Citrus Sinensis ID: 010687

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500----
MSTINGGGVQIRQSRRLPDFLQSVNLKYVKLGYHYLMTHLLTLLLVPLMAVIIIEASQMNPDDMHQLWLHLKYNLVSVIICSAVLVFGSTVYIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVKPSPNSPWEDCIDKYPVQTVT
cccccccccEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccEEEEEcccccccccccccHHHHHHHHHHcccccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEcccccccccHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEEEEccccccccccccccccccccccccEEEEEEcccccccccccEEEEEEEEcccccccccccEEEEEccccccEEEEcccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccccccccccccEEEEccccHHHHHHHHHHccccHHHHHHHHHHHHHcccccccHHHHHHHHHHHccccccccEEEEEEEcccccccHHHHEEEcccccccccccccccccccccccc
***************RLPDFLQSVNLKYVKLGYHYLMTHLLTLLLVPLMAVIIIEASQMNPDDMHQLWLHLKYNLVSVIICSAVLVFGSTVYIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVKPSPNSPWEDCIDKYPVQT**
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MSTINGGGVQIRQSRRLPDFLQSVNLKYVKLGYHYLMTHLLTLLLVPLMAVIIIEASQMNPDDMHQLWLHLKYNLVSVIICSAVLVFGSTVYIMTRPRSIYLVDFSCYRPPSHLQVKFHQFMEHSRLTGDFDESSLEFQRKILERSGLGEETYVPDAMHYLPPRPSMAAAREEAEQVMFGALDNLFANTNVKPKDIGILVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKAKDRRRAKYKLVHVVRTHKGADDNAFKCVYQEQDNAGKTGVSLSKDLMAIAGMALKANITTLGPLVLPISEQLLFFATLVAKKFSNAKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPEHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRRGNRVWQIAFGSGFKCNSAVWQALRNVKPSPNSPWEDCIDKYPVQTVT

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
3-ketoacyl-CoA synthase 4 confidentQ9LN49
3-ketoacyl-CoA synthase 9 probableQ9SIX1
Probable 3-ketoacyl-CoA synthase 2 Active on saturated acyl-CoAs up to C22. Mediates the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C24, C26).probableO65677

Prediction of Enzyme Commission Number ?

EC Number ?Description ?Confidence Level ?
2.-.-.-Transferases.probable
2.3.-.-Acyltransferases.probable
2.3.1.-Transferring groups other than amino-acyl groups.probable
2.3.1.119Icosanoyl-CoA synthase.probable

Spatial Structural Prediction

Structural Models Based on Templates

Template: 2H84, chain A
Confidence level:very confident
Coverage over the Query: 98-355,378-480
View the alignment between query and template
View the model in PyMOL
Template: 3GWA, chain A
Confidence level:very confident
Coverage over the Query: 98-159,174-479
View the alignment between query and template
View the model in PyMOL