAATIPLSLSLA- 296 (326)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCC----CCHHHHHHHHHHcCCCHHHhhhhHHhhCcHHHHHHHHHHHHH-
Confidence 345666778899999999999999999988642 235566778999999754322 234445555555666433
Q ss_pred HHHhcC---CCCeEEEEEe
Q 010687 248 DMLQVH---RNTYAVVVST 263 (504)
Q Consensus 248 ~lL~a~---~~~~aLVVs~ 263 (504)
++.+ +++++|+++.
T Consensus 297 --~~~~~~~~Gd~vll~~~ 313 (326)
T PRK05963 297 --NLEQPLREGERLLFAAA 313 (326)
T ss_pred --HHhCCCCCCCEEEEEEE
Confidence 3332 4577887774
No 141
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.83 E-value=0.46 Score=48.97 Aligned_cols=90 Identities=10% Similarity=0.130 Sum_probs=60.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE---EecCCcchHHHHHHHH
Q 010687 169 AAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF---NLGGMGCSAGVIAIDL 245 (504)
Q Consensus 169 ~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~g~gCsg~l~aL~l 245 (504)
+..++......++++++|+++|++++|||.+++.. ..+..-..+.+++|++++-... ..+++++++...+|+.
T Consensus 232 ~~~~~~~~~~~~~~~~~L~~~g~~~~did~~i~H~----~~~~~~~~~~~~lgl~~~k~~~~~~~~GN~~sas~~~~L~~ 307 (338)
T PRK09258 232 GLLKEGVELAVDTWEAFLAQLGWAVEQVDRVICHQ----VGAAHTRAILKALGIDPEKVFTTFPTLGNMGPASLPITLAM 307 (338)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEecCC----CCHHHHHHHHHHhCCCHHHceehHhhhCCcHHhHHHHHHHH
Confidence 34445666777899999999999999999988663 2344556899999997533322 2555566666666654
Q ss_pred HHHHHhcC---CCCeEEEEEecc
Q 010687 246 AKDMLQVH---RNTYAVVVSTEN 265 (504)
Q Consensus 246 A~~lL~a~---~~~~aLVVs~E~ 265 (504)
+ ++.+ +++++|+++...
T Consensus 308 ~---~~~g~~~~Gd~vll~~~G~ 327 (338)
T PRK09258 308 A---AEEGFLKPGDRVALLGIGS 327 (338)
T ss_pred H---HHhCCCCCCCEEEEEEech
Confidence 4 3433 467888877543
No 142
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=92.06 E-value=0.67 Score=47.39 Aligned_cols=84 Identities=11% Similarity=0.070 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee---EEecCCcchHHHHHHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS---FNLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~---~dl~g~gCsg~l~aL~lA~~l 249 (504)
++.....++++++|+++|++++|||.+++.. ..+.+-..+++++|++.+-.. -++++++|++...+|. .+
T Consensus 222 ~~~~~~~~~i~~~L~~~g~~~~did~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~sas~~~~L~---~~ 294 (325)
T PRK12879 222 WAVRTMPKGARQVLEKAGLTKDDIDWVIPHQ----ANLRIIESLCEKLGIPMEKTLVSVEYYGNTSAATIPLALD---LA 294 (325)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHhhhhHhhhCchHHHHHHHHHH---HH
Confidence 3445566889999999999999999998763 335556789999999743222 2445555666666664 34
Q ss_pred HhcC---CCCeEEEEEe
Q 010687 250 LQVH---RNTYAVVVST 263 (504)
Q Consensus 250 L~a~---~~~~aLVVs~ 263 (504)
++.+ +++++|+++.
T Consensus 295 ~~~g~~~~Gd~vll~~~ 311 (325)
T PRK12879 295 LEQGKIKPGDTLLLYGF 311 (325)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 5543 3567777664
No 143
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=91.80 E-value=0.73 Score=47.30 Aligned_cols=84 Identities=13% Similarity=0.196 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE---EecCCcchHHHHHHHHHHH
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF---NLGGMGCSAGVIAIDLAKD 248 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~g~gCsg~l~aL~lA~~ 248 (504)
+.+.....++++++|+++|++++|||.+++... ....-..++++||++++.... +.++.+|++...+|+ .
T Consensus 226 ~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~----~~~~~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~---~ 298 (329)
T PRK07204 226 KLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQA----SGPAMRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALF---E 298 (329)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCC----CHHHHHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHH---H
Confidence 345556778999999999999999999886632 123456899999997543332 344444555555554 3
Q ss_pred HHhcC---CCCeEEEEE
Q 010687 249 MLQVH---RNTYAVVVS 262 (504)
Q Consensus 249 lL~a~---~~~~aLVVs 262 (504)
+++.+ +++++|+++
T Consensus 299 ~~~~g~~~~Gd~vll~~ 315 (329)
T PRK07204 299 AIKQKKVQRGNKILLLG 315 (329)
T ss_pred HHHcCCCCCCCEEEEEE
Confidence 45444 456677665
No 144
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain
Probab=91.59 E-value=3.9 Score=39.92 Aligned_cols=114 Identities=13% Similarity=-0.019 Sum_probs=75.5
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCC----------------CCCc-h--------HHHHHHHcCCCCccee
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFN----------------PTPS-L--------SAMIVNKYKLRGNIRS 228 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~----------------~~Ps-~--------a~~I~~~lGl~~~~~~ 228 (504)
...|++.++.+++++. +++|.+|++|..+. ..|. + +.++.-..|. ....
T Consensus 34 ~~rla~~~a~~~~~~~----~~~d~~VfaS~~Gel~~t~~ll~~l~~~~~lSPT~Fs~SVHNA~aG~~sI~~~~--~~~~ 107 (218)
T PF13723_consen 34 LSRLALEAALECLAED----EQPDAIVFASRHGELERTFKLLEALAEEEELSPTAFSQSVHNAAAGYWSIATKN--TGPN 107 (218)
T ss_pred HHHHHHHHHHHHHhcc----CCCCcEEEEeCCCcHHHHHHHHHHHHhCCCcCccchhhhhhhHHHHHHHHHhCC--CCce
Confidence 6778888998888653 57788998875321 2342 1 2233333333 3567
Q ss_pred EEecCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEecccc
Q 010687 229 FNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 229 ~dl~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
.-+. .|=.++-.||.-|..+|+.+ .+.||||+.|-.....|...... .....--|.|++|++++.
T Consensus 108 tal~-a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p~~y~~~~~~----~~~~~~~A~al~L~~~~~ 172 (218)
T PF13723_consen 108 TALA-AGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLPEPYQEFRPE----RDPPFPYALALVLSPGDS 172 (218)
T ss_pred EEEe-cCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCChhhhhcccc----cCCCcCEEEEEEecCCCC
Confidence 7778 47788999999999999999 89999999998766455432111 112234577888887654
No 145
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction. Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).
Probab=91.44 E-value=0.76 Score=46.86 Aligned_cols=78 Identities=18% Similarity=0.112 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeec-CCCCCCchHHHHHHHcCCC---CcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCS-LFNPTPSLSAMIVNKYKLR---GNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s-~~~~~Ps~a~~I~~~lGl~---~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
+-..++++++|+++|++++|||.++.... ......-........++.+ .....-+++++++++++..|..+...++
T Consensus 205 ~~~~~~i~~al~~agl~~~did~~~~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~ 284 (332)
T cd00825 205 EGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLE 284 (332)
T ss_pred HHHHHHHHHHHHHcCCCHhHCCEEEccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHh
Confidence 34557999999999999999999987743 3222222233344444431 0112236677788888888887777666
Q ss_pred cC
Q 010687 252 VH 253 (504)
Q Consensus 252 a~ 253 (504)
.+
T Consensus 285 ~~ 286 (332)
T cd00825 285 HG 286 (332)
T ss_pred cC
Confidence 54
No 146
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III. Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.
Probab=91.36 E-value=0.66 Score=47.32 Aligned_cols=84 Identities=14% Similarity=0.205 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE---EecCCcchHHHHHHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF---NLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~g~gCsg~l~aL~lA~~l 249 (504)
+..+...++++++|+++|++++|||.+++.. ..+..-..+++++|++.+-... .+++++|++-+.+|.- +
T Consensus 216 ~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgi~~~k~~~~~~~~Gn~~sas~~~~L~~---~ 288 (318)
T TIGR00747 216 HAVRKMGDVVEETLEANGLDPEDIDWFVPHQ----ANLRIIEALAKRLELDMSQVVKTVHKYGNTSAASIPLALDE---L 288 (318)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHcCCCHHHeeehHhhhCCHHHHHHHHHHHH---H
Confidence 4455567789999999999999999998653 2345667899999998432222 2344555565655543 3
Q ss_pred HhcC---CCCeEEEEEe
Q 010687 250 LQVH---RNTYAVVVST 263 (504)
Q Consensus 250 L~a~---~~~~aLVVs~ 263 (504)
++.+ +++++|+++.
T Consensus 289 ~~~~~~~~Gd~vll~~~ 305 (318)
T TIGR00747 289 LRTGRIKPGDLLLLVAF 305 (318)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3433 3567776664
No 147
>PRK04262 hypothetical protein; Provisional
Probab=90.79 E-value=0.55 Score=48.82 Aligned_cols=68 Identities=12% Similarity=0.198 Sum_probs=48.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee-----EEecCCcchHHHHHHHHHH
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS-----FNLGGMGCSAGVIAIDLAK 247 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~dl~g~gCsg~l~aL~lA~ 247 (504)
....++++++|+++|++++|||.+++.. ..+.+-..++++||++++-.. -+.+++++++-..+|.-+.
T Consensus 209 ~~~~~~i~~~L~~~gl~~~dId~~v~Hq----~n~~~~~~~~~~Lgl~~ek~~~~~~~~~~GNt~sAsi~~~L~~~~ 281 (347)
T PRK04262 209 KHIISAAKGLMEKLGLKPSDYDYAVFHQ----PNGKFPLRVAKMLGFTKEQVKPGLLTPYIGNTYSGSALLGLAAVL 281 (347)
T ss_pred HHHHHHHHHHHHHhCcCHHHhceeecCC----CchHHHHHHHHHcCCCHHHhhccchhhhhCChHHHHHHHHHHHHH
Confidence 4567789999999999999999988662 234455678999999744222 2566666666666665543
No 148
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems. It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.
Probab=90.68 E-value=0.88 Score=46.21 Aligned_cols=85 Identities=13% Similarity=0.223 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE---EecCCcchHHHHHHHHHHH
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF---NLGGMGCSAGVIAIDLAKD 248 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~g~gCsg~l~aL~lA~~ 248 (504)
+...+...++++++|+++|++++|||.++... ..+..-..+.+++|++++-... +++++++++.+.+|.-+
T Consensus 219 ~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lgl~~~~~~~~~~~~Gn~~sas~~~~L~~~-- 292 (320)
T cd00830 219 KFAVRLMPESIEEALEKAGLTPDDIDWFVPHQ----ANLRIIEAVAKRLGLPEEKVVVNLDRYGNTSAASIPLALDEA-- 292 (320)
T ss_pred HHHHHhhHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCcHHHHHHHHHHHHH--
Confidence 44566678899999999999999999988663 2345557789999997433222 23445555555555433
Q ss_pred HHhcC---CCCeEEEEEe
Q 010687 249 MLQVH---RNTYAVVVST 263 (504)
Q Consensus 249 lL~a~---~~~~aLVVs~ 263 (504)
++.+ +++++|+++.
T Consensus 293 -~~~~~~~~G~~vll~~~ 309 (320)
T cd00830 293 -IEEGKLKKGDLVLLLGF 309 (320)
T ss_pred -HHcCCCCCCCEEEEEEE
Confidence 4443 5688888774
No 149
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=90.20 E-value=1.2 Score=45.41 Aligned_cols=84 Identities=14% Similarity=0.152 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE---EecCCcchHHHHHHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF---NLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~g~gCsg~l~aL~lA~~l 249 (504)
.......++++++|+++|++++|||.++... ..+..-.++.+++|++.+-... +.++++|+..+..|+ ++
T Consensus 216 ~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~----~~~~~~~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~---~~ 288 (319)
T PRK09352 216 FAVRELAKVAREALEAAGLTPEDIDWLVPHQ----ANLRIIDATAKKLGLPMEKVVVTVDKYGNTSAASIPLALD---EA 288 (319)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHH---HH
Confidence 4455567899999999999999999998653 2345567799999997533222 244445555555553 44
Q ss_pred HhcC---CCCeEEEEEe
Q 010687 250 LQVH---RNTYAVVVST 263 (504)
Q Consensus 250 L~a~---~~~~aLVVs~ 263 (504)
++.+ +++++|+++.
T Consensus 289 ~~~g~~~~Gd~vll~s~ 305 (319)
T PRK09352 289 VRDGRIKRGDLVLLEGF 305 (319)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 4443 3567777664
No 150
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional
Probab=90.16 E-value=1.1 Score=47.68 Aligned_cols=93 Identities=15% Similarity=0.210 Sum_probs=58.9
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCC--------cchHHHHHHHHHHHHH
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGM--------GCSAGVIAIDLAKDML 250 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~lL 250 (504)
..|++++|+++|++|+|||.+-.+ ..+....-...+.||+.++-..+|.+|. |++|....++++++|-
T Consensus 299 ~~A~~~al~~AGl~~~DID~iei~----dafa~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~ 374 (400)
T PRK13359 299 APATQKLLARLGMTLDQFDVIELN----EAFASQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE 374 (400)
T ss_pred HHHHHHHHHHhCCCHHHcCcCccC----cHhHHHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh
Confidence 679999999999999999987633 1223334556778888433356677652 3455556666666664
Q ss_pred hcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEec
Q 010687 251 QVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSN 296 (504)
Q Consensus 251 ~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~ 296 (504)
.. ..++.|+ +.|.-|..+.|+||++
T Consensus 375 ~~-~~~~g~~--------------------~~c~~gG~g~a~~ie~ 399 (400)
T PRK13359 375 RT-GGRFALC--------------------TMCIGVGQGIAIAIER 399 (400)
T ss_pred hc-CCCeEEE--------------------EEcccCCceeEEEEEe
Confidence 32 2344433 3355566677777764
No 151
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional
Probab=90.05 E-value=1.2 Score=45.81 Aligned_cols=81 Identities=11% Similarity=0.144 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE---EecCCcchHHHHHHHHHHHHHhc
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF---NLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~---dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
...-++++++|+++|++++|||.+++... .+.....++++||++++-... +.++++|++...+|+-+ ++.
T Consensus 226 ~~~~~~i~~~L~~~g~~~~did~~~~hq~----~~~~~~~~~~~lgl~~~k~~~~l~~~Gn~~sasi~~~L~~~---~~~ 298 (326)
T CHL00203 226 FQVPAVIIKCLNALNISIDEVDWFILHQA----NKRILEAIANRLSVPNSKMITNLEKYGNTSAASIPLALDEA---IQN 298 (326)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHhCCCHHHhhhHHHhhCcHHHHHHHHHHHHH---HHh
Confidence 44667889999999999999999886632 244556799999997443222 34556666666666544 344
Q ss_pred C---CCCeEEEEEe
Q 010687 253 H---RNTYAVVVST 263 (504)
Q Consensus 253 ~---~~~~aLVVs~ 263 (504)
+ +++++|+++.
T Consensus 299 g~~~~Gd~vll~~~ 312 (326)
T CHL00203 299 NKIQPGQIIVLSGF 312 (326)
T ss_pred CCCCCCCEEEEEEE
Confidence 3 4567777663
No 152
>PRK06840 hypothetical protein; Validated
Probab=90.00 E-value=0.92 Score=46.80 Aligned_cols=81 Identities=16% Similarity=0.213 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee--EEecCCcchHHHHHHHHHHHHHhcC
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS--FNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~--~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
....++++++|+++|++++|||.++..- ..+..-..++++||++++-.. -+..+++|++.+.+|+ ++++++
T Consensus 237 ~~~~~~i~~~L~~~gl~~~did~~~~h~----~~~~~~~~~~~~Lgl~~~~~~~~~~~Gn~~sas~~~~L~---~~~~~~ 309 (339)
T PRK06840 237 PNFLKVIREALRKSGYTPKDIDYLAILH----MKRSAHIALLEGLGLTEEQAIYLDEYGHLGQLDQILSLH---LALEQG 309 (339)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEECC----cCHHHHHHHHHHcCCCHHHeEeHHhccchhhhhHHHHHH---HHHHcC
Confidence 3456899999999999999999987532 224445678999999743211 1455566666666664 334443
Q ss_pred ---CCCeEEEEEe
Q 010687 254 ---RNTYAVVVST 263 (504)
Q Consensus 254 ---~~~~aLVVs~ 263 (504)
+++++|+++.
T Consensus 310 ~~~~Gd~ill~~~ 322 (339)
T PRK06840 310 KLKDGDLVVLVSA 322 (339)
T ss_pred CCCCCCEEEEEEE
Confidence 4566666663
No 153
>PRK07851 acetyl-CoA acetyltransferase; Provisional
Probab=89.80 E-value=1.6 Score=46.61 Aligned_cols=85 Identities=11% Similarity=-0.076 Sum_probs=50.8
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhh
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNS 474 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~s 474 (504)
+|||.+=+|-.-....-...+.||+.++.+.+| -..--+||...++-...+.++..+=+-++|...+...-+.|-.-.+
T Consensus 321 ~did~~ei~d~f~~~~l~~le~lg~~~~pvN~~-GG~l~~Ghp~gasg~~~~~~~~~qL~~~~~~~g~~~~~~~gg~g~a 399 (406)
T PRK07851 321 DDIDLVEINEAFAAQVLPSARELGIDEDKLNVS-GGAIALGHPFGMTGARITTTLLNNLQTHDKTFGLETMCVGGGQGMA 399 (406)
T ss_pred HHCCeehhhhHHHHHHHHHHHHhCCCccccCCC-CChHhhcCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccChhhE
Confidence 889998777665444444558899877666432 3344589998888777777665532223444444433333333456
Q ss_pred eeeEee
Q 010687 475 AVWQAL 480 (504)
Q Consensus 475 av~r~~ 480 (504)
++++.+
T Consensus 400 ~~~e~~ 405 (406)
T PRK07851 400 MVLERL 405 (406)
T ss_pred EEEEec
Confidence 666643
No 154
>PRK09050 beta-ketoadipyl CoA thiolase; Validated
Probab=89.60 E-value=0.8 Score=48.79 Aligned_cols=70 Identities=13% Similarity=0.177 Sum_probs=46.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCC--------cchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGM--------GCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++|+|||++-++ ..++...-...+.||+.++-..+|.+|- |++|....++++++|
T Consensus 299 ~~~a~~~al~~Agl~~~DId~~ei~----D~f~~~~l~~~e~lg~~~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qL 374 (401)
T PRK09050 299 PAPATRKLLARLGLTIDQFDVIELN----EAFAAQGLAVLRQLGLADDDARVNPNGGAIALGHPLGMSGARLVLTALHQL 374 (401)
T ss_pred HHHHHHHHHHHcCCCHHHCCccccC----cHhHHHHHHHHHHcCCCCCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHH
Confidence 3579999999999999999987633 1233444556778998543456677752 344444556666666
Q ss_pred Hh
Q 010687 250 LQ 251 (504)
Q Consensus 250 L~ 251 (504)
-.
T Consensus 375 r~ 376 (401)
T PRK09050 375 ER 376 (401)
T ss_pred Hh
Confidence 43
No 155
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=89.53 E-value=1.2 Score=46.85 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHH-cCCCC-cce----eEEecCCcchHHHHHHHH
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNK-YKLRG-NIR----SFNLGGMGCSAGVIAIDL 245 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~-lGl~~-~~~----~~dl~g~gCsg~l~aL~l 245 (504)
+++.+.+.++++++|+++|++++|||.++..-.. +.+-..+.++ ||+.. .-. --+.++++|++...+|+.
T Consensus 267 ~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~----~~~~d~~~~~llg~~~~~~~~~~~~~~~GNt~sasi~~~L~~ 342 (372)
T PRK07515 267 KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQAN----INMNQLIGKKVLGRDATPEEAPVILDEYANTSSAGSIIAFHK 342 (372)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCC----HHHHHHHHHHhccCCCChhhceEeHHhcCCchhhHHHHHHHH
Confidence 4567778899999999999999999998876321 2233335566 56431 111 125677788888888877
Q ss_pred HHHHHhcCCCCeEEEEEe
Q 010687 246 AKDMLQVHRNTYAVVVST 263 (504)
Q Consensus 246 A~~lL~a~~~~~aLVVs~ 263 (504)
+.+-+ .+++++|+++.
T Consensus 343 ~~~~~--~~Gd~vll~~~ 358 (372)
T PRK07515 343 HSDDL--AAGDLGVICSF 358 (372)
T ss_pred HhccC--CCCCEEEEEEe
Confidence 64432 34567777663
No 156
>PRK08242 acetyl-CoA acetyltransferase; Validated
Probab=89.48 E-value=1.6 Score=46.50 Aligned_cols=54 Identities=13% Similarity=0.087 Sum_probs=38.1
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYT 449 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~ 449 (504)
+|||.|-+|-.-....-...+.||+.++++.++ -..--+||...++=...+.++
T Consensus 318 ~DID~~ei~daFa~~~l~~~e~lG~~~~~vN~~-GG~la~GHP~GAsG~~~~~~l 371 (402)
T PRK08242 318 DDIDLFELNEAFASVVLRFMQALDIPHDKVNVN-GGAIAMGHPLGATGAMILGTV 371 (402)
T ss_pred HHCCEEEecchhhHHHHHHHHHhCCCCcCCCcC-CCHHhcCCcHHHHHHHHHHHH
Confidence 899999999888777777889999988877542 233347777666544444433
No 157
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction. Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.
Probab=89.15 E-value=1.7 Score=42.37 Aligned_cols=78 Identities=15% Similarity=0.074 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCC---CcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLR---GNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~---~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
....++++++|+++|++++|||.++.. +.................+.. .....-.+.+.++++++..+..+..-++
T Consensus 145 ~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~ 224 (254)
T cd00327 145 EGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLE 224 (254)
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHHHHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHh
Confidence 345678999999999999999998766 333222222222222333331 0112234565666777766666655455
Q ss_pred cC
Q 010687 252 VH 253 (504)
Q Consensus 252 a~ 253 (504)
..
T Consensus 225 ~~ 226 (254)
T cd00327 225 HE 226 (254)
T ss_pred CC
Confidence 43
No 158
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III
Probab=89.06 E-value=2.1 Score=45.07 Aligned_cols=84 Identities=10% Similarity=0.145 Sum_probs=56.8
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee---EEecCCcchHHHHHHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS---FNLGGMGCSAGVIAIDLAKDM 249 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~---~dl~g~gCsg~l~aL~lA~~l 249 (504)
.+....-++++++|+++|++++|||.++.... -+.+-..++++||++++-.. -+.+++++++...+|+-+
T Consensus 277 ~~~~~~~~~i~~~L~~~gl~~~dId~~v~Hq~----n~~~~~~~~~~Lgl~~ek~~~~l~~~GNt~sAsi~~~L~~~--- 349 (379)
T PLN02326 277 FAVRCVPQVIESALQKAGLTAESIDWLLLHQA----NQRIIDAVAQRLGIPPEKVISNLANYGNTSAASIPLALDEA--- 349 (379)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECCC----CHHHHHHHHHHcCCCHHHeeecHhhcCcHHHHHHHHHHHHH---
Confidence 34555667899999999999999998886632 23445669999999854322 255666666666666544
Q ss_pred HhcC---CCCeEEEEEe
Q 010687 250 LQVH---RNTYAVVVST 263 (504)
Q Consensus 250 L~a~---~~~~aLVVs~ 263 (504)
++.+ +++++|+++.
T Consensus 350 ~~~g~~~~Gd~vll~~~ 366 (379)
T PLN02326 350 VRSGKVKKGDVIATAGF 366 (379)
T ss_pred HHcCCCCCCCEEEEEEE
Confidence 3433 4566666653
No 159
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase. Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.
Probab=88.38 E-value=2.5 Score=45.02 Aligned_cols=83 Identities=13% Similarity=0.028 Sum_probs=46.5
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCc--hhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEE-EEeechhHH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLP--EHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVW-QIAFGSGFK 471 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~--e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vl-li~fG~G~~ 471 (504)
+|||++-+|-.-....-...+.||+.+ +.+.++ --+--+||...++=...+.++..+=+-+.|...+ .+..|.|..
T Consensus 314 ~DID~~ei~D~f~~~~l~~~e~lG~~~~~~pvN~~-GG~la~GHp~gasG~~~~~e~~~qLr~~~~~~g~~~~c~~gG~g 392 (400)
T TIGR02430 314 DQFDVIELNEAFAAQALAVLRELGLADDDARVNPN-GGAIALGHPLGASGARLVLTALRQLERSGGRYALCTMCIGVGQG 392 (400)
T ss_pred HHCCCcccCcHHHHHHHHHHHHcCCCCCCCeECCC-CchHhccChHHHHHHHHHHHHHHHHHhcCCCEEEEEEccccChh
Confidence 899999998887766677788999854 344321 1122379987774444444433321113444433 344444433
Q ss_pred hhheeeEe
Q 010687 472 CNSAVWQA 479 (504)
Q Consensus 472 ~~sav~r~ 479 (504)
.+++++.
T Consensus 393 -~a~~~e~ 399 (400)
T TIGR02430 393 -IALAIER 399 (400)
T ss_pred -hEEEEEe
Confidence 4566653
No 160
>PRK07850 acetyl-CoA acetyltransferase; Provisional
Probab=88.26 E-value=3 Score=44.27 Aligned_cols=83 Identities=8% Similarity=-0.019 Sum_probs=51.4
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeechhHHhh
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQ-IAFGSGFKCN 473 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll-i~fG~G~~~~ 473 (504)
+|||.+=+|-.-....-...+.||++.+.+.++ --+-.+||...++=...+.++..+=+-+.|...+. +..|.|. -.
T Consensus 303 ~did~~ei~d~F~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~g~~~~c~~gg~-g~ 380 (387)
T PRK07850 303 GDIDLVEINEAFASVVLSWAQVHEPDMDKVNVN-GGAIALGHPVGSTGARLITTALHELERTDKSTALITMCAGGAL-ST 380 (387)
T ss_pred HHcCeeeecccchHHHHHHHHHcCCCCCCcCCC-CchhhcCCCcchhHHHHHHHHHHHHHhcCCCeEEEEEccccCc-ee
Confidence 899999999988776666778999987766542 23445899987776666555544322123333332 3334443 34
Q ss_pred heeeEe
Q 010687 474 SAVWQA 479 (504)
Q Consensus 474 sav~r~ 479 (504)
+++++.
T Consensus 381 a~~~e~ 386 (387)
T PRK07850 381 GTIIER 386 (387)
T ss_pred EEEEEe
Confidence 566654
No 161
>PRK08235 acetyl-CoA acetyltransferase; Provisional
Probab=87.99 E-value=2.1 Score=45.43 Aligned_cols=82 Identities=18% Similarity=0.097 Sum_probs=52.3
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeechhHHhh
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQ-IAFGSGFKCN 473 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll-i~fG~G~~~~ 473 (504)
+|||.+=+|-.-....-...+.||+.++.+.++ --.--+||...++=...+.++..+=+-+.|++.+. +..|.| .-.
T Consensus 309 ~did~~e~~d~f~~~~l~~~e~lg~~~~pvN~~-GG~la~Ghp~gasG~~~~~~l~~qL~~~~~~~g~~~~c~~gG-~g~ 386 (393)
T PRK08235 309 EDIDLFEINEAFAAVALASTEIAGIDPEKVNVN-GGAVALGHPIGASGARIIVTLIHELKRRGGGIGIAAICSGGG-QGD 386 (393)
T ss_pred HHCCeehhcchhHHHHHHHHHHhCCCcccCCcC-CchHHhCCcHHHHHHHHHHHHHHHHHhcCCCeEEEEEccccc-ceE
Confidence 899999888877666667788999988777543 23444888887776666665544322245566443 334444 345
Q ss_pred heeeE
Q 010687 474 SAVWQ 478 (504)
Q Consensus 474 sav~r 478 (504)
+++|+
T Consensus 387 a~~~e 391 (393)
T PRK08235 387 AVLIE 391 (393)
T ss_pred EEEEE
Confidence 56655
No 162
>PRK06205 acetyl-CoA acetyltransferase; Provisional
Probab=87.76 E-value=3.5 Score=43.96 Aligned_cols=84 Identities=14% Similarity=0.067 Sum_probs=49.3
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCc---hhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeechhH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLP---EHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQ-IAFGSGF 470 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll-i~fG~G~ 470 (504)
+|||.+-+|-.-....-...+.||+.+ +++.+| -..--+||...++=...+.++..+=+-+.|.+.+. +..|.|.
T Consensus 316 ~Did~~ei~d~f~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~Ghp~gatG~~~v~e~~~qL~~~~~~~gl~~~c~~gg~ 394 (404)
T PRK06205 316 DDIDLIELNEAFAAQVLAVLKEWGFGADDEERLNVN-GSGISLGHPVGATGGRILATLLRELQRRQARYGLETMCIGGGQ 394 (404)
T ss_pred HHCCEeeeccHHHHHHHHHHHHhCcCcccCCCcCCC-CCHHhhCCChhhhHHHHHHHHHHHHHhcCCCeEEEEEeccCCh
Confidence 899999999887766667778899876 345432 23344888876665555444433211123344333 3333333
Q ss_pred HhhheeeEee
Q 010687 471 KCNSAVWQAL 480 (504)
Q Consensus 471 ~~~sav~r~~ 480 (504)
-.+++++.+
T Consensus 395 -g~a~~~e~~ 403 (404)
T PRK06205 395 -GLAAVFERV 403 (404)
T ss_pred -hhEEEEEec
Confidence 356677654
No 163
>PRK07108 acetyl-CoA acetyltransferase; Provisional
Probab=87.66 E-value=2.2 Score=45.26 Aligned_cols=54 Identities=7% Similarity=-0.085 Sum_probs=35.6
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYT 449 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~ 449 (504)
+|||.+-+|-......-...+.||+.++++.+| -..-.+||...++=...+.++
T Consensus 308 ~Did~~ei~eafa~~~l~~~e~lg~~~~~vN~~-GG~~a~GHp~gatG~r~~~~l 361 (392)
T PRK07108 308 DDIDLWELNEAFAVQVLYCRDTLGIPMDRLNVN-GGAIAVGHPYGVSGARLTGHA 361 (392)
T ss_pred HHcCchHhhhHHHHHHHHHHHhcCCCccccCCC-CChHHhCcchhhhHHHHHHHH
Confidence 899999888665444444578899988877543 334447887776654444443
No 164
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]
Probab=87.43 E-value=1.2 Score=45.99 Aligned_cols=88 Identities=17% Similarity=0.222 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeE--EecCCcchHHHHHHHHH
Q 010687 169 AAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSF--NLGGMGCSAGVIAIDLA 246 (504)
Q Consensus 169 ~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~--dl~g~gCsg~l~aL~lA 246 (504)
+--+.+..++.++++++|+++|++++|||.++.. +.-..+-..+++++|++++-... +-.| ..++.-+-|.+.
T Consensus 216 ~vfk~av~~~~~~~~~~L~~~~l~~~dId~~vpH----Qan~ri~~~i~~~l~~~~~k~~~~~~~yG-NtsaAsiplaL~ 290 (323)
T COG0332 216 EVFKFAVRAMPKAIEEVLEKAGLTPEDIDWFVPH----QANLRIIEAIAKKLGIPEEKVVVTVDKYG-NTSAASIPLALD 290 (323)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEccc----cccHHHHHHHHHHcCCCHHHHhhHHHHhc-ccccchHHHHHH
Confidence 4566799999999999999999999999999844 33345667899999997543333 3333 344444334333
Q ss_pred HHHHhcC---CCCeEEEEE
Q 010687 247 KDMLQVH---RNTYAVVVS 262 (504)
Q Consensus 247 ~~lL~a~---~~~~aLVVs 262 (504)
. +++.+ +++++|+++
T Consensus 291 ~-~~~~g~ik~Gd~ill~~ 308 (323)
T COG0332 291 E-ALREGRIKPGDLVLLEA 308 (323)
T ss_pred H-HhhhCCCCCCCEEEEEe
Confidence 2 33344 345555444
No 165
>PRK07516 acetyl-CoA acetyltransferase; Provisional
Probab=86.60 E-value=5.4 Score=42.20 Aligned_cols=56 Identities=13% Similarity=-0.069 Sum_probs=41.4
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCch------------------hhhhhhhccccccccccchHHHHHHHHHH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLPE------------------HVEASRMTLHRFGNTSSSSIWYELAYTEA 451 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 451 (504)
+|||.+-+|-......-...+.||+.++ .+.+|=- +--+||...++=...+.++..
T Consensus 278 ~did~~e~~d~f~~~~~~~~e~lg~~~~G~~~~~~~~g~~~~~g~~pvN~sGG-~la~Ghp~gasG~~~~~e~~~ 351 (389)
T PRK07516 278 DDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGWTAKDGKLPVNPSGG-LKAKGHPIGATGVSMHVLAAM 351 (389)
T ss_pred HHCCEEEEecCCCHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeecCCCC-cccCCCCccHHHHHHHHHHHH
Confidence 8999999999998887778899999865 3322111 335999998887777776644
No 166
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated
Probab=85.71 E-value=1.7 Score=45.28 Aligned_cols=88 Identities=9% Similarity=0.101 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCC-c--c--eeEEecCCcchHHHHHHHHHHHHH
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRG-N--I--RSFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~-~--~--~~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
=..++++++|+++|++|+|||.|+.. +...+.....+..+.+-+|-.. . + ..-.++..+.+++...+-.+-..+
T Consensus 235 gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~ 314 (348)
T PRK06147 235 GLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEAALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAAS 314 (348)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHHHHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHH
Confidence 35688999999999999999998865 3322212222233444444211 1 1 111234334444444444444555
Q ss_pred hcC--CCCeEEEEEec
Q 010687 251 QVH--RNTYAVVVSTE 264 (504)
Q Consensus 251 ~a~--~~~~aLVVs~E 264 (504)
+.+ +..++||.++.
T Consensus 315 ~~g~~~g~~~L~~s~~ 330 (348)
T PRK06147 315 RKGYGPGPNVLCHLSD 330 (348)
T ss_pred HcCcCCCCcEEEEecC
Confidence 555 56789998854
No 167
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=85.70 E-value=2.5 Score=37.45 Aligned_cols=75 Identities=17% Similarity=0.320 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++++|||.+=++= .+....-...+.+|+.+ ..+|.+| .||+|....++++.+|
T Consensus 24 p~~A~~~al~~ag~~~~did~~Ei~E----aFA~~~l~~~~~lg~~~--~~vN~~GG~la~GHP~gasG~r~~~~l~~~L 97 (123)
T PF02803_consen 24 PVPAARKALERAGLTPDDIDVIEINE----AFAAQVLAFLEALGLDP--EKVNPNGGALALGHPLGASGARLVVELAHQL 97 (123)
T ss_dssp HHHHHHHHHHHHT--GGGESEEEE------SBHHHHHHHHHHHTTGG--GGBSTT--HHHH-BHTTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccchhhccc----hhhhHHHHhhccccccc--cccCcccccccccccccccccchhhhhHHHH
Confidence 35799999999999999999886652 12334455677788763 4556554 3677778888888887
Q ss_pred HhcCCCCeEE
Q 010687 250 LQVHRNTYAV 259 (504)
Q Consensus 250 L~a~~~~~aL 259 (504)
-+.+ .++.+
T Consensus 98 ~~~~-~~~gl 106 (123)
T PF02803_consen 98 RRRG-GRYGL 106 (123)
T ss_dssp HHHT-TSEEE
T ss_pred HHhc-hhhhh
Confidence 6643 34433
No 168
>PRK09052 acetyl-CoA acetyltransferase; Provisional
Probab=85.60 E-value=2.6 Score=44.83 Aligned_cols=92 Identities=14% Similarity=0.264 Sum_probs=56.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++|+|||++-.+ ..+....-...+.||+.+ ..+|.+| .|++|....+.++.+|
T Consensus 299 ~~~A~~~al~~Agi~~~did~~ei~----D~f~~~~l~~~e~lg~~~--~~vN~~GG~la~GHp~gasG~~~~~~~~~~L 372 (399)
T PRK09052 299 PIEAIPAALKQAGLKQDDLDWIELN----EAFAAQSLAVIRDLGLDP--SKVNPLGGAIALGHPLGATGAIRTATVVHGL 372 (399)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeC----cHHHHHHHHHHHHhCCCC--cccCCCCchhhcCchHHHHHHHHHHHHHHHH
Confidence 4689999999999999999988633 122333445567788753 2344443 2455555666666665
Q ss_pred HhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEec
Q 010687 250 LQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSN 296 (504)
Q Consensus 250 L~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~ 296 (504)
-..+ .++.| .+.|.-|-.++|+||++
T Consensus 373 ~~~~-~~~g~--------------------~~~c~~gg~g~a~~~e~ 398 (399)
T PRK09052 373 RRTN-LKYGM--------------------VTMCVGTGMGAAGIFER 398 (399)
T ss_pred HhcC-CCeEE--------------------EEEcccCCceeEEEEEe
Confidence 4432 23332 23455566677777764
No 169
>PRK06445 acetyl-CoA acetyltransferase; Provisional
Probab=85.25 E-value=2.6 Score=44.75 Aligned_cols=67 Identities=18% Similarity=0.272 Sum_probs=47.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++|+|||.+=++- .++...-+..+.||+.++ .+|.+| .||+|...-++++.+|
T Consensus 294 ~~~a~~~al~~Agl~~~dId~~e~~d----~f~~~~l~~~e~lg~~~~--~vN~~GG~la~Ghp~gatG~~~v~e~~~qL 367 (394)
T PRK06445 294 PVPASKKALEKAGLSVKDIDLWEINE----AFAVVVLYAIKELGLDPE--TVNIKGGAIAIGHPLGATGARIVGTLARQL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecc----cchHHHHHHHHHhCCCcc--ccCCCCCHHHcCCCccchHHHHHHHHHHHH
Confidence 46799999999999999999886542 234445566778887632 355543 3667777777777777
Q ss_pred H
Q 010687 250 L 250 (504)
Q Consensus 250 L 250 (504)
-
T Consensus 368 ~ 368 (394)
T PRK06445 368 Q 368 (394)
T ss_pred H
Confidence 5
No 170
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed
Probab=85.21 E-value=6.6 Score=41.61 Aligned_cols=82 Identities=16% Similarity=-0.038 Sum_probs=46.0
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCc---hhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeec-hhH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLP---EHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFG-SGF 470 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG-~G~ 470 (504)
+|||.+=+|-.-....-...+.||+-+ +.+.++ --+--+||...++=.....++..+-+-+.+.+.+.-..| .|.
T Consensus 300 ~DId~~El~d~F~~~~l~~~e~lg~~~~~~~~vN~~-GG~la~GhP~GAtG~~~v~~l~~~L~~~~~~~gl~~~~~g~G~ 378 (387)
T PRK08947 300 SDIDVFELNEAFAAQSLPCLKDLGLLDKMDEKVNLN-GGAIALGHPLGCSGARISTTLLNLMERKDAQFGLATMCIGLGQ 378 (387)
T ss_pred HHCCEEEecccchHHHHHHHHHcCCCCCCCCCcCCC-CchhhcCCCccccHHHHHHHHHHHHHhcCCCEEEEEEeecccc
Confidence 899999999998888888889999844 455432 223346777555443333333322111333444433333 333
Q ss_pred HhhheeeE
Q 010687 471 KCNSAVWQ 478 (504)
Q Consensus 471 ~~~sav~r 478 (504)
..+++++
T Consensus 379 -g~a~~~e 385 (387)
T PRK08947 379 -GIATVFE 385 (387)
T ss_pred -eeEEEEE
Confidence 3445554
No 171
>PRK09051 beta-ketothiolase; Provisional
Probab=85.18 E-value=3.7 Score=43.67 Aligned_cols=68 Identities=12% Similarity=0.228 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCC--------cchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGM--------GCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~--------gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++|+|||++=++- .++...-...+.||+.+ ..+|.+|- |++|....+.++++|
T Consensus 294 ~~~a~~~al~~agi~~~did~~ei~d----~f~~~~~~~~e~lg~~~--~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L 367 (394)
T PRK09051 294 PVPATQKALERAGLTVADLDVIEANE----AFAAQACAVTRELGLDP--AKVNPNGSGISLGHPVGATGAIITVKALYEL 367 (394)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecC----ccHHHHHHHHHHhCCCc--cccCCCccHHHhcchHHHHHHHHHHHHHHHH
Confidence 36799999999999999999886541 23444556678899853 46666652 334444455555555
Q ss_pred Hh
Q 010687 250 LQ 251 (504)
Q Consensus 250 L~ 251 (504)
-+
T Consensus 368 ~~ 369 (394)
T PRK09051 368 QR 369 (394)
T ss_pred Hh
Confidence 43
No 172
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]
Probab=85.01 E-value=3.4 Score=43.44 Aligned_cols=82 Identities=11% Similarity=0.155 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC-----CcceeE-EecCCcchHHHHHHHHHHH
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR-----GNIRSF-NLGGMGCSAGVIAIDLAKD 248 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~-----~~~~~~-dl~g~gCsg~l~aL~lA~~ 248 (504)
..-...|+++.+++.|.+|+|.|.+++.. |.|-+....+..+|.+ +..... .++++.|.+...+| |.-
T Consensus 208 ~~~~~~a~~~~~~k~gls~~dfdy~vfH~----P~~k~~~ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~L--as~ 281 (377)
T COG3425 208 FKHVENAAKGYMEKTGLSPDDFDYIVFHQ----PNGKFPKKAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGL--ASL 281 (377)
T ss_pred HHHHHHHHHHHHHHhCCChhhhCeEEecC----CCCchHHHHHHHhCccHhhcCccchhhhhcCcccchhHHHHH--HHH
Confidence 34466799999999999999999999875 5566666777777665 333333 58889999888665 343
Q ss_pred HHhcC-CCCeEEEEE
Q 010687 249 MLQVH-RNTYAVVVS 262 (504)
Q Consensus 249 lL~a~-~~~~aLVVs 262 (504)
|=++. +++++|+++
T Consensus 282 L~~a~~~G~rIl~~S 296 (377)
T COG3425 282 LDNAKLPGDRILLFS 296 (377)
T ss_pred HhhcCCCCCEEEEEe
Confidence 43344 456666654
No 173
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed
Probab=84.80 E-value=5 Score=43.10 Aligned_cols=84 Identities=12% Similarity=-0.044 Sum_probs=47.4
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcC-----------------CCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCC
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQ-----------------LLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRR 457 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~ 457 (504)
+|||.+-+|-.-....-...+.|+ ++.+.+.++ --+--+||...++=...+.++..+=+-+.
T Consensus 327 ~DiD~~Ei~d~Fa~~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gasG~~~~~e~~~qLrg~~ 405 (428)
T PRK08963 327 ADLTLIDMHEAFAAQTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVL-GGSIAYGHPFAATGARMITQTLHELRRRG 405 (428)
T ss_pred HHCCEEEEccccHHHHHHHHHHhcCchhhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHHHHhhcC
Confidence 899999999987655444444442 333344332 12333788876666666555544322246
Q ss_pred CCEEEEEeechhHHhhheeeEe
Q 010687 458 GNRVWQIAFGSGFKCNSAVWQA 479 (504)
Q Consensus 458 Gd~Vlli~fG~G~~~~sav~r~ 479 (504)
|++.+...-+.|-...+++++.
T Consensus 406 g~~gl~~~c~ggG~g~a~~ie~ 427 (428)
T PRK08963 406 GGLGLTTACAAGGLGAAMVLEV 427 (428)
T ss_pred CCEEEEEEccccChhhEEEEEe
Confidence 6776654444443446666664
No 174
>PRK06366 acetyl-CoA acetyltransferase; Provisional
Probab=84.68 E-value=4.8 Score=42.65 Aligned_cols=91 Identities=12% Similarity=0.055 Sum_probs=53.6
Q ss_pred HHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccch---HHHHHHHHHHcCC
Q 010687 379 KKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSS---IWYELAYTEAKGR 454 (504)
Q Consensus 379 ~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSas---i~~~L~~~~~~g~ 454 (504)
+++++ ..+. .+|||.+=+|-.-....-...|.||++.+++.+|=- +--+||-..+| +..+|.+.++.
T Consensus 292 ~~al~~Agl~------~~DiDv~Ei~daFa~~~l~~le~lgl~g~~vN~~GG-~la~GHP~GatG~~~~~~l~~qL~~-- 362 (388)
T PRK06366 292 RKLLEKQNKS------IDYYDLVEHNEAFSIASIIVRDQLKIDNERFNVNGG-AVAIGHPIGNSGSRIIVTLINALKT-- 362 (388)
T ss_pred HHHHHHcCCC------HHHcceeeccchhHHHHHHHHHHhCCCCCccCCCCc-hhhhCCCcCCCHHHHHHHHHHHHHh--
Confidence 45665 3444 389999999999888777888999999888876422 23366664444 33333333332
Q ss_pred CCCCCEE-EEEeechhHHhhheeeEee
Q 010687 455 MRRGNRV-WQIAFGSGFKCNSAVWQAL 480 (504)
Q Consensus 455 i~~Gd~V-lli~fG~G~~~~sav~r~~ 480 (504)
+.|... ..+..|.|. -.+++++..
T Consensus 363 -~~~~~g~~~~c~~gg~-g~a~~~e~~ 387 (388)
T PRK06366 363 -RHMKTGLATLCHGGGG-AHTLTLEMV 387 (388)
T ss_pred -cCCCeEEEEEecccCh-hhEEEEEec
Confidence 222232 233344443 356677654
No 175
>PRK05656 acetyl-CoA acetyltransferase; Provisional
Probab=84.52 E-value=2 Score=45.56 Aligned_cols=50 Identities=10% Similarity=0.114 Sum_probs=34.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG 233 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g 233 (504)
...|++++|+++|++|+|||.+-++- ..+...-...+.||+.. ..+|++|
T Consensus 293 ~~~a~~~al~~agl~~~dId~~e~~d----~f~~~~~~~~e~lg~~~--~~vn~~G 342 (393)
T PRK05656 293 PVSATRRCLDKAGWSLAELDLIEANE----AFAAQSLAVGKELGWDA--AKVNVNG 342 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecC----ccHHHHHHHHHHhCCCC--ccCCcCC
Confidence 35799999999999999999887641 13344455677888752 2345553
No 176
>PLN02287 3-ketoacyl-CoA thiolase
Probab=84.43 E-value=2.6 Score=45.68 Aligned_cols=96 Identities=16% Similarity=0.241 Sum_probs=60.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++|+|||.+=++ ..+....-+-.+.||+.+ ..+|++| .|++|....+.++.+|
T Consensus 333 ~~~A~~~al~~Agl~~~DID~~Ei~----daFa~~~l~~~e~lG~~~--~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL 406 (452)
T PLN02287 333 PAVAIPAAVKAAGLELDDIDLFEIN----EAFASQFVYCCKKLGLDP--EKVNVNGGAIALGHPLGATGARCVATLLHEM 406 (452)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEec----chHHHHHHHHHHHcCCCc--cccCCCCcHHhccCcHHHHHHHHHHHHHHHH
Confidence 4689999999999999999988543 112222233456778753 3455443 3566666666666666
Q ss_pred HhcCC-CCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEecccc
Q 010687 250 LQVHR-NTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 250 L~a~~-~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~~~~ 299 (504)
-+.+. .++. +.+.|.-|-.+.|+||++.+.
T Consensus 407 ~~~~~~~~~g--------------------l~~~c~ggG~g~a~~ie~~~~ 437 (452)
T PLN02287 407 KRRGKDCRFG--------------------VVSMCIGTGMGAAAVFERGDS 437 (452)
T ss_pred HhcCCCCCee--------------------EEEEccccCceeEEEEEecCc
Confidence 54331 0232 234566677788899998664
No 177
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs. PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.
Probab=84.29 E-value=2.8 Score=43.71 Aligned_cols=88 Identities=13% Similarity=0.085 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHHHHHHhC--CCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcc------eeEEecCCcchHHHHHH
Q 010687 172 EEAEQVMFGALDNLFANT--NVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNI------RSFNLGGMGCSAGVIAI 243 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~a--gi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~------~~~dl~g~gCsg~l~aL 243 (504)
+.+.....++++++|+++ |++++|||.+++... ...+-..++++||++++- ..-+.+++++++...+|
T Consensus 255 ~~~~~~~~~~i~~~L~~~~~g~~~~did~~~~H~~----~~~i~~~v~~~lgl~~~~~~~s~~~l~~~GN~~sasi~~~L 330 (361)
T cd00831 255 RLVEKNLERVLRKLLARLGIGLFKLAFDHWCVHPG----GRAVLDAVEKALGLSPEDLEASRMVLRRYGNMSSSSVLYVL 330 (361)
T ss_pred HHHHHHHHHHHHHHhccccCCCccccceEEEECCC----ChHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchhccHHHHH
Confidence 345566778899999999 999999999887642 234456689999997432 12367777777777777
Q ss_pred HHHHHHHhcCCCCeEEEEEe
Q 010687 244 DLAKDMLQVHRNTYAVVVST 263 (504)
Q Consensus 244 ~lA~~lL~a~~~~~aLVVs~ 263 (504)
+-+.+-=+-.+++++|+++.
T Consensus 331 ~~~~~~g~~~~Gd~vll~~~ 350 (361)
T cd00831 331 AYMEAKGRVKRGDRGLLIAF 350 (361)
T ss_pred HHHHHhCCCCCCCEEEEEEE
Confidence 65533111114567777663
No 178
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA. This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.
Probab=84.04 E-value=12 Score=39.65 Aligned_cols=81 Identities=16% Similarity=0.028 Sum_probs=47.8
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCc---hhhhhhhhccccccccccc---hHHHHHHHHHHcCCCCCCCEEEEEeech
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLP---EHVEASRMTLHRFGNTSSS---SIWYELAYTEAKGRMRRGNRVWQIAFGS 468 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~---e~~~~S~~~l~r~GNtsSa---si~~~L~~~~~~g~i~~Gd~Vlli~fG~ 468 (504)
+|||.+=+|-.-....-...+.||+-+ +++.+|= -+--+||...+ .+...|.+...+ +.+.+.+....|.
T Consensus 298 ~DId~~Ei~daFa~~~l~~~e~lg~~~~g~~~vN~~G-G~la~GhP~GATG~r~v~~l~~~l~~---~~~~~Gl~~~~~g 373 (385)
T TIGR02445 298 SDIDVFELNEAFAAQALPCLKDLGLLDKMDEKVNLNG-GAIALGHPLGCSGARISTTLLNLMEQ---KDATFGLATMCIG 373 (385)
T ss_pred HHcCEEEEccccHHHHHHHHHHcCCCCCCCCCcCCCC-chhhcCCCccccHHHHHHHHHHHHHh---cCCCeEEEEEecc
Confidence 899999999988777777889999843 4555432 23335665444 444455544432 3344444433333
Q ss_pred hHHhhheeeEe
Q 010687 469 GFKCNSAVWQA 479 (504)
Q Consensus 469 G~~~~sav~r~ 479 (504)
|-.-.+++++.
T Consensus 374 ~g~g~a~~~e~ 384 (385)
T TIGR02445 374 LGQGIATVFER 384 (385)
T ss_pred cChhheEEEEe
Confidence 33345666664
No 179
>PRK07661 acetyl-CoA acetyltransferase; Provisional
Probab=83.18 E-value=3.4 Score=43.92 Aligned_cols=92 Identities=20% Similarity=0.379 Sum_probs=56.6
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++|+|||.+-++- .++...-.-.+.||+.+ ..+|.+| .|++|....++++.+|
T Consensus 291 ~~~a~~~al~~agl~~~did~~ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL 364 (391)
T PRK07661 291 PIAAIPKALKLAGLELSDIGLFELNE----AFASQSIQVIRELGLDE--EKVNVNGGAIALGHPLGCTGAKLTLSLIHEM 364 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCC----HHHHHHHHHHHHcCCCC--CCCCCCCChHHhCCcHHHHHHHHHHHHHHHH
Confidence 46899999999999999999887441 12333334446788742 2344443 2556666666666666
Q ss_pred HhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEec
Q 010687 250 LQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSN 296 (504)
Q Consensus 250 L~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~ 296 (504)
-+.+ .++.|+ +.|.-|..+.|+||++
T Consensus 365 ~~~~-~~~g~~--------------------~~c~~gg~g~a~~~e~ 390 (391)
T PRK07661 365 KRRN-EQFGIV--------------------TMCIGGGMGAAGVFEL 390 (391)
T ss_pred HhcC-CCeEEE--------------------EEccccChhhEEEEEe
Confidence 5433 233332 3455566677777764
No 180
>PRK08257 acetyl-CoA acetyltransferase; Validated
Probab=82.43 E-value=3.3 Score=45.42 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=36.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCc-ceeEEecC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGN-IRSFNLGG 233 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~-~~~~dl~g 233 (504)
+..|++++++++|++++|||++=+.. .+|...-+..+.||+.++ -..+|++|
T Consensus 294 ~~~aa~~a~~~AGi~~~Did~~elyd----cF~~~~~~~~E~LGl~~~g~~pvN~sG 346 (498)
T PRK08257 294 IRAAGRRALALAGLGIDDIDAFDLYS----CFPSAVQVAARELGLDLDDPRPLTVTG 346 (498)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEecc----CCHHHHHHHHHHcCcCCCCCCCcCCCc
Confidence 35699999999999999999885432 134545666788998643 23566654
No 181
>PRK06954 acetyl-CoA acetyltransferase; Provisional
Probab=82.35 E-value=2.1 Score=45.46 Aligned_cols=92 Identities=15% Similarity=0.247 Sum_probs=53.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 249 (504)
...|++++|+++|++|+|||.+=++- .+....-.-.+.||+.+ ..+|++| .|++|....++++.+|
T Consensus 297 ~~~a~~~al~~agl~~~Did~~ei~d----~fa~~~l~~~e~lg~~~--~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL 370 (397)
T PRK06954 297 PVGAIRKLFEKNGWRAAEVDLFEINE----AFAVVTMAAMKEHGLPH--EKVNVNGGACALGHPIGASGARILVTLIGAL 370 (397)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEehhh----HHHHHHHHHHHHhCCCc--ccCCcCCChHHhcccHHHHHHHHHHHHHHHH
Confidence 36799999999999999999884321 11122223346788753 3455554 2445555555666555
Q ss_pred HhcCCCCeEEEEEeccCcCCCcCCCCcCccccccccccccEEEEEec
Q 010687 250 LQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSN 296 (504)
Q Consensus 250 L~a~~~~~aLVVs~E~~S~~~~~~~dr~~l~~~~lfgDGAaA~LLs~ 296 (504)
-..+ .++. +.+.|.-|..++|+||++
T Consensus 371 ~~~~-g~~~--------------------v~~~c~~gg~g~a~~~e~ 396 (397)
T PRK06954 371 RARG-GKRG--------------------VASLCIGGGEATAMGIEL 396 (397)
T ss_pred HhcC-CCeE--------------------EEEEccccchhhEEEEEe
Confidence 4322 2232 224466666677777764
No 182
>PLN03169 chalcone synthase family protein; Provisional
Probab=81.77 E-value=4.9 Score=42.63 Aligned_cols=88 Identities=14% Similarity=0.212 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee------EEecCCcchHHHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS------FNLGGMGCSAGVIAIDLA 246 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~------~dl~g~gCsg~l~aL~lA 246 (504)
.+..-.-+.++++|+++|++++|||.+.+...+.. ..+-..++++||++++-.. -+.+++++++-..+|+.+
T Consensus 278 ~~~~~~~~~i~~~L~~~gl~~~did~~~~v~Hq~n--~~il~~v~~~Lgl~~ek~~~s~~~l~~~GNtsSasip~~L~~~ 355 (391)
T PLN03169 278 KIEDNIEGFCKKLMKKAGLVEKDYNDLFWAVHPGG--PAILNRLEKKLKLAPEKLECSRRALMDYGNVSSNTIVYVLEYM 355 (391)
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCcceEEecCCC--HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCchHhHHHHHHHHH
Confidence 34555666789999999999999994433322222 4566779999999854322 267778888888888655
Q ss_pred HHH--Hh-cCCCCeEEEEE
Q 010687 247 KDM--LQ-VHRNTYAVVVS 262 (504)
Q Consensus 247 ~~l--L~-a~~~~~aLVVs 262 (504)
..- ++ ..+++++|+++
T Consensus 356 ~~~~~~~~~~~gd~~ll~a 374 (391)
T PLN03169 356 REELKKKGEEDEEWGLILA 374 (391)
T ss_pred HHhhcccCCCCCcEEEEEE
Confidence 421 11 11345666555
No 183
>PRK06690 acetyl-CoA acetyltransferase; Provisional
Probab=79.35 E-value=5.6 Score=41.83 Aligned_cols=70 Identities=17% Similarity=0.186 Sum_probs=48.6
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEec--------CCcchHHHHHHHHHHH
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLG--------GMGCSAGVIAIDLAKD 248 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~--------g~gCsg~l~aL~lA~~ 248 (504)
-...|++++|+++|++++|||.+..+- ..........+.||+.+ ..+|.+ -.|++|......+..+
T Consensus 259 ~~~~a~~~al~~Agl~~~Did~~ei~e----afa~~~~~~~e~lgl~~--~~vn~~GG~la~Ghp~GatG~~~~~~~~~q 332 (361)
T PRK06690 259 GPIFAVNKLLNEMNMKVEDIDYFEINE----AFASKVVACAKELQIPY--EKLNVNGGAIALGHPYGASGAMLVTRLFYQ 332 (361)
T ss_pred HHHHHHHHHHHHcCCCHHHcCEeeecc----hhHHHHHHHHHhcCCCc--hhcccCCcHHhccCchhhhHHHHHHHHHHH
Confidence 356799999999999999999986641 23344455677888863 244443 1367777777777777
Q ss_pred HHhc
Q 010687 249 MLQV 252 (504)
Q Consensus 249 lL~a 252 (504)
+-+.
T Consensus 333 l~~~ 336 (361)
T PRK06690 333 AKRE 336 (361)
T ss_pred HHHh
Confidence 7554
No 184
>PRK06289 acetyl-CoA acetyltransferase; Provisional
Probab=79.16 E-value=17 Score=38.64 Aligned_cols=86 Identities=15% Similarity=0.028 Sum_probs=52.6
Q ss_pred HHHHHH-hhccCCccCcccccCEEEEcCCCHHHHHHHHHHcCCCch------------------hhhhhhhccccccccc
Q 010687 378 AKKFSN-AKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPE------------------HVEASRMTLHRFGNTS 438 (504)
Q Consensus 378 ~~~vl~-~~~~~~~p~~~~did~~~~Hq~g~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNts 438 (504)
.+++++ .++. .+|||.+-+|-.-....-...|.||+.+. .+.+| --+--+||..
T Consensus 282 a~~a~~~Agi~------~~Didv~el~D~fa~~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G~lpvN~~-GG~la~Ghp~ 354 (403)
T PRK06289 282 VLDAYRRAGVG------LDDLDGFEVHDCFTPSEYLAIDHIGLTGPGESWKAIENGEIAIGGRLPINPS-GGLIGGGHPV 354 (403)
T ss_pred HHHHHHHcCCC------HHHCeEEeeeccchHHHHHHHHHcCCCCCCcHHHHHhcCCcccCCCeeEcCC-CCccccCCCc
Confidence 355554 3444 38999999999988888888899998763 23221 1123389987
Q ss_pred cchHHHHHHHHHHc--C-----CCCCCCEEEEEeechhH
Q 010687 439 SSSIWYELAYTEAK--G-----RMRRGNRVWQIAFGSGF 470 (504)
Q Consensus 439 Sasi~~~L~~~~~~--g-----~i~~Gd~Vlli~fG~G~ 470 (504)
.++=...+.++..+ | .++..+..+..+.|.|.
T Consensus 355 gatG~~~~~e~~~QLrg~ag~~Qv~~~~~~l~~~~gg~~ 393 (403)
T PRK06289 355 GASGVRMLLDAAKQVTGTAGDYQVEGAKTFGTLNIGGST 393 (403)
T ss_pred cchHHHHHHHHHHHHhccccCccCCchheEEEEecCccc
Confidence 76666666665442 2 12223445556666543
No 185
>PRK08131 acetyl-CoA acetyltransferase; Provisional
Probab=78.24 E-value=13 Score=39.70 Aligned_cols=54 Identities=13% Similarity=-0.108 Sum_probs=33.6
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCc--hhhhhhhhccccccccccchHHHHHHHH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLP--EHVEASRMTLHRFGNTSSSSIWYELAYT 449 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~--e~~~~S~~~l~r~GNtsSasi~~~L~~~ 449 (504)
+|||.+=+|-.-....-...+.||+.. .++.+| --+--+||...++=...+.++
T Consensus 314 ~did~~ei~d~Fa~~~l~~~e~lg~~~~~~~vN~~-GG~la~GhP~gAtG~~~~~el 369 (401)
T PRK08131 314 DDMDIIEINEAFASQVLGCLKGLGVDFDDPRVNPN-GGAIAVGHPLGASGARLALTA 369 (401)
T ss_pred HHCCeehhccHHHHHHHHHHHHcCCCCCCCCccCC-ccHHhcCCchhhhHHHHHHHH
Confidence 899999998877655545678899853 344332 122248888765544444443
No 186
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes. They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.
Probab=77.53 E-value=8.4 Score=39.08 Aligned_cols=87 Identities=11% Similarity=0.129 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-chHHHHHHHcCCCC-cce------eEEecCCcchHHHH
Q 010687 170 AREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-SLSAMIVNKYKLRG-NIR------SFNLGGMGCSAGVI 241 (504)
Q Consensus 170 ~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-s~a~~I~~~lGl~~-~~~------~~dl~g~gCsg~l~ 241 (504)
..+.+.....++++++|++.|++ +|||.++.... .. ..-..+.++++++. ++. .-++++++|+....
T Consensus 217 ~~~~~~~~~~~~~~~~l~~~~~~-~~i~~~~~h~~----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~Gn~~sa~~~~ 291 (324)
T cd00827 217 VFEAAHKLIAKVVRKALDRAGLS-EDIDYFVPHQP----NGKKILEAVAKKLGGPPEKASQTRWILLRRVGNMYAASILL 291 (324)
T ss_pred hHHHHhHHHHHHHHHHHHHcccc-cccceeeccCc----hHHHHHHHHHHHccchHhhhccchhhHHHHhCchHHHHHHH
Confidence 44567778889999999999999 99998775532 22 56677899999741 111 22456666666666
Q ss_pred HHHHHHHHHhcC---CCCeEEEEEec
Q 010687 242 AIDLAKDMLQVH---RNTYAVVVSTE 264 (504)
Q Consensus 242 aL~lA~~lL~a~---~~~~aLVVs~E 264 (504)
+|+-+ +..+ +++++|+++.-
T Consensus 292 ~L~~~---~~~~~~~~Gd~vl~~~~G 314 (324)
T cd00827 292 GLASL---LESGKLKAGDRVLLFSYG 314 (324)
T ss_pred HHHHH---HhcCCCCCCCEEEEEEec
Confidence 66544 3333 46788887754
No 187
>PRK08170 acetyl-CoA acetyltransferase; Provisional
Probab=76.80 E-value=11 Score=40.33 Aligned_cols=19 Identities=16% Similarity=0.223 Sum_probs=15.8
Q ss_pred cccccccccEEEEEecccc
Q 010687 281 PNCLFRVGGSAVLLSNKAK 299 (504)
Q Consensus 281 ~~~lfgDGAaA~LLs~~~~ 299 (504)
..|..+|||+|+||.+.+.
T Consensus 262 ~~s~~~DGAaA~vl~s~e~ 280 (426)
T PRK08170 262 NSSQITDGACWLLLASEEA 280 (426)
T ss_pred ccCCCCCceEEEEEecHHH
Confidence 4578899999999998654
No 188
>PRK07801 acetyl-CoA acetyltransferase; Provisional
Probab=76.78 E-value=5.1 Score=42.31 Aligned_cols=67 Identities=13% Similarity=0.222 Sum_probs=43.5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHHH
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDML 250 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~lL 250 (504)
..|++++++++|++|+|||++=.+ ..+....-+..+.||+.+ ..+|.+| .|++|....++++++|-
T Consensus 283 ~~a~~~a~~~agi~~~did~~e~~----d~Fa~~~~~~~e~lG~~~--~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~ 356 (382)
T PRK07801 283 IPATRYALEKTGLSIDDIDVVEIN----EAFAPVVLAWLKETGADP--AKVNPNGGAIALGHPLGATGAKLMTTLLHELE 356 (382)
T ss_pred HHHHHHHHHHcCCCHHHcCEeeec----ccchHHHHHHHHHhCCCc--hhcCCCcchhhhcCcHHHHHHHHHHHHHHHHH
Confidence 468999999999999999988443 122334455677788764 3566665 13444445555555554
Q ss_pred h
Q 010687 251 Q 251 (504)
Q Consensus 251 ~ 251 (504)
.
T Consensus 357 ~ 357 (382)
T PRK07801 357 R 357 (382)
T ss_pred h
Confidence 4
No 189
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=76.55 E-value=4.9 Score=42.47 Aligned_cols=42 Identities=12% Similarity=0.177 Sum_probs=29.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
...|++++++++|++|+|||.+-..- ..+....+..+.||+.
T Consensus 287 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~~~~~e~lg~~ 328 (386)
T cd00751 287 PVPAIPKALKRAGLTLDDIDLIEINE----AFAAQALACLKELGLD 328 (386)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEeec----hhHHHHHHHHHHhCCC
Confidence 35899999999999999999876431 1122334456778875
No 190
>KOG1390 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=75.83 E-value=3.5 Score=42.21 Aligned_cols=80 Identities=24% Similarity=0.204 Sum_probs=54.1
Q ss_pred ccccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccc---cccchHHHHHHHHHHcCCCCCCCE-EEEEeechh
Q 010687 394 KLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGN---TSSSSIWYELAYTEAKGRMRRGNR-VWQIAFGSG 469 (504)
Q Consensus 394 ~~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GN---tsSasi~~~L~~~~~~g~i~~Gd~-Vlli~fG~G 469 (504)
.+|+|+|=++-.-..+.-...|.||++|+++.. .----..|| +|.+.+...|.+.+++ +.|.+ |.-+.-|.|
T Consensus 311 ~sdVd~~EiNEAFs~v~lA~iK~LgldP~kVNv-~GGAValGHPlG~SGaRi~~tL~~~L~~---~~g~~GvAaiCnGGG 386 (396)
T KOG1390|consen 311 QSDVDYWEINEAFSVVVLANIKKLGLDPSKVNV-HGGAVALGHPLGMSGARILVTLLHTLEQ---KGGKIGVAAICNGGG 386 (396)
T ss_pred hhhhhHHhhhhhhhHHHHHHHHHhCCCHhhccC-CCceeecCCCcCCcchhHHHHHHHHHHh---hCCceeEEEEecCCC
Confidence 389999999888888888899999999999842 111112555 6778899999998875 23443 333444555
Q ss_pred HHhhheeeE
Q 010687 470 FKCNSAVWQ 478 (504)
Q Consensus 470 ~~~~sav~r 478 (504)
-. .+++++
T Consensus 387 ga-sa~vie 394 (396)
T KOG1390|consen 387 GA-SAMVIE 394 (396)
T ss_pred ce-eeEEEe
Confidence 32 355554
No 191
>PRK06504 acetyl-CoA acetyltransferase; Provisional
Probab=75.62 E-value=6.6 Score=41.73 Aligned_cols=69 Identities=19% Similarity=0.246 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHH
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKD 248 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~ 248 (504)
-...|++++++++|++|+|||++=++- .++...-+..+.||+.+. .+|.+| .||+|.-....++.+
T Consensus 289 ~~~~a~~~a~~~agl~~~Did~~Ei~d----~Fa~~~l~~~e~lG~~~~--pvN~~GG~la~Ghp~gatG~r~~~~l~~~ 362 (390)
T PRK06504 289 APLPATERALKKAGMKIDDIDLYEVNE----AFASVPLAWLKATGADPE--RLNVNGGAIALGHPLGASGTKLMTTLVHA 362 (390)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEecc----cchHHHHHHHHHhCCCCC--CcCCCCcHHhcCCCcchhHHHHHHHHHHH
Confidence 345699999999999999999885541 123444566788998743 467665 133343344555555
Q ss_pred HHh
Q 010687 249 MLQ 251 (504)
Q Consensus 249 lL~ 251 (504)
|-+
T Consensus 363 lr~ 365 (390)
T PRK06504 363 LKQ 365 (390)
T ss_pred HHh
Confidence 543
No 192
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade. This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.
Probab=75.32 E-value=7.9 Score=40.84 Aligned_cols=73 Identities=12% Similarity=0.098 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCc-hHHHHHHHcCCCCc-----------ceeEEecCCcchHH
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPS-LSAMIVNKYKLRGN-----------IRSFNLGGMGCSAG 239 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps-~a~~I~~~lGl~~~-----------~~~~dl~g~gCsg~ 239 (504)
+...+...++++++|+++|++++|||.+++.. ++..++- .-..+.++++.+.+ ...=.+++++|++.
T Consensus 201 ~~y~~~~~~~~~~~l~~~g~~~~did~~i~H~-p~~~~~~k~~~~~l~~~~~~~~~~~~~~~~~s~~~~~~~GN~~sas~ 279 (379)
T TIGR01835 201 EQYLNAFENAWNDYAKRTGLSLADFAAFCFHV-PFTKMGLKALRHILKKNYEDEDESVQNAYLESIIYNREVGNLYTGSL 279 (379)
T ss_pred HHHHHHHHHHHHHHHHHhCCCHHHcCEEEECC-CCCcHHHHHHHHHHhhcccccHHHHHHHhhhhhhhhhhcCchHhHHH
Confidence 34555667889999999999999999988765 2111211 11235566665421 11226677777777
Q ss_pred HHHHHH
Q 010687 240 VIAIDL 245 (504)
Q Consensus 240 l~aL~l 245 (504)
..+|.-
T Consensus 280 ~l~L~~ 285 (379)
T TIGR01835 280 YLGLAS 285 (379)
T ss_pred HHHHHH
Confidence 777653
No 193
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed
Probab=74.33 E-value=8.8 Score=40.09 Aligned_cols=68 Identities=15% Similarity=0.165 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee-E--E-ecCCcchHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS-F--N-LGGMGCSAGVIAID 244 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-~--d-l~g~gCsg~l~aL~ 244 (504)
.+....-.+++++|+++|++++|||.+++.- ..+.+-..+.++||++++-.. . + .++++.++...+|+
T Consensus 239 ~~~~~~~~~i~~~L~~~gl~~~did~~v~HQ----~~~~i~~~i~~~Lgl~~ek~~~~~l~~~GNtssasip~~L~ 310 (353)
T PRK12880 239 MALECEPKSFKEILEFSKVDEKDIAFHLFHQ----SNAYLVDCIKEELKLNDDKVPNFIMEKYANLSACSLPALLC 310 (353)
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEECC----CCHHHHHHHHHHhCCCHHHhhhhhHHhhCCHHHHHHHHHHH
Confidence 4555667789999999999999999999763 234556789999999853322 1 2 44556556556665
No 194
>PRK09268 acetyl-CoA acetyltransferase; Provisional
Probab=73.54 E-value=19 Score=38.71 Aligned_cols=26 Identities=15% Similarity=0.195 Sum_probs=22.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN 202 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~ 202 (504)
-...|++++++++|++|+|||++=++
T Consensus 310 ~~~~a~~~a~~~AGl~~~Did~~Ei~ 335 (427)
T PRK09268 310 APAYAVPRLLARNGLTLQDFDFYEIH 335 (427)
T ss_pred cHHHHHHHHHHHcCCCHHHCCEEEec
Confidence 34579999999999999999998655
No 195
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism. The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.
Probab=73.14 E-value=12 Score=39.02 Aligned_cols=44 Identities=9% Similarity=0.052 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCC
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRG 224 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~ 224 (504)
-...|++++|+++|++++|||++=++- .++...-+..+.||+.+
T Consensus 252 ~~~~a~~~al~~Agl~~~did~~ei~d----~F~~~~l~~~e~lGl~~ 295 (375)
T cd00829 252 AARLAARRAYKMAGITPDDIDVAELYD----CFTIAELLALEDLGFCE 295 (375)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecC----cChHHHHHHHHHcCCCC
Confidence 345799999999999999999886552 13444556677788764
No 196
>PRK06064 acetyl-CoA acetyltransferase; Provisional
Probab=71.65 E-value=12 Score=39.45 Aligned_cols=41 Identities=17% Similarity=0.310 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
...|++++++++|++|+|||.+-.. +.+ ...-+..+.||+.
T Consensus 260 ~~~a~~~al~~aGi~~~did~~e~~d~ft-----~~~~~~~e~lgl~ 301 (389)
T PRK06064 260 AVVAAEKAYKMAGIEPKDIDVAEVHDCFT-----IAEILAYEDLGFA 301 (389)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCCCc-----HHHHHHHHHcCCC
Confidence 3578999999999999999988544 322 2345566777773
No 197
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI. This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.
Probab=71.41 E-value=19 Score=38.79 Aligned_cols=56 Identities=7% Similarity=-0.112 Sum_probs=32.8
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcC-----------------CCchhhhhhhhccccccccccchHHHHHHHHHH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQ-----------------LLPEHVEASRMTLHRFGNTSSSSIWYELAYTEA 451 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lg-----------------l~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 451 (504)
+|||.+-+|-.-....-...+.|| ++.+++.+| --+--+||...++=...+.++..
T Consensus 329 ~Did~~Ei~daFa~~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~-GG~la~GhP~gatG~~~v~e~~~ 401 (430)
T TIGR02446 329 SDLTLIDMHEAFAAQTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVL-GGSIAYGHPFAATGARMITQTLR 401 (430)
T ss_pred HHCCEEEeccccHHHHHHHHHHhcCcchhhhcccccccCCCCCCCccCCC-CCHHhcCCCccccHHHHHHHHHH
Confidence 899999999887655444455554 444444332 12233788876665555444433
No 198
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases. This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt
Probab=71.14 E-value=10 Score=40.05 Aligned_cols=49 Identities=14% Similarity=0.215 Sum_probs=32.7
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG 233 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g 233 (504)
..|++++++++|++|+|||.+-+.- ..+...-+..+.||+.. ..+|.+|
T Consensus 289 ~~a~~~a~~~Agi~~~did~~e~~d----~fa~~~~~~~e~lG~~~--~pvn~~G 337 (386)
T TIGR01930 289 VPAIPKALKKAGLSISDIDLFEINE----AFAAQVLACIKELGLDL--EKVNVNG 337 (386)
T ss_pred HHHHHHHHHHcCCCHHHCCeeehcc----hhHHHHHHHHHHhCCCh--hhcCCCC
Confidence 5899999999999999999884331 11223334557788742 3456554
No 199
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2.3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....
Probab=69.84 E-value=8.3 Score=34.16 Aligned_cols=83 Identities=20% Similarity=0.135 Sum_probs=49.1
Q ss_pred ccccCEEEEcCCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEE-EeechhHHh
Q 010687 394 KLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQ-IAFGSGFKC 472 (504)
Q Consensus 394 ~~did~~~~Hq~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vll-i~fG~G~~~ 472 (504)
.+|+|.|=+|-.-....-...+.||++++++.++=-.+. +||...+|=...+.++..+=+-+.|++.+. +..|.|. -
T Consensus 39 ~~did~~Ei~EaFA~~~l~~~~~lg~~~~~vN~~GG~la-~GHP~gasG~r~~~~l~~~L~~~~~~~gla~~~~ggG~-g 116 (123)
T PF02803_consen 39 PDDIDVIEINEAFAAQVLAFLEALGLDPEKVNPNGGALA-LGHPLGASGARLVVELAHQLRRRGGRYGLAAICAGGGQ-G 116 (123)
T ss_dssp GGGESEEEE--SBHHHHHHHHHHHTTGGGGBSTT--HHH-H-BHTTTHHHHHHHHHHHHHHHHTTSEEEEEEEETTTE-E
T ss_pred ccccchhhccchhhhHHHHhhccccccccccCccccccc-ccccccccccchhhhhHHHHHHhchhhhhHHhccccee-e
Confidence 389999999999998888899999999999876422233 788766654444433332211134666443 4444443 2
Q ss_pred hheeeE
Q 010687 473 NSAVWQ 478 (504)
Q Consensus 473 ~sav~r 478 (504)
.+++++
T Consensus 117 ~a~lle 122 (123)
T PF02803_consen 117 SAVLLE 122 (123)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 455554
No 200
>PRK05790 putative acyltransferase; Provisional
Probab=69.72 E-value=8.7 Score=40.66 Aligned_cols=68 Identities=16% Similarity=0.273 Sum_probs=43.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDM 249 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~l 249 (504)
...|++++++++|++|+|||.+-.+- .+....-+..+.||+.+ ..+|++| .|++|....++++++|
T Consensus 293 ~~~a~~~a~~~Agi~~~did~~e~~d----~f~~~~l~~~e~lg~~~--~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL 366 (393)
T PRK05790 293 PVPAIRKALEKAGWSLADLDLIEINE----AFAAQALAVEKELGLDP--EKVNVNGGAIALGHPIGASGARILVTLLHEM 366 (393)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCh--hhcCCCcchhhhCcchhhhHHHHHHHHHHHH
Confidence 35799999999999999999886431 12333445667788742 2334443 3555666666666666
Q ss_pred Hh
Q 010687 250 LQ 251 (504)
Q Consensus 250 L~ 251 (504)
-.
T Consensus 367 ~~ 368 (393)
T PRK05790 367 KR 368 (393)
T ss_pred Hh
Confidence 54
No 201
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2.3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....
Probab=69.09 E-value=1.4 Score=38.33 Aligned_cols=77 Identities=14% Similarity=0.195 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCC---cceeE----EecCCcchHHHHHHHHHHH
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRG---NIRSF----NLGGMGCSAGVIAIDLAKD 248 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~---~~~~~----dl~g~gCsg~l~aL~lA~~ 248 (504)
-..++++++|+++|++|+|||.|... +......+.-..-+.+-|+-.. .+..- .++....++++.+|-.+--
T Consensus 26 ~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~asG~~~l~~~~l 105 (119)
T PF02801_consen 26 ALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAASGLLSLAKALL 105 (119)
T ss_dssp HHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceeccccccccccccchHHHHHHHHH
Confidence 34778999999999999999998865 3322122333344555555321 12222 2344466667767666666
Q ss_pred HHhcC
Q 010687 249 MLQVH 253 (504)
Q Consensus 249 lL~a~ 253 (504)
.++.+
T Consensus 106 ~l~~~ 110 (119)
T PF02801_consen 106 ALEHG 110 (119)
T ss_dssp HHHHT
T ss_pred HHhcC
Confidence 66544
No 202
>TIGR00329 gcp_kae1 metallohydrolase, glycoprotease/Kae1 family. This subfamily includes the well-studied secreted O-sialoglycoprotein endopeptidase (glycoprotease, EC 3.4.24.57) of Pasteurella haemolytica, a pathogen. A member from Riemerella anatipestifer, associated with cohemolysin activity, likewise is exported without benefit of a classical signal peptide and shows glycoprotease activity on the test substrate glycophorin. However, archaeal members of this subfamily show unrelated activities as demonstrated in Pyrococcus abyssi: DNA binding, iron binding, apurinic endonuclease activity, genomic association with a kinase domain, and no glycoprotease activity. This family thus pulls together a set of proteins as a homology group that appears to be near-universal in life, yet heterogeneous in assayed function between bacteria and archaea.
Probab=68.99 E-value=16 Score=37.40 Aligned_cols=35 Identities=11% Similarity=0.088 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNP 208 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~ 208 (504)
-.+.....++++|+++|++++|||.+.++..|+..
T Consensus 48 H~~~l~~~i~~~l~~~~~~~~did~iav~~GPG~~ 82 (305)
T TIGR00329 48 HAENIPPLLERALIESNVDKSEIDLIAYTQGPGLG 82 (305)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCch
Confidence 45567778999999999999999999999887643
No 203
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine. There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.
Probab=68.22 E-value=13 Score=39.41 Aligned_cols=70 Identities=13% Similarity=0.154 Sum_probs=46.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCc----------------ceeEEecC--------
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGN----------------IRSFNLGG-------- 233 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~----------------~~~~dl~g-------- 233 (504)
...|++++|+++|++++|||++=++- .++...-+..+.||+.+. -..+|.+|
T Consensus 271 ~~~A~~~al~~Agi~~~DID~~Ei~d----~Fa~~~l~~~e~lgl~~~g~~~~~~~~g~~~~~G~~pvN~~GG~la~GhP 346 (393)
T cd00826 271 PIEAARKALEKAGLGIGDLDLIEAHD----AFAANACATNEALGLCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHP 346 (393)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhh----hhHHHHHHHHHHhCCCcccchhhhhhcCccccCCcceECCCCchhhcCCC
Confidence 46899999999999999999876541 123334455566776531 13455554
Q ss_pred CcchHHHHHHHHHHHHHh
Q 010687 234 MGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 234 ~gCsg~l~aL~lA~~lL~ 251 (504)
.||+|....++++++|-.
T Consensus 347 ~gAtG~~~~~e~~~qL~g 364 (393)
T cd00826 347 IGASGAAICAELCFELKG 364 (393)
T ss_pred ccccHHHHHHHHHHHHhh
Confidence 356677777777777754
No 204
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II. KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.
Probab=67.29 E-value=10 Score=39.77 Aligned_cols=77 Identities=16% Similarity=0.086 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCC-Ccce----eEEecCCcchHHHHHHHHHHHHH
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLR-GNIR----SFNLGGMGCSAGVIAIDLAKDML 250 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~-~~~~----~~dl~g~gCsg~l~aL~lA~~lL 250 (504)
-..++++++|+++|++++|||.+... +.+..-.+.-...+.+-++-. +.+. .-.++...+++|+..+-.+...|
T Consensus 276 ~~~~~i~~al~~agi~~~dId~v~~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l 355 (406)
T cd00834 276 GAARAMRAALADAGLSPEDIDYINAHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLAL 355 (406)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEecccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHH
Confidence 35678999999999999999998866 433333333344455555542 0111 11234445666676666666666
Q ss_pred hcC
Q 010687 251 QVH 253 (504)
Q Consensus 251 ~a~ 253 (504)
+.+
T Consensus 356 ~~~ 358 (406)
T cd00834 356 RDG 358 (406)
T ss_pred hcC
Confidence 655
No 205
>PRK08256 lipid-transfer protein; Provisional
Probab=66.98 E-value=16 Score=38.66 Aligned_cols=69 Identities=13% Similarity=0.188 Sum_probs=44.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCc----------------ceeEEecC--------
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGN----------------IRSFNLGG-------- 233 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~----------------~~~~dl~g-------- 233 (504)
...|++++++++|++++|||.+-+.- .++...-+..+.||+.+. -..+|.+|
T Consensus 266 ~~~a~~~a~~~ag~~~~DiD~~ei~d----~f~~~~l~~le~lg~~~~Ge~~~~~~~G~~~~~G~~pvN~~GG~ls~Ghp 341 (391)
T PRK08256 266 TRAAAQQVYEQAGIGPEDIDVVELHD----CFSANELLTYEALGLCPEGEAEKFIDDGDNTYGGRWVVNPSGGLLSKGHP 341 (391)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEeecc----CCcHHHHHHHHHcCCCCCCchHHHHHCCCccCCCCeeeCCCCccccCCCC
Confidence 45799999999999999999876541 123344555667777643 12555554
Q ss_pred CcchHHHHHHHHHHHHH
Q 010687 234 MGCSAGVIAIDLAKDML 250 (504)
Q Consensus 234 ~gCsg~l~aL~lA~~lL 250 (504)
.||+|.....+++++|-
T Consensus 342 ~gasG~~~~~e~~~QL~ 358 (391)
T PRK08256 342 LGATGLAQCAELTWQLR 358 (391)
T ss_pred ccHHHHHHHHHHHHHhc
Confidence 24555556666666654
No 206
>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2.1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....
Probab=66.05 E-value=9.9 Score=36.80 Aligned_cols=42 Identities=24% Similarity=0.277 Sum_probs=29.2
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhhe
Q 010687 434 FGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSA 475 (504)
Q Consensus 434 ~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~sa 475 (504)
.|+-.+.|.|...+.+++.=.+++|++|+=+|-|+|+..+.+
T Consensus 49 i~~~~~is~P~~~a~~l~~L~l~pg~~VLeIGtGsGY~aAll 90 (209)
T PF01135_consen 49 IGCGQTISAPSMVARMLEALDLKPGDRVLEIGTGSGYQAALL 90 (209)
T ss_dssp EETTEEE--HHHHHHHHHHTTC-TT-EEEEES-TTSHHHHHH
T ss_pred ecceeechHHHHHHHHHHHHhcCCCCEEEEecCCCcHHHHHH
Confidence 455567777888888888767999999999999999875443
No 207
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed
Probab=64.92 E-value=25 Score=37.18 Aligned_cols=75 Identities=15% Similarity=0.083 Sum_probs=42.4
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCCcce--eEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 179 FGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRGNIR--SFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~~~~--~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
.++++++|+++|++|+|||.+... +.+..-.+.-...|.+.+|-+..+- --.++...+++|+..+-.+...|+.+
T Consensus 263 ~~a~~~Al~~Agl~~~dId~v~~hgtgt~~~D~~E~~al~~~f~~~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~ 340 (392)
T PRK09185 263 ILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVAAVFGDGVPCSSTKGLTGHTLGAAGAVEAAICWLALRHG 340 (392)
T ss_pred HHHHHHHHHHcCCCHHHccEEEeCCCCCcCCCHHHHHHHHHHhCCCCceeCCCcccccChhhcchHHHHHHHHHHhcC
Confidence 479999999999999999998755 4332222333455666666321111 11233344555555554444444443
No 208
>PLN02644 acetyl-CoA C-acetyltransferase
Probab=64.88 E-value=13 Score=39.54 Aligned_cols=67 Identities=15% Similarity=0.214 Sum_probs=42.2
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC--------CcchHHHHHHHHHHHHH
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAKDML 250 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~~lL 250 (504)
..+++++|+++|++|+|||.+=++- .++...-+..+.||+.+ ..+|.+| .|++|....++++.+|-
T Consensus 294 ~~a~~~al~~Agi~~~Did~~Ei~d----~f~~~~l~~~e~lg~~~--~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~ 367 (394)
T PLN02644 294 ALAIPKALKHAGLEASQVDYYEINE----AFSVVALANQKLLGLDP--EKVNVHGGAVSLGHPIGCSGARILVTLLGVLR 367 (394)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEeCc----HHHHHHHHHHHHhCCCc--cccCCCCChHhhCCCHHHHHHHHHHHHHHHHH
Confidence 3599999999999999999886531 12333344566777642 2334443 25555556666666654
Q ss_pred h
Q 010687 251 Q 251 (504)
Q Consensus 251 ~ 251 (504)
.
T Consensus 368 ~ 368 (394)
T PLN02644 368 S 368 (394)
T ss_pred h
Confidence 3
No 209
>PRK09604 UGMP family protein; Validated
Probab=64.28 E-value=21 Score=36.97 Aligned_cols=49 Identities=8% Similarity=0.078 Sum_probs=35.8
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----chHHHHHHHcCC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-----SLSAMIVNKYKL 222 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-----s~a~~I~~~lGl 222 (504)
-.+.....++++|+++|++++|||.+.+++.|+..+. +.+..++..++.
T Consensus 51 H~~~l~~~i~~~L~~~~~~~~did~iavt~GPG~~tglrvg~~~Ak~La~~~~i 104 (332)
T PRK09604 51 HVENIVPLIEEALKEAGLTLEDIDAIAVTAGPGLVGALLVGVSFAKALALALNK 104 (332)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcHHhHHHHHHHHHHHHHHhCC
Confidence 4566788899999999999999999999987764332 233445555544
No 210
>COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=64.26 E-value=9.4 Score=37.24 Aligned_cols=59 Identities=14% Similarity=0.168 Sum_probs=44.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-chHHHHHHHcCCCCcceeEEecC
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-SLSAMIVNKYKLRGNIRSFNLGG 233 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~g 233 (504)
.+.....++++|+++|++++|||.|++++.|+..+- -++.-+++-|.+..+++.+.++.
T Consensus 38 se~l~~~i~~ll~~~~~~~~dld~iav~~GPGSFTGlRIG~~~AkgLA~~l~iplvgvss 97 (220)
T COG1214 38 AERLMPMIDELLKEAGLSLQDLDAIAVAKGPGSFTGLRIGVAFAKGLALALNIPLVGVSS 97 (220)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEccCCCcccchhhHHHHHHHHHHHcCCCEEEeCH
Confidence 456777899999999999999999999998765544 23444555555555677887773
No 211
>COG0533 QRI7 Metal-dependent proteases with possible chaperone activity [Posttranslational modification, protein turnover, chaperones]
Probab=64.22 E-value=32 Score=35.79 Aligned_cols=87 Identities=15% Similarity=0.082 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-chHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-SLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
.+-....++++|+++|++.+|||+|-++..|+-.-+ ......++.|-+.-+.+-+-++. |-|=+.+-.+..+. .
T Consensus 51 ~e~i~~li~~al~eA~~~~~dID~IA~T~gPGL~gaL~VG~~~Ak~LA~a~~kPli~VnH--~~gHi~a~~l~~~~---~ 125 (342)
T COG0533 51 VENIPPLIEEALAEAGVSLEDIDAIAVTAGPGLGGALLVGATAAKALALALNKPLIPVNH--LEGHIEAARLETGL---A 125 (342)
T ss_pred HHHHHHHHHHHHHHcCCCcccCCEEEEecCCCchhHHHHHHHHHHHHHHHhCCCEeecch--HHHHHHHHHhccCC---C
Confidence 444677899999999999999999988877663211 12334444444444566778884 55544443332221 1
Q ss_pred CCCeEEEEEeccC
Q 010687 254 RNTYAVVVSTENI 266 (504)
Q Consensus 254 ~~~~aLVVs~E~~ 266 (504)
..--+|+||+=..
T Consensus 126 ~p~v~LlVSGGHT 138 (342)
T COG0533 126 FPPVALLVSGGHT 138 (342)
T ss_pred CCcEEEEEecCce
Confidence 2346788886653
No 212
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional
Probab=62.89 E-value=20 Score=38.78 Aligned_cols=43 Identities=14% Similarity=0.138 Sum_probs=31.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRG 224 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~ 224 (504)
+..|++++++++|++|+|||++=++- .++...-+..+.||+.+
T Consensus 311 ~~~A~~~a~~~AGl~~~DiD~~Ei~d----aFa~~~l~~~e~lGl~~ 353 (438)
T PTZ00455 311 SRAAAQKALSMAGVKPSDLQVAEVHD----CFTIAELLMYEALGIAE 353 (438)
T ss_pred HHHHHHHHHHHcCCCHHHCcEeeecc----cChHHHHHHHHHcCCCC
Confidence 47899999999999999999885541 12344455667777754
No 213
>TIGR01796 CM_mono_aroH monofunctional chorismate mutase, gram positive type, clade 1. This model represents a family of monofunctional (non-fused) chorismate mutases from gram positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus).
Probab=62.72 E-value=21 Score=31.38 Aligned_cols=56 Identities=11% Similarity=0.144 Sum_probs=40.3
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCchHHHHHHHc-CCCCcceeEEecCCcchH
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLF--NPTPSLSAMIVNKY-KLRGNIRSFNLGGMGCSA 238 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~--~~~Ps~a~~I~~~l-Gl~~~~~~~dl~g~gCsg 238 (504)
.+-.++.+++.+++++||--+++..++| ..+| +..++++ |+. +++-++...|.=-|
T Consensus 23 ~eLl~~ii~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~Gw~-~Vplmc~qEm~V~g 81 (117)
T TIGR01796 23 AELLTELMERNELTPEDLISVIFTVTEDLHADFP---AAAARGLPGWT-DVPVMCAQEIPVEG 81 (117)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEecCcccccCh---HHHHHhccCCC-CcceeccCcCCCCC
Confidence 3445667788999999999999987765 4467 4555666 987 78877777655444
No 214
>TIGR03725 bact_YeaZ universal bacterial protein YeaZ. This family describes a protein family, YeaZ, that appears to be universal in bacteria, but whose function is unknown. This family is related to the gcp (glycoprotease) protein family, also universal in bacteria and unknown in function. In Gram-positive lineages, members of these two related families often belong to the same operon, along with the ribosomal-protein-alanine acetyltransferase gene. Members of this family may occur as fusions with gcp or the ribosomal protein N-acetyltransferase rimI, and is frequently encoded next to rimI.
Probab=61.65 E-value=10 Score=36.24 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP 210 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P 210 (504)
..+.....++++|+++|++++|||.+.++..|+..+.
T Consensus 33 h~~~l~~~i~~~l~~~~~~~~~i~~iav~~GPGSfTG 69 (202)
T TIGR03725 33 HSEILLPMIEELLAEAGLSLQDLDAIAVGVGPGSFTG 69 (202)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHh
Confidence 4566777999999999999999999999988765544
No 215
>PRK12578 acetyl-CoA acetyltransferase; Provisional
Probab=61.19 E-value=19 Score=37.93 Aligned_cols=42 Identities=17% Similarity=0.144 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRG 224 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~ 224 (504)
...|++++|+++|++|+|||.+-+. | .+...-+..+.||+.+
T Consensus 259 ~~~a~~~al~~Agi~~~DiD~~ei~d~-----ft~~~l~~le~lGl~~ 301 (385)
T PRK12578 259 TQLAARQAYNMAKVTPNDIEVATVHDA-----FTIAEIMGYEDLGFTE 301 (385)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEecCc-----ChHHHHHHHHHcCCCC
Confidence 4579999999999999999997544 3 2244455666777753
No 216
>PRK14878 UGMP family protein; Provisional
Probab=61.04 E-value=17 Score=37.52 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=36.3
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----chHHHHHHHcCC
Q 010687 170 AREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-----SLSAMIVNKYKL 222 (504)
Q Consensus 170 ~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-----s~a~~I~~~lGl 222 (504)
.|...+.+. .+++++|+++|++++|||.+.++..|...+. +.+..++..++.
T Consensus 41 ~~~h~~~l~-~~i~~~l~~a~~~~~did~Iavt~gPG~~~~lrvg~~~Ak~la~~~~~ 97 (323)
T PRK14878 41 AQHHAEVAP-ELLRKALEKAGISIEDIDAVAVSQGPGLGPALRVGATAARALALKYNK 97 (323)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHHHCCEEEEecCCCcccchHHHHHHHHHHHHHhCC
Confidence 344455544 8999999999999999999999987764332 123445555554
No 217
>PRK06633 acetyl-CoA acetyltransferase; Provisional
Probab=60.70 E-value=19 Score=38.35 Aligned_cols=67 Identities=18% Similarity=0.338 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHH-HHHHcCCCCcceeEEecC--------CcchHHHHHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAM-IVNKYKLRGNIRSFNLGG--------MGCSAGVIAIDLAK 247 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~-I~~~lGl~~~~~~~dl~g--------~gCsg~l~aL~lA~ 247 (504)
...|++++|+++|++|+|||.+=++ +. +.... -.+.||++ ...+|++| .|++|....+.++.
T Consensus 292 ~~~a~~~Al~~AGl~p~DID~~ei~daf------a~~~l~~~~~l~~~--~~~vN~sGg~~a~GHplgAtG~~~~~~~~~ 363 (392)
T PRK06633 292 PVPASQKALSKAGWSVNDLEVIEVNEAF------AAQSIYVNREMKWD--MEKVNINGGAIAIGHPIGASGGRVLITLIH 363 (392)
T ss_pred HHHHHHHHHHHcCCCHHHcCeeehhhHH------HHHHHHHHhhhCCC--ccccCCCCchHhhCCcHHHHHHHHHHHHHH
Confidence 4678999999999999999988644 11 11111 13344543 12344443 36666677777777
Q ss_pred HHHhc
Q 010687 248 DMLQV 252 (504)
Q Consensus 248 ~lL~a 252 (504)
+|-+.
T Consensus 364 qL~~~ 368 (392)
T PRK06633 364 GLRRA 368 (392)
T ss_pred HHHhc
Confidence 77654
No 218
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=60.39 E-value=15 Score=38.93 Aligned_cols=45 Identities=13% Similarity=0.151 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
...|++++|+++|++|+|||.+-.. +.+..-.+.-..-+.+-+|-
T Consensus 278 ~~~a~~~Al~~agi~~~dId~v~~hgtgt~~~d~~E~~al~~~~~~ 323 (411)
T PRK07314 278 AARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKRVFGE 323 (411)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEccccCCccccHHHHHHHHHHhcc
Confidence 3578999999999999999998754 43322233333456666663
No 219
>PF00814 Peptidase_M22: Glycoprotease family; InterPro: IPR000905 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M22 (clan MK). The type example being O-sialoglycoprotein endopeptidase (3.4.24.57 from EC) from Pasteurella haemolytica (Mannheimia haemolytica). O-Sialoglycoprotein endopeptidase is secreted by the bacterium P. haemolytica, and digests only proteins that are heavily sialylated, in particular those with sialylated serine and threonine residues []. Substrate proteins include glycophorin A and leukocyte surface antigens CD34, CD43, CD44 and CD45 [, ]. Removal of glycosylation, by treatment with neuraminidase, completely negates susceptibility to O-sialoglycoprotein endopeptidase digestion [, ]. Sequence similarity searches have revealed other members of the M22 family, from yeast, Mycobacterium, Haemophilus influenzae and the cyanobacterium Synechocystis []. The zinc-binding and catalytic residues of this family have not been determined, although the motif HMEGH may be a zinc-binding region [].; GO: 0004222 metalloendopeptidase activity, 0006508 proteolysis; PDB: 2A6A_A 2GEL_G 2GEM_B 1OKJ_B 3ENO_A 3EN9_B 2VWB_B 3ENH_B 2IVO_D 2IVP_A ....
Probab=60.03 E-value=13 Score=37.36 Aligned_cols=58 Identities=14% Similarity=0.126 Sum_probs=35.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-chHHHHHHHcCCCCcceeEEec
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-SLSAMIVNKYKLRGNIRSFNLG 232 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~ 232 (504)
.+.....++++|+++|++++|||.+.++..|+..++ -.+...++-|...-+++.+.++
T Consensus 30 ~~~L~~~i~~~l~~~~~~~~did~iavt~GPGsftgLrvG~~~Ak~La~~~~~Pli~v~ 88 (268)
T PF00814_consen 30 SENLPPLIEELLKEAGISLSDIDAIAVTRGPGSFTGLRVGLSFAKGLALALNIPLIGVS 88 (268)
T ss_dssp HHHHHHHHHHHHHHHTS-GGGESEEEEEEESS-HHHHHHHHHHHHHHHHHTT--EEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCcccccHHHHHHHHHHHHHhCCCeEeec
Confidence 445568899999999999999999999988865443 1122233333222235566666
No 220
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases.They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.
Probab=59.85 E-value=16 Score=38.56 Aligned_cols=46 Identities=13% Similarity=0.107 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
.-..+|++++|+++|++|+|||.+... +++..-.+.-...+.+-+|
T Consensus 274 ~~~~~a~~~Al~~Agi~~~dId~i~~hgtgt~~~D~~E~~ai~~~~~ 320 (407)
T cd00828 274 KGIARAIRTALAKAGLSLDDLDVISAHGTSTPANDVAESRAIAEVAG 320 (407)
T ss_pred HHHHHHHHHHHHHcCCCHHHcCEEecccccCccccHHHHHHHHHHHh
Confidence 345778999999999999999998755 4433223333344444444
No 221
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional
Probab=59.84 E-value=22 Score=37.04 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
-...|++++|+++|++|+|||.+-.. |.+..-.+.-...|.+-||-
T Consensus 207 ~~~~ai~~AL~~Agl~p~dIdyIeaHgtgT~~~D~~E~~Ai~~~fg~ 253 (342)
T PRK14691 207 GAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKHLFGE 253 (342)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEEecCCCCcCCCHHHHHHHHHHhCC
Confidence 46779999999999999999987654 54433345555667777763
No 222
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=59.49 E-value=28 Score=37.06 Aligned_cols=44 Identities=9% Similarity=0.018 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
..++++++|+++|+ |+|||.|... |++..-...-...|.+.++.
T Consensus 282 ~~~am~~AL~~Agl-~~~IdyI~ahgtgT~~~D~~E~~Ai~~~f~~ 326 (398)
T PRK06519 282 LEASLERLLKPAGG-LAAPTAVISGATGAHPATAEEKAALEAALAG 326 (398)
T ss_pred HHHHHHHHHHHCCC-cccCCEEEeCCCCCCCccHHHHHHHHHHcCC
Confidence 46899999999999 8999998755 44332233344556777774
No 223
>TIGR03723 bact_gcp putative glycoprotease GCP. This model represents bacterial members of a protein family that is widely distributed. In a few pathogenic species, the protein is exported in a way that may represent an exceptional secondary function. This model plus companion (archaeal) model TIGR03722 together span the prokaryotic member sequences of TIGR00329, a protein family that appears universal in life, and whose broad function is unknown. A member of TIGR03722 has been characterized as a DNA-binding protein with apurinic endopeptidase activity. In contrast, the rare characterized members of the present family show O-sialoglycoprotein endopeptidase (EC. 3.4.24.57) activity after export. These include glycoprotease (gcp) from Pasteurella haemolytica A1 and a cohemolysin from Riemerella anatipestifer (GB|AAG39646.1). The member from Staphylococcus aureus is essential and is related to cell wall dynamics and the modulation of autolysis, but members are also found in the Mycoplasmas
Probab=59.44 E-value=30 Score=35.61 Aligned_cols=56 Identities=9% Similarity=0.054 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----chHHHHHHHcCCCCcceeEEecC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-----SLSAMIVNKYKLRGNIRSFNLGG 233 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-----s~a~~I~~~lGl~~~~~~~dl~g 233 (504)
-.+.....++++|+++|++++|||.+.++..|...+. +.+.-++..++ ++.+.++.
T Consensus 49 H~~~l~~~i~~~l~~~~~~~~~id~iav~~GPGsftglrig~~~Ak~la~~~~----~p~~~v~h 109 (314)
T TIGR03723 49 HLEAIPPLIEEALAEAGLTLSDIDAIAVTAGPGLIGALLVGVSFAKALALALN----KPLIGVNH 109 (314)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCCEEEEecCCChHHhHHHHHHHHHHHHHHhC----CCEEeccc
Confidence 4556778899999999999999999999988774333 22333444444 44555654
No 224
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=58.43 E-value=15 Score=43.91 Aligned_cols=124 Identities=20% Similarity=0.258 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcC----EEEEeec-CC-----CCCC----------chHHHHHHHcCC--CCcceeEEe
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIG----ILVVNCS-LF-----NPTP----------SLSAMIVNKYKL--RGNIRSFNL 231 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId----~LI~~~s-~~-----~~~P----------s~a~~I~~~lGl--~~~~~~~dl 231 (504)
-..|..+|--+++-++||+|.+.. .+.+.|| +. ...| -.-+|.+||+.. .-.-++|.+
T Consensus 87 q~RlLLE~t~EAivDaGiNP~~LRGs~tGv~vg~s~seTs~~~~~dp~t~~Gy~mtgc~raMfaNRiSytFDfqGPS~s~ 166 (2376)
T KOG1202|consen 87 QLRLLLEATWEAIVDAGINPDDLRGSRTGVFVGVSGSETSGALSQDPDTVNGYSMTGCVRAMFANRISYTFDFQGPSFSV 166 (2376)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCcccceeEEeecCccccccccCCCccccceeecccHHHHhhcceeEEEeccCCchhh
Confidence 456788888899999999998764 2333333 11 1112 123677777542 112467777
Q ss_pred cCCcchHHHHHHHHHHHHHhcCCCCeEEEEEeccCcC-----CCcC-------CC----CcCccccccccccccEEEEEe
Q 010687 232 GGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQ-----NWYF-------GN----KKSMLIPNCLFRVGGSAVLLS 295 (504)
Q Consensus 232 ~g~gCsg~l~aL~lA~~lL~a~~~~~aLVVs~E~~S~-----~~~~-------~~----dr~~l~~~~lfgDGAaA~LLs 295 (504)
. .+|++.+.|++.|.+-++.+...+|+|-++-.+-. .|.+ |. |.+. ....=.||.+|++|.
T Consensus 167 D-tacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRLgmls~dGsCkaFDeag--nGY~Rseg~~avllq 243 (2376)
T KOG1202|consen 167 D-TACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRLGMLSPDGSCKAFDEAG--NGYCRSEGVVAVLLQ 243 (2376)
T ss_pred h-hhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHhcCcCCCCcccchhccC--CceeecCceEEEEEe
Confidence 7 69999999999999999999999999988766432 1111 11 1110 123447999999999
Q ss_pred ccccc
Q 010687 296 NKAKD 300 (504)
Q Consensus 296 ~~~~~ 300 (504)
++...
T Consensus 244 rk~~A 248 (2376)
T KOG1202|consen 244 RKSLA 248 (2376)
T ss_pred hhHHH
Confidence 87653
No 225
>PRK07855 lipid-transfer protein; Provisional
Probab=57.74 E-value=36 Score=36.05 Aligned_cols=25 Identities=24% Similarity=0.335 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN 202 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~ 202 (504)
+..|++++++++|++|+|||++=+.
T Consensus 268 ~~~aa~~a~~~AGi~~~DiDv~El~ 292 (386)
T PRK07855 268 MGLVARQLWAQSGLGPADIDTAILY 292 (386)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEec
Confidence 3479999999999999999998544
No 226
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II. FabB sequences should fall well below the noise cutoff of this model.
Probab=57.20 E-value=22 Score=37.48 Aligned_cols=45 Identities=11% Similarity=0.128 Sum_probs=31.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
..+|++++|+++|++|+|||.+... |.+..-.+.-...+.+.+|-
T Consensus 277 ~~~ai~~Al~~Agi~~~dId~ve~h~tgt~~~D~~E~~a~~~~~~~ 322 (407)
T TIGR03150 277 AARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKRVFGD 322 (407)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCcCCCCCCCCHHHHHHHHHHhcc
Confidence 4578999999999999999998755 44333334444556666664
No 227
>PRK07937 lipid-transfer protein; Provisional
Probab=57.14 E-value=37 Score=35.56 Aligned_cols=75 Identities=9% Similarity=0.012 Sum_probs=45.2
Q ss_pred HHHHHHHh-CCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCC-------cchHHHHHHHHHHHHHhc
Q 010687 181 ALDNLFAN-TNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGM-------GCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 181 Aa~~aL~~-agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~-------gCsg~l~aL~lA~~lL~a 252 (504)
++++++++ +|++|+|||++=+.- .++...-+..+.||+.++ ..+|.+|- ||+|....++++.+|...
T Consensus 251 ~~~~a~~~aAgi~~~diD~~Ei~D----~F~~~~l~~~e~lGl~g~-~pvN~~GG~l~ghp~gatG~~~~~e~~~QL~g~ 325 (352)
T PRK07937 251 STALAAEAATGGDAGGVDVAELHA----PFTHQELILREALGLGDK-TKVNPSGGALAANPMFAAGLERIGEAARHIWDG 325 (352)
T ss_pred HHHHHHHHhcCCCHHHCCEEEEeC----CChHHHHHHHHHcCCCCC-CCcCCCccchhcCchhHHHHHHHHHHHHHHhcc
Confidence 34445555 599999999885441 234455567788998533 35666653 455555556666666443
Q ss_pred CCCCeEEEE
Q 010687 253 HRNTYAVVV 261 (504)
Q Consensus 253 ~~~~~aLVV 261 (504)
..+++|+.
T Consensus 326 -~a~~~l~~ 333 (352)
T PRK07937 326 -SARRALAH 333 (352)
T ss_pred -CCCEEEEe
Confidence 24555554
No 228
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional
Probab=56.78 E-value=31 Score=36.90 Aligned_cols=46 Identities=11% Similarity=0.031 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHh-CCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 177 VMFGALDNLFAN-TNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 177 la~~Aa~~aL~~-agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
-..+|++++|++ +|++|+|||.+-.+ |.+..-.+.-...+.+-+|-
T Consensus 284 ~~~~ai~~Al~~~Agi~~~dId~ie~hgtgt~~~D~~E~~al~~~~~~ 331 (421)
T PTZ00050 284 GARRCMENALKDGANININDVDYVNAHATSTPIGDKIELKAIKKVFGD 331 (421)
T ss_pred HHHHHHHHHHHhccCCChhhCCEEECCCccCCCCCHHHHHHHHHHhcc
Confidence 356799999999 99999999998755 44322223333446666664
No 229
>PRK06158 thiolase; Provisional
Probab=56.70 E-value=34 Score=36.17 Aligned_cols=41 Identities=12% Similarity=0.171 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
...|++++++++|++|+|||.+=+. | ++...-+..+.||+.
T Consensus 256 ~~~aa~~A~~~AGi~p~DId~~ElyD~-----Fs~~~l~~~E~lG~~ 297 (384)
T PRK06158 256 AAESGPRAFAMAGLTPADIDVVELYDA-----FTINTILFLEDLGFC 297 (384)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEecCC-----chHHHHHHHHHcCCC
Confidence 4579999999999999999987543 3 233334445666664
No 230
>PRK08313 acetyl-CoA acetyltransferase; Provisional
Probab=55.62 E-value=49 Score=34.98 Aligned_cols=43 Identities=9% Similarity=0.098 Sum_probs=29.3
Q ss_pred HHHHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCC
Q 010687 177 VMFGALDNLFANTNVK--PKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRG 224 (504)
Q Consensus 177 la~~Aa~~aL~~agi~--~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~ 224 (504)
....|++++++++|++ ++|||++=+. | ++...-+..+.||+.+
T Consensus 256 ~~~~a~~~a~~~Agi~~p~~Did~~el~d~-----F~~~~~~~~e~lGl~~ 301 (386)
T PRK08313 256 AGRDAAAALWKAAGITDPRDEIDVAEIYVP-----FSWFEPMWLENLGFAP 301 (386)
T ss_pred HHHHHHHHHHHHcCCCCChhhCCEEEeccC-----ChHHHHHHHHHcCCCC
Confidence 3457999999999997 6999987443 3 2333344556666653
No 231
>KOG2707 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=55.38 E-value=31 Score=35.98 Aligned_cols=50 Identities=14% Similarity=0.171 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----chHHHHHHHcCCC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-----SLSAMIVNKYKLR 223 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-----s~a~~I~~~lGl~ 223 (504)
-.+-.-++++++|+++|.+|+|+|+|-+...|+.+.+ +.|-.++.++..+
T Consensus 82 Hr~ni~~~iqral~aa~~~p~dldaIAVT~gPGl~lsL~vGl~fA~glA~~l~kP 136 (405)
T KOG2707|consen 82 HRENIPRLIQRALDAAGLSPKDLDAIAVTRGPGLPLSLKVGLSFAKGLAVKLQKP 136 (405)
T ss_pred HHHHHHHHHHHHHHHcCCCcccceeEEEecCCCceeehhhhHHHHHHHHHhccCC
Confidence 4455677899999999999999999998877765543 4555667766654
No 232
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria. CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.
Probab=54.57 E-value=24 Score=37.50 Aligned_cols=76 Identities=12% Similarity=0.163 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCCcceeE----EecCCcchHHHHHHHHHHHHHh
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRGNIRSF----NLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~~~~~~----dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
-..+|++++|+++|++|+|||.|... |.+..-.+.-...|.+-||-. +++.. .+....+++++..+-.+-..|+
T Consensus 271 ~~~~a~~~al~~ag~~~~~i~~v~~hgtgt~~~D~~E~~al~~~fg~~-~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~ 349 (399)
T cd00832 271 GLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAAVFGPR-GVPVTAPKTMTGRLYAGGAPLDVATALLALR 349 (399)
T ss_pred HHHHHHHHHHHHcCCCHHHccEEEeccCcCCCCCHHHHHHHHHHhCCC-CCceeCCCchhcchHHHHHHHHHHHHHHHHh
Confidence 35678999999999999999988755 444333444455577777643 22211 2333344555555544444455
Q ss_pred cC
Q 010687 252 VH 253 (504)
Q Consensus 252 a~ 253 (504)
.+
T Consensus 350 ~~ 351 (399)
T cd00832 350 DG 351 (399)
T ss_pred CC
Confidence 43
No 233
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II
Probab=54.51 E-value=29 Score=38.58 Aligned_cols=45 Identities=9% Similarity=0.121 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
..+|++++|+++|++|+|||.|-.. |++..-.+.-...|.+-||-
T Consensus 407 ~~~am~~AL~~AGl~p~dIdyInaHGTGT~~gD~~E~~Ai~~~Fg~ 452 (540)
T PLN02787 407 VILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452 (540)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEccCccCCCCCHHHHHHHHHHhCC
Confidence 4578999999999999999988654 54332223334456666763
No 234
>smart00825 PKS_KS Beta-ketoacyl synthase. The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.
Probab=54.47 E-value=35 Score=36.18 Aligned_cols=46 Identities=11% Similarity=0.138 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
....|++++|+++|++++|||.+... +.+..-...-...+.+-||.
T Consensus 280 ~~~~a~~~al~~Agl~~~dId~i~~h~tgt~~~d~~E~~al~~~~~~ 326 (424)
T smart00825 280 AQARLIRQALARAGVDPADVDYVEAHGTGTPLGDPIEAEALAAVFGQ 326 (424)
T ss_pred HHHHHHHHHHHHhCCCHHHccEEEeeCCCCCCCCHHHHHHHHHHHhc
Confidence 45679999999999999999998766 43321122223445555653
No 235
>PRK06365 acetyl-CoA acetyltransferase; Provisional
Probab=53.57 E-value=58 Score=35.07 Aligned_cols=41 Identities=10% Similarity=0.073 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCchHHHHHHHcCCC
Q 010687 178 MFGALDNLFANTNVK--PKDIGILVVN-CSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 178 a~~Aa~~aL~~agi~--~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
...|++++++++|++ ++|||++=+. | ++...-+..+.||+.
T Consensus 295 ~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~-----Fa~~~l~~lE~lGl~ 338 (430)
T PRK06365 295 GRMAAKEAYEMAGITDPLNDLDLIELHDA-----YTSSEIQTYEDLGLC 338 (430)
T ss_pred HHHHHHHHHHHcCCCCCHHHCCEEEeecC-----CcHHHHHHHHHcCCC
Confidence 457999999999997 7999988554 3 222333455566664
No 236
>TIGR03722 arch_KAE1 universal archaeal protein Kae1. This family represents the archaeal protein Kae1. Its partner Bud32 is fused with it in about half of the known archaeal genomes. The pair, which appears universal in the archaea, corresponds to EKC/KEOPS complex in eukaryotes. A recent characterization of the member from Pyrococcus abyssi, as an iron-binding, atypical DNA-binding protein with an apurinic lyase activity, challenges the common annotation of close homologs as O-sialoglycoprotein endopeptidase. The latter annotation is based on a characterized protein from the bacterium Pasteurella haemolytica.
Probab=52.49 E-value=24 Score=36.28 Aligned_cols=36 Identities=17% Similarity=0.113 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC
Q 010687 170 AREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLF 206 (504)
Q Consensus 170 ~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~ 206 (504)
.|+.++.+.. +++++|+++|++++|||.|.++..|.
T Consensus 42 ~~~H~~~l~~-~i~~~l~~~~~~~~did~Iavt~gPg 77 (322)
T TIGR03722 42 AEHHAEVAPK-LIKEALEEAGVSLEDIDAVAFSQGPG 77 (322)
T ss_pred HHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEEecCCc
Confidence 3444555444 49999999999999999999988765
No 237
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=51.53 E-value=31 Score=36.49 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
...+|++++|+++|++|+|||.+-.. |++..-.+.-...|.+-+|
T Consensus 255 ~~~~ai~~Al~~agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 300 (381)
T PRK05952 255 SAIAAIQQCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP 300 (381)
T ss_pred HHHHHHHHHHHHhCCCHHHeeEEEccCCCCCCCcHHHHHHHHHHcC
Confidence 46789999999999999999998755 4433223333344566665
No 238
>cd02185 AroH Chorismate mutase (AroH) is one of at least five chorismate-utilizing enzymes present in microorganisms that catalyze the rearrangement of chorismate to prephenic acid, the first committed step in the biosynthesis of aromatic amino acids. In prokaryotes, chorismate mutase may be fused to prephenate dehydratase, prephenate dehydrogenase, or 3-deoxy-D-arabino-heptulosonat-7-phosphate (DAHP) as part of a bifunctional enzyme. The AroH domain forms a homotrimer with three-fold symmetry.
Probab=51.01 E-value=47 Score=29.16 Aligned_cols=57 Identities=16% Similarity=0.168 Sum_probs=39.5
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCchHHHHHHHcCCCCcceeEEecCCcchH
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLF--NPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSA 238 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~--~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg 238 (504)
.+-.++.+++.+++++||--+++..++| ..+| +..++++|.-.+++-++...|.=-|
T Consensus 23 ~eLl~~i~~~N~l~~edivSv~FT~T~DL~a~FP---A~aaR~~~~~~~Vplmc~qE~~V~g 81 (117)
T cd02185 23 RELLEEIIERNNIKPEDIISVIFTVTPDLDAAFP---AKAARELGGWKYVPLMCAQEMDVPG 81 (117)
T ss_pred HHHHHHHHHHcCCCHHHEEEEEEEeCCcccccCh---HHHHHhcCCCCCcceeecCcCCCCC
Confidence 3445667788999999999999987765 4467 4566666443477777777654444
No 239
>PTZ00340 O-sialoglycoprotein endopeptidase-like protein; Provisional
Probab=50.65 E-value=55 Score=34.24 Aligned_cols=58 Identities=10% Similarity=0.169 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCch--HHHHHHHcCCCCcceeEEecC
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSL--SAMIVNKYKLRGNIRSFNLGG 233 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~--a~~I~~~lGl~~~~~~~dl~g 233 (504)
.+.....++++|+++|++++|||.|.++..|+. .+++ ....++-|...-+++.+.++.
T Consensus 50 ~~~l~~~i~~~l~~a~~~~~did~Iavt~GPGl-~~~LrVG~~~Ak~LA~a~~~PligV~H 109 (345)
T PTZ00340 50 REHILSLVKEALEEAKITPSDISLICYTKGPGM-GAPLSVGAVVARTLSLLWGKPLVGVNH 109 (345)
T ss_pred HHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCc-HhhHHHHHHHHHHHHHHcCCCEeecch
Confidence 444667889999999999999999998877763 2221 222333333333455666764
No 240
>KOG2708 consensus Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold) [Posttranslational modification, protein turnover, chaperones]
Probab=50.15 E-value=37 Score=33.47 Aligned_cols=86 Identities=17% Similarity=0.259 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-chHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-SLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-s~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
......-++.+|++++++++|||.+-+.-.|+.-.| +..+.+++-+.+=-+.+-..++ -|-|- |.+.+- +...
T Consensus 50 r~~il~Lv~~al~ea~v~~~diD~icyTKGPGmgaPL~~vaivaRtlsllw~kPlv~VN--HCigH---IEMGR~-iTgA 123 (336)
T KOG2708|consen 50 RAWILGLVKQALEEAGVTSDDIDCICYTKGPGMGAPLSVVAIVARTLSLLWNKPLVGVN--HCIGH---IEMGRE-ITGA 123 (336)
T ss_pred HHHHHHHHHHHHHHcCCChhhCCEEEEcCCCCCCCchhhHHHHHHHHHHHhCCCcccch--hhhhh---hhhcce-eccC
Confidence 344556678889999999999998888767766566 3334455555432345666666 57653 333333 2222
Q ss_pred CCCeEEEEEeccC
Q 010687 254 RNTYAVVVSTENI 266 (504)
Q Consensus 254 ~~~~aLVVs~E~~ 266 (504)
.+-.+|-||+-+.
T Consensus 124 ~nPvvLYvSGGNT 136 (336)
T KOG2708|consen 124 QNPVVLYVSGGNT 136 (336)
T ss_pred CCCEEEEEeCCce
Confidence 3567888887763
No 241
>PRK06059 lipid-transfer protein; Provisional
Probab=49.74 E-value=56 Score=34.60 Aligned_cols=40 Identities=23% Similarity=0.267 Sum_probs=28.1
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCCC
Q 010687 179 FGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
..|++++++++|++++|||++=+. |. ....-...+.||+.
T Consensus 276 ~~a~~~a~~~agl~~~Did~~El~d~f-----~~~~l~~~e~lGl~ 316 (399)
T PRK06059 276 DQILDAAYAEAGIGPEDLSLAEVYDLS-----TALELDWYEHLGLC 316 (399)
T ss_pred HHHHHHHHHHcCCCHHHCcEEeecccC-----hHHHHHHHHHcCCC
Confidence 578999999999999999988554 31 12222334677765
No 242
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=49.56 E-value=46 Score=36.72 Aligned_cols=84 Identities=13% Similarity=0.131 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC-----chHHHHHHHcCCCCcceeEEecCCcchHHHHHHH
Q 010687 170 AREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP-----SLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAID 244 (504)
Q Consensus 170 ~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P-----s~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~ 244 (504)
.+...+.+. .+++++|+++|++++|||.|.++..|+..+. +.|..++..+|. +.+.++.+-|-+.
T Consensus 45 ~~~H~~~l~-~~i~~~l~~~~~~~~~id~iav~~gPg~~~~l~vg~~~ak~la~~~~~----~~~~v~h~~aH~~----- 114 (535)
T PRK09605 45 AEHHAEAIP-KVIKEALEEAGLKPEDIDLVAFSQGPGLGPCLRVVATAARALALSLDV----PLIGVNHCVAHVE----- 114 (535)
T ss_pred HHHHHHHHH-HHHHHHHHHcCCCHhhCCEEEECCCCCcHhhHHHHHHHHHHHHHHhCC----CeecccHHHHHHH-----
Confidence 445555555 9999999999999999999998877764222 123334444554 4555554444332
Q ss_pred HHHHHHhcCC-CCeEEEEEecc
Q 010687 245 LAKDMLQVHR-NTYAVVVSTEN 265 (504)
Q Consensus 245 lA~~lL~a~~-~~~aLVVs~E~ 265 (504)
..++.++. ..-+|+|++-.
T Consensus 115 --~a~~~~~~~~~l~l~vsGg~ 134 (535)
T PRK09605 115 --IGRLTTGAEDPVTLYVSGGN 134 (535)
T ss_pred --HhhhccCCCCCeEEEEecCC
Confidence 22222331 23666666664
No 243
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=49.48 E-value=38 Score=36.25 Aligned_cols=44 Identities=14% Similarity=0.182 Sum_probs=30.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
..++++++|+++|++|+|||.+... +.+....+.-..-|.+.+|
T Consensus 291 ~~~ai~~AL~~agi~p~dId~i~~Hgtgt~~~d~~E~~al~~~~~ 335 (425)
T PRK06501 291 AIGAIRAALADAGLTPEQIDYINAHGTSTPENDKMEYLGLSAVFG 335 (425)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEecCccCcchHHHHHHHHHHHhc
Confidence 5688999999999999999998865 4332223333344555555
No 244
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=48.97 E-value=32 Score=36.89 Aligned_cols=44 Identities=18% Similarity=0.224 Sum_probs=32.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
+.+|.+.+|+++|++|+|||.|-.. |++..-...-+..|..-+|
T Consensus 278 a~~am~~AL~~Agl~~~~idYinaHgTsT~~nD~~E~~ai~~vfg 322 (412)
T COG0304 278 AIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAIKRVFG 322 (412)
T ss_pred HHHHHHHHHHHcCCCHhHCCEEeCCCccCCCccHHHHHHHHHHhc
Confidence 5689999999999999999999754 6654444444455666666
No 245
>PRK06157 acetyl-CoA acetyltransferase; Validated
Probab=48.58 E-value=87 Score=33.26 Aligned_cols=42 Identities=10% Similarity=0.188 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCC
Q 010687 178 MFGALDNLFANTNVK--PKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRG 224 (504)
Q Consensus 178 a~~Aa~~aL~~agi~--~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~ 224 (504)
...|++++++++|++ ++|||++=+. + +....-+..+.||+.+
T Consensus 268 ~~~aa~~a~~~AGl~~~~~Did~~Ei~D~-----Fs~~~l~~~e~lGl~~ 312 (398)
T PRK06157 268 TRIAARKAYREAGITDPREELSMAEVHDC-----FSITELVTMEDLGLSE 312 (398)
T ss_pred HHHHHHHHHHHcCCCCchhcCCEEEEecC-----ChHHHHHHHHHcCCCC
Confidence 457999999999998 7999987544 3 2333445566777653
No 246
>COG4126 Hydantoin racemase [Amino acid transport and metabolism]
Probab=47.96 E-value=1.1e+02 Score=29.98 Aligned_cols=101 Identities=17% Similarity=0.292 Sum_probs=65.8
Q ss_pred ChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCc
Q 010687 132 DESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPS 211 (504)
Q Consensus 132 ~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps 211 (504)
++++....+.+.++.|+.+.+..-.... . +-..++.-.++++.+....+++++++- ..|+++..|.. +-+
T Consensus 118 t~rs~~il~~lv~~~g~s~~~~~vrstd-l-~vL~l~~~~~~~~~~l~~~~~~a~~ed-----gAeaIiLGCAG---ms~ 187 (230)
T COG4126 118 TERSRPILEELVRSYGLSRHCRSVRSTD-L-PVLALEGPPEEAEALLVIEAAEALKED-----GAEAIILGCAG---MSD 187 (230)
T ss_pred CcccHHHHHHHHHhcCccccccceeeCC-C-CcccccCChHHHHHHHHHHHHHHhhhc-----CCCEEEEcCcc---HHH
Confidence 4556556677888889988765321110 0 111222334667888888888887764 47889988864 346
Q ss_pred hHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHhcC
Q 010687 212 LSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVH 253 (504)
Q Consensus 212 ~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~a~ 253 (504)
++.+++..+|++ . +.| -..|+.+|..|++.+
T Consensus 188 la~~Lq~~~gvP----V--IDg-----v~Aav~~a~~L~~~~ 218 (230)
T COG4126 188 LADQLQKAFGVP----V--IDG-----VAAAVKLAEGLLGMG 218 (230)
T ss_pred HHHHHHHHhCCC----c--ccc-----hHHHHHHHHHHHhhc
Confidence 689999999965 2 333 566788888888765
No 247
>PRK08304 stage V sporulation protein AD; Validated
Probab=47.88 E-value=75 Score=33.09 Aligned_cols=87 Identities=20% Similarity=0.245 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC-----Cc--ceeEEe---------cCCcchHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR-----GN--IRSFNL---------GGMGCSAGVI 241 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~-----~~--~~~~dl---------~g~gCsg~l~ 241 (504)
|+..+.+=|+++|.+|+|-|+||..=- ...--.+...+..+-|+. .| +.-||. +|-|||+.+.
T Consensus 210 a~dti~~h~~d~~~~~~~yDli~tGDl-g~vG~~i~~~ll~~~g~~~~~~~~DcG~~iy~~~~q~~~aGgSGc~csa~v~ 288 (337)
T PRK08304 210 AADTIQQHFKDTGRSPEDYDLIVTGDL-GRVGREILKELLKEEGYDIGDNYNDCGLMIYDSEQQDVFAGGSGCACSAVVT 288 (337)
T ss_pred HHHHHHHHHHHcCCChhhccEEEEcch-HHHHHHHHHHHHHHhCCChhhcccccCeEEeccCCCcccCCCcccchhHHHH
Confidence 455666778899999999999886621 111112333344343431 12 345552 2347787776
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC
Q 010687 242 AIDLAKDMLQVHRNTYAVVVSTENI 266 (504)
Q Consensus 242 aL~lA~~lL~a~~~~~aLVVs~E~~ 266 (504)
.=.+-+. |+.+..+++|+|++-.+
T Consensus 289 ~~~~~~~-~~~g~~~rvl~v~tGaL 312 (337)
T PRK08304 289 YGYLLKE-LQKGKLKRVLVVATGAL 312 (337)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhh
Confidence 6555444 44677899999998764
No 248
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=47.37 E-value=39 Score=36.09 Aligned_cols=44 Identities=14% Similarity=0.016 Sum_probs=31.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
...|++++|+++|++|+|||.+-.. |.+..-.+.-+..|.+-||
T Consensus 280 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~al~~~fg 324 (414)
T PRK08722 280 GALAMEAAMRDAGVTGEQIGYVNAHGTSTPAGDVAEIKGIKRALG 324 (414)
T ss_pred HHHHHHHHHHHcCCCHHHcCEEEccCccCCCCCHHHHHHHHHHhc
Confidence 5678999999999999999988654 5443334444555666666
No 249
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=46.64 E-value=33 Score=36.59 Aligned_cols=44 Identities=16% Similarity=0.179 Sum_probs=33.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
..++++++|+++|++|+|||.+... |++..-.+.-+..|.+-||
T Consensus 277 ~~~ai~~AL~~Agi~p~dId~I~~Hgtgt~~~D~~E~~Ai~~~fg 321 (405)
T PRK09116 277 MQIAMELALKDAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFG 321 (405)
T ss_pred HHHHHHHHHHHhCCCHHHcCEEECcCccCCCCCHHHHHHHHHHhC
Confidence 4588999999999999999998754 5443334455566777777
No 250
>PLN03170 chalcone synthase; Provisional
Probab=46.14 E-value=75 Score=33.87 Aligned_cols=70 Identities=13% Similarity=0.155 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee-----E-EecCCcchHHHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS-----F-NLGGMGCSAGVIAIDLA 246 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~-dl~g~gCsg~l~aL~lA 246 (504)
-+.+.....++++|+++|++++|||..++.-. -+.+-..+.++||++++-.. + +.++|+.++-+.+|+-.
T Consensus 278 ~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqg----g~~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~ 353 (401)
T PLN03170 278 LISKNIERSLEEAFKPLGITDYNSIFWVAHPG----GPAILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEM 353 (401)
T ss_pred HHHHHHHHHHHHHHHhcCCCccccCeEEecCC----cHHHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 45666677889999999999999998765421 34556678999999754321 2 44555555666666554
No 251
>PRK09585 anmK anhydro-N-acetylmuramic acid kinase; Reviewed
Probab=45.75 E-value=57 Score=34.41 Aligned_cols=87 Identities=17% Similarity=0.257 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC--------chHHHHHHHcCCC--CcceeEEecCCcc
Q 010687 167 MAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP--------SLSAMIVNKYKLR--GNIRSFNLGGMGC 236 (504)
Q Consensus 167 ~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P--------s~a~~I~~~lGl~--~~~~~~dl~g~gC 236 (504)
+.+...+...+-.+|++++++++|+++++||+|=....+-+..| .-.+.|+++.|++ .|-++-|+.-.|=
T Consensus 62 l~~l~~~lg~~~a~av~~~~~~~~l~~~~id~IgsHGQTv~H~P~~~~TlQiG~~~~iA~~tgi~VV~DFR~~D~a~GGq 141 (365)
T PRK09585 62 LAELDTALGRLFAEAVNALLAEAGLSPEDIDAIGSHGQTVRHRPGEGFTLQIGDGALIAELTGITVVADFRRRDVAAGGQ 141 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccCccEEEeCCcccccCCCCCCeEEcCCHHHHHHHHCcCEEecChHHHHhcCCC
Confidence 44556667788899999999999999999998876644322222 2467899999986 2334556653333
Q ss_pred hHHHHHHHHHHHHHhcCCC
Q 010687 237 SAGVIAIDLAKDMLQVHRN 255 (504)
Q Consensus 237 sg~l~aL~lA~~lL~a~~~ 255 (504)
.+-+..+ ...+|-.++.
T Consensus 142 GAPLvp~--~~~~Lf~~~~ 158 (365)
T PRK09585 142 GAPLVPA--FHQALFGHPD 158 (365)
T ss_pred CCCchHH--HHHHHhcCCC
Confidence 3334433 2344444543
No 252
>PLN03173 chalcone synthase; Provisional
Probab=45.48 E-value=87 Score=33.27 Aligned_cols=51 Identities=10% Similarity=0.074 Sum_probs=38.7
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcc
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNI 226 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~ 226 (504)
+-+.......++++|+++|++++|||..++.- .-+.+-..++++||++++-
T Consensus 273 ~~~~~~~~~~i~~~L~~~gl~~~di~~~v~Hq----gg~~Il~~v~~~LgL~~ek 323 (391)
T PLN03173 273 GLISKNVEKSLTEAFKPLGISDWNSLFWIAHP----GGPAILDQVEAKLALKPEK 323 (391)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccccCeEEECC----CcHHHHHHHHHHcCCChHH
Confidence 34666677788999999999999999976542 1245667799999998553
No 253
>PF07736 CM_1: Chorismate mutase type I; InterPro: IPR008243 Chorismate mutase (CM; 5.4.99.5 from EC) catalyses the reaction at the branch point of the biosynthetic pathway leading to the three aromatic amino acids, phenylalanine, tryptophan and tyrosine (chorismic acid is the last common intermediate, and CM leads to the L-phenylalanine/L-tyrosine branch). It is part of the shikimate pathway, which is present only in bacteria, fungi and plants. This entry represents a family of monofunctional (non-fused) chorismate mutases from Gram-positive bacteria (Firmicutes) and cyanobacteria. Trusted members of the family are found in operons with other enzymes of the chorismate pathways, both up- and downstream of CM (Listeria, Bacillus, Oceanobacillus) or are the sole CM in the genome where the other members of the chorismate pathways are found elsewhere in the genome (Nostoc, Thermosynechococcus). They are monofunctional, homotrimeric, nonallosteric enzymes and are not regulated by the end-product aromatic amino acids. The three types of CM are AroQ class, Prokaryotic type (e.g., IPR008239 from INTERPRO amongst others); AroQ class, Eukaryotic type (IPR008238 from INTERPRO); and AroH class. They fall into two structural folds (AroQ class and AroH class) which are completely unrelated []. The two types of the AroQ structural class (the Escherichia coli CM dimer and the yeast CM monomer) can be structurally superimposed, and the topology of the four-helix bundle forming the active site is conserved []. For additional information please see [, , , , , , ].; PDB: 2CHS_K 2CHT_L 1COM_J 1FNJ_A 1FNK_A 1DBF_C 1UI9_A 1ODE_A 1UFY_A 1XHO_C ....
Probab=44.66 E-value=56 Score=28.77 Aligned_cols=55 Identities=9% Similarity=0.170 Sum_probs=34.3
Q ss_pred HHHHHHHHHHHHHhCCCCCCCcCEEEEeecCC--CCCCchHHHHHHHc-CCCCcceeEEecC
Q 010687 175 EQVMFGALDNLFANTNVKPKDIGILVVNCSLF--NPTPSLSAMIVNKY-KLRGNIRSFNLGG 233 (504)
Q Consensus 175 ~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~--~~~Ps~a~~I~~~l-Gl~~~~~~~dl~g 233 (504)
.+=..+-.++.+++.+++++||--+++.+++| ...|+.+ ++++ |+. +++-+...-
T Consensus 19 ~~at~eLl~~i~~~N~l~~~dIvSi~FT~T~DL~a~fPA~a---~R~~~g~~-~Vpl~c~~E 76 (118)
T PF07736_consen 19 LEATRELLEEILERNELSPEDIVSIIFTVTPDLDAAFPAAA---ARELPGWD-DVPLMCAQE 76 (118)
T ss_dssp HHHHHHHHHHHHHHTT--GGGEEEEEEEE-TT--SS-TCHH---HHHTTTGT-TSEEEEEE-
T ss_pred HHHHHHHHHHHHHHcCCCHHHEEEEEEEeCCCcCccChHHH---HHccCCCC-ccceeccCc
Confidence 33344455677888999999999999998765 4567543 4444 776 677666654
No 254
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations. PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.
Probab=44.30 E-value=48 Score=34.92 Aligned_cols=27 Identities=19% Similarity=0.361 Sum_probs=23.5
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEe
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVN 202 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~ 202 (504)
.-..+|++++|+++|++++|||.+...
T Consensus 279 ~~~~~a~~~al~~Agi~~~did~i~~h 305 (421)
T cd00833 279 EAQAALIRRAYARAGVDPSDIDYVEAH 305 (421)
T ss_pred HHHHHHHHHHHHHhCCCHHHCcEEEee
Confidence 345689999999999999999998765
No 255
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=43.78 E-value=39 Score=35.93 Aligned_cols=45 Identities=13% Similarity=0.027 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 177 VMFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
-..+|++++|+++|++|+|||.+-.. |.+..-.+.-...+.+.||
T Consensus 289 ~~~~a~~~Al~~Agi~p~dId~i~~hgtgt~~~D~~E~~al~~~fg 334 (424)
T PRK06333 289 GARRAMLIALRQAGIPPEEVQHLNAHATSTPVGDLGEVAAIKKVFG 334 (424)
T ss_pred HHHHHHHHHHHHcCCCHHHCCEEeccCCCCccchHHHHHHHHHHhC
Confidence 35788999999999999999998654 4332223334455677776
No 256
>KOG1406 consensus Peroxisomal 3-ketoacyl-CoA-thiolase P-44/SCP2 [Lipid transport and metabolism]
Probab=43.25 E-value=22 Score=35.63 Aligned_cols=29 Identities=21% Similarity=0.382 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEe
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVN 202 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~ 202 (504)
-.||...|++++++++|+.|+||+.+=..
T Consensus 270 gfdm~~~aa~~l~aksgltpndvqvielh 298 (408)
T KOG1406|consen 270 GFDMTRLAAKRLFAKSGLTPNDVQVIELH 298 (408)
T ss_pred cchHHHHHHHHHHHHcCCCcccceEEEee
Confidence 45788999999999999999999988544
No 257
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed
Probab=42.61 E-value=51 Score=35.30 Aligned_cols=45 Identities=13% Similarity=-0.002 Sum_probs=33.2
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
..++++++|+++|++|+|||.+-.. |++..-.+.-...|.+-||-
T Consensus 288 ~~~a~~~Al~~agi~~~did~ie~hgtgt~~~D~~E~~Al~~~fg~ 333 (418)
T PRK07910 288 AGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINNALGG 333 (418)
T ss_pred HHHHHHHHHHHhCCCHHHCCEEEcCCcCCCCCCHHHHHHHHHHhCC
Confidence 5678999999999999999998644 54433345555667777774
No 258
>TIGR02845 spore_V_AD stage V sporulation protein AD. Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.
Probab=41.91 E-value=1.1e+02 Score=31.79 Aligned_cols=87 Identities=16% Similarity=0.230 Sum_probs=51.5
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC-----Cc--ceeEEe--------cCCcchHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR-----GN--IRSFNL--------GGMGCSAGVIA 242 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~-----~~--~~~~dl--------~g~gCsg~l~a 242 (504)
|+..+.+=|+++|.+|++-|+|+..= ....--.+...+..+-|+. .| ..-||- +|-|||+.+..
T Consensus 204 a~dti~~h~~d~~~~~~~yd~i~tgd-lg~vg~~i~~~ll~~~g~~~~~~~~dcg~~iy~~~~~~~aggsgc~csa~v~~ 282 (327)
T TIGR02845 204 AADTIEAHFKDTGRSVDDYDLIVTGD-LARVGSEILRKLLKERGYDVTERYDDCGVMIYRPDQQVFAGGSGCACSAVVTY 282 (327)
T ss_pred HHHHHHHHHHHcCCChhhccEEEecc-hHHHHHHHHHHHHHHcCCChhhccccCCeEEEcCCCcccCCCcccchhHHHHH
Confidence 55566777889999999999988662 1111112233333333431 01 233332 33467776666
Q ss_pred HHHHHHHHhcCCCCeEEEEEeccC
Q 010687 243 IDLAKDMLQVHRNTYAVVVSTENI 266 (504)
Q Consensus 243 L~lA~~lL~a~~~~~aLVVs~E~~ 266 (504)
=.+-+. |+.+..+++|+|++-.+
T Consensus 283 ~~~~~~-~~~g~~~r~l~v~tgal 305 (327)
T TIGR02845 283 GHILKE-MLRGKLKKVLVVATGAL 305 (327)
T ss_pred HHHHHH-HhcCcceEEEEEEchhh
Confidence 555444 44567899999998764
No 259
>PRK06066 acetyl-CoA acetyltransferase; Provisional
Probab=41.68 E-value=69 Score=34.00 Aligned_cols=41 Identities=12% Similarity=0.083 Sum_probs=28.7
Q ss_pred HHHHHHHHHhCCCC--CCCcCEEEEe-ecCCCCCCchHHHHHHHcCCCC
Q 010687 179 FGALDNLFANTNVK--PKDIGILVVN-CSLFNPTPSLSAMIVNKYKLRG 224 (504)
Q Consensus 179 ~~Aa~~aL~~agi~--~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl~~ 224 (504)
..|++++++++|++ ++|||.+-++ + +....-+..+.||+.+
T Consensus 259 ~~Aa~~a~~~AGi~~p~~DiD~~ei~D~-----Ft~~~l~~~e~lG~~~ 302 (385)
T PRK06066 259 RIAADMAYKMAGIESPRKEVDAAEVDDR-----YSYKELQHIEALRLSE 302 (385)
T ss_pred HHHHHHHHHHcCCCCCHHHCcEEEEecC-----ChHHHHHHHHHcCCCC
Confidence 36999999999997 6999988655 3 2233344556666643
No 260
>PRK06065 acetyl-CoA acetyltransferase; Provisional
Probab=41.59 E-value=3.2e+02 Score=28.96 Aligned_cols=56 Identities=14% Similarity=-0.132 Sum_probs=35.6
Q ss_pred cccCEEEEcCCCHHHHHHHHHHcCCCch------------------hhhhhhhccccccccccchHHHHHHHHHH
Q 010687 395 LAFDHFCIHAGGRAVIDELEKNLQLLPE------------------HVEASRMTLHRFGNTSSSSIWYELAYTEA 451 (504)
Q Consensus 395 ~did~~~~Hq~g~~vl~~i~~~Lgl~~e------------------~~~~S~~~l~r~GNtsSasi~~~L~~~~~ 451 (504)
+|||.+-+|-.-..+--...+.||+-+. .+.+| --+-.+||...++=...+.++..
T Consensus 282 ~diD~~ei~D~Fs~~~l~~~E~lG~~~~G~~~~~~~~g~~~~~G~~pvN~~-GG~la~Ghp~gatG~~~~~e~~~ 355 (392)
T PRK06065 282 KEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSPS-GGLLGVGNPIAAAGLMKVISIYW 355 (392)
T ss_pred hhCcEEEecCCChHHHHHHHHHcCCCCCCcHHHHHHCCCccCCCCeeecCC-CccccCCCCccHHHHHHHHHHHH
Confidence 7899999999876665556678886543 11110 11223799887777777766544
No 261
>PLN03171 chalcone synthase-like protein; Provisional
Probab=41.05 E-value=91 Score=33.19 Aligned_cols=71 Identities=10% Similarity=0.083 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHh---------CCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee-----E-EecCCcc
Q 010687 172 EEAEQVMFGALDNLFAN---------TNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS-----F-NLGGMGC 236 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~---------agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~-dl~g~gC 236 (504)
++...++.+++++++++ .|++++||+.+++ +. -+.+-..+.++||++++-.. + +.+++++
T Consensus 275 ~~vp~~i~~~l~~~l~~~l~~~~~~~~g~~~~di~~~~H---q~--~~~il~~v~~~Lgl~~ek~~~s~~~l~~yGNtss 349 (399)
T PLN03171 275 RQVPGLIGDNIERCLLDAFAPLLGGDGGAEWNDLFWAVH---PG--SSAILDQVDAALGLEPEKLAASRRVLSDYGNMFG 349 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHhhcccccCCCcccceEEEc---CC--cHHHHHHHHHHcCCCHHHhHHHHHHHHHhCcchh
Confidence 34556666666666665 5788899987642 22 23566779999999754322 2 5555666
Q ss_pred hHHHHHHHHHH
Q 010687 237 SAGVIAIDLAK 247 (504)
Q Consensus 237 sg~l~aL~lA~ 247 (504)
++-..+|+-+.
T Consensus 350 aSip~~L~~~~ 360 (399)
T PLN03171 350 ATVIFALDELR 360 (399)
T ss_pred hhHHHHHHHHH
Confidence 66666776443
No 262
>PLN03172 chalcone synthase family protein; Provisional
Probab=40.90 E-value=56 Score=34.75 Aligned_cols=70 Identities=13% Similarity=0.149 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCccee-----E-EecCCcchHHHHHHHHH
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRS-----F-NLGGMGCSAGVIAIDLA 246 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~-----~-dl~g~gCsg~l~aL~lA 246 (504)
.+..-..+.++++|+++|++..|||..++.- .-+.+-..|+++||++++-.. + +.++|+.++.+.+|+-+
T Consensus 274 ~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hq----gg~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~ 349 (393)
T PLN03172 274 LISKNIEKSLVEAFAPIGINDWNSIFWIAHP----GGPAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEM 349 (393)
T ss_pred HHHHHHHHHHHHHhhhcCCCccccceEEecC----CcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHH
Confidence 3555566677889999999999999866542 124566779999999854332 2 34555555666666543
No 263
>PRK12404 stage V sporulation protein AD; Provisional
Probab=39.45 E-value=1.2e+02 Score=31.66 Aligned_cols=87 Identities=15% Similarity=0.222 Sum_probs=51.9
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCC------c--ceeEEe--------cCCcchHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRG------N--IRSFNL--------GGMGCSAGVI 241 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~------~--~~~~dl--------~g~gCsg~l~ 241 (504)
|+..+.+=|+++|.+|+|-|+|+..= ....--.+...+..+-|+.- | ..-||- +|-|||+.+.
T Consensus 208 A~dti~~h~~d~~~~~~~yDlI~TGD-Lg~vG~~i~~~ll~~~g~~~~~~~~~DCG~~iyd~~~~~~aGgSGcgcsA~v~ 286 (334)
T PRK12404 208 AVDTIEAHLRDRQIDASYYDLIVTGD-LGHVGREIAKDLLHKHGVKVPEEQFQDCGLLIYREGQPVIAGASGPGCSATVT 286 (334)
T ss_pred HHHHHHHHHHHhCCChhhccEEEEcc-hHHHHHHHHHHHHHHcCCCCCcccccccCeEEecCCCcccCCCcccchHHHHH
Confidence 55666777889999999999988652 11111123333444434321 1 233432 3446777666
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC
Q 010687 242 AIDLAKDMLQVHRNTYAVVVSTENI 266 (504)
Q Consensus 242 aL~lA~~lL~a~~~~~aLVVs~E~~ 266 (504)
.=.+-+. |+.+..+++|+|++-.+
T Consensus 287 ~g~~~~~-~~~g~~~rvL~v~TGAL 310 (334)
T PRK12404 287 YGHLLNR-MKRGELKRILVVATGAL 310 (334)
T ss_pred HHHHHHH-HhcCCceEEEEEEchhh
Confidence 5555444 44677899999998764
No 264
>PRK00768 nadE NAD synthetase; Reviewed
Probab=39.00 E-value=4.2e+02 Score=26.70 Aligned_cols=109 Identities=12% Similarity=0.135 Sum_probs=54.8
Q ss_pred hHHHHHHhhhcCCCChh-----hHHHHHHHHHHhCCCceEec-cCCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCC
Q 010687 118 FHQFMEHSRLTGDFDES-----SLEFQRKILERSGLGEETYV-PDAMHYLPPRPSMAAAREEAEQVMFGALDNLFANTNV 191 (504)
Q Consensus 118 ~~~~~~~~~~~~~~~~~-----~~~f~~~i~~~sGi~~r~~~-~~~~~~~~~~~~~~~~~~ea~~la~~Aa~~aL~~agi 191 (504)
++++++.++....++.+ ..+|++..++++|.+.--+- .-+.- .++ +..|+..| +..-+.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~i~~~L~~~l~~~g~~g~VlGlSGGID-----Sav------~a~L~~~A----~~~~~~ 67 (268)
T PRK00768 3 QQEIIAELGVKPTIDPEEEIRRRVDFLKDYLKKSGLKSLVLGISGGQD-----STL------AGRLAQLA----VEELRA 67 (268)
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCeEEEECCCCHH-----HHH------HHHHHHHH----HHHhcc
Confidence 45666666654444443 24677778888886553321 12220 000 22233333 332222
Q ss_pred CCCCcCEEEE-eecCCC--CCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHH
Q 010687 192 KPKDIGILVV-NCSLFN--PTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAI 243 (504)
Q Consensus 192 ~~~dId~LI~-~~s~~~--~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL 243 (504)
+-...+..++ .+.|.. .....+..+++.+|+. +...+|+. ....++...+
T Consensus 68 ~~~~~~~~~~~l~mP~~~~~~~~da~~la~~lgi~-~~~~i~I~-~~~~~~~~~l 120 (268)
T PRK00768 68 ETGDDDYQFIAVRLPYGVQADEDDAQDALAFIQPD-RVLTVNIK-PAVDASVAAL 120 (268)
T ss_pred cccCcceeEEEEECCCCCcCCHHHHHHHHHhcCCC-eeEEEECH-HHHHHHHHHH
Confidence 1111112222 244432 2345677899999984 36788888 4666665544
No 265
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2.3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....
Probab=37.93 E-value=1.4e+02 Score=29.38 Aligned_cols=68 Identities=15% Similarity=0.164 Sum_probs=40.9
Q ss_pred ccccCEEEEc----CCCHHHHHHHHHHcCCCchhhhhhhhccccccccccchHHHHHHHHHHcCCCCCCCEEEEEeec
Q 010687 394 KLAFDHFCIH----AGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFG 467 (504)
Q Consensus 394 ~~did~~~~H----q~g~~vl~~i~~~Lgl~~e~~~~S~~~l~r~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG 467 (504)
.+||+|++.- .....+--.+.+.|||+++-- |.-+.-.|--++.+.+-.-.++.+. .||.+|++++.=
T Consensus 119 ~~dIthlv~vs~TG~~~PglD~~l~~~LgL~~~v~---R~~i~~~GC~gg~~~L~~A~~~~~~---~p~a~VLvv~vE 190 (226)
T PF00195_consen 119 PSDITHLVTVSCTGIAAPGLDARLINRLGLRPDVQ---RTPIFGMGCAGGAAGLRRAKDIARA---NPGARVLVVCVE 190 (226)
T ss_dssp GGGECEEEEEESSSSECS-HHHHHHHHHT--TTSE---EEEEES-GGGHHHHHHHHHHHHHHH---STT-EEEEEEEE
T ss_pred CcccceEEEEecCCcCCCchhHHHHhcCCCCCCcE---EEEEeccchhhHHHHHHHHHHHHhC---CccceEEEEEEE
Confidence 4899999962 233444557899999988633 5566666666666555333344333 589999998764
No 266
>COG1153 FwdD Formylmethanofuran dehydrogenase subunit D [Energy production and conversion]
Probab=36.42 E-value=31 Score=30.35 Aligned_cols=50 Identities=18% Similarity=0.256 Sum_probs=33.6
Q ss_pred chHHHHHHHHHHcCCCCCCCEEEEEe-echhHHhhheeeEeeccCC-CCC-----CCCCccccc
Q 010687 440 SSIWYELAYTEAKGRMRRGNRVWQIA-FGSGFKCNSAVWQALRNVK-PSP-----NSPWEDCID 496 (504)
Q Consensus 440 asi~~~L~~~~~~g~i~~Gd~Vlli~-fG~G~~~~sav~r~~~~~~-~~~-----~~~w~~~~~ 496 (504)
|.++++=+++.+-| ++.||+|.+-+ || .+|+++-.+-. ++. .+||+.++-
T Consensus 31 a~~~inp~D~~~Lg-v~EGD~VkVkse~G------eVVV~Ak~~~~~~pG~vfiPmgpWaN~vi 87 (128)
T COG1153 31 AVCEINPEDMKQLG-VSEGDKVKVKSEFG------EVVVKAKEADGVQPGMVFIPMGPWANVVI 87 (128)
T ss_pred eEEEECHHHHHHhC-CCcCCeEEEEecCc------cEEEEEeeCCCCCCCeEEecCCcccceee
Confidence 44455556666654 78999999877 77 66777765532 112 589999864
No 267
>TIGR01991 HscA Fe-S protein assembly chaperone HscA. The Heat Shock Cognate proteins HscA and HscB act together as chaperones. HscA resembles DnaK but belongs in a separate clade. The apparent function is to aid assembly of iron-sulfur cluster proteins. Homologs from Buchnera and Wolbachia are clearly in the same clade but are highly derived and score lower than some examples of DnaK.
Probab=34.29 E-value=2.2e+02 Score=32.01 Aligned_cols=56 Identities=9% Similarity=0.090 Sum_probs=40.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC
Q 010687 167 MAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 167 ~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
+++.-++..+=..+.++++|+++|+++++||.|+.+.. ...+|.+-.+|.+.+|..
T Consensus 284 fe~l~~~ll~~i~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~V~~~l~~~f~~~ 339 (599)
T TIGR01991 284 FEALIQPLVQKTLSICRRALRDAGLSVEEIKGVVLVGG-STRMPLVRRAVAELFGQE 339 (599)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCCEEEEECC-cCCChHHHHHHHHHhCCC
Confidence 33333333444667789999999999999999886631 235799999999999864
No 268
>KOG1394 consensus 3-oxoacyl-(acyl-carrier-protein) synthase (I and II) [Lipid transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=34.25 E-value=43 Score=35.10 Aligned_cols=46 Identities=13% Similarity=0.094 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHhCCCCCCCcCEEE-EeecCCCCCCchHHHHHHHcCC
Q 010687 177 VMFGALDNLFANTNVKPKDIGILV-VNCSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 177 la~~Aa~~aL~~agi~~~dId~LI-~~~s~~~~~Ps~a~~I~~~lGl 222 (504)
=+..|.+++|+++|+.|+|||.|= ++||+..-.-.-+..|.+-|+-
T Consensus 302 Ga~~am~raL~~Agl~pe~i~YvNAHATST~~GD~aE~~Ai~~vf~~ 348 (440)
T KOG1394|consen 302 GAVLAMERALKDAGLSPEDIDYVNAHATSTPLGDAAEAEAIKRVFGE 348 (440)
T ss_pred hHHHHHHHHHHHcCCChhhcCeeecccccCcCchHHHHHHHHHHhcc
Confidence 367889999999999999999885 5566432111223345555553
No 269
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase
Probab=33.50 E-value=86 Score=33.69 Aligned_cols=44 Identities=9% Similarity=0.104 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lG 221 (504)
...|++++|+++|++|+|||.+-.. +.+..-.+.-...+..-+|
T Consensus 301 ~~~a~~~Al~~Agi~~~dId~ve~hgtgt~~~D~~E~~ai~~~~~ 345 (437)
T PLN02836 301 AVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKTVFS 345 (437)
T ss_pred HHHHHHHHHHHcCCCHhHcCEEEccCCcCcCcCHHHHHHHHHHhc
Confidence 5678999999999999999998655 4332222322333444444
No 270
>PRK05183 hscA chaperone protein HscA; Provisional
Probab=33.47 E-value=2.2e+02 Score=32.17 Aligned_cols=50 Identities=8% Similarity=0.068 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC
Q 010687 173 EAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 173 ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
+..+=..+.++++|+++|+++++||.|+.... ....|.+..+|.+.+|..
T Consensus 306 ~l~~~~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~l~~~fg~~ 355 (616)
T PRK05183 306 PLVKRTLLACRRALRDAGVEADEVKEVVMVGG-STRVPLVREAVGEFFGRT 355 (616)
T ss_pred HHHHHHHHHHHHHHHHcCCCcccCCEEEEECC-cccChHHHHHHHHHhccC
Confidence 33333566778999999999999999987631 125788999999999865
No 271
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long. This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.
Probab=33.40 E-value=43 Score=34.39 Aligned_cols=87 Identities=17% Similarity=0.221 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCc-------ceeEEe---------cCCcchHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGN-------IRSFNL---------GGMGCSAGVI 241 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~-------~~~~dl---------~g~gCsg~l~ 241 (504)
|+..+.+=|+++|.+|+|-|+||..=- ...--.+...+.++-|+.-. +.-||. +|-|||+.+.
T Consensus 205 A~dTI~~h~~D~g~~p~dYDlIvTGDL-g~vG~~il~~Ll~~~G~~i~~~~~DCG~~iyd~~~Qdv~aGGSGcgCSA~V~ 283 (329)
T PF07451_consen 205 AADTIEQHFKDTGRSPDDYDLIVTGDL-GKVGRKILRDLLKEKGYDISENYNDCGLMIYDPEKQDVHAGGSGCGCSAVVL 283 (329)
T ss_dssp HHHHHHHHHHHCT--GGG-SEEEESS--HHHHHHHHHHHHHHTT---GGGEEEHHHCSS-TT-S--TT-EESHHHHHHHH
T ss_pred HHHHHHHHHHHhCCChhhcCeEEecch-HHHHHHHHHHHHHHcCCCCccccccCCeEeecCCccccccCCCCcchHHHHH
Confidence 455566678899999999999987610 00111233444555554311 112222 2456777666
Q ss_pred HHHHHHHHHhcCCCCeEEEEEeccC
Q 010687 242 AIDLAKDMLQVHRNTYAVVVSTENI 266 (504)
Q Consensus 242 aL~lA~~lL~a~~~~~aLVVs~E~~ 266 (504)
.=.+-+. |+.+..+++|+|++-.+
T Consensus 284 ~g~ll~~-l~~g~~krvL~vaTGAL 307 (329)
T PF07451_consen 284 CGYLLPK-LRKGELKRVLFVATGAL 307 (329)
T ss_dssp HHCHHHH-HHTTS-SEEEEEEEEE-
T ss_pred HHHHHHH-HHcCCceEEEEEEchhh
Confidence 6555544 45677899999998764
No 272
>KOG1389 consensus 3-oxoacyl CoA thiolase [Lipid transport and metabolism]
Probab=33.32 E-value=1.2e+02 Score=31.34 Aligned_cols=69 Identities=16% Similarity=0.179 Sum_probs=42.1
Q ss_pred HHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCc-------ceeEEecCCcchHHHHHHHHHHHHHhc
Q 010687 180 GALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGN-------IRSFNLGGMGCSAGVIAIDLAKDMLQV 252 (504)
Q Consensus 180 ~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~-------~~~~dl~g~gCsg~l~aL~lA~~lL~a 252 (504)
-|+..+|+++|+..+|||+.=.|- .+.|-..+-.++||++++ +.++.-. .||+|.=.-.-+-..|=+.
T Consensus 324 vAIp~alk~aGL~v~did~FEINE----AFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHP-lGatGAR~VaTlL~emKrr 398 (435)
T KOG1389|consen 324 VAIPKALKAAGLEVDDIDLFEINE----AFASQALYCRNKLGLDPEKVNVNGGAIALGHP-LGATGARCVATLLHEMKRR 398 (435)
T ss_pred hhhHHHHHHcCCcccccceeehhH----HHHHHHHHHHHHhCCCHHHcCCCCceeeccCC-cCCccHhHHHHHHHHHHhh
Confidence 478899999999999999765441 123344556788888632 2333333 4677765444444444433
Q ss_pred C
Q 010687 253 H 253 (504)
Q Consensus 253 ~ 253 (504)
+
T Consensus 399 g 399 (435)
T KOG1389|consen 399 G 399 (435)
T ss_pred c
Confidence 3
No 273
>PRK13410 molecular chaperone DnaK; Provisional
Probab=32.30 E-value=1.5e+02 Score=33.94 Aligned_cols=73 Identities=12% Similarity=0.131 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHH
Q 010687 167 MAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAI 243 (504)
Q Consensus 167 ~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL 243 (504)
+++--++..+-..+.++++|+++|+++++||.|+.+... ..+|.+-.+|.+.+|... ..+++..-|.+.-.|+
T Consensus 300 FE~l~~~l~~r~~~~i~~~L~~ag~~~~dId~VvLVGGs-sRiP~V~~~l~~~fg~~~---~~~~npdeaVA~GAAi 372 (668)
T PRK13410 300 FESLCGDLLDRLLRPVKRALKDAGLSPEDIDEVVLVGGS-TRMPMVQQLVRTLIPREP---NQNVNPDEVVAVGAAI 372 (668)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCc-cccHHHHHHHHHHcCCCc---ccCCCCchHHHHhHHH
Confidence 333334444446677899999999999999998876321 357888899999998542 3344433344433333
No 274
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=31.17 E-value=3e+02 Score=28.28 Aligned_cols=106 Identities=10% Similarity=0.197 Sum_probs=60.1
Q ss_pred CCCceEEEEeeeecCCCCceechHHHHHHhhhcCCCChhhHHHHHHHHHHhCCCceEeccCCCcCCCCCCcHHHHHHHHH
Q 010687 96 RPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAE 175 (504)
Q Consensus 96 ~~~~v~Iv~~~~~~P~~~~~vt~~~~~~~~~~~~~~~~~~~~f~~~i~~~sGi~~r~~~~~~~~~~~~~~~~~~~~~ea~ 175 (504)
....-||++.++| |.+ =+..+........ .+|- .=|.++|....||..|.+-.+-.. + ..
T Consensus 209 HsgsdYiISrATF-P~Y--FiKeq~vv~~s~t--~iDl--~iFr~~iA~aLgIThRfVG~EP~c-----~--------vT 268 (352)
T COG3053 209 HSGSDYIISRATF-PAY--FIKEQSVVNDSQT--EIDL--KIFRKYIAPALGITHRFVGTEPFC-----R--------VT 268 (352)
T ss_pred ecCCCeEEEeccc-chh--hhhhHHHHHHHHH--HHHH--HHHHHHHHHHhCcceeeecCCCCc-----H--------HH
Confidence 4556799999988 773 2333332222221 0121 125556888899999876433221 1 12
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcC
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYK 221 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lG 221 (504)
..=-+..++-|++.+++.--|++++.--......|-.|+.+...+.
T Consensus 269 ~~YNq~M~~~L~~~~~~~p~I~vvei~Rk~~~~~~ISAS~VR~~l~ 314 (352)
T COG3053 269 AIYNQQMRYWLEDPTISAPPIEVVEIERKKYQEMPISASRVRQLLA 314 (352)
T ss_pred HHHHHHHHHHHhccCCCCCceEEEEeehhhhcCCcccHHHHHHHHH
Confidence 2223455678888888888899888774333344544555555443
No 275
>KOG1391 consensus Acetyl-CoA acetyltransferase [Lipid transport and metabolism]
Probab=28.74 E-value=70 Score=32.07 Aligned_cols=49 Identities=24% Similarity=0.399 Sum_probs=35.4
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecC
Q 010687 179 FGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGG 233 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g 233 (504)
+.|++.+|+++|++.+|||++=+|-. ..|. .-.+++.|+++ +.-.|++|
T Consensus 296 vPAI~~vLKksGlkl~DiDl~EvNEA---FApQ-~LAv~r~L~ld--~sKlNVNG 344 (396)
T KOG1391|consen 296 VPAISGVLKKSGLKLKDIDLVEVNEA---FAPQ-YLAVERSLDLD--ISKLNVNG 344 (396)
T ss_pred cHHHHHHHHHcCCcccccceEEechh---hchH-HHHHHHhhCCC--hhhccccC
Confidence 46899999999999999998877732 1222 23467788874 66777775
No 276
>COG2377 Predicted molecular chaperone distantly related to HSP70-fold metalloproteases [Posttranslational modification, protein turnover, chaperones]
Probab=27.50 E-value=1.2e+02 Score=32.06 Aligned_cols=67 Identities=15% Similarity=0.196 Sum_probs=46.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCC----------chHHHHHHHcCCCC--cceeEEec
Q 010687 166 SMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTP----------SLSAMIVNKYKLRG--NIRSFNLG 232 (504)
Q Consensus 166 ~~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~P----------s~a~~I~~~lGl~~--~~~~~dl~ 232 (504)
.+.+.+++-..+-..|+..++++.++.|+||+.|.+...+-...| ....+|+++.|++. |.++=|+.
T Consensus 63 ~~~~l~~~l~~~~a~av~~ll~~~~l~~~~i~~iG~HGQTV~H~p~~~~~~t~Qlgd~~~iA~~TGi~~v~dfR~~D~a 141 (371)
T COG2377 63 ELAELDRALALLHAQAVAALLAEQGLLPRDIRAIGCHGQTVLHRPPGHAPDTVQLGDGPLIAELTGITVVGDFRRRDMA 141 (371)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHhCceeecCCccccCCCCCCCCceeecCchHHHHHHhCCccHhhhcccccc
Confidence 345666777788889999999999999999997766533322111 24678999999862 23344555
No 277
>cd01453 vWA_transcription_factor_IIH_type Transcription factors IIH type: TFIIH is a multiprotein complex that is one of the five general transcription factors that binds RNA polymerase II holoenzyme. Orthologues of these genes are found in all completed eukaryotic genomes and all these proteins contain a VWA domain. The p44 subunit of TFIIH functions as a DNA helicase in RNA polymerase II transcription initiation and DNA repair, and its transcriptional activity is dependent on its C-terminal Zn-binding domains. The function of the vWA domain is unclear, but may be involved in complex assembly. The MIDAS motif is not conserved in this sub-group.
Probab=26.68 E-value=1.7e+02 Score=27.32 Aligned_cols=82 Identities=12% Similarity=0.107 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhC--CCCCCCcCEEEE-eecCCCCCC--chHHHHHHHcCCCCcceeEEecCCcchHHHHHHHHHHHHHh
Q 010687 177 VMFGALDNLFANT--NVKPKDIGILVV-NCSLFNPTP--SLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQ 251 (504)
Q Consensus 177 la~~Aa~~aL~~a--gi~~~dId~LI~-~~s~~~~~P--s~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL~lA~~lL~ 251 (504)
-+..++++.+++- .-.-+.|+++++ +.+.....| +....+...+. .. .. . .|-.+.-.||.+|.++++
T Consensus 28 ~ak~~~~~fi~~~~~~~~~~~vglv~f~~~~a~~~~PlT~D~~~~~~~L~---~~--~~-~-~G~t~l~~aL~~A~~~l~ 100 (183)
T cd01453 28 VVLKLLELFIEEFFDQNPISQLGIISIKNGRAEKLTDLTGNPRKHIQALK---TA--RE-C-SGEPSLQNGLEMALESLK 100 (183)
T ss_pred HHHHHHHHHHHHHhhcCccccEEEEEEcCCccEEEECCCCCHHHHHHHhh---cc--cC-C-CCchhHHHHHHHHHHHHh
Confidence 3445555555431 223357999999 555443333 22234555543 12 11 2 244678899999999997
Q ss_pred cCC---CCeEEEEEecc
Q 010687 252 VHR---NTYAVVVSTEN 265 (504)
Q Consensus 252 a~~---~~~aLVVs~E~ 265 (504)
..+ .++++|+.++.
T Consensus 101 ~~~~~~~~~iiil~sd~ 117 (183)
T cd01453 101 HMPSHGSREVLIIFSSL 117 (183)
T ss_pred cCCccCceEEEEEEcCC
Confidence 532 35678887663
No 278
>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=26.49 E-value=63 Score=31.38 Aligned_cols=39 Identities=28% Similarity=0.343 Sum_probs=29.1
Q ss_pred ccccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHhhh
Q 010687 434 FGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNS 474 (504)
Q Consensus 434 ~GNtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~~s 474 (504)
+|-|-|+ |...+.+.+.=.+++||+|+=||-|+||..+.
T Consensus 51 ~gqtis~--P~~vA~m~~~L~~~~g~~VLEIGtGsGY~aAv 89 (209)
T COG2518 51 CGQTISA--PHMVARMLQLLELKPGDRVLEIGTGSGYQAAV 89 (209)
T ss_pred CCceecC--cHHHHHHHHHhCCCCCCeEEEECCCchHHHHH
Confidence 4555444 66667776666789999999999999987543
No 279
>PRK08142 acetyl-CoA acetyltransferase; Provisional
Probab=25.48 E-value=82 Score=33.43 Aligned_cols=40 Identities=18% Similarity=0.128 Sum_probs=28.0
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEe-ecCCCCCCchHHHHHHHcCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVN-CSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~-~s~~~~~Ps~a~~I~~~lGl 222 (504)
...|++++++++|++|+|||++=+. | ++...-+..+.||+
T Consensus 257 ~~~aa~~a~~~AGi~~~did~~elyD~-----Fs~~~~~~~E~lGl 297 (388)
T PRK08142 257 AAWSGPAAFAEAGVTPADIKYASIYDS-----FTITVLMQLEDLGF 297 (388)
T ss_pred HHHHHHHHHHHcCCCHHHCCEEEEecc-----chHHHHHHHHHcCC
Confidence 4579999999999999999977443 3 22333444556665
No 280
>PLN03184 chloroplast Hsp70; Provisional
Probab=24.87 E-value=2.3e+02 Score=32.49 Aligned_cols=68 Identities=10% Similarity=0.078 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHH
Q 010687 172 EEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAI 243 (504)
Q Consensus 172 ~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL 243 (504)
++..+=....++++|++++++++|||.|+.+... ..+|.+-.+|.+.+|... ...++..-|.+.-.|+
T Consensus 342 ~~l~~r~~~~i~~~L~~a~~~~~dId~ViLvGGs-sriP~V~~~i~~~fg~~~---~~~~npdeaVA~GAAi 409 (673)
T PLN03184 342 SDLLDRCKTPVENALRDAKLSFKDIDEVILVGGS-TRIPAVQELVKKLTGKDP---NVTVNPDEVVALGAAV 409 (673)
T ss_pred HHHHHHHHHHHHHHHHHcCCChhHccEEEEECCc-cccHHHHHHHHHHhCCCc---ccccCcchHHHHHHHH
Confidence 3334445667889999999999999999876321 247999999999998642 3345533344333333
No 281
>PRK08329 threonine synthase; Validated
Probab=24.48 E-value=72 Score=33.20 Aligned_cols=63 Identities=24% Similarity=0.299 Sum_probs=42.5
Q ss_pred HHHHHHHH----cCCCchhhhhhhhcccccc---ccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHH
Q 010687 409 VIDELEKN----LQLLPEHVEASRMTLHRFG---NTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFK 471 (504)
Q Consensus 409 vl~~i~~~----Lgl~~e~~~~S~~~l~r~G---NtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~ 471 (504)
.++.+.+. ..++++++......+.+.| -.+|+..+..+..+.++|.+++|++|+++--|+|++
T Consensus 276 ~~~~l~~~~g~~~~V~d~e~~~a~~~l~~~Gi~vepssa~a~Aa~~~l~~~g~i~~~~~Vv~~~TG~glK 345 (347)
T PRK08329 276 MLRALEESNGFCISVGEEETRAALHWLRRMGFLVEPTSAVALAAYWKLLEEGLIEGGSKVLLPLSGSGLK 345 (347)
T ss_pred HHHHHHHhCCEEEEECHHHHHHHHHHHHhcCceECccHHHHHHHHHHHHHhCCCCCCCeEEEEeCCCCcc
Confidence 44555443 3456655543333333322 245777888888889999999999999999999976
No 282
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated
Probab=24.23 E-value=1.6e+02 Score=31.29 Aligned_cols=24 Identities=13% Similarity=0.293 Sum_probs=21.3
Q ss_pred HHHHHHHHHhCCCCCCCcCEEEEe
Q 010687 179 FGALDNLFANTNVKPKDIGILVVN 202 (504)
Q Consensus 179 ~~Aa~~aL~~agi~~~dId~LI~~ 202 (504)
.++++++|+++|++|+|||.+-..
T Consensus 284 ~~a~~~Al~~Agi~~~dId~v~~h 307 (410)
T PRK07103 284 MRVIRAALRRAGLGPEDIDYVNPH 307 (410)
T ss_pred HHHHHHHHHHcCCCHHHCCEEEcc
Confidence 589999999999999999988654
No 283
>TIGR03844 cysteate_syn cysteate synthase. Members of this family are cysteate synthase, an enzyme of alternate pathway to sulfopyruvate, a precursor of coenzyme M.
Probab=24.22 E-value=1.5e+02 Score=31.54 Aligned_cols=65 Identities=14% Similarity=0.123 Sum_probs=48.7
Q ss_pred HHHHHHHHHcC----CCchhhhhhhhcccc-cc---ccccchHHHHHHHHHHcCCCCCCCEEEEEeechhHHh
Q 010687 408 AVIDELEKNLQ----LLPEHVEASRMTLHR-FG---NTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKC 472 (504)
Q Consensus 408 ~vl~~i~~~Lg----l~~e~~~~S~~~l~r-~G---NtsSasi~~~L~~~~~~g~i~~Gd~Vlli~fG~G~~~ 472 (504)
.+++.+++.-| ++++++......|.+ -| -.+||..+-.|..+.++|.+++|++|+++--|.|++-
T Consensus 310 ~~l~air~~~g~~v~Vsd~eI~~A~~~l~~~~gi~vEpa~A~alAal~k~~~~g~i~~~~~Vv~vlTG~glK~ 382 (398)
T TIGR03844 310 GVFDALIATGGQMYGVSNKEAVSAGKLFEESEGIDILPAAAVAVAALVKAVESGFIGPDDDILLNITGGGYKR 382 (398)
T ss_pred HHHHHHHHhCCEEEEECHHHHHHHHHHHHhhCCccccccHHHHHHHHHHHHHhCCCCCCCeEEEEECCcchhh
Confidence 35777776554 678877765555553 44 4577777888888888899999999999999999763
No 284
>CHL00094 dnaK heat shock protein 70
Probab=23.86 E-value=2.4e+02 Score=31.81 Aligned_cols=47 Identities=11% Similarity=0.178 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC
Q 010687 176 QVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 176 ~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
+-....++++|+++|+++++||.|+..... ...|.+-.++.+.+|..
T Consensus 309 ~~~~~~i~~~L~~a~~~~~~i~~ViLvGGs-sriP~v~~~l~~~fg~~ 355 (621)
T CHL00094 309 NRCRIPVENALKDAKLDKSDIDEVVLVGGS-TRIPAIQELVKKLLGKK 355 (621)
T ss_pred HHHHHHHHHHHHHcCCChhhCcEEEEECCc-cCChHHHHHHHHHhCCC
Confidence 334556789999999999999998876422 35799999999999854
No 285
>PRK00290 dnaK molecular chaperone DnaK; Provisional
Probab=23.34 E-value=2.6e+02 Score=31.61 Aligned_cols=54 Identities=7% Similarity=0.156 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCC
Q 010687 169 AAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 169 ~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
+.-++..+=..+.++++|+++|+++++||.|+.+.. ....|.+-.+|.+.+|..
T Consensus 300 ~l~~~l~~~~~~~i~~~l~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~fg~~ 353 (627)
T PRK00290 300 ELTEDLVERTIEPCKQALKDAGLSVSDIDEVILVGG-STRMPAVQELVKEFFGKE 353 (627)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECC-cCCChHHHHHHHHHhCCC
Confidence 333334444667789999999999999999887632 124799999999999854
No 286
>PTZ00186 heat shock 70 kDa precursor protein; Provisional
Probab=23.09 E-value=3.2e+02 Score=31.28 Aligned_cols=62 Identities=11% Similarity=0.077 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCCCCcceeEEecCCcchHHHHHH
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAI 243 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~~~~~~~dl~g~gCsg~l~aL 243 (504)
....++++|+++|+++++||.|+.... ...+|.+-.+|.+.+|..+ . .+++-.-|.+.-.|+
T Consensus 336 ~~~~v~~~L~~a~~~~~dId~VvLVGG-ssriP~V~~~l~~~fg~~~-~--~~~nPdeaVA~GAAi 397 (657)
T PTZ00186 336 SIAPCKQCMKDAGVELKEINDVVLVGG-MTRMPKVVEEVKKFFQKDP-F--RGVNPDEAVALGAAT 397 (657)
T ss_pred HHHHHHHHHHHcCCChhhCCEEEEECC-cccChHHHHHHHHHhCCCc-c--ccCCCchHHHHhHHH
Confidence 556688899999999999999887631 1257999999999998642 2 344433444433333
No 287
>TIGR02350 prok_dnaK chaperone protein DnaK. Members of this family are the chaperone DnaK, of the DnaK-DnaJ-GrpE chaperone system. All members of the seed alignment were taken from completely sequenced bacterial or archaeal genomes and (except for Mycoplasma sequence) found clustered with other genes of this systems. This model excludes DnaK homologs that are not DnaK itself, such as the heat shock cognate protein HscA (TIGR01991). However, it is not designed to distinguish among DnaK paralogs in eukaryotes. Note that a number of dnaK genes have shadow ORFs in the same reverse (relative to dnaK) reading frame, a few of which have been assigned glutamate dehydrogenase activity. The significance of this observation is unclear; lengths of such shadow ORFs are highly variable as if the presumptive protein product is not conserved.
Probab=22.55 E-value=2.4e+02 Score=31.63 Aligned_cols=55 Identities=5% Similarity=0.152 Sum_probs=40.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCC
Q 010687 167 MAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 167 ~~~~~~ea~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl 222 (504)
+++.-++..+=..+.++++|+++|+++++||.|+..... ...|.+-..|.+.+|.
T Consensus 296 fe~l~~~l~~~~~~~i~~~l~~a~~~~~~i~~V~LvGGs-sriP~v~~~i~~~f~~ 350 (595)
T TIGR02350 296 FEELTADLVERTKEPVRQALKDAGLSASDIDEVILVGGS-TRIPAVQELVKDFFGK 350 (595)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHhHCcEEEEECCc-ccChHHHHHHHHHhCC
Confidence 333333344446677889999999999999999876321 2479999999999984
No 288
>PLN02854 3-ketoacyl-CoA synthase
Probab=22.52 E-value=4e+02 Score=29.64 Aligned_cols=42 Identities=10% Similarity=0.175 Sum_probs=31.3
Q ss_pred HHHHHHHHHHhCCCCC------CCcCEEEEeecCCCCCCchHHHHHHHcCCC
Q 010687 178 MFGALDNLFANTNVKP------KDIGILVVNCSLFNPTPSLSAMIVNKYKLR 223 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~------~dId~LI~~~s~~~~~Ps~a~~I~~~lGl~ 223 (504)
+...+++.|+++|+++ ++||+.+..- .-...-..++++||++
T Consensus 387 ~~~~i~~~L~~~gl~~~~pd~~~didhf~iHq----ggr~IId~v~k~LgL~ 434 (521)
T PLN02854 387 FVTLVRRKLLKAKVKPYIPDFKLAFEHFCIHA----GGRAVLDELQKNLQLS 434 (521)
T ss_pred HHHHHHHHHHHcCCCccCCcccccCcEEEECC----CCHHHHHHHHHHcCCC
Confidence 5678899999999987 5888776542 1234556789999996
No 289
>PRK13411 molecular chaperone DnaK; Provisional
Probab=20.85 E-value=2.7e+02 Score=31.69 Aligned_cols=48 Identities=13% Similarity=0.248 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCC
Q 010687 174 AEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 174 a~~la~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl 222 (504)
..+=..+.++++|+++|+++++||.|+.... ....|.+-.+|.+.+|-
T Consensus 306 l~~~~~~~i~~~L~~a~~~~~~id~ViLvGG-ssriP~v~~~l~~~f~~ 353 (653)
T PRK13411 306 LVEATIEPMQQALKDAGLKPEDIDRVILVGG-STRIPAVQEAIQKFFGG 353 (653)
T ss_pred HHHHHHHHHHHHHHHcCCCHHHCcEEEEECC-CCCcchHHHHHHHHcCC
Confidence 3333567789999999999999998886631 13578899999999974
No 290
>PTZ00009 heat shock 70 kDa protein; Provisional
Probab=20.08 E-value=3.1e+02 Score=31.19 Aligned_cols=44 Identities=7% Similarity=0.244 Sum_probs=35.4
Q ss_pred HHHHHHHHHHhCCCCCCCcCEEEEeecCCCCCCchHHHHHHHcCC
Q 010687 178 MFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKL 222 (504)
Q Consensus 178 a~~Aa~~aL~~agi~~~dId~LI~~~s~~~~~Ps~a~~I~~~lGl 222 (504)
....++++|+++++++++||.|+.... ....|.+-.+|.+.+|-
T Consensus 315 ~~~~i~~~L~~a~~~~~~i~~ViLvGG-ssriP~v~~~i~~~f~~ 358 (653)
T PTZ00009 315 TLQPVEKVLKDAGMDKRSVHEVVLVGG-STRIPKVQSLIKDFFNG 358 (653)
T ss_pred HHHHHHHHHHHcCCCHHHCcEEEEECC-CCCChhHHHHHHHHhCC
Confidence 456789999999999999999887632 13578999999999974
Done!