Query 010692
Match_columns 503
No_of_seqs 507 out of 1480
Neff 11.3
Searched_HMMs 46136
Date Fri Mar 29 03:28:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010692.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/010692hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 1.6E-40 3.4E-45 300.9 30.8 370 36-468 15-386 (394)
2 COG2271 UhpC Sugar phosphate p 100.0 7.2E-42 1.6E-46 304.3 21.3 376 62-467 53-433 (448)
3 PRK09556 uhpT sugar phosphate 100.0 6.1E-40 1.3E-44 320.5 26.3 377 58-468 49-449 (467)
4 PRK03545 putative arabinose tr 100.0 1.4E-38 3.1E-43 304.4 30.5 346 60-465 31-377 (390)
5 TIGR02332 HpaX 4-hydroxyphenyl 100.0 3.9E-39 8.5E-44 309.0 23.1 395 33-457 7-410 (412)
6 PRK11663 regulatory protein Uh 100.0 2.5E-38 5.4E-43 306.1 28.6 375 59-464 44-420 (434)
7 TIGR00903 2A0129 major facilit 100.0 1.1E-37 2.4E-42 292.5 27.8 349 60-464 13-361 (368)
8 KOG1330 Sugar transporter/spin 100.0 1E-38 2.2E-43 286.9 17.0 377 29-447 28-417 (493)
9 PRK09705 cynX putative cyanate 100.0 1.8E-36 3.8E-41 289.3 30.6 349 55-464 26-377 (393)
10 PRK11551 putative 3-hydroxyphe 100.0 8.1E-37 1.8E-41 294.5 27.1 379 31-463 12-391 (406)
11 TIGR01299 synapt_SV2 synaptic 100.0 5.9E-37 1.3E-41 305.4 24.8 397 58-465 187-731 (742)
12 PLN00028 nitrate transmembrane 100.0 9.4E-37 2E-41 297.5 25.7 362 60-468 58-433 (476)
13 PRK11273 glpT sn-glycerol-3-ph 100.0 2.6E-36 5.5E-41 293.7 28.2 374 62-468 53-435 (452)
14 PRK10406 alpha-ketoglutarate t 100.0 2.6E-36 5.7E-41 292.1 27.4 370 36-465 24-421 (432)
15 TIGR00892 2A0113 monocarboxyla 100.0 2.6E-36 5.6E-41 293.0 26.7 379 57-465 38-418 (455)
16 TIGR00893 2A0114 d-galactonate 100.0 6E-36 1.3E-40 288.3 28.4 374 62-464 18-395 (399)
17 PRK10213 nepI ribonucleoside t 100.0 1.5E-35 3.4E-40 282.5 30.5 336 61-457 43-380 (394)
18 PRK15034 nitrate/nitrite trans 100.0 3.1E-35 6.7E-40 276.7 30.7 347 58-465 54-451 (462)
19 PRK10642 proline/glycine betai 100.0 6.9E-36 1.5E-40 293.3 27.3 378 38-463 20-425 (490)
20 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-35 2.3E-40 284.4 27.5 349 58-460 23-374 (377)
21 PRK14995 methyl viologen resis 100.0 7.9E-36 1.7E-40 293.0 24.4 390 32-442 4-413 (495)
22 PRK03699 putative transporter; 100.0 5.4E-35 1.2E-39 279.7 28.7 352 58-469 27-381 (394)
23 PRK10091 MFS transport protein 100.0 2.7E-34 5.8E-39 273.7 31.0 347 60-466 25-374 (382)
24 PRK15402 multidrug efflux syst 100.0 2E-34 4.2E-39 277.5 30.2 360 30-446 9-374 (406)
25 TIGR00894 2A0114euk Na(+)-depe 100.0 2.6E-35 5.7E-40 288.5 22.9 366 67-465 70-447 (465)
26 TIGR00891 2A0112 putative sial 100.0 4.9E-35 1.1E-39 282.6 24.0 384 33-452 11-400 (405)
27 PRK09952 shikimate transporter 100.0 2.8E-34 6E-39 277.8 28.0 351 65-465 50-430 (438)
28 PRK05122 major facilitator sup 100.0 2.9E-34 6.4E-39 275.9 28.0 358 40-465 21-386 (399)
29 PRK12307 putative sialic acid 100.0 8E-35 1.7E-39 282.4 24.3 339 61-444 41-385 (426)
30 TIGR00900 2A0121 H+ Antiporter 100.0 2.5E-34 5.4E-39 273.7 25.4 335 62-444 23-365 (365)
31 COG2223 NarK Nitrate/nitrite t 100.0 2.6E-34 5.7E-39 256.8 23.7 351 58-466 34-399 (417)
32 TIGR00881 2A0104 phosphoglycer 100.0 1.5E-34 3.3E-39 276.6 23.3 355 62-448 19-377 (379)
33 TIGR00887 2A0109 phosphate:H+ 100.0 1.5E-34 3.3E-39 284.9 23.8 417 34-481 16-500 (502)
34 TIGR00712 glpT glycerol-3-phos 100.0 7E-34 1.5E-38 275.6 27.9 370 62-465 51-430 (438)
35 PRK09874 drug efflux system pr 100.0 1.8E-33 3.8E-38 271.7 30.6 348 62-465 38-395 (408)
36 TIGR00898 2A0119 cation transp 100.0 3.6E-34 7.9E-39 283.8 26.1 377 60-465 111-492 (505)
37 TIGR00879 SP MFS transporter, 100.0 7E-35 1.5E-39 288.2 20.9 391 58-465 48-467 (481)
38 PRK10077 xylE D-xylose transpo 100.0 1.6E-34 3.4E-39 284.8 23.1 411 39-483 17-471 (479)
39 PRK10489 enterobactin exporter 100.0 5.4E-34 1.2E-38 275.3 25.7 344 62-459 41-390 (417)
40 PRK15403 multidrug efflux syst 100.0 4.1E-33 8.8E-38 267.4 30.9 341 62-456 40-385 (413)
41 PRK15075 citrate-proton sympor 100.0 7.9E-34 1.7E-38 275.0 25.8 353 36-445 17-397 (434)
42 PRK10504 putative transporter; 100.0 1E-33 2.3E-38 278.0 26.8 362 62-444 34-417 (471)
43 TIGR00710 efflux_Bcr_CflA drug 100.0 4.1E-33 9E-38 267.2 29.5 327 62-442 29-361 (385)
44 TIGR00899 2A0120 sugar efflux 100.0 4.5E-33 9.7E-38 265.9 29.5 344 64-465 24-371 (375)
45 PRK03893 putative sialic acid 100.0 1.2E-33 2.5E-38 279.8 26.3 370 60-456 42-441 (496)
46 TIGR00897 2A0118 polyol permea 100.0 1.7E-32 3.6E-37 263.1 32.7 350 62-465 37-398 (402)
47 KOG2532 Permease of the major 100.0 5.3E-34 1.1E-38 270.5 21.6 368 65-465 65-444 (466)
48 PRK11646 multidrug resistance 100.0 6.3E-33 1.4E-37 265.1 29.1 340 64-460 37-380 (400)
49 KOG2533 Permease of the major 100.0 1.1E-33 2.3E-38 268.7 23.2 324 62-413 70-401 (495)
50 PRK10133 L-fucose transporter; 100.0 7.8E-33 1.7E-37 266.5 29.2 344 58-456 46-421 (438)
51 PRK12382 putative transporter; 100.0 1.2E-32 2.7E-37 263.8 28.2 337 64-465 42-386 (392)
52 PF07690 MFS_1: Major Facilita 100.0 1.2E-33 2.5E-38 267.6 20.2 326 63-433 22-352 (352)
53 PRK10473 multidrug efflux syst 100.0 5.1E-32 1.1E-36 259.6 31.4 324 61-444 26-351 (392)
54 TIGR00711 efflux_EmrB drug res 100.0 2.1E-33 4.5E-38 277.6 22.1 380 40-443 8-411 (485)
55 PRK03633 putative MFS family t 100.0 3.3E-32 7.1E-37 259.5 27.6 334 62-460 30-364 (381)
56 TIGR00885 fucP L-fucose:H+ sym 100.0 5.7E-32 1.2E-36 258.2 29.0 340 59-456 24-400 (410)
57 PRK11195 lysophospholipid tran 100.0 7.8E-32 1.7E-36 256.9 29.4 354 62-470 27-382 (393)
58 PRK11010 ampG muropeptide tran 100.0 7.1E-32 1.5E-36 263.6 28.3 383 22-466 3-401 (491)
59 TIGR00895 2A0115 benzoate tran 100.0 4.7E-33 1E-37 268.2 19.6 357 61-439 40-397 (398)
60 PRK11102 bicyclomycin/multidru 100.0 1.7E-31 3.7E-36 254.9 29.7 324 62-436 15-343 (377)
61 KOG2504 Monocarboxylate transp 100.0 5.8E-32 1.3E-36 259.9 26.3 407 53-468 61-476 (509)
62 TIGR00805 oat sodium-independe 100.0 2.1E-31 4.5E-36 265.6 29.6 364 56-443 51-582 (633)
63 PRK10054 putative transporter; 100.0 1.1E-31 2.3E-36 256.2 25.3 335 64-456 34-372 (395)
64 PRK11043 putative transporter; 100.0 3.3E-31 7.2E-36 254.8 28.0 330 57-443 26-358 (401)
65 PRK15011 sugar efflux transpor 100.0 9.5E-31 2.1E-35 250.2 30.6 342 64-465 42-388 (393)
66 PRK11652 emrD multidrug resist 100.0 4.1E-31 8.9E-36 253.5 28.2 325 62-442 32-360 (394)
67 TIGR00896 CynX cyanate transpo 100.0 8.9E-31 1.9E-35 247.5 27.9 331 57-447 19-353 (355)
68 KOG0569 Permease of the major 100.0 1.3E-30 2.8E-35 244.0 28.3 388 75-486 62-471 (485)
69 cd06174 MFS The Major Facilita 100.0 1E-30 2.2E-35 247.5 26.5 324 62-464 23-348 (352)
70 TIGR00886 2A0108 nitrite extru 100.0 9.6E-31 2.1E-35 248.9 24.4 326 58-426 21-364 (366)
71 TIGR00902 2A0127 phenyl propri 100.0 3.1E-30 6.7E-35 245.7 27.7 340 62-461 28-372 (382)
72 KOG3764 Vesicular amine transp 100.0 5.5E-31 1.2E-35 231.9 20.2 348 66-468 99-454 (464)
73 TIGR00883 2A0106 metabolite-pr 100.0 2.6E-30 5.7E-35 248.7 26.0 335 70-456 27-389 (394)
74 COG0738 FucP Fucose permease [ 100.0 1.4E-29 3E-34 224.9 28.3 348 37-445 16-387 (422)
75 KOG0254 Predicted transporter 100.0 2.1E-29 4.6E-34 248.3 25.3 393 74-486 90-500 (513)
76 PRK11128 putative 3-phenylprop 100.0 5.4E-29 1.2E-33 237.3 27.0 337 62-458 28-369 (382)
77 PRK06814 acylglycerophosphoeth 100.0 3.2E-29 6.9E-34 271.5 26.9 344 65-456 43-410 (1140)
78 PRK09528 lacY galactoside perm 100.0 2.4E-29 5.2E-34 243.1 23.0 349 65-464 38-399 (420)
79 PF05977 MFS_3: Transmembrane 100.0 2.6E-28 5.7E-33 235.9 28.9 347 66-464 38-390 (524)
80 COG2807 CynX Cyanate permease 100.0 5.3E-28 1.2E-32 211.5 27.3 361 42-464 16-381 (395)
81 PRK08633 2-acyl-glycerophospho 100.0 1.3E-28 2.8E-33 268.0 28.8 331 65-441 37-383 (1146)
82 TIGR00806 rfc RFC reduced fola 100.0 1.1E-28 2.3E-33 227.3 23.2 363 39-426 32-400 (511)
83 PRK11902 ampG muropeptide tran 100.0 8.9E-28 1.9E-32 230.6 29.6 343 62-463 23-385 (402)
84 TIGR00889 2A0110 nucleoside tr 100.0 2.5E-28 5.4E-33 234.3 25.3 350 58-465 23-399 (418)
85 TIGR00882 2A0105 oligosacchari 100.0 4.1E-28 9E-33 232.7 25.0 348 65-463 30-390 (396)
86 TIGR00901 2A0125 AmpG-related 100.0 8.1E-28 1.8E-32 227.5 26.5 311 62-425 12-355 (356)
87 TIGR00792 gph sugar (Glycoside 100.0 2.4E-27 5.2E-32 231.0 27.9 330 64-444 26-382 (437)
88 PF06609 TRI12: Fungal trichot 100.0 1.8E-27 3.9E-32 228.7 25.7 374 57-440 63-465 (599)
89 KOG0252 Inorganic phosphate tr 100.0 1.5E-29 3.1E-34 227.0 10.1 432 29-485 36-513 (538)
90 KOG0253 Synaptic vesicle trans 100.0 4.2E-28 9.2E-33 210.9 18.4 381 59-465 99-516 (528)
91 PRK10207 dipeptide/tripeptide 100.0 2.3E-27 5E-32 230.5 25.2 392 65-465 42-473 (489)
92 KOG0255 Synaptic vesicle trans 100.0 2.7E-27 5.8E-32 235.0 25.4 392 20-440 71-466 (521)
93 KOG2615 Permease of the major 100.0 2.2E-27 4.7E-32 208.0 19.2 357 70-456 65-428 (451)
94 PF00083 Sugar_tr: Sugar (and 100.0 1.1E-32 2.4E-37 269.4 -17.4 383 73-483 46-450 (451)
95 TIGR00924 yjdL_sub1_fam amino 100.0 3.4E-26 7.5E-31 222.4 26.2 390 65-462 38-462 (475)
96 PTZ00207 hypothetical protein; 99.9 2.3E-26 5.1E-31 222.8 22.3 401 59-466 48-550 (591)
97 TIGR02718 sider_RhtX_FptX side 99.9 6E-25 1.3E-29 210.3 27.7 359 42-461 9-384 (390)
98 PRK09584 tppB putative tripept 99.9 1.1E-24 2.3E-29 213.2 28.7 143 65-207 49-195 (500)
99 KOG3626 Organic anion transpor 99.9 1.6E-23 3.6E-28 202.4 27.6 376 40-443 103-650 (735)
100 PF11700 ATG22: Vacuole efflux 99.9 4E-22 8.8E-27 191.1 31.4 350 73-465 70-465 (477)
101 PRK09669 putative symporter Ya 99.9 6.8E-23 1.5E-27 199.3 25.9 326 65-444 37-390 (444)
102 KOG4686 Predicted sugar transp 99.9 1.4E-24 3E-29 182.4 9.9 366 30-449 40-421 (459)
103 PRK10429 melibiose:sodium symp 99.9 4E-22 8.8E-27 194.9 28.4 331 65-444 34-395 (473)
104 TIGR00788 fbt folate/biopterin 99.9 6.3E-23 1.4E-27 199.1 22.4 372 62-472 50-447 (468)
105 PF03825 Nuc_H_symport: Nucleo 99.9 4.9E-22 1.1E-26 187.0 26.3 330 62-444 26-366 (400)
106 PF03137 OATP: Organic Anion T 99.9 6.2E-26 1.3E-30 220.3 -0.4 374 52-444 17-516 (539)
107 TIGR01301 GPH_sucrose GPH fami 99.9 6.9E-22 1.5E-26 188.1 26.1 366 62-465 28-468 (477)
108 TIGR01272 gluP glucose/galacto 99.9 1.7E-21 3.6E-26 178.6 25.1 276 121-453 5-300 (310)
109 PRK09848 glucuronide transport 99.9 7.6E-21 1.6E-25 185.3 27.7 325 65-444 36-390 (448)
110 PF01306 LacY_symp: LacY proto 99.9 1.1E-21 2.5E-26 180.5 19.9 361 52-465 25-397 (412)
111 PRK15462 dipeptide/tripeptide 99.9 1.5E-20 3.3E-25 179.7 27.3 147 65-212 37-187 (493)
112 PF13347 MFS_2: MFS/sugar tran 99.9 4.2E-21 9E-26 185.8 22.5 328 65-444 29-386 (428)
113 PRK11462 putative transporter; 99.9 7.2E-20 1.6E-24 177.7 28.4 325 65-444 37-389 (460)
114 COG2270 Permeases of the major 99.9 2E-20 4.3E-25 168.2 22.2 347 72-465 57-426 (438)
115 KOG2563 Permease of the major 99.9 1.1E-20 2.4E-25 170.6 18.7 365 28-444 39-423 (480)
116 COG2211 MelB Na+/melibiose sym 99.8 1.6E-17 3.4E-22 154.8 28.9 330 65-444 40-398 (467)
117 COG3104 PTR2 Dipeptide/tripept 99.8 1.6E-17 3.4E-22 153.1 22.6 391 65-464 53-483 (498)
118 PF03209 PUCC: PUCC protein; 99.8 2.3E-15 5.1E-20 136.3 32.1 328 65-443 7-364 (403)
119 KOG2325 Predicted transporter/ 99.8 1.4E-17 3.1E-22 155.3 17.7 387 32-465 32-472 (488)
120 KOG2816 Predicted transporter 99.7 3.3E-15 7.1E-20 141.9 26.7 318 83-444 72-394 (463)
121 TIGR00880 2_A_01_02 Multidrug 99.7 1.7E-16 3.6E-21 128.6 11.9 139 77-215 2-140 (141)
122 PF03092 BT1: BT1 family; Int 99.7 6.7E-15 1.4E-19 141.1 20.0 344 62-444 14-382 (433)
123 TIGR00889 2A0110 nucleoside tr 99.6 1.5E-15 3.3E-20 146.0 13.7 145 72-216 250-405 (418)
124 PF01770 Folate_carrier: Reduc 99.6 5.2E-13 1.1E-17 122.8 27.8 369 38-425 9-386 (412)
125 PRK09528 lacY galactoside perm 99.6 3.7E-15 8E-20 144.2 11.5 148 66-213 255-403 (420)
126 PF05631 DUF791: Protein of un 99.6 3E-13 6.4E-18 120.8 20.4 238 62-347 58-304 (354)
127 PRK10642 proline/glycine betai 99.6 1.9E-14 4.2E-19 141.7 12.5 154 65-219 278-435 (490)
128 PRK15011 sugar efflux transpor 99.5 5.8E-14 1.3E-18 134.5 13.2 147 65-212 244-390 (393)
129 TIGR00890 2A0111 Oxalate/Forma 99.5 3.6E-14 7.9E-19 135.6 11.0 144 62-205 229-374 (377)
130 TIGR01299 synapt_SV2 synaptic 99.5 1E-13 2.3E-18 139.5 13.9 140 76-217 598-737 (742)
131 PRK05122 major facilitator sup 99.5 1.5E-13 3.2E-18 132.3 14.2 146 66-213 244-389 (399)
132 PRK10489 enterobactin exporter 99.5 1.2E-13 2.5E-18 133.7 12.6 154 62-215 247-401 (417)
133 PRK09874 drug efflux system pr 99.5 8.4E-14 1.8E-18 134.6 10.9 139 75-213 260-398 (408)
134 TIGR00899 2A0120 sugar efflux 99.5 2.4E-13 5.2E-18 129.8 13.7 145 65-210 227-371 (375)
135 PRK03893 putative sialic acid 99.5 1.4E-13 3.1E-18 136.5 12.1 146 62-207 299-447 (496)
136 TIGR00902 2A0127 phenyl propri 99.5 2.8E-13 6.1E-18 129.3 13.2 145 62-208 229-374 (382)
137 PRK11551 putative 3-hydroxyphe 99.5 2.3E-13 5E-18 131.3 11.2 151 62-212 244-395 (406)
138 PRK12382 putative transporter; 99.5 5.5E-13 1.2E-17 128.0 13.4 145 66-212 244-388 (392)
139 cd06174 MFS The Major Facilita 99.5 3.3E-13 7.2E-18 127.6 10.9 150 62-211 199-350 (352)
140 PRK03545 putative arabinose tr 99.5 1E-12 2.2E-17 126.0 13.9 147 65-213 233-380 (390)
141 PF05977 MFS_3: Transmembrane 99.4 8.2E-13 1.8E-17 128.6 12.6 147 65-211 246-392 (524)
142 TIGR00892 2A0113 monocarboxyla 99.4 1.9E-13 4.2E-18 133.1 7.7 146 62-207 265-415 (455)
143 KOG3762 Predicted transporter 99.4 4.6E-12 9.9E-17 117.6 15.0 188 274-467 359-546 (618)
144 PRK03633 putative MFS family t 99.4 2.1E-12 4.6E-17 123.3 13.3 146 62-210 224-369 (381)
145 PRK09556 uhpT sugar phosphate 99.4 7.2E-13 1.6E-17 130.0 10.1 148 65-212 286-448 (467)
146 TIGR00883 2A0106 metabolite-pr 99.4 4.7E-13 1E-17 128.7 8.5 139 65-203 247-391 (394)
147 COG2271 UhpC Sugar phosphate p 99.4 5.5E-12 1.2E-16 114.1 14.3 173 285-465 28-203 (448)
148 PRK03699 putative transporter; 99.4 1.2E-12 2.7E-17 125.5 10.7 147 65-212 233-379 (394)
149 PRK09705 cynX putative cyanate 99.4 1.9E-12 4.1E-17 124.0 11.7 154 62-217 229-385 (393)
150 PRK10054 putative transporter; 99.4 8.5E-12 1.8E-16 119.4 15.5 169 286-462 7-176 (395)
151 TIGR00879 SP MFS transporter, 99.4 3.8E-12 8.2E-17 125.9 13.3 156 61-216 307-473 (481)
152 TIGR00897 2A0118 polyol permea 99.4 5.8E-12 1.2E-16 121.1 13.7 149 62-212 246-400 (402)
153 TIGR00893 2A0114 d-galactonate 99.4 3.2E-12 7E-17 123.0 11.6 146 65-211 243-397 (399)
154 PRK11663 regulatory protein Uh 99.4 3.1E-11 6.6E-16 117.3 17.9 167 286-460 23-190 (434)
155 PRK11128 putative 3-phenylprop 99.4 9.4E-12 2E-16 118.9 13.6 141 64-206 231-372 (382)
156 TIGR00882 2A0105 oligosacchari 99.4 5.3E-12 1.2E-16 121.3 11.9 143 69-211 250-393 (396)
157 TIGR00924 yjdL_sub1_fam amino 99.3 2E-11 4.3E-16 119.3 14.4 171 286-463 10-187 (475)
158 TIGR00900 2A0121 H+ Antiporter 99.3 9.1E-12 2E-16 118.4 11.8 163 292-462 5-173 (365)
159 PRK15462 dipeptide/tripeptide 99.3 4.5E-11 9.8E-16 115.0 16.0 174 285-465 8-186 (493)
160 TIGR00891 2A0112 putative sial 99.3 5.7E-12 1.2E-16 121.7 9.9 134 65-198 266-401 (405)
161 COG2814 AraJ Arabinose efflux 99.3 2.3E-11 5E-16 111.5 13.1 150 62-213 236-386 (394)
162 TIGR00712 glpT glycerol-3-phos 99.3 7.5E-11 1.6E-15 114.8 16.7 173 284-464 25-202 (438)
163 PRK10077 xylE D-xylose transpo 99.3 2.2E-11 4.9E-16 120.3 12.1 155 62-216 295-460 (479)
164 PRK11646 multidrug resistance 99.3 8.4E-11 1.8E-15 112.8 14.6 164 291-462 15-179 (400)
165 PF02487 CLN3: CLN3 protein; 99.3 4.5E-09 9.7E-14 97.1 24.9 321 74-433 60-388 (402)
166 PF07690 MFS_1: Major Facilita 99.3 2.6E-11 5.7E-16 114.6 10.7 162 295-463 5-167 (352)
167 PRK11273 glpT sn-glycerol-3-ph 99.3 1.6E-11 3.5E-16 119.9 9.3 149 65-213 281-435 (452)
168 PRK09584 tppB putative tripept 99.3 1.9E-10 4.2E-15 113.1 16.5 176 282-464 16-197 (500)
169 PRK09952 shikimate transporter 99.2 5.2E-11 1.1E-15 115.7 11.7 148 65-212 278-432 (438)
170 PLN00028 nitrate transmembrane 99.2 3.7E-11 7.9E-16 117.9 10.6 147 65-213 280-433 (476)
171 PRK10207 dipeptide/tripeptide 99.2 1.6E-10 3.5E-15 113.0 15.0 172 285-463 13-189 (489)
172 TIGR00710 efflux_Bcr_CflA drug 99.2 2.1E-10 4.5E-15 110.0 14.9 156 300-463 19-175 (385)
173 PRK10504 putative transporter; 99.2 2.1E-10 4.6E-15 113.0 15.2 170 286-463 10-180 (471)
174 PF06813 Nodulin-like: Nodulin 99.2 6E-10 1.3E-14 96.7 16.1 160 52-213 16-182 (250)
175 PRK11010 ampG muropeptide tran 99.2 7.7E-11 1.7E-15 115.8 11.9 148 65-212 250-402 (491)
176 TIGR02718 sider_RhtX_FptX side 99.2 5.7E-11 1.2E-15 113.9 10.7 146 63-208 233-386 (390)
177 KOG3098 Uncharacterized conser 99.2 1.1E-08 2.4E-13 96.2 25.4 312 74-431 50-403 (461)
178 PF11700 ATG22: Vacuole efflux 99.2 8.6E-11 1.9E-15 113.4 11.3 148 65-212 309-467 (477)
179 TIGR02332 HpaX 4-hydroxyphenyl 99.2 1.9E-10 4.1E-15 110.8 13.8 162 292-460 14-181 (412)
180 KOG4332 Predicted sugar transp 99.2 1.7E-09 3.6E-14 91.5 17.3 316 58-426 57-391 (454)
181 TIGR00881 2A0104 phosphoglycer 99.2 6.3E-11 1.4E-15 113.3 9.7 159 296-462 5-165 (379)
182 PRK15075 citrate-proton sympor 99.2 6.9E-11 1.5E-15 114.9 9.9 128 65-192 266-398 (434)
183 TIGR00886 2A0108 nitrite extru 99.2 4.6E-10 1E-14 106.8 15.3 148 287-441 2-151 (366)
184 PRK10213 nepI ribonucleoside t 99.2 6.5E-10 1.4E-14 106.4 16.0 147 304-458 38-185 (394)
185 PRK11195 lysophospholipid tran 99.2 4E-10 8.7E-15 107.8 14.5 158 286-455 3-161 (393)
186 PRK15402 multidrug efflux syst 99.2 2.8E-10 6E-15 109.8 13.5 147 65-212 243-394 (406)
187 PRK10091 MFS transport protein 99.2 5.9E-10 1.3E-14 106.5 15.4 168 286-461 3-171 (382)
188 TIGR00792 gph sugar (Glycoside 99.2 2.2E-10 4.7E-15 111.9 12.8 121 71-191 255-383 (437)
189 PRK10473 multidrug efflux syst 99.2 5.1E-10 1.1E-14 107.5 14.7 161 295-463 12-173 (392)
190 TIGR00895 2A0115 benzoate tran 99.2 9.8E-11 2.1E-15 112.8 9.5 153 299-459 30-183 (398)
191 PRK11043 putative transporter; 99.2 9.5E-10 2.1E-14 106.0 15.7 156 301-463 18-176 (401)
192 TIGR00887 2A0109 phosphate:H+ 99.2 4.4E-10 9.5E-15 111.4 13.4 155 62-217 312-492 (502)
193 PRK11902 ampG muropeptide tran 99.1 1.7E-10 3.6E-15 111.1 10.1 144 65-212 237-389 (402)
194 KOG0637 Sucrose transporter an 99.1 2.9E-10 6.3E-15 103.9 10.8 126 61-186 55-203 (498)
195 PRK12307 putative sialic acid 99.1 7.8E-10 1.7E-14 107.6 14.5 158 289-454 21-179 (426)
196 PRK14995 methyl viologen resis 99.1 8.3E-10 1.8E-14 109.1 14.8 166 289-462 9-176 (495)
197 PF06963 FPN1: Ferroportin1 (F 99.1 5.5E-08 1.2E-12 91.8 25.9 330 76-426 41-403 (432)
198 PF01306 LacY_symp: LacY proto 99.1 1.8E-10 3.9E-15 106.9 9.2 147 69-215 255-402 (412)
199 TIGR00711 efflux_EmrB drug res 99.1 4.5E-10 9.7E-15 111.3 12.5 164 291-462 7-171 (485)
200 TIGR00769 AAA ADP/ATP carrier 99.1 2.3E-07 5.1E-12 88.6 30.0 252 62-351 27-333 (472)
201 PRK15034 nitrate/nitrite trans 99.1 1.9E-09 4E-14 102.8 15.5 147 285-438 33-185 (462)
202 PF03825 Nuc_H_symport: Nucleo 99.1 1.1E-09 2.4E-14 103.7 13.5 151 65-215 234-397 (400)
203 COG2270 Permeases of the major 99.1 2.4E-10 5.1E-15 103.9 8.3 143 65-207 280-423 (438)
204 TIGR01272 gluP glucose/galacto 99.1 4.5E-10 9.8E-15 103.2 10.1 131 67-200 172-302 (310)
205 PRK08633 2-acyl-glycerophospho 99.1 3.7E-10 8.1E-15 123.9 11.2 145 65-209 260-406 (1146)
206 TIGR00903 2A0129 major facilit 99.1 1.5E-09 3.1E-14 102.5 13.5 151 304-463 9-160 (368)
207 PRK10406 alpha-ketoglutarate t 99.1 6.9E-10 1.5E-14 107.8 11.3 146 65-211 271-422 (432)
208 PRK11102 bicyclomycin/multidru 99.1 1.3E-09 2.9E-14 104.1 13.0 151 305-463 10-161 (377)
209 PRK11652 emrD multidrug resist 99.1 3.3E-09 7.2E-14 101.9 15.7 151 302-460 24-175 (394)
210 COG2223 NarK Nitrate/nitrite t 99.1 4.5E-10 9.7E-15 102.1 8.8 144 65-213 246-401 (417)
211 TIGR00898 2A0119 cation transp 99.1 1.9E-09 4.1E-14 107.3 13.3 138 77-217 359-498 (505)
212 KOG2615 Permease of the major 99.1 1.3E-09 2.9E-14 97.1 10.7 143 323-472 70-215 (451)
213 PRK06814 acylglycerophosphoeth 99.0 7.5E-10 1.6E-14 121.1 10.8 146 65-210 253-419 (1140)
214 KOG3810 Micronutrient transpor 99.0 5.6E-09 1.2E-13 91.8 13.6 356 38-425 10-372 (433)
215 TIGR00926 2A1704 Peptide:H+ sy 99.0 3.3E-08 7.2E-13 98.9 20.8 149 65-213 15-182 (654)
216 TIGR00894 2A0114euk Na(+)-depe 99.0 1.9E-09 4.1E-14 106.0 11.9 147 65-212 289-449 (465)
217 PRK15403 multidrug efflux syst 99.0 7.5E-09 1.6E-13 99.7 15.6 142 314-462 43-185 (413)
218 TIGR00806 rfc RFC reduced fola 99.0 1.1E-08 2.4E-13 95.9 15.7 130 309-447 48-179 (511)
219 KOG4686 Predicted sugar transp 99.0 2.5E-09 5.5E-14 91.3 10.1 172 33-213 266-442 (459)
220 PRK09848 glucuronide transport 99.0 3E-09 6.4E-14 104.0 12.3 124 65-188 256-388 (448)
221 KOG1330 Sugar transporter/spin 99.0 2.8E-10 6E-15 104.3 4.6 154 314-473 60-214 (493)
222 TIGR00896 CynX cyanate transpo 99.0 1.7E-09 3.7E-14 102.3 9.8 128 62-190 221-350 (355)
223 KOG0569 Permease of the major 99.0 1E-08 2.2E-13 97.5 14.7 156 62-218 294-459 (485)
224 TIGR00885 fucP L-fucose:H+ sym 99.0 1.1E-08 2.3E-13 98.4 15.2 146 288-440 5-154 (410)
225 KOG2504 Monocarboxylate transp 99.0 1.3E-09 2.7E-14 106.0 8.1 154 60-213 320-476 (509)
226 TIGR00880 2_A_01_02 Multidrug 99.0 6.2E-09 1.3E-13 83.8 10.6 128 329-463 6-133 (141)
227 PF13347 MFS_2: MFS/sugar tran 98.9 1.9E-08 4.1E-13 97.7 14.2 121 66-187 254-383 (428)
228 KOG3762 Predicted transporter 98.9 7.3E-09 1.6E-13 96.7 10.1 149 65-213 398-547 (618)
229 PRK10429 melibiose:sodium symp 98.9 2.5E-08 5.5E-13 98.0 13.8 118 71-188 264-393 (473)
230 PRK10133 L-fucose transporter; 98.9 1.9E-08 4.1E-13 97.5 12.6 139 65-206 287-426 (438)
231 KOG3764 Vesicular amine transp 98.9 5.5E-09 1.2E-13 93.9 7.7 149 65-213 298-454 (464)
232 PF06609 TRI12: Fungal trichot 98.9 3.6E-08 7.7E-13 96.3 13.9 176 284-468 38-217 (599)
233 COG0477 ProP Permeases of the 98.9 2.6E-08 5.6E-13 92.5 12.1 144 62-205 26-177 (338)
234 TIGR00901 2A0125 AmpG-related 98.9 5.4E-09 1.2E-13 99.0 7.5 111 62-172 233-355 (356)
235 TIGR00788 fbt folate/biopterin 98.8 2.3E-08 5.1E-13 97.6 11.6 126 65-190 280-415 (468)
236 COG2807 CynX Cyanate permease 98.8 6E-08 1.3E-12 86.6 11.2 154 59-213 229-385 (395)
237 TIGR01301 GPH_sucrose GPH fami 98.8 1.5E-07 3.2E-12 90.6 14.8 165 295-465 13-215 (477)
238 PTZ00207 hypothetical protein; 98.8 1.6E-07 3.4E-12 92.4 15.2 152 302-465 43-202 (591)
239 PRK09669 putative symporter Ya 98.7 6.8E-08 1.5E-12 94.3 11.5 119 73-191 264-391 (444)
240 COG3104 PTR2 Dipeptide/tripept 98.7 5.1E-08 1.1E-12 91.1 9.2 177 285-468 20-206 (498)
241 TIGR00805 oat sodium-independe 98.7 6E-08 1.3E-12 97.9 10.5 125 312-442 58-234 (633)
242 KOG0253 Synaptic vesicle trans 98.7 4.2E-08 9.2E-13 87.3 8.0 127 81-213 389-519 (528)
243 KOG3574 Acetyl-CoA transporter 98.7 5.4E-06 1.2E-10 74.4 20.5 352 36-443 33-432 (510)
244 PF13000 Acatn: Acetyl-coenzym 98.7 3.8E-05 8.2E-10 72.1 25.7 383 38-443 4-468 (544)
245 PF03209 PUCC: PUCC protein; 98.6 2.2E-06 4.7E-11 78.7 16.3 149 62-210 232-395 (403)
246 KOG2532 Permease of the major 98.6 3.4E-07 7.4E-12 88.1 11.4 146 316-467 67-215 (466)
247 KOG1237 H+/oligopeptide sympor 98.6 6.8E-06 1.5E-10 81.0 19.9 154 59-212 59-244 (571)
248 COG2211 MelB Na+/melibiose sym 98.6 1.1E-06 2.3E-11 83.0 13.8 123 65-187 264-395 (467)
249 KOG0255 Synaptic vesicle trans 98.6 2.7E-07 5.8E-12 92.2 9.5 130 325-464 122-251 (521)
250 KOG2533 Permease of the major 98.5 4.3E-07 9.3E-12 87.7 10.3 135 325-465 85-224 (495)
251 COG0738 FucP Fucose permease [ 98.5 2.5E-06 5.4E-11 77.6 14.3 128 308-441 34-165 (422)
252 PF05978 UNC-93: Ion channel r 98.5 9.5E-07 2.1E-11 70.8 10.4 108 77-185 41-148 (156)
253 PRK11462 putative transporter; 98.5 2.1E-06 4.6E-11 83.9 13.7 151 293-444 16-174 (460)
254 PF06779 DUF1228: Protein of u 98.4 2.6E-07 5.7E-12 64.5 3.3 73 58-130 12-84 (85)
255 PF03219 TLC: TLC ATP/ADP tran 98.4 0.0003 6.6E-09 68.0 24.8 244 72-351 57-349 (491)
256 PF00854 PTR2: POT family; In 98.2 2E-05 4.2E-10 75.0 13.4 109 104-212 2-122 (372)
257 COG3202 ATP/ADP translocase [E 98.2 0.0019 4.1E-08 60.9 25.6 126 62-187 47-209 (509)
258 TIGR00939 2a57 Equilibrative N 98.2 0.00033 7.1E-09 67.3 21.5 56 377-433 370-425 (437)
259 KOG0254 Predicted transporter 98.2 5.7E-06 1.2E-10 82.2 9.7 133 324-463 92-225 (513)
260 PF00083 Sugar_tr: Sugar (and 98.2 7.7E-08 1.7E-12 94.3 -4.6 128 325-459 50-183 (451)
261 KOG0252 Inorganic phosphate tr 98.0 2.9E-06 6.4E-11 78.3 2.9 129 88-217 363-501 (538)
262 PF06813 Nodulin-like: Nodulin 98.0 9.9E-05 2.2E-09 64.5 11.9 133 299-440 15-155 (250)
263 PF12832 MFS_1_like: MFS_1 lik 98.0 1.4E-05 3E-10 55.6 5.1 52 62-113 24-75 (77)
264 KOG3880 Predicted small molecu 97.9 0.00027 5.8E-09 61.9 12.5 136 75-215 64-201 (409)
265 KOG2816 Predicted transporter 97.9 0.00055 1.2E-08 66.0 15.1 122 64-186 268-390 (463)
266 KOG2325 Predicted transporter/ 97.8 0.00055 1.2E-08 65.3 13.0 135 325-465 75-226 (488)
267 TIGR00926 2A1704 Peptide:H+ sy 97.7 0.00036 7.7E-09 70.5 12.2 159 302-466 3-180 (654)
268 PF07672 MFS_Mycoplasma: Mycop 97.7 0.0026 5.5E-08 55.0 14.7 55 158-212 2-61 (267)
269 KOG1479 Nucleoside transporter 97.5 0.0071 1.5E-07 56.2 15.7 110 306-421 263-385 (406)
270 PF05631 DUF791: Protein of un 97.4 0.0058 1.3E-07 55.7 14.5 144 315-464 62-212 (354)
271 KOG2563 Permease of the major 97.2 0.0034 7.3E-08 58.6 10.7 123 312-440 70-200 (480)
272 PF01770 Folate_carrier: Reduc 97.1 0.029 6.3E-07 52.8 15.9 157 302-465 19-179 (412)
273 PF03092 BT1: BT1 family; Int 97.1 0.002 4.3E-08 62.4 8.2 143 70-212 252-412 (433)
274 PF02487 CLN3: CLN3 protein; 96.9 0.0054 1.2E-07 57.5 9.3 111 71-185 279-394 (402)
275 PF12832 MFS_1_like: MFS_1 lik 96.9 0.0037 8.1E-08 43.5 5.8 59 293-352 7-66 (77)
276 PRK03612 spermidine synthase; 96.8 0.019 4.2E-07 56.8 12.5 140 65-206 42-190 (521)
277 PF05978 UNC-93: Ion channel r 96.8 0.016 3.4E-07 46.7 9.7 100 328-434 44-143 (156)
278 TIGR00769 AAA ADP/ATP carrier 96.5 0.17 3.7E-06 49.1 16.0 56 384-440 133-189 (472)
279 KOG2601 Iron transporter [Inor 96.4 0.12 2.7E-06 47.2 13.4 123 82-204 72-217 (503)
280 KOG0637 Sucrose transporter an 96.4 0.045 9.8E-07 51.5 11.0 140 296-437 42-200 (498)
281 PF01733 Nucleoside_tran: Nucl 96.2 0.0012 2.7E-08 60.7 0.2 55 378-433 247-301 (309)
282 PF06963 FPN1: Ferroportin1 (F 96.2 0.39 8.4E-06 46.1 16.8 64 289-352 5-69 (432)
283 PF03137 OATP: Organic Anion T 96.1 0.00092 2E-08 66.2 -1.6 122 312-439 28-200 (539)
284 COG0477 ProP Permeases of the 95.9 0.19 4.1E-06 45.9 13.4 113 325-442 43-158 (338)
285 KOG3098 Uncharacterized conser 95.9 0.13 2.7E-06 49.5 11.9 103 82-185 288-411 (461)
286 PRK03612 spermidine synthase; 95.6 0.45 9.8E-06 47.2 15.0 57 387-445 118-175 (521)
287 PF03219 TLC: TLC ATP/ADP tran 95.6 0.92 2E-05 44.5 16.5 56 385-441 149-205 (491)
288 PF06779 DUF1228: Protein of u 94.5 0.13 2.9E-06 36.2 5.5 76 301-382 7-83 (85)
289 PF00854 PTR2: POT family; In 93.8 0.27 5.9E-06 46.8 8.1 84 380-465 34-120 (372)
290 TIGR00939 2a57 Equilibrative N 93.6 0.82 1.8E-05 44.3 11.0 107 77-184 311-430 (437)
291 KOG3626 Organic anion transpor 93.4 0.49 1.1E-05 48.0 9.3 70 395-465 253-340 (735)
292 KOG3097 Predicted membrane pro 92.8 3.9 8.6E-05 37.2 12.8 74 81-155 66-139 (390)
293 KOG4332 Predicted sugar transp 92.5 2.3 5E-05 37.4 10.7 136 75-210 284-428 (454)
294 KOG1479 Nucleoside transporter 92.4 1.3 2.7E-05 41.8 9.9 35 380-415 118-152 (406)
295 PF13000 Acatn: Acetyl-coenzym 91.6 1.5 3.3E-05 42.3 9.4 37 400-437 139-175 (544)
296 KOG3574 Acetyl-CoA transporter 89.4 3.1 6.8E-05 38.7 9.0 63 286-352 31-99 (510)
297 PF06912 DUF1275: Protein of u 87.0 18 0.0004 30.9 12.7 119 79-197 52-197 (209)
298 KOG3880 Predicted small molecu 85.7 2.8 6.1E-05 37.7 6.4 117 65-185 279-401 (409)
299 PF03547 Mem_trans: Membrane t 82.8 45 0.00098 31.8 20.1 23 276-298 235-257 (385)
300 COG5336 Uncharacterized protei 82.5 6.8 0.00015 28.7 6.1 41 76-116 45-86 (116)
301 KOG4830 Predicted sugar transp 80.6 0.29 6.4E-06 42.3 -1.4 43 279-321 194-236 (412)
302 KOG3810 Micronutrient transpor 80.5 8.5 0.00018 35.5 7.4 131 76-209 274-417 (433)
303 KOG1237 H+/oligopeptide sympor 80.2 11 0.00024 38.0 9.1 165 296-466 47-243 (571)
304 PF01733 Nucleoside_tran: Nucl 77.2 0.76 1.7E-05 42.3 0.0 107 78-184 187-306 (309)
305 PF03547 Mem_trans: Membrane t 73.9 24 0.00052 33.7 9.4 14 336-349 10-23 (385)
306 COG5336 Uncharacterized protei 71.4 14 0.0003 27.1 5.1 34 411-445 38-71 (116)
307 PF07672 MFS_Mycoplasma: Mycop 71.3 57 0.0012 29.0 9.8 99 77-176 145-253 (267)
308 COG4769 Predicted membrane pro 70.9 11 0.00023 30.2 4.8 54 81-140 81-134 (181)
309 COG4262 Predicted spermidine s 69.9 96 0.0021 28.9 13.3 143 69-213 39-191 (508)
310 PF06679 DUF1180: Protein of u 69.1 11 0.00024 30.4 4.8 11 448-458 96-106 (163)
311 KOG2881 Predicted membrane pro 63.3 29 0.00063 30.3 6.3 18 189-206 127-144 (294)
312 PF02990 EMP70: Endomembrane p 60.9 41 0.00089 33.7 8.1 24 328-351 304-327 (521)
313 PRK13629 threonine/serine tran 60.1 1.7E+02 0.0038 28.4 12.5 45 156-205 18-62 (443)
314 PF02694 UPF0060: Uncharacteri 58.2 27 0.00059 25.7 4.6 51 73-123 54-104 (107)
315 PF07857 DUF1632: CEO family ( 57.4 84 0.0018 27.9 8.4 20 298-317 190-209 (254)
316 PF11947 DUF3464: Protein of u 57.2 24 0.00053 28.2 4.6 32 395-426 110-141 (153)
317 PF07857 DUF1632: CEO family ( 55.2 68 0.0015 28.4 7.5 9 435-443 94-102 (254)
318 PF11947 DUF3464: Protein of u 54.6 38 0.00083 27.1 5.3 51 124-177 95-145 (153)
319 PF02632 BioY: BioY family; I 52.5 79 0.0017 25.3 6.9 41 79-119 59-99 (148)
320 COG2962 RarD Predicted permeas 52.4 1.8E+02 0.0039 26.3 9.6 68 277-351 60-127 (293)
321 PRK02237 hypothetical protein; 52.4 46 0.001 24.6 5.0 50 73-122 56-105 (109)
322 PF00558 Vpu: Vpu protein; In 51.0 28 0.00062 24.2 3.6 9 457-465 16-24 (81)
323 COG1268 BioY Uncharacterized c 50.8 76 0.0016 26.5 6.7 24 79-102 88-111 (184)
324 PRK10263 DNA translocase FtsK; 50.5 3.1E+02 0.0068 30.9 12.6 17 428-444 143-159 (1355)
325 PF07760 DUF1616: Protein of u 50.4 1.9E+02 0.0041 26.4 9.9 57 129-186 22-78 (287)
326 COG3202 ATP/ADP translocase [E 48.9 2.8E+02 0.006 27.4 22.1 73 389-462 294-367 (509)
327 KOG2601 Iron transporter [Inor 48.7 1.4E+02 0.0031 28.3 8.6 17 428-444 187-203 (503)
328 PF12805 FUSC-like: FUSC-like 47.7 1.4E+02 0.0031 27.0 8.8 39 106-144 2-41 (284)
329 COG1230 CzcD Co/Zn/Cd efflux s 46.6 29 0.00064 31.4 4.0 35 160-194 153-187 (296)
330 PF03606 DcuC: C4-dicarboxylat 45.5 3.1E+02 0.0068 27.1 13.5 9 343-351 106-114 (465)
331 TIGR00844 c_cpa1 na(+)/h(+) an 44.4 4.2E+02 0.0091 28.2 19.0 39 164-202 103-141 (810)
332 COG4177 LivM ABC-type branched 44.1 2.6E+02 0.0057 25.8 9.8 60 126-186 208-267 (314)
333 PF00909 Ammonium_transp: Ammo 42.5 3.2E+02 0.007 26.3 12.6 33 159-191 108-140 (399)
334 PF07456 Hpre_diP_synt_I: Hept 41.5 1.2E+02 0.0027 24.2 6.4 52 79-136 67-118 (148)
335 KOG4112 Signal peptidase subun 40.9 63 0.0014 23.1 4.0 16 428-444 35-50 (101)
336 PF05255 UPF0220: Uncharacteri 40.4 1.9E+02 0.004 23.8 7.4 60 153-212 13-78 (166)
337 PF11299 DUF3100: Protein of u 39.9 36 0.00079 29.3 3.3 54 131-185 176-229 (241)
338 TIGR01666 YCCS hypothetical me 37.1 2.3E+02 0.0049 29.8 9.1 53 92-144 42-99 (704)
339 PRK10263 DNA translocase FtsK; 37.0 1.6E+02 0.0034 33.0 8.1 23 173-195 142-164 (1355)
340 COG3619 Predicted membrane pro 35.5 3E+02 0.0065 24.0 14.9 119 72-190 54-196 (226)
341 KOG1277 Endosomal membrane pro 35.1 4.3E+02 0.0094 25.7 11.1 38 332-370 338-375 (593)
342 PF09527 ATPase_gene1: Putativ 35.0 1.2E+02 0.0026 19.2 5.9 36 80-115 7-43 (55)
343 PF10183 ESSS: ESSS subunit of 34.8 56 0.0012 24.3 3.3 30 187-216 55-84 (105)
344 PF13268 DUF4059: Protein of u 34.5 1.2E+02 0.0026 20.5 4.3 30 450-479 13-42 (72)
345 PF10785 NADH-u_ox-rdase: NADH 32.3 1.9E+02 0.0041 20.6 5.8 44 83-126 28-78 (86)
346 PF13386 DsbD_2: Cytochrome C 31.5 3.2E+02 0.007 23.1 11.6 30 323-352 152-181 (199)
347 PF11151 DUF2929: Protein of u 30.7 1.5E+02 0.0033 19.1 6.0 43 170-212 10-52 (57)
348 TIGR01667 YCCS_YHJK integral m 30.4 4.9E+02 0.011 27.4 10.3 54 91-144 41-99 (701)
349 PLN02332 membrane bound O-acyl 28.7 5.9E+02 0.013 25.2 11.0 31 101-131 339-369 (465)
350 PF11833 DUF3353: Protein of u 28.6 2.5E+02 0.0054 23.8 6.6 31 157-187 136-166 (194)
351 PF04226 Transgly_assoc: Trans 28.6 1.5E+02 0.0032 18.3 4.9 38 173-210 6-43 (48)
352 PF15048 OSTbeta: Organic solu 27.5 1.3E+02 0.0028 23.0 4.1 11 446-456 35-45 (125)
353 PF01864 DUF46: Putative integ 27.2 1.8E+02 0.0038 24.2 5.3 30 325-354 89-118 (175)
354 COG2836 Uncharacterized conser 26.8 4.2E+02 0.0092 23.0 12.0 28 323-350 166-193 (232)
355 PF11511 RhodobacterPufX: Intr 26.6 2E+02 0.0044 19.2 4.9 30 190-219 29-58 (67)
356 PRK03818 putative transporter; 26.3 4.9E+02 0.011 26.5 9.3 83 74-157 436-520 (552)
357 KOG3097 Predicted membrane pro 25.8 1.4E+02 0.003 27.8 4.7 103 286-400 29-131 (390)
358 PRK10720 uracil transporter; P 25.4 6.4E+02 0.014 24.6 10.8 26 192-217 384-409 (428)
359 PF06826 Asp-Al_Ex: Predicted 24.7 4E+02 0.0087 22.0 8.9 85 72-158 55-140 (169)
360 PF10225 DUF2215: Uncharacteri 24.1 5.1E+02 0.011 23.0 8.2 57 121-181 29-85 (249)
361 COG0861 TerC Membrane protein 24.1 5.2E+02 0.011 23.1 8.0 58 140-199 30-87 (254)
362 TIGR00836 amt ammonium transpo 23.9 4.3E+02 0.0093 25.5 8.0 50 133-182 282-331 (403)
363 TIGR01667 YCCS_YHJK integral m 23.5 8.9E+02 0.019 25.6 11.1 54 340-393 42-95 (701)
364 PF06570 DUF1129: Protein of u 23.4 4.7E+02 0.01 22.3 8.6 153 240-392 23-193 (206)
365 TIGR03644 marine_trans_1 proba 23.1 6.9E+02 0.015 24.2 9.4 48 134-182 297-344 (404)
366 PLN02776 prenyltransferase 22.3 5.9E+02 0.013 23.9 8.3 21 105-125 78-98 (341)
367 TIGR03173 pbuX xanthine permea 21.7 7.3E+02 0.016 23.9 9.8 94 65-159 20-114 (406)
368 TIGR01666 YCCS hypothetical me 21.6 9.7E+02 0.021 25.3 11.6 53 341-393 43-95 (704)
369 PTZ00370 STEVOR; Provisional 21.0 4.6E+02 0.0099 23.7 6.8 24 436-459 247-270 (296)
370 COG1742 Uncharacterized conser 20.4 1E+02 0.0022 22.7 2.3 48 72-119 54-101 (109)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.6e-40 Score=300.86 Aligned_cols=370 Identities=18% Similarity=0.197 Sum_probs=296.3
Q ss_pred CCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH
Q 010692 36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF 115 (503)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 115 (503)
++.+.+..|.... ... ....++|++++|+|+|..+.|++.|+|.+++.+++++...+.||+.||++++..+.++.+
T Consensus 15 l~aLa~~~F~igt---tEf-v~~gLLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~ 90 (394)
T COG2814 15 LLALALAAFAIGT---TEF-VPVGLLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIV 90 (394)
T ss_pred HHHHHHHHHHHHh---HHH-HHHhchHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHH
Confidence 3344444444444 222 233444999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHH
Q 010692 116 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAF 195 (503)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f 195 (503)
+++++++++||+.++++|++.|+..|.+++...++..+..|+++|++++++...+.+++.++|.++|.++.+.+|||+.|
T Consensus 91 ~n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F 170 (394)
T COG2814 91 SNLLSALAPSFAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATF 170 (394)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhch
Q 010692 196 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 275 (503)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (503)
+..++++++..+..+..+| +++ .+++.+..
T Consensus 171 ~~ia~l~ll~~~~~~~~lP--~~~--~~~~~~~~---------------------------------------------- 200 (394)
T COG2814 171 LAIAVLALLALLLLWKLLP--PSE--ISGSLPGP---------------------------------------------- 200 (394)
T ss_pred HHHHHHHHHHHHHHHHhCC--Ccc--CCCCCCcc----------------------------------------------
Confidence 9999999999999998888 111 11111100
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchh
Q 010692 276 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISN 354 (503)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 354 (503)
.++..+++|+|.++...+..++...+.+...+|+..++++..|.+.... .....++++.++|++++|++.|| +.+
T Consensus 201 ~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~--- 276 (394)
T COG2814 201 LRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPR--- 276 (394)
T ss_pred hhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cch---
Confidence 1334578899999999999999999999999999999999999887655 55577889999999999999999 555
Q ss_pred hHHHHHHH-HHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692 355 AFKLLSAA-TFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 355 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
+.+... .++......+....++.+..+...++.++..............+ .-|+.++.+.++.....|+ |..+|.
T Consensus 277 --~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nl-gia~GA 352 (394)
T COG2814 277 --RALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPALQGLQTRLAR-LAPDAADLAGSLNVAAFNL-GIALGA 352 (394)
T ss_pred --hHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHH-HHHHHH
Confidence 444444 33334444444444555555555555555554443344444444 4468899999999999999 999999
Q ss_pred hhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692 434 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 468 (503)
Q Consensus 434 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 468 (503)
.++|.+.|+.| +....++.+...+++..+.+...
T Consensus 353 ~lGG~v~~~~g-~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 353 ALGGLVLDALG-YAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred HHHHHHHHhhc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999966 77778887777777766665433
No 2
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.2e-42 Score=304.29 Aligned_cols=376 Identities=17% Similarity=0.163 Sum_probs=295.9
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+|.++|.+|+|++.+++.+.|.++..+.|.++||.+.|+.+.+++++.++.+++++++++++.+.+.-++.|...|
T Consensus 53 p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng~fQg 132 (448)
T COG2271 53 PALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNGWFQG 132 (448)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhc
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH--HhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
..+|.+...+..|++++|||+..++++++.++|..+.|++. +++..+.+||..|++.++++++..++.++..+++|+.
T Consensus 133 ~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 133 MGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred CCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 99999999999999999999999999999999999999999 8898888999999999999999999999888776554
Q ss_pred CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 299 (503)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (503)
..-|.-++... +..+...++++++..+ ....-.+.+++||.+|.+.++.++..
T Consensus 213 ~GLP~ie~~~~------------------d~~e~~~~~~~~~~ls---------~~~i~~~YVL~Nk~iW~la~a~vfvY 265 (448)
T COG2271 213 EGLPPIEEYRG------------------DPLEIYEEEKENEGLT---------AWQIFVKYVLKNKLIWLLALANVFVY 265 (448)
T ss_pred cCCCCHHHhhc------------------CchhhhhhhccCCCcc---------HHHHHHHHHHcChHHHHHHHHHHHHH
Confidence 33322222110 0000000000000000 00133567899999999999999999
Q ss_pred HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh-
Q 010692 300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS- 377 (503)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 377 (503)
..-+++..|.|.|+.+..+.+...+ ...+++-.++++|.+++||++||+.+.++. ...++..+...+........+
T Consensus 266 ivR~gi~dW~p~YL~e~k~~s~~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~--p~~~i~~~~i~~~~~~~w~~~~ 343 (448)
T COG2271 266 VVRYGINDWGPLYLSEVKGFSLVKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRG--PMALIFMLLITASLVLYWLAPN 343 (448)
T ss_pred HHHHHHhhhHHHHHHHhcCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccc--hHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999997665 444677799999999999999997532111 233333333333333333333
Q ss_pred -hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 378 -SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 378 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
+.+...++++..|++..+-....-....|..|++..|++.|+...+.+++|...+....|++.|.+| |...|.+..+.
T Consensus 344 ~~~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~g-W~g~Fi~~~~~ 422 (448)
T COG2271 344 GSYLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWG-WDGGFIVLSIA 422 (448)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCC-CcchHHHHHHH
Confidence 3355566666666666555545555677888889999999999999999899989999999999876 77888887777
Q ss_pred HHHHHHHHHHH
Q 010692 457 FFLAAGIWFVG 467 (503)
Q Consensus 457 ~~~~~~~~~~~ 467 (503)
.+++.++.+..
T Consensus 423 a~l~~lll~~~ 433 (448)
T COG2271 423 ALLAILLLLPV 433 (448)
T ss_pred HHHHHHHHHHH
Confidence 66666655543
No 3
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=6.1e-40 Score=320.46 Aligned_cols=377 Identities=16% Similarity=0.127 Sum_probs=269.1
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh-----hhHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAIC 132 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~ 132 (503)
+...|++.+|+|++.++.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.++.++ ++|++.+++.
T Consensus 49 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 128 (467)
T PRK09556 49 KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMIAL 128 (467)
T ss_pred hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHHHH
Confidence 33347789999999999999999999999999999999999999999999988888877776665 5899999999
Q ss_pred HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc---hhHHHHHHHHHHHHHHHHHH
Q 010692 133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLA 209 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~ 209 (503)
|+++|++.+...+...++++||+|+++||+++++++.+.++|.++++++..++.+.. +||..|.+.+++.++..++.
T Consensus 129 r~l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~~~i~~ 208 (467)
T PRK09556 129 WALSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALIIGFIG 208 (467)
T ss_pred HHHHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999887766543 69999999888888777776
Q ss_pred HhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHH-HHHHhhhhhH
Q 010692 210 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVY 288 (503)
Q Consensus 210 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 288 (503)
+++.++.+++. +....++. .+ +...++.+..++++.. ..+. .+..+++|.+
T Consensus 209 ~~~~~~~p~~~------~~~~~~~~---~~---------~~~~~~~~~~~~~~~~----------~~~~~~~~~l~~~~~ 260 (467)
T PRK09556 209 LRYGSDSPEEL------GWGKAEEI---FG---------EPISEEDKETESTDMT----------KWQIFVEYVLKNPVI 260 (467)
T ss_pred HHhCCCChhhc------CCCChhhc---cc---------CccchhhhccccccCc----------HHHHHHHHHHcChHH
Confidence 66655432211 11000000 00 0000000000000000 0011 2346789999
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHH
Q 010692 289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 367 (503)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 367 (503)
|...+..++......++..|+|.|+++.+|.+.... .......++.+++.++.|+++||+++|+ ..........
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~-----~~~~~~~~~~ 335 (467)
T PRK09556 261 WLLCFANIFLYIVRIGIDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRR-----ALVACIALAL 335 (467)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCc-----hHHHHHHHHH
Confidence 998888888888888888999999998888886554 4456677889999999999999999883 3322222211
Q ss_pred HH-HHHHH-HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh----
Q 010692 368 IS-CLTAF-CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---- 441 (503)
Q Consensus 368 ~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~---- 441 (503)
.. .+... ..++.+...+..++.+++.............+..|++.+|++.|+.+...++.|.+++|.+.|++.|
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~ 415 (467)
T PRK09556 336 IIFTLGVYQHATSEYMYLASLFALGFLVFGPQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKN 415 (467)
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHHHHhhHHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhccccc
Confidence 11 11111 1123333333334444332222222334566888889999999999988887576889999999999
Q ss_pred --------hhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692 442 --------HVNNWRKTTLALTSIFFLAAGIWFVGI 468 (503)
Q Consensus 442 --------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 468 (503)
..+ |+..|++..++.+++.+..+...
T Consensus 416 g~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 416 GTPIFGYTLTG-WAGTFAALDIAAIGCICLMAIVA 449 (467)
T ss_pred ccccccccccC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 444 88888888777777766555443
No 4
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=1.4e-38 Score=304.39 Aligned_cols=346 Identities=16% Similarity=0.110 Sum_probs=267.5
Q ss_pred cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692 60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139 (503)
Q Consensus 60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 139 (503)
.+|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++++++++++|++.++++|+++|++
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 110 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA 110 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 34788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
.+...+...+++.|++|+++|++++++...+.++|..++|++++.+.+.+|||+.|++.++++++..+..+...|+.++
T Consensus 111 ~~~~~~~~~~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~- 189 (390)
T PRK03545 111 HAIFWSITASLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS- 189 (390)
T ss_pred HHHHHHHHHHHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC-
Confidence 9989999999999999999999999999999999999999999999998999999999998887776666555554211
Q ss_pred CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 299 (503)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (503)
+++.. .++.++.+|+|.++......++..
T Consensus 190 -----~~~~~----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 218 (390)
T PRK03545 190 -----EHSGS----------------------------------------------LKSLPLLFRRPALVSLYLLTVVVV 218 (390)
T ss_pred -----CCcch----------------------------------------------HHHHHHHHhCcHHHHHHHHHHHHH
Confidence 00000 023456778888876655555555
Q ss_pred HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692 300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 378 (503)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (503)
........+.+.++++..+.+.... .+.....++.+++.++.+++.||+++| .......+.......+....++
T Consensus 219 ~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~l~~~~~~ 293 (390)
T PRK03545 219 TAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSG-----FLLIAIALLLVCLLLLLPAANS 293 (390)
T ss_pred HHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchh-----HHHHHHHHHHHHHHHHHHHhch
Confidence 5555556677778887777775444 444566788899999999999999876 4444433333333333333344
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 458 (503)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 458 (503)
.+......++.+++.....+.......+.. |+.++++.|+.+...+. |..+||.+.|++.|..| ++..+...+.+.+
T Consensus 294 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-g~~~G~~~~G~~~~~~g-~~~~~~~~~~~~~ 370 (390)
T PRK03545 294 EWHLSVLSIFWGIAIMCIGLAMQVKVLKLA-PDATDVAMALFSGIFNI-GIGAGALLGNQVSLHLG-LSSIGYVGAALAL 370 (390)
T ss_pred HHHHHHHHHHHHHHHhcchHHHHHHHHHhC-CCcHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhHHHHHHHHHHH
Confidence 455555555555555444444555555554 57889999999888777 88889999999999987 7777877776666
Q ss_pred HHHHHHH
Q 010692 459 LAAGIWF 465 (503)
Q Consensus 459 ~~~~~~~ 465 (503)
++.+...
T Consensus 371 ~~~~~~~ 377 (390)
T PRK03545 371 AALVWSI 377 (390)
T ss_pred HHHHHHH
Confidence 5555443
No 5
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=3.9e-39 Score=309.05 Aligned_cols=395 Identities=15% Similarity=0.154 Sum_probs=270.7
Q ss_pred cccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHH
Q 010692 33 LSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV 112 (503)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 112 (503)
|....++++..+.+.++....+... +.+++|+|++.++.|++.+++.+++++++++.|+++||+|||+++..++++
T Consensus 7 ~~~~~~~~~~~~~~~~d~~~~~~~~----~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~ 82 (412)
T TIGR02332 7 RRLIIFLFILFIFSFLDRINIGFAG----LTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVL 82 (412)
T ss_pred hHHHHHHHHHHHHHHhhhhhHHHHH----HhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHH
Confidence 4444444444444444333433333 667899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-----
Q 010692 113 WTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----- 187 (503)
Q Consensus 113 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----- 187 (503)
++++++++++++|++.+++.|+++|++.+...+....++.|++|+++|++++++++.+..+|.++++++++++.+
T Consensus 83 ~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~ 162 (412)
T TIGR02332 83 WGIASTATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLM 162 (412)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999988763
Q ss_pred -cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCc-ccccccccccccccCcccCCCCCccccccchhhhhhhhcccch
Q 010692 188 -HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP-AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGE 265 (503)
Q Consensus 188 -~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (503)
..|||+.|++.++++++..++.+++.||++++.+- ++++++.. + +..+.... +..+. + ...+++..
T Consensus 163 ~~~gwr~~f~~~~~~~l~~~~~~~~~~~~~p~~~~~l~~~~~~~~-~---~~~~~~~~--~~~~~-~---~~~~~~~~-- 230 (412)
T TIGR02332 163 ALKGWQWLFLLEGFPSVILGVMTWFWLDDSPDKAKWLDEEDKKAL-K---EMIDNDQL--TLEQP-E---GAFAHAAM-- 230 (412)
T ss_pred CccchhHHHHHHHHHHHHHHHHHhhccCCCcccCCCCCHHHHHHH-H---HHHHhccc--ccccc-c---cccccccc--
Confidence 46999999999998888777777777775533110 00000000 0 00000000 00000 0 00000000
Q ss_pred hhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhh-cccchhh-HHHHHhhhhhhhhchhhhhh
Q 010692 266 SRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNAD-MMFGGVTIVCGIVGTISGGF 343 (503)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~g~ 343 (503)
.....++.++ ++.+|...+..++.....+.+.+|+|.++++. .+.+... ..+.....++.+++.++.|+
T Consensus 231 --------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~ 301 (412)
T TIGR02332 231 --------PQRSMLREIF-TPAIMLYTLAYFCLTNTLSAINIWTPQILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSR 301 (412)
T ss_pred --------cHHHHHHHhc-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHH
Confidence 0002234444 47788777777777788888899999999873 3555433 34557778889999999999
Q ss_pred hhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHH
Q 010692 344 ILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 423 (503)
Q Consensus 344 l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 423 (503)
++||+++|+ ........+......+.....+........++..++.....+.......+..|++.|+++.|+.+..
T Consensus 302 l~dr~~~r~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~a~g~~~~~ 377 (412)
T TIGR02332 302 HSDRLKERK----HHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGSFSAMAIFWTTPDQSISLQARAIAIAVINAT 377 (412)
T ss_pred HhcccCccH----HHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhhhhHHHhhcccccchHHHHHHHHHHHHh
Confidence 999999772 2222222222222222222222222221222222222222222223334567789999999999999
Q ss_pred HhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692 424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 457 (503)
Q Consensus 424 ~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 457 (503)
.++ |++++|.+.|.+.|..|+|...+.+.+++.
T Consensus 378 ~~~-g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 378 GNI-GSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred hhh-hhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 888 999999999999999888888877665543
No 6
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=2.5e-38 Score=306.14 Aligned_cols=375 Identities=14% Similarity=0.153 Sum_probs=264.8
Q ss_pred ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 010692 59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 138 (503)
Q Consensus 59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (503)
..+|.+.+++|+|..+.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.+++++++|++.+++.|++.|+
T Consensus 44 ~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 123 (434)
T PRK11663 44 AAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNAF 123 (434)
T ss_pred HhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 34477789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccC
Q 010692 139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 218 (503)
Q Consensus 139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 218 (503)
+.|...+...+++.|++|+++|++++++++.+.++|..+++.+++.+.+.+|||+.|++.+++.++..+...+..||.++
T Consensus 124 ~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~p~ 203 (434)
T PRK11663 124 FQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDKPQ 203 (434)
T ss_pred HHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCCHh
Confidence 99988999999999999999999999999999999999999999999988999999999988877666555555565432
Q ss_pred CCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHH-HHHhhhhhHHHHHHHHHH
Q 010692 219 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT-KVLLQEKVYVVNVLGYIA 297 (503)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 297 (503)
+...++..++.. + . ++ ...+. +++.. ..+ +.+ +..++++.+|...+..++
T Consensus 204 ~~~~~~~~~~~~-----~----------~-~~--~~~~~-~~~~~-------~~~---~~~~~~~~~~~~~~~~~~~~~~ 254 (434)
T PRK11663 204 AMGLPSVGEWRH-----D----------A-LE--LAQQQ-EGAGL-------SRK---EILTKYVLLNPYIWLLSFSYVL 254 (434)
T ss_pred hcCCCCcccccc-----c----------c-cc--cchhc-cccCC-------Chh---hhHHHHHhcChHHHHHHHHHHH
Confidence 211111000000 0 0 00 00000 00000 000 111 135678888888777777
Q ss_pred HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692 298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 376 (503)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
.......+..|+|.|+.+..|.+.... .......++.++++++.|++.||+.++.+.................+.....
T Consensus 255 ~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 334 (434)
T PRK11663 255 VYVVRAAINDWGNLYMSETLGVDLVTANSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF 334 (434)
T ss_pred HHHHHHHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc
Confidence 777777788899999987788886544 4556777889999999999999984332111011111111111111111111
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
.+........+..+++.............+..|++.|+++.|+.+...++ |.+++|.+.|++.|..| +...|.+.+++
T Consensus 335 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~p~~~g~l~~~~g-~~~~f~~~~~~ 412 (434)
T PRK11663 335 ASYVMQAACFFTIGFFVFGPQMLIGMAAAECSHKEAAGAATGFVGLFAYL-GAALSGYPLAKVLEIWH-WTGFFVVISIA 412 (434)
T ss_pred ccHHHHHHHHHHHHHHHhhHHHHHHHHHHhcccHhhHHhHHHHHHHHHHH-HHHHhcccHHHHHHhcc-cHHHHHHHHHH
Confidence 22222222222222222111122334556777789999999999988888 98999999999999887 87888887777
Q ss_pred HHHHHHHH
Q 010692 457 FFLAAGIW 464 (503)
Q Consensus 457 ~~~~~~~~ 464 (503)
.+++.+..
T Consensus 413 ~~~~~~~~ 420 (434)
T PRK11663 413 AGISALLL 420 (434)
T ss_pred HHHHHHHH
Confidence 66655444
No 7
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=1.1e-37 Score=292.47 Aligned_cols=349 Identities=12% Similarity=0.029 Sum_probs=255.5
Q ss_pred cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692 60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139 (503)
Q Consensus 60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 139 (503)
.+|.+++|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+....++|++.++++|+++|++
T Consensus 13 ~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g 92 (368)
T TIGR00903 13 VLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAALG 92 (368)
T ss_pred hHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhH
Confidence 33888999999999999999999999999999999999999999987766555555443333347999999999999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
.+. .+.....++|++|+++|++++++.+.+..+|.++++++++++.+.+|||+.|++.++++++..++.++..||++++
T Consensus 93 ~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p~~ 171 (368)
T TIGR00903 93 QPF-LLNAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALPFQ 171 (368)
T ss_pred hHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCCCC
Confidence 986 4566677799999999999999999999999999999999999999999999999998888888777777774322
Q ss_pred CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 299 (503)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (503)
.+ +.. + . . +..+++++++++|.+|...+..++..
T Consensus 172 ~~-----~~~-------------------~---~--~-----------------~~~~~~~~ll~~~~~~~~~~~~~~~~ 205 (368)
T TIGR00903 172 AA-----EGF-------------------G---F--K-----------------DAVKEFGALAGRKDLWIIGAILGFGV 205 (368)
T ss_pred CC-----CCc-------------------c---h--H-----------------HHHHHHHHHHcChhHHHHHHHHHHHH
Confidence 10 000 0 0 0 00123567889999999999999999
Q ss_pred HHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692 300 FVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 379 (503)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (503)
...+++.+|+|.|+++ .+.+........+..+. +.+..+++.||..||..+. .......++..+.........+.
T Consensus 206 ~~~~~~~~wlp~~L~~-~g~s~~~~~~~~l~~~~---g~~g~~~~~d~~~r~~~r~-~~~~~~~~~~a~~~~~~~~~~~~ 280 (368)
T TIGR00903 206 ALFDNLAIWLEAALRP-AGLEDIAGDAVALAILA---GLIGVAVIPDRVARAGLRS-IYIRAAALLIAAFFLALAFELNR 280 (368)
T ss_pred HHHHHHHHHHHHHHHH-CCCChHHHHHHHHHHHH---HHHHHHHhhHHhhhhhhHH-HHHHHHHHHHHHHHHHHHHcccc
Confidence 9999999999999976 45664433333343443 3444688999987653221 22222222222222222222333
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 459 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 459 (503)
+..+...++.+++....++..+.+..|.+|++.|+++.|+.+...++ +++.+|.+.+.+.. + ....|.+.++..++
T Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~-~~~~~~~~~~~~~~--~-~~~~f~~~~~~~~i 356 (368)
T TIGR00903 281 LALFAFIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRA-ISVALALAAMLFIS--S-AEAYFTFLAILITI 356 (368)
T ss_pred HHHHHHHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHH-HHHHHHHHHHHHhc--C-HHHHHHHHHHHHHH
Confidence 33344445555555566666778889999999999999999999998 88778988887774 3 44567766666655
Q ss_pred HHHHH
Q 010692 460 AAGIW 464 (503)
Q Consensus 460 ~~~~~ 464 (503)
+.+..
T Consensus 357 ~~~~~ 361 (368)
T TIGR00903 357 AFAIA 361 (368)
T ss_pred HHHHH
Confidence 55543
No 8
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-38 Score=286.93 Aligned_cols=377 Identities=33% Similarity=0.530 Sum_probs=288.6
Q ss_pred hhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHH
Q 010692 29 KSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV 108 (503)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 108 (503)
.++.++.+.++++...+..++... .+..++.+++.||++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+
T Consensus 28 ~~~~~~~l~il~~vnlmny~Dr~~----iagv~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~v 103 (493)
T KOG1330|consen 28 MKSPTLTLVILCLVNLMNYADRYT----IAGVLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAV 103 (493)
T ss_pred cccchHHHHHHHHHHHHHHhhhhh----hhhhhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEee
Confidence 334455555666666666654333 3334488899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc
Q 010692 109 GLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH 188 (503)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 188 (503)
|..++.++.++++++..||++.++|.+.|+|.+...|..+++++|.+|.++|++++++++.+..+|..+|.+.+..+.+.
T Consensus 104 G~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~ 183 (493)
T KOG1330|consen 104 GIFIWTLAVFASGFSNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASL 183 (493)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999877
Q ss_pred ch-hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhh
Q 010692 189 LN-WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR 267 (503)
Q Consensus 189 ~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (503)
.+ |||.|++.++++++.+++.+++.+|..++..++.+.+.. .
T Consensus 184 ~~~Wr~af~~~avl~vi~~~L~~~f~~eP~rga~~~~~~~~~-----------------------~-------------- 226 (493)
T KOG1330|consen 184 TFWWRWAFRGSAVLGVIVGLLVFLFVREPERGARDEVDGENK-----------------------M-------------- 226 (493)
T ss_pred ccceEEEEEeehHHHHHHHHHHHhhccCcccccccccccCCc-----------------------C--------------
Confidence 66 999999999999999999999887643321100000000 0
Q ss_pred hhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhccc---c-hhhHHHHHhhhhhhhhchhhhhh
Q 010692 268 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHM---S-NADMMFGGVTIVCGIVGTISGGF 343 (503)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~g~ 343 (503)
.+...+.+++.+.+.+++.+....+......+...++..|.|.+....+.+ + .....+..+...++.+|.+++|.
T Consensus 227 -~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~~~G~lGvl~Ggi 305 (493)
T KOG1330|consen 227 -VKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTCAGGSLGVLFGGI 305 (493)
T ss_pred -CCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHHhhchhhheehHH
Confidence 011233457788888888888888888888888888899988866554322 2 23456778888999999999999
Q ss_pred hhhcccccchhhH-----HHH-HHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692 344 ILDQMGATISNAF-----KLL-SAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 415 (503)
Q Consensus 344 l~d~~~~~~~~~~-----~~~-~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (503)
++||+.++.++.. .+. ..+...++.+..+.... .+.+..++++++........+.+...+..+.+||+.|.+
T Consensus 306 isd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~ 385 (493)
T KOG1330|consen 306 ISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTT 385 (493)
T ss_pred HHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccccceeeEecCcccccH
Confidence 9999655332211 111 11122222222222211 233444444444444445667777788889999999999
Q ss_pred HHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692 416 SMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 447 (503)
Q Consensus 416 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 447 (503)
+.++...+...+|.+.+|.+.|.+.|..-+++
T Consensus 386 a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 386 AYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred HHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 99999999999999988989999999876565
No 9
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=1.8e-36 Score=289.29 Aligned_cols=349 Identities=12% Similarity=-0.026 Sum_probs=260.5
Q ss_pred CCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHH
Q 010692 55 PPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRM 134 (503)
Q Consensus 55 ~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 134 (503)
...++.+|.+++|+|+|.++.|++.+.+.+++.+++++.|++.||+|||+++..+..+++++.+++++++|++.++++|+
T Consensus 26 ~~~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~ 105 (393)
T PRK09705 26 TSVGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSAL 105 (393)
T ss_pred hccchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHH
Confidence 33445558889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
++|++.+...+....++.+++| ++|+++++++..+..+|..+|+.+++.+.++. +||+.+.+.++..++..+..++..
T Consensus 106 l~Gig~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~ 184 (393)
T PRK09705 106 LGGVGIGIIQAVMPSVIKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQS 184 (393)
T ss_pred HHHhHHHHHhhhhhHHHHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999997 67999999999999999999999999988775 899998877665544333222221
Q ss_pred ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692 214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 293 (503)
Q Consensus 214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (503)
++.++ ++++.. ...++.+++++.|...+
T Consensus 185 ~~~~~-----~~~~~~-----------------------------------------------~~~~~~l~~~~~~~l~~ 212 (393)
T PRK09705 185 AREVA-----SSHKTT-----------------------------------------------TTPVRVVFTPRAWTLGV 212 (393)
T ss_pred cCCCc-----cccCCC-----------------------------------------------cCCcccccCHhHHHHHH
Confidence 11100 000000 00112335566676666
Q ss_pred HHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692 294 GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 372 (503)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (503)
..++....+.....|.|.++++ .+.+.... ....+..++.++++++.+++.||+++| +....+..+.......
T Consensus 213 ~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~-----~~~~~~~~l~~~~~~~ 286 (393)
T PRK09705 213 YFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRR-----KLLMLALVLQLVGFCG 286 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccch-----HHHHHHHHHHHHHHHH
Confidence 6666667777888899999987 67776544 455677889999999999999999987 5554444443333332
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-CCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692 373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 451 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 451 (503)
....+..... ...++.+++.+...+.......+..+ ++++++..|+.+...+. +..++|.+.|++.|..|++...+.
T Consensus 287 ~~~~~~~~~~-~~~~l~g~g~g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~~gp~~~G~l~~~~g~~~~~~~ 364 (393)
T PRK09705 287 FIWLPLQLPV-LWAMVCGLGLGGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFI-IAGLAPWFSGVLRSISGNYLMDWA 364 (393)
T ss_pred HHHccchHHH-HHHHHHHHhccchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHH
Confidence 2222211111 12234455555555655556666665 47899999999888888 778899999999999988877787
Q ss_pred HHHHHHHHHHHHH
Q 010692 452 ALTSIFFLAAGIW 464 (503)
Q Consensus 452 ~~~~~~~~~~~~~ 464 (503)
+.+++.++..+..
T Consensus 365 ~~~~~~~~~~~~~ 377 (393)
T PRK09705 365 FHALCVVGLMIIT 377 (393)
T ss_pred HHHHHHHHHHHHH
Confidence 7776665554443
No 10
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=8.1e-37 Score=294.47 Aligned_cols=379 Identities=17% Similarity=0.145 Sum_probs=273.1
Q ss_pred cccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHH
Q 010692 31 QSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGL 110 (503)
Q Consensus 31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 110 (503)
++|..+.+.....+...++....+... |.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+++..+.
T Consensus 12 ~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 87 (406)
T PRK11551 12 RLALTIGLCFLVALLEGLDLQSAGVAA----PRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSV 87 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHH
Confidence 445455555555555555443444444 6668999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692 111 SVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 190 (503)
Q Consensus 111 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 190 (503)
++.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.+++.+.+..+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 167 (406)
T PRK11551 88 ALFGLFSLATAQAWDFPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAA 167 (406)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999988889
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhh
Q 010692 191 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLN 270 (503)
Q Consensus 191 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (503)
||+.|++.+++.++..++..+..||.++...++ .+.. . ++.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~------------------------~------~~~------- 208 (406)
T PRK11551 168 WRHIFYVGGVGPLLLVPLLMRWLPESRAFAQAA--GAGK------------------------Q------RAP------- 208 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCChhHHhcc--Ccch------------------------h------hhh-------
Confidence 999999988776666666666666643211000 0000 0 000
Q ss_pred hhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhccc
Q 010692 271 QLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMG 349 (503)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~ 349 (503)
..+...+..+.+..+...+..++.....+....|.|.++++ .|.++... .......++.+++.++.|++.||++
T Consensus 209 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g 283 (406)
T PRK11551 209 ----VLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLR 283 (406)
T ss_pred ----hHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 00000000011222233333344444555667788988877 46665433 4456667888999999999999999
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccc
Q 010692 350 ATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD 429 (503)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~ 429 (503)
+| +.+...........+.....++.+......++.+++.....+....+..+.+|+++|+++.|+.+...++ |.
T Consensus 284 ~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~ 357 (406)
T PRK11551 284 PR-----RVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVRGTGVGAAVAVGRL-GS 357 (406)
T ss_pred HH-----HHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhhhhhhhHHHHhhhH-HH
Confidence 87 5554443333333333333344444444555555555556677778888999999999999999988887 88
Q ss_pred ccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692 430 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 430 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 463 (503)
.++|.+.|++.+..+++...+.....+.+++..+
T Consensus 358 ~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~ 391 (406)
T PRK11551 358 MAGPLLAGQLLALGRSTVGVIGASIPVILVAALA 391 (406)
T ss_pred HHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHH
Confidence 8999999999998766655555555444444433
No 11
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=5.9e-37 Score=305.41 Aligned_cols=397 Identities=15% Similarity=0.138 Sum_probs=275.1
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
+..+|.+.++++++..+.+++.+++.++.+++++++|+++||+|||+++++++++.+++.++++++++++.++++|++.|
T Consensus 187 s~ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G 266 (742)
T TIGR01299 187 GFVLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSG 266 (742)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 33447778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-------------chhHHHHHHHHHHHHH
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------------LNWRYAFWGEAILMLP 204 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------------~gwr~~f~~~~~~~~~ 204 (503)
++.++..+...+++.|++|+++|++.++++..++.+|.++++.++..+... .+||+.+++.++++++
T Consensus 267 ~g~g~~~p~~~~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll 346 (742)
T TIGR01299 267 FGIGGAIPIVFSYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVF 346 (742)
T ss_pred HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999887665432 3699999988877655
Q ss_pred HHHHHHhccccccCCCCcccccccccccccccCcccCCCC---Cccc----cccchhhhhh-----hhcccch-----hh
Q 010692 205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLN---DHVS----EDISDQASER-----SIKSIGE-----SR 267 (503)
Q Consensus 205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~----~~~~~~~~~~-----~~~~~~~-----~~ 267 (503)
. ++..+++||++++.....+.++... ...+....+.. .... +.++.....+ +++..+. .+
T Consensus 347 ~-ll~~~~lPESPrwL~~~gr~~eA~~--iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 423 (742)
T TIGR01299 347 A-IGALTFMPESPRFFLENGKHDEAWM--ILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVR 423 (742)
T ss_pred H-HHHHHHcCCCHHHHHHCCCHHHHHH--HHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhh
Confidence 4 4455666887765322111111000 00001100000 0000 0000000000 0000000 00
Q ss_pred hhhhhhchHHHHHHHhhhhh---HHHHHHHHHHHHHHhhhhhccccchhhhh----c-----------------------
Q 010692 268 FLNQLSQFSQDTKVLLQEKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNI----Y----------------------- 317 (503)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----------------------- 317 (503)
........+.+++.+++.+. .+.+.+.+++..+.++++..|+|.++.+. +
T Consensus 424 ~~~~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (742)
T TIGR01299 424 ALSEGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLEN 503 (742)
T ss_pred hhhhhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhh
Confidence 01112223345666665543 33444556777788999999999765431 0
Q ss_pred --------------cc----------------------------------------------------------------
Q 010692 318 --------------HM---------------------------------------------------------------- 319 (503)
Q Consensus 318 --------------~~---------------------------------------------------------------- 319 (503)
+.
T Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 583 (742)
T TIGR01299 504 QIHRGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGC 583 (742)
T ss_pred hhccccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCcc
Confidence 00
Q ss_pred ------c----hhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q 010692 320 ------S----NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVG 389 (503)
Q Consensus 320 ------~----~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (503)
+ ........+..++.+++.+++++++||+||| ++++.+.++.++.+++.....+....++..++.
T Consensus 584 ~~~~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr-----~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~ 658 (742)
T TIGR01299 584 PIDFDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRL-----RMLAGSMVLSCISCFFLSFGNSESAMIALLCLF 658 (742)
T ss_pred CccCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 0 0011223455688899999999999999998 777766666666655555555545555555566
Q ss_pred HHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 390 ELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
+++.+..++....++.+.+|++.|++++|+.+...++ |.+++|++.|.+.+.. ...++++.+++.++++++.+
T Consensus 659 g~~~~~~~~~~~a~~aEl~Pt~~Rgta~Gi~~~~~rl-Gaiigp~i~g~L~~~~--~~~pf~i~a~~lll~~ll~~ 731 (742)
T TIGR01299 659 GGLSIAAWNALDVLTVELYPSDKRATAFGFLNALCKA-AAVLGILIFGSFVGIT--KAAPILFASAALACGGLLAL 731 (742)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHHHHH
Confidence 6666677788888999999999999999999988888 9999999999887753 34566666666555544444
No 12
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=9.4e-37 Score=297.52 Aligned_cols=362 Identities=12% Similarity=0.023 Sum_probs=249.1
Q ss_pred cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692 60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139 (503)
Q Consensus 60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 139 (503)
.+|.+.+|+|++.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.++++|+++|++
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~ 137 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS 137 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 34778899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc----C-----cchhHHHHHHHHHHHHHHHHHHH
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG----S-----HLNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~----~-----~~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
.+... ....+++|++|+++|++++++.....++|..+++.+.+.+. + ..|||+.|++.+++.++..++.+
T Consensus 138 ~~~~~-~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~~ 216 (476)
T PLN00028 138 LATFV-SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILVL 216 (476)
T ss_pred HHhhH-HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHHH
Confidence 88654 45678999999999999999998887788877766665442 1 25899999999998887776666
Q ss_pred hccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692 211 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 290 (503)
Q Consensus 211 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (503)
++.++.++. +.+.. + ++ .+ .++ ....+.+++.++++++|.
T Consensus 217 ~~~~~~p~~-----~~~~~---~---------------~~------~~-~~~----------~~~~~~~~~~~~~~~~~~ 256 (476)
T PLN00028 217 TLGQDLPDG-----NYREL---K---------------KS------GT-MPK----------DSFSKVLRYGVTNYRTWI 256 (476)
T ss_pred HHcCcCCCC-----chhhH---H---------------hc------Cc-ccc----------ccHHHHHHHHHcCchhHH
Confidence 554321110 00000 0 00 00 000 000133556678888887
Q ss_pred HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhh-H-HHHHHHHHHHH
Q 010692 291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNA-F-KLLSAATFLGA 367 (503)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~-~~~~~~~~~~~ 367 (503)
..+..++.......+..+.|.|+.+..+.+.... .+..+..++.+++++++|+++||+++|...+ + ........+..
T Consensus 257 ~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~ 336 (476)
T PLN00028 257 LALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGG 336 (476)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHH
Confidence 7776665555566677789999888788886544 5556778899999999999999998764321 1 22222222222
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh--hhh
Q 010692 368 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH--VNN 445 (503)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~--~g~ 445 (503)
+..+.....++.+...+.+++.+++.+...+....+..+ +.++.+|++.|+.+.. +.+++.+.+++.+. .++
T Consensus 337 i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~-----g~lg~~i~~~l~~~~~~~~ 410 (476)
T PLN00028 337 VFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGIVPF-VSRRSLGVISGLTGAG-----GNVGAVLTQLLFFTGSSYS 410 (476)
T ss_pred HHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhcccCcc-cChhhchhhhhhhhcc-----ccHHHHHHHHHHHhcCCcc
Confidence 222222223333333333444444444344444444433 4567899999887543 33355566666553 345
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 010692 446 WRKTTLALTSIFFLAAGIWFVGI 468 (503)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~ 468 (503)
|...|++.+++.+++.++.+..+
T Consensus 411 y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 411 TETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HhhHHHHHHHHHHHHHHHHHhee
Confidence 88888888887777776666544
No 13
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=2.6e-36 Score=293.71 Aligned_cols=374 Identities=13% Similarity=0.075 Sum_probs=255.8
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G 137 (503)
|.+.++ |++..+.|++.+.+.+++++++++.|+++||+|||++++++.++.+++.+++++++ +++.+++.|++.|
T Consensus 53 p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~g 131 (452)
T PRK11273 53 PYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFLCG 131 (452)
T ss_pred HHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHHHH
Confidence 555777 99999999999999999999999999999999999999999999999999888764 7888999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHH-HHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
++.+...+.....+.|++|+++|++++++++.+.++|.. .+|+++..+....+||+.|++.+++.++..++.+++.||.
T Consensus 132 i~~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~~~~ 211 (452)
T PRK11273 132 WFQGMGWPPCGRTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMMRDT 211 (452)
T ss_pred HHHhccchHHHHHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHccCC
Confidence 999988888888999999999999999999999999874 4565544443345999999999988887777777776664
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHH-HHHHhhhhhHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQD-TKVLLQEKVYVVNVLGY 295 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 295 (503)
+++...+++++.. ++.. ++.++ ++.++. ..+ +. .+.+++++.+|...+..
T Consensus 212 ~~~~~~~~~~~~~----------~~~~-----~~~~~----~~~~~~-------~~~---~~~~~~~~~~~~~~~~~l~~ 262 (452)
T PRK11273 212 PQSCGLPPIEEYK----------NDYP-----DDYNE----KHEQEL-------TAK---QIFMQYVLPNKLLWYIAIAN 262 (452)
T ss_pred HhhcCCCChhhhh----------hccc-----ccccc----ccCCCc-------cHH---HHHHHHHHcChHHHHHHHHH
Confidence 3321111000000 0000 00000 000000 000 11 23467889999888877
Q ss_pred HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 374 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
++.....+....|+|.|+++..+.+.... ....+..++.+++.++.|+++||++++++. ........+.....+...
T Consensus 263 ~~~~~~~~~~~~~~P~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~--~~~~~~~~l~~~~~~~~~ 340 (452)
T PRK11273 263 VFVYLLRYGILDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRG--ATGVFFMTLVTIATIVYW 340 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc--hHHHHHHHHHHHHHHHHH
Confidence 77777777888899999998877775443 344566778888999999999999543211 111111111111111111
Q ss_pred H--hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHH
Q 010692 375 C--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLA 452 (503)
Q Consensus 375 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~ 452 (503)
. ..+.+.......+.+...............+.+|++.+|++.|+.+...+..+...+|.+.|++.|..| |+..|++
T Consensus 341 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g-~~~~f~~ 419 (452)
T PRK11273 341 LNPAGNPTVDMACMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFMV 419 (452)
T ss_pred HhcccChHHHHHHHHHHHHHHHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhc-chHHHHH
Confidence 1 112222222233333322222222334566888899999999999888777334457999999999987 8888888
Q ss_pred HHHHHHHHHHHHHHHH
Q 010692 453 LTSIFFLAAGIWFVGI 468 (503)
Q Consensus 453 ~~~~~~~~~~~~~~~~ 468 (503)
++++.+++++......
T Consensus 420 ~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 420 MIGGSILAVILLIVVM 435 (452)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8777676666555444
No 14
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=2.6e-36 Score=292.08 Aligned_cols=370 Identities=14% Similarity=0.041 Sum_probs=241.9
Q ss_pred CCchhHHHHHHhhhcccCCCCCcccccccccccC---CCccchhhHHH---HHHHHHHHHHhHHHHhhhhcCCchhHHHH
Q 010692 36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFK---LNNFQDGVLSS---AFMVGLLVASPIFASLAKSHNPFRLIGVG 109 (503)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~---~s~~~~g~~~s---~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 109 (503)
+...++..+++.++........ +.+.++++ .+..+.+...+ ...++..++++++|+++||+|||+++..+
T Consensus 24 ~~~~~~~~~~~~~d~~~~~~~~----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~ 99 (432)
T PRK10406 24 IVGASSGNLVEWFDFYVYSFCS----LYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLIS 99 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHH
Confidence 3333344555555444433333 55678874 45554444444 44455559999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHH--------HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHH
Q 010692 110 LSVWTFATAGCGSSFDFW--------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 181 (503)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~--------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 181 (503)
+++++++++++++++++. .++++|+++|++.|..++...++++|++|+++|+++.++.+.+...|.++++.+
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~ 179 (432)
T PRK10406 100 VCMMCFGSLVIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLALLV 179 (432)
T ss_pred HHHHHHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999988864 588999999999999999999999999999999999999999998998888877
Q ss_pred HHhhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccch
Q 010692 182 GGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD 253 (503)
Q Consensus 182 ~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (503)
+..+. ..+|||++|++.++++++... .....||+++. ++++
T Consensus 180 ~~~~~~~~~~~~~~~~gWr~~F~i~~~~~ll~~~-~~~~~~e~~~~----~~~~-------------------------- 228 (432)
T PRK10406 180 VVVLQQTLEDAELREWGWRIPFALGAVLAVVALW-LRRQLDETSQQ----ETRA-------------------------- 228 (432)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHHHHHH-HHhcCCCCchH----HHhh--------------------------
Confidence 65543 257999999998876654432 22222332110 0000
Q ss_pred hhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH-HHHHhhhhhccccchhhhhcccchhhH-HHHHhhh
Q 010692 254 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI 331 (503)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 331 (503)
.++ ..++++++++++.+...+...+ ....++.+..|+|.|+++..+.+.... ....+..
T Consensus 229 -----~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~~~~~~i~~ 289 (432)
T PRK10406 229 -----LKE--------------AGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVASGIMTAAL 289 (432)
T ss_pred -----hcc--------------cccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 000 0234566778777766555443 355677788899999988777775443 3344555
Q ss_pred hhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH-HHH-Hh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692 332 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TAF-CL--SSLYGFLALFTVGELLVFATQAPVNYVCLHS 407 (503)
Q Consensus 332 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (503)
+...++.++.|+++||++|| +.+.....+..+... ... .. .+....+....+..+..+...+....+..|.
T Consensus 290 ~~~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 364 (432)
T PRK10406 290 FVFMLIQPLIGALSDKIGRR-----TSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTSISGILKAEM 364 (432)
T ss_pred HHHHHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66677788889999999988 444433332222211 111 11 1222222222222223333334456677899
Q ss_pred cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 408 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
+|++.|+++.|+.+...+.+.+...|.+.+.+ +..|.+...+++.++..+++.+..+
T Consensus 365 fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~ 421 (432)
T PRK10406 365 FPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSL 421 (432)
T ss_pred CCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHH
Confidence 99999999999998776653344477777754 5556565555555555555444433
No 15
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=2.6e-36 Score=292.96 Aligned_cols=379 Identities=14% Similarity=0.097 Sum_probs=270.5
Q ss_pred CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHH-HHHH
Q 010692 57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI-CRML 135 (503)
Q Consensus 57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l 135 (503)
.+..++++.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|++
T Consensus 38 ~~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l 117 (455)
T TIGR00892 38 VTVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFI 117 (455)
T ss_pred hhhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 455568889999999999999999999999999999999999999999999999999999999999999999875 5799
Q ss_pred HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 215 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 215 (503)
.|++.+...+...+++.++++ ++|++++++.+.+..+|..++|++++.+.+.+|||+.|++.+++.++..+..++..|+
T Consensus 118 ~G~~~~~~~~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~ 196 (455)
T TIGR00892 118 TGLGLAFNFQPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV 196 (455)
T ss_pred HHhcchhhhhHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 999998777777888999996 6799999999999999999999999999988999999999998877666555544433
Q ss_pred ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692 216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 295 (503)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (503)
.......+++.+ + ..+..... ++... ... . +..+. ..++ +++++|.++...+..
T Consensus 197 ~~~~~~~~~~~~-----~---~~~~~~~~----~~~~~--~~~---~-------~~~~~-~~~~-~~~~~~~~~~~~~~~ 250 (455)
T TIGR00892 197 GPSQRVSKSKSK-----E---GLPPDGST----KKLSK--KST---A-------EKINR-FLDF-SLFTHRGFLVYLSGN 250 (455)
T ss_pred Cccccccccccc-----c---cCCCCCcc----ccccc--cch---h-------hhhhh-hcch-HHhcCchHHHHHHHH
Confidence 111000000000 0 00000000 00000 000 0 00000 0112 467888888887777
Q ss_pred HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 374 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
++..........++|.|.++ .+.+.... .+.++.+++.++++++.+++.||...+..+. ..+..+.+......++..
T Consensus 251 ~l~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~~~~~l~~ll~~ 328 (455)
T TIGR00892 251 VIMFLGFFAPIIFLVPYAKD-KGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQ-YLFSFALLFNGLTHLLCA 328 (455)
T ss_pred HHHHHHccchHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHH-HHHHHHHHHHHHHHHHHH
Confidence 77777777777888888876 56665444 4456677888888999999999743221111 222222222222222223
Q ss_pred HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692 375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 454 (503)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 454 (503)
..++.+.++...++.+++.+...+.....+.+.+|+++++++.|+.+...++ |.+++|.+.|.+.|..++|...|++.+
T Consensus 329 ~~~~~~~~~i~~~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~l-g~~igp~i~G~l~~~~g~~~~~f~~~~ 407 (455)
T TIGR00892 329 LAGDYTGLVIYCIFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECC-AVLIGPPLAGRLVDATKNYKYIFYASG 407 (455)
T ss_pred HhchHHHHHHHHHHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHH-HHHccccceeeeehhcCCcchHHHHhh
Confidence 3445555555666667776667777788888999999999999999988888 999999999999998877888888877
Q ss_pred HHHHHHHHHHH
Q 010692 455 SIFFLAAGIWF 465 (503)
Q Consensus 455 ~~~~~~~~~~~ 465 (503)
++.+++.+...
T Consensus 408 ~~~li~~~~~~ 418 (455)
T TIGR00892 408 SIVVSAGLFLA 418 (455)
T ss_pred HHHHHHHHHHH
Confidence 76666555443
No 16
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=6e-36 Score=288.32 Aligned_cols=374 Identities=18% Similarity=0.196 Sum_probs=275.7
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|++.|++.+
T Consensus 18 ~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 97 (399)
T TIGR00893 18 PMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLGAAEA 97 (399)
T ss_pred HHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 55689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+....++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..++.++..||.+++.+
T Consensus 98 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (399)
T TIGR00893 98 PFFPGIILIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDPPQKAK 177 (399)
T ss_pred hhhhHHHHHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCCCCccc
Confidence 99999999999999999999999999999999999999999999888899999999998887777776666665432211
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
..+++++. ...+.. .++ .+.++++ +......++.+++|+++...+..++....
T Consensus 178 ~~~~~~~~------~~~~~~------~~~----~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (399)
T TIGR00893 178 WLTEEEKY------IVVGGL------LAE----QQGKGPS-----------TPKKYQIKELLKDRRVWGLALGQFLVNIG 230 (399)
T ss_pred cCCHHHHh------hcchhh------ccc----ccccccc-----------CCCccchHHHhcCHHHHHHHHHHHHHHhH
Confidence 10000000 000000 000 0000000 00113456778889999888888888888
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH---hh
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---LS 377 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~ 377 (503)
...+..+.|.|+++..+.++... .+.....++.+++.++.+++.||+++|+..................+.... .+
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (399)
T TIGR00893 231 LGFFLTWFPTYLVQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVN 310 (399)
T ss_pred HHHHHHHHHHHHHHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccch
Confidence 88888999999998888876544 445667788899999999999999988411100000111111111111111 11
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 457 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 457 (503)
+.+..+....+..+. ....+....+..+..|++.|+++.|+.+...+. |..++|.+.|++.|..|++...+.+.+++.
T Consensus 311 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~ 388 (399)
T TIGR00893 311 IPYAALALVALGFFG-LGAGAIGWALISDNAPGNIAGLTGGLINSLGNL-GGIVGPIVIGAIAATTGSFAGALMVVAALA 388 (399)
T ss_pred hHHHHHHHHHHHHhc-hhhhhHHHHHHHhhcChhHHHHHHHHHHHHHHH-hhhhhhHHhhhhccCCCchhHHHHHHHHHH
Confidence 223333333333333 235677888889999999999999999988887 889999999999998876777887777666
Q ss_pred HHHHHHH
Q 010692 458 FLAAGIW 464 (503)
Q Consensus 458 ~~~~~~~ 464 (503)
+++.+..
T Consensus 389 ~~~~~~~ 395 (399)
T TIGR00893 389 LIGALSY 395 (399)
T ss_pred HHHHHHH
Confidence 5555444
No 17
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1.5e-35 Score=282.46 Aligned_cols=336 Identities=14% Similarity=0.108 Sum_probs=253.5
Q ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
+|++.+++|.++++.|+..+++.++..+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|++.
T Consensus 43 l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 122 (394)
T PRK10213 43 LTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLAL 122 (394)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHhh
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
+...+...+++.|++|+++|++++++...+.++|..+||++++.+.+.+|||+.|++.++++++..+......||.++
T Consensus 123 g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~-- 200 (394)
T PRK10213 123 GGFWAMSASLTMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG-- 200 (394)
T ss_pred HHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc--
Confidence 999999999999999999999999999999999999999999999999999999999887766655444444454210
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 300 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (503)
+++.. .++.++.+++|.++...+..++...
T Consensus 201 ----~~~~~----------------------------------------------~~~~~~~l~~~~~~~~~~~~~~~~~ 230 (394)
T PRK10213 201 ----EPSHQ----------------------------------------------KQNTFRLLQRPGVMAGMIAIFMSFA 230 (394)
T ss_pred ----ccccc----------------------------------------------hhHHHHHhcCHHHHHHHHHHHHHHH
Confidence 00000 0123456788888877665555555
Q ss_pred Hhhhhhccc-cchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692 301 VIGAYSYWG-PKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 378 (503)
Q Consensus 301 ~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (503)
.......+. |.|. +..|.++... .......++.+++.++.+++.||.+++ .......+.....+++....++
T Consensus 231 ~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~~~~-----~l~~~~~~~~~~~~~l~~~~~~ 304 (394)
T PRK10213 231 GQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRSVKL-----ALAGAPLVLAVSALVLTLWGSD 304 (394)
T ss_pred HHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhccchh-----HHHHHHHHHHHHHHHHHHHhhh
Confidence 555555565 5555 4567776544 444566678888889999999985432 3333333323333333333445
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692 379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 457 (503)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 457 (503)
.+......++.+++.+...+.....+.+..| ++++.+.+......+. |..+||.+.|++.|..| +...+...+.+.
T Consensus 305 ~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l-g~~~G~~l~G~l~~~~g-~~~~~~~~~~~~ 380 (394)
T PRK10213 305 KIVATGVAIIWGLTFALVPVGWSTWITRSLA-DQAEKAGSIQVAVIQL-ANTCGAAIGGYALDNIG-LTSPLMLSGTLM 380 (394)
T ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHCc-ccHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hhhHHHHHHHHH
Confidence 5555556666777777777777777777775 5566777776666666 88899999999999877 545555554443
No 18
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=3.1e-35 Score=276.74 Aligned_cols=347 Identities=13% Similarity=0.016 Sum_probs=263.7
Q ss_pred ccccccccc-ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----hHHHHHHH
Q 010692 58 PSWFTPKRG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAI 131 (503)
Q Consensus 58 ~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~ 131 (503)
+++.+.+.+ |+|+|++|.+++.+++.+++.++.++.|++.||+|.|+++.++.+++++.+++.+++ ++++.+++
T Consensus 54 ~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli 133 (462)
T PRK15034 54 SAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIV 133 (462)
T ss_pred HHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHH
Confidence 333355555 899999999999999999999999999999999999999999999999999999987 89999999
Q ss_pred HHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc------------------CcchhHH
Q 010692 132 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG------------------SHLNWRY 193 (503)
Q Consensus 132 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~------------------~~~gwr~ 193 (503)
.|++.|++ +..++.....+++|+|+++||+++|+.....++|..+++++...+. +..+||.
T Consensus 134 ~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~ 212 (462)
T PRK15034 134 IALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLAN 212 (462)
T ss_pred HHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHH
Confidence 99999998 6688899999999999999999999998777788777666654432 1345899
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692 194 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS 273 (503)
Q Consensus 194 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (503)
++++..++.++..++.+++.++.+ +++..
T Consensus 213 ~~~~~~~~~iv~~i~~~~~~~~~~------~~~~~--------------------------------------------- 241 (462)
T PRK15034 213 AAWIWVPLLAIATIAAWSGMNDIA------SSRAS--------------------------------------------- 241 (462)
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcc------ccccC---------------------------------------------
Confidence 998988888777777776653311 00000
Q ss_pred chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccch
Q 010692 274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS 353 (503)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 353 (503)
.++.+..+|+|+.|...+.+++.+..+.++.+++|.|.++.+... .......+..+...+.++++|+++||+|++
T Consensus 242 --~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~~~~-~~l~~~~l~~l~~~l~rplgG~LADRiG~~-- 316 (462)
T PRK15034 242 --IADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQFPDV-NILRLAFFGPFIGAIARSVGGAISDKFGGV-- 316 (462)
T ss_pred --HHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcChH-HHHHHHHHHHHHHHHHHHhhHHHHHhcCch--
Confidence 144667899999999999999999999999999999998865321 112223344577888899999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHH-HHHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC-----------------
Q 010692 354 NAFKLLSAATFLGAISCLT-AFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP----------------- 410 (503)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~-~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------- 410 (503)
+.+..+.....+.... .... .+.+.....+.....+.+......+-++.+.+|+
T Consensus 317 ---~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~ 393 (462)
T PRK15034 317 ---RVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQ 393 (462)
T ss_pred ---HHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHhhHHHHhhhhhhcccccccchhHHh
Confidence 5555444433333221 1112 1344444444445566667777777777776663
Q ss_pred ----CCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 411 ----SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 411 ----~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
++.|.+.|+....... |+++-|.+.|...+.+|++...++.+.+..+++.++..
T Consensus 394 ~~~~~~~g~v~G~v~a~G~~-Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~w 451 (462)
T PRK15034 394 REAVTETAAALGFISAIGAV-GGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLLTW 451 (462)
T ss_pred hHHHHHHHHHHHHHHHHHHc-ccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHH
Confidence 1577889998777777 88888999999999999998888888877776665544
No 19
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=6.9e-36 Score=293.33 Aligned_cols=378 Identities=10% Similarity=0.005 Sum_probs=245.6
Q ss_pred chhHHHHHHhhhcccCCCCCcccccccccccCCCccc-hhh-----HHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHH
Q 010692 38 PPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQ-DGV-----LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS 111 (503)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~-----~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 111 (503)
...+..+++.++........ +.+.++|+.+.++ .++ +.++..+++.+++++.|+++||+|||+++.++++
T Consensus 20 ~~~~g~~~~~~d~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~ 95 (490)
T PRK10642 20 AASLGNAMEWFDFGVYGFVA----YALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIV 95 (490)
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHH
Confidence 33455666666655544444 5557888644322 222 2577889999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHH--------HHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHH
Q 010692 112 VWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 183 (503)
Q Consensus 112 ~~~~~~~~~~~~~~~~~--------l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 183 (503)
+++++++++++++|+++ ++++|+++|++.|..++...+++.|++|+++||++.++...+..+|..+|+.+..
T Consensus 96 l~~i~~~~~a~~~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~G~~lg~~~~~ 175 (490)
T PRK10642 96 IMSISTFCIGLIPSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEYSPDRKRGFMGSWLDFGSIAGFVLGAGVVV 175 (490)
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 7899999999999999999999999999999999999999998888888887665
Q ss_pred hhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhh
Q 010692 184 VVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQA 255 (503)
Q Consensus 184 ~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (503)
.+. ..+|||+.|++.++++++ .++.....||+++.....++.+.. +. +..
T Consensus 176 ~~~~~~~~~~~~~~gWR~~f~i~~~~~l~-~~~~~~~~~esp~~~~~~~~~~~~------------~~-----~~~---- 233 (490)
T PRK10642 176 LISTIVGEANFLDWGWRIPFFIALPLGII-GLYLRHALEETPAFQQHVDKLEQG------------DR-----EGL---- 233 (490)
T ss_pred HHHHhcCHHHhcCccHHHHHHHHHHHHHH-HHHHHHcCCCChhHHHHHHhhhhh------------cc-----ccc----
Confidence 432 257999999997765543 333334456643321000000000 00 000
Q ss_pred hhhhhcccchhhhhhhhhchHHHHHHHhhh-hhHHH-HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhh
Q 010692 256 SERSIKSIGESRFLNQLSQFSQDTKVLLQE-KVYVV-NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV 332 (503)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 332 (503)
.+.++ .++++++++ ++.+. .....++....++.+..|+|.|+++..+.+.... .......+
T Consensus 234 --~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~ 297 (490)
T PRK10642 234 --QDGPK--------------VSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPSYLSHNLHYSEDHGVLIIIAIMI 297 (490)
T ss_pred --ccccc--------------CCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 00000 112333332 22222 2222334455677778899999988777775433 34455567
Q ss_pred hhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHH-HHHHH--HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC
Q 010692 333 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI-SCLTA--FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK 409 (503)
Q Consensus 333 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 409 (503)
+.+++.++.|+++||+||| +.+..+.+...+ ..... ...++........++.+++.+...+....+..+.+|
T Consensus 298 ~~~~~~~~~g~l~dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~p 372 (490)
T PRK10642 298 GMLFVQPVMGLLSDRFGRR-----PFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILNCFTGVMASTLPAMFP 372 (490)
T ss_pred HHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 7888899999999999998 554444332221 11111 111223333334444444444455556667778899
Q ss_pred CCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692 410 PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 410 ~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 463 (503)
++.|+++.|+.+..... ++.++|.+.|++.+..+++...+++..+..+++.+.
T Consensus 373 ~~~Rg~~~g~~~~~~~~-~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~ 425 (490)
T PRK10642 373 THIRYSALAAAFNISVL-VAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLIT 425 (490)
T ss_pred CccchHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHH
Confidence 99999999986666666 456689999999887654444444444444433333
No 20
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.1e-35 Score=284.42 Aligned_cols=349 Identities=12% Similarity=0.029 Sum_probs=262.2
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
+.+.|.+.+++|+|.++.|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|++.|
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 44458889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
++.+...+.....+.+++| ++|++++++...+.++|..+++++.+.+.+..|||+.|++.+++.++..+..+++.++.+
T Consensus 103 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (377)
T TIGR00890 103 AGVGIAYGIALNTAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYPP 181 (377)
T ss_pred HHHHHHHHhHHHHHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecCc
Confidence 9999888888888999987 569999999999999999887777777777789999999999988888777766654321
Q ss_pred CCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH
Q 010692 218 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 297 (503)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (503)
++ ++++.. +.+ .+ ..+.++.++++.++...+..++
T Consensus 182 ~~----~~~~~~--------------------~~~-------~~--------------~~~~~~~~~~~~~~~~~~~~~~ 216 (377)
T TIGR00890 182 GQ----LIKTNI--------------------EVS-------VK--------------DYTVWEMLRTPQFWVLYLSFFL 216 (377)
T ss_pred hh----ccccCc--------------------ccc-------hh--------------hhhHHHHHcCccHHHHHHHHHH
Confidence 11 000000 000 00 0123456778888777666555
Q ss_pred HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692 298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 376 (503)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
..........+.+.|.++ .+.+.... .+..+..++.+++.++.+++.||++|| +.+..+.....+..+.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~ 290 (377)
T TIGR00890 217 NAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQ-----KTMSIVFGISAVGMAAMLFI 290 (377)
T ss_pred HhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHc
Confidence 555554455556666554 55554333 455677788899999999999999988 55555544444444333333
Q ss_pred hh--HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692 377 SS--LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 454 (503)
Q Consensus 377 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 454 (503)
++ ........++.+.+.+...+....+..+.+|+++|+++.|+.+...++ |..++|.+.|.+.|..| |+..+.+.+
T Consensus 291 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~~f~~~~ 368 (377)
T TIGR00890 291 PMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANSAANYGFLYTAKAV-AGIFGGLIASHALTEIG-FEYTFIVTG 368 (377)
T ss_pred ccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhhhhHhHHHHHHHHH-HHHHHHHHHHHHHhhhc-hhhHHHHHH
Confidence 32 222223344455555555566677888889999999999999988887 88999999999999877 777777776
Q ss_pred HHHHHH
Q 010692 455 SIFFLA 460 (503)
Q Consensus 455 ~~~~~~ 460 (503)
++.+++
T Consensus 369 ~~~~~~ 374 (377)
T TIGR00890 369 AFALTS 374 (377)
T ss_pred HHHHHh
Confidence 665543
No 21
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=7.9e-36 Score=293.03 Aligned_cols=390 Identities=12% Similarity=0.048 Sum_probs=282.8
Q ss_pred ccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHH
Q 010692 32 SLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS 111 (503)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~ 111 (503)
+|..+..+++..++...+.+..+... |++.+|+|.+.++.+|+.+.|.+++.++++++|+++||+|||++++.+.+
T Consensus 4 ~~~~~~~~~~~~~~~~ld~tiv~~a~----p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~ 79 (495)
T PRK14995 4 QWLTLVIIVLVYIPVAIDATVLHVAA----PTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGT 79 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHH
Confidence 44555666777777777665666555 77789999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692 112 VWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 190 (503)
Q Consensus 112 ~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 190 (503)
+++++++++++++|++.++++|+++|+|.+...+.....+.+++ |+++|+++++++.....+|..+||.+++++.+++|
T Consensus 80 ~~~~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~g 159 (495)
T PRK14995 80 LFGLASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFY 159 (495)
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCC
Confidence 99999999999999999999999999999998888888887776 67889999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccc-------cccCcccCCCCCccccccchh--------h
Q 010692 191 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS-------VSEGSEASNLNDHVSEDISDQ--------A 255 (503)
Q Consensus 191 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~--------~ 255 (503)
||+.|++...++++..++.++..|+.+++. .++.+...... ..................... .
T Consensus 160 wr~~f~i~~~~~~~~~~l~~~~l~~~~~~~--~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 237 (495)
T PRK14995 160 WGSVFLINVPIVLVVMGLTARYVPRQAGRR--DQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLG 237 (495)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhCCCCCCCC--CCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHH
Confidence 999999998888777777777776633211 00000000000 000000000000000000000 0
Q ss_pred hhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhh
Q 010692 256 SERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCG 334 (503)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 334 (503)
.....+. +.+....+ .+++|+|.++...+..++......+...+.|.|+++..|.++... .......++.
T Consensus 238 ~f~~~e~--------~~~~p~~~-~~lf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~ 308 (495)
T PRK14995 238 LFIRTQL--------AASRPMID-MRLFTHRIILSGVVMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVAS 308 (495)
T ss_pred HHHHHHh--------cCCCCCcC-HHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHH
Confidence 0000000 00001111 357888888887777777777777888899999999999987655 4445666788
Q ss_pred hhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC
Q 010692 335 IVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS 411 (503)
Q Consensus 335 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 411 (503)
.++.++.|++.||+++| +.+..+..+..+........ .+.+......++.+++.+...++......+.+|++
T Consensus 309 ~~~~~~~g~l~~r~g~~-----~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~ 383 (495)
T PRK14995 309 GFSGPIAGILVSRLGLR-----LVATGGMALSALSFYGLAMTDFSTQQWQAWGLMALLGFSAASALLASTSAIMAAAPPE 383 (495)
T ss_pred HHHHHHHHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHH
Confidence 88999999999999987 55554444443333222221 23344455666777777777788888888899999
Q ss_pred CchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692 412 LRALSMAISTVSIHIFGDVPSSPLVGVLQDH 442 (503)
Q Consensus 412 ~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 442 (503)
+++.+.++.++..++ |..+|+.+.|.+.+.
T Consensus 384 ~~g~~~~~~~~~~~l-G~~~G~ai~g~i~~~ 413 (495)
T PRK14995 384 KAAAAGAIETMAYEL-GAGLGIAIFGLLLSR 413 (495)
T ss_pred hcchHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 999999999988888 888899999888763
No 22
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=5.4e-35 Score=279.72 Aligned_cols=352 Identities=12% Similarity=0.079 Sum_probs=261.4
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
+..+|++.+++|+|.++.+++.+.+.+++.+++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|+++|
T Consensus 27 g~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G 106 (394)
T PRK03699 27 GMVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLG 106 (394)
T ss_pred hhhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHH
Confidence 44447789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHHhcc-cc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIK-PL 215 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~ 215 (503)
++.+...+...+++.|++|+++|+++++..+....+|..++|.+.+.+. +..|||+.|++.+++.++..++.++.. |+
T Consensus 107 ~~~g~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~ 186 (394)
T PRK03699 107 VVSGITMSIGTFLITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA 186 (394)
T ss_pred HhhHhhccchhHHhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 9999999999999999999999999999999999999999999988765 457999999998887766655443321 11
Q ss_pred ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692 216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 295 (503)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (503)
+++++.. + + + +. .+. ..++.++...+..
T Consensus 187 -------~~~~~~~---~--------~------~----------~~-----------------~~~-~~~~~~~~~~~~~ 214 (394)
T PRK03699 187 -------LGKHAPK---A--------D------K----------PV-----------------AKE-KWGIGVLFLAIAA 214 (394)
T ss_pred -------ccccCcc---c--------c------C----------cc-----------------ccc-cCChHHHHHHHHH
Confidence 0000000 0 0 0 00 000 0134555566666
Q ss_pred HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 374 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
++.....+.+..|.|.|+++.++.++... .+.....++..+++++.+++.||+++| +.+.....+..+......
T Consensus 215 ~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~ 289 (394)
T PRK03699 215 LLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQ-----RILTVLAGLALVLMYLFV 289 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchh-----hHHHHHHHHHHHHHHHHH
Confidence 66666777888999999988888886544 445667788899999999999999998 555444444444333333
Q ss_pred HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692 375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 454 (503)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 454 (503)
..++.+......++.+++.+..++.......+.. ++.++...+......++ |..++|.+.|++.|..| +...++..+
T Consensus 290 ~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~-g~~i~p~~~G~l~~~~g-~~~~~~~~~ 366 (394)
T PRK03699 290 NTDDPSHLLYAILGLGFFSSAIYTTIITLGSQQT-KVASPKLVNFILTCGTI-GTMLTFVVTSPIVAHFG-LQAALLTAN 366 (394)
T ss_pred HcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHc-cCCCHHHHHHHHHhhhH-HHHHHHHHHHHHHHHhC-chhhhhhhH
Confidence 3344444444455556655555565555555554 44567788888777776 89999999999999887 667777777
Q ss_pred HHHHHHHHHHHHHHH
Q 010692 455 SIFFLAAGIWFVGIF 469 (503)
Q Consensus 455 ~~~~~~~~~~~~~~~ 469 (503)
++.+++.+..+...+
T Consensus 367 ~~~~~~~~~~~~~~~ 381 (394)
T PRK03699 367 GLYAVVFVMCILLGF 381 (394)
T ss_pred HHHHHHHHHHHHHHH
Confidence 766666555544433
No 23
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=2.7e-34 Score=273.73 Aligned_cols=347 Identities=15% Similarity=0.161 Sum_probs=252.3
Q ss_pred cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692 60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139 (503)
Q Consensus 60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 139 (503)
.+|.+++|+|.+.++.|++.+.+.+++.++++++|+++||+|||+++..+..+.+++.+++++++|++.+++.|+++|++
T Consensus 25 ~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~~ 104 (382)
T PRK10091 25 VLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGFP 104 (382)
T ss_pred ChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 33777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
.+...+....++.|++++++|++++++...+..+|..+++++++.+.+..+||+.|++.+++.++..+..++..||.++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~~- 183 (382)
T PRK10091 105 HGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIRD- 183 (382)
T ss_pred hHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCCc-
Confidence 9988888889999999999999999999999999999999999999988999999999998877776666555565211
Q ss_pred CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 299 (503)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (503)
+++.. . +...+.++++..+...+..++..
T Consensus 184 -----~~~~~---------------------~-------------------------~~~~~~~~~~~~~~~~~~~~~~~ 212 (382)
T PRK10091 184 -----EAKGG---------------------L-------------------------REQFHFLRSPAPWLIFAATMFGN 212 (382)
T ss_pred -----ccccC---------------------H-------------------------HHHHHHhcChHHHHHHHHHHHHH
Confidence 00000 0 00112345666665554444443
Q ss_pred HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH-Hhh
Q 010692 300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CLS 377 (503)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 377 (503)
........+.+.++.+..|.++... .+.....++.+++.++.+++.||++++ +.+.....+..+..+... ..+
T Consensus 213 ~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~~~~-----~~~~~~~~~~~i~~~~~~~~~~ 287 (382)
T PRK10091 213 AGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRYSPL-----RIAAVTDFIIVLALLMLFFFGG 287 (382)
T ss_pred HHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheeccccCch-----hHHHHHHHHHHHHHHHHHHHHh
Confidence 3444444566667777677776544 445677788999999999999999987 555444444333332222 223
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcc-cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHS-VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
+.+......++.+.+.....++......+. .+++.++.+. .+...++ |..+||.+.|++.|..++|...+.+.+++
T Consensus 288 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-g~~~Gp~~~G~l~~~~~~~~~~~~~~~~~ 364 (382)
T PRK10091 288 MKTASLIFAFICCAGLFALSAPLQILLLQNAKGGELLGAAG--GQIAFNL-GSAIGAYCGGMMLTLGLAYNYVALPAALL 364 (382)
T ss_pred hHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCcchHHHHHH--HHHHHHH-HHHHHHHHhHHHHHcccCcchHHHHHHHH
Confidence 333333333344443333334333333333 3345555443 3455666 99999999999999776788888887766
Q ss_pred HHHHHHHHHH
Q 010692 457 FFLAAGIWFV 466 (503)
Q Consensus 457 ~~~~~~~~~~ 466 (503)
..+.......
T Consensus 365 ~~~~~~~~~~ 374 (382)
T PRK10091 365 SFAAMSSLLL 374 (382)
T ss_pred HHHHHHHHHH
Confidence 6555554443
No 24
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=2e-34 Score=277.51 Aligned_cols=360 Identities=13% Similarity=0.034 Sum_probs=264.4
Q ss_pred hcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHH
Q 010692 30 SQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVG 109 (503)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~ 109 (503)
+++++....+.+..+...+ ......|.+ +.+.+++|.|+.+.++..+.+.+++.+++++.|+++||+|||+++..+
T Consensus 9 ~~~~~~~~~~~l~~~~~~~---~~~~~~~~~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~ 84 (406)
T PRK15402 9 RQALLFPLCLVLFEFATYI---ANDMIQPGM-LAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAG 84 (406)
T ss_pred HHHHHHHHHHHHHHHHHHh---hhhhHhcch-HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHH
Confidence 3444444444555554444 223333333 777899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc
Q 010692 110 LSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL 189 (503)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~ 189 (503)
..+.+++.++++++++++.+++.|+++|++.+...+...+++.|++|+++|++++++......+|..+||.+++.+.+..
T Consensus 85 ~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~ 164 (406)
T PRK15402 85 VAFFILTCLAILLAQSIEQFTLLRFLQGIGLCFIGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVL 164 (406)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHHHHhHhhhHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 99999999999999999999999999999999888889999999999999999999999989999999999999998888
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhh
Q 010692 190 NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL 269 (503)
Q Consensus 190 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (503)
+||+.|++.+++.++..+..++..||+.+.. ++..
T Consensus 165 ~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~---------------------------------------- 199 (406)
T PRK15402 165 PWRGMFVLFAALAALSFFGLWRAMPETAGRV-----GEKL---------------------------------------- 199 (406)
T ss_pred CccHHHHHHHHHHHHHHHHHHHhCCCCCccc-----cccc----------------------------------------
Confidence 9999999998888777666555555532110 0000
Q ss_pred hhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcc
Q 010692 270 NQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM 348 (503)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~ 348 (503)
+.++..++++.++++|.++...+..++..........+.|.++.+..+.++... .......++.+++.++.+++.||+
T Consensus 200 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~ 278 (406)
T PRK15402 200 -SLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRR 278 (406)
T ss_pred -cHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 000112446678889998887776666655555666678888888778876544 333444567788899999999999
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHH
Q 010692 349 GATISNAFKLLSAATFLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVS 423 (503)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 423 (503)
++| +.+..+..+........... .+.+......++.+++.+...+....... ..+++++|++.++.+..
T Consensus 279 ~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~ 352 (406)
T PRK15402 279 PLR-----SLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLTL-FSSDVSKGTVSAAMGML 352 (406)
T ss_pred CHH-----HHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHHh-hhccccccHHHHHHHHH
Confidence 887 55444443333222222211 12333444455555665555555544443 33458999999999887
Q ss_pred HhhcccccchhhHHHHHhhhhhH
Q 010692 424 IHIFGDVPSSPLVGVLQDHVNNW 446 (503)
Q Consensus 424 ~~~~g~~~~~~~~g~l~~~~g~~ 446 (503)
... +..+|+.+.+++.+..+.+
T Consensus 353 ~~~-~~~~g~~~~~~l~~~~~~~ 374 (406)
T PRK15402 353 SML-IFTVGIELSKHAYLGGGNG 374 (406)
T ss_pred HHH-HHHHHHHHHHhcccCCchH
Confidence 777 8888999999998887744
No 25
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=2.6e-35 Score=288.47 Aligned_cols=366 Identities=15% Similarity=0.154 Sum_probs=262.3
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHhhhhhhh
Q 010692 67 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 67 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~g~~~~~ 144 (503)
|++++..+.|++.+++.+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 789999999999999999999999999999999999999999999999999887654 568889999999999999999
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 223 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 223 (503)
+....++.|++|+++|++++++...+..+|.++++++++.+.+. .|||+.|++.++++++..++.+++.|+.++..+.
T Consensus 150 ~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~- 228 (465)
T TIGR00894 150 PATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC- 228 (465)
T ss_pred hhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC-
Confidence 99999999999999999999999999999999999999999988 4999999999998877777666666553321100
Q ss_pred cccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 010692 224 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 303 (503)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (503)
++++ + .+.+++..++++++. . ...+++++++++.+|...+..++.....+
T Consensus 229 ~~~~-----~--------------~~~i~~~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (465)
T TIGR00894 229 ISKF-----E--------------KKYINSSLQGQKGST-R----------QSLPIKAIPKSLPVWAIWFAIFGHFWLYT 278 (465)
T ss_pred CCHH-----H--------------HHHHHhhcccccCCC-C----------CCCCHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 0000 0 000000000000000 0 01246778899999999998888888888
Q ss_pred hhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHH----HHHHHHHHHHHHHH-HHHH-h
Q 010692 304 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK----LLSAATFLGAISCL-TAFC-L 376 (503)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~----~~~~~~~~~~~~~~-~~~~-~ 376 (503)
.+.+|+|.|+++..+.+.... ....+..++.+++.+++|++.||+++|+...+. .............. .... .
T Consensus 279 ~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 358 (465)
T TIGR00894 279 ILPTYLPTFISWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLS 358 (465)
T ss_pred HHHHHHHHHHHHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999888886544 455677888999999999999998755322111 11111111111111 1111 1
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh--hhHHHHHHHHH
Q 010692 377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV--NNWRKTTLALT 454 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~--g~~~~~~~~~~ 454 (503)
.+.+..+..+++.+.+.+...+.......+ ..|+.+|.+.|+.+....+ |.+++|.+.|++.+.. +.|...|.+.+
T Consensus 359 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~g~~~g~~~~~~~l-~~~i~p~l~g~~~~~~~~~~~~~~f~~~~ 436 (465)
T TIGR00894 359 AAFYLTIIILTLANAVSSGPLAGVLINSLD-LAPRFLGFIKGITGLPGFI-GGLIASTLAGNILSQDSKNVWLIVFLIMA 436 (465)
T ss_pred CchHHHHHHHHHHHHHhhhhhhhhhhchhh-cChhHHHHHHHHHHHHHHH-HHHHHHHhhheeeCCCCchHHHHHHHHHH
Confidence 233333334444444433333333333334 4456899999999988887 8888999999887753 55777777777
Q ss_pred HHHHHHHHHHH
Q 010692 455 SIFFLAAGIWF 465 (503)
Q Consensus 455 ~~~~~~~~~~~ 465 (503)
+..+++.++..
T Consensus 437 ~~~~i~~i~~~ 447 (465)
T TIGR00894 437 FVNILCVIFYL 447 (465)
T ss_pred HHHHHHHHHee
Confidence 66666554443
No 26
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=4.9e-35 Score=282.59 Aligned_cols=384 Identities=11% Similarity=0.064 Sum_probs=260.1
Q ss_pred cccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHH
Q 010692 33 LSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV 112 (503)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 112 (503)
|.......+..+.+.++.... +...+.+++++|++..+.+++.+++.++..+++++.|+++||+|||++++.+.++
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~ 86 (405)
T TIGR00891 11 WNAFSAAWLGWLLDAFDFFLV----ALVLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVL 86 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 333333344444444433333 3333777899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--
Q 010692 113 WTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-- 190 (503)
Q Consensus 113 ~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-- 190 (503)
.+++.++++++++++.+++.|++.|++.+...+...+++.|++|+++|++++++.+.+..+|.++++.+++.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~ 166 (405)
T TIGR00891 87 FSAGTLACGFAPGYITMFIARLVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDG 166 (405)
T ss_pred HHHHHHHHHHhccHHHHHHHHHHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999887665
Q ss_pred hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhh
Q 010692 191 WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLN 270 (503)
Q Consensus 191 wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (503)
||+.|++.++..++.. +.....||+++..+++++++.. .+..++....+...+ .
T Consensus 167 w~~~f~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~-------~ 220 (405)
T TIGR00891 167 WRALFFISILPIIFAL-WLRKNIPEAEDWKEKHAGKALV------------------RTMVDILYGGEHRIA-------N 220 (405)
T ss_pred HHHHHHHHHHHHHHHH-HHHHhCCCChhHHHHhhhhhhh------------------hhHHHHHhccchhhh-------h
Confidence 9999988765544433 3333345532211000000000 000000000000000 0
Q ss_pred hhhchHHHHHHHh-hh-hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc
Q 010692 271 QLSQFSQDTKVLL-QE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ 347 (503)
Q Consensus 271 ~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~ 347 (503)
..++.....+... ++ +.+...................+.|.|+.+..+.+.... .+.....++.+++.++.+++.||
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr 300 (405)
T TIGR00891 221 IVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDW 300 (405)
T ss_pred hhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000001111111 11 112222333333344455666788999988788876544 44566778889999999999999
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 348 MGATISNAFKLLSAATFLGAISCLT-AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 348 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
+++| +.+..+.......... .....+.+......++.+++.....+.....+.+..|++.|+++.|+.+...++
T Consensus 301 ~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 375 (405)
T TIGR00891 301 LGRR-----KAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNL 375 (405)
T ss_pred hCch-----hhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHH
Confidence 9988 5554444433222222 222233333333334455555556667777888999999999999999888888
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHH
Q 010692 427 FGDVPSSPLVGVLQDHVNNWRKTTLA 452 (503)
Q Consensus 427 ~g~~~~~~~~g~l~~~~g~~~~~~~~ 452 (503)
|..++|++.|++.|..|.|...+..
T Consensus 376 -g~~~g~~~~g~l~~~~g~~~~~~~~ 400 (405)
T TIGR00891 376 -GGALAPIIGALLAQRLDEYGTALAS 400 (405)
T ss_pred -HHHHHHHHHHHHHHhccccchhHHh
Confidence 8888999999999998866554443
No 27
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.8e-34 Score=277.84 Aligned_cols=351 Identities=12% Similarity=0.089 Sum_probs=237.7
Q ss_pred cccc--CCCccchhhHH-----HHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHH--------HH
Q 010692 65 RGDF--KLNNFQDGVLS-----SAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SI 129 (503)
Q Consensus 65 ~~~~--~~s~~~~g~~~-----s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l 129 (503)
.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++..+.++++++++++++++|++ .+
T Consensus 50 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 128 (438)
T PRK09952 50 NREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVLL 128 (438)
T ss_pred HHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Confidence 4444 56655 45553 345567789999999999999999999999999999999999999987 58
Q ss_pred HHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc--------CcchhHHHHHHHHHH
Q 010692 130 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAIL 201 (503)
Q Consensus 130 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~ 201 (503)
+++|+++|++.|..++....++.|++|+++|++..+..+.+..+|.+++..+...+. ..+|||++|++.+++
T Consensus 129 ~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~~~ 208 (438)
T PRK09952 129 VTLRAIQGFAVGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSIVL 208 (438)
T ss_pred HHHHHHHHhhhcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHHHH
Confidence 889999999999999999999999999999999999999999999999887776654 257999999988776
Q ss_pred HHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHH
Q 010692 202 MLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKV 281 (503)
Q Consensus 202 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (503)
.++. +......||+++..+.+++.+ +.+++. ...+.
T Consensus 209 ~l~~-~~l~~~~~es~~~~~~~~~~~------------------------------~~~~~~-------------~~~~~ 244 (438)
T PRK09952 209 VLIA-LWVRNGMEESAEFEQQQHEQA------------------------------AAKKRI-------------PVIEA 244 (438)
T ss_pred HHHH-HHHHHhCCCChhHHHHHhhcc------------------------------cccccC-------------CHHHH
Confidence 5432 222222233221100000000 000000 01123
Q ss_pred HhhhhhHHHHHH-HHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692 282 LLQEKVYVVNVL-GYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 359 (503)
Q Consensus 282 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (503)
++++|+.+...+ ..++.....+....|.|.|+++..+.+.... ....+..+..+++.++.|+++||++|| +.+
T Consensus 245 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr-----~~~ 319 (438)
T PRK09952 245 LLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRR-----RVY 319 (438)
T ss_pred HHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHH
Confidence 445665555443 3444455666777889999988778775433 233445566778888999999999998 555
Q ss_pred HHHHHHHHHHHHHHHH---hh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhh
Q 010692 360 SAATFLGAISCLTAFC---LS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 435 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 435 (503)
..+.++..+..+.... .. ..+..+...++.+++.+...+....+..|.+|++.|+++.|+.+.....+|+.++|.+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i 399 (438)
T PRK09952 320 ITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFI 399 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHH
Confidence 4444333322221111 11 2222233334445555555666778888999999999999997766664477889999
Q ss_pred HHHHHhhh-hhHHHHHHHHHHHHHHHHHHHH
Q 010692 436 VGVLQDHV-NNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 436 ~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
.+++.|.. ++|...+.+.+++.+++.+..+
T Consensus 400 ~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~ 430 (438)
T PRK09952 400 AAALVTYFGGSWHSVAIYLLAGCLISAMTAL 430 (438)
T ss_pred HHHHHHhcCCCchHHHHHHHHHHHHHHHHHH
Confidence 99998865 3466666666666555555444
No 28
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.9e-34 Score=275.89 Aligned_cols=358 Identities=13% Similarity=0.077 Sum_probs=250.4
Q ss_pred hHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692 40 LAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 119 (503)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 119 (503)
....++...+.+...+..|.+ +++++|.|+.+.|++.+++.+++.+++++.|+++||+|||++++.+.++.+++.++
T Consensus 21 ~~~~~~~~~~~~~~~~~l~~~---i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~ 97 (399)
T PRK05122 21 VMFTFISYLTIGLPLAVLPGY---VHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLL 97 (399)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHH
Confidence 333444444333444444322 47899999999999999999999999999999999999999999999998888776
Q ss_pred hhhh--------hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchh
Q 010692 120 CGSS--------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 191 (503)
Q Consensus 120 ~~~~--------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 191 (503)
++++ .+++.+++.|+++|++.+...+...+++.|++|+++|++++++.+.+..+|.++|+.+++.+.+.+||
T Consensus 98 ~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~ 177 (399)
T PRK05122 98 YLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGL 177 (399)
T ss_pred HHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccH
Confidence 6554 25778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhh
Q 010692 192 RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 271 (503)
Q Consensus 192 r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (503)
|+.+++.+++.++..+.. ...|+.. ++++++
T Consensus 178 ~~~~~~~~~~~~~~~~~~-~~~~~~~-----~~~~~~------------------------------------------- 208 (399)
T PRK05122 178 AGLGLLIMLLALLGLLLA-RPRPAVP-----PVKGER------------------------------------------- 208 (399)
T ss_pred HHHHHHHHHHHHHHHHHH-hcCCCCC-----CCCccc-------------------------------------------
Confidence 999888766544332221 1111100 000000
Q ss_pred hhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhccccc
Q 010692 272 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT 351 (503)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (503)
.+.++.++ ..+.......+....+.....+.|.|+.+. +.+.. ........++.+++.++.+++.||+++|
T Consensus 209 -----~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~g~l~~r~~~~ 279 (399)
T PRK05122 209 -----LPFRRVLG--RVWPYGMGLALASIGFGTIATFITLYYAAR-GWDGA-ALALTLFGVAFVGARLLFGNLINRLGGL 279 (399)
T ss_pred -----hhHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHc-ccccc-hHHHHHHHHHHHHHHHHHHHHHHHhccH
Confidence 00111111 111111122223334444556677776653 43322 2233456677788899999999999987
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccccc
Q 010692 352 ISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 431 (503)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 431 (503)
+.+..+..+...........++.+..+...++.+++.+..++.......+..|++.||++.|+.+...+. |..+
T Consensus 280 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~ 353 (399)
T PRK05122 280 -----RVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDL-SLGI 353 (399)
T ss_pred -----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHH
Confidence 5555544444444444444455555555566677766666666666777888889999999999888887 8777
Q ss_pred chhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 432 SSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 432 ~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
+|.+.|++.+..| ++..+++.+++.+++.++..
T Consensus 354 ~~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 386 (399)
T PRK05122 354 TGPLAGLVASWFG-YPSIFLAAALAALLGLALTW 386 (399)
T ss_pred HHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHH
Confidence 8889999999877 77888877776666554443
No 29
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=8e-35 Score=282.45 Aligned_cols=339 Identities=15% Similarity=0.126 Sum_probs=239.5
Q ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
.+.+.+++|+++.+.+++.+++.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.++++|+++|++.
T Consensus 41 ~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 120 (426)
T PRK12307 41 MYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMGM 120 (426)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 36778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
+...+....++.|++|+++|++++++...+..+|.++++.+.+.+.+.++||+.|++..+..++ .+......||+.+.
T Consensus 121 g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~-~~~~~~~~p~~~~~- 198 (426)
T PRK12307 121 AGEYACASTYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLL-VIYIRARAPESKEW- 198 (426)
T ss_pred hhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHH-HHHHHHHCCCChHH-
Confidence 9999999999999999999999999999999999999999999999889999999885543222 21111111321110
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH---
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA--- 297 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 297 (503)
++++.. +.+. +++.. .+....+++++++++.++........
T Consensus 199 ---~~~~~~----------~~~~----------------~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (426)
T PRK12307 199 ---EEAKLS----------GKGK----------------HSQSA-------WSVFSLSMKGLFNRAQFPLTLCVFIVLFS 242 (426)
T ss_pred ---HHhhhh----------cccc----------------ccccc-------hhhhhHHHHHHHhhchHHHHHHHHHHHHH
Confidence 000000 0000 00000 00011245667777776654433222
Q ss_pred HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692 298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 376 (503)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
.....+.+..++|.|+++. +.++... .......++.+++.++.+++.||++|| +.+..+.++..+..+.....
T Consensus 243 ~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~-----~~~~~~~~~~~~~~~~~~~~ 316 (426)
T PRK12307 243 IFGANWPIFGLLPTYLAGE-GFDTGVVSNLMTAAAFGTVLGNIVWGLCADRIGLK-----KTFSIGLLMSFLFIFPLFRI 316 (426)
T ss_pred HHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHHHHHHHHHHH
Confidence 2223334567888888774 6665433 444566788899999999999999987 55555554444333322222
Q ss_pred hhHHHHHHHHHHHHHHH--hhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 377 SSLYGFLALFTVGELLV--FATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
..........++.+... ....+..+..+.+.+|++.||++.|+.+...+. |+.++|.+.|++.+..|
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-~~~~gp~~~g~l~~~~g 385 (426)
T PRK12307 317 PQDNYLLLGACLFGLMATNVGVGGLVPKFLYDYFPLEVRGLGTGLIYNLAAT-SGTFNSMAATWLGITMG 385 (426)
T ss_pred ccccHHHHHHHHHHHHHhcccHhHHHHHHHHHhCcHHHHhhhhhHHHHHHhH-HHHHHHHHHHHHHHccc
Confidence 21111111222222211 122334556778889999999999999888888 88889999999999877
No 30
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=2.5e-34 Score=273.67 Aligned_cols=335 Identities=16% Similarity=0.107 Sum_probs=260.9
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-----HHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-----DFWSIAICRMLV 136 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~r~l~ 136 (503)
|.+..+++.++.+.+++.+++.++..++++++|+++||+|||++++.+.++.+++.++.++++ +++.+++.|+++
T Consensus 23 ~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (365)
T TIGR00900 23 PLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLAGIL 102 (365)
T ss_pred HHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 445688999999999999999999999999999999999999999999999999999988888 999999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
|++.+...+...+++.|++|+++|++++++.+.+..+|.++||.+++.+.+..|||+.|++.++..++..+..+...+++
T Consensus 103 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (365)
T TIGR00900 103 AIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSVRIPE 182 (365)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999999999999999999999999999999999989999999998877665555444433211
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
.+. +++++ . ++ +..++..+.++.++++|.++...+..+
T Consensus 183 ~~~---~~~~~-~----------------------~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (365)
T TIGR00900 183 LAA---SEIQA-L----------------------SN----------------AVLRDTREGIKFVLKNPLLRTLLLLAL 220 (365)
T ss_pred CCC---ccccc-c----------------------ch----------------hHHHHHHhHHHHHHcCcHHHHHHHHHH
Confidence 000 00000 0 00 000111234566778888888777666
Q ss_pred HHHHHhhhhh-ccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692 297 AYNFVIGAYS-YWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 374 (503)
Q Consensus 297 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
+......... .+.|.+.++.++.++... .+.....++.+++.++.+++.||.+++ +.+..+..+.........
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~ 295 (365)
T TIGR00900 221 LFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGLGALLGALLLGLLGRYFKRM-----ALMTGAIFVIGLAILVVG 295 (365)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhchh-----HHHHHHHHHHHHHHHHHH
Confidence 6666665555 788888887777776544 444566788889999999999999887 555544444443333333
Q ss_pred Hhhh-HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 375 CLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 375 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
..++ .+...+..++.+++.+...+....+..+.+|++.|+++.|+.+...+. +..++|.+.|++.|..|
T Consensus 296 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 296 LTPPNFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLGRVFGAQFSLSHA-AWPLGLILAGPLADHLG 365 (365)
T ss_pred hhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC
Confidence 3332 555566667777777777778888899999999999999999988888 88889999999998653
No 31
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.6e-34 Score=256.85 Aligned_cols=351 Identities=15% Similarity=0.112 Sum_probs=284.5
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH---HHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD---FWSIAICRM 134 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~ 134 (503)
+++-+.+.+|+|+|+.|.+++.++..+..++..++.|.+.||||.|++..++.++..+-.+..+++.+ +|++++.++
T Consensus 34 s~l~~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gl 113 (417)
T COG2223 34 SPLGVFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGL 113 (417)
T ss_pred HHHHhhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHH
Confidence 44446678999999999999999999999999999999999999999999999999999999998854 559999999
Q ss_pred HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch---hHHHHHHHHHHHHHHHHHHHh
Q 010692 135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN---WRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~ 211 (503)
+.|++.+ .+....+++++|||++++|.++|++. ..|+|..+...++..+....| ||....+..+..++..++.++
T Consensus 114 l~G~~Ga-sFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~ 191 (417)
T COG2223 114 LLGLAGA-SFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWL 191 (417)
T ss_pred HHhcccc-eehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987 67788999999999999999999999 999999999999999988888 999999999888888888887
Q ss_pred ccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchH-HHHHHHhhhhhHHH
Q 010692 212 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFS-QDTKVLLQEKVYVV 290 (503)
Q Consensus 212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 290 (503)
...+.++. +... ++.. ..++.++++++.|.
T Consensus 192 ~~~d~p~~------r~~~-------------------------------------------~~~~~~~~~~v~~~~~~W~ 222 (417)
T COG2223 192 GMNDVPEH------RASV-------------------------------------------KPQLPAQLKAVFSNKDTWL 222 (417)
T ss_pred HhCCChhh------hccc-------------------------------------------cccchhHHHHHhcCcchHH
Confidence 76442221 1000 0000 33667889999999
Q ss_pred HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692 291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
+.+.++..+..+.++..++|.|++++++.++..+ .++......+.+.++++|+++||+|.+ +........+++.
T Consensus 223 lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~-----rv~~~~f~~~~~~ 297 (417)
T COG2223 223 LSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGR-----RVTLAVFVGMALA 297 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccch-----hHHHHHHHHHHHH
Confidence 9999999999999999999999999999997665 566777788888999999999999988 4544444444433
Q ss_pred HHHHHHh-------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692 370 CLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 442 (503)
Q Consensus 370 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 442 (503)
....... .+.......+.....+.+......+.++...+ +++.|.+.|+.....++ |+..-|...|...+.
T Consensus 298 ~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvfk~Ip~if-~~~~G~v~G~vga~G~l-GGf~lp~~~g~~~~~ 375 (417)
T COG2223 298 AALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVFKMIPVIF-PKETGAVTGIVGAIGGL-GGFFLPLAFGVSLDL 375 (417)
T ss_pred HHHHHccccccccCcchHHHHHHHHHHHHHhccCcchheeechHHH-HhhhhHHHHHHHHhccc-cccchhHHHHHHHHh
Confidence 3333322 23445555555666677777777777777665 45789999999877777 888889999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHH
Q 010692 443 VNNWRKTTLALTSIFFLAAGIWFV 466 (503)
Q Consensus 443 ~g~~~~~~~~~~~~~~~~~~~~~~ 466 (503)
+|++...|+++..+.+++.+....
T Consensus 376 tg~~~~~f~~~~~~~~~a~v~~~~ 399 (417)
T COG2223 376 TGSYTGAFMLLLAFYLVALVLTWA 399 (417)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHH
Confidence 998989999888887777665543
No 32
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=1.5e-34 Score=276.58 Aligned_cols=355 Identities=15% Similarity=0.172 Sum_probs=258.9
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+++|.+..+.|++.+++.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+
T Consensus 19 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 98 (379)
T TIGR00881 19 PYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNGIFQG 98 (379)
T ss_pred HHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhhcc
Confidence 66689999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHH-HHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY-VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~-~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
...+...+++.|++|+++|++++++.+.+..+|..+++ .+++.+.+..+||+.|++.+++.++..++.++..||.++..
T Consensus 99 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (379)
T TIGR00881 99 MGWPPCGRTVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRDSPQSC 178 (379)
T ss_pred ccCCchHHHHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCCCcccc
Confidence 99999999999999999999999999999999999999 57777777889999999999888777777776666543321
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 300 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (503)
..++.++.. .++.++ ..+.++++. +......+.++++|.++...+..++...
T Consensus 179 ~~~~~~~~~--------------~~~~~~----~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (379)
T TIGR00881 179 GLPPAEEMP--------------NEEPDG----DAEKKEEEL----------TKKQIFLQYVLLNKVLWYISLGYVFVYV 230 (379)
T ss_pred ccCccccCc--------------cccccc----ccccccccc----------cchHHHHHHHHhcchHHHHHHHHHHHHH
Confidence 111100000 000000 000000000 0001234567788999888887777777
Q ss_pred HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH--hh
Q 010692 301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC--LS 377 (503)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 377 (503)
....+..+.|.|+++..+.++... .......++.+++.++.+++.||..+++.. ................... ..
T Consensus 231 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 308 (379)
T TIGR00881 231 VRTGILDWSPLYLTQEKGFSKEKASWAFTLYELGGLVGTLLAGWLSDKLFNGRRG--PLAVFFMALIIVSLLVYWLNPAA 308 (379)
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHcchhHHHHHHHHHHHcCCcch--HHHHHHHHHHHHHHHHHhcCcch
Confidence 788888899999988888876544 445667788899999999999986443211 1111111111111111111 12
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHH
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 448 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 448 (503)
+.+......++.+.+.....+.......+..|++.|+++.|+.+...++ |..++|.+.|.+.|..| |+.
T Consensus 309 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~~~~~~g~l~~~~g-~~~ 377 (379)
T TIGR00881 309 NPLMDLICLFALGFLVYGPQMLIGVIASELAPKKAAGTAAGFVGFFAYL-GGILAGLPLGYLADGFG-WAG 377 (379)
T ss_pred hHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhh-hhhhhhhhHHHHHHhhc-ccc
Confidence 2233333334444443344444556778888999999999999988888 88889999999999876 543
No 33
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=1.5e-34 Score=284.91 Aligned_cols=417 Identities=14% Similarity=0.069 Sum_probs=258.2
Q ss_pred ccCCchhHHHHHHhhhcccCCCCCcccccccccc-----cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHH
Q 010692 34 SHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGD-----FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV 108 (503)
Q Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-----~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~ 108 (503)
....+..+..+..+++....+...+. +.++ .+.+..+.+++.+.+.+++.++++++|+++||+|||+++.+
T Consensus 16 ~~~~~~~~~~~~~g~d~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~ 91 (502)
T TIGR00887 16 RAIVIAGVGFFTDSYDLFCISLVTKM----LGYVYYHGKGPLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGM 91 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHhccCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 34444555666677765555555533 2332 34556678999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhH------HHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH
Q 010692 109 GLSVWTFATAGCGSSFD------FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 182 (503)
Q Consensus 109 ~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 182 (503)
+.++..++.++++++++ ++.++++|+++|++.|...+....++.|++|+++|++++++.+....+|.++++.++
T Consensus 92 ~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 92 ELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATKKWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred HHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998865 789999999999999999999999999999999999999999999999999999888
Q ss_pred HhhcC-----------------------cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcc
Q 010692 183 GVVGS-----------------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSE 239 (503)
Q Consensus 183 ~~l~~-----------------------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (503)
..+.. ..+||+.|.+.++++++..+. .+.+||+++....+++.++...+ ...+..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~~ip~~i~~~~-~~~lpESpr~l~~~~~~~~~a~~-~~~~~~ 249 (502)
T TIGR00887 172 LIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFGAVPALLALYF-RLTIPETPRYTADVAKDVEQAAS-DMSAVL 249 (502)
T ss_pred HHHHHHhccccccccccccccccccchhcccHHHHHHHHHHHHHHHHHH-HHhCCCCHHHHHHhCcchHHHHH-HHHHHh
Confidence 65431 237999998888776654444 45669987753221111100000 000000
Q ss_pred cCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh----hh---HHHHHHHHHHHHHHhhhhhccccch
Q 010692 240 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE----KV---YVVNVLGYIAYNFVIGAYSYWGPKA 312 (503)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (503)
..+..++ .++.++..+++ ++.+ .++++++++ +. .+.....++.....+++...|.|.+
T Consensus 250 ~~~~~~~-~~~~~~~~~~~-~~~~-------------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~p~i 314 (502)
T TIGR00887 250 QVKIEAE-PDEVEKASTAV-EVPK-------------ASWSDFFTHFFKWRHGKHLLGTAGSWFLLDIAFYGVNLNQKVI 314 (502)
T ss_pred ccccccC-cccccchhccc-cchh-------------hhHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHccccccHHH
Confidence 0000000 00000000000 0000 122333321 11 1212222333444556777788888
Q ss_pred hhhhcccchhh-------------HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH-hh-
Q 010692 313 GYNIYHMSNAD-------------MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LS- 377 (503)
Q Consensus 313 ~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~- 377 (503)
+++ .|.+... .....+..++.+++.++++++.||+||| ++++.+..+..+...+... ..
T Consensus 315 ~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR-----~~l~~~~~~~~~~~~~l~~~~~~ 388 (502)
T TIGR00887 315 LSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRK-----PIQLMGFFILTVLFFVLGFAYNH 388 (502)
T ss_pred HHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcch-----hHHHHHHHHHHHHHHHHHHHHHh
Confidence 865 3443210 0122334456677889999999999998 5554444433333322221 11
Q ss_pred -hHHHHHHHHHHHHHHHh-hccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh---------hH
Q 010692 378 -SLYGFLALFTVGELLVF-ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---------NW 446 (503)
Q Consensus 378 -~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---------~~ 446 (503)
+........++...+.+ ...+....+..|.+|++.|+++.|+.+...++ +++++|.+.|.+.+..+ ++
T Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 467 (502)
T TIGR00887 389 LSTHGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKA-GAIIGQFGFLYLAQHGDPTKGYPTGIWM 467 (502)
T ss_pred cchhHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhh-HHHHHHHHhhhhhccccccccccccccc
Confidence 11111222222222222 23344555667888889999999999988888 88889999999988431 13
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc-cccccccccc
Q 010692 447 RKTTLALTSIFFLAAGIWFVGIFLK-SIDKFNEDGE 481 (503)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 481 (503)
...+.+++++.+++.+..+ ++| +|+++.||++
T Consensus 468 ~~~~~i~~~~~~~~~i~~~---~lpEt~~~~leei~ 500 (502)
T TIGR00887 468 GHVLEIFALFMFLGILFTL---LIPETKGKSLEELS 500 (502)
T ss_pred hHHHHHHHHHHHHHHHHhe---EeccCCCCCHHhhh
Confidence 3466666666555544332 334 3555555443
No 34
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=7e-34 Score=275.65 Aligned_cols=370 Identities=13% Similarity=0.066 Sum_probs=253.7
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh----hHHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----FDFWSIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~G 137 (503)
|.+++ +|+++++.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++.++. ++++.+++.|++.|
T Consensus 51 p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 129 (438)
T TIGR00712 51 PYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLNG 129 (438)
T ss_pred HHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHH
Confidence 44454 69999999999999999999999999999999999999999999999998887764 56788889999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
++.+...+.....+.|++|+++|++++++.+.+.++|..+++.+.+... ...+||+.|++.++++++..++.+++.||.
T Consensus 130 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~~~ 209 (438)
T TIGR00712 130 WFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMRDT 209 (438)
T ss_pred HHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhccCC
Confidence 9999888888999999999999999999999999999999988776544 456999999999998888777777776664
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
++....++.++.. . +... + .. ++.+++. ..++ ...+.+++++.+|...+..+
T Consensus 210 ~~~~~~~~~~~~~------~---~~~~-----~-~~---~~~~~~~--------~~~~--~~~~~~~~~~~~~~~~~~~~ 261 (438)
T TIGR00712 210 PQSCGLPPIEEYR------N---DYPD-----D-YN---EKAEQEL--------TAKE--IFMQYVLPNKLLWYIAIANV 261 (438)
T ss_pred HHhcCCCCchhcc------c---cccc-----c-cc---ccccccc--------chHH--HHHHHHccCchHHHHHHHHH
Confidence 3221100000000 0 0000 0 00 0000000 0000 11234678899998877777
Q ss_pred HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH--HHHHHHHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF--LGAISCLTA 373 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 373 (503)
+.....+++..|.|.|+++..+.++... ....+..+.++++.+++|++.||+++++ +....... ......+..
T Consensus 262 ~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~~~ 337 (438)
T TIGR00712 262 FVYLLRYGVLDWSPTYLKEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFKGN----RGATGVFFMTLVTIAVIVY 337 (438)
T ss_pred HHHHHHHHHHHhHHHHHHHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccCc----ccHHHHHHHHHHHHHHHHH
Confidence 7777777888899999998878776544 4456677788999999999999996542 11111111 111111111
Q ss_pred HHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692 374 FCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 451 (503)
Q Consensus 374 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 451 (503)
... .+.+......+..+.+.............+..|++.||++.|+.+...+..|.+++|.+.|.+.|..| |...++
T Consensus 338 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g-~~~~~~ 416 (438)
T TIGR00712 338 WMNPAGNPLVDMICMIVIGFLIYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFG-WDGGFM 416 (438)
T ss_pred HhcCCCchHHHHHHHHHHHHHHccHHHHHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhcc-chHHHH
Confidence 111 12222222222222222111112223456788889999999999888777345679999999999877 777887
Q ss_pred HHHHHHHHHHHHHH
Q 010692 452 ALTSIFFLAAGIWF 465 (503)
Q Consensus 452 ~~~~~~~~~~~~~~ 465 (503)
+..++.+++.+..+
T Consensus 417 ~~~~~~~~~~~~~~ 430 (438)
T TIGR00712 417 VMIGGSILAVILLI 430 (438)
T ss_pred HHHHHHHHHHHHHH
Confidence 77666555555444
No 35
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.8e-33 Score=271.73 Aligned_cols=348 Identities=14% Similarity=0.135 Sum_probs=256.7
Q ss_pred cccccccCCCccc-----hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQ-----DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 62 ~~i~~~~~~s~~~-----~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
|.+.+++|.+..+ .|++.+++.++..++++++|+++||+|||+++..+.++.+++.++++++++++.+++.|++.
T Consensus 38 ~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (408)
T PRK09874 38 PLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRALL 117 (408)
T ss_pred HHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 6667889988665 48899999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
|++.+ ..+....++.|++|+++|++++++...+..+|..++|.+++.+.+..+||+.|++.+++.++..+..++..||.
T Consensus 118 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (408)
T PRK09874 118 GLLGG-FVPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCIREN 196 (408)
T ss_pred HHhhh-hHHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 99865 56778889999999999999999999999999999999999999888999999999988777776666665542
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHH-HHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV-LGY 295 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 295 (503)
.+.. ++++.. . .++..+.+++++++... ...
T Consensus 197 ~~~~---~~~~~~-----------------------------------------~----~~~~~~~~~~~~~~~~~~~~~ 228 (408)
T PRK09874 197 FQPV---SKKEML-----------------------------------------H----MREVVTSLKNPKLVLSLFVTT 228 (408)
T ss_pred cccc---cchhhh-----------------------------------------H----HHHHHHhCcCCchHHHHHHHH
Confidence 2110 000000 0 01122334555554432 222
Q ss_pred HHHHHHhhhhhccccchhhhhcccchh-h---HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNA-D---MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 371 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (503)
............+.|.|..+..+.... . ..+..+..++.+++.+..|++.||+++| +.+...........+
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~~~~~~~ 303 (408)
T PRK09874 229 LIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALLSAPRLGKLGDRIGPE-----KILITALIFSVLLLI 303 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-----hhHHHHHHHHHHHHH
Confidence 333334444556667777765443221 1 1233445667778888899999999988 555555444444444
Q ss_pred HHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692 372 TAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 451 (503)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 451 (503)
.....++.+...+..++.+++.+...+.......+..+++.+|+..++.+...+. |..++|.+.|.+.+..| |+..|.
T Consensus 304 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~~gp~~~G~l~~~~g-~~~~f~ 381 (408)
T PRK09874 304 PMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDI-GNVTGPLMGAAISANYG-FRAVFL 381 (408)
T ss_pred HHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHH-HHHhhHHHHHHHHhhcc-hhHHHH
Confidence 3333445555555556667777777777777778888889999999999888777 89999999999999877 778888
Q ss_pred HHHHHHHHHHHHHH
Q 010692 452 ALTSIFFLAAGIWF 465 (503)
Q Consensus 452 ~~~~~~~~~~~~~~ 465 (503)
+.+++.+++.+...
T Consensus 382 ~~~~~~l~~~~~~~ 395 (408)
T PRK09874 382 VTAGVVLFNAVYSW 395 (408)
T ss_pred HHHHHHHHHHHHHH
Confidence 88777666655444
No 36
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=3.6e-34 Score=283.78 Aligned_cols=377 Identities=14% Similarity=0.114 Sum_probs=255.5
Q ss_pred cccccccccCCC---ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 60 WFTPKRGDFKLN---NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 60 ~~~~i~~~~~~s---~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
..+.+.+|+|++ ..+.+++.+++.++..+++++.|+++||+|||++++++.++.+++.+++++++|++.++++|++.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 190 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV 190 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 347779999998 88999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
|++.+...+...+++.|++|+++|+++.++.+.+..+|.++++.++..+. +||+.|++.+++.++..+.. ++.||+
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~---~wr~~~~~~~i~~~~~~~~~-~~~~es 266 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIP---DWRWLQLAVSLPTFLFFLLS-WFVPES 266 (505)
T ss_pred HhhccchHHHHHHHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhh---HHHHHHHHHHHHHHHHHHHH-HhcCCC
Confidence 99999999999999999999999999999999999999999999987765 49999999998877766655 556776
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
++....+++.++..+ ..++..+.+..+...+......+++..+++ ...++++++++|.++...+...
T Consensus 267 p~~l~~~~~~~~a~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~~~~~~~~~~~~ 333 (505)
T TIGR00898 267 PRWLISQGRIEEALK--ILQRIAKINGKKLPAEVLSLSLEKDLSSSK-----------KQYSFLDLFRTPNLRKTTLCLM 333 (505)
T ss_pred hHHHHHCCCHHHHHH--HHHHHHHHcCCCCCHHHHhhhhhhhhhhcc-----------CCCcHHHHhCChHHHHHHHHHH
Confidence 543211111110000 000000000000000000000000000000 0124567888888777665544
Q ss_pred HHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 376 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
...+......+..+.+..+ .+.+. .....+..+..+++.++.+++.||+||| +.+....++..+..++....
T Consensus 334 ~~~~~~~~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~i~~~~~~~~l~dr~grr-----~~~~~~~~~~~~~~l~~~~~ 405 (505)
T TIGR00898 334 MLWFTTAFSYYGLVLDLGN-LGGNI--YLDLFISGLVELPAKLITLLLIDRLGRR-----YTMAASLLLAGVALLLLLFV 405 (505)
T ss_pred HHHHHHHHHHHHHhccccc-cCCCh--HHHHHHHHHHHHHHHHHHHHHHHHhCCH-----HHHHHHHHHHHHHHHHHHHc
Confidence 3333322222222222222 22231 2223345567788899999999999998 66655555555444444433
Q ss_pred hhH--HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHH
Q 010692 377 SSL--YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALT 454 (503)
Q Consensus 377 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~ 454 (503)
++. +......++.+++....++..+.+..|.+|++.|+++.|+.+....+ |++++|.+.+ +.+ .+ +..++.+.+
T Consensus 406 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~i-g~~i~p~i~~-~~~-~~-~~~~~~~~~ 481 (505)
T TIGR00898 406 PVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVRNLGVGVCSTMARV-GSIISPFLVY-LGE-KW-LFLPLVLFG 481 (505)
T ss_pred CCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHHhhhHhHHHHHHHH-HHHHHhHHHH-HHH-HH-HhhHHHHHH
Confidence 322 33444445555555666677788888999999999999999988887 8899998888 433 33 335666666
Q ss_pred HHHHHHHHHHH
Q 010692 455 SIFFLAAGIWF 465 (503)
Q Consensus 455 ~~~~~~~~~~~ 465 (503)
++.+++.++.+
T Consensus 482 ~~~~~~~~~~~ 492 (505)
T TIGR00898 482 GLALLAGILTL 492 (505)
T ss_pred HHHHHHHHHHH
Confidence 65555544444
No 37
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=7e-35 Score=288.19 Aligned_cols=391 Identities=14% Similarity=0.122 Sum_probs=250.3
Q ss_pred cccccccccccCCC--------ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh---hHH
Q 010692 58 PSWFTPKRGDFKLN--------NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDF 126 (503)
Q Consensus 58 ~~~~~~i~~~~~~s--------~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~ 126 (503)
...++.+..+++.+ ..+.+++.+++.++..++++++|+++||+|||++++++.++++++.+++.++ .++
T Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (481)
T TIGR00879 48 GGALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSV 127 (481)
T ss_pred hhhhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccch
Confidence 33336667777766 7899999999999999999999999999999999999999999999998554 456
Q ss_pred HHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH---HhhcCcchhHHHHHHHHHHHH
Q 010692 127 WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG---GVVGSHLNWRYAFWGEAILML 203 (503)
Q Consensus 127 ~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~---~~l~~~~gwr~~f~~~~~~~~ 203 (503)
+.++++|+++|++.+...+...+++.|++|+++|++++++.+.+..+|..+++.++ ....+..+||+.|++.++..+
T Consensus 128 ~~~~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~ 207 (481)
T TIGR00879 128 EMLIVGRVLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAG 207 (481)
T ss_pred HHHHHHHHHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999999999999999999 777677899999999666554
Q ss_pred HHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692 204 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 283 (503)
Q Consensus 204 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (503)
+.. +..++.||+++....+++.+... +...+....+. ......+.......+..... +..+..+..+.+..
T Consensus 208 ~~~-~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 278 (481)
T TIGR00879 208 LLF-LGLFFLPESPRWLVGKGRVEEAR--KSLARLRGTSG---EDKELLDELELIDIKRSIEK---RSVQPSWGSLFSST 278 (481)
T ss_pred HHH-HHHhcCCCChHHHHHcCChHHHH--HHHHHHhCCCC---CcHHHHHHHHHHHHHHHHHH---hhccccHHHHHhcC
Confidence 444 44455566432211111110000 00000000000 00000000000000000000 00000012222222
Q ss_pred ---hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692 284 ---QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 359 (503)
Q Consensus 284 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (503)
+.+.++...+..+........+.++.|.+..+ .+.+.... .......++.+++.++.+++.||+++| +.+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~-----~~~ 352 (481)
T TIGR00879 279 RRIRRRLFLGVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRR-----PLL 352 (481)
T ss_pred chhHHHHHHHHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-----HHH
Confidence 23444444444444444455566677777655 46654333 455666778889999999999999988 555
Q ss_pred HHHHHHHHHHHHHHHH----hhh------HHHHHHHHHHHHHHHhhcc-chhhHHhhcccCCCCchhHHHHHHHHHhhcc
Q 010692 360 SAATFLGAISCLTAFC----LSS------LYGFLALFTVGELLVFATQ-APVNYVCLHSVKPSLRALSMAISTVSIHIFG 428 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~----~~~------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g 428 (503)
..+..+..+..+.... ..+ .+..+....+...+.+... +....+..+.+|++.|+++.|+.+...++ |
T Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~l-g 431 (481)
T TIGR00879 353 LIGAAGMAICLFVLGILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWL-A 431 (481)
T ss_pred HHHHHHHHHHHHHHHHHhhcccCCcccchhHHHHHHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHH-H
Confidence 4444433333332221 111 2222333333333333333 34445557888889999999999988888 8
Q ss_pred cccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 429 DVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 429 ~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
.+++|.+.+++.+..+ +...|++.+++.+++.++.+
T Consensus 432 ~~i~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~i~~~ 467 (481)
T TIGR00879 432 NFIVGFLFPTMLESIG-VGGVFIFFGGLNVLGLIFVY 467 (481)
T ss_pred HHHHHHHHHHHHHhcC-ccceehhHHHHHHHHHHHHh
Confidence 8889999999998766 66777777666555555443
No 38
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=1.6e-34 Score=284.81 Aligned_cols=411 Identities=14% Similarity=0.074 Sum_probs=248.3
Q ss_pred hhHHHHHHhhhcccCCCCCcccccccccc--------cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHH
Q 010692 39 PLAEAEMATRSLSEDSPPTPSWFTPKRGD--------FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGL 110 (503)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~--------~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~ 110 (503)
..+..+...++.+..+... +.++++ ++.++.+.+++.+++.++..++++++|+++||+|||++++++.
T Consensus 17 ~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~ 92 (479)
T PRK10077 17 ATLGGLLFGYDTAVISGTV----ESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAA 92 (479)
T ss_pred HHHHHHhcCcccceehHhH----HHHHHHhcccccccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHH
Confidence 3445555666544444443 334444 4889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhhh------------hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHH
Q 010692 111 SVWTFATAGCGSS------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 178 (503)
Q Consensus 111 ~~~~~~~~~~~~~------------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 178 (503)
++++++.++++++ ++++.++++|+++|++.|...+...++++|++|+++|++++++.+.+..+|.+++
T Consensus 93 ~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~ 172 (479)
T PRK10077 93 VLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIGGIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVV 172 (479)
T ss_pred HHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHHhhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHH
Confidence 9999998888763 3357788999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccc
Q 010692 179 YVYGGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSED 250 (503)
Q Consensus 179 ~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (503)
+.+++.+. +.+|||+.|++.+++.++..+. .++.||++++...+++.++. + ...++....++..+.
T Consensus 173 ~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~~~-~~~l~~s~~~l~~~~~~~~~--~---~~~~~~~~~~~~~~~ 246 (479)
T PRK10077 173 YFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFLML-LYFVPETPRYLMSRGKQEQA--E---GILRKIMGNTLATQA 246 (479)
T ss_pred HHHHHHHhccCcccccccCChHHHHHHHHHHHHHHHHH-HHcCCCCcHHHHHcCCHHHH--H---HHHHHHcCChhHHHH
Confidence 88876553 4569999999988877776544 45567754321100000000 0 000000000000000
Q ss_pred cchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH---HHHHHHHHHHHhhhhhccccchhhhhcccchhh-HHH
Q 010692 251 ISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV---NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMF 326 (503)
Q Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 326 (503)
.++..+..+++. ...+..+....... .....+......+...++.|.+..+ .+.+... ...
T Consensus 247 ~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~i~~~-~g~~~~~~~~~ 311 (479)
T PRK10077 247 LQEIKHSLDHGR--------------KTGGKLLMFGVGVIVIGVMLSVFQQFVGINVVLYYAPEIFKT-LGASTDIALLQ 311 (479)
T ss_pred HHHHHHHHHHhh--------------hhhhhhcchhHHHHHHHHHHHHHHHHhChhHHHHHHHHHHHH-cCCCCchHHHH
Confidence 000000000000 00001111000000 0111111122233445566776655 4555432 334
Q ss_pred HHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh--hhH--HHHHHHHHHHHHHHhhcc-chhh
Q 010692 327 GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--SSL--YGFLALFTVGELLVFATQ-APVN 401 (503)
Q Consensus 327 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~-~~~~ 401 (503)
.....+..+++.+++++++||++|| ++++.+..+.++..+..... .+. .......++.+.+.+... +...
T Consensus 312 ~~~~~~~~~i~~~~~g~l~dr~g~r-----~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (479)
T PRK10077 312 TIIVGVINLTFTVLAIMTVDKFGRK-----PLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYVAAFAMSWGPVCW 386 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCh-----HHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHHHHHhccccchhH
Confidence 4556677888999999999999998 66655555444443333221 111 122222333333333333 4556
Q ss_pred HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH------hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc-cc
Q 010692 402 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ------DHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS-ID 474 (503)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~------~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 474 (503)
.++.|.+|++.|+++.|+.+...++ |.++++.+.+.+. |..+ +...+++.++..+++.++... +.++ |+
T Consensus 387 ~~~~e~~p~~~r~~~~g~~~~~~~~-g~~~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~e~~~ 462 (479)
T PRK10077 387 VLLSEIFPNAIRGKALAIAVAAQWI-ANYFVSWTFPMMDKNSWLVAHFH-NGFSYWIYGCMGVLAALFMWK--FVPETKG 462 (479)
T ss_pred HHhHhhCChhHHHHHHHHHHHHHHH-HHHHHHHHhHHHHhccchhhhcc-CccHHHHHHHHHHHHHHHHHh--ccccCCC
Confidence 7888888889999999999888777 7777766665444 4444 345566655554444333321 2343 55
Q ss_pred ccccccccc
Q 010692 475 KFNEDGENQ 483 (503)
Q Consensus 475 ~~~~~~~~~ 483 (503)
+..||.++.
T Consensus 463 ~~~~~~~~~ 471 (479)
T PRK10077 463 KTLEEMEAL 471 (479)
T ss_pred CCHHHHHHH
Confidence 544444433
No 39
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=5.4e-34 Score=275.30 Aligned_cols=344 Identities=10% Similarity=0.002 Sum_probs=251.4
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLV 136 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~ 136 (503)
|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+..+.+++.+..+. .++++.+++.|+++
T Consensus 41 ~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 120 (417)
T PRK10489 41 PVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWD 120 (417)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHH
Confidence 5556888889999999999999999999999999999999999999988888877665542 56789999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
|++.+...+...+++.|++|+++|+++.++.....++|..+||.+++.+.+..+|++.|++.++..++..++. +..|+.
T Consensus 121 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~ 199 (417)
T PRK10489 121 GFFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPL-LRLPAL 199 (417)
T ss_pred HHHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhCCCC
Confidence 9999988888999999999999999999999999999999999999999888899999998887766555443 333442
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
+++ ++++. +..++..+.++.++++|.++...+..+
T Consensus 200 ~~~----~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (417)
T PRK10489 200 PPP----PQPRE-----------------------------------------HPLRSLLAGFRFLLASPVVGGIALLGG 234 (417)
T ss_pred CCC----Ccccc-----------------------------------------cchHHHHHHHHHHHcChHHHHHHHHHH
Confidence 111 00000 000011133456677777766555443
Q ss_pred HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 375 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (503)
+.. .......+.|.|.++..+.++... .+.....++.+++.++.+++.||.+++ +.+..+..+.....+....
T Consensus 235 ~~~-~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~-----~~l~~~~~~~~~~~~~~~~ 308 (417)
T PRK10489 235 LLT-MASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPG-----LLMLLSTLGSFLAVGLFGL 308 (417)
T ss_pred HHH-HHHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcc-----hHHHHHHHHHHHHHHHHHc
Confidence 332 234566788999988777775443 444566788888999999999986554 4444444443333333333
Q ss_pred hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHH
Q 010692 376 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 455 (503)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 455 (503)
.++.+...+..++.+++.+...+....++.+..|++.||+++|+.+...+. |..++|.+.|++.|..| +...+...++
T Consensus 309 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~~g~~l~G~l~~~~g-~~~~~~~~~~ 386 (417)
T PRK10489 309 MPMWILAVLCLALFGYLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVT-GDAIGAALLGGLGAMMT-PVASASASGF 386 (417)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhh-hHhHHHHHHHHHHHHhc-hhhHHHHHHH
Confidence 444444455555566655555555667778888889999999999887777 99999999999999887 4455555554
Q ss_pred HHHH
Q 010692 456 IFFL 459 (503)
Q Consensus 456 ~~~~ 459 (503)
+.++
T Consensus 387 ~~~~ 390 (417)
T PRK10489 387 GLLI 390 (417)
T ss_pred HHHH
Confidence 4433
No 40
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=4.1e-33 Score=267.36 Aligned_cols=341 Identities=10% Similarity=0.037 Sum_probs=244.6
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|++.++++.+..+.++..+++.+++.++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++|++.+
T Consensus 40 ~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~~~ 119 (413)
T PRK15403 40 INVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQGTSIC 119 (413)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 77899999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+...+++.|++|+++|++++++......+|..+||++++.+.++.|||+.|++.+++.++..+..++..||+.+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~~~~-- 197 (413)
T PRK15403 120 FIATVGYVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPETVKR-- 197 (413)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCCccc--
Confidence 777777888999999999999999999999999999999999999888999999999988877766655556664221
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
++++.. .+...++++.+++||.++...+..++....
T Consensus 198 --~~~~~~------------------------------------------~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~ 233 (413)
T PRK15403 198 --GAVPFS------------------------------------------AKSVLRDFRNVFRNRLFLTGAATLSLSYIP 233 (413)
T ss_pred --cCCCCC------------------------------------------hHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 000000 001124567888999999988877777777
Q ss_pred hhhhhccccchhhhhcccchhhHHH-HHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHH--HHHHHHHHHHH--HHh
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADMMF-GGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA--TFLGAISCLTA--FCL 376 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~~~ 376 (503)
...+..+.|.++++.++.++....+ ......+.+++..+.+.+.++..+++ ...... ...+....... ...
T Consensus 234 ~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~~~~~~~~~~~~----~~~~~~~~~~ig~~l~~~~~~~~~ 309 (413)
T PRK15403 234 MMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIVARFVKDPTEPR----FIWRAVPIQLVGLALLIVGNLLWP 309 (413)
T ss_pred HHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchh----HHHHHHHHHHHHHHHHHHHHHHcc
Confidence 7778888999999988888765533 33345566666666666554433321 111111 11111111111 111
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
++.+..+...++.+.+.+...+........ -.+..+|++.++.+..... +...++...|++.+... ..++....++
T Consensus 310 ~~~~~~~~~~~l~~~G~~~~~p~~~~~al~-~~~~~~G~a~a~~~~~~~~-~~~~~~~~~g~~~~~~~--~~~~~~~~~~ 385 (413)
T PRK15403 310 HVWLWSVLGTSLYAFGIGLIFPTLFRFTLF-SNNLPKGTVSASLNMVILM-VMAVSVEIGRWLWFNGG--RLPFHLLAVV 385 (413)
T ss_pred ccHHHHHHHHHHHHHHHHHHhHHHHHHHhc-cCCCCCcHHHHHHHHHHHH-HHHHHHHHHHHHHHcCC--chHHHHHHHH
Confidence 222223445555566666666655543321 1223479999998877777 56667888888877633 3445444444
No 41
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=7.9e-34 Score=274.95 Aligned_cols=353 Identities=12% Similarity=0.066 Sum_probs=233.8
Q ss_pred CCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhH-HHHH-----HHHHHHHHhHHHHhhhhcCCchhHHHH
Q 010692 36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVL-SSAF-----MVGLLVASPIFASLAKSHNPFRLIGVG 109 (503)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~-~s~~-----~~~~~~~~~~~g~l~dr~Grr~~l~~~ 109 (503)
....++..+++.+|....+... |.+.+|++.++.+.+.+ .+.. .++..+++++.|+++||+|||++++.+
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~----~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~ 92 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYA----TAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVT 92 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHH
Confidence 3444556666666544555444 66689999988876544 3332 223347899999999999999999999
Q ss_pred HHHHHHHHHHhhhhhHHHH--------HHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHH
Q 010692 110 LSVWTFATAGCGSSFDFWS--------IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 181 (503)
Q Consensus 110 ~~~~~~~~~~~~~~~~~~~--------l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 181 (503)
.+++++++++++++++++. ++++|+++|++.+...+....+++|++|+++|++++++...+.++|..+++.+
T Consensus 93 ~~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 93 LSIMASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999874 68899999999999999899999999999999999999999988888888888
Q ss_pred HHhhc--------CcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccch
Q 010692 182 GGVVG--------SHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD 253 (503)
Q Consensus 182 ~~~l~--------~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (503)
++.+. +.+|||++|++..+... .........||. ++.... +
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~~~~-~~~~~~~~~~e~---------~~~~~~-~-------------------- 221 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCLIVP-FIFLIRRSLEET---------EEFLAR-K-------------------- 221 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHHHHH-HHHHHHHhcCCC---------HHHHHh-h--------------------
Confidence 77652 46799999997544321 111111111110 000000 0
Q ss_pred hhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHH-HHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhh
Q 010692 254 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN-VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTI 331 (503)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 331 (503)
++. ..+ +.++...+++..+.. .+..++.....+.+..|.|.|+++..|.+.... ....+..
T Consensus 222 ------~~~--------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~~~~~~~~~~~~ 284 (434)
T PRK15075 222 ------HRP--------SMR---EIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSAADSLLVTLCVG 284 (434)
T ss_pred ------hcc--------ccc---cHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 000 000 112223344444433 222334455566778899999998778876544 4445667
Q ss_pred hhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH-HH-HHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692 332 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL-TA-FCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHS 407 (503)
Q Consensus 332 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (503)
++.+++.++.|+++||++|| +.......+...... .. ... .+.........+.+++.+...+.......|.
T Consensus 285 ~~~~~~~~~~g~l~Dr~g~r-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~e~ 359 (434)
T PRK15075 285 VSNFIWLPIGGALSDRIGRR-----PVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMVVALTEV 359 (434)
T ss_pred HHHHHHHHHHHHHHHHhcch-----HHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 78889999999999999988 544443332222111 11 111 1121222222333344444445556677899
Q ss_pred cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh
Q 010692 408 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 445 (503)
Q Consensus 408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 445 (503)
+|++.|+++.|+.+.....+++.++|.+.|++.|..|.
T Consensus 360 ~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~ 397 (434)
T PRK15075 360 MPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGD 397 (434)
T ss_pred CCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCC
Confidence 99999999999976666654566799999999998873
No 42
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1e-33 Score=277.99 Aligned_cols=362 Identities=12% Similarity=0.101 Sum_probs=259.5
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+++|.+..+.+++.+.+.++..++.+++|+++||+|||++++.+.++.+++.++++++++++.++++|+++|++.+
T Consensus 34 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~ 113 (471)
T PRK10504 34 PSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGVGGA 113 (471)
T ss_pred HHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHhhhH
Confidence 66789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+...+++.|++|+++|+++.++.....++|..+||.+++.+.++.|||+.|++......+..++.....|+.....
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~~~- 192 (471)
T PRK10504 114 MMVPVGRLTVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYTMQT- 192 (471)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCccccC-
Confidence 9999999999999999999999999999999999999999999999999999999988777766666655555422110
Q ss_pred ccccccccccccc-------ccCcccCCCCCccccccc-----------hhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692 222 PAESGKAQVVASV-------SEGSEASNLNDHVSEDIS-----------DQASERSIKSIGESRFLNQLSQFSQDTKVLL 283 (503)
Q Consensus 222 ~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (503)
++.+....... ....+..+.......... ....++++.. +...+. +++
T Consensus 193 --~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~-~l~ 258 (471)
T PRK10504 193 --RRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNN-----------RALFSL-KLF 258 (471)
T ss_pred --CCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCC-----------CCccCH-HHh
Confidence 00000000000 000000000000000000 0000000000 000122 478
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHH
Q 010692 284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 362 (503)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 362 (503)
+||.++......++..........+.|.|++...+.++... .......++.+++.++.+++.||+++| +.+..+
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~-----~~~~~~ 333 (471)
T PRK10504 259 RTRTFSLGLAGSFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYR-----RVLVAT 333 (471)
T ss_pred cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCch-----HHHHHH
Confidence 89999888877777777776777788999887777776544 333445566677778899999999988 666555
Q ss_pred HHHHHHHHHHHHHh---hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692 363 TFLGAISCLTAFCL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 363 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 439 (503)
..+..+........ .+.+......++.+.+.+...++......+.+|++.++.+.|+.++.... |..+|+.+.|.+
T Consensus 334 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~~ig~~i~g~l 412 (471)
T PRK10504 334 TLGLALVSLLFMLVALLGWYYLLPFVLFLQGMVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQL-SMSIGVTIAGLL 412 (471)
T ss_pred HHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHH-HHHHHHHHHHHH
Confidence 54444333332222 22222233344455666666777788888889999999999999888888 989999999999
Q ss_pred Hhhhh
Q 010692 440 QDHVN 444 (503)
Q Consensus 440 ~~~~g 444 (503)
.+..|
T Consensus 413 l~~~g 417 (471)
T PRK10504 413 LGLFG 417 (471)
T ss_pred HHHhh
Confidence 88765
No 43
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=4.1e-33 Score=267.16 Aligned_cols=327 Identities=16% Similarity=0.169 Sum_probs=249.5
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+++|.++.+.+++.+++.++..+++++.|++.||+|||+++..+.++.+++.++++++++++.+++.|++.|++.+
T Consensus 29 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 108 (385)
T TIGR00710 29 PEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAFGAS 108 (385)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHcchh
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+...+++.|++|+++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..+..++..||.++..
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 187 (385)
T TIGR00710 109 AGSVISQALVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETLPYE- 187 (385)
T ss_pred HHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCCCCc-
Confidence 9999999999999999999999999999999999999999999998889999999998887777776666655532110
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
+++.. +...+++++.+++|.++...+........
T Consensus 188 ---~~~~~-------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (385)
T TIGR00710 188 ---ARIQI-------------------------------------------STYFETFLLLLKSKMFWGYALIYGASFGG 221 (385)
T ss_pred ---ccCCH-------------------------------------------HHHHHHHHHHHcCchhHHHHHHHHHHHHH
Confidence 00000 00013456677888888877766666666
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---- 376 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 376 (503)
......+.|.++++..+.++... .+.....++.+++.++.+++.||+++| +.+.....+..+........
T Consensus 222 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 296 (385)
T TIGR00710 222 FFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGRFIKKWGAK-----SLLRMGLILFAVSAVLLEITAILG 296 (385)
T ss_pred HHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77777888999888788876554 444566788899999999999999987 44433333322222222111
Q ss_pred -hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692 377 -SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 442 (503)
Q Consensus 377 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 442 (503)
..........++.+.+.+...+.......+.. |+.++++.++.+......|.+.+| +.+.+.+.
T Consensus 297 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~i~~~-~~~~~~~~ 361 (385)
T TIGR00710 297 LGSWAMIIGPMMFVGIGNSMISSIAMAYALEDF-PHVAGTASALFGTLRLVLGAIVGY-LVSLIHGN 361 (385)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhccC-cccchHHHHHHHHHHHHHHHHHHH-HHHhcccc
Confidence 12223333344455555666666666666665 467999999998887775666555 55555443
No 44
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=4.5e-33 Score=265.89 Aligned_cols=344 Identities=10% Similarity=0.062 Sum_probs=248.6
Q ss_pred cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHH-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692 64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~ 142 (503)
+++++|.|+.+.|++.+++.+...+.+++.|+++||+||||.++ .+..+.+++.+++++++|++.+++.|+++|.+.+.
T Consensus 24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 103 (375)
T TIGR00899 24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAST 103 (375)
T ss_pred HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhh
Confidence 47899999999999999999999999999999999999988755 45666677788889999999999999999988888
Q ss_pred hhhchhhhhhccCCCCCchhH--HHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 143 FISLAAPFIDDNAPVPQKTAW--LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~~r~~~--~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
..|...+++.|+.|+++|++. .+....+.++|.++||++++.+.+.+|||+.|++.+++.++..++.++..||.+++.
T Consensus 104 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (375)
T TIGR00899 104 ANPQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRGA 183 (375)
T ss_pred hHHHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccCc
Confidence 888888899999887777654 588888899999999999999998899999999999887777777666666632210
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 300 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (503)
. ++++ . .+.++.++++.++......++...
T Consensus 184 ~--~~~~-~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~ 213 (375)
T TIGR00899 184 P--GALT-R-----------------------------------------------LEVRGLLASRDTRLLFVACTLMWG 213 (375)
T ss_pred c--cccC-c-----------------------------------------------chhhhhhcCcchHHHHHHHHHHHH
Confidence 0 0000 0 011223455555554444444444
Q ss_pred HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692 301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 379 (503)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (503)
.......+.|.++++..+.++... ..........+++.++.+++.||+++| +.+....+............++.
T Consensus 214 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~ 288 (375)
T TIGR00899 214 CNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKR-----RLMLLAALAGVAFYTGLAADNSL 288 (375)
T ss_pred HHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcch-----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556677888888778776544 333344455677788999999999988 55544444433333333333444
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 459 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 459 (503)
+.......+.+++.+...+.......+..| ++++++.++.+...+. |..++|.+.|.+.|..| ++..+.+.+++.++
T Consensus 289 ~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~g~~~~g~~~~~~g-~~~~~~~~~~~~~~ 365 (375)
T TIGR00899 289 WALLMLQLLNAIFIGILAGIGMLYFQDLMP-GRAGAATTLYTNTGRV-GWIIAGSVGGILAERWS-YHAVYWFAIVMLIV 365 (375)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCc-chhhHHHHHHHHHHHH-HHHHHHHHHHHHHHhcc-chhHHHHHHHHHHH
Confidence 544444555555555555555566666554 5577999999888887 88999999999999876 77778777766665
Q ss_pred HHHHHH
Q 010692 460 AAGIWF 465 (503)
Q Consensus 460 ~~~~~~ 465 (503)
+.++..
T Consensus 366 ~~~~~~ 371 (375)
T TIGR00899 366 ALFCLL 371 (375)
T ss_pred HHHHHh
Confidence 555443
No 45
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=1.2e-33 Score=279.77 Aligned_cols=370 Identities=13% Similarity=0.123 Sum_probs=241.4
Q ss_pred cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692 60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139 (503)
Q Consensus 60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 139 (503)
.+|.+.+++|+++.+.+++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.++.++++|++.+++.|++.|++
T Consensus 42 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 121 (496)
T PRK03893 42 VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMG 121 (496)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 33777899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
.+...+....++.|++|+++|++++++...+..+|..+++.+++.+.+.++||+.|++..+..+ ..+......||..+.
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~-~~~~~~~~~p~~~~~ 200 (496)
T PRK03893 122 MAGEYGSSATYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPII-FALWLRKNLPEAEDW 200 (496)
T ss_pred HHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHH-HHHHHHHhCCCchhh
Confidence 9999999999999999999999999999999999999999999999999999999987544332 222222222432111
Q ss_pred CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhh-------hhhhchH-H--------------
Q 010692 220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL-------NQLSQFS-Q-------------- 277 (503)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~-~-------------- 277 (503)
..++++... .++..+.....+++........ ....... .
T Consensus 201 ~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (496)
T PRK03893 201 KEKHAGKAP-------------------VRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAI 261 (496)
T ss_pred hhhcccccc-------------------chhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 000000000 0000000000000000000000 0000000 0
Q ss_pred --HH-HH--HhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhccccc
Q 010692 278 --DT-KV--LLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT 351 (503)
Q Consensus 278 --~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (503)
.. .+ ..+.+.........+...........++|.|+++..+.+.... .+.....++.+++.++.|++.||+++|
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~ 341 (496)
T PRK03893 262 FISFMVQSSGKRWPTGVMLMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTR 341 (496)
T ss_pred HHHHHHHhcccchhHHHHHHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 00 00 0001111111111111111222345688999987778876544 555677788899999999999999988
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccc
Q 010692 352 ISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD 429 (503)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~ 429 (503)
+.+..+..+..+..+...... +.+......++.+.......+....++.+.+|++.|++++|+.+...++ |.
T Consensus 342 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-g~ 415 (496)
T PRK03893 342 -----KAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQMLGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGAL-GG 415 (496)
T ss_pred -----HHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHhcccchhhHHHHHhhCCHHHhhcccchhhhhhhH-HH
Confidence 555544443333332222221 2222222222222233333455667778888889999999999888877 88
Q ss_pred ccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 430 VPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 430 ~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
.++|.+.|.+.|..| +...+...+..
T Consensus 416 ~lgp~l~g~l~~~~g-~~~~~~~~~~~ 441 (496)
T PRK03893 416 ALAPILGALIAQRLD-LGTALASLSFS 441 (496)
T ss_pred HHHHHHHHHHhccCC-hHHHHHHHHHH
Confidence 889999999999887 65555544443
No 46
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=1.7e-32 Score=263.15 Aligned_cols=350 Identities=13% Similarity=0.150 Sum_probs=250.6
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---h-hhHHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---S-SFDFWSIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~G 137 (503)
+++.+|+|.++++.|++.+.+.+++.+++++.|++.||+|||+++..+..+.+++.+++. + .++++.+++.|+++|
T Consensus 37 ~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~G 116 (402)
T TIGR00897 37 SPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIRG 116 (402)
T ss_pred HHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHH
Confidence 555688999999999999999999999999999999999999999999999998877653 3 357889999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHH-HHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGV-ALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~-~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
++.+...+...+.+.+++|+++|++++|+.+.+.++|. +++|++++.+.+.+||+..++......++..++..++.++.
T Consensus 117 ~g~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (402)
T TIGR00897 117 LGYPLFAYSFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNKDI 196 (402)
T ss_pred cchHHHHhHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccCCC
Confidence 99988888888889999999999999999999999997 68999999998888977666655444333333333433331
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
++ +++.+.. + +.++..+.++.++++|.++...+..+
T Consensus 197 ~~----~~~~~~~-------------------~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (402)
T TIGR00897 197 FT----PQHMQTR-------------------E---------------------KFSELGKAATILFTNPNVLLGGMVRI 232 (402)
T ss_pred CC----cccccCC-------------------c---------------------chhhHHHHHHHHHcChhHHHHHHHHH
Confidence 10 0000000 0 00001134557788999988877777
Q ss_pred HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHH-HHHHHHHHH-HHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAIS-CLTA 373 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~-~~~~ 373 (503)
+.....+++.++.|.|+++ .+.+.... .+.....++..++.+..|+++||+++|+ ... ...+...+. ..+.
T Consensus 233 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~-----~~~~~~~l~~~~~~~~l~ 306 (402)
T TIGR00897 233 INTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMN-----TVRWFGGVGCGIFTLALY 306 (402)
T ss_pred HHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchh-----HHHHHHHHHHHHHHHHHH
Confidence 7777778888899988866 67776544 4445667889999999999999999873 322 111111111 1111
Q ss_pred HH----hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692 374 FC----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 449 (503)
Q Consensus 374 ~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 449 (503)
.. .++.+......++.+.+.+.. .+...... +.+|++|+++.|+.+...++ |..++|.+.|.+.|..| +...
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~G~~~~~~-~~~~~~~~-~~~~~~~g~~~g~~~~~~~l-g~~~gp~i~g~l~~~~g-~~~~ 382 (402)
T TIGR00897 307 YIPQHFGHSFAVALIIAIALGIFLAGY-VPLAAVFP-TLAPKHKGAAMSVLNLSAGL-SAFLAPAIAVLFIGFFG-AIGV 382 (402)
T ss_pred HHHHccCCcHHHHHHHHHHHHHHHHHH-HHHHHHHH-hhCcchhHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcc-hHHH
Confidence 11 123344444455555555443 33444444 45677899999999988888 88889999999999887 5677
Q ss_pred HHHHHHHHHHHHHHHH
Q 010692 450 TLALTSIFFLAAGIWF 465 (503)
Q Consensus 450 ~~~~~~~~~~~~~~~~ 465 (503)
+++.+++.+++.++..
T Consensus 383 ~~~~a~~~~i~~~~~~ 398 (402)
T TIGR00897 383 VWIFAALYVVSAFLTA 398 (402)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 7777766666555544
No 47
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.3e-34 Score=270.49 Aligned_cols=368 Identities=15% Similarity=0.166 Sum_probs=281.5
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~ 142 (503)
..++++|..|.+++.+.+..|+.+++++.|++.||||.|+++..+.++.++++++...+. +++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 457999999999999999999999999999999999999999999999999999998875 456789999999999999
Q ss_pred hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
.+|+...+.+.|.|++||++..++...+..+|.+++.+++|++.+. +||+++|++.++++++..++++++..+++.+
T Consensus 145 ~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~-- 222 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSK-- 222 (466)
T ss_pred HHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCccc--
Confidence 9999999999999999999999999999999999999999999988 9999999999999999998888877543322
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
++....+| .+.+++.+.+++.+++ ...+++++++++.+|...+..++..+.
T Consensus 223 ----h~~is~~E--------------l~~I~~~k~~~~~~~~-----------~~vP~~~i~ts~~vwai~~~~f~~~~~ 273 (466)
T KOG2532|consen 223 ----HPNISEKE--------------LKYIEKGKSEAHVKKK-----------PPVPYKAILTSPPVWAIWISAFGGNWG 273 (466)
T ss_pred ----CCCCCHHH--------------HHHHHhcccccccCCC-----------CCCCHHHHHcCHHHHHHHHHHHHHHHH
Confidence 22111111 1111111111111110 115688999999999999999999999
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhccccc---chhhHHHHHHH-HHHHHHHHHHHHHh
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGAT---ISNAFKLLSAA-TFLGAISCLTAFCL 376 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~~ 376 (503)
.+.+..|+|.|+++.++++..+. .+++++.+...+..+++|.++||+.+| ....++++-.. ....++.++.+...
T Consensus 274 ~~~l~~y~PtY~~~VL~f~v~~~G~~salP~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~ 353 (466)
T KOG2532|consen 274 FYLLLTYLPTYLKEVLGFDVRETGFLSALPFLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFT 353 (466)
T ss_pred HHHHHHHhhHHHHHHhCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeec
Confidence 99999999999999999996554 677899999999999999999998774 11223444332 23333333333333
Q ss_pred h--hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh--hhhhHHHHHHH
Q 010692 377 S--SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD--HVNNWRKTTLA 452 (503)
Q Consensus 377 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~--~~g~~~~~~~~ 452 (503)
+ +.+..+.++.+.....+...+. .........|++.+..+|+.+....+ .++++|.+.|.+.. ....|+..|++
T Consensus 354 ~~~~~~~a~~~l~~~~~~~g~~~~G-f~~~~~~~apq~a~~l~g~~~~~~~~-~~~~~P~~vg~~~~~~t~~eW~~VF~i 431 (466)
T KOG2532|consen 354 SDEHRLLAVILLTIAIGLSGFNISG-FYKNHQDIAPQHAGFVMGIINFVGAL-AGFIAPLLVGIIVTDNTREEWRIVFLI 431 (466)
T ss_pred CCCcchHHHHHHHHHHHHcccchhh-hHhhhhhccchHHHHHHHHHHHHHHH-HHHHHHHheeeEeCCCCHHHHHHHHHH
Confidence 3 2223344444333333333333 32333333678999999999998888 77889999999983 23468899999
Q ss_pred HHHHHHHHHHHHH
Q 010692 453 LTSIFFLAAGIWF 465 (503)
Q Consensus 453 ~~~~~~~~~~~~~ 465 (503)
.+++.+++.+++.
T Consensus 432 ~a~i~~~~~i~f~ 444 (466)
T KOG2532|consen 432 AAGILIVGNIIFL 444 (466)
T ss_pred HHHHHHHhchhee
Confidence 8888777775544
No 48
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=6.3e-33 Score=265.07 Aligned_cols=340 Identities=14% Similarity=0.086 Sum_probs=246.1
Q ss_pred cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692 64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~ 143 (503)
+++++|++..++|++.+.+.++..+.+++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+..
T Consensus 37 ~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~ 116 (400)
T PRK11646 37 FVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTLF 116 (400)
T ss_pred HHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Q 010692 144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 223 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 223 (503)
.+...+++.|++|+++|++++++.....++|..+||.+++.+. .+|||+.|++.++..++..++..+..||...
T Consensus 117 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~----- 190 (400)
T PRK11646 117 DPPRTALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKL----- 190 (400)
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCcccc-----
Confidence 8999999999999999999999999999999999999999998 6799999999988777666555555444110
Q ss_pred cccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 010692 224 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 303 (503)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (503)
+++.. +..+++++++++|.++...+..+.......
T Consensus 191 -~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (400)
T PRK11646 191 -STVRT--------------------------------------------PVREGMTRVLRDKRFVTYVLTLTGYYMLAV 225 (400)
T ss_pred -cccch--------------------------------------------hhHHHHHHHHcCchHHHHHHHHHHHHHHHH
Confidence 00000 001335567788887765554444443334
Q ss_pred hhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhh-cccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692 304 AYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILD-QMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 382 (503)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (503)
....+.|.|+++.++.+.....+.....+....+....+++.| |++.+ +.+..+..+..+..+.....++.+..
T Consensus 226 ~~~~~~p~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~~~~~~~~~~~~~l~~~~~~~~~ 300 (400)
T PRK11646 226 QVMLMLPIMVNDIAGSPSAVKWMYAIEACLSLTLLYPIARWSEKRFRLE-----HRLMAGLLIMSLSMFPIGMVSNLQQL 300 (400)
T ss_pred HHHHhhhhhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HHHHHHHHHHHHHHHHHHHhhhHHHH
Confidence 4556789998887664432223333444444433444455554 44433 33333333333333333334444444
Q ss_pred HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh---HHHHHHHHHHHHHH
Q 010692 383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN---WRKTTLALTSIFFL 459 (503)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~---~~~~~~~~~~~~~~ 459 (503)
....++.+.+.+...+....+..+..|+++||++.|+.+...+. |..+||.+.|++.|..++ ....+...+.+.++
T Consensus 301 ~~~~~l~~~g~~~~~p~~~~~~~~~~p~~~~g~~~g~~~~~~~~-g~~ig~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~ 379 (400)
T PRK11646 301 FTLICLFYIGSIIAEPARETLSASLADARARGSYMGFSRLGLAL-GGAIGYIGGGWLFDLGKALNQPELPWMMLGIIGLI 379 (400)
T ss_pred HHHHHHHHHHHHHHHccHHHHHHhcCCcccchhhhhHHHHHHHH-HHHhcccchHHHHHHHhhcCCcchHHHHHHHHHHH
Confidence 44445555555666677788888999999999999999888877 999999999999998643 23344444444333
Q ss_pred H
Q 010692 460 A 460 (503)
Q Consensus 460 ~ 460 (503)
+
T Consensus 380 ~ 380 (400)
T PRK11646 380 T 380 (400)
T ss_pred H
Confidence 3
No 49
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=268.74 Aligned_cols=324 Identities=19% Similarity=0.203 Sum_probs=237.6
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
..+.+|.+....+.+.+.++|.++++++.+++|.+.||++..+.+....+++++..++....+|++.+++.|++.|+..+
T Consensus 70 ~g~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es 149 (495)
T KOG2533|consen 70 SGLKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFES 149 (495)
T ss_pred cCCccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhc
Confidence 55679999999999999999999999999999999999999999999999999999898889999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh------cCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV------GSHLNWRYAFWGEAILMLPFAVLAFVIKPL 215 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l------~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 215 (503)
..+|....+++.|+.+++|+..++++.+..++|.++|.+++..+ ....||||.|++.++++++..+++++++|+
T Consensus 150 ~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~ 229 (495)
T KOG2533|consen 150 GGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPD 229 (495)
T ss_pred ccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecC
Confidence 99999999999999999999999999999999999999999886 345699999999999999999999999988
Q ss_pred ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692 216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 295 (503)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (503)
.+.+. +...++|+ +...++.++.+..... ++ ..+..+++.+++|.+|...+..
T Consensus 230 ~P~~~------~fl~~~ek--------------~~~~~~~~~~~~~~~~-----~~--~~~~~~~~a~~dp~vw~~~l~~ 282 (495)
T KOG2533|consen 230 NPSKA------WFLTDEEK--------------ELVVERLRESPSGGIE-----NK--FKWKGFKEALKDPGVWPFSLCY 282 (495)
T ss_pred Chhhc------cccchHHH--------------HHHHHHHHhccCCCcc-----cc--cCHHHHHHHHhchhHHHHHHHH
Confidence 55422 11100000 0000000000000000 00 1126788999999999999999
Q ss_pred HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH-HHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL-GAISCLTA 373 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 373 (503)
++.....+++.+|+|.|+.+..+.+.... .+.....++++++.+++|+++||+..-... +........+ ........
T Consensus 283 ~~~~lv~~~~~~~lpl~l~~~~~~s~~~a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~-~~~~~~~~~~~~~~g~~~l 361 (495)
T KOG2533|consen 283 FFLKLVNYGFSYWLPLYLKSNGGYSELQANLLSTPYDVGGIVGLILAGYLSDRLKTIFAR-RLLFIVFLCLYAIIGAISL 361 (495)
T ss_pred HHHhhccccHHHHHHHHHHcCCCcChHHhccccchHHhhhHHHHHHHHHHHHHHhhhHHH-HHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999556765444 667788899999999999999996411000 0233222222 22222322
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc
Q 010692 374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR 413 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (503)
........................+.......+...++.+
T Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~s~~~~g~~k 401 (495)
T KOG2533|consen 362 LAAAVLPGAYGAFLIGPYGLIATAIIALSWTSANLAGNTK 401 (495)
T ss_pred HhhccchHHhHHHHhcchhhHHHHHHHHhhccccccchHH
Confidence 2222223222223333333444455555566666655433
No 50
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=7.8e-33 Score=266.54 Aligned_cols=344 Identities=17% Similarity=0.196 Sum_probs=251.1
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHh---hhhhHHHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSSFDFWSIAICRM 134 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~ 134 (503)
..++|.+++++|+++.+.|++.+.+.+++.+++++.|++.||+|||+++..+..+++++.+++ +++++++.++++|+
T Consensus 46 ~~~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~ 125 (438)
T PRK10133 46 DILLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLF 125 (438)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHH
Confidence 334588899999999999999999999999999999999999999999999999999999886 46889999999999
Q ss_pred HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-c-------------------------
Q 010692 135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-H------------------------- 188 (503)
Q Consensus 135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~------------------------- 188 (503)
++|+|.+...+..++++.|+.++++|.+.+++.+..+.+|..+|+.+++.+.. .
T Consensus 126 l~G~g~g~~~~~~~~~v~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~ 205 (438)
T PRK10133 126 IIAAGLGCLETAANPFVTVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLV 205 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHH
Confidence 99999999999999999998877777778999999999999999999875430 0
Q ss_pred chhHHHHHHHHHHHHHHHHHH-HhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhh
Q 010692 189 LNWRYAFWGEAILMLPFAVLA-FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR 267 (503)
Q Consensus 189 ~gwr~~f~~~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 267 (503)
.+||++|+....+..+..++. ....||.+. ++++..
T Consensus 206 ~~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~-----~~~~~~-------------------------------------- 242 (438)
T PRK10133 206 LSVQTPYMIIVAIVLLVALLIMLTKFPALQS-----DNHSDA-------------------------------------- 242 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc-----cccccc--------------------------------------
Confidence 256667764443333222222 222233110 000000
Q ss_pred hhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchh-hhhcccchhhH-HHHHhhhhhhhhchhhhhhhh
Q 010692 268 FLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG-YNIYHMSNADM-MFGGVTIVCGIVGTISGGFIL 345 (503)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~ 345 (503)
+..+..++.++++++|.++...+..+++.....+...|.+.|+ ++..+.++... .......++.++|+++++++.
T Consensus 243 ---~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~ 319 (438)
T PRK10133 243 ---KQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAVEEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLI 319 (438)
T ss_pred ---cccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0000113355778889888777766777777777777888775 56678887655 445677788899999999999
Q ss_pred hcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692 346 DQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 425 (503)
Q Consensus 346 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 425 (503)
||+++| +.+..+..+....++.....++. ..+..+.+.+++.+..+|..++...+..++ +.+++.++.. ...
T Consensus 320 ~r~g~~-----~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~glg~~~i~P~~~s~a~~~~~~-~~~~as~l~~-~~~ 391 (438)
T PRK10133 320 SRFAPH-----KVLAAYALIAMALCLISAFAGGH-VGLIALTLCSAFMSIQYPTIFSLGIKNLGQ-DTKYGSSFIV-MTI 391 (438)
T ss_pred HHcCHH-----HHHHHHHHHHHHHHHHHHHcCCh-HHHHHHHHHHHHHHHHHHHHHHHHHcccch-hhccchhHHh-HHh
Confidence 999988 56555555544444333333332 234556678888889999999998888755 4677888775 344
Q ss_pred hcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 426 IFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 426 ~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
. |+.++|.+.|.+.|..|+.+..|++...+
T Consensus 392 ~-g~~~~~~i~G~l~~~~g~~~~~~~v~~~~ 421 (438)
T PRK10133 392 I-GGGIVTPVMGFVSDAAGNIPTAELIPALC 421 (438)
T ss_pred c-cchHHHHHHHHHHHhccchHHHHHHHHHH
Confidence 4 77788999999999876445566544443
No 51
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=1.2e-32 Score=263.84 Aligned_cols=337 Identities=14% Similarity=0.078 Sum_probs=238.2
Q ss_pred cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh--------hhhHHHHHHHHHHH
Q 010692 64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--------SSFDFWSIAICRML 135 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--------~~~~~~~l~~~r~l 135 (503)
+++|+|.|..++|++.+++.+++.++++++|+++||+|||++++.+.+...++.+... ..++++.++++|++
T Consensus 42 l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 121 (392)
T PRK12382 42 VHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLI 121 (392)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHH
Confidence 4789999999999999999999999999999999999999999999888777654332 23688999999999
Q ss_pred HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 215 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 215 (503)
+|++.+...+...+++.|++|+|+|++++++.+.+..+|..+||++++.+.+.+|||+.+.+..+..++.... ....||
T Consensus 122 ~G~~~~~~~~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~ 200 (392)
T PRK12382 122 LGFGESQLLTGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAF-NGTVRK 200 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHH-HHhccC
Confidence 9999999889899999999999999999999999999999999999999988889998877665443222211 111111
Q ss_pred ccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHH
Q 010692 216 QLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGY 295 (503)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (503)
. +++++++ ++.+ +..+.+++ +.+ ..
T Consensus 201 ~-----~~~~~~~-----------------------------------------~~~~---~~~~~~~~-~~~-----~~ 225 (392)
T PRK12382 201 V-----PAHAGER-----------------------------------------PSLW---SVVGLIWK-PGL-----GL 225 (392)
T ss_pred C-----CCCcccC-----------------------------------------chHH---HHHHHHHH-hHH-----HH
Confidence 0 0000000 0000 11111111 111 11
Q ss_pred HHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 375 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (503)
++..........+.|.|+++. +.+.... ......++.+++.++.|++.||+++| +.+..+..+..+.......
T Consensus 226 ~l~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~ 298 (392)
T PRK12382 226 ALQGVGFAVIGTFVSLYFASK-GWAMAGF-TLTAFGGAFVLMRVLFGWMPDRFGGV-----KVAIVSLLVETVGLLLLWL 298 (392)
T ss_pred HHHHHHHhHHHHHHHHHHHhc-CCchhHH-HHHHHHHHHHHHHHHHHHHHHhcCCC-----eehHHHHHHHHHHHHHHHH
Confidence 222233444556667777653 4443222 23345566788899999999999987 4444444444444333333
Q ss_pred hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHH
Q 010692 376 LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTS 455 (503)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~ 455 (503)
.++.+......++.+.+.+...+.......+..|+++||++.|+.+...++ |..++|.+.|++.|..| |+..+.+.+.
T Consensus 299 ~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~~~~~~ 376 (392)
T PRK12382 299 APTAWVALAGAALTGAGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDI-AYGVSGPLAGMLATSFG-YPSVFLAGAI 376 (392)
T ss_pred cccHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-chHHHHHHHH
Confidence 445555555556666666666667777788889999999999999988887 88889999999999877 8888888777
Q ss_pred HHHHHHHHHH
Q 010692 456 IFFLAAGIWF 465 (503)
Q Consensus 456 ~~~~~~~~~~ 465 (503)
+.+++.++..
T Consensus 377 ~~~~~~~~~~ 386 (392)
T PRK12382 377 SAVLGIIVTI 386 (392)
T ss_pred HHHHHHHHHH
Confidence 6666655443
No 52
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=1.2e-33 Score=267.60 Aligned_cols=326 Identities=20% Similarity=0.296 Sum_probs=247.0
Q ss_pred ccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692 63 PKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 63 ~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~ 142 (503)
.+.+++|.+..+.+++.+++.++..+++++.|+++||+|||+++..+.++.+++.++..+++|++.++++|++.|++.+.
T Consensus 22 ~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~ 101 (352)
T PF07690_consen 22 YLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGIGSGF 101 (352)
T ss_dssp HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccccccc
Confidence 56899999999999999999999999999999999999999999999999999977777778888999999999999999
Q ss_pred hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCc
Q 010692 143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP 222 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~ 222 (503)
..+...+++.|++|+++|++++++.+...++|.+++|.+++.+.+.++||+.|++.+++.++..++..++.++.++..++
T Consensus 102 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~ 181 (352)
T PF07690_consen 102 FSPASNALIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPPPPRER 181 (352)
T ss_dssp HHHHHHHHHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---STTTT-
T ss_pred ccccccccccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999888877555555442222111
Q ss_pred ccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 010692 223 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 302 (503)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (503)
+++.+.. .+++ ++..+.++.++++|.+|...+..++.....
T Consensus 182 ~~~~~~~---------------------------~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (352)
T PF07690_consen 182 ESPKESE---------------------------SKKP------------KPLKPGFKSLFKNPVLWILLIAFFLFFFVF 222 (352)
T ss_dssp -SSTTTT-----------------------------HH------------HCCCH-CTHHHHHHCCHHHHHHHHHHHHHH
T ss_pred ccccccc---------------------------cccc------------cccccccccccccchhhhhhhhhhHHHHHH
Confidence 1111000 0000 000012456667777775555555566677
Q ss_pred hhhhccccchhhhhcccc-hhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH---Hhh
Q 010692 303 GAYSYWGPKAGYNIYHMS-NADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF---CLS 377 (503)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 377 (503)
.....+.|.|+.+.++.+ .... .+..+..+..+++.++.+++.||++++ +................. ..+
T Consensus 223 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 297 (352)
T PF07690_consen 223 SGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVGIIGSLLAGRLSDRFGRR-----RRLLIAILLLILGALGLLLLPFSS 297 (352)
T ss_dssp HHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCH-----HHHHHHHHHHHHHHHHHCCSHHHC
T ss_pred HHhhcccchhhhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHHHHHHHHHHHHHHHhh
Confidence 778899999988888888 4444 445677778888899999999999886 333222222222222222 222
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
+....+....+.+++.+...+.......+..|++++|++.|+.+...++ |..++|
T Consensus 298 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-~~~igP 352 (352)
T PF07690_consen 298 SPVWLIIALFLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSL-GGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHH-HHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHCC
Confidence 3444555666677777788889999999999999999999999988887 766665
No 53
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=5.1e-32 Score=259.59 Aligned_cols=324 Identities=15% Similarity=0.089 Sum_probs=234.0
Q ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
+|.+.+++|.++.+.++..+.+.++..+++++.|+++||+|||++++.+.++.+++.+++.++++++.+++.|+++|++.
T Consensus 26 lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~ 105 (392)
T PRK10473 26 LPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGIGA 105 (392)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhh
Confidence 37778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
+...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++.++..||+.+..
T Consensus 106 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 185 (392)
T PRK10473 106 GCCYVVAFAILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETRPAR 185 (392)
T ss_pred hHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCCCcc
Confidence 99899999999999999999999999999999999999999999888889999999999888877777666666532110
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 300 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (503)
+++.. ...+..++.++++.++...+...+...
T Consensus 186 ----~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (392)
T PRK10473 186 ----APAAS--------------------------------------------SKPRENSESLLNRFFLSRLVITTLSVT 217 (392)
T ss_pred ----cCCcc--------------------------------------------chHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 00000 000223345667776655554444444
Q ss_pred HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692 301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 379 (503)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (503)
....+..+.|.++++..|.++... .+.....++.+++.++.+++.||+++| +....+..+.....+........
T Consensus 218 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~ 292 (392)
T PRK10473 218 VILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFALGIFKPR-----TLMLTSQVLFLAAGITLALSPSH 292 (392)
T ss_pred HHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 444556677888887778876544 344566778889999999999999987 55555544444433333333333
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc-hhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR-ALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+.......+...+.+...+.. ...+..|.++| +.+.++ ... +..+++.+.+++.+..|
T Consensus 293 ~~~~~~~~l~~~g~~~~~~~~--~~~~~~~~~~~~g~~~~~----~~~-~~~~g~~~~~~l~~~~g 351 (392)
T PRK10473 293 AVSLFGITLICAGFSVGFGVA--MSQALGPFSLRAGVASST----LGI-AQVCGSSLWIWLAAVLG 351 (392)
T ss_pred HHHHHHHHHHHHHHHHHhHHH--HHHHhccCcccccHHHHH----HHH-HHHHHHHHHHHHHHHhc
Confidence 333333333333333333322 22333344333 334333 333 55667888888888776
No 54
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.1e-33 Score=277.56 Aligned_cols=380 Identities=14% Similarity=0.145 Sum_probs=275.4
Q ss_pred hHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692 40 LAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 119 (503)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 119 (503)
+...++..++....+... |.+.+++|.+..+.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++
T Consensus 8 ~~~~~~~~~~~~~~~~~~----p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 8 MLGTFMAVLDSTIVNVAI----PTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHHHHHHH----HHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 334444444333433333 7778999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHH
Q 010692 120 CGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 199 (503)
Q Consensus 120 ~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 199 (503)
+++++|++.++++|+++|++.+...+...+++.|++|+++|+++++++.....+|..+||.+++++.++++||+.|++.+
T Consensus 84 ~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~ 163 (485)
T TIGR00711 84 CGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINV 163 (485)
T ss_pred HhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred HHHHHHHHHHHhccccccCCCCccccccccccc-------ccccCcccCCCCCcccc-ccchh-----------hhhhhh
Q 010692 200 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-------SVSEGSEASNLNDHVSE-DISDQ-----------ASERSI 260 (503)
Q Consensus 200 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~-~~~~~-----------~~~~~~ 260 (503)
+++++..++.++..|+..+.. .++.+..... .........+..++..+ .+... ...+.+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~--~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (485)
T TIGR00711 164 PIGIIVVVVAFFILPRDKPAA--SENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELT 241 (485)
T ss_pred HHHHHHHHHHHHHcCCccccc--cCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHc
Confidence 888777776666666532211 0000000000 00000000000000000 00000 000000
Q ss_pred cccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchh
Q 010692 261 KSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTI 339 (503)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 339 (503)
++ +... ..+++++|.++...+..++.....+...++.|.|+++..+.++... .......++.+++.+
T Consensus 242 ~~-----------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~ 309 (485)
T TIGR00711 242 DD-----------NPLV-DLRLFKYRNFTIGCVYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSP 309 (485)
T ss_pred CC-----------CCcc-CHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 00 0001 1256788888888887777778888888899999999888887555 444566788899999
Q ss_pred hhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH-Hh---hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692 340 SGGFILDQMGATISNAFKLLSAATFLGAISCLTAF-CL---SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 415 (503)
Q Consensus 340 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (503)
+.|++.||+++| +.+..+..+......... .. .+.+.......+.+++.+...++......+.+|++++++
T Consensus 310 ~~g~l~~r~~~~-----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g~ 384 (485)
T TIGR00711 310 IAGRMGDKIDPR-----KLVTIGLILYAVGFYWRAFTFTPDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIAR 384 (485)
T ss_pred HHHHHHhhcCcH-----HHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhH
Confidence 999999999987 555555444444433333 11 223344445566667776667777777888899999999
Q ss_pred HHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692 416 SMAISTVSIHIFGDVPSSPLVGVLQDHV 443 (503)
Q Consensus 416 ~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 443 (503)
+.|+.+...+. |+.+|+.+.|.+.+..
T Consensus 385 ~~~~~~~~~~~-g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 385 GSSLSNFTRQL-GGSIGTALITTILTNR 411 (485)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHH
Confidence 99999988887 8888999999988753
No 55
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=3.3e-32 Score=259.49 Aligned_cols=334 Identities=18% Similarity=0.193 Sum_probs=238.2
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+++|.|..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.++++|+++|++.+
T Consensus 30 p~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~~~ 109 (381)
T PRK03633 30 PLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGIGCA 109 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+...+.+.+..++++|++++++++.+.++|..+|+.+++.+.+...|+..+. .+........+.+...++. .
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~--~-- 184 (381)
T PRK03633 110 MIWVVVESALMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFTRILNQ--Q-- 184 (381)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHhcccCC--C--
Confidence 8888888888899999999999999999999999999999999876543333332 2222211111111111110 0
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
++ +++. .+.++.+++|.++......+.....
T Consensus 185 -~~-~~~~-----------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (381)
T PRK03633 185 -AE-NHDS-----------------------------------------------TSIWPMLKLRQARLGVNGCIISGIV 215 (381)
T ss_pred -CC-CCCC-----------------------------------------------CCHHHHHHhcchHHHHHHHHHHHHH
Confidence 00 0000 1123456677766554434444444
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHH
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 380 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (503)
......++|.|+++ .+.++... .+.....++.+++.+..+++.||+++| +.+..+.....+...... .. .
T Consensus 216 ~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~-----~~l~~~~~~~~~~~~~~~--~~-~ 286 (381)
T PRK03633 216 LGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRL-----LVLRVQVFVVILGSIAML--SQ-A 286 (381)
T ss_pred HHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcH-----HHHHHHHHHHHHHHHHHh--hh-H
Confidence 55566778988877 46665433 444566778889999999999999988 555444444333332222 11 1
Q ss_pred HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHH
Q 010692 381 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 460 (503)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 460 (503)
.......+.+.+.....+.......+..|+++++.+.+..+...++ |..++|.+.|++.|..| +...|.+.+.+.++.
T Consensus 287 ~~~~~~~l~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~igp~~~G~l~~~~g-~~~~f~~~~~~~l~~ 364 (381)
T PRK03633 287 AMAPALFILGAAGFTLYPVAMAWACEKVEHHELVAMNQALLLSYTV-GSLLGPSFTAMLMQNYS-DNLLFIMIASVSFIY 364 (381)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHH
Confidence 1222333344444455677777778888887778788887766666 89999999999999887 666777666655444
No 56
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=5.7e-32 Score=258.25 Aligned_cols=340 Identities=16% Similarity=0.156 Sum_probs=256.8
Q ss_pred ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHH
Q 010692 59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRML 135 (503)
Q Consensus 59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l 135 (503)
+.+|.+++++|++..+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++.. .++++.+++.|++
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l 103 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFI 103 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 3337789999999999999999999999999999999999999999999999999999988654 3689999999999
Q ss_pred HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc--------------------------c
Q 010692 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------------------------L 189 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------------------------~ 189 (503)
.|+|.|...+....++.+..|+++|++.+++.+...++|..+||.+++.+... .
T Consensus 104 ~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (410)
T TIGR00885 104 LTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDLA 183 (410)
T ss_pred HHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998877421 3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhc-cccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhh
Q 010692 190 NWRYAFWGEAILMLPFAVLAFVI-KPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRF 268 (503)
Q Consensus 190 gwr~~f~~~~~~~~~~~~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (503)
+||++|++.+++.++..++..+. .|+..+ +++++.
T Consensus 184 ~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~----~~~~~~---------------------------------------- 219 (410)
T TIGR00885 184 SVQTPYMIIGAVVLAVALLIMLTKMPALNH----SDAKQI---------------------------------------- 219 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCc----cccccc----------------------------------------
Confidence 69999999988776665544322 122100 000000
Q ss_pred hhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhc-ccchh-hHHHHHhhhhhhhhchhhhhhhhh
Q 010692 269 LNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIY-HMSNA-DMMFGGVTIVCGIVGTISGGFILD 346 (503)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d 346 (503)
+...+.++++|+|+++...+..+++.....+...+++.|.++.. +.+.. ...+......+..+|+++++++.|
T Consensus 220 -----~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~ 294 (410)
T TIGR00885 220 -----SFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRLIPGMTAGFAANYNIGAMVIFFISRFIGTWLIS 294 (410)
T ss_pred -----cchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00022446678888888888778887777777888888887643 22222 123344455778899999999999
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 347 QMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 347 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
|+++| +.+......+.+..++....++.. ....+.+.+++.+..+|..+....+..+++.+..+.++... .
T Consensus 295 r~~~~-----~~l~i~~~~~~~~~ll~~~~~~~~-~~~~l~~~glf~s~~fp~i~sl~~~~~g~~~~~~s~~l~~~---~ 365 (410)
T TIGR00885 295 YLAAH-----KVLMAYAIIGMALCLGSIFAGGHV-GLYCLTLCSAFMSLMFPTIYGIALKGLGQDTKYGAAGLVMA---I 365 (410)
T ss_pred HcCHH-----HHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhHHHHHHH---H
Confidence 99887 666666666666655555544433 35566667788888889999999999987665545555432 2
Q ss_pred cccccchhhHHHHHhhh-----hhHHHHHHHHHHH
Q 010692 427 FGDVPSSPLVGVLQDHV-----NNWRKTTLALTSI 456 (503)
Q Consensus 427 ~g~~~~~~~~g~l~~~~-----g~~~~~~~~~~~~ 456 (503)
+|+.+.|++.|++.|.. |+++.+|++...+
T Consensus 366 ~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~ 400 (410)
T TIGR00885 366 IGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLC 400 (410)
T ss_pred hccchHHHHHHHHHHHhcccccCccchHHHHHHHH
Confidence 48888999999999954 3466666654444
No 57
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=7.8e-32 Score=256.92 Aligned_cols=354 Identities=14% Similarity=0.088 Sum_probs=250.3
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
+.+.+|++.++.+.+++.+++.+++.+.++++|+++||+|||++++++.++.+++.++++++++. ++.|+++|++.+
T Consensus 27 ~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~~a 103 (393)
T PRK11195 27 IALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIGAA 103 (393)
T ss_pred HHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Confidence 34468899999999999999999999999999999999999999999999999999888887764 778999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...|...+++.|++|+++|++++++.+....+|.++||.+++++.+. .|+..+.+.+...++. .+..+..||.+.+.+
T Consensus 104 ~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~-~~~~~~l~~~~~~~~ 181 (393)
T PRK11195 104 AYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLA-ALFNLFIPRLGARRP 181 (393)
T ss_pred HHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-HHHHhcCCCCccccc
Confidence 99999999999999999999999999999999999999999999875 4888887776554433 333444555321100
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
+.+.. . . ...++..+..+.++++|.+........+....
T Consensus 182 ---~~~~~-------------------~----~---------------~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 220 (393)
T PRK11195 182 ---GQSWN-------------------P----I---------------ALLRDFFHACRVLWRDKLGRFSLAGTTLFWGA 220 (393)
T ss_pred ---ccCCC-------------------H----H---------------HHHHHHHHHHHHHHhCchhHHHHHHHHHHHHH
Confidence 00000 0 0 00011123345667777766555444444444
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHH
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 380 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (503)
.....+..|.++++.++.++... .+.....++.+++.++.+++.||.+++ +.+..+...+.. .+.....++.+
T Consensus 221 ~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~~~~~~l~~~~~~~-----~~~~~g~~~~~~-~~~~~~~~~~~ 294 (393)
T PRK11195 221 GATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGAGAAARLVTLETVL-----RVLPAGILMGLV-VLLMALQHSLL 294 (393)
T ss_pred HHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHhcCCccc-----chHHHHHHHHHH-HHHHHHHhHHH
Confidence 44555666777777788876555 444666778888889989988887766 444444333222 22222234444
Q ss_pred HHHHHHHHHHHHHhhccchhhHHhhcccCCCC-chhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 381 GFLALFTVGELLVFATQAPVNYVCLHSVKPSL-RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 459 (503)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 459 (503)
......++.+++.+...++......+..|++. +|++.++.+...+. +..++..+.+.+ +..| .+..+.+.+...+.
T Consensus 295 ~~~~~~~~~G~~~g~~~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~-~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 371 (393)
T PRK11195 295 PAYPLLILIGALGGFFVVPMNALLQHRGHVLVGAGHSIAVQNFNENL-AMLLMLGLYSLL-VKLG-VPVVAVIVGFGLLV 371 (393)
T ss_pred HHHHHHHHHHHhhhhhhhhHHHHHHhhCcccccchhHHHHHhHHHHH-HHHHHHHHHHHH-HHcC-CCHHHHHHHHHHHH
Confidence 44555556666666666777777776544444 79999999988888 888888787755 5555 55667776666666
Q ss_pred HHHHHHHHHHh
Q 010692 460 AAGIWFVGIFL 470 (503)
Q Consensus 460 ~~~~~~~~~~~ 470 (503)
...+.+.+++.
T Consensus 372 ~~~~~~~~~~~ 382 (393)
T PRK11195 372 ALAMALLWRWH 382 (393)
T ss_pred HHHHHHHHHHH
Confidence 66666655543
No 58
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=7.1e-32 Score=263.56 Aligned_cols=383 Identities=13% Similarity=0.068 Sum_probs=266.7
Q ss_pred CCcchhhhhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-
Q 010692 22 NLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH- 100 (503)
Q Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~- 100 (503)
+.|.+|+++||...+.++++...+... ...... |...++.|.+.+++|.+ +.....+ ++.+++|+++||+
T Consensus 3 ~~~l~~~~~~~~~~~~~l~~~~gl~~~---~~~~~l----~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~ 73 (491)
T PRK11010 3 SQYLRIFQQPNSAILLILGFASGLPLA---LTSGTL----QAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYT 73 (491)
T ss_pred hhHHHHHcccHHHHHHHHHHHHHHHHH---HHHHHH----HHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHccc
Confidence 346788877876665555544444433 333334 44467889999999986 4444444 6899999999999
Q ss_pred ----CCchh-HHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHh
Q 010692 101 ----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172 (503)
Q Consensus 101 ----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 172 (503)
|||+. ++.+.+..+++..+.++. ++++.+.+.+++.|++.+...+...+++.|++|+++|+++.++...+..
T Consensus 74 ~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~~~~~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~ 153 (491)
T PRK11010 74 PPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLAALAVVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYR 153 (491)
T ss_pred ccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHH
Confidence 99985 667877787887777775 5788999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhcC-cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692 173 TGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 251 (503)
Q Consensus 173 ~G~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (503)
+|.++++.++.++.+ ..|||..|++.+++.++..+..++ .||+++.. ++++..
T Consensus 154 lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~~~~-~~e~~~~~---~~~~~~---------------------- 207 (491)
T PRK11010 154 LAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIATLL-APEPTDTI---PVPKTL---------------------- 207 (491)
T ss_pred HHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHHHHh-cCCCcccc---ccccch----------------------
Confidence 999999999999988 579999999999887766555443 45532110 000000
Q ss_pred chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHH--Hh
Q 010692 252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG--GV 329 (503)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 329 (503)
+ +....++++.++++..|...+..+++.........+.+.|+.+..|.+....... ..
T Consensus 208 ------~--------------~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~ 267 (491)
T PRK11010 208 ------E--------------QAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTL 267 (491)
T ss_pred ------h--------------hhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 0 0001345566777777766655555555555556677778777778887655332 34
Q ss_pred hhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH---HHHHh-hhHHHHHHHHHHHHHHHhhccchhhHHhh
Q 010692 330 TIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCL 405 (503)
Q Consensus 330 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (503)
..++.+++.+++|++.||+++| +.+....++..+..+ ..... ++.+......++..++.+...+.......
T Consensus 268 g~i~~iiG~ll~G~L~dr~g~~-----~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~a~~~ 342 (491)
T PRK11010 268 GLLATIVGALYGGILMQRLSLF-----RALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFVALLM 342 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999987 444333332222111 11111 23333333334433344444556677778
Q ss_pred cccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010692 406 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 466 (503)
Q Consensus 406 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 466 (503)
+..+++.+++..|+.+...++ |..+++.+.|++.|..| |...|.+.+++.+.+.+....
T Consensus 343 ~l~~~~~~~t~~gl~~s~~~l-g~~~~~~~~G~l~~~~G-~~~~f~~~~~~~l~~l~~~~~ 401 (491)
T PRK11010 343 TLCNKSFSATQFALLSALSAV-GRVYVGPVAGWFVEAHG-WPTFYLFSVAAAVPGLLLLLV 401 (491)
T ss_pred HHcCCCCcHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-hHHHHHHHHHHHHHHHHHHHH
Confidence 888889999999999888877 87778889999999887 877788777777666555543
No 59
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=4.7e-33 Score=268.18 Aligned_cols=357 Identities=17% Similarity=0.198 Sum_probs=252.3
Q ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
.|.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++.+++++++.+++.|++.|++.
T Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 119 (398)
T TIGR00895 40 APAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLGL 119 (398)
T ss_pred HHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhccc
Confidence 36668999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
+...+...+++.|++|+++|++++++...+..+|..+++.+++.+.+..|||+.|++.+++.++..++.++..||.++..
T Consensus 120 ~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (398)
T TIGR00895 120 GGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESIDFL 199 (398)
T ss_pred ccchhhHHHHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCChHH
Confidence 99999999999999999999999999999999999999999999999899999999988777777666666667654321
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 300 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (503)
.++++++.... .++....... +.++...+ ++.++ +..++..+..++..+.+..+...+..++...
T Consensus 200 ~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~----~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 264 (398)
T TIGR00895 200 VSKRPETVRRI---VNAIAPQMQA-EAQSALPE----QKATQ-------GTKRSVFKALFQGKTARITVLLWLLYFMLLV 264 (398)
T ss_pred HhcCHHHHHHH---HHHHHHhccc-cccccccc----ccccc-------chhhHHHHHHhcchhHHHHHHHHHHHHHHHH
Confidence 11100000000 0000000000 00000000 00000 0000111111111122333444444445555
Q ss_pred HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692 301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 379 (503)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (503)
.......+.|.+ .+..+.++... .......++.+++.++.+++.||+++| .......+......++.....+.
T Consensus 265 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 338 (398)
T TIGR00895 265 GVYFLTNWLPKL-MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPR-----VTALLLLLGAVFAVLVGSTLFSP 338 (398)
T ss_pred HHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchH-----HHHHHHHHHHHHHHHHHHHhhCH
Confidence 666677788844 44466665443 455667788899999999999999987 34433333333333333223455
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 439 (503)
+......++.+++.+...+.......+.+|++.|+++.|+.+...++ |..++|.+.|++
T Consensus 339 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~~g~~~~G~l 397 (398)
T TIGR00895 339 TLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIRATGVGWAIGIGRL-GAIIGPILAGYL 397 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHH-HHHHHHHhHHhc
Confidence 55566666777777777888888999999999999999999888887 888899888875
No 60
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=1.7e-31 Score=254.94 Aligned_cols=324 Identities=17% Similarity=0.192 Sum_probs=240.4
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+++|+++.+.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+
T Consensus 15 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~~~~ 94 (377)
T PRK11102 15 PVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGLAAA 94 (377)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHH
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+...+++.|++|+++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..++..+..||..+..
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 173 (377)
T PRK11102 95 AASVVINALMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETLPKE- 173 (377)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccCccc-
Confidence 9999999999999999999999999999999999999999999998889999999998888777776666666532110
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
++++. +.++..+++++.+++|.++...+...+....
T Consensus 174 ---~~~~~-----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (377)
T PRK11102 174 ---RRQPF-----------------------------------------HLRTTIRNFASLFRHKRVLGYMLASGFSFAG 209 (377)
T ss_pred ---ccCCC-----------------------------------------ChHHHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 00000 0000113455677888888777666666666
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH---HHHHhh
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL---TAFCLS 377 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 377 (503)
...+..+.|.++.+..+.++... .+.....++.+++.++.+++.||+++| +.+..+..+.....+ .....+
T Consensus 210 ~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 284 (377)
T PRK11102 210 MFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIINSRFVRRVGAL-----NMLRFGLWIQFIMGIWLVVSALLD 284 (377)
T ss_pred HHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66777788888888778776544 444666788889999999999999988 555444333222111 111111
Q ss_pred -hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhH
Q 010692 378 -SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 436 (503)
Q Consensus 378 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 436 (503)
+.+.......+.....+...........+.. |+.++++.++.+.....+|..+++.+.
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~g~~~g~~~~ 343 (377)
T PRK11102 285 LGFWALVVGVAAFVGCVSMISSNAMAVILDEF-PHMAGTASSLAGTLRFGIGAIVGALLS 343 (377)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHhccc-cccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2232333333333333333344444555554 588999999987766554666666443
No 61
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=100.00 E-value=5.8e-32 Score=259.90 Aligned_cols=407 Identities=14% Similarity=0.114 Sum_probs=300.6
Q ss_pred CCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHH-
Q 010692 53 DSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAI- 131 (503)
Q Consensus 53 ~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~- 131 (503)
.......+++.++++|+.+.++++|+.++....+.+..++.+.+.||||.|.+.+.|.++.++|.++.++++++|++++
T Consensus 61 ~~~~~Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt 140 (509)
T KOG2504|consen 61 LINSFGLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLT 140 (509)
T ss_pred chheehhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 3333445668889999999999999999999999999999999999999999999999999999999999999999887
Q ss_pred HHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692 132 CRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 132 ~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
.-++.|+|.|..+.....++..+|+++ |+.+.|+...+.++|..+-|.+...+.+.+|||+.+++.+.+.+-..+....
T Consensus 141 ~gvi~G~G~~~~~~paiviv~~YF~kk-R~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~ 219 (509)
T KOG2504|consen 141 FGVIGGLGLGLIYLPAVVILGTYFEKK-RALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGAL 219 (509)
T ss_pred HHHHhhccchhhhcchhhhhhhHhHHH-HHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHH
Confidence 778889999999999999999888765 9999999999999999999999999999999999999999998777777777
Q ss_pred ccccccCCCCcccccccccccccccCcc----cCCCCCc-ccc-ccchhhhhhhhcccchhhhhhhhhchH-HHHHHHhh
Q 010692 212 IKPLQLKGFAPAESGKAQVVASVSEGSE----ASNLNDH-VSE-DISDQASERSIKSIGESRFLNQLSQFS-QDTKVLLQ 284 (503)
Q Consensus 212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 284 (503)
+.|...+..++.+++......+...... .....+. ... ........++.+++... ...+... .--.++++
T Consensus 220 ~rp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~d~~ll~ 296 (509)
T KOG2504|consen 220 LRPLSPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRN---SPLQAFLSMLDLSLLK 296 (509)
T ss_pred cCCCCcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccc---cchhhhhhhhhHHHHc
Confidence 7765443322200000000000000000 0000000 000 00000000000000000 0000000 00147889
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch-hhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (503)
++.++...+...+....+.....++|.|..+ .+.+. ....+.++.++..++++++.|++.|+...++. .+...+.
T Consensus 297 ~~~fl~~~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~---~~~~~~l 372 (509)
T KOG2504|consen 297 DPKFLLLALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRAL---VLFLLTL 372 (509)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchH---HHHHHHH
Confidence 9999999999999999999999999999986 55554 44466788899999999999999999884421 3334444
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692 364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 443 (503)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 443 (503)
+...+..+......+.+.++....+.+++.+........++.+.++.++-..+.|+...+..+ +.++||++.|++.|.+
T Consensus 373 l~~gl~~~~~p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi-~~l~gpPiag~~~d~t 451 (509)
T KOG2504|consen 373 LIAGLARLFLPFATTYVGLIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGI-GALVGPPIAGLLYDIT 451 (509)
T ss_pred HHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHH-HHHcCcccceeeeecc
Confidence 444444445555566667777777777777766666666888899999999999999877777 8999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692 444 NNWRKTTLALTSIFFLAAGIWFVGI 468 (503)
Q Consensus 444 g~~~~~~~~~~~~~~~~~~~~~~~~ 468 (503)
|+|...|++.+.+.+++..+++...
T Consensus 452 g~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 452 GNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred CCeeeehhhcChHHHHHHHHHHHhH
Confidence 9999999999999988888877666
No 62
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=100.00 E-value=2.1e-31 Score=265.61 Aligned_cols=364 Identities=20% Similarity=0.314 Sum_probs=265.4
Q ss_pred CCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-----------
Q 010692 56 PTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----------- 124 (503)
Q Consensus 56 ~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----------- 124 (503)
.....+++++++|+++.++.|++.+.+.++++++.++.|+++||+|||+++.++.++++++++++++.+
T Consensus 51 ~~~~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 51 LVNSSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHHhhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 344444888999999999999999999999999999999999999999999999999999999998764
Q ss_pred ----------------------------------------HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHH
Q 010692 125 ----------------------------------------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWL 164 (503)
Q Consensus 125 ----------------------------------------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~ 164 (503)
.+..++++|+++|+|.+..++...+++.|++|+++|++++
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~ 210 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYI 210 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHH
Confidence 2456788999999999999999999999999999999999
Q ss_pred HHHHhHHhHHHHHHHHHHHhhcCcc----------------------hhHHHHHHHHHHHHHHHHHHHhccccccCCCCc
Q 010692 165 SMFYMCIPTGVALGYVYGGVVGSHL----------------------NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAP 222 (503)
Q Consensus 165 ~~~~~~~~~G~~~g~~l~~~l~~~~----------------------gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~ 222 (503)
++++.+..+|.++|+++++++.+.+ +||..|++.+++.++.++.++ +.|+..+....
T Consensus 211 ~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~-~~p~~lp~~~~ 289 (633)
T TIGR00805 211 GILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFF-FFPKALPKEGK 289 (633)
T ss_pred HHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHH-hCccccCCccc
Confidence 9999999999999999999887532 388889999888877776544 44543221100
Q ss_pred ccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 010692 223 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 302 (503)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (503)
.++.+... ++ ..+ .. .+ +.+.......++..+.++.++++|.++...+..++.....
T Consensus 290 ~~~~~~~~-~~---~~~---~~---~~-------------~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~ 346 (633)
T TIGR00805 290 RVNVDVHE-TE---KLE---KS---ED-------------KSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAF 346 (633)
T ss_pred ccchhhhh-hh---ccc---cc---cc-------------ccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHH
Confidence 00000000 00 000 00 00 0000000112334466788999999999999999999999
Q ss_pred hhhhccccchhhhhcccchhhH-HHHHhhhh-hhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH--------
Q 010692 303 GAYSYWGPKAGYNIYHMSNADM-MFGGVTIV-CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT-------- 372 (503)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 372 (503)
+++..|+|.|+++.++.++... .+.....+ +.+++.+++|+++||++.+.+...++.+...++..+....
T Consensus 347 ~~~~~~lP~yl~~~~g~s~~~ag~l~~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~ 426 (633)
T TIGR00805 347 NGYITFLPKYLENQYGISSAEANFLIGVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSYLLCSPLFLIGCES 426 (633)
T ss_pred HHHHHHHHHHHHHHcCCcHHHHHHHhhhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHHHHHHHHHeecCCC
Confidence 9999999999999999987655 33333343 5678999999999999876432222222222222111110
Q ss_pred -------------------HHH------------------------------------------h---------------
Q 010692 373 -------------------AFC------------------------------------------L--------------- 376 (503)
Q Consensus 373 -------------------~~~------------------------------------------~--------------- 376 (503)
... .
T Consensus 427 ~~~agv~~~y~~~~~~~~~~~~Cn~~C~C~~~~~~PVCg~~~~tY~SpC~AGC~~~~~~~~~~~y~~CsCi~~~~~~~a~ 506 (633)
T TIGR00805 427 APVAGVNNPSTDQSIYVENPTDCNRQCSCDSSFFDPVCGDNGLAYLSPCHAGCSMSVGTGSNMVYTNCSCVQTPGNSSAK 506 (633)
T ss_pred CccceeeccCCCcccCCCChhccCCCCCCCCCCcccccCCCCCEEECccccCCCCccCCCCcceecccccccCCCCCCCc
Confidence 000 0
Q ss_pred --------hh-HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692 377 --------SS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 443 (503)
Q Consensus 377 --------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 443 (503)
.. ...+++.+++..+..+....|.+.++.+.+|+++|+.+.|+.....+++|.+.+|+++|++.|..
T Consensus 507 ~g~C~~~C~~~~~~f~~~~~~~~~~~~~~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~~iD~s 582 (633)
T TIGR00805 507 KGLCNPPCATSLLYFLILFIPLSFIAFITAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGLLIDVS 582 (633)
T ss_pred CCCCCcccchhHHHHHHHHHHHHHHHHhccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhhhhhch
Confidence 00 12233444444455556677888888999999999999999999999999999999999999864
No 63
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1.1e-31 Score=256.16 Aligned_cols=335 Identities=16% Similarity=0.085 Sum_probs=244.5
Q ss_pred cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692 64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~ 143 (503)
+++++|++..++|++.+++.++..+++++.|+++||+|||++++++.++.+++.++.+++++++.++++|++.|.+.+..
T Consensus 34 l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 113 (395)
T PRK10054 34 LSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYSVF 113 (395)
T ss_pred HHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcc
Q 010692 144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPA 223 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 223 (503)
.+...++..|.+|+++|++++++.....++|.++||++++.+.+ .+||.+|++.+++.++..++..+..|+..+.
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~---- 188 (395)
T PRK10054 114 STVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKA---- 188 (395)
T ss_pred HHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhccccc----
Confidence 88899999999999999999999999999999999999999875 6999999998888777665555555442111
Q ss_pred cccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhh
Q 010692 224 ESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIG 303 (503)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (503)
++++.. + ..+.++.+++|.++...+..++......
T Consensus 189 ~~~~~~----------------------------------------~-----~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 223 (395)
T PRK10054 189 IATETG----------------------------------------S-----VWSPSVLLQDKALLWFTCSGFLASFVSG 223 (395)
T ss_pred cccchh----------------------------------------h-----hhhhhhhccCceehHHHHHHHHHHHHHH
Confidence 000000 0 0112456788888877766666555555
Q ss_pred hhhccccchhhhhcc--cchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH-hhhH
Q 010692 304 AYSYWGPKAGYNIYH--MSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC-LSSL 379 (503)
Q Consensus 304 ~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 379 (503)
.+..+.+.|.....+ .+.... .+.....+......+..+++.||.++| +.+..+..+..+....... .++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~ 298 (395)
T PRK10054 224 AFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLNAANIR-----PLMTAGTLCFVIGLVGFIFSGNSL 298 (395)
T ss_pred HhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHccCCch-----hHHHHHHHHHHHHHHHHHHcchHH
Confidence 555566666644322 222222 233344445555667778899998887 5554444433333333322 2344
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
+.+.+...+.+.+.....+.....+.+..|++.++++.+..+ ..+. |..+||.+.|.+.|..| +...+++.+.+
T Consensus 299 ~~~~~~~~~~~~g~~~~~p~~~~~~~~~~p~~~~~~~~~~~~-~~~~-G~~~Gp~~~G~l~~~~g-~~~~~~~~~~~ 372 (395)
T PRK10054 299 LLWGMSAAVFTVGEIIYAPGEYMLIDHIAPPGMKASYFSAQS-LGWL-GAAINPLVSGVILTTLP-PWSLFVILALA 372 (395)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHhCCcccceehHhHHH-HHHH-HHHHHHHHHHHHHHHcC-hhhHHHHHHHH
Confidence 444555556666665556666777888888899999988764 4555 88999999999999987 44555554443
No 64
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=3.3e-31 Score=254.78 Aligned_cols=330 Identities=19% Similarity=0.147 Sum_probs=240.8
Q ss_pred CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
.|.+ +++.+++|.++++.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.++++++++++.+++.|+++
T Consensus 26 ~p~~-~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 104 (401)
T PRK11043 26 LPAF-KAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQ 104 (401)
T ss_pred HhhH-HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 3444 778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
|++.+...+...+++.|+++++++++..+.......+|..++|.+++.+.+.+|||+.|++.+++.++..++.++..|+
T Consensus 105 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~- 183 (401)
T PRK11043 105 AVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPS- 183 (401)
T ss_pred HhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCC-
Confidence 9998888888889999999999999999999999999999999999999998999999999988877766655444322
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
.+ ++++.. ...++++++++|.++...+...
T Consensus 184 ~~-----~~~~~~---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 213 (401)
T PRK11043 184 KK-----ARKQSQ---------------------------------------------DALTFKQLLKSKTYLGNVLIFA 213 (401)
T ss_pred CC-----ccccch---------------------------------------------HHHHHHHHHcChhHHHHHHHHH
Confidence 11 000000 0034566777888776555555
Q ss_pred HHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 375 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (503)
+.......+..+.|.++++ .+.++... .......++.+++.++.+++.||+++|+.. +.......++.........
T Consensus 214 ~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~~~~~~~--~~~~~~~~~~~~~~~~~~~ 290 (401)
T PRK11043 214 ACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKWGGEQLL--PWLLVLFAVSVIAIWLASL 290 (401)
T ss_pred HHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH--HHHHHHHHHHHHHHHHHHH
Confidence 5555556667788888765 57776444 333444567788888899999999876311 1111111111111111111
Q ss_pred --hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692 376 --LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 443 (503)
Q Consensus 376 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 443 (503)
.++.+..+....+.+++.+..++.......+.. |+++|++.|+.+..... +...++.+.|.+.|..
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~-~~~~~~~~~g~l~~~~ 358 (401)
T PRK11043 291 LSHPSLVPLLIPFCVMAAANGAIYPIVVAQALRPF-PQATGKAAALQNTLQLG-LCFLASLLVSALISTP 358 (401)
T ss_pred hccCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhC-cccChHHHHHHHHHHHH-HHHHHHHHHHHccCCC
Confidence 123333344445556666666666666655555 56899999999887666 6666788888887743
No 65
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=9.5e-31 Score=250.21 Aligned_cols=342 Identities=10% Similarity=0.066 Sum_probs=226.7
Q ss_pred cccccCCCccchhhHHHHHHH-HHHHHHhHHHHhhhhcCCchhH-HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 64 KRGDFKLNNFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
+.+++|++.+++|++.+...+ ++.++.+++|+ +||+||||.+ ..+.++.+++..+.+++++++.+++.+.+.|...+
T Consensus 42 l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 120 (393)
T PRK15011 42 LTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFGS 120 (393)
T ss_pred HHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 378999999999999876655 55566655555 9999999875 55666667888888899999988766655554455
Q ss_pred hhhhchhhhhhccCCCCCc--hhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 142 SFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
...|...+++.|+.++++| +...++.+.+.++|.++||++++.+.+++|||..|++.+++.++..+..++..||.++.
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 200 (393)
T PRK15011 121 TANPQMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMRKE 200 (393)
T ss_pred hhHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccCCC
Confidence 6788888888998876655 34557889999999999999999999889999999999988887777767666663211
Q ss_pred CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN 299 (503)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (503)
.+ ++++.. + ..++ +++..+..........
T Consensus 201 ~~--~~~~~~-------------------~----------------------------~~~~--~~~~~~~~~~~~~~~~ 229 (393)
T PRK15011 201 LP--LATGTL-------------------E----------------------------APRR--NRRDTLLLFVICTLMW 229 (393)
T ss_pred Cc--cccccc-------------------c----------------------------cccc--ccccHHHHHHHHHHHH
Confidence 00 000000 0 0000 0111122222223333
Q ss_pred HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692 300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 378 (503)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (503)
.....+..+.|.|+++.++.++... .+.....+..+++.++.|+++||+++| +.+.................++
T Consensus 230 ~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~-----~~~~~~~~~~~~~~~~~~~~~~ 304 (393)
T PRK15011 230 GTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKR-----FLMRVAAVAGVCFYAGMLMAHS 304 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHHHHHHHHHHHHHhh
Confidence 3444556688989988888876544 333445566778899999999999998 4444333333332222222334
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 458 (503)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 458 (503)
.+..+...++.++..+...+.......+..| ++++++.++.+...++ |..++|.+.|.+.|..| |+..+.+..++.+
T Consensus 305 ~~~~l~~~~l~~~~~g~~~~~~~~~~~~~~p-~~~g~~~~~~~~~~~l-g~~~g~~l~G~i~~~~g-~~~~~~~~~~~~~ 381 (393)
T PRK15011 305 PAILLGLQLLNAIYIGILGGIGMLYFQDLMP-GQAGSATTLYTNTSRV-GWIIAGSLAGIVAEIWN-YHAVFWFALVMII 381 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CCcchHHHHHHHHHHH-HHHHHHHHHHHHHHHhh-hHHHHHHHHHHHH
Confidence 4433433343434444434444455556555 5699999999888777 88999999999999876 7777776665555
Q ss_pred HHHHHHH
Q 010692 459 LAAGIWF 465 (503)
Q Consensus 459 ~~~~~~~ 465 (503)
++.+...
T Consensus 382 ~~~~~~~ 388 (393)
T PRK15011 382 ATLFCLL 388 (393)
T ss_pred HHHHHHH
Confidence 5444433
No 66
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=4.1e-31 Score=253.51 Aligned_cols=325 Identities=13% Similarity=0.076 Sum_probs=240.9
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.+++|.++.+.+++.+++.+++.++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|++.+
T Consensus 32 ~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~ 111 (394)
T PRK11652 32 ADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGLGTG 111 (394)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHhhhh
Confidence 77789999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+....+..|.+++++|+++.++.+.+..+|..++|.+++.+.+..|||+.|++.+++.++..++..+..||.++.
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~-- 189 (394)
T PRK11652 112 VGGVMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETRPA-- 189 (394)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccCcc--
Confidence 888888889999999999999999999999999999999999999888999999999887776666555555653211
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
++++. +..++++..+++|.++...+..+.....
T Consensus 190 ---~~~~~--------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (394)
T PRK11652 190 ---DARRT--------------------------------------------RVLASYRTLLSNRRFNCYLLMLIGTLAG 222 (394)
T ss_pred ---ccchh--------------------------------------------HHHHHHHHHHcChHHHHHHHHHHHHHHH
Confidence 00000 0014456677888887666655555555
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHH-HHHHHHHHHHHHHHH--hh
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLS-AATFLGAISCLTAFC--LS 377 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~--~~ 377 (503)
...+..+.+.++++..+.++... .+.....++.+++.++.+++.||.+++ .... ............... ..
T Consensus 223 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 297 (394)
T PRK11652 223 IAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPNKRFSTL-----MWQSVICCLLAGLLMWIPGWFGVM 297 (394)
T ss_pred HHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 55556677888888778776443 333444555666666677777766632 2221 222222222111111 12
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 442 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 442 (503)
+.+......++.+.+.+...+.......+..| +.+|++.++.+....+ |..+++.+.+.+.+.
T Consensus 298 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~l-g~~~~~~~~~~~~~~ 360 (394)
T PRK11652 298 NVWTLLVPAALFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNI-GSGLAALLSAMLPQT 360 (394)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHH-HHHHHHHHHHHccCC
Confidence 33444555566666666777777777777664 6789999999877777 888888888877654
No 67
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=8.9e-31 Score=247.51 Aligned_cols=331 Identities=14% Similarity=0.057 Sum_probs=240.8
Q ss_pred CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
..+.+|.+++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.+.+ .+++++.+++.|++.
T Consensus 19 ~~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~ 97 (355)
T TIGR00896 19 VGPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALI 97 (355)
T ss_pred CcccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHH
Confidence 3445588899999999999999999999999999999999999999999999999998888887 788999999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHHHHHHHHhccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVIKP 214 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~~p 214 (503)
|++.+...+....++.|++| ++|++++++++.+.++|..+++.+++.+.+.. +||+.|.+.+++.++... ...|
T Consensus 98 g~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~---~~~~ 173 (355)
T TIGR00896 98 GVGIAIINVLLPSLIKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALL---AWIP 173 (355)
T ss_pred HHHHHHHhccchHHHHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHH---HHhh
Confidence 99999888888889999986 57999999999999999999999998887654 399999887765433322 2234
Q ss_pred cccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHH
Q 010692 215 LQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLG 294 (503)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (503)
+..++ +++.+.. +. ...++++|+|.++...+.
T Consensus 174 ~~~~~---~~~~~~~-------------------------------~~--------------~~~~~~~~~~~~~~~~~~ 205 (355)
T TIGR00896 174 QVRRR---VAANQTT-------------------------------TR--------------LTPVRIWRSPLAWQVTVF 205 (355)
T ss_pred hhccc---cCCCCCC-------------------------------CC--------------CCCchhhcCHhHHHHHHH
Confidence 32111 0000000 00 112345677888776666
Q ss_pred HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHH
Q 010692 295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 373 (503)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (503)
.++....+.....|+|.|+++ .+.+.... .+.+...++.++++++.|++.||+++|+ ..+.....+..+..+..
T Consensus 206 ~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~----~~~~~~~~~~~~~~~~~ 280 (355)
T TIGR00896 206 FGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPALARRVKDQR----GIVAVLAVLQLVGLCGL 280 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccch----HHHHHHHHHHHHHHHHH
Confidence 666666777778899999987 46665443 4556778899999999999999995542 34434333333333323
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-CCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692 374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 447 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 447 (503)
....+..... ...+.+++.+...+.......+..+ ++.++...++.+...+. +..++|.+.|++.|..|+|.
T Consensus 281 ~~~~~~~~~~-~~~l~g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~gp~~~G~l~~~~g~~~ 353 (355)
T TIGR00896 281 LFAPMHGLWA-WALVLGLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYL-LAALGPLFVGVLHDISGNWL 353 (355)
T ss_pred HHhhhhHHHH-HHHHHHHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcccC
Confidence 2222222222 3445566666666655555555444 46778889988777777 77789999999999888653
No 68
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.3e-30 Score=243.97 Aligned_cols=388 Identities=14% Similarity=0.118 Sum_probs=260.2
Q ss_pred hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh---hHHHHHHHHHHHHHhhhhhhhhchhhhh
Q 010692 75 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS---FDFWSIAICRMLVGVGEASFISLAAPFI 151 (503)
Q Consensus 75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~g~~~~~~~~~~~i 151 (503)
.+.+++++.+|.++|+...|+++||+|||..+.++.++..++.++..++ +++..++++|++.|+..|.......-++
T Consensus 62 wS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmyl 141 (485)
T KOG0569|consen 62 WSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMYL 141 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 4778899999999999999999999999999999999888888877665 7889999999999999999999999999
Q ss_pred hccCCCCCchhHHHHHHhHHhHHHHHHHHHHH--hhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccc
Q 010692 152 DDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG--VVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQ 229 (503)
Q Consensus 152 ~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~--~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 229 (503)
.|..|.+.||....+.+.+..+|..++..++. .+.+...|++.+.+..+++++..+... +.||+++..-..+.++..
T Consensus 142 ~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~-~~PESPk~Ll~~k~~~~~ 220 (485)
T KOG0569|consen 142 TEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLP-FLPESPKYLLIKKGDEEE 220 (485)
T ss_pred hhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHh-cCCCCcchHHHHcCCHHH
Confidence 99999999999999999999999999988773 444566799999999988776666544 458887654321111100
Q ss_pred cccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHH-----HHHHHHHHHhhh
Q 010692 230 VVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNV-----LGYIAYNFVIGA 304 (503)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 304 (503)
.+...+..+..++.++..++..++.++++.+++ ...+++++++++..+.-. +.......+.+.
T Consensus 221 -A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~-----------~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~a 288 (485)
T KOG0569|consen 221 -ARKALKFYRGKEDVEAEIEEMLREIEEEELEKK-----------KQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINA 288 (485)
T ss_pred -HHHHHHHHhCCCcchhHHHHHHHHHHHhccccc-----------cCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcce
Confidence 000011112222111111111111111111100 013456666665554432 222333444566
Q ss_pred hhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----hhH
Q 010692 305 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSL 379 (503)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 379 (503)
..+|...++.+ .|.+.... ......+....+..+++.++.||.||| ++++.+..++.+..+++... +..
T Consensus 289 i~~Yst~i~~~-aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRR-----pLll~~~~~~~~~~~~~~~~~~l~~~~ 362 (485)
T KOG0569|consen 289 IFFYSTSIFKT-AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRR-----PLLLISLSLMAVALLLMSIALFLSNSF 362 (485)
T ss_pred eHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66777777766 45665444 555677888999999999999999999 67766665555444333222 111
Q ss_pred --H---HHHHHHHHHHHHHhhccchhhHH-hhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692 380 --Y---GFLALFTVGELLVFATQAPVNYV-CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 453 (503)
Q Consensus 380 --~---~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 453 (503)
| ..++..++..+.++.+.+|+.+. .+|.+|++.|+.+.++.....+. ..++-...+..+.+..|. ..|+.+
T Consensus 363 ~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~-~~fiv~~~fp~l~~~~g~--~~filF 439 (485)
T KOG0569|consen 363 GSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWL-SNFIVGFAFPPLQNVIGP--YVFILF 439 (485)
T ss_pred hhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcc--hhhHHH
Confidence 1 23445555555666665555554 55777789999999999988888 767677788888888885 344444
Q ss_pred HHHHHHHHHHHHHHHHhcc-cccccccccccccc
Q 010692 454 TSIFFLAAGIWFVGIFLKS-IDKFNEDGENQISL 486 (503)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 486 (503)
.+..++ ...+.++++|+ |+|+.+|+.++.++
T Consensus 440 ~i~~~~--~~i~~~~~lPETkgr~~~eI~~~~~~ 471 (485)
T KOG0569|consen 440 VIPLAI--FLIYLYRYLPETKGRTPYEIIEELEK 471 (485)
T ss_pred HHHHHH--HHHHHHHhCcccCCCCHHHHHHHHHh
Confidence 444332 33334456775 88887776655443
No 69
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=1e-30 Score=247.47 Aligned_cols=324 Identities=22% Similarity=0.313 Sum_probs=275.3
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
+.+.+++|.+..+.+++.+.+.++..+++++.|+++||+|||+.+..+.++..++.++..++++++.+++.|++.|++.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~ 102 (352)
T cd06174 23 PLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGLGGG 102 (352)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHcccc
Confidence 66678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFA 221 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~ 221 (503)
...+...+++.|++|+|+|++.+++.+....+|..+++.+++.+.+..+||+.+++.+++.++..+...+..
T Consensus 103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 174 (352)
T cd06174 103 ALYPAAAALIAEWFPPKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL-------- 174 (352)
T ss_pred cccHhHHHHHHHhCCccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH--------
Confidence 999999999999999999999999999999999999999999999888999999999887776665544321
Q ss_pred cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 222 PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFV 301 (503)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (503)
|.++...+..++....
T Consensus 175 ----------------------------------------------------------------~~~~~~~~~~~~~~~~ 190 (352)
T cd06174 175 ----------------------------------------------------------------RLLLLLALAFFLLSFG 190 (352)
T ss_pred ----------------------------------------------------------------HHHHHHHHHHHHHHhH
Confidence 3455566666777777
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHH-HHHHHHHHHHHHHHHHHHhhhH
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFK-LLSAATFLGAISCLTAFCLSSL 379 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 379 (503)
......+.|.+..+..+.+.... .......++..++.++.+++.||+++| + .+..+..+..+........++.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~i~~~~~~~~~~~ 265 (352)
T cd06174 191 YYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRR-----RLLLLIGLLLAALGLLLLALAPSL 265 (352)
T ss_pred HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-----hHHHHHHHHHHHHHHHHHHHhccH
Confidence 88888899999988767675544 555677788999999999999999998 6 6666666666655555555566
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 459 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 459 (503)
+.......+.+.+.+...+.......+..|+++|++..|+.+...+. |..++|.+.|.+.|..+ ++..+.+.+++.++
T Consensus 266 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~~~i~g~l~~~~~-~~~~~~~~~~~~~i 343 (352)
T cd06174 266 ALLLVALLLLGFGLGFAFPALLTLASELAPPEARGTASGLFNTFGSL-GGALGPLLAGLLLDTGG-YGGVFLILAALALL 343 (352)
T ss_pred HHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhcccC-cchHHHHHHHHHHH
Confidence 66677777788888888888999999999999999999999988888 88899999999998765 77777777777666
Q ss_pred HHHHH
Q 010692 460 AAGIW 464 (503)
Q Consensus 460 ~~~~~ 464 (503)
+.+..
T Consensus 344 ~~i~~ 348 (352)
T cd06174 344 AALLL 348 (352)
T ss_pred HHHHh
Confidence 55543
No 70
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.98 E-value=9.6e-31 Score=248.90 Aligned_cols=326 Identities=17% Similarity=0.126 Sum_probs=230.0
Q ss_pred cccccc-cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHH
Q 010692 58 PSWFTP-KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRML 135 (503)
Q Consensus 58 ~~~~~~-i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l 135 (503)
++++|. +++++|+|+.+.+++.+++.+++.+++++.|+++||+|||+.++++.++.+++.+++++++ +++.+++.|++
T Consensus 21 ~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 100 (366)
T TIGR00886 21 SPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLF 100 (366)
T ss_pred HHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 333364 6899999999999999999999999999999999999999999999999999999999999 99999999999
Q ss_pred HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC----------cchhHHHH-HHHHHHHHH
Q 010692 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAF-WGEAILMLP 204 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f-~~~~~~~~~ 204 (503)
+|++.+. .+...+++.|++|+++|++++++.....++|..+++.+++.+.. ..+||+.| +..+++..+
T Consensus 101 ~g~~~~~-~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 179 (366)
T TIGR00886 101 IGIAGGS-FASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLL 179 (366)
T ss_pred HHHhchh-hHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHH
Confidence 9998664 56678999999999999999999998888888888877766553 34899999 444655555
Q ss_pred HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692 205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 284 (503)
Q Consensus 205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (503)
..++.+...+|.++..++ +++.. .... ... .+ + ...+..++.++
T Consensus 180 ~~~~~~~~~~~~~~~~~~--~~~~~----------~~~~----~~~------~~--~------------~~~~~~~~~~~ 223 (366)
T TIGR00886 180 PALLIFFVGADTPPGKPA--TGKLS----------FKGA----RWS------VG--T------------GALGDQLKVFR 223 (366)
T ss_pred HHHHHHHhcccCCccccc--chhcc----------cccc----ccc------cc--c------------hhHHHHHHHHh
Confidence 555555555543321100 00000 0000 000 00 0 00013445677
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (503)
+|.++...+..++.......+..+.|.|+++.++.++... .+..+..+..+++.++.+++.||+++| +......
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~-----~~~~~~~ 298 (366)
T TIGR00886 224 DRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSKVTAGAYASLGGLLGSLARPLGGAISDRLGGA-----RKLLMSF 298 (366)
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhhccchHHHhhccc-----hhHHHHH
Confidence 8888887777776666777788899999998888876544 455667778889999999999999987 3333222
Q ss_pred HHHHH-HHHHHHHhh---hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 364 FLGAI-SCLTAFCLS---SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 364 ~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
..... ..++..... +.+.......+...+.+...+.......+.. |+++|+++|+.+...++
T Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~ 364 (366)
T TIGR00886 299 LGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTFALVPHIF-RRATGAVSGLVGAIGNL 364 (366)
T ss_pred HHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhhhcchhhc-hhhcccHHHHHHHhccC
Confidence 22222 222222222 3444444444555555666666666666655 47899999998877665
No 71
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.98 E-value=3.1e-30 Score=245.68 Aligned_cols=340 Identities=12% Similarity=0.004 Sum_probs=255.1
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhH----HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI----GVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
|.+.+|+|.|.+++|++.+++.+...++++++|+++||+|||+.. ..+..+..+ ..+..+++++.+++.|+++|
T Consensus 28 ~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l~~ 105 (382)
T TIGR00902 28 PAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGLFA 105 (382)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHHHH
Confidence 666789999999999999999999999999999999999985433 222222222 24456789999999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
.+.+...|...++..++ +++|+++++......++|.+++|++++.+.+.+|||..|++.++... ..++.+...|+.+
T Consensus 106 ~~~~~~~p~~~al~~~~--~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~-~~~~~~~~~~~~~ 182 (382)
T TIGR00902 106 LFFSAGMPIGDALANTW--QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLA-FMLIGFLIKPTIP 182 (382)
T ss_pred HHHccchhHHHHHHHHH--HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHH-HHHHHHHcCCCCC
Confidence 99888889888887765 46789999999999999999999999999999999999988765532 2222233222211
Q ss_pred CCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH
Q 010692 218 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 297 (503)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (503)
++ ++.+.. + .+ ..++.++++|+|+++...+..++
T Consensus 183 ~~----~~~~~~---~-------------------------~~--------------~~~~~~~~l~~~~~~~~l~~~~l 216 (382)
T TIGR00902 183 PK----DAIPED---E-------------------------SQ--------------GDSAFIALLKNPMNLRFLAAVCL 216 (382)
T ss_pred CC----cccccc---c-------------------------cc--------------cchhHHHHHcChHHHHHHHHHHH
Confidence 10 000000 0 00 01335678899999998888888
Q ss_pred HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692 298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 376 (503)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
.......+..+.|.|+++ .|.++... ....+..++.+++.++.+++.||++.| +.+..+.+...+........
T Consensus 217 ~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~-----~~l~~~~~~~~~~~~~~~~~ 290 (382)
T TIGR00902 217 IQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSAR-----DLLLISAIACVGRWAIIGAI 290 (382)
T ss_pred HHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHH-----HHHHHHHHHHHHHHHHHHhH
Confidence 778888888899999987 67776444 334456677788888888999999887 67777777666666666666
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
++.+..+...++-++..+...+....++.+. |+++++++.++.+.....+|..++|.+.|++.|..| + ..|...+++
T Consensus 291 ~~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g-~-~~~~~~~~~ 367 (382)
T TIGR00902 291 EAFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLG-A-GTFVFMAII 367 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-H-HHHHHHHHH
Confidence 7777777778888888888888888888877 888899999998755444488999999999999987 4 556666666
Q ss_pred HHHHH
Q 010692 457 FFLAA 461 (503)
Q Consensus 457 ~~~~~ 461 (503)
.+++.
T Consensus 368 ~~~~~ 372 (382)
T TIGR00902 368 AAAAF 372 (382)
T ss_pred HHHHH
Confidence 55443
No 72
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=99.98 E-value=5.5e-31 Score=231.89 Aligned_cols=348 Identities=15% Similarity=0.058 Sum_probs=257.5
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692 66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 145 (503)
Q Consensus 66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~ 145 (503)
++.+-+++++|++.+.+.+...+.+++.|.+.||+|+|..+++|++++..+++++++.++++.++++|.+||+|.+...+
T Consensus 99 ~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~t 178 (464)
T KOG3764|consen 99 ISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADT 178 (464)
T ss_pred cCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHh
Confidence 34555778999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhccCCCCC-chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCccc
Q 010692 146 LAAPFIDDNAPVPQ-KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAE 224 (503)
Q Consensus 146 ~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 224 (503)
++.++++|.+|+++ |++++|+.-.+.++|.++||+.||.+.+..|.+.+|++.+++.++-..+.++..+.+..+.+ +
T Consensus 179 sglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~--~ 256 (464)
T KOG3764|consen 179 SGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPD--S 256 (464)
T ss_pred hhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcc--c
Confidence 99999999999764 79999999999999999999999999999999999999999999999888888743211100 0
Q ss_pred ccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhh
Q 010692 225 SGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGA 304 (503)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (503)
..+ . .++++++++|..+.........+.....
T Consensus 257 ~~~-~-----------------------------------------------~~~~~Ll~dP~I~~~agai~~~n~~laf 288 (464)
T KOG3764|consen 257 TEQ-G-----------------------------------------------TPMWSLLMDPYILLIAGAITFSNSSLAF 288 (464)
T ss_pred ccc-C-----------------------------------------------ccHHHHHhCchHhhhhcchhhccchHHH
Confidence 000 0 3467888999888777655555555555
Q ss_pred hhccccchhhhhcccchhhHHHH-HhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 010692 305 YSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 383 (503)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (503)
..-.++.+..+....+.....+. ....+...++..+.|.+.||++..+ +.....+.++...........++...++
T Consensus 289 LePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~---wl~~~~gl~~~G~~~~~iP~~~~~~~L~ 365 (464)
T KOG3764|consen 289 LEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR---WLLSLGGLATVGVSSGPIPFATSIAQLW 365 (464)
T ss_pred hCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh---HHHHHHHHHHHHHHhchhHhhhhHHHHh
Confidence 55566666777666443233333 3445778899999999999999542 0222333333333333333334443333
Q ss_pred HHH---HHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692 384 ALF---TVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 457 (503)
Q Consensus 384 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 457 (503)
+.. ++.+........|......+....+ .-|...++......+ |..+||.++|.+.+..| +.+...+.++..
T Consensus 366 vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sl-a~a~GP~~gg~iv~~iG-F~wl~~iig~~n 443 (464)
T KOG3764|consen 366 VPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSL-AYAIGPTFGGSLVEAIG-FEWLMTIIGILN 443 (464)
T ss_pred hhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHH-hhhccccccchheeehh-HHHHHHHHHHHH
Confidence 333 3333333344445555555544444 668899999877777 99999999999999988 777766666666
Q ss_pred HHHHHHHHHHH
Q 010692 458 FLAAGIWFVGI 468 (503)
Q Consensus 458 ~~~~~~~~~~~ 468 (503)
+.-.-+....+
T Consensus 444 ~iyapvl~ll~ 454 (464)
T KOG3764|consen 444 LIYAPVLLLLR 454 (464)
T ss_pred HHHHHHHHHHH
Confidence 55555554444
No 73
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.97 E-value=2.6e-30 Score=248.68 Aligned_cols=335 Identities=14% Similarity=0.090 Sum_probs=233.9
Q ss_pred CCccchhhHHHH-----HHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHH--------HHHHHHHHH
Q 010692 70 LNNFQDGVLSSA-----FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFW--------SIAICRMLV 136 (503)
Q Consensus 70 ~s~~~~g~~~s~-----~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~l~~~r~l~ 136 (503)
.++++.+.+.+. ..++..+++++.|+++||+|||+++..+.++.+++.++++++++++ .++++|+++
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~ 106 (394)
T TIGR00883 27 SGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAPILLLLARLIQ 106 (394)
T ss_pred CCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHHHHHHHHHHHH
Confidence 455666665443 3334456899999999999999999999999999999999998875 478899999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc--------CcchhHHHHHHHHHHHHHHHHH
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG--------SHLNWRYAFWGEAILMLPFAVL 208 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~--------~~~gwr~~f~~~~~~~~~~~~~ 208 (503)
|++.+...+...+++.|++|+++|++..++.+.+..+|.++++.++..+. +.++||+.|++.+++.++..++
T Consensus 107 G~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~ 186 (394)
T TIGR00883 107 GFSLGGEWGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLVSAVLVLIGLYL 186 (394)
T ss_pred HhhccccccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998876653 3568999999877665543332
Q ss_pred HHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhh-
Q 010692 209 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV- 287 (503)
Q Consensus 209 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 287 (503)
....||.++...++++++ +. ..+.++.++++.
T Consensus 187 -~~~~~~~~~~~~~~~~~~--------------------------------~~--------------~~~~~~~~~~~~~ 219 (394)
T TIGR00883 187 -RRNLEETPVFEKAQEKHK--------------------------------KK--------------RGPIRETLTKHRK 219 (394)
T ss_pred -HHhcCCChhHHHHHhccc--------------------------------cc--------------cCCHHHHHHhchH
Confidence 222333211100000000 00 012233444443
Q ss_pred -HHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692 288 -YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365 (503)
Q Consensus 288 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (503)
++......++..........+.|.|+++..+.++... .......+...++.++.+++.||+++| +.+.....+
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~~ 294 (394)
T TIGR00883 220 PFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRR-----PVLIIFTVL 294 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHHH
Confidence 5555555566666677777889999988777775444 444566778889999999999999988 444332222
Q ss_pred HH-HHH-HHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692 366 GA-ISC-LTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 441 (503)
Q Consensus 366 ~~-~~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 441 (503)
.. ... ...... ++.+......++.+++.+...++....+.+.+|++.|+++.++.+...+..|..++|.+.|++.|
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~ 374 (394)
T TIGR00883 295 AALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVA 374 (394)
T ss_pred HHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHH
Confidence 22 221 111111 23444444555566666677788888999999999999999986555554488889999999999
Q ss_pred hhhhHHHHHHHHHHH
Q 010692 442 HVNNWRKTTLALTSI 456 (503)
Q Consensus 442 ~~g~~~~~~~~~~~~ 456 (503)
..|.+...++....+
T Consensus 375 ~~g~~~~~~~~~~~~ 389 (394)
T TIGR00883 375 MTGDWYAIGYYLAAL 389 (394)
T ss_pred HcCcchhHHHHHHHH
Confidence 887555544444433
No 74
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1.4e-29 Score=224.93 Aligned_cols=348 Identities=16% Similarity=0.121 Sum_probs=276.0
Q ss_pred CchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHH
Q 010692 37 PPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFA 116 (503)
Q Consensus 37 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~ 116 (503)
..++...++.++.....+ .++|.+++.|++|..|.+++..+++.++.+++++.|++.+|+|+|+.++.|+.+++++
T Consensus 16 v~~t~lFfl~G~~~~l~d----iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg 91 (422)
T COG0738 16 VLLTSLFFLWGFITCLND----ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVG 91 (422)
T ss_pred HHHHHHHHHHHHHhhcch----hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 334444555555333333 3447779999999999999999999999999999999999999999999999999999
Q ss_pred HHHhh---hhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-----
Q 010692 117 TAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----- 188 (503)
Q Consensus 117 ~~~~~---~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~----- 188 (503)
..+.. ...+|..++.+-++.|.|.+...+..+.++....++++..+.+++.+..+++|.++||++++.+..+
T Consensus 92 ~~lF~pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~ 171 (422)
T COG0738 92 AALFWPAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALT 171 (422)
T ss_pred HHHHhhhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhc
Confidence 99985 5578899999999999999999999999999999998899999999999999999999999987752
Q ss_pred --------------chhHHHHHHHHHHHHHHHHHHHhcc-ccccCCCCcccccccccccccccCcccCCCCCccccccch
Q 010692 189 --------------LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISD 253 (503)
Q Consensus 189 --------------~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (503)
..||++|...+...++..+...... |+.... .+++.+..
T Consensus 172 ~~~~~~~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k~p~~~~~--~~~~~~~~------------------------ 225 (422)
T COG0738 172 MSAAQILAIKGADASSVQFPYLILAGLLVLLAVLILLSKLPDLQVA--APSLGASG------------------------ 225 (422)
T ss_pred cCHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhccCCcCCcc--cccccccc------------------------
Confidence 2488889888877666665554443 321111 00000000
Q ss_pred hhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhh
Q 010692 254 QASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIV 332 (503)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 332 (503)
+ ....+++++|+++...++.+++.........|++.|+.+..+.+..+. ...+..++
T Consensus 226 --------------------~--~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~~aa~~~s~~~~ 283 (422)
T COG0738 226 --------------------S--AGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQQAAYYLSFFWV 283 (422)
T ss_pred --------------------c--chHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHHH
Confidence 0 135678899999999999999999999999999999999878776555 56678889
Q ss_pred hhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCC
Q 010692 333 CGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSL 412 (503)
Q Consensus 333 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 412 (503)
+.++|++++.++..|+... +.+....+.....++.....++ ...+....+.+.+.+..+|...+...+..+ ++
T Consensus 284 ~~~vGRFig~~lm~~~~~~-----k~Laf~a~~~ill~~~~~l~~g-~v~~~~l~~ig~F~simfPTIfslal~~l~-~~ 356 (422)
T COG0738 284 GFMVGRFIGSALMSRIKPE-----KYLAFYALIAILLLLAVALIGG-VVALYALFLIGLFNSIMFPTIFSLALKNLG-EH 356 (422)
T ss_pred HHHHHHHHHHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHhcC-hHHHHHHHHHHHHhHHHHHHHHHHHHhccC-cc
Confidence 9999999999999999887 7777777777766666666666 344455666778889999999999999998 44
Q ss_pred chhHHHHHHHHHhhcccccchhhHHHHHhhhhh
Q 010692 413 RALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 445 (503)
Q Consensus 413 ~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 445 (503)
...+.++. +..++|+++-|++.|++.|..|.
T Consensus 357 ts~~s~~l--~maivGGAiiP~l~G~i~d~~g~ 387 (422)
T COG0738 357 TSVGSGLL--VMAIVGGAIIPPLQGVIADMFGI 387 (422)
T ss_pred ccccceee--eeheecchHHHHHHHHHHHhhhh
Confidence 55555554 44455888899999999999884
No 75
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=99.97 E-value=2.1e-29 Score=248.27 Aligned_cols=393 Identities=15% Similarity=0.135 Sum_probs=259.5
Q ss_pred chhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhc
Q 010692 74 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 153 (503)
Q Consensus 74 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 153 (503)
+.+++.+.+.++..+++++.|+++|++|||+.++++.+++.++++++++++|++.++++|+++|+|.|......+.+++|
T Consensus 90 ~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~sE 169 (513)
T KOG0254|consen 90 RQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYISE 169 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHhh
Confidence 45899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHhccccccCCCCccccccccccc
Q 010692 154 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA 232 (503)
Q Consensus 154 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 232 (503)
..|++.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. .++.||++++.-+..+.+.. +
T Consensus 170 iap~~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a--~ 246 (513)
T KOG0254|consen 170 IAPAHIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEA--K 246 (513)
T ss_pred cCChhhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHH--H
Confidence 99999999999999999999999996666655443 58999999999998888888 77778877654332211111 0
Q ss_pred ccccCcccCC--CCCccccccchhhhhhhhcccchhhhhhhhhchHHHHH-HHhhhhhHHHHHHHHHHHHHHhhhhhccc
Q 010692 233 SVSEGSEASN--LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK-VLLQEKVYVVNVLGYIAYNFVIGAYSYWG 309 (503)
Q Consensus 233 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (503)
.....+.... +.+++.+++......+...... +..+.++. ...+++.+....+..+.+..+.+...+|.
T Consensus 247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~ 318 (513)
T KOG0254|consen 247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEG--------KASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYS 318 (513)
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccc--------cccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeeh
Confidence 0011111100 0001111111000000000000 00011111 12233445555565666667778888899
Q ss_pred cchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh------------
Q 010692 310 PKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------ 377 (503)
Q Consensus 310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 377 (503)
+.+++..+..++. .....+.++..+++.+++.++.||+||| ++++.+.....+..++.....
T Consensus 319 ~~if~~~g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr-----~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~ 392 (513)
T KOG0254|consen 319 TTIFKSAGLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRR-----KLLLFGAAGMSICLVILAVVGVFALYYPNSSKG 392 (513)
T ss_pred HHHHHhcCCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHhHHHHHHHHHHHHHHHHHhccCCCcccc
Confidence 9888775544433 4444566677788888889999999998 666655555444443332211
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHh-hcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVC-LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
..+..++..++....+...+.+..+.+ .|.+|.+.|+.+.++.....+.....+ ......+.+..+ ....|..++..
T Consensus 393 ~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp~~~r~~~~s~~~~~n~~~~~~v-~~~~~~~~~~~~-~~~~f~~f~~~ 470 (513)
T KOG0254|consen 393 AGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFPLRLRSKGASLAVAVNWLWNFLI-SFFFPFITEALG-IGGTFGYFGGI 470 (513)
T ss_pred hhHHHHHHHHHHHHHHhcccccchhhhhhccCcHhHHhhhHHHHHHHHHHHHHHH-HHHHHHHHHhcc-ccchHHHHHHH
Confidence 123444555555556666777777755 566666999999999988888855444 434444444432 12344444444
Q ss_pred HHHHHHHHHHHHHhc-ccccccccccccccc
Q 010692 457 FFLAAGIWFVGIFLK-SIDKFNEDGENQISL 486 (503)
Q Consensus 457 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 486 (503)
..+.... +...+.| +|+++.|++++...+
T Consensus 471 ~~~~~~~-fv~~~~pETkg~sleei~~~~~~ 500 (513)
T KOG0254|consen 471 CLLSLII-FVFFFVPETKGLTLEEINELFEE 500 (513)
T ss_pred HHHHHHH-HheEEcccCCCCcHHHHHHHHHc
Confidence 3333331 2222445 488888877765443
No 76
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.97 E-value=5.4e-29 Score=237.28 Aligned_cols=337 Identities=12% Similarity=0.033 Sum_probs=239.3
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCc----hhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF----RLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
|.+.+|+|.|.+++|++.+++.++..++++++|++.||+||| +.+.++..+. .......++++|.+++.|++.|
T Consensus 28 ~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l~g 105 (382)
T PRK11128 28 SVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGLFN 105 (382)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHHHH
Confidence 555688999999999999999999999999999999999994 3333222222 2233444688999999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
++.+...+...+++.++ .++|+++++......++|..+||++++++.+++|||..|++.++..++..+ ..+..||..
T Consensus 106 ~~~~~~~~~~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~-~~~~~~~~~ 182 (382)
T PRK11128 106 LFFSPLVPLTDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLL-GQLLRPTIM 182 (382)
T ss_pred HHHcccccHHHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHH-HHHccCCCC
Confidence 99988888888888877 355888999999999999999999999999999999999988765444333 333334321
Q ss_pred CCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHH
Q 010692 218 KGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIA 297 (503)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (503)
+ ++++++. . + +...++++++|+|.++...+..++
T Consensus 183 ~----~~~~~~~----------------------------~--~------------~~~~~~~~i~~~~~~~~~~~~~~l 216 (382)
T PRK11128 183 P----QGESRQQ----------------------------E--S------------AGWPAWKALLKEPTVWRFLLCVSL 216 (382)
T ss_pred C----ccccccc----------------------------c--c------------cccchHHHHHcChhHHHHHHHHHH
Confidence 1 0000000 0 0 001346678899999988777776
Q ss_pred HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692 298 YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 376 (503)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
..........+.|.|+.+ .|.++... .+..+..+..++..++.+++.||+++| +.+..+.....+..+.....
T Consensus 217 ~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~-----~~l~~~~~~~~~~~~~~~~~ 290 (382)
T PRK11128 217 LQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSAR-----DLLLLSAICGVVRWGLMGST 290 (382)
T ss_pred HHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH-----HHHHHHHHHHHHHHHHHHhh
Confidence 666666677777888866 56665433 333455667777888899999999887 56555555555544444455
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
++.+..++..++.+++.+...+....+..+. +++++++..++.+...+..|..++|.+.|.+.|..|. ..++..+++
T Consensus 291 ~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~--~~~~~~~~~ 367 (382)
T PRK11128 291 TALPWLIVIQILHCGTFTVCHLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA--GVFWVMALV 367 (382)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH--HHHHHHHHH
Confidence 6666666667777777776666666666664 5666788888886555444778899999999999873 345554444
Q ss_pred HH
Q 010692 457 FF 458 (503)
Q Consensus 457 ~~ 458 (503)
.+
T Consensus 368 ~~ 369 (382)
T PRK11128 368 AL 369 (382)
T ss_pred HH
Confidence 33
No 77
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.97 E-value=3.2e-29 Score=271.45 Aligned_cols=344 Identities=14% Similarity=0.009 Sum_probs=245.7
Q ss_pred ccccCCCc-cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHH---HHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 65 RGDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGV---GLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 65 ~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
..+.+.+. ...++..+++.++++++++++|+++||+|||+++.. ..++..+..+.+...++++.++++|+++|++.
T Consensus 43 ~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~ 122 (1140)
T PRK06814 43 SGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHS 122 (1140)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 44444433 346888999999999999999999999999997533 22333333333444589999999999999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
+...|+..+++.+++++++|++++++.+++.++|.++||++++++....+|++.|+..++..++ .+++.+..|+.....
T Consensus 123 a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 201 (1140)
T PRK06814 123 ALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVL-GWLASLFIPKTGNAA 201 (1140)
T ss_pred HhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH-HHHHHhhCCCCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999555444443 333444444422110
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 300 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (503)
++..... ...++....++.+.+++.++...+..++..+
T Consensus 202 --~~~~~~~----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (1140)
T PRK06814 202 --PDLKIDR----------------------------------------NIIRSTITLLKYAKADKRIWLAILGISWFWL 239 (1140)
T ss_pred --CCCeecc----------------------------------------chHHHHHHHHHHHhcCchHHHHHHHHHHHHH
Confidence 0000000 0001112456778899999998888777777
Q ss_pred HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH----
Q 010692 301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC---- 375 (503)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 375 (503)
....+..++|.|+++.++.++... .+.+...++.++|.++.+++.|+..++. .......+.++....+...
T Consensus 240 ~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~ 315 (1140)
T PRK06814 240 VGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLL----YVPIGALLMGLFGLDLAFASSSV 315 (1140)
T ss_pred HHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeee----eehHHHHHHHHHHHHHHhccccc
Confidence 777888899999999888876544 4556777889999999999998766552 2222222222211111110
Q ss_pred ---------------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692 376 ---------------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 440 (503)
Q Consensus 376 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 440 (503)
..+.+..++..++.+++.+...++..+++.+..|++.+|+++|+.++...+ +..+++.+.|.+.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~-~~~ig~~~~g~l~ 394 (1140)
T PRK06814 316 PAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAA-FMVAGTIILALLQ 394 (1140)
T ss_pred ccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHH-HHHHHHHHHHHHH
Confidence 134455556666677777777888899999999999999999999988777 8888999999887
Q ss_pred hhhhhHHHHHHHHHHH
Q 010692 441 DHVNNWRKTTLALTSI 456 (503)
Q Consensus 441 ~~~g~~~~~~~~~~~~ 456 (503)
+...++...+++.+.+
T Consensus 395 ~~~~~~~~~~~~~~~~ 410 (1140)
T PRK06814 395 ALGFSIPWIILFIALA 410 (1140)
T ss_pred HhccCHHHHHHHHHHH
Confidence 6544454555444433
No 78
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.97 E-value=2.4e-29 Score=243.06 Aligned_cols=349 Identities=16% Similarity=0.089 Sum_probs=223.5
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---hhhH-----HHHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFD-----FWSIAICRMLV 136 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~-----~~~l~~~r~l~ 136 (503)
.+++|++..+.|++.+++.++..++++++|+++||+|||++++++..+.+++..... .++. +...++++++.
T Consensus 38 ~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 117 (420)
T PRK09528 38 HDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYL 117 (420)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 667999999999999999999999999999999999999999887766655543221 1111 11122233333
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
|.+.....+....+..+ . .+++++.++......++|..++|++++.+.+ .+|++.|++.++++++..++.++..|+.
T Consensus 118 ~~~~~~~~~~~~~~~~~-~-~~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 194 (420)
T PRK09528 118 GFGFLAGAGAIEAYIER-V-SRRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKPDA 194 (420)
T ss_pred hhhhccchhhhhhHHHH-H-HhhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccccc
Confidence 33333223333333222 2 2457788899999999999999999999876 4899999998888777666655554432
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
+++. +.+++. + ++++ +...++.+..+|+|.++...+...
T Consensus 195 ~~~~---~~~~~~-------------------~--------~~~~-----------~~~~~~~~~~l~~~~~~~l~l~~~ 233 (420)
T PRK09528 195 PSTA---KVANAL-------------------G--------ANAS-----------AVSLKDALALLKLPKFWFLVLYVI 233 (420)
T ss_pred cchh---hhccch-------------------h--------cccc-----------cccHHHHHHHccCCCeEeehHHHH
Confidence 1110 000000 0 0000 000133456778888776655444
Q ss_pred HHHHHhhhhhccccchhhhhc---ccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIY---HMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 372 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (503)
...........+.|.|+.+.. +.+.... .+.++..+...++.++.|++.||+++| +.+..+.++..+...+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~-----~~~~~~~~l~~~~~~l 308 (420)
T PRK09528 234 GVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAK-----NALLLAGTIMAVRIIG 308 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcc-----hhhHHHHHHHHHHHHH
Confidence 444444445556677766543 2232222 334555667788999999999999998 5555545544444444
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHH-HHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692 373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 451 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 451 (503)
....++.+..+....+.+...+...+....+..+..|++.+++..+. .+...++ |.+++|.+.|++.|..| |+..|.
T Consensus 309 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~l-g~~ig~~~~G~l~~~~G-~~~~f~ 386 (420)
T PRK09528 309 SGFATGPLEVSILKLLHAFEVPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQL-GAVFLSTLAGNLYDSIG-FQGTYL 386 (420)
T ss_pred HHhcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHH-HHHHHHHHHHHHHHhhC-chHHHH
Confidence 44445555555555555555545555566777888888989888765 4555556 88899999999999887 888888
Q ss_pred HHHHHHHHHHHHH
Q 010692 452 ALTSIFFLAAGIW 464 (503)
Q Consensus 452 ~~~~~~~~~~~~~ 464 (503)
..+++.++..++.
T Consensus 387 ~~~~~~~i~~~~~ 399 (420)
T PRK09528 387 ILGGIVLLFTLIS 399 (420)
T ss_pred HHHHHHHHHHHHH
Confidence 8777655554433
No 79
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.97 E-value=2.6e-28 Score=235.94 Aligned_cols=347 Identities=16% Similarity=0.143 Sum_probs=268.5
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHhhh
Q 010692 66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVGE 140 (503)
Q Consensus 66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~g~ 140 (503)
.+..-|+..++++.++..+...+.++++|.++||++||++++.+.++.++..++.++. .+.|.+++.-++.|++.
T Consensus 38 ~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~ 117 (524)
T PF05977_consen 38 TQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTFLLGIGS 117 (524)
T ss_pred HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHH
Confidence 4556688899999999999999999999999999999999999998887766555443 47889999999999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
+...|+.++++.|..|+++...+.++.+...++..++||.++|.+...+|-.+.|.+.++..++.........++..+.
T Consensus 118 a~~~PA~~A~ip~lV~~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~~~~~~~- 196 (524)
T PF05977_consen 118 AFFNPAWQAIIPELVPKEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWKPPPPPS- 196 (524)
T ss_pred HHHHHHHHHHHHHhccHhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccc-
Confidence 9999999999999999999999999999999999999999999999888999999998876665544443332221000
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNF 300 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (503)
+..++ +..++....++.+.++|.+...++..++++.
T Consensus 197 ---~~~~e-----------------------------------------~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l 232 (524)
T PF05977_consen 197 ---SLPRE-----------------------------------------RFFSALREGLRYVRSSPPLRSVLLRSFLFNL 232 (524)
T ss_pred ---ccchh-----------------------------------------hhhhhHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 00000 1112233556667777877766665555555
Q ss_pred HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692 301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 379 (503)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (503)
....+...+|.+.++..+.++... .+.+..+++.++|.++.+++.+|++++ +++..+.+......+.....++.
T Consensus 233 ~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~-----~lv~~~~~~~a~~~~~lal~~~~ 307 (524)
T PF05977_consen 233 FASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSR-----RLVLLASLLFALALLLLALSPSF 307 (524)
T ss_pred hhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcc-----hhhHHHHHHHHHHHHHHhcchHH
Confidence 555666778999988888876655 455778888899999988888888776 56655665555555666666777
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFL 459 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~ 459 (503)
+...+.+++.|++.........+..++..|++.||+++++.++.... +..+|..+.|.+.+..| ...++.+.++..++
T Consensus 308 ~~~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~~g-~~~lGsll~G~la~~~g-~~~al~~a~~~lll 385 (524)
T PF05977_consen 308 WLALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVFFG-GMPLGSLLWGFLADHFG-VRTALLIAGAALLL 385 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC-HHHHHHHHHHHHHH
Confidence 77777788888888887788888999999999999999999888777 88889999999999887 44566655554444
Q ss_pred HHHHH
Q 010692 460 AAGIW 464 (503)
Q Consensus 460 ~~~~~ 464 (503)
+.++.
T Consensus 386 ~~~~~ 390 (524)
T PF05977_consen 386 SALIA 390 (524)
T ss_pred HHHHH
Confidence 44433
No 80
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=99.97 E-value=5.3e-28 Score=211.47 Aligned_cols=361 Identities=14% Similarity=0.065 Sum_probs=280.3
Q ss_pred HHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh
Q 010692 42 EAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG 121 (503)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~ 121 (503)
...+...|........+++++++++|+|+|.+..|++.++..++..+.+++..+++.|+|.++.+..++++.++|.++-.
T Consensus 16 gIvlia~NLR~~itsvgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~ 95 (395)
T COG2807 16 GIVLIAFNLRPAITSVGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRS 95 (395)
T ss_pred HHHHHHhccchhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHh
Confidence 34445566666666677777999999999999999999999999999999999999999999999999999999999988
Q ss_pred hhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHH
Q 010692 122 SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAI 200 (503)
Q Consensus 122 ~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~ 200 (503)
.. +.+.++.+-.+.|.|.+...+..+.+|.+.||++ -+..++++....++|..+++.+...+.++. |||......++
T Consensus 96 ~~-~~~~L~~gt~l~G~gIav~nVLLPslIK~~Fpk~-~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl 173 (395)
T COG2807 96 LG-GLPLLFLGTLLAGAGIAVINVLLPSLIKRDFPKR-VGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWAL 173 (395)
T ss_pred cc-cHHHHHHHHHHHHhhHHHHHHhhhHHHHhhcccc-hhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHH
Confidence 87 8889999999999999999999999999999876 899999999999999999999999998877 79999999998
Q ss_pred HHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHH
Q 010692 201 LMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTK 280 (503)
Q Consensus 201 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (503)
++++..+.++. ...+.+....+.+. .+-.
T Consensus 174 ~allAl~~WlP---q~~r~~~~~~~~~~------------------------------------------------~~~~ 202 (395)
T COG2807 174 LALLALLIWLP---QALREQAASIATKL------------------------------------------------VSVR 202 (395)
T ss_pred HHHHHHHHHhh---hccccccccccccc------------------------------------------------cccc
Confidence 88777766553 32111100000000 1123
Q ss_pred HHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692 281 VLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 359 (503)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (503)
.++|+|.-|.+.+.+.+....++....|+|.++.|. |.++.. ..+.++..+.+++..+....+.+|...++ .+.
T Consensus 203 ~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~~-G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r----~~~ 277 (395)
T COG2807 203 KVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILIDR-GLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQR----PLV 277 (395)
T ss_pred ccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHHc-CCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccc----hHH
Confidence 578999999999999999999999999999999985 566544 46667888899999999999999855442 444
Q ss_pred HHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhHHhhcccC-CCCchhHHHHHHHHHhhcccccchhhH
Q 010692 360 SAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-PSLRALSMAISTVSIHIFGDVPSSPLV 436 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~g~~~~~~~~ 436 (503)
+....+..+......+.+ ..+.+ .++.|++.+..++.....+..... ++..+.-.|+.+...+++++ +||.+.
T Consensus 278 ~~~~~~~l~G~~G~~~~P~~~~~lw---~~llG~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa-~GP~l~ 353 (395)
T COG2807 278 VLALLLMLVGLVGLLLAPGQLPILW---ALLLGLGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAA-FGPWLF 353 (395)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHH---HHHHhCccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHh-hhhhhH
Confidence 444444433333332322 33333 356666667777766666665544 47788888888888888554 499999
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692 437 GVLQDHVNNWRKTTLALTSIFFLAAGIW 464 (503)
Q Consensus 437 g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 464 (503)
|++.|.+|+|...+...+.+.+...+..
T Consensus 354 G~lhDa~gsw~~~~~~l~~~~i~m~i~G 381 (395)
T COG2807 354 GFLHDATGSWSAPLVLLALATLLMLIFG 381 (395)
T ss_pred hHHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 9999999999888877766655444443
No 81
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=1.3e-28 Score=268.03 Aligned_cols=331 Identities=12% Similarity=0.032 Sum_probs=239.0
Q ss_pred ccccCCCc--cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---hhhHHHHHHHHHHHHHhh
Q 010692 65 RGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SSFDFWSIAICRMLVGVG 139 (503)
Q Consensus 65 ~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~g 139 (503)
..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..++.++.. .+++++.++++|+++|++
T Consensus 37 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 116 (1146)
T PRK08633 37 IKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQ 116 (1146)
T ss_pred HHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHH
Confidence 45566543 4468999999999999999999999999999999998877666655543 457899999999999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc---------chhHHHHHHHHHHHHHHHHHHH
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---------LNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---------~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
.+...++..+++.|++|+++|++++++.+.+..+|.++|+++++++... .+|++.+.+..+...+..++..
T Consensus 117 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1146)
T PRK08633 117 SAIYSPAKYGIIPELVGKENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLGLIFA 196 (1146)
T ss_pred HHhhchHHHhhhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998765 2345555444444333444444
Q ss_pred hccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692 211 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 290 (503)
Q Consensus 211 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (503)
+..|+.+......++.+.. ...+.....++.+++++.++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~----------------------------------------~~~~~~~~~~~~l~~~~~~~~ 236 (1146)
T PRK08633 197 YRLPKVPAAAPEVFDKKKY----------------------------------------LFPKLLWRNLKLLRSDRVLWL 236 (1146)
T ss_pred hcCcCCCCCCccccccccc----------------------------------------ccHHHHHHHHHHHhcCcHHHH
Confidence 4445532211100000000 000111244667788888888
Q ss_pred HHHHHHHHHHHhhhhhccccchhhhhcccchh-hH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHH
Q 010692 291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 368 (503)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (503)
..+..++..........++|.|+.+.++.+.. .. .+.....++.+++.++.+++.||++++ +.+..+.++.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~-----~~~~~~~~~~~~ 311 (1146)
T PRK08633 237 AIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIEL-----GLVPLGALGLAL 311 (1146)
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEc-----cchhHHHHHHHH
Confidence 77766666666667778889999888888765 33 455666788889999999999999876 444444443333
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692 369 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 441 (503)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 441 (503)
..++.....+.+..++..++.+++.+...++...++.+..|++.||+++|+.+.+.++ |.++++.+.+.+..
T Consensus 312 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~l-g~~~~~~~~~~l~~ 383 (1146)
T PRK08633 312 SLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNV-GMLLFLALTTLFSG 383 (1146)
T ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 3334444445555666666777777777778888888989999999999999888877 77766666555543
No 82
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.97 E-value=1.1e-28 Score=227.34 Aligned_cols=363 Identities=10% Similarity=0.011 Sum_probs=248.4
Q ss_pred hhHHHHHHhhhcccCCCCCcccccccccccCCCccc-hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHH
Q 010692 39 PLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQ-DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT 117 (503)
Q Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~-~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~ 117 (503)
+|+..|+..+ -+..|...|.+.+|+|+|++| .|.+.+++..++++++++.|+++||+|.|+++.++.+.+++.+
T Consensus 32 lC~fGF~~e~-----R~n~s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t 106 (511)
T TIGR00806 32 LCFYGFMAQF-----RPGESFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVW 106 (511)
T ss_pred HHHHHHHHHh-----hchHHHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 4555555433 334455567778999999999 9999999999999999999999999999999999999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHH
Q 010692 118 AGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG 197 (503)
Q Consensus 118 ~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~ 197 (503)
++.+++++++.+.+.|++.|++.|... +...++..|+|+++|+++.++..++..+|.++++++++++ ..+|||+-+.+
T Consensus 107 ~L~~fa~Sl~~L~i~R~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~qll-~s~gWr~y~~L 184 (511)
T TIGR00806 107 LLLLLGTSVWHMQLMEVFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQLL-VTLGWISYSTL 184 (511)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCchhHHHH
Confidence 999999999999999999999999999 9999999999999999999999999999999999999994 46799976544
Q ss_pred H--HHHHHHHHHHHHhccccccCCC--CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692 198 E--AILMLPFAVLAFVIKPLQLKGF--APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS 273 (503)
Q Consensus 198 ~--~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (503)
. .+.+...++++.+++|...+.. ++++..+.. ...+.+.....+ . . ......+ .......+
T Consensus 185 n~Isl~s~~~a~~~a~~LP~~~~sl~f~~~~~~~~~----~~~~~~~~~~~~---~--~----~~~~~~~--~~~~~~~~ 249 (511)
T TIGR00806 185 NIISLVFMTFSVFLALFLKRPKRSLFFNRLEDVRGA----LPCELDQMVPGP---G--G----KLEDYLG--TCRDSFLV 249 (511)
T ss_pred HHHHHHHHHHHHHHHHhCCCCchhhhhccccccccc----cccccccCCCCC---c--c----ccchhhh--hhhhHHHH
Confidence 3 2233344444455555322210 010000000 000000000000 0 0 0000000 01113345
Q ss_pred chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch-hhHHHHHhhhhhhhhchhhhhhhhhcccccc
Q 010692 274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-ADMMFGGVTIVCGIVGTISGGFILDQMGATI 352 (503)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 352 (503)
..+.+++...+|+.+....+-+.+...+++.+.+|......+....++ .....-++..+.+.+..+..|++-.+..+.
T Consensus 250 ~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~- 328 (511)
T TIGR00806 250 RMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITYYVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARW- 328 (511)
T ss_pred HHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHHHHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhh-
Confidence 667888888999999888888877777777777766655544322111 111222334445566777788875444221
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 353 SNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
.. ..+.+..++....++++...++.|...+.+.+.........+....-++.....+.-|...|+.++..-+
T Consensus 329 ~~--l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf~~~y~flitia~~~iA~~L~~~~~aLvFGiNtfvAl~ 400 (511)
T TIGR00806 329 SK--LLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLFRGIYQFLVPIATFQIASSLSKELCALVFGINTFVATA 400 (511)
T ss_pred HH--HHHHHHHHHHHHHhhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccceEEEEecHHHHHHH
Confidence 10 3333444455555666666678888888888888888888888888888888778789888887665544
No 83
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.97 E-value=8.9e-28 Score=230.58 Aligned_cols=343 Identities=15% Similarity=0.087 Sum_probs=227.3
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-----CCch-hHHHHHHHHHHHHHHhhhh---hHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFR-LIGVGLSVWTFATAGCGSS---FDFWSIAIC 132 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~l~~~ 132 (503)
|.+-++.|+|.+++|++..+... .+..+++|+++||+ |||| .+.++.++.+++..+.++. ++++.+++.
T Consensus 23 ~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~~~ 100 (402)
T PRK11902 23 QAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLAGL 100 (402)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHHHH
Confidence 33347789999999999777665 59999999999999 8876 7888888888888887776 467888888
Q ss_pred HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-chhHHHHHHHHHHHHHHHHHHHh
Q 010692 133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-LNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
.++.++..+...+...+++.|++|+++|+++.++...+..+|.++++.+++.+.+. .|||..|++.+++.++..+. .+
T Consensus 101 ~~~~~~~~~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~-~~ 179 (402)
T PRK11902 101 AVLVAFLSASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT-TL 179 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH-HH
Confidence 88889888889999999999999999999999999999999999999999998875 59999999998877655543 33
Q ss_pred ccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHH
Q 010692 212 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 291 (503)
Q Consensus 212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (503)
..||+.+. +++++. . .++..+++++++|+|.++..
T Consensus 180 ~~~e~~~~----~~~~~~---------------------~--------------------~~~~~~~~~~l~~~~~~~~~ 214 (402)
T PRK11902 180 WAPEPEVP----ARPPRS---------------------L--------------------GEAVVGPLRDFFSRRGAWAL 214 (402)
T ss_pred hcCCCccc----ccccch---------------------h--------------------HHHHHHHHHHHHhCcCHHHH
Confidence 44542211 000000 0 00012456778899988877
Q ss_pred HHHHHHHHHHhhhhhccccchhhhhcccchhhHHHH-Hhh-hhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692 292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVT-IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
++..++..........+.+.++.+..|.++....+. ... .++.+++.++++++.||+++| +.+........+.
T Consensus 215 l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~-----~~l~~~~~~~~l~ 289 (402)
T PRK11902 215 LLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLY-----RSLMLFGVLQAVS 289 (402)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHH-----HHHHHHHHHHHHH
Confidence 766555544333333344445666678776554332 232 345788999999999999987 4443333332222
Q ss_pred HHHH---HHh-hhHHHHHHHHHH----HHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692 370 CLTA---FCL-SSLYGFLALFTV----GELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 441 (503)
Q Consensus 370 ~~~~---~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 441 (503)
.+.. ... ++.+.......+ .++..+........++.+..| ++..++.+....+ +.+.++.+.|.+.|
T Consensus 290 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l-~~~~~~~~~G~l~~ 364 (402)
T PRK11902 290 NLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSFS----ATQYALLSALASV-GRVYVGPTSGYLVE 364 (402)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCc----HHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 2111 122 233433333322 222233334444444444444 4445555444444 55545668999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHH
Q 010692 442 HVNNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 442 ~~g~~~~~~~~~~~~~~~~~~~ 463 (503)
..| |...|...+.+.+++.++
T Consensus 365 ~~G-~~~~f~~~~~~~~~~~~~ 385 (402)
T PRK11902 365 AYG-WPGFYLMTVVIALPGLAL 385 (402)
T ss_pred HhC-hHHHHHHHHHHHHHHHHH
Confidence 988 767777766665554333
No 84
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.97 E-value=2.5e-28 Score=234.28 Aligned_cols=350 Identities=11% Similarity=0.016 Sum_probs=236.6
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCC-chhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
|.+.+.+.+++|++..|+|++.+++.++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+++.|++.
T Consensus 23 ~~l~~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 102 (418)
T TIGR00889 23 VTLGSYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLAN 102 (418)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 444344578899999999999999999999999999999999965 7788888999989998999999999999999999
Q ss_pred Hhhhhhhhhchhhhhh--------ccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Q 010692 137 GVGEASFISLAAPFID--------DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 208 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~--------~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 208 (503)
|++.+...+...++.. |......|.+.+| .+|.++||.+++.+....+|+ +|++.+++.++..++
T Consensus 103 ~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~ 175 (418)
T TIGR00889 103 SLAYMPTIALTNSISYANLPQAGLDVVTDFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVF 175 (418)
T ss_pred HHHHccHHHHHHHHHHHHHhhcCCCchhcCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHH
Confidence 9987766666555432 2222234555554 478888899988884433455 455666655555543
Q ss_pred HHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhH
Q 010692 209 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY 288 (503)
Q Consensus 209 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (503)
.+..||.++. ++++.. ..+ +....+.+.++|+|.+
T Consensus 176 -~~~~~e~~~~----~~~~~~--------------------~~~--------------------~~~~~~~~~~~k~~~~ 210 (418)
T TIGR00889 176 -ALTLPDIPVA----KSTAKM--------------------SIK--------------------VMLGLDAFILFKNKRM 210 (418)
T ss_pred -HhcCCCCCCC----cccccc--------------------CHH--------------------HHhhhhHHHHhcCCCe
Confidence 3445653211 000000 000 0000123457788888
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhhhhcccch--------hh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692 289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN--------AD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 359 (503)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (503)
+...+..++..........+.|.++++.+ .++ .. ....++..+..+++.+..+++.||+++| +.+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r-----~~l 284 (418)
T TIGR00889 211 AIFFFFSMLLGAPLQITNIFGNGFLHEFG-RNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIK-----KVM 284 (418)
T ss_pred eeHHHHHHHHHhHHHHHHHhHHHHHHHhc-ccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHH
Confidence 77777666665555555566777776643 221 11 2344566678888899999999999998 666
Q ss_pred HHHHHHHHHHHHHHHHhh-h---HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhh
Q 010692 360 SAATFLGAISCLTAFCLS-S---LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 435 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 435 (503)
..+.++..+......... + .+..++..++.+.+.+...+....++.+..|++.|+++.|+.+...+.+|.+++|.+
T Consensus 285 ~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l 364 (418)
T TIGR00889 285 LLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYIL 364 (418)
T ss_pred HHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 666665555443333322 1 233344455566666666667777888999999999999999744443388899999
Q ss_pred HHHHHhhhhh-----HHHHHHHHHHHHHHHHHHHH
Q 010692 436 VGVLQDHVNN-----WRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 436 ~g~l~~~~g~-----~~~~~~~~~~~~~~~~~~~~ 465 (503)
.|++.|..|+ |+..|.+.+++.+++.++..
T Consensus 365 ~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~ 399 (418)
T TIGR00889 365 SGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFM 399 (418)
T ss_pred HHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHH
Confidence 9999998653 77788877766665554443
No 85
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.96 E-value=4.1e-28 Score=232.67 Aligned_cols=348 Identities=13% Similarity=0.054 Sum_probs=233.1
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh---hh-----hHHHHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG---SS-----FDFWSIAICRMLV 136 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~-----~~~~~l~~~r~l~ 136 (503)
.+++|.++.+.|++.+++.++..+++++.|+++||+|||+.++.+....+++..... +. +.+..+++.|++.
T Consensus 30 ~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (396)
T TIGR00882 30 HDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLYL 109 (396)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHH
Confidence 567999999999999999999999999999999999999999887776665443321 11 2334456778889
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
|++.+...+....++.|..+ +++..++......++|.++||++++.+.+ .+||.+|++.+++.++..++.+...|+.
T Consensus 110 g~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 186 (396)
T TIGR00882 110 GFVFSAGAGAIEAYIEKVSR--NSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKPKA 186 (396)
T ss_pred HHHhccchhhHHHHHHHhhh--hcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 98888888888777777533 34567788888889999999999998875 4999999999988887776655544432
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
+++ ++.+.. . + .++++ ...++.++++|+|.++...+..+
T Consensus 187 ~~~----~~~~~~---~---------------~-------~~~~~------------~~~~~~~~~l~~~~~~~~~l~~~ 225 (396)
T TIGR00882 187 PSS----ATVANA---L---------------G-------ANASA------------FSLKLALELFRQRKFWMFVLYVV 225 (396)
T ss_pred chh----hhhhcc---c---------------c-------cccCC------------CCHHHHHHHHcCCcHHHHHHHHH
Confidence 110 000000 0 0 00000 00134567888888877666555
Q ss_pred HHHHHhhhhhccccchhhhhcc---cchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYH---MSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT 372 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (503)
...........+.|.|+.+... .+... .....+..+...++.+..+++.||+++| +.+..+..+..+....
T Consensus 226 ~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~-----~~l~~~~~l~~l~~~~ 300 (396)
T TIGR00882 226 GVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAK-----NALLIAGTIMSVRIIG 300 (396)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc-----hhHHHHHHHHHHHHHH
Confidence 5555555555567777766542 22222 2334455667777888999999999998 5555555444444444
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHH-HHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692 373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI-STVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 451 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 451 (503)
....++.+......++.+.+..........+..+..+++.++++.+. .+....+ |.+++|.+.|++.|..| |+.+|.
T Consensus 301 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~~~~~~~~~~~l-g~~~~~~l~G~l~~~~G-~~~~f~ 378 (396)
T TIGR00882 301 SSFATTALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATIYLIGFQFAKQL-AMIFLSTLAGNMYDSIG-FQGAYL 378 (396)
T ss_pred HHhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEeehHHHHHHHHH-HHHHHHHhHHHHHHhcc-cHHHHH
Confidence 33445555555445555444433333344455566677888877766 4555566 88999999999999887 778888
Q ss_pred HHHHHHHHHHHH
Q 010692 452 ALTSIFFLAAGI 463 (503)
Q Consensus 452 ~~~~~~~~~~~~ 463 (503)
+.+++.++..+.
T Consensus 379 ~~~~~~~i~~~~ 390 (396)
T TIGR00882 379 VLGCIVLLFTLI 390 (396)
T ss_pred HHHHHHHHHHHH
Confidence 877776555443
No 86
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.96 E-value=8.1e-28 Score=227.48 Aligned_cols=311 Identities=13% Similarity=0.073 Sum_probs=227.7
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-----CCchh-HHHHHHHHHHHHHHhhhh---hHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-----NPFRL-IGVGLSVWTFATAGCGSS---FDFWSIAIC 132 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~~~ 132 (503)
|.+.+|+|+|.+++|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++. .+++.+...
T Consensus 12 ~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~l~~~ 89 (356)
T TIGR00901 12 PYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPLLAGL 89 (356)
T ss_pred HHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHHHHHH
Confidence 56679999999999999755 555555 99999999998 89996 567788888877777776 566777888
Q ss_pred HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--------hHHHHHHHHHHHHH
Q 010692 133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAILMLP 204 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~~~~~~~~~ 204 (503)
.++.+++.+...+...+++.|++|+|+|+++.++...+..+|.++++.+++.+.+..| ||..|++.+++.++
T Consensus 90 ~~~~~~~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~ai~~l~ 169 (356)
T TIGR00901 90 AFLIAFFSATQDIALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTALLILP 169 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHHHHHHH
Confidence 8888998888899999999999999999999999999999999999999999988888 99999999987777
Q ss_pred HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692 205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 284 (503)
Q Consensus 205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (503)
..+..++..||..+. ++++ +. . .++..+.++++++
T Consensus 170 ~~~~~~~~~~e~~~~--~~~~-~~-------------------------~-----------------~~~~~~~~~~~~~ 204 (356)
T TIGR00901 170 GLLVTLFLAKEPQED--ASVP-KP-------------------------L-----------------TQAVLKPIREFFQ 204 (356)
T ss_pred HHHHHHHhccCCCcc--cccc-hh-------------------------H-----------------HHHHHHHHHHHHH
Confidence 665555444542110 0000 00 0 0001134556667
Q ss_pred hhh---HHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhh-hhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692 285 EKV---YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVT-IVCGIVGTISGGFILDQMGATISNAFKLL 359 (503)
Q Consensus 285 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (503)
+|. ++...+..++..........+.|.|+++ .|.++... .+.... .+..+++.++++++.||+++| +.+
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~-----~~l 278 (356)
T TIGR00901 205 RKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNIL-----YAL 278 (356)
T ss_pred hcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHH-----HHH
Confidence 665 6666666666677777788899999988 77776554 233333 356778999999999999987 444
Q ss_pred HHHHHHHHHHHHHHHHh-----------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692 360 SAATFLGAISCLTAFCL-----------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 425 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 425 (503)
..+.++..+........ ++.+......++.+++.+...+....+..+..|+++||+..|+.+...+
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 279 LLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 44444443333322221 2234445555566777778888999999999999999999999876554
No 87
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.96 E-value=2.4e-27 Score=231.02 Aligned_cols=330 Identities=15% Similarity=0.116 Sum_probs=239.1
Q ss_pred cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCch-hHHHHHHHHHHHHHHhhhhhH------HHHHHHH
Q 010692 64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAIC 132 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l~~~ 132 (503)
+.+++|+++.++|++.++..+..++..|+.|+++|| +|||| .++.+....+++.+++.+.++ ++.+++.
T Consensus 26 ~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 105 (437)
T TIGR00792 26 YTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYAYIT 105 (437)
T ss_pred HHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHHHHH
Confidence 368899999999999999999999999999999998 67744 677888888888888776653 4667778
Q ss_pred HHHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-------CcchhHHHHHHHHHHHHH
Q 010692 133 RMLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-------SHLNWRYAFWGEAILMLP 204 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-------~~~gwr~~f~~~~~~~~~ 204 (503)
+++.+++.+...+...++..|.. ++++|++..++.+.+..+|..+++.+.+.+. +..+||+.+++.++++++
T Consensus 106 ~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l~~~ 185 (437)
T TIGR00792 106 YILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALIGVV 185 (437)
T ss_pred HHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHHHHH
Confidence 89999999888888888999987 4688999999999999998877766655443 245899999999998887
Q ss_pred HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692 205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 284 (503)
Q Consensus 205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (503)
..++.++..||.++.. +++++. + .+..+.++.+++
T Consensus 186 ~~~~~~~~~~e~~~~~--~~~~~~--------------------------------~-----------~~~~~~~~~l~~ 220 (437)
T TIGR00792 186 SLIICFFGTKERYSEI--PKNIEK--------------------------------K-----------LSLKQIFKALFK 220 (437)
T ss_pred HHHHHHcCCEecCCCC--Cccccc--------------------------------C-----------CCHHHHHHHHhC
Confidence 7777666665532110 000000 0 001245677889
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (503)
+|.++...+..++..........+.+.|.+...+.+.....+..+..++.+++.++.+++.||+++| +.+..+..
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~-----~~~~~~~~ 295 (437)
T TIGR00792 221 NDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLGDPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRK-----ILFAGGIL 295 (437)
T ss_pred CHHHHHHHHHHHHHHHHHHHHcchhheeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHHH
Confidence 9999888777777766666666666666665555333333444556788889999999999999987 55555554
Q ss_pred HHHHHHHHHHHh-hhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhhH
Q 010692 365 LGAISCLTAFCL-SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLV 436 (503)
Q Consensus 365 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~ 436 (503)
+.++..+..... ++.+...+..++.+++.+...+...++..+..+ ++.+|.+.|+.+....+ |..+++.+.
T Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~-g~~lg~~i~ 374 (437)
T TIGR00792 296 LMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKTGVRAEGLVYSVRTFVRKL-GQALAGFLV 374 (437)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhcCccchHHHHHHHHHHHHH-HHHHHHHHH
Confidence 444443333332 334444555566666666666667777776654 45689999999988888 888899999
Q ss_pred HHHHhhhh
Q 010692 437 GVLQDHVN 444 (503)
Q Consensus 437 g~l~~~~g 444 (503)
|++.+..|
T Consensus 375 g~ll~~~G 382 (437)
T TIGR00792 375 GLILGIIG 382 (437)
T ss_pred HHHHHHcC
Confidence 99988755
No 88
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.96 E-value=1.8e-27 Score=228.68 Aligned_cols=374 Identities=12% Similarity=0.063 Sum_probs=240.1
Q ss_pred CcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 57 TPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 57 ~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
....++.+..|+|-+ ....|+.+.+.++.++..++.|+++|.||||++++.+.++..+|.++++.++|...++++..+.
T Consensus 63 ~a~~l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~ 141 (599)
T PF06609_consen 63 PASILPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLY 141 (599)
T ss_pred cHHHHHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHH
Confidence 344447778999864 6889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc-cc
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK-PL 215 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~-p~ 215 (503)
|+|.|... .....++|..|.|.|+...++......+....++.++..+..+-+|||.|++..+...+..++.+++. |.
T Consensus 142 GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP 220 (599)
T PF06609_consen 142 GVGAGVQE-LAALAISELVPNKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPP 220 (599)
T ss_pred HHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99988665 45666999999999998888777776666667888887777777999999999998777766655444 33
Q ss_pred ccCCCCcccccccccccccc---------------cCcc--cCCCCCccccccchh-hhhhhhcccchhhhhhhh---hc
Q 010692 216 QLKGFAPAESGKAQVVASVS---------------EGSE--ASNLNDHVSEDISDQ-ASERSIKSIGESRFLNQL---SQ 274 (503)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~---------------~~~~--~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~ 274 (503)
+.+..+.++..++...++.+ -.++ ......+....+-.. ...-- --..-..++.. ++
T Consensus 221 ~~~~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~--~Lv~F~~wE~~~~~~~ 298 (599)
T PF06609_consen 221 PRAQLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFV--LLVAFVVWEWFGAPKD 298 (599)
T ss_pred chhhhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHH--HHHHHHHhhhhccCCC
Confidence 21111111100000000000 0000 000000000000000 00000 00000000100 11
Q ss_pred hHHHHHHHhhh-hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchh----hHHHHHhhhhhhhhchhhhhhhhhccc
Q 010692 275 FSQDTKVLLQE-KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA----DMMFGGVTIVCGIVGTISGGFILDQMG 349 (503)
Q Consensus 275 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~l~d~~~ 349 (503)
..- ..+++|+ |.+...++..++....++....+.|......++.++. ..........+..+|.++.+.+..+++
T Consensus 299 Pl~-P~~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir 377 (599)
T PF06609_consen 299 PLF-PHRLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIR 377 (599)
T ss_pred CcC-CHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHcc
Confidence 111 2356776 5566666666677777777777888877777666542 123445556677778888889888876
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHH--hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhc
Q 010692 350 ATISNAFKLLSAATFLGAISCLTAFC--LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF 427 (503)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 427 (503)
+-+ ..++.+..+..+++..+.. .++....+.+.++.+++.+....+......-..|++.-|++.|+..++..+
T Consensus 378 ~~K----w~li~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~- 452 (599)
T PF06609_consen 378 HIK----WQLIFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSI- 452 (599)
T ss_pred chh----HHHHHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHH-
Confidence 542 3443444444433222222 234444556677777777776666676777778889999999999777776
Q ss_pred ccccchhhHHHHH
Q 010692 428 GDVPSSPLVGVLQ 440 (503)
Q Consensus 428 g~~~~~~~~g~l~ 440 (503)
|+.++..++..+.
T Consensus 453 GGsIg~aIy~~I~ 465 (599)
T PF06609_consen 453 GGSIGYAIYNAIF 465 (599)
T ss_pred hhHHHHHHHHHHH
Confidence 7777766665543
No 89
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=99.96 E-value=1.5e-29 Score=227.01 Aligned_cols=432 Identities=14% Similarity=0.084 Sum_probs=277.2
Q ss_pred hhcccccCCchhHHHHHHhhhcccCCCCCccccccc-----ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCc
Q 010692 29 KSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPK-----RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF 103 (503)
Q Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-----~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr 103 (503)
.++....+.+..+..+.+.++....+.+.+.+- .+ .+.=+.++.-.+.+..+..+|.++||++.|+++||+|||
T Consensus 36 qw~~fk~i~iAG~GfftDsYDlF~I~lVt~il~-~lY~~~~~~~g~~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK 114 (538)
T KOG0252|consen 36 QWKHFKAIIIAGMGFFTDSYDLFSISLVTKILG-YLYYHGDESGGHYPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRK 114 (538)
T ss_pred hHHHHHHHHHhhhhhcccchhhhhHHHHHHHHH-HHhcCCCCCCCcCCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcch
Confidence 344445555666677777776666666654441 11 111124556678999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHhhhhh-------HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHH
Q 010692 104 RLIGVGLSVWTFATAGCGSSF-------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA 176 (503)
Q Consensus 104 ~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 176 (503)
+++...+++..+++++++++. -.+++...|++.|+|.|+-+|.+.++.+|....+.||...+.+.+..+.|..
T Consensus 115 ~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~an~~~RGa~iaavFa~Qg~Gil 194 (538)
T KOG0252|consen 115 KVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESANKKTRGAFIAAVFAMQGFGIL 194 (538)
T ss_pred hhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhhhhccccceeEEEEEecchhHh
Confidence 999999999999999888762 2678899999999999999999999999999999999999999888888888
Q ss_pred HHHHHHHhhcC---------------cchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccC
Q 010692 177 LGYVYGGVVGS---------------HLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEAS 241 (503)
Q Consensus 177 ~g~~l~~~l~~---------------~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (503)
.|.+++-.+.. ..=||..+.+.+++++.....-+ .+||+.+.....++......++..++.+
T Consensus 195 aG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~ly~Rl-~M~Et~~Y~al~~~~~~~a~~d~~k~~~-- 271 (538)
T KOG0252|consen 195 AGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVLYFRL-KMPETARYTALVSKKLKQAAGDMKKVLS-- 271 (538)
T ss_pred hccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHHHhhh-cCCcchhHHHHhhcCHhhhhhccccccc--
Confidence 88877765531 12399999888776554443322 2266544321111000000000000000
Q ss_pred CCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch
Q 010692 242 NLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 321 (503)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (503)
.++.++... +...++..+..+.+.+.+... .-+++...+..+++.-.+++....+...++++..-.+.
T Consensus 272 -------~~~~~~~~~----~~~~~~~~~~~~~F~~~f~~~-hg~~Llgt~~~WFllDiafy~~nL~~s~I~~~ig~~~~ 339 (538)
T KOG0252|consen 272 -------VDIEAESTA----ESDVPPPSNSFGLFSRLFLRW-HGKHLLGTAGTWFLLDIAFYGQNLFQSVIFSAIGVIPS 339 (538)
T ss_pred -------cccchhhcc----ccCCCCcccccchHHHHHHHH-HHHHHHHHHHHHHhhhhhhhccccHHHHHHHhhccCCC
Confidence 011111100 000000001111111222221 33566667777888888888888887777764322221
Q ss_pred h---------hHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh----HHHHHHHHHH
Q 010692 322 A---------DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS----LYGFLALFTV 388 (503)
Q Consensus 322 ~---------~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 388 (503)
. +..-..+.....++|..+...++|++||+ ...+.+.++..++.+.+....+ ....+++..+
T Consensus 340 ~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk-----~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l 414 (538)
T KOG0252|consen 340 ANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRK-----YIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSL 414 (538)
T ss_pred cchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhH-----HHHHhhHHHHHHHHHHHcCCcccccccCceeehHHH
Confidence 1 11122344456677999999999999998 5555555555555544433322 2344555555
Q ss_pred HHHHHhhccc-hhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh-----hhhhHHHHHHHHHHHHHHHHH
Q 010692 389 GELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAG 462 (503)
Q Consensus 389 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~ 462 (503)
..++....-. ....+.++.+|.+.|+++.|+....... |++++...++++.+ ..| .+..+++.+.+..++.+
T Consensus 415 ~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~-GAivg~~~F~~~t~~~yp~~~g-~~~v~~i~~~~~~~gi~ 492 (538)
T KOG0252|consen 415 TFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKA-GAIVGAFGFLYLTDHNYPPNIG-VRNVFIILAGCMLLGIL 492 (538)
T ss_pred HHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccc-hHHHHHHHhhHhhhccCCcccc-chHHHHHHHHHHHHhHh
Confidence 5555554333 3334455667779999999999777777 99999999999988 555 67888888888887777
Q ss_pred HHHHHHHhccccccccccccccc
Q 010692 463 IWFVGIFLKSIDKFNEDGENQIS 485 (503)
Q Consensus 463 ~~~~~~~~~~~~~~~~~~~~~~~ 485 (503)
+.++.. ++|++..|+++++..
T Consensus 493 ~T~l~p--Etk~~~leei~~e~~ 513 (538)
T KOG0252|consen 493 FTLLIP--ETKGKSLEEISNEEE 513 (538)
T ss_pred eeEEee--cccccCHHHhcChhh
Confidence 666332 458888777755443
No 90
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=4.2e-28 Score=210.93 Aligned_cols=381 Identities=14% Similarity=0.124 Sum_probs=259.8
Q ss_pred ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 010692 59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 138 (503)
Q Consensus 59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (503)
.+.|...+.+|.+..|..++......+..+++..+|.++|++|||+.+.+..+..++..++.+.++|+..+++.|.+.|.
T Consensus 99 ~i~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~ 178 (528)
T KOG0253|consen 99 LILPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGF 178 (528)
T ss_pred HHHHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhc
Confidence 33355578899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccC
Q 010692 139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 218 (503)
Q Consensus 139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 218 (503)
|.|+ .|...++-.|..|..+|...+-.. ..+.+|.++...+.-.....+||||.....+.+..+.+.. .+..||+++
T Consensus 179 g~gg-~pv~~~~yle~lp~~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f-~~w~~ESpR 255 (528)
T KOG0253|consen 179 GVGG-LPVDSAIYLEFLPSSHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARF-LVWVYESPR 255 (528)
T ss_pred cCCC-ccHhHHHHHHhccCcCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHH-HhhcccCcc
Confidence 9998 888999999999999999877777 9999999999999999999999999999888665555554 444577766
Q ss_pred CCCcccccc-cccccccccCcccCCC------------CCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh--
Q 010692 219 GFAPAESGK-AQVVASVSEGSEASNL------------NDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL-- 283 (503)
Q Consensus 219 ~~~~~~~~~-~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 283 (503)
..-.+.++. ....-++..+.++.+- .++++.++.+......++ ...+..+++
T Consensus 256 f~~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke-------------~rg~~~nLlsp 322 (528)
T KOG0253|consen 256 FYLAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKE-------------VRGGTTNLLSP 322 (528)
T ss_pred hhhhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccc-------------cccchHhhcCh
Confidence 532222211 1111111111111110 011111111111111011 111222222
Q ss_pred --hhhhHHHHHHHHHHHHHHhhhhhc-----------------cccchhhhhc---ccchhhHHHHHhhhhhhhhchhhh
Q 010692 284 --QEKVYVVNVLGYIAYNFVIGAYSY-----------------WGPKAGYNIY---HMSNADMMFGGVTIVCGIVGTISG 341 (503)
Q Consensus 284 --~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 341 (503)
++..+.... .++...+.+++... ..|.+++... ..+.....=..+..+...+|.++.
T Consensus 323 ~lrkttlllw~-iwfgnafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt 401 (528)
T KOG0253|consen 323 KLRKTTLLLWR-IWFGNAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLIT 401 (528)
T ss_pred HHHHHHHHHHH-HHHhhHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHH
Confidence 222222111 12222233333222 2233332211 011112211234567889999999
Q ss_pred hhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHH
Q 010692 342 GFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 421 (503)
Q Consensus 342 g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 421 (503)
++++||+||| +.+....++..++.++.....+.....+..+..-++..+.+...+.+..|.+|...|+++.|.+.
T Consensus 402 ~~iverlGRK-----kTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyPTavRatgvGtcS 476 (528)
T KOG0253|consen 402 GVIVERLGRK-----KTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAVRATGVGTCS 476 (528)
T ss_pred HHHHHHhcch-----hHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccchhhhhcchhhhh
Confidence 9999999999 78888888777777777766666666677777778888889999999999999999999999998
Q ss_pred HHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 422 VSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 422 ~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
.+..+ |+++.|.+. ...+..- + .+..+.+.+++++.+..+
T Consensus 477 smaRI-ggI~~p~iA-~~~e~s~-s-l~i~vy~~~~ilagIavc 516 (528)
T KOG0253|consen 477 SMARI-GGIFSPVIA-MRAELST-S-LPIFVYGALFILAGIAVC 516 (528)
T ss_pred hHHhh-hhhhhhHHH-HHhccce-e-ehHHHHHHHHHHHHHHhe
Confidence 88888 999999777 4444322 2 455556666666666655
No 91
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=2.3e-27 Score=230.50 Aligned_cols=392 Identities=13% Similarity=0.038 Sum_probs=236.5
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWS-IAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~g~~~ 142 (503)
.+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++.+.++++++... ++++|+++|+|.|.
T Consensus 42 ~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~ 121 (489)
T PRK10207 42 VKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGL 121 (489)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhcccc
Confidence 78899999999999999999999999999999999 99999999999999999999999877554 55899999999999
Q ss_pred hhhchhhhhhccCCCC--CchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCC
Q 010692 143 FISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGF 220 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~ 220 (503)
..|...+++.|.+|++ +|++++++++.+.++|..+||.+++++.+++|||+.|++.++ +++..++.+...++..++.
T Consensus 122 ~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i-~~~~~~~~~~~~~~~~~~~ 200 (489)
T PRK10207 122 FKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGA-GLIIALLVYFACRGMVKDI 200 (489)
T ss_pred ccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHH-HHHHHHHHHHHcchhhccc
Confidence 9999999999999877 457799999999999999999999999999999999999755 4444444444444332221
Q ss_pred CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhh------h-hhhchHHHHHHHhhhhhHHHHHH
Q 010692 221 APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFL------N-QLSQFSQDTKVLLQEKVYVVNVL 293 (503)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~ 293 (503)
.++.+++..+.. ....-... -..-.................... . -.... ....+.+|+|.+....+
T Consensus 201 ~~~~~~~~~d~~---~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~-~~~~~~~r~r~~~~~~l 274 (489)
T PRK10207 201 GSEPDHKPMSFS---KLLLVLLG--SVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREA-FKLDKTGRNKMFVAFVL 274 (489)
T ss_pred CCCCCccchhhh---hHHHHHHH--HHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH-hcCCHHHHHHHHHHHHH
Confidence 101000000000 00000000 000000000000000000000000 0 00000 00013455555544332
Q ss_pred H--HHHHHHHhhhhhccccchhhhhc-----ccchhhHHHHHhhhhhhhhchhhhhhhhhcccccch---hhHHHHHHHH
Q 010692 294 G--YIAYNFVIGAYSYWGPKAGYNIY-----HMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS---NAFKLLSAAT 363 (503)
Q Consensus 294 ~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~---~~~~~~~~~~ 363 (503)
. ...+...+....+.++.+.++.. |.......+..+..+..++..++.+++.||+++|.. ...+.. .+.
T Consensus 275 ~~~~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~-~G~ 353 (489)
T PRK10207 275 MLEAVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFT-LGM 353 (489)
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHH-HHH
Confidence 2 22333334444455666665322 222112223333444555667778899999988741 111122 222
Q ss_pred HHHHHHHHHH-----HHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692 364 FLGAISCLTA-----FCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 364 ~~~~~~~~~~-----~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
++.....+.. ... .+.+..+...++.+.+.....++....+.+..|++.+|.++|+.+...++ |+.++.
T Consensus 354 ~l~~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~i-g~~lg~ 432 (489)
T PRK10207 354 FLCSLGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGLAMIAALVPQHLMGFILGMWFLTQAA-AFLLGG 432 (489)
T ss_pred HHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 2222222111 111 23455666777888888889999999999999999999999999877777 777666
Q ss_pred hhHHHHHh---------hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 434 PLVGVLQD---------HVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 434 ~~~g~l~~---------~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
.+...... ..+.+...|...++..++..++.+
T Consensus 433 ~l~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~ 473 (489)
T PRK10207 433 YVATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMA 473 (489)
T ss_pred HHHHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 55544311 012244555555555444444443
No 92
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=99.96 E-value=2.7e-27 Score=234.98 Aligned_cols=392 Identities=14% Similarity=0.113 Sum_probs=250.0
Q ss_pred CCCCcchhhhhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh
Q 010692 20 QPNLPIQQSKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS 99 (503)
Q Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr 99 (503)
++.++.+|+..+++......+........ .........+ .+.+..+.....+..+++.+|..+|++++|+++||
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~s~~~~--~~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~ 144 (521)
T KOG0255|consen 71 DPANPLNWPSWKKWLLVIVICLDGWVYDY----GSSVYSIVSE--WNLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDR 144 (521)
T ss_pred CcCCccccccccccccccccccceeEecC----CCCcccccch--hceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhh
Confidence 66677777777776544443333333222 1111111101 35667788888999999999999999999999999
Q ss_pred cCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHH
Q 010692 100 HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 179 (503)
Q Consensus 100 ~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 179 (503)
+|||+++++++++..++.++.++++|++.+++.|++.|++.+........++.|++++++|+.+..+ ......+..+++
T Consensus 145 ~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~ 223 (521)
T KOG0255|consen 145 FGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLVAEIVSPKQRGLALTL-GGFFFVGGLMLP 223 (521)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhheeecCcchhhHHHHH-HHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999999999 777778888888
Q ss_pred HHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCccccccccccc-ccccCcccCCCCCccccccchhhhhh
Q 010692 180 VYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVA-SVSEGSEASNLNDHVSEDISDQASER 258 (503)
Q Consensus 180 ~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (503)
+.++++.. +||+.+++..+++++..+. +++.||++++.....+.+...+. +...+.+... .+..+.........
T Consensus 224 ~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g~~~~a~~~l~~~a~~n~~~--~~~~~~~~~~~~~~ 298 (521)
T KOG0255|consen 224 AGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKGRIDEAIKILKKIAKLNGRK--LSVKELLRLELLLR 298 (521)
T ss_pred HHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcCchHHHHHHHHHHHhhcCCC--CCcHHHHHHHHHhh
Confidence 88888887 8999999999998877766 55556776654333222111110 0001111000 00000010000000
Q ss_pred hhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhch
Q 010692 259 SIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGT 338 (503)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 338 (503)
+.+. ........+.++++.|++....+...+..... ...++.-.+.....+.+. .....+.+.....+.
T Consensus 299 ~~~~--------~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~-~~~y~gl~~~~~~lg~~~--~~~~~~~~~~~~p~~ 367 (521)
T KOG0255|consen 299 PLKL--------LFTEPKISFLDLFRTPRLRYRTLYLLFIWFVF-SLVYYGLSLNVSGLGGNI--YLNFTLSGLVELPAY 367 (521)
T ss_pred Hhhh--------hccCCCCchhhhhcCHHHHHHHHHHHHHHHHH-hHHHHhhhhhhhhcCchH--HHHHHHHHHHHhhHH
Confidence 0000 00000022556666665444333322222221 222222222222233332 222233334667777
Q ss_pred hhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh-HH--HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692 339 ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS-LY--GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 415 (503)
Q Consensus 339 ~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (503)
...+...|++||| .....+..+..+.++....... .. .......+..++.+.++...+....+.+|+..|+.
T Consensus 368 ~~~~~~~~~~gR~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r~~ 442 (521)
T KOG0255|consen 368 FRNGLLLPEFGRR-----PPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVRNT 442 (521)
T ss_pred HHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHH
Confidence 7778999999888 5666655555555544444332 22 34555555666666777777888899999999999
Q ss_pred HHHHHHHHHhhcccccchhhHHHHH
Q 010692 416 SMAISTVSIHIFGDVPSSPLVGVLQ 440 (503)
Q Consensus 416 ~~g~~~~~~~~~g~~~~~~~~g~l~ 440 (503)
+.+.......+ |.+++|.+.-...
T Consensus 443 ~~~~~~~~~~~-~~i~ap~~~~~~~ 466 (521)
T KOG0255|consen 443 AVGAISAAARL-GSILAPLFPLLLR 466 (521)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHh
Confidence 99999877777 8888886654433
No 93
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.96 E-value=2.2e-27 Score=208.03 Aligned_cols=357 Identities=13% Similarity=0.039 Sum_probs=221.8
Q ss_pred CCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhh
Q 010692 70 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAP 149 (503)
Q Consensus 70 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~ 149 (503)
.+..-.|.+.+.|+++..+.++.+|.++||+|||++++++++..++..++.++++||..+.+.|++.|+..| ......+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kg-nl~v~rA 143 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKG-NLSVIRA 143 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccC-chHHHHH
Confidence 345567999999999999999999999999999999999999999999999999999777778999999998 5567889
Q ss_pred hhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC---cchhHHHHHH----HHHHHHHHHHHHHhccccccCCCCc
Q 010692 150 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---HLNWRYAFWG----EAILMLPFAVLAFVIKPLQLKGFAP 222 (503)
Q Consensus 150 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---~~gwr~~f~~----~~~~~~~~~~~~~~~~p~~~~~~~~ 222 (503)
+++|.+++|+|+++++.++.++++|.++||.+|+++.. ..| +++|.. ..++.........++.||+.+.+++
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g-~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISG-SYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHhhHhhhc-cCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 99999999999999999999999999999999999987 222 122222 2222222122334455887655333
Q ss_pred ccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHh
Q 010692 223 AESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVI 302 (503)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (503)
.+++... .+....+ .+..+.+ ...+. ...++....-.......+.+-.+.+...+
T Consensus 223 ~~~~~~~---------~~~~~~~--~~~~~~~-~~~~v-------------~~lrn~p~~~~i~~~~i~~l~~~ly~~l~ 277 (451)
T KOG2615|consen 223 NDEHSTL---------QEAADDR--LALLKFA-RIFKV-------------AALRNPPLLDFISVLRIFGLHYFLYLELF 277 (451)
T ss_pred cccccch---------hhhhhhh--hhhcchh-hhhhh-------------hhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 2111100 0000000 0000000 00000 00000000000011222333345555555
Q ss_pred hhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692 303 GAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 382 (503)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (503)
....++.+.+-.+.+++++.+.. -+....++.+.++.+.+..+..+........+.....++.-..++..........
T Consensus 278 s~~~~t~~~l~~~rfg~ss~~~G--~vl~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l 355 (451)
T KOG2615|consen 278 SGLENTVLFLTHGRFGYSSMQQG--KVLSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVL 355 (451)
T ss_pred HHHHhhHHHhhcCccCCChhhhe--eeeehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhh
Confidence 55566666565666777764431 1222334444555555555555443211133333333333333333333444445
Q ss_pred HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
.....+..+......+.++.++....|+++||+++|+......+ +-++||.+.|.+..+...-+.++...+.+
T Consensus 356 ~~~s~l~sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~al-aRaiGPlv~g~i~~Ws~~~~~a~~~~~~L 428 (451)
T KOG2615|consen 356 YLGSTLKSFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGAL-ARAIGPLVSGVIFSWSQGAQPAYIAWGAL 428 (451)
T ss_pred hHHHHHHHHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHH-HHHhhhhhhheeEEEecCCCceeeehHHH
Confidence 55556666666677778888888999999999999999888887 88999999988877654333444444333
No 94
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.95 E-value=1.1e-32 Score=269.43 Aligned_cols=383 Identities=19% Similarity=0.234 Sum_probs=249.8
Q ss_pred cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh---HHHHHHHHHHHHHhhhhhhhhchhh
Q 010692 73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFWSIAICRMLVGVGEASFISLAAP 149 (503)
Q Consensus 73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~g~~~~~~~~~~ 149 (503)
.+.+++.+...+|..+|++++|+++||+|||+.++++.++..+++++.++++ |++.+.++|+++|++.|...+....
T Consensus 46 ~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~~ 125 (451)
T PF00083_consen 46 LLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSPI 125 (451)
T ss_pred HHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4578999999999999999999999999999999999999999999999999 9999999999999999999999999
Q ss_pred hhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc---hhHHHHHHHHHHHHHHHHHHHhccccccCCCCccccc
Q 010692 150 FIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESG 226 (503)
Q Consensus 150 ~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 226 (503)
++.|..|+++|++..++.+.+..+|..++..++..+.... +||..+++.++++++..+.. ++.||++++...+++.
T Consensus 126 ~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~-~~~pESP~wL~~~~~~ 204 (451)
T PF00083_consen 126 YISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLR-FFLPESPRWLLSKGRD 204 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-cccccccceecccccc
Confidence 9999999999999999999999999999988876654433 49999999998887655544 5568888765443333
Q ss_pred ccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhh-----HHHHHHHHHHHHHH
Q 010692 227 KAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-----YVVNVLGYIAYNFV 301 (503)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 301 (503)
++.. +..++.++.+..++..++..++.++.++++ ..++++++++. +....+..+.....
T Consensus 205 ~~A~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g 268 (451)
T PF00083_consen 205 EEAE--KVLRKLRGKEIEDEEIEEIKAEKKESQESK--------------ASWRDLFRNKKYRKRLLIALLLQFFQQFSG 268 (451)
T ss_pred cccc--cccccccccccccccccccccccccccccc--------------eeeeeccccccccccccccccccccccccc
Confidence 2111 111111111111111111111111111000 12233333322 22222222222333
Q ss_pred hhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH----H-h
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF----C-L 376 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~ 376 (503)
.+...++.|.++.+ .+.+.. .....+..+...++.+++.++.||+||| ++++.+.....+..+... . .
T Consensus 269 ~~~~~~~~~~i~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~GRr-----~~~i~~~~~~~~~~~~~~~~~~~~~ 341 (451)
T PF00083_consen 269 INFIFYYSPSIFEN-AGISNS-FLATLILGLVNFLGTLLAIFLIDRFGRR-----KLLIIGLLLMAICSLILGIIFFLGV 341 (451)
T ss_pred cccccccccccccc-cccccc-cccccccccccccccccccccccccccc-----ccccccccccccccccccccccccc
Confidence 44556666766655 344433 3333455567778888888999999999 555555554444333331 1 1
Q ss_pred hh----HHHHHHHHHHHHHHHhhccchhh-HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHH
Q 010692 377 SS----LYGFLALFTVGELLVFATQAPVN-YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTL 451 (503)
Q Consensus 377 ~~----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~ 451 (503)
+. ....+....+.....+.+..+.. .+..|.+|++.|+++.|+.....++ +++++|.+...+.+..+.+ ..+.
T Consensus 342 ~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i-~~~i~~~~~~~~~~~~~~~-~~~~ 419 (451)
T PF00083_consen 342 SSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPTKVRSTGIGLSYAVGRI-GGFIIPFLFPYLFNNLGGW-GVFL 419 (451)
T ss_pred ccccccccccceeeeeccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccc-ccch
Confidence 12 12222333333333343444444 5668888889999999999888887 7788888888888776522 3445
Q ss_pred HHHHHHHHHHHHHHHHHHhc-cccccccccccc
Q 010692 452 ALTSIFFLAAGIWFVGIFLK-SIDKFNEDGENQ 483 (503)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 483 (503)
+.+++.++..++. ..++| +|+++.||+++.
T Consensus 420 i~~~~~~i~~i~~--~~~lpET~g~~l~ei~~~ 450 (451)
T PF00083_consen 420 IFAGVCLIAIIFV--YFFLPETKGKTLEEIQEM 450 (451)
T ss_pred hhHHHHHHHHhhe--eEEEeeCCCCCHHHHHhh
Confidence 5444443333322 22456 488888877653
No 95
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.95 E-value=3.4e-26 Score=222.44 Aligned_cols=390 Identities=12% Similarity=0.037 Sum_probs=235.0
Q ss_pred ccc--cCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 65 RGD--FKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 65 ~~~--~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
.++ +|++..+.+++.+.+.++..++++++|+++|| +|||+++.++.++.+++.++.+++++++.++++|++.|+|.|
T Consensus 38 ~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g 117 (475)
T TIGR00924 38 VQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSG 117 (475)
T ss_pred HhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHHHhccc
Confidence 444 89999999999999999999999999999999 899999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCC---chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccC
Q 010692 142 SFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLK 218 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~ 218 (503)
...+...++++|++|+++ |++++++++.+.++|.++||++++++.+++|||+.|++.++..++.. +.++..++..+
T Consensus 118 ~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~-l~~~~~~~~~~ 196 (475)
T TIGR00924 118 LFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGL-LTFFAGRHMLR 196 (475)
T ss_pred cccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHH-HHHHHcccccc
Confidence 999999999999998764 88899999999999999999999999998899999999886554443 33333333221
Q ss_pred CCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhh------------hhhhhchHHHHHHHhhhh
Q 010692 219 GFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRF------------LNQLSQFSQDTKVLLQEK 286 (503)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~ 286 (503)
+.++ +++....++.+..................... ..+....... .+...+...+..+-.|..
T Consensus 197 ~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (475)
T TIGR00924 197 DIGS--VPDPLSGQGKTYGKLLLALLAALALVFFCAWL--MHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKMY 272 (475)
T ss_pred cCCC--CCCCcchhhhhhHHHHHHHHHHHHHHHHHHHH--HhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHHH
Confidence 1111 01000000000000000000000000000000 0000000000 000000000000111222
Q ss_pred hHHHHHHHHHHHHHHhhhhhccccchhhhhcccch-----hhHHHHHhhhhhhhhchhhhhhhhhccccc---chhhHHH
Q 010692 287 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN-----ADMMFGGVTIVCGIVGTISGGFILDQMGAT---ISNAFKL 358 (503)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~~~ 358 (503)
.+..+.+...++...+....+.++.+.++..+.+. ....+.++..+.-++..++..++..|+.|| .....++
T Consensus 273 ~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k~ 352 (475)
T TIGR00924 273 AYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLKF 352 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHH
Confidence 33333443444445555555555665554322221 122333444444444444444433344433 1111122
Q ss_pred HHHHHHHHHHHHHHHHH---------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccc
Q 010692 359 LSAATFLGAISCLTAFC---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGD 429 (503)
Q Consensus 359 ~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~ 429 (503)
..+.++..+.+..... ..+.+..+...++.+.+.....|....++.+..|++.||+.+|+......+ |.
T Consensus 353 -~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~-g~ 430 (475)
T TIGR00924 353 -TLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAM-GS 430 (475)
T ss_pred -HHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HH
Confidence 3333333333322221 246677778888888888899999999999999999999999999877766 87
Q ss_pred ccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 010692 430 VPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 462 (503)
Q Consensus 430 ~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 462 (503)
.+++.+.....+..+ +...|...+...++..+
T Consensus 431 ~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 462 (475)
T TIGR00924 431 LLGGYLATFGAVPQG-VTGVFGKIGLVTLLVGV 462 (475)
T ss_pred HHHHHHHHHHhcccc-hhhHHHHHHHHHHHHHH
Confidence 877777776655433 44445555444443333
No 96
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=2.3e-26 Score=222.78 Aligned_cols=401 Identities=11% Similarity=-0.018 Sum_probs=260.9
Q ss_pred ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh------hHHHHHHHH
Q 010692 59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS------FDFWSIAIC 132 (503)
Q Consensus 59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l~~~ 132 (503)
.+.+++++++|+|.++++++.++. ..+..++++.|++.||+|+|+++.++.++++++.++++++ ++++.+++.
T Consensus 48 v~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~ 126 (591)
T PTZ00207 48 LISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVY 126 (591)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHH
Confidence 334677999999999999998874 4456788889999999999999999999999999999998 689999999
Q ss_pred HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHH-HHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692 133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL-GYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~-g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
|++.|+|.+...+.....+.+|+| ++||++.|+...+.++|.++ +++..+++. .+|+..|++.+++.++..++.+.
T Consensus 127 r~l~G~G~~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~--~~~~~~fl~l~vl~~vv~ll~~~ 203 (591)
T PTZ00207 127 NGLMTLGCMLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS--DNTSAYFFFLMSFALVVGILAIV 203 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH--HhHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999998989999999997 56999999999999999975 555555554 36999999999998888887777
Q ss_pred ccccccCCC---Cc---cccccccc---------cccc--c---------------------------------------
Q 010692 212 IKPLQLKGF---AP---AESGKAQV---------VASV--S--------------------------------------- 235 (503)
Q Consensus 212 ~~p~~~~~~---~~---~~~~~~~~---------~~~~--~--------------------------------------- 235 (503)
+.++.+... ++ +++++... ++.. .
T Consensus 204 ~vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~ 283 (591)
T PTZ00207 204 FMRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTV 283 (591)
T ss_pred heeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHH
Confidence 763322111 00 11111000 0000 0
Q ss_pred --------------cCcccCCCC---Cc-cccccchhhhhhhhcccc-hhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 236 --------------EGSEASNLN---DH-VSEDISDQASERSIKSIG-ESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 236 --------------~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
...+....+ +. ..+..+...+....+... .............++.+.+++..+|.+...++
T Consensus 284 ~~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~ 363 (591)
T PTZ00207 284 IVLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIF 363 (591)
T ss_pred HHHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHH
Confidence 000000000 00 000000000000000000 00000000111126778888999999999888
Q ss_pred HHHHHhhhhhccccchhhhhcccc-hh--hHHHHHhhhhhhhhchhhhhhhhhcccccc----hhhHHHHHHHHHHHHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYHMS-NA--DMMFGGVTIVCGIVGTISGGFILDQMGATI----SNAFKLLSAATFLGAIS 369 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~----~~~~~~~~~~~~~~~~~ 369 (503)
+.......+...+.++.+...|.+ .. ...+.++.++++.+|++..|.+.....+|. ..+...+....++.++.
T Consensus 364 cg~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~~~~~~ 443 (591)
T PTZ00207 364 CCVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSVCIITM 443 (591)
T ss_pred HhhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHHHHHHH
Confidence 888887777888888887764542 22 222567889999999999999873333322 11112233333322222
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccc-hhhHHHHHhhhh----
Q 010692 370 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPS-SPLVGVLQDHVN---- 444 (503)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~-~~~~g~l~~~~g---- 444 (503)
++++...+ ...+.+..++.+++.|..++.....+.+.+. ++-|+-+-+.....-+ |..+- -.+.|.++|.-.
T Consensus 444 lll~~~~p-~~~L~~~~~lvg~~~G~~~~~~~~i~selFg-k~~g~~yN~~~~a~pi-gs~~~n~~l~G~~Yd~ea~k~~ 520 (591)
T PTZ00207 444 LTLFLTLP-KAALPLPYFIAAFANGFMAATIALVTRTIFA-KDPAKHYNFCFLGSVL-SAIFLNRLLYGEWYTQQADKLG 520 (591)
T ss_pred HHHHHHCC-ccHhHHHHHHHHHHhhHhHHHHHHHHHHHhc-cchHHHhhHHhHHHHH-HHHHHHHHHHHHHHHHHHhhCC
Confidence 33322222 2466777888889999999988888889888 8888887777554444 55443 457788887532
Q ss_pred h--------HHHHHHHHHHHHHHHHHHHHH
Q 010692 445 N--------WRKTTLALTSIFFLAAGIWFV 466 (503)
Q Consensus 445 ~--------~~~~~~~~~~~~~~~~~~~~~ 466 (503)
. ++.+|++++++.+.+.+....
T Consensus 521 ~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~ 550 (591)
T PTZ00207 521 QDVCTERVCVVMPLAFLLGLSFLAFITSTY 550 (591)
T ss_pred CCeeCCceeeHhHHHHHHHHHHHHHHHHhh
Confidence 1 467788888777777766543
No 97
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.94 E-value=6e-25 Score=210.35 Aligned_cols=359 Identities=11% Similarity=-0.051 Sum_probs=238.6
Q ss_pred HHHHHhhhcccCCCCCcccccccccccCCCccchhhH--HHHHHHHHHHHHhHHHH-hhhhcCCchhHHHHHHHH-HHHH
Q 010692 42 EAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVL--SSAFMVGLLVASPIFAS-LAKSHNPFRLIGVGLSVW-TFAT 117 (503)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~--~s~~~~~~~~~~~~~g~-l~dr~Grr~~l~~~~~~~-~~~~ 117 (503)
..+..+...+...+.. |.+.+|.|.+.+++|++ .+.+.+...+.+++++. ..||+||||..++.+.+. ++..
T Consensus 9 ly~~~g~~~~~~~p~l----p~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~ 84 (390)
T TIGR02718 9 LYLSQGIPIGLAMDAL----PTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACL 84 (390)
T ss_pred HHHHHHhHHHHHHHHH----HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHH
Confidence 3444444333444444 44468899999999997 46778888888888854 799999999865555332 2112
Q ss_pred HHhh---hhhH-HHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHH
Q 010692 118 AGCG---SSFD-FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY 193 (503)
Q Consensus 118 ~~~~---~~~~-~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~ 193 (503)
...+ ...+ ...++..-++.++..+...+...++..|..++++++...+....+..+|.++|+.+.+++.+.+|||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~d~~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~ 164 (390)
T TIGR02718 85 ASLALVGPDVAGAGWAVGLLACASLASATQDIATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRP 164 (390)
T ss_pred HHHHcCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHH
Confidence 2222 2222 33444455556667777778888888899888888988899999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692 194 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS 273 (503)
Q Consensus 194 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (503)
.|++.+++.++..+..++..|+.+++ +++++.
T Consensus 165 ~f~~~a~l~~~~~~~~~~~~~~~~~~---~~~~~~--------------------------------------------- 196 (390)
T TIGR02718 165 AFLLVACVPLASLVCVLWLKDRAVAS---PEAPLA--------------------------------------------- 196 (390)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcCc---cccchh---------------------------------------------
Confidence 99999988877666655554331100 000000
Q ss_pred chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHH-HHhhh-hhhhhchhhhhhhhhccccc
Q 010692 274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMF-GGVTI-VCGIVGTISGGFILDQMGAT 351 (503)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~g~l~d~~~~~ 351 (503)
...++++++|+|.++......++..........+.+.|+.+ .|.++..... ..... ...+++.++.|++.||+++|
T Consensus 197 -~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~ 274 (390)
T TIGR02718 197 -RRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLW 274 (390)
T ss_pred -hHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 01345677888888877776777766667777788888887 5777655433 23333 45667788999999999987
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHh------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC-CCchhHHHHHHHHH
Q 010692 352 ISNAFKLLSAATFLGAISCLTAFCL------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSI 424 (503)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~ 424 (503)
+.+..+..+.....+..... .+.........+.++..+...+.......+..++ +.+++.+++.+...
T Consensus 275 -----~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 349 (390)
T TIGR02718 275 -----RTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTR 349 (390)
T ss_pred -----HHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHH
Confidence 55544443332222211111 1112222222333344555666666676777776 88999999999888
Q ss_pred hhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHH
Q 010692 425 HIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAA 461 (503)
Q Consensus 425 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 461 (503)
+. |..++|.+.|++.|..| +...|...+++.+++.
T Consensus 350 ~l-g~~~g~~~~G~l~~~~G-~~~~f~~~~~~~l~a~ 384 (390)
T TIGR02718 350 DL-GELIASSIAGYLTDRFG-YAGGFLSGTVLAVLAI 384 (390)
T ss_pred HH-HHHHHHHHHHHHHHHHc-cHHHHHHHHHHHHHHH
Confidence 88 99999999999999887 7677776665554443
No 98
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.94 E-value=1.1e-24 Score=213.21 Aligned_cols=143 Identities=18% Similarity=0.147 Sum_probs=124.8
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~~~ 142 (503)
.+++|++.++.+++.+.+........+++|+++|| +|||++++++.++.+++..++++++ +.+.++++|+++|+|.|.
T Consensus 49 ~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~ 128 (500)
T PRK09584 49 VKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGL 128 (500)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhc
Confidence 68899999999999888887777777899999999 5999999999999999999998874 566777899999999999
Q ss_pred hhhchhhhhhccCCCCC--chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Q 010692 143 FISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 207 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 207 (503)
..+...+++.|++|+++ |..++++++.+.++|..+||.+++++.+++|||+.|++.++..++..+
T Consensus 129 ~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i 195 (500)
T PRK09584 129 FKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVV 195 (500)
T ss_pred ccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 99999999999998654 456889999999999999999999999999999999998765444443
No 99
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.93 E-value=1.6e-23 Score=202.41 Aligned_cols=376 Identities=20% Similarity=0.313 Sum_probs=284.2
Q ss_pred hHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692 40 LAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 119 (503)
Q Consensus 40 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 119 (503)
++..+...+ .. ......+..+++.|+++.++.|++.+.+-++..+...+..+..-|.-|-+.+-+|.+++++++++
T Consensus 103 ~~~~~~q~l---~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll 178 (735)
T KOG3626|consen 103 SLAAFAQGL---YV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLL 178 (735)
T ss_pred HHHHHHHHh---hh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHH
Confidence 444444444 33 44555558889999999999999999999999999999999999999999999999999999999
Q ss_pred hhhh--------------------h-------------------------------HHH-HHHHHHHHHHhhhhhhhhch
Q 010692 120 CGSS--------------------F-------------------------------DFW-SIAICRMLVGVGEASFISLA 147 (503)
Q Consensus 120 ~~~~--------------------~-------------------------------~~~-~l~~~r~l~G~g~~~~~~~~ 147 (503)
+++- + .++ .++++.++.|+|....++.+
T Consensus 179 ~alPHf~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlG 258 (735)
T KOG3626|consen 179 FALPHFFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLG 258 (735)
T ss_pred HhChHHhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCC
Confidence 8761 0 033 56679999999999999999
Q ss_pred hhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc------------------c-hhHHHHHHHHHHHHHHHHH
Q 010692 148 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------------L-NWRYAFWGEAILMLPFAVL 208 (503)
Q Consensus 148 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~------------------~-gwr~~f~~~~~~~~~~~~~ 208 (503)
.+|+-|...+++-...+|+......+|.++|.++|+++.+. . -|+.-|++.+.+.++..+.
T Consensus 259 isYiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p 338 (735)
T KOG3626|consen 259 ISYIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVP 338 (735)
T ss_pred CccccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999987632 1 3888888999888888877
Q ss_pred HHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhH
Q 010692 209 AFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVY 288 (503)
Q Consensus 209 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (503)
.++++.+.++...+.+.++.. ..+++.. ..+......+..+++.+..+++++||.+
T Consensus 339 ~f~fPk~lp~~~~~~~~~~~~--------------------~~k~~~~----~~~~~~~~~~~ikdfp~s~~~ll~N~if 394 (735)
T KOG3626|consen 339 LFFFPKELPKSQKRKRARDLH--------------------VLKTESG----GAKSDKTFGKKIKDFPKSIKRLLSNPIF 394 (735)
T ss_pred HHhCcccCccccccchhhhhc--------------------ccccccc----cccCCcchhhhHHHHHHHHHHHhcCchH
Confidence 776643322211110000000 0000000 0111111224557778889999999999
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH--HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHH
Q 010692 289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 366 (503)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (503)
...+++..+....+.++.+|+|.|++++++.++..+ ..+.+...+..+|.+++|++.+|+.-+.+...++.++..++.
T Consensus 395 ~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~l~ 474 (735)
T KOG3626|consen 395 MLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSIGVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSVLS 474 (735)
T ss_pred HHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhhhhhhhhhhhhccceeeeeecccHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999997554 333455566788999999999999877555445555555555
Q ss_pred HHHHHHHHH-----------------------------------------------------------------------
Q 010692 367 AISCLTAFC----------------------------------------------------------------------- 375 (503)
Q Consensus 367 ~~~~~~~~~----------------------------------------------------------------------- 375 (503)
.++....++
T Consensus 475 l~~~~~~~~igC~~~~~aG~~~~y~~~~~~~~~~~~~s~Cn~~C~C~~~~~~PVCg~~G~tY~SpChAGC~~~~~~~~~~ 554 (735)
T KOG3626|consen 475 LLFYSLLFFIGCESSPVAGVTNSYEGSPAFTSHENPFSSCNSDCSCDTSEYEPVCGENGITYFSPCHAGCTESSGTSDGN 554 (735)
T ss_pred HHHHHHHHEecCCCCcccceecCCCCCCccccCCCchhhhhcCCCCCCcCcCcccCCCCCEEeChhhhCCcccccCCCCc
Confidence 555333322
Q ss_pred --------hh--------------------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhc
Q 010692 376 --------LS--------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIF 427 (503)
Q Consensus 376 --------~~--------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 427 (503)
.. ....+++.+++..+..+....+.+.++.+.+++++|..++|+..+..+++
T Consensus 555 ~~ytnCsCv~~~~~~~~~a~~G~C~~~c~~~~~~Fl~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irll 634 (735)
T KOG3626|consen 555 TIYTNCSCVPTNKNGNGSAKKGYCPNDCCRQFLIFLALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLL 634 (735)
T ss_pred eeeccccccccccCCCceeecCCCCCCcchhhHHHHHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHH
Confidence 00 12334555555556666777888889999999999999999999999999
Q ss_pred ccccchhhHHHHHhhh
Q 010692 428 GDVPSSPLVGVLQDHV 443 (503)
Q Consensus 428 g~~~~~~~~g~l~~~~ 443 (503)
|.+.+|+++|+++|..
T Consensus 635 g~IPsPIifG~~ID~t 650 (735)
T KOG3626|consen 635 GFIPSPIIFGAVIDTT 650 (735)
T ss_pred hcCCchHhhhhhHhhH
Confidence 9999999999999965
No 100
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.92 E-value=4e-22 Score=191.06 Aligned_cols=350 Identities=15% Similarity=0.130 Sum_probs=266.1
Q ss_pred cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhH-HHHHHHHHHHHHHhhhh-h-HHHHHHHHHHHHHhhhhhhhhchhh
Q 010692 73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI-GVGLSVWTFATAGCGSS-F-DFWSIAICRMLVGVGEASFISLAAP 149 (503)
Q Consensus 73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~-~-~~~~l~~~r~l~G~g~~~~~~~~~~ 149 (503)
+..++..++..+..++..|+.|.++|+-|+||.+ .+...+..+++.+..+. + +++...+.-++.-++.+...+...+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457888999999999999999999999877654 44555555666666664 3 4444445555556777888888999
Q ss_pred hhhccCCCCCc--------------------------hhHHHHHHhHHhHHHHHHHHHHHhhcC--------cchhHHHH
Q 010692 150 FIDDNAPVPQK--------------------------TAWLSMFYMCIPTGVALGYVYGGVVGS--------HLNWRYAF 195 (503)
Q Consensus 150 ~i~~~~~~~~r--------------------------~~~~~~~~~~~~~G~~~g~~l~~~l~~--------~~gwr~~f 195 (503)
++.|..+++++ ++..+.-.....+|.++..++.-.+.. ..+-|..+
T Consensus 150 ~LP~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~~ 229 (477)
T PF11700_consen 150 YLPDLARPEPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVAF 229 (477)
T ss_pred HhHhhcCCChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHHH
Confidence 99999999888 899998888888888887776654421 23468889
Q ss_pred HHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhch
Q 010692 196 WGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQF 275 (503)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (503)
.+.++--++..+..++..|+.++....++..+ .....+++.
T Consensus 230 ~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~---------------------------------------~~~~g~~~l 270 (477)
T PF11700_consen 230 LIVALWWLVFSIPLFLWLPDRPGPRPLPSGSS---------------------------------------YLRFGFKRL 270 (477)
T ss_pred HHHHHHHHHHHHHHHHhCCCCCCCCCCCcchh---------------------------------------HHHHHHHHH
Confidence 99998888888888888776443211111110 011344555
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchh
Q 010692 276 SQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISN 354 (503)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 354 (503)
.+.++++.|.|.....+++++++.-+...+......|..+..+++..+. .+..+..+.+++|.++.+++.||+|.|..
T Consensus 271 ~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~- 349 (477)
T PF11700_consen 271 WRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYATEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTK- 349 (477)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchh-
Confidence 5777888888999999999999999999999999999999999997766 45567789999999999999999998843
Q ss_pred hHHHHHHHHHHHHHHHHHHHH--------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 355 AFKLLSAATFLGAISCLTAFC--------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 355 ~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
+.+....+...+..+.... ..+.+.+.+..++.|.+.+..++..-++..+..|+++.+...|++......
T Consensus 350 --~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ 427 (477)
T PF11700_consen 350 --RTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKA 427 (477)
T ss_pred --HHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHH
Confidence 2333333333222222222 456677777888888999999999999999999999999999999988888
Q ss_pred cccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 427 FGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 427 ~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
.+++||.+.|.+.+.+|+.+.++....++++++.++..
T Consensus 428 -ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 428 -SSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred -HHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 88899999999999999888998888888777776665
No 101
>PRK09669 putative symporter YagG; Provisional
Probab=99.92 E-value=6.8e-23 Score=199.28 Aligned_cols=326 Identities=13% Similarity=0.063 Sum_probs=219.5
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCc-hhHHHHHHHHHHHHHHhhhhh------HHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSF------DFWSIAICR 133 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~------~~~~l~~~r 133 (503)
.+++|++..++|.+.++..+..++..|+.|+++|| +||| +.++.+.+..+++.++....+ .++.+++..
T Consensus 37 t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~~~~~ 116 (444)
T PRK09669 37 TDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYACVTY 116 (444)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 68899999999999999999999999999999998 7774 556677777777776554443 245666677
Q ss_pred HHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-------cchhHHHHHHHHHHHHHH
Q 010692 134 MLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-------HLNWRYAFWGEAILMLPF 205 (503)
Q Consensus 134 ~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-------~~gwr~~f~~~~~~~~~~ 205 (503)
++.+++.........++.+|+. ++++|++..++...+..+|..+++.+...+.. ..+|+..+.+.++++++.
T Consensus 117 ~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii~~v~ 196 (444)
T PRK09669 117 ILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLLGVVL 196 (444)
T ss_pred HHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 7777777777777889999998 55789998888888888888877765443321 347998998888887777
Q ss_pred HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692 206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 285 (503)
Q Consensus 206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (503)
.+..++..+|..+. ++++. .+..++++.++||
T Consensus 197 ~~~~~~~~~e~~~~----~~~~~--------------------------------------------~~~~~~~~~~~~n 228 (444)
T PRK09669 197 FFCCFFMTKERYTP----EVDNS--------------------------------------------SSVWKDLKLLLGN 228 (444)
T ss_pred HHHHhCCeEEecCC----CCcCC--------------------------------------------CCHHHHHHHHhCC
Confidence 66665554442110 00000 0112557788899
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (503)
|.++..++..++............+.|.+...+.......+.....+..+++.++.+++.||+++| +....+...
T Consensus 229 ~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~-----~~~~~~~~~ 303 (444)
T PRK09669 229 SQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLRPDLATLFLVTGMIAGLFGALLSERLLGKFDRV-----RAFKWTIVA 303 (444)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeeeeecCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHH
Confidence 998887776665545444333333444443333222222333444566778888999999999987 444444433
Q ss_pred HHHHHH-HHHH-hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhhH
Q 010692 366 GAISCL-TAFC-LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLV 436 (503)
Q Consensus 366 ~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~ 436 (503)
..+..+ .... .++.+..++..++.+++.+...+...+++.|.++ .+..|...|..+....+ |..+++.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G~r~~g~~~s~~~~~~kl-g~alg~~i~ 382 (444)
T PRK09669 304 FVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSGRRLDGLVFSTNLFAIKL-GLAIGGAVV 382 (444)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcCcCcchHHHHHHHHHHHH-HHHHHHHHH
Confidence 332222 2222 2345555555666777777777777777777664 23456778888777777 888999999
Q ss_pred HHHHhhhh
Q 010692 437 GVLQDHVN 444 (503)
Q Consensus 437 g~l~~~~g 444 (503)
|.+.+..|
T Consensus 383 g~ll~~~G 390 (444)
T PRK09669 383 GWILAWVD 390 (444)
T ss_pred HHHHHHcC
Confidence 99988765
No 102
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.91 E-value=1.4e-24 Score=182.38 Aligned_cols=366 Identities=10% Similarity=-0.026 Sum_probs=240.8
Q ss_pred hcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh-cCCchhHHH
Q 010692 30 SQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS-HNPFRLIGV 108 (503)
Q Consensus 30 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~ 108 (503)
.+|...+..+|+..|-..+ ..... ..+-.+.+.|.+++.++..++.++|+....+.+.++|++.|| +|-|..-++
T Consensus 40 ~hr~m~lv~mc~lgfgsyf---cyd~p-~alq~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii 115 (459)
T KOG4686|consen 40 GHRFMALVFMCLLGFGSYF---CYDAP-GALQIDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTII 115 (459)
T ss_pred hhHHHHHHHHHHhccccee---ecCCc-hhhhhhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHH
Confidence 3455555555665555544 22222 222255678889999999999999999999999999999996 588886666
Q ss_pred HHHHHHHHHHHhh---hhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692 109 GLSVWTFATAGCG---SSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 185 (503)
Q Consensus 109 ~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 185 (503)
-+....+|.++++ ..+.+|.+.++|++.|+|.-...++-+.+...||..|+.+.++|+.....-+|..+-..+.+++
T Consensus 116 ~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FGIGgESlAVaQN~yav~wFKGKELn~vfGlqlSvAR~GstvNf~lm~~l 195 (459)
T KOG4686|consen 116 LCIFVFLGQLIFAAGGISHAFWTMLAGRFLFGIGGESLAVAQNKYAVYWFKGKELNFVFGLQLSVARLGSTVNFLLMPFL 195 (459)
T ss_pred HHHHHHHHHHHHHhchHHHHHHHHHhhheeeccCchhhhhhhcceeEEEecCccccchhhHHHHHHHhhceeeeeecHHH
Confidence 6666667777765 4689999999999999999888899999999999999999999999999999998877777766
Q ss_pred cCcchh------H---HHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhh
Q 010692 186 GSHLNW------R---YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQAS 256 (503)
Q Consensus 186 ~~~~gw------r---~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (503)
.+..+- + ...+..+.......+.+....- . .++++++..+.+... .
T Consensus 196 y~~~~~~~~~~ghT~LG~~l~~~~~tc~~slical~lg-----~-~D~rAerilh~e~g~-------------------~ 250 (459)
T KOG4686|consen 196 YDTMGRMFPGVGHTLLGLWLCFEVKTCKQSLICALSLG-----L-SDDRAERILHLEEGF-------------------L 250 (459)
T ss_pred HHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHhh-----h-hhhHHHHHHhhhcCc-------------------c
Confidence 543221 0 1111111111111111111110 0 011111100000000 0
Q ss_pred hhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhh
Q 010692 257 ERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGI 335 (503)
Q Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 335 (503)
.+..+- .+.+ - -.|.+|.+.+.++++..+.+-+....|.++++.+|+++.++ .+.+.....+.
T Consensus 251 Ge~pkL--------------tdv~-~-f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~s~vy~Isa 314 (459)
T KOG4686|consen 251 GEEPKL--------------TDVN-T-FYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNILSTVYGISA 314 (459)
T ss_pred cCCccc--------------cccc-c-cCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchhhhhhhhhh
Confidence 000000 0000 0 24778888888999999999999999999999999998665 44556666777
Q ss_pred hchhhhhhhhhcccccchhhHHHHHHHHHHHH-HH-HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc
Q 010692 336 VGTISGGFILDQMGATISNAFKLLSAATFLGA-IS-CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR 413 (503)
Q Consensus 336 ~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (503)
+..++.|.++||.|++ .+.+.+..+.. .. ..+.+..-+++..+.+ .|.............+...+|+++.
T Consensus 315 v~spvfg~i~Dk~G~n-----~~wv~~a~~~tl~~H~~l~Ft~lsPy~~m~~---lGLsysllAcslWP~va~~vpE~qL 386 (459)
T KOG4686|consen 315 VLSPVFGAISDKYGFN-----LWWVASACILTLLGHSGLFFTFLSPYTSMTF---LGLSYSLLACSLWPCVASLVPEEQL 386 (459)
T ss_pred hhhhhHHHhHhhhcce-----ehhHHHHHHHHHHHhhhHHhhhccHHHHHHH---HhhhHHHHHHHHhhhhhhhCCHHHh
Confidence 8889999999999998 33333333222 22 2222222344443333 3333333223344456667788999
Q ss_pred hhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692 414 ALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 449 (503)
Q Consensus 414 ~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 449 (503)
|++.|.++...++ |-.+.|++.|.+.|.-|+|...
T Consensus 387 GTaygf~qsIqNL-gla~i~Iiag~i~d~~g~y~~l 421 (459)
T KOG4686|consen 387 GTAYGFIQSIQNL-GLAFIPIIAGFIADGDGSYDNL 421 (459)
T ss_pred cchHHHHHHHHhh-hhhHHhhhhheeecCCCchhhH
Confidence 9999999999999 9999999999999987766444
No 103
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.91 E-value=4e-22 Score=194.94 Aligned_cols=331 Identities=8% Similarity=-0.018 Sum_probs=219.9
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCC-chhHHHHHHHHHHHHHHhhhhh------HHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNP-FRLIGVGLSVWTFATAGCGSSF------DFWSIAICR 133 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~------~~~~l~~~r 133 (503)
.+.+|++..++|.+..+..+.-++..|+.|+++| |+|| |+.++++.+..+++..+....+ .+..+++.-
T Consensus 34 t~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~~~~ 113 (473)
T PRK10429 34 TDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVCVTY 113 (473)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHHHHH
Confidence 5678999999999999999999999999999999 6698 5667778888777766554322 244555666
Q ss_pred HHHHhhhhhhhhchhhhhhccC-CCCCchhHHHHHHhHHhHHHHHHHHHHHhh----c---CcchhHHHHHHHHHHHHHH
Q 010692 134 MLVGVGEASFISLAAPFIDDNA-PVPQKTAWLSMFYMCIPTGVALGYVYGGVV----G---SHLNWRYAFWGEAILMLPF 205 (503)
Q Consensus 134 ~l~G~g~~~~~~~~~~~i~~~~-~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l----~---~~~gwr~~f~~~~~~~~~~ 205 (503)
++.+++.....+...+++.|.. ++++|.+..++-..+.++|..+.+.+...+ . +..+|+....+.+++.++.
T Consensus 114 ~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~~~~ 193 (473)
T PRK10429 114 ILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFFIVS 193 (473)
T ss_pred HHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 7778888888888999999998 588999999987777777766665544332 1 1236888887877776666
Q ss_pred HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692 206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 285 (503)
Q Consensus 206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (503)
.+..++..||..+. ++.++.. +...+..+.++.+++|
T Consensus 194 ~~~~~~~~~e~~~~---~~~~~~~----------------------------------------~~~~~~~~~~~~~~~n 230 (473)
T PRK10429 194 TIITLRNVHEVYSS---DNQVSAE----------------------------------------GSHLTLKDIVALIYKN 230 (473)
T ss_pred HHHHHcCceecCCc---ccccccc----------------------------------------ccCCCHHHHHHHHhcC
Confidence 66666555552211 0000000 0000112445667789
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (503)
|.++..++..++..........+.+.|.+...+.......+.....+..+++.++.+++.||+|+| +.+..+..+
T Consensus 231 ~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk-----~~~~~~~~~ 305 (473)
T PRK10429 231 DQLSCLLGMALAYNIASNIINGFAIYYFTYVIGDADLFPYYLSYAGAANLVTLILFPRLVKSLSRR-----ILWAGASIF 305 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhheeeEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcH-----HHHHHHHHH
Confidence 888887777776666666666666666655444332222333445577788889999999999998 555444443
Q ss_pred HHHHHHHHHH-----hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccch
Q 010692 366 GAISCLTAFC-----LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 366 ~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
.++..+.... .++.+..++...+.+.+.+...+...++..|.++ .+..|...|.......+ |..+++
T Consensus 306 ~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~-~~al~~ 384 (473)
T PRK10429 306 PVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKG-GSAFAA 384 (473)
T ss_pred HHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHH-HHHHHH
Confidence 3322222211 2234444444555556666666666777777654 24456688888777777 888899
Q ss_pred hhHHHHHhhhh
Q 010692 434 PLVGVLQDHVN 444 (503)
Q Consensus 434 ~~~g~l~~~~g 444 (503)
.+.|++.+..|
T Consensus 385 ~i~g~~l~~~G 395 (473)
T PRK10429 385 FFIGVVLGLIG 395 (473)
T ss_pred HHHHHHHHHcC
Confidence 99999987665
No 104
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.91 E-value=6.3e-23 Score=199.06 Aligned_cols=372 Identities=13% Similarity=0.014 Sum_probs=235.2
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC-----CchhHHHHHHHHH-HHHHHhhhhhHHHHHH-HHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRLIGVGLSVWT-FATAGCGSSFDFWSIA-ICRM 134 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~l~~~~~~~~-~~~~~~~~~~~~~~l~-~~r~ 134 (503)
+-+.+++|++.++++...+...+...+-.+ +|+++||++ ||+.++++.++.+ ++....+..++..... +..+
T Consensus 50 ~~l~~~lg~s~~~i~~~~sl~~lpw~~K~l-~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~ 128 (468)
T TIGR00788 50 PMLTDDLGLDGARYQRLVGLSSLGWALKPF-AGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAFIF 128 (468)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHH-HHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHHHH
Confidence 334778999999999999999999999666 999999998 7778888877763 4444444445544444 4889
Q ss_pred HHHhhhhhhhhchhhhhhccCCCCCchhH---HHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692 135 LVGVGEASFISLAAPFIDDNAPVPQKTAW---LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~---~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
+.+++.+...++..+++.|..+ +++... .++.....++|.++|+.+++.+.+.++||..|++.+++.++..+ ..+
T Consensus 129 l~~~~~a~~dv~~da~~~e~~~-~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~-~~~ 206 (468)
T TIGR00788 129 LAALAKALYDVLVDSLYSERIR-ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLF-VSN 206 (468)
T ss_pred HHHHHHHHHHHhHHHHHhhhhh-cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHH-HHH
Confidence 9999999999999999999998 545443 33444445689999999999999989999999999888776633 344
Q ss_pred ccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHH
Q 010692 212 IKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVN 291 (503)
Q Consensus 212 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (503)
+.||.+....++.+++ . .... .... .......++..++.+..+++|.++..
T Consensus 207 ~~~E~~~~~~~~~~~~-~------------------~~~~-~~~~---------~~~~~~~~~~~~~l~~~l~~~~i~~~ 257 (468)
T TIGR00788 207 LSKERRAFVRPRIGTY-L------------------EMNM-ALLT---------LGVLANVKVQILGLRGAIQLLEIAKP 257 (468)
T ss_pred hccccccccccccccc-c------------------hhhh-hhhh---------hhHHHHHHHHHHHHHHHHhcHHHHHH
Confidence 4455321000000000 0 0000 0000 00000111112345556778888876
Q ss_pred HHHHHH-HHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692 292 VLGYIA-YNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 292 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
.+..++ +.........+ -.+..+..|.++... .......++.+++..+.+++.+|++.| +.+..+.++....
T Consensus 258 l~fifl~~~~~~~~~~~~-f~~~~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r-----~~l~~~~~l~~~~ 331 (468)
T TIGR00788 258 LIFIFLSYANLPGASGSV-FCATTQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYR-----LLFGVTTLLYTLS 331 (468)
T ss_pred HHHHHHHHhhcCCCCcee-EEEEcccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHH-----HHHHHHHHHHHHH
Confidence 554444 33222222111 113334567776544 333555677778888888887777766 5665555555443
Q ss_pred HHHHH-H---------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692 370 CLTAF-C---------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 370 ~~~~~-~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 439 (503)
.+... . .++.+.......+.++..+..+.+...++.+..|++.+|+..++.+...++ |..+++.++|.+
T Consensus 332 ~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~l-g~~v~~~~gg~l 410 (468)
T TIGR00788 332 SLFDLILVKRWNLAFGISDEVFVLGDSIIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHL-GSSVSGFLGVLL 410 (468)
T ss_pred HhCceeeeeccccccCCCCeeeeeehhHHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHH-HHHHHHHHHHHH
Confidence 32221 0 022223344455566677777888899999999999999999999988888 899999999999
Q ss_pred Hhhhh----hHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010692 440 QDHVN----NWRKTTLALTSIFFLAAGIWFVGIFLKS 472 (503)
Q Consensus 440 ~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (503)
.+..| +++.-+....+..+...+...+...+|+
T Consensus 411 ~~~~g~~~~~~~~~~~~i~i~~~~~l~~l~~~~llP~ 447 (468)
T TIGR00788 411 METIGITCDNSNNLWLLILGHSLAPLLPLPLLHLLPR 447 (468)
T ss_pred HHHcCCCcccccchHHHHHHHHHHHHHHHHHHHhCCC
Confidence 98776 2434444443443333333333335555
No 105
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.91 E-value=4.9e-22 Score=187.03 Aligned_cols=330 Identities=18% Similarity=0.124 Sum_probs=238.1
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC-CchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
+..-++.|.|..|+|.+.+...+...++++++|.++||++ +|+.+.+..++.++........++++.+++.-++..+..
T Consensus 26 ~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~~ 105 (400)
T PF03825_consen 26 PLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFFF 105 (400)
T ss_pred HHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 4445888999999999999999999999999999999986 577888888888887777788889999988888888888
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHH-HHhhcCcch---hHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY-GGVVGSHLN---WRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l-~~~l~~~~g---wr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
....|...++..+... ++++-.|-.....++|.+++... ++.+....+ ....+++.+...++..... +.+|+.
T Consensus 106 ~p~~pl~dsi~~~~~~--~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~-l~lp~~ 182 (400)
T PF03825_consen 106 SPTMPLSDSIALSYLG--DRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFA-LFLPKT 182 (400)
T ss_pred ccHHHHHHHHHHHHcc--cccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHH-HhCCCC
Confidence 8888888888888765 34455666777777777777543 223332222 2345666665544444333 334553
Q ss_pred cCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHH
Q 010692 217 LKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYI 296 (503)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (503)
+.+++.+++.+. ....+..+++|+|++....+..+
T Consensus 183 ~~~~~~~~~~~~---------------------------------------------~~~~~~~~llk~~~~~~Fll~~~ 217 (400)
T PF03825_consen 183 PPKRSAKESVKK---------------------------------------------LLGLDALKLLKNPRFLVFLLAAF 217 (400)
T ss_pred ccccccCCCccc---------------------------------------------ccchHHHHHhcCccHHHHHHHHH
Confidence 311111111000 00123457899999998888888
Q ss_pred HHHHHhhhhhccccchhhhhcccchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHH
Q 010692 297 AYNFVIGAYSYWGPKAGYNIYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFC 375 (503)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (503)
+.......+..+.+.|+++.++.+... ....++..++.++.-+..+++.+|++.+ +++..+.+..++-..+...
T Consensus 218 l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~-----~ll~~a~~~~~vR~~l~a~ 292 (400)
T PF03825_consen 218 LIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIK-----WLLLLALVAYAVRWLLYAY 292 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHH-----HHHHHHHHHHHHHHHHHHH
Confidence 888888888899999999977655333 2333556677888888899999999987 7777777777777666655
Q ss_pred h-hhHHHHHHHHH----HHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 376 L-SSLYGFLALFT----VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 376 ~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
. ++.+...+... +-+..++..+.....++.+..|++.|+++.++.+.....+|..+|..++|++.|..|
T Consensus 293 ~~~~~~~~~~~~~l~q~lhG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g 366 (400)
T PF03825_consen 293 FSDPWPFIVALQLLGQLLHGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFG 366 (400)
T ss_pred hcCCcHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhc
Confidence 5 34443333333 356777777778888999999999999999999887766699999999999999876
No 106
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.91 E-value=6.2e-26 Score=220.27 Aligned_cols=374 Identities=22% Similarity=0.369 Sum_probs=3.0
Q ss_pred cCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------
Q 010692 52 EDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------- 123 (503)
Q Consensus 52 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------- 123 (503)
..+......++.+++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-+|.++.++|++++++-
T Consensus 17 ~~~g~~~~~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~ 96 (539)
T PF03137_consen 17 MVSGYVNSSLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYS 96 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCc
Confidence 444455556688999999999999999999999999999999999999888889999999999999987651
Q ss_pred ------------------------------------------hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCch
Q 010692 124 ------------------------------------------FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKT 161 (503)
Q Consensus 124 ------------------------------------------~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~ 161 (503)
.-++.++++.++.|+|.+..++.+.+|+-|..++++-+
T Consensus 97 ~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~sp 176 (539)
T PF03137_consen 97 YEEASNSNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSP 176 (539)
T ss_dssp -------------------------------------------------------SSS----------------------
T ss_pred cccccccccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCc
Confidence 01456788999999999999999999999999999999
Q ss_pred hHHHHHHhHHhHHHHHHHHHHHhhcCc---------------------ch-hHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 162 AWLSMFYMCIPTGVALGYVYGGVVGSH---------------------LN-WRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 162 ~~~~~~~~~~~~G~~~g~~l~~~l~~~---------------------~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
..+|+......+|.++|.++++.+.+. .| |..-|++.+++.++.++..+.+ |+..+.
T Consensus 177 lYiGi~~~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~F-Pk~lp~ 255 (539)
T PF03137_consen 177 LYIGILYAMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFF-PKKLPG 255 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cchhhhhHHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcC-CccCCC
Confidence 999999999999999999999877531 12 7777777877777666665555 443322
Q ss_pred CC-cccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHH
Q 010692 220 FA-PAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAY 298 (503)
Q Consensus 220 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (503)
.. .+++.+.... +.++...+..++.+..+...+..+++++..+++++||.+....++....
T Consensus 256 ~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~ 317 (539)
T PF03137_consen 256 TSERQEEKESSER------------------KEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFE 317 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccchhhhhhc------------------chhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHH
Confidence 20 0111100000 0000000000000011112245577778899999999999999999999
Q ss_pred HHHhhhhhccccchhhhhcccchhhH--HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh
Q 010692 299 NFVIGAYSYWGPKAGYNIYHMSNADM--MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL 376 (503)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
.....++.+|+|.|++.+++.++..+ ....+...+.++|.+++|++.+|++-+.+...++.+...++..+........
T Consensus 318 ~~~~~G~~tF~pKylE~QF~~sas~A~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~ 397 (539)
T PF03137_consen 318 SFIVSGFATFLPKYLESQFGLSASQASLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFL 397 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHhCCCHHHHHHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHee
Confidence 99999999999999999999986544 3334445577889999999999997654433344444433333331111110
Q ss_pred ---------------------------------------------------hhHHHHHHHHHHHHHHHhhccchhhHHhh
Q 010692 377 ---------------------------------------------------SSLYGFLALFTVGELLVFATQAPVNYVCL 405 (503)
Q Consensus 377 ---------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 405 (503)
.....+++..++..+..+....+...+..
T Consensus 398 ~C~~~~~aGv~~~y~~~~~~~~~~~~~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~L 477 (539)
T PF03137_consen 398 GCPNPPIAGVTVPYHNSTSSSPSCNLTCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITL 477 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCCCceeeecCccccccCCCCCCCCCCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeee
Confidence 01123344444555555667778888889
Q ss_pred cccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 406 HSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 406 ~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+.+++++|+.|.|+.....+++|.+.+|+++|++.|..-
T Consensus 478 R~V~~~~rs~AlGv~~~~~rllg~IPgPIifG~iiD~tC 516 (539)
T PF03137_consen 478 RCVPPEQRSFALGVQWLIIRLLGFIPGPIIFGAIIDSTC 516 (539)
T ss_dssp ---------------------------------------
T ss_pred ccCChhhcchhhhHHHHHHHhhcCcchHHHHhHHHhhhh
Confidence 999999999999999999999999999999999999653
No 107
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.90 E-value=6.9e-22 Score=188.05 Aligned_cols=366 Identities=13% Similarity=0.038 Sum_probs=242.1
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCCchhHHHH-HHHHHHHHHHhhhhhHHH---------
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLIGVG-LSVWTFATAGCGSSFDFW--------- 127 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l~~~-~~~~~~~~~~~~~~~~~~--------- 127 (503)
+++.+++|.+..+.+++..+..+...+.+++.|+++| |+||||.++++ .....++.++.+++++++
T Consensus 28 ~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~~ 107 (477)
T TIGR01301 28 TPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLDK 107 (477)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhccccccc
Confidence 4556889999999999999999999999999999999 59999988774 666667777777776643
Q ss_pred --------HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCc--hhHHHHHHhHHhHHHHHHHHHHHhh--cCc-------
Q 010692 128 --------SIAICRMLVGVGEASFISLAAPFIDDNAPVPQK--TAWLSMFYMCIPTGVALGYVYGGVV--GSH------- 188 (503)
Q Consensus 128 --------~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r--~~~~~~~~~~~~~G~~~g~~l~~~l--~~~------- 188 (503)
.++++-.+..++.....+...++++|.+|+++| +.+.++.+...++|.++|+.++++. .+.
T Consensus 108 ~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~~~ 187 (477)
T TIGR01301 108 KTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTKTE 187 (477)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccccc
Confidence 223333344557777888899999999998865 5799999999999999999999875 211
Q ss_pred ------chhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcc
Q 010692 189 ------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKS 262 (503)
Q Consensus 189 ------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (503)
.+.|+.|++.+++.++..++..+..||.+... +++.+.. + .++.. +.+.
T Consensus 188 ~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~--~~~~~~~---~-----------------~~~~~--~~~~- 242 (477)
T TIGR01301 188 ACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIG--SDDFINS---E-----------------AAPPS--KHGE- 242 (477)
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCc--cccchhh---h-----------------ccccc--ccch-
Confidence 16789999999888888888888777744211 0000000 0 00000 0000
Q ss_pred cchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhh-hcccch-------hh---H-HHHHhh
Q 010692 263 IGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYN-IYHMSN-------AD---M-MFGGVT 330 (503)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-------~~---~-~~~~~~ 330 (503)
....++.++.++++ .|.++.+++..++...+.+.+..|.+.+..+ .++.++ .. . .-..+.
T Consensus 243 ------~~~~~~i~~~~~~m--P~~m~~l~~vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~ 314 (477)
T TIGR01301 243 ------EAFFGELFGAFKYL--PRPVWILLLVTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLN 314 (477)
T ss_pred ------hhhHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHH
Confidence 01112222333322 3677888888888888888888887776653 443221 11 1 112333
Q ss_pred hhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh---------------------HHHHHHHHHHH
Q 010692 331 IVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS---------------------LYGFLALFTVG 389 (503)
Q Consensus 331 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~ 389 (503)
.+...+.+++..++.+|+|+|+ .....+.++.+..+.......+ .+..++.+.+.
T Consensus 315 s~~~~i~s~~l~~l~~~~g~~k----~~~~~s~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 390 (477)
T TIGR01301 315 SVVLGITSIGMEKLCRGWGAGK----RLWGIVNIILAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAIL 390 (477)
T ss_pred HHHHHHHHHHHHHHHHHhccch----hHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHh
Confidence 4444556667777888887531 3434444444433333332221 25566677777
Q ss_pred HHHHhhccchhhHHhhcccCC--CCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhH-HHHHHHHHHHHHHHHHHHH
Q 010692 390 ELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW-RKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~-~~~~~~~~~~~~~~~~~~~ 465 (503)
|+.....+..-++++.+..++ +..|..+|+.|.+..+ .+++.....|.+.+..|+. ..++.+.++..+++.++..
T Consensus 391 Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~l-pQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~ 468 (477)
T TIGR01301 391 GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVI-PQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLAL 468 (477)
T ss_pred hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHH-HHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHH
Confidence 777777777778888888885 5669999999998888 8888888888877766632 3445555555555554443
No 108
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.90 E-value=1.7e-21 Score=178.62 Aligned_cols=276 Identities=12% Similarity=0.086 Sum_probs=199.1
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc------------
Q 010692 121 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH------------ 188 (503)
Q Consensus 121 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~------------ 188 (503)
+..++|+.++++-++.|.|.+...+..+.++++..++|++++.+++.+..+++|..++|.+++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~~ 84 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVATA 84 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhhh
Confidence 35678999999999999999999999999999999999999999999999999999999999987621
Q ss_pred ----chhHHHHHHHHHHHHHHHHHHHhcc-ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhccc
Q 010692 189 ----LNWRYAFWGEAILMLPFAVLAFVIK-PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSI 263 (503)
Q Consensus 189 ----~gwr~~f~~~~~~~~~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (503)
..|+++|++.+.+.++..+++.+.. ||..+ ++.+... + ++ .
T Consensus 85 ~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~-----~~~~~~~------------------~-------~~--~-- 130 (310)
T TIGR01272 85 NAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQE-----ADVARVS------------------S-------GD--T-- 130 (310)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCc-----ccccccc------------------c-------cc--c--
Confidence 4799999977776555555444332 33110 0000000 0 00 0
Q ss_pred chhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhh--cccchhhH-HHHHhhhhhhhhchhh
Q 010692 264 GESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTIS 340 (503)
Q Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~ 340 (503)
...+..+++|.++...+..+++.....++..|.+.|+.+. ++.++... ...+....+.++|+++
T Consensus 131 -------------~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~ 197 (310)
T TIGR01272 131 -------------TQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFLVNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFI 197 (310)
T ss_pred -------------cchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 0012345778888888888888888999999999999864 57776544 4557778899999999
Q ss_pred hhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHH
Q 010692 341 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIS 420 (503)
Q Consensus 341 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 420 (503)
++++.||+++| +.+..+..++++..++....+... ......+.+++.+..+|...+...+..|+ +.+++.++.
T Consensus 198 ~~~l~~r~g~~-----~~l~~~~~l~~~~~~l~~~~~~~~-~~~~~~l~g~~~s~i~P~~~s~a~~~~~~-~~~~asai~ 270 (310)
T TIGR01272 198 GSAVMPMISQG-----RYLAFNAFLAVLLSIGAALTHGYV-AMWFVLALGLFNSIMFPTIFSLALNALGR-HTSQGSGIL 270 (310)
T ss_pred HHHHHHHhCHH-----HHHHHHHHHHHHHHHHHHHcCCHH-HHHHHHHHHHHHHHHHHHHHHHHHhhhhh-hhhhhHHHH
Confidence 99999999987 555555544444443333333322 23355567788888889888888888765 356666775
Q ss_pred HHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692 421 TVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 453 (503)
Q Consensus 421 ~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 453 (503)
....+ |+.+.|++.|.+.|..| .+.++++.
T Consensus 271 -~~~~~-Gg~i~P~l~G~lad~~g-~~~a~~v~ 300 (310)
T TIGR01272 271 -CLAIV-GGAIVPLLQGSLADCLG-IQLAFALP 300 (310)
T ss_pred -HHHHh-cchHHHHHHHHHHHhcc-chHHHHHH
Confidence 45555 88999999999999877 55666543
No 109
>PRK09848 glucuronide transporter; Provisional
Probab=99.89 E-value=7.6e-21 Score=185.28 Aligned_cols=325 Identities=10% Similarity=-0.003 Sum_probs=207.7
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc----CCchh-HHHHHHHHHHHHHHh-hh----hh--HHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH----NPFRL-IGVGLSVWTFATAGC-GS----SF--DFWSIAIC 132 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~----Grr~~-l~~~~~~~~~~~~~~-~~----~~--~~~~l~~~ 132 (503)
.+.+|++..++|.+.+...+..++..++.|+++||. ||||. +..+.+...+..++. .. ++ ..+.+++.
T Consensus 36 ~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (448)
T PRK09848 36 TDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYAYLT 115 (448)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHHHHH
Confidence 677899999999999999999999999999999996 66664 455555444444332 11 11 22334455
Q ss_pred HHHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhH-----HhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHH
Q 010692 133 RMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMC-----IPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLP 204 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~-----~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~ 204 (503)
-++.+++.+...+...++..+..+ +++|.+..++-..+ ..+|..++|.+++...+.. +|.....+.++++++
T Consensus 116 ~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~~~~ 195 (448)
T PRK09848 116 YMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIAGMV 195 (448)
T ss_pred HHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHH
Confidence 667788888888888888787765 46788876666543 3355566666665443221 222222233333333
Q ss_pred HHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhh
Q 010692 205 FAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQ 284 (503)
Q Consensus 205 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (503)
..++.....||..+. ++++ ....+.++.+++
T Consensus 196 ~~~~~~~~~~e~~~~----~~~~---------------------------------------------~~~~~~~~~l~~ 226 (448)
T PRK09848 196 LYFICFKSTRENVVR----IVAQ---------------------------------------------PSLKISLQTLKR 226 (448)
T ss_pred HHHHHHcCcEeccCC----CccC---------------------------------------------CCHHHHHHHHhC
Confidence 333333333332110 0000 011245678899
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHH-HhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFG-GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (503)
||.++...+..++............|.|+++..+.++....+. ....++.+++.++.+++.||+++| +.+..+.
T Consensus 227 n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~-----~~~~~g~ 301 (448)
T PRK09848 227 NRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKK-----NTFLIGA 301 (448)
T ss_pred CchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcH-----HHHHHHH
Confidence 9999988887777777777777788888888777765433332 222456677888999999999987 5555555
Q ss_pred HHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC-------CchhHHHHHHHHHhhcccccchh
Q 010692 364 FLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS-------LRALSMAISTVSIHIFGDVPSSP 434 (503)
Q Consensus 364 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~g~~~~~~ 434 (503)
.+..+..+..... .+.+.......+.+.+.+...+...++..+..+.+ .+|...|+.+....+ |..+++.
T Consensus 302 ~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~kl-g~aig~~ 380 (448)
T PRK09848 302 LLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKC-GQAIGGS 380 (448)
T ss_pred HHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHH-HHHHHHH
Confidence 4444433333332 23444444455566666666777777777766542 468899998887777 8888999
Q ss_pred hHHHHHhhhh
Q 010692 435 LVGVLQDHVN 444 (503)
Q Consensus 435 ~~g~l~~~~g 444 (503)
+.|.+.+..|
T Consensus 381 i~g~~l~~~G 390 (448)
T PRK09848 381 IPAFILGLSG 390 (448)
T ss_pred HHHHHHHHcC
Confidence 9998877654
No 110
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.89 E-value=1.1e-21 Score=180.51 Aligned_cols=361 Identities=15% Similarity=0.128 Sum_probs=234.1
Q ss_pred cCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH--HH-HHhhhh----h
Q 010692 52 EDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF--AT-AGCGSS----F 124 (503)
Q Consensus 52 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~--~~-~~~~~~----~ 124 (503)
...+..+.++ +++.|+|.+++|.+.++..+...+.+|+.|.++||.|.||-++..+.+..+ +. ....+. .
T Consensus 25 i~~pF~~iWL---~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~ 101 (412)
T PF01306_consen 25 IFLPFFPIWL---TQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQS 101 (412)
T ss_dssp HHHHHHHHHH---HHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHH---ccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344445555 456899999999999999999999999999999999977765544433221 22 222222 2
Q ss_pred HHH-HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHH
Q 010692 125 DFW-SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILML 203 (503)
Q Consensus 125 ~~~-~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~ 203 (503)
|++ ..+++-+..|+......|..-+++.++.. +.+.=.|-.....++|.+++..++|.+.+ .+-+..||+....++
T Consensus 102 n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr--~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~ 178 (412)
T PF01306_consen 102 NFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR--RNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAI 178 (412)
T ss_dssp T-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH--HHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH--HhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHH
Confidence 222 22333333444444455556666655532 23445677788899999999999999886 356778888777766
Q ss_pred HHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692 204 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 283 (503)
Q Consensus 204 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (503)
+..++.++..|+..+.....+..+.. +.+...++..+++
T Consensus 179 il~lll~~~~~~~~~~~~~~~~~~~~-----------------------------------------~~~~~~~~~~~l~ 217 (412)
T PF01306_consen 179 ILLLLLLLLKPDVPPQAEVADALGAK-----------------------------------------KDKVSLKDVLSLF 217 (412)
T ss_dssp HHHHHHHSS---SSSSS-SSTTSSS-----------------------------------------------HHHHHHHT
T ss_pred HHHHHHHHcCCcCchhhhhhcccccC-----------------------------------------CCCCcHHHHHHHh
Confidence 66666555554432221111100000 0000125567889
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhh---H-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692 284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD---M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 359 (503)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (503)
|+|++|.+.+........+..+....|.|....+.....+ . .+.++..+..++.-.+..++.+|+|.| +.+
T Consensus 218 k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k-----~~L 292 (412)
T PF01306_consen 218 KMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAK-----NLL 292 (412)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-----HHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChH-----hHH
Confidence 9999999888666655666666555666666544332211 1 334556677788888999999999998 788
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692 360 SAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 439 (503)
+....+..+-.......++.+.....=.+-+.-.........-++.+.+|++..++...+.......+|.++.+.+.|.+
T Consensus 293 llag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~l 372 (412)
T PF01306_consen 293 LLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYL 372 (412)
T ss_dssp HHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhh
Confidence 88888888888877778888888888788888777778888899999999999899888864444334888888899999
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 440 QDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 440 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
+|..| ++.+|++++.+.+...++..
T Consensus 373 yd~~G-~~~tylimg~iv~~~~li~~ 397 (412)
T PF01306_consen 373 YDRIG-FQHTYLIMGLIVLPFTLISA 397 (412)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHHHH
T ss_pred HhhcC-cHHHHHHHHHHHHHHHHHhe
Confidence 99998 77788887776554444443
No 111
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=1.5e-20 Score=179.71 Aligned_cols=147 Identities=14% Similarity=0.128 Sum_probs=122.0
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~~~ 142 (503)
.+++|+++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++.+..+ +...++++..+.++|.|.
T Consensus 37 ~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~ 116 (493)
T PRK15462 37 TNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGL 116 (493)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccc
Confidence 567899999999999999999999999999999999 999999999999999988776543 223344444555566777
Q ss_pred hhhchhhhhhccCCCC--CchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 143 FISLAAPFIDDNAPVP--QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~--~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
..+...++++|.+|++ +|..++++...+.++|..++|.+.+++.+..|||+.|.+.++. .+..++.++.
T Consensus 117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaig-m~l~li~~~~ 187 (493)
T PRK15462 117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVG-MIAGLVIFLC 187 (493)
T ss_pred ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHH-HHHHHHHHHH
Confidence 7788889999999875 6899999999999999999999999999989999999987664 3444444433
No 112
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.88 E-value=4.2e-21 Score=185.84 Aligned_cols=328 Identities=16% Similarity=0.136 Sum_probs=251.9
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCCch-hHHHHHHHHHHHHHHhhhh-h-------HHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFR-LIGVGLSVWTFATAGCGSS-F-------DFWSIAI 131 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~-~l~~~~~~~~~~~~~~~~~-~-------~~~~l~~ 131 (503)
.+.+|+++..+|.+..+..+..++..|+.|.++| |+|||| .+++|....+++.++.... + ....+++
T Consensus 29 ~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~~~~~ 108 (428)
T PF13347_consen 29 TDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLVWLFV 108 (428)
T ss_pred HHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHHHHHH
Confidence 6778999999999999999999999999999999 899766 5667888888888877765 4 2334567
Q ss_pred HHHHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-------chhHHHHHHHHHHHH
Q 010692 132 CRMLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILML 203 (503)
Q Consensus 132 ~r~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~ 203 (503)
.-++..++.........++..|..+ +++|.+..++-+.+..+|..+...+.+.+.+. .+|++..++.+++.+
T Consensus 109 ~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~iv~~ 188 (428)
T PF13347_consen 109 FYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLAIVGL 188 (428)
T ss_pred HHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHHHHHH
Confidence 7777799999999999999999997 56899999999999999987666666655421 169999999999988
Q ss_pred HHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHh
Q 010692 204 PFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLL 283 (503)
Q Consensus 204 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (503)
+..++..+..+|..+.. +++++ ..+..+.++.++
T Consensus 189 v~~~i~~~~~ke~~~~~--~~~~~--------------------------------------------~~~~~~~~~~~~ 222 (428)
T PF13347_consen 189 VFFLITFFFVKERSVEV--TEQEK--------------------------------------------KISLRDSLRSLF 222 (428)
T ss_pred HHhhhhhheeeeccccc--ccccc--------------------------------------------ccccccchhhhc
Confidence 88888887776611110 00000 011124577888
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692 284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363 (503)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (503)
+||.++...+..++............+.|.++..+.+.....+..+..++.+++.++.++++||+|+| +....+.
T Consensus 223 ~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~-----~~~~~~~ 297 (428)
T PF13347_consen 223 RNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNEGLISIFMLIFFVASIVGSPLWGRLSKRFGKK-----KVYIIGL 297 (428)
T ss_pred ccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHHHHHHHHccce-----eehhhhH
Confidence 99999988888888888877777788888888777775444555667788899999999999999998 6666666
Q ss_pred HHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC-------CCchhHHHHHHHHHhhcccccchh
Q 010692 364 FLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP-------SLRALSMAISTVSIHIFGDVPSSP 434 (503)
Q Consensus 364 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~g~~~~~~~~~g~~~~~~ 434 (503)
.+.+...+..... ++.+...+..++.+.+.+..+....++..|..+. +..|...|+.+..... +..+++.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~-~~~la~~ 376 (428)
T PF13347_consen 298 LLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKI-GQGLAGA 376 (428)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhcCCCchHHHHHhhhhhhHH-HHHHHHH
Confidence 6655555554444 4777788888888888888888778888877653 4468888888888887 8888898
Q ss_pred hHHHHHhhhh
Q 010692 435 LVGVLQDHVN 444 (503)
Q Consensus 435 ~~g~l~~~~g 444 (503)
+.|.+.+..|
T Consensus 377 i~g~~l~~~G 386 (428)
T PF13347_consen 377 IVGLLLALVG 386 (428)
T ss_pred HHHHHHHHhC
Confidence 8998877654
No 113
>PRK11462 putative transporter; Provisional
Probab=99.87 E-value=7.2e-20 Score=177.71 Aligned_cols=325 Identities=13% Similarity=0.031 Sum_probs=205.0
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCch-hHHHHHHHHHHHHHHhhhhhH------HHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPFR-LIGVGLSVWTFATAGCGSSFD------FWSIAICR 133 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r 133 (503)
.+.+|+++..+|.+..+.-+.-++.-|+.|.++|| +|||| .++++.+..+++.+++-..++ +..+++.-
T Consensus 37 t~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~~~~ 116 (460)
T PRK11462 37 TDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAAITY 116 (460)
T ss_pred HHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHH
Confidence 57789999999999999999999999999999995 68765 556677777777766654442 34455666
Q ss_pred HHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc-------chhHHHHHHHHHHHHHH
Q 010692 134 MLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPF 205 (503)
Q Consensus 134 ~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~~~ 205 (503)
++..++.........++..|..+ ++||++..++...+..+|..+++.+...+.+. .+|+....+.+++.++.
T Consensus 117 ~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~~i~ 196 (460)
T PRK11462 117 TLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVAFMM 196 (460)
T ss_pred HHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHHHHH
Confidence 67788888888889999999987 77899999999999999988887775544322 36888888887776666
Q ss_pred HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692 206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 285 (503)
Q Consensus 206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (503)
.++++...+|..+. ++++ .+..+.++..++|
T Consensus 197 ~~i~~~~~kE~~~~----~~~~---------------------------------------------~~~~~~l~~~~~N 227 (460)
T PRK11462 197 LAFCFFTTKERVEA----PPTT---------------------------------------------TSMREDLRDIWQN 227 (460)
T ss_pred HHHHHhcceeccCC----CccC---------------------------------------------CCHHHHHHHHhCC
Confidence 66555544442110 0000 0012456778888
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (503)
|.++..+...++..............|.....+.......+.....++.+++.++++++.||+++| +........
T Consensus 228 k~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~~~~~~~l~~~~i~~iig~~l~~~l~~r~gkk-----~~~~~~~~~ 302 (460)
T PRK11462 228 DQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTPEVFVAFLTTYCVGNLIGSALAKPLTDWKCKV-----TIFWWTNAL 302 (460)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhChH-----HHHHHHHHH
Confidence 888777655544444433333333333333334333222344556677888899999999999987 443322222
Q ss_pred HHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhhH
Q 010692 366 GAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPLV 436 (503)
Q Consensus 366 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~~ 436 (503)
..+..+..... .+.....+..++.+++.+...+....+..+..+ .+..|...+.......+ |..+++.+.
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Kl-g~alg~~i~ 381 (460)
T PRK11462 303 LAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKL-GLAFGGALI 381 (460)
T ss_pred HHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHH-HHHHHHHHH
Confidence 22211122222 222223333344444444444333445554433 22334445666566777 888888888
Q ss_pred HHHHhhhh
Q 010692 437 GVLQDHVN 444 (503)
Q Consensus 437 g~l~~~~g 444 (503)
|++.+..|
T Consensus 382 g~iL~~~G 389 (460)
T PRK11462 382 GWMLAYGG 389 (460)
T ss_pred HHHHHHcC
Confidence 88877643
No 114
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=2e-20 Score=168.18 Aligned_cols=347 Identities=14% Similarity=0.093 Sum_probs=263.9
Q ss_pred ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-hHHHHHHHHHHHHHHhhhhhH---HHHHHHHHHHHHhhhhhhhhch
Q 010692 72 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFD---FWSIAICRMLVGVGEASFISLA 147 (503)
Q Consensus 72 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~---~~~l~~~r~l~G~g~~~~~~~~ 147 (503)
.+.++...++..+..++.+|+.|.++|+.|+|| .+-....+..+++.+..++++ ++..++.-.+..++.....+..
T Consensus 57 ~a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfy 136 (438)
T COG2270 57 TAYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFY 136 (438)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheeh
Confidence 345688899999999999999999999999665 455555566666666676654 4455567788889998899999
Q ss_pred hhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH--Hhh-c---------------CcchhHHHHHHHHHHHHHHHHHH
Q 010692 148 APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG--GVV-G---------------SHLNWRYAFWGEAILMLPFAVLA 209 (503)
Q Consensus 148 ~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~--~~l-~---------------~~~gwr~~f~~~~~~~~~~~~~~ 209 (503)
.+++.+..++++-++..+.-.....+|..+.-+.. ... . +...-|..+.+.++-.++..+-.
T Consensus 137 ds~L~~~~~k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 137 DSMLPRLTTKDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hhHhhhhcCccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999999999888888877777777776654442 111 1 22346777888777766666666
Q ss_pred HhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHH
Q 010692 210 FVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYV 289 (503)
Q Consensus 210 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (503)
++..|+..+.. .++ .+......++.+.+++++.+++.+.
T Consensus 217 ~~~v~~~~~~~-~~~----------------------------------------~~~l~~g~k~L~~t~k~i~~~~~i~ 255 (438)
T COG2270 217 ILNVHDAEKIS-SPP----------------------------------------PTALRNGFKELKSTFKEIRGRKNLV 255 (438)
T ss_pred Hhccccccccc-ccc----------------------------------------hHHHHHHHHHHHHHHHHHhcccchH
Confidence 66554422110 000 0111245566667888999999999
Q ss_pred HHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHH
Q 010692 290 VNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAI 368 (503)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 368 (503)
..+++.+++.-+.+++..+...|....+|.+..+. .+.....+.+++|+++.|++.||++.| +++..+.++...
T Consensus 256 ~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k-----~vl~~~lvi~~~ 330 (438)
T COG2270 256 LFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSK-----PVLMIGLVILSI 330 (438)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCc-----eeehHHHHHHHH
Confidence 99999999999999999999999998899997766 555677899999999999999999998 666666666666
Q ss_pred HHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHH
Q 010692 369 SCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRK 448 (503)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~ 448 (503)
.++..........+..+..+.+.+.+..+...-++..+.+|+++.++..|+++..... +.+.||.+.+.+.+.+|+.+.
T Consensus 331 ~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k~~~fFglyaltgra-~S~~gp~lv~v~t~iTg~~r~ 409 (438)
T COG2270 331 AALYLIFLEGELDFWILGLLVGTSLGGAQASSRSYLARLVPKGKEGRFFGLYALTGRA-ASFLGPFLVAVITQITGSSRA 409 (438)
T ss_pred HHHHHHHccccHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCccccceeehhhhhhhH-HHHHHHHHHHHHHHHhcchhh
Confidence 6655555555555666667777888888888999999999999999999999988888 889999999999999998877
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010692 449 TTLALTSIFFLAAGIWF 465 (503)
Q Consensus 449 ~~~~~~~~~~~~~~~~~ 465 (503)
.+....++..++..+..
T Consensus 410 g~~~i~vll~iGl~~L~ 426 (438)
T COG2270 410 GVLSIIVLLLIGLLLLL 426 (438)
T ss_pred HHHHHHHHHHhhHhhEE
Confidence 77777666666655444
No 115
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.87 E-value=1.1e-20 Score=170.55 Aligned_cols=365 Identities=13% Similarity=0.057 Sum_probs=248.7
Q ss_pred hhhcccccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHH
Q 010692 28 SKSQSLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG 107 (503)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~ 107 (503)
..+|||..++..++..+...+ .......+-......|+ +....-|+.-+|++.+....+++-|+.|++|-|..++
T Consensus 39 Vy~rRW~vLl~~slL~~SN~~----qWI~ya~i~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~l 113 (480)
T KOG2563|consen 39 VYPRRWVVLLAFSLLNFSNGM----QWIQYAPINNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALL 113 (480)
T ss_pred cchhHhHHHHHHHHHHhcCcc----hheeehhHHHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHH
Confidence 456778777766666665544 22223333234456677 7777889999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhh------hHHH--HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHH
Q 010692 108 VGLSVWTFATAGCGSS------FDFW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGY 179 (503)
Q Consensus 108 ~~~~~~~~~~~~~~~~------~~~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~ 179 (503)
++..+.++|..+-..+ +.++ ..+.+..+.+.+.-.+......+..-||+++||..+..+-.++..+|.++|.
T Consensus 114 lgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 114 LGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 9999999999987665 3455 6778999999888877777778888899999999999999999999999999
Q ss_pred HHHHhhcCc------chhHH--HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692 180 VYGGVVGSH------LNWRY--AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 251 (503)
Q Consensus 180 ~l~~~l~~~------~gwr~--~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (503)
++...+..+ ..|.. .|+...+++.+..++..+..++.++. ++.......
T Consensus 194 llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~l~~~~~~~~P~t--Pps~s~~~~--------------------- 250 (480)
T KOG2563|consen 194 LLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLALVLFVFTKKPPT--PPSASQAAL--------------------- 250 (480)
T ss_pred hccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCC--CCchhHhhh---------------------
Confidence 998888743 34654 35555555544444444444432221 111111100
Q ss_pred chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhh
Q 010692 252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTI 331 (503)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (503)
.-.++.++.+++++++++....+++......+++..+.+...+...+-.+..+.....+..
T Consensus 251 -------------------~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~sgY~~~~aG~ig~l~i 311 (480)
T KOG2563|consen 251 -------------------QDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCPSGYEGVFAGYIGALMI 311 (480)
T ss_pred -------------------hcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhccccccCCccccchhHHHHH
Confidence 0012347788999999999999888887777877777666444332222223345566777
Q ss_pred hhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692 332 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHS 407 (503)
Q Consensus 332 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (503)
++++++.++.|.+.||.+.-+ ..............+.+... ...+.+.....+.+++.....|....+..|.
T Consensus 312 v~Gmlga~~~gii~Dktk~fk----~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~ElgvE~ 387 (480)
T KOG2563|consen 312 VAGMLGALASGIIADKTKKFK----LTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFELGVET 387 (480)
T ss_pred HHHHHHHHHHHhhhhhhhhHH----HHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceeeeeee
Confidence 889999999999999987652 22222222222221111111 2333444555566666667778778888888
Q ss_pred cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 408 VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
..|..-++..|+.+...++++.. -.++.+...+..+
T Consensus 388 TyPv~E~tSsGll~~~gq~f~~~-~~~~~~~~~~~~~ 423 (480)
T KOG2563|consen 388 TYPVAEGTSSGLLNLSGQIFGVI-LVFIMGILAEDLG 423 (480)
T ss_pred ccccCCcccceeEEeehhHHHHH-HHHHHHHHhhccC
Confidence 88887888889988887775544 4666676666554
No 116
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.82 E-value=1.6e-17 Score=154.76 Aligned_cols=330 Identities=10% Similarity=0.031 Sum_probs=241.2
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhh----cCCc-hhHHHHHHHHHHHHHHhhhhhH------HHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKS----HNPF-RLIGVGLSVWTFATAGCGSSFD------FWSIAICR 133 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r 133 (503)
.+.+|+++..+|.+..+.-+--++.-|+.|.+.|| +||+ +.++.+.+..++.+.++-.+++ ..-.++.-
T Consensus 40 Tdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~vtY 119 (467)
T COG2211 40 TDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALVTY 119 (467)
T ss_pred hcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHHHH
Confidence 67789999999999999999999999999999995 6764 4678888888888888877763 44456677
Q ss_pred HHHHhhhhhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhc-----C--cchhHHHHHHHHHHHHHH
Q 010692 134 MLVGVGEASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVG-----S--HLNWRYAFWGEAILMLPF 205 (503)
Q Consensus 134 ~l~G~g~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-----~--~~gwr~~f~~~~~~~~~~ 205 (503)
.+.+++.........++..|..+ ++||.+..++-+.+.++|..+...+...+. + ..||+..-.+.++++.+.
T Consensus 120 ~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~i~ 199 (467)
T COG2211 120 MLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGVIL 199 (467)
T ss_pred HHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHHHH
Confidence 88889999888889999999975 678999999999999999777665554443 2 458999999999998888
Q ss_pred HHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhh
Q 010692 206 AVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQE 285 (503)
Q Consensus 206 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (503)
.+.+++-.+|...+..+.++.. .++...++..+++|
T Consensus 200 ~l~~~~~v~ER~~~~~~~~~~~--------------------------------------------~~~~~~~~~~~~~N 235 (467)
T COG2211 200 LLFCFFNVKERVVETQPTKTGV--------------------------------------------KLKLKDSFLLIFKN 235 (467)
T ss_pred HHHHHHHhhcccCccccCcccc--------------------------------------------cccHHHHHHHHHcc
Confidence 8888887766433111111000 01112445678899
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (503)
|.+...++..++.....+........|.+...+.++... ........+.+++.++..++.+|+|+| ++..++.+
T Consensus 236 rp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk-----~~~~~~~~ 310 (467)
T COG2211 236 RPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKK-----KLFLIGLL 310 (467)
T ss_pred chHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchH-----HHHHHHHH
Confidence 999998887777777777777777777776666665433 333344455566688999999999999 77777777
Q ss_pred HHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhHHhhcccC-------CCCchhHHHHHHHHHhhcccccchhh
Q 010692 365 LGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNYVCLHSVK-------PSLRALSMAISTVSIHIFGDVPSSPL 435 (503)
Q Consensus 365 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~g~~~~~~~ 435 (503)
+.++..+.....+ +....++..++.+.+.+...+...+++.+.+. .+..|...|....+... |..++..+
T Consensus 311 ~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~-g~ala~~~ 389 (467)
T COG2211 311 LLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKL-GLALAGFI 389 (467)
T ss_pred HHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHH-HHHHHHHH
Confidence 6666666555554 44555555566667777666666666665432 24567788888777777 88888889
Q ss_pred HHHHHhhhh
Q 010692 436 VGVLQDHVN 444 (503)
Q Consensus 436 ~g~l~~~~g 444 (503)
.|++.+..|
T Consensus 390 ~g~~L~~~G 398 (467)
T COG2211 390 PGWILGAIG 398 (467)
T ss_pred HHHHHHHcC
Confidence 999887665
No 117
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.80 E-value=1.6e-17 Score=153.14 Aligned_cols=391 Identities=13% Similarity=0.115 Sum_probs=227.4
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEA 141 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~ 141 (503)
.+.+|+++++..-+.++|..-.-+..+++|+++||+ |+|+++..|.++..+|.++.+.+. +...++++-.+.++|.|
T Consensus 53 ~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~G 132 (498)
T COG3104 53 GDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTG 132 (498)
T ss_pred cccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccc
Confidence 344669999998889999888889999999999998 999999999999999999999884 78899999999999999
Q ss_pred hhhhchhhhhhccCCCCC--chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 142 SFISLAAPFIDDNAPVPQ--KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~--r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
.+-+...++++|.+|+++ |-..++++.++.++|+.++|++.+++.+.+||+..|-+.++-.....+. +...+++...
T Consensus 133 l~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~-f~~~~r~~~~ 211 (498)
T COG3104 133 LFKPNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVI-FLLGRRHVKG 211 (498)
T ss_pred cccccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHH-HHHccchhcC
Confidence 999999999999998663 6678999999999999999999999999999999999888765544444 4443433322
Q ss_pred CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhh----------h---hhhhhchH--HHHHHHhh
Q 010692 220 FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESR----------F---LNQLSQFS--QDTKVLLQ 284 (503)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~--~~~~~~~~ 284 (503)
...+++........... ........+-..........+.... . .+..+... .+.++++.
T Consensus 212 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~ 285 (498)
T COG3104 212 IGGVPDPNPLSFNFLLP------VLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLA 285 (498)
T ss_pred CCCCCCccchhhhhhhh------hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHH
Confidence 21111111110000000 0000000000000000000000000 0 00000000 11111110
Q ss_pred -hhhHHHHHHHHHHHHHHhhhhhccccchhhhh-cccchhhHHHHHhhhhhhhhchhhhhhhhhccccc---chhhHHHH
Q 010692 285 -EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI-YHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT---ISNAFKLL 359 (503)
Q Consensus 285 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~---~~~~~~~~ 359 (503)
-+.+....+.+.++......+..+......+. +|.+.....+.++..+.-++..++..++..+++++ .....+.-
T Consensus 286 ~~~Lfl~~~iFW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFa 365 (498)
T COG3104 286 AIPLFLFAVIFWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFA 365 (498)
T ss_pred HHHHHHHHHHHHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHH
Confidence 01111111222222222333333333333333 33333333444555556666666777777774443 22222333
Q ss_pred HHHHHHHHHHHHHHHH---h------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccc
Q 010692 360 SAATFLGAISCLTAFC---L------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV 430 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~---~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~ 430 (503)
++..+.++..+++... . .+.++.+..+++..++--+..|...+++.+..|++..+..+++....... |+.
T Consensus 366 lGl~l~g~~fl~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~~t~laP~~~~s~~ma~wfLt~a~-~~~ 444 (498)
T COG3104 366 LGLILAGLGFLILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSMVTKLAPPALKSFIMAMWFLTVAA-GQT 444 (498)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHHHHHhChHHHHHHHHHHHHHHHHH-HHH
Confidence 4433334433333332 1 14566667777777777788888999999999999999999887544433 555
Q ss_pred cchhhHHH------HHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692 431 PSSPLVGV------LQDHVNNWRKTTLALTSIFFLAAGIW 464 (503)
Q Consensus 431 ~~~~~~g~------l~~~~g~~~~~~~~~~~~~~~~~~~~ 464 (503)
++..+.+. ..+... ....|..++...++.....
T Consensus 445 l~g~va~~~~~~~~~~~~~~-~~~~F~~~g~v~i~~~~~~ 483 (498)
T COG3104 445 LGGQVAGLTAVTDPAYTAFI-EGRVFGTIGVVAIVIGILL 483 (498)
T ss_pred hhceecccccccchhhhhhh-hhhhHHHHHHHHHHHHHHH
Confidence 55444441 222222 3345555555544444433
No 118
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.78 E-value=2.3e-15 Score=136.30 Aligned_cols=328 Identities=14% Similarity=0.065 Sum_probs=226.1
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC-----Cchh-HHHHHHHHHHHHHHhhhh-----h-------H-
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN-----PFRL-IGVGLSVWTFATAGCGSS-----F-------D- 125 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G-----rr~~-l~~~~~~~~~~~~~~~~~-----~-------~- 125 (503)
..|++++..-.+.+.+...+... ..+.+|+.+|+.+ ||.. +..|..+...+..+.+++ . +
T Consensus 7 IvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~~ 85 (403)
T PF03209_consen 7 IVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGPF 85 (403)
T ss_pred HHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHccccccccccc
Confidence 57899998888988888877665 6889999999998 7764 455666666655555443 2 1
Q ss_pred -HH--HHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHH---HHHHHH
Q 010692 126 -FW--SIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRY---AFWGEA 199 (503)
Q Consensus 126 -~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~---~f~~~~ 199 (503)
.+ ...+.-.+.|+|.+...+...++++|..|+|+|+++.++.....-+|.+++..+.+.+.+.+.-.- .+...+
T Consensus 86 ~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~~a 165 (403)
T PF03209_consen 86 WLGLALAALAFLLYGLGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQGVA 165 (403)
T ss_pred HHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHH
Confidence 22 234466778999999999999999999999999999999999999999999999998887665322 222222
Q ss_pred HHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHH
Q 010692 200 ILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDT 279 (503)
Q Consensus 200 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (503)
++.++..++..+-. |.......+.++ ++...+...+
T Consensus 166 ~i~~~l~~ia~wg~-E~r~~~~~~~~~-------------------------------------------~~~~~f~~a~ 201 (403)
T PF03209_consen 166 LIALLLNLIALWGQ-EPRRSRRAAAAE-------------------------------------------RPRPPFREAW 201 (403)
T ss_pred HHHHHHHHHHHHhc-ccCCcccccCCC-------------------------------------------CCCccHHHHH
Confidence 22222222222221 211110000000 0001223556
Q ss_pred HHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHH
Q 010692 280 KVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFK 357 (503)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~ 357 (503)
+++..+|+...+.+..++....++.-...+-.|--+.++++..+. .++.....+.++|-...+++..| .+++ +
T Consensus 202 ~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~-----~ 276 (403)
T PF03209_consen 202 RQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKK-----R 276 (403)
T ss_pred HHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----H
Confidence 777788888888777777777777777788889999999997555 66677788888888888887774 3333 3
Q ss_pred HHHHHHHHHHHHH---HHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchh
Q 010692 358 LLSAATFLGAISC---LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP 434 (503)
Q Consensus 358 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~ 434 (503)
....++..++..+ .......+.+.+....++.|++.+.........+.+...++..|..+|.-...+.. +..++..
T Consensus 277 ~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~-A~Glg~~ 355 (403)
T PF03209_consen 277 TAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAI-ARGLGTF 355 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHH-HHHHHHH
Confidence 3333333333322 22333356777888888888888877777788888888889999999998766666 7777888
Q ss_pred hHHHHHhhh
Q 010692 435 LVGVLQDHV 443 (503)
Q Consensus 435 ~~g~l~~~~ 443 (503)
++|.+.|..
T Consensus 356 ~GG~~~D~~ 364 (403)
T PF03209_consen 356 LGGALRDLV 364 (403)
T ss_pred HHHHHHHHH
Confidence 888887753
No 119
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=99.77 E-value=1.4e-17 Score=155.28 Aligned_cols=387 Identities=13% Similarity=0.130 Sum_probs=229.9
Q ss_pred ccccCCchhHHHHHHhhhcccCCCCCccccccccc-ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCC-chhHHHH
Q 010692 32 SLSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRG-DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FRLIGVG 109 (503)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~~l~~~ 109 (503)
.|..+.+..+..++...+.+...+..-++ +++ |.+.+.+..|++.++..++.+++++..|+...|.+. |+.++.|
T Consensus 32 ~wrsi~l~~~~sfl~~v~~sI~~~s~wpY---l~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s 108 (488)
T KOG2325|consen 32 NWRSIYLALLNSFLVAVQFSIYLTSMWPY---LQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVS 108 (488)
T ss_pred chHhHHHHHHHHHHHhhhheEEEeecchh---hhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHH
Confidence 44445555666777777544444433222 222 467788889999999999999999999999999986 8888999
Q ss_pred HHHHHHHHHHh-hhh---h-HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHh
Q 010692 110 LSVWTFATAGC-GSS---F-DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 184 (503)
Q Consensus 110 ~~~~~~~~~~~-~~~---~-~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 184 (503)
.++..+|.++. ++. + .-+.++++|++.|+|.| ......+|+++....++|.++++....+..+|.++||.++..
T Consensus 109 ~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~-n~a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~ 187 (488)
T KOG2325|consen 109 FLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGVG-NFAVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLA 187 (488)
T ss_pred HHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCcc-cHHHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHH
Confidence 99999999998 332 3 67889999999999987 556788999999888999999999999999999999998876
Q ss_pred hcCc----------c---hhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692 185 VGSH----------L---NWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 251 (503)
Q Consensus 185 l~~~----------~---gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (503)
+... . -+..+-|+.+++.++..+...++..|..++..+.+.++.
T Consensus 188 f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~~~~~~~~~~~----------------------- 244 (488)
T KOG2325|consen 188 FTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYRGIIDKKKRSV----------------------- 244 (488)
T ss_pred HhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeecccCccccccccc-----------------------
Confidence 6521 1 134677888888888888888887664433211111110
Q ss_pred chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHH-Hh
Q 010692 252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFG-GV 329 (503)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~ 329 (503)
++++.+++..+. .-+..+..+.+.+..+...+......+..+.+....++.+.... ... ..
T Consensus 245 ~~~~~~~~~~~~-----------------~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~~~gi~ 307 (488)
T KOG2325|consen 245 EEEKSDIEKVKK-----------------PKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVLYNGIT 307 (488)
T ss_pred hhhccchhhhcc-----------------CChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHHhhhhH
Confidence 000000000000 00111222333344455555555555666666666666664332 211 22
Q ss_pred hhhhhhhch-hhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh---h---------------------------h
Q 010692 330 TIVCGIVGT-ISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---S---------------------------S 378 (503)
Q Consensus 330 ~~~~~~~~~-~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------------------------~ 378 (503)
..+.+++.. +...+..-|+++...+. .++.++........+..... . +
T Consensus 308 ~~~~g~ls~~~~l~~~f~~l~~i~~r~-~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~~~v~ 386 (488)
T KOG2325|consen 308 LSISGILSVILLLLYIFTRLGKIDKRR-IILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTTTAVP 386 (488)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhccce-eeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccCcccC
Confidence 222222221 22222223333211000 22222222222221111100 0 0
Q ss_pred HHHHHH-HHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692 379 LYGFLA-LFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 457 (503)
Q Consensus 379 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 457 (503)
.+..+. ...+.|...-.......++.++...|+.+++..|+....... +..++|.+.-.+....| +++.+.+.....
T Consensus 387 ~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~-~~~~~~~~~t~~~~~~g-~~~v~~~~~~~~ 464 (488)
T KOG2325|consen 387 LILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSI-ARVVGPIFSTAIFTLSG-PRPVWIILLCLL 464 (488)
T ss_pred hhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccch-hhhhhHHHHhhhHHhcC-ccHHHHHHHHHH
Confidence 111111 112222222233445778888999999999999999766666 88888888877777776 666666655555
Q ss_pred HHHHHHHH
Q 010692 458 FLAAGIWF 465 (503)
Q Consensus 458 ~~~~~~~~ 465 (503)
++...++.
T Consensus 465 l~~~~l~~ 472 (488)
T KOG2325|consen 465 LVVAALWI 472 (488)
T ss_pred HHHHHHHH
Confidence 55554443
No 120
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=99.73 E-value=3.3e-15 Score=141.87 Aligned_cols=318 Identities=13% Similarity=0.084 Sum_probs=218.3
Q ss_pred HHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh--hhhhhhchhhhhhccCCCCCc
Q 010692 83 MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG--EASFISLAAPFIDDNAPVPQK 160 (503)
Q Consensus 83 ~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g--~~~~~~~~~~~i~~~~~~~~r 160 (503)
.+...+.++..|.++||+|||..+....+...+..+...+.. +|.++ +.|+. .+.......++++|....++|
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~~~~R 146 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISSEEER 146 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccchhHH
Confidence 677888999999999999999999999999888887777766 44333 44443 334677888999999999999
Q ss_pred hhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCccc
Q 010692 161 TAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEA 240 (503)
Q Consensus 161 ~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (503)
...+++.......+..++|.+++.+.+..|.-.+|++..+..++..+...+.+||+.....+++..... .
T Consensus 147 ~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~--------~-- 216 (463)
T KOG2816|consen 147 SSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRE--------L-- 216 (463)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccc--------c--
Confidence 999999999999999999999999999899999999999999999988888889876553332100000 0
Q ss_pred CCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHH-HHhhhhhccccchhhhhccc
Q 010692 241 SNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYN-FVIGAYSYWGPKAGYNIYHM 319 (503)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 319 (503)
.. ..... ....+..+..+..-.+|..+.+++..+... .......-..+.|+...+++
T Consensus 217 -~~----~~~~~-----------------~~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w 274 (463)
T KOG2816|consen 217 -TP----GSLDS-----------------SHVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGW 274 (463)
T ss_pred -CC----Ccccc-----------------hhhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCc
Confidence 00 00000 000000111112223344444444333333 33333332557888888999
Q ss_pred chhhH-HHHHhhhhhhhhchhhhh-hhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcc
Q 010692 320 SNADM-MFGGVTIVCGIVGTISGG-FILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQ 397 (503)
Q Consensus 320 ~~~~~-~~~~~~~~~~~~~~~~~g-~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (503)
++... .+.+.......++.++.. .+...++.+ +.+..+...-........+..+.|.......+. .......
T Consensus 275 ~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~-----~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~-~~~~~~~ 348 (463)
T KOG2816|consen 275 NKKEFSDLLSLVSILGIISQLLLLPLLSSILGEK-----RLISLGLLSEFLQLLLFAFATETWMMFAAGVVV-ALAGIVF 348 (463)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-----hHhhHHHHHHHHHHHHHHHhccchhhhHHHHHH-Hhhcchh
Confidence 97665 355566666777776666 666677777 655555555555555555555555544444333 3445667
Q ss_pred chhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 398 APVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+...+.....+.++++|++.++......+ ..+++|.+.+.+...+-
T Consensus 349 pa~~s~~s~~v~~~e~g~v~~~is~i~~l-~~~~~~~~~~~i~~~t~ 394 (463)
T KOG2816|consen 349 PAIRAFASILVSPEEQGKVFGIISGIEGL-SGVVSPALYGNIFALTL 394 (463)
T ss_pred HHHHhHHHhhcccccccchhhHHHHHHHH-hhhhhHHHHHHHHHHHH
Confidence 77888888889999999999999877777 77889999988876553
No 121
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.70 E-value=1.7e-16 Score=128.56 Aligned_cols=139 Identities=29% Similarity=0.390 Sum_probs=127.1
Q ss_pred hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCC
Q 010692 77 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 156 (503)
Q Consensus 77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 156 (503)
++.+.+.++..+++++.|++.||+|||+.+..+..+..++.+...++++++.+++.+++.|++.+...+....++.|.+|
T Consensus 2 ~~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 81 (141)
T TIGR00880 2 LLLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP 81 (141)
T ss_pred EEEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC
Confidence 34566788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692 157 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 215 (503)
Q Consensus 157 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 215 (503)
+++|++..++.+....+|..+++.+++.+.+..+|++.|++.+++.++..+..++..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 99999999999999999999999999999998899999999988887777777666554
No 122
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.66 E-value=6.7e-15 Score=141.08 Aligned_cols=344 Identities=14% Similarity=0.083 Sum_probs=210.4
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc---C--CchhHHHHHHHHHHHHHHhhhh----hHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH---N--PFRLIGVGLSVWTFATAGCGSS----FDFWSIAIC 132 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~---G--rr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~ 132 (503)
+-+++++|+++++.....+...+...+ -++.|.++|.+ | ||+-++++.++.+++.+..+.. .+.....+.
T Consensus 14 ~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 92 (433)
T PF03092_consen 14 PFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAVVL 92 (433)
T ss_pred HHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHHHH
Confidence 344799999999999988888887765 55789999976 3 5556777777776666655543 346666677
Q ss_pred HHHHHhhhhhhhhchhhhhhccCC--CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692 133 RMLVGVGEASFISLAAPFIDDNAP--VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~~--~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
-++..+|.......+-+++.|... ++.||...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+..+
T Consensus 93 l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~~~ 172 (433)
T PF03092_consen 93 LFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIVAL 172 (433)
T ss_pred HHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHHHH
Confidence 788889999999999999999874 334788888999999999999999999999999999999999888777777666
Q ss_pred hccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692 211 VIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 290 (503)
Q Consensus 211 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (503)
++.+|.... +.++..... ++.. .......++....+++.++.+.+|.
T Consensus 173 ~~~~e~~~~--~~~~~~~~~------------------~~~~-------------~~~~~~~~~~~~~l~~~~~~~~i~~ 219 (433)
T PF03092_consen 173 FLLEERKVR--PADEVFSFG------------------KEEV-------------PCLFGSFREQLSELWRALQQRAIWQ 219 (433)
T ss_pred Hhhhhcccc--ccchhhccc------------------cccc-------------chhhHHHHHHHHHHHHHHhhhHHHH
Confidence 666551111 110000000 0000 0000112333456777788888887
Q ss_pred HHH-HHHHHHHHhhhhhccccchhhhhcc---cchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHH
Q 010692 291 NVL-GYIAYNFVIGAYSYWGPKAGYNIYH---MSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 366 (503)
Q Consensus 291 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (503)
..+ ..++............-.+..+..+ +++.-. ..+. +.+.++.+++..+-+++.++...+ +++....++.
T Consensus 220 ~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp~fs~~f~--~~~~-~vg~~~~l~g~~~y~~~~~~~~~R-~~~~~t~~~~ 295 (433)
T PF03092_consen 220 PILFFIFFFNLPPSISSASSFYFQTDALGGPHFSPSFY--GTLS-IVGSIASLLGILLYRKYFSNWSWR-RIFVVTTLVS 295 (433)
T ss_pred HHHHHHHHHHhccCCCCccEEEEEeccccccccCHHHH--HHHH-HHHHHHHHHHHHHHHHHHhCCCHH-HHHHHHHHHH
Confidence 666 3332222221111101111122223 343222 2222 233333444444444443332221 4444444333
Q ss_pred HHHHHHHHH----------hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhH
Q 010692 367 AISCLTAFC----------LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV 436 (503)
Q Consensus 367 ~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~ 436 (503)
+...+.-.. .++.+..+.--.+........+.|...++++..|+..-|+..++...+.|+ |..++..++
T Consensus 296 ~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nl-g~~~s~~lg 374 (433)
T PF03092_consen 296 VLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVIGMIAFMPSLVLAARLCPKGSEGTVYALLASFSNL-GSSVSSTLG 374 (433)
T ss_pred HHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHH-HHHHHHHHH
Confidence 322221110 112222333334455555566778888899999999999999999988888 888888788
Q ss_pred HHHHhhhh
Q 010692 437 GVLQDHVN 444 (503)
Q Consensus 437 g~l~~~~g 444 (503)
..+.+..+
T Consensus 375 ~~l~~~~~ 382 (433)
T PF03092_consen 375 AFLMELFG 382 (433)
T ss_pred HHHHHHcC
Confidence 87777654
No 123
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.65 E-value=1.5e-15 Score=146.01 Aligned_cols=145 Identities=16% Similarity=0.215 Sum_probs=128.0
Q ss_pred ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh----HHHHHHHHHHHHHhhhhhhhhch
Q 010692 72 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF----DFWSIAICRMLVGVGEASFISLA 147 (503)
Q Consensus 72 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l~G~g~~~~~~~~ 147 (503)
.++.+...++..++..++.++.|+++||+|+|+++..+.++.+++..+..... +++.+++.+++.|++.+...+..
T Consensus 250 ~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~ 329 (418)
T TIGR00889 250 VKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG 329 (418)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 35679999999999999999999999999999999999999988877666532 35677889999999999888888
Q ss_pred hhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCc------chhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 148 APFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSH------LNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 148 ~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~------~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
..++.|++|+++|++++++.+ ...++|.++||+++|.+.++ +||+..|++.+++.++..++.+++.||+
T Consensus 330 ~~~i~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 330 SVFVEKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999997 67889999999999999876 4699999999999888888888888764
No 124
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.63 E-value=5.2e-13 Score=122.79 Aligned_cols=369 Identities=10% Similarity=-0.002 Sum_probs=238.2
Q ss_pred chhHHHHHHhhhcccCCCCCcccccccccc-cCCCccchh-hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH
Q 010692 38 PPLAEAEMATRSLSEDSPPTPSWFTPKRGD-FKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF 115 (503)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 115 (503)
++|...|+.. ..|.-|.+.|-+.+. .|+|..|+. -+.-...-.+....++...+.|..|.|++++++.+...+
T Consensus 9 llc~~gf~~~-----frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~ 83 (412)
T PF01770_consen 9 LLCLFGFFKE-----FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYII 83 (412)
T ss_pred HHHHHHHHHh-----cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 4455555553 345555554444554 899988875 567788888889999999999999999999999999999
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC--cchhHH
Q 010692 116 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRY 193 (503)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~--~~gwr~ 193 (503)
...+.-+.++...+-+..+.-|++.+. ..+..+++-...|+++-.++.+...++.-+|..++.++|-.+.. ..+++.
T Consensus 84 t~~lll~~~sv~~mq~~q~~yg~~~a~-evay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~ 162 (412)
T PF01770_consen 84 TWLLLLFGTSVLAMQLMQFFYGLATAA-EVAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQ 162 (412)
T ss_pred HHHHHHHHCcHHHHHHHHHHHHHHHHH-HHHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHH
Confidence 999999999999999999999999984 66788999888899989999999999999999999999987764 345666
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCC--CCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhh
Q 010692 194 AFWGEAILMLPFAVLAFVIKPLQLKG--FAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQ 271 (503)
Q Consensus 194 ~f~~~~~~~~~~~~~~~~~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (503)
.+++......+..++.++ +|...+. .++....+.. ..+.+....++..++. .+.++.++.........
T Consensus 163 L~~isl~~~~~a~~~~~f-LP~~~~S~~f~r~~~~~~~-----~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 232 (412)
T PF01770_consen 163 LNYISLASVSLALLIALF-LPMPKRSLFFHRKPPAEQD-----ANESESDKMNESPESS----SSTEKSPSTESSSRKSV 232 (412)
T ss_pred HHHHHHHHHHHHHHHHHH-cCCCCcccceeccCccccc-----cccccccccccccccc----cccccCcccccchHHHH
Confidence 766665544444444444 4432211 1111000000 0000000000000000 01111111112222245
Q ss_pred hhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccc---hhhHHHHHhhhhhhhhchhhhhhhhhcc
Q 010692 272 LSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMS---NADMMFGGVTIVCGIVGTISGGFILDQM 348 (503)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~l~d~~ 348 (503)
.+..++++++..++|.++...+.+.+...++..+.+|......+....+ .-....-+...+.+.++.+..|++..+.
T Consensus 233 l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~qv~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w 312 (412)
T PF01770_consen 233 LRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQVINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNW 312 (412)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcch
Confidence 5667788899999999999888888887777777777666555541111 1112333445556666777788874444
Q ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692 349 GATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 425 (503)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 425 (503)
.+.. ...+....++.++.++++...++.|...+...+.........+....-++.....+.-|...|+.+...-
T Consensus 313 ~~~~---~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~~yIif~~~y~fliTiA~~qIA~~l~~e~yaLVFGiNtf~Al 386 (412)
T PF01770_consen 313 DRWG---ELALGVFSLLQAGLLFLMSFTGNIWVCYAGYIIFRSLYMFLITIASFQIAKNLSEERYALVFGINTFVAL 386 (412)
T ss_pred HHHH---HHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccceeeeeeeHHHHHH
Confidence 4321 0233344444555555666667888887777777777767666677777777777777777777654443
No 125
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.61 E-value=3.7e-15 Score=144.24 Aligned_cols=148 Identities=10% Similarity=0.043 Sum_probs=131.0
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692 66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 145 (503)
Q Consensus 66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~ 145 (503)
++.+.+..+.|++.++..++..++.+++|++.||+|+|+.+..+.++.+++.++.++++|.+.+++.+++.|++.+...+
T Consensus 255 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~ 334 (420)
T PRK09528 255 ATPEQGTRVFGYLNSFQVFLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV 334 (420)
T ss_pred hccCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 33466667889999999999999999999999999999999999999999999999999999999999999999988888
Q ss_pred chhhhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 146 LAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 146 ~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
....++.|.+|++.|+...+. ++....+|.++++.+.|++.+.+|||..|++.+++.++..++.++..
T Consensus 335 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~ 403 (420)
T PRK09528 335 GVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTL 403 (420)
T ss_pred HHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHh
Confidence 888999999999999887665 67788899999999999999999999999999888777766666554
No 126
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.58 E-value=3e-13 Score=120.84 Aligned_cols=238 Identities=12% Similarity=0.083 Sum_probs=157.1
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
..+-+++|.++.|++.+.........+..++.|.++||+|||+..++-+++.+++++ +-..++++.++++|++.|++.+
T Consensus 58 Y~LY~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTS 136 (354)
T PF05631_consen 58 YALYESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATS 136 (354)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHH
Confidence 455578999999999999999999999999999999999999999999999998885 4556899999999999999999
Q ss_pred hhhhchhhh-hhccCCCC----CchhHHHHHH-hHHhHHHHHHHHHHHhhcCcchh--HHHHHHHHHHHHHHHHHHHhcc
Q 010692 142 SFISLAAPF-IDDNAPVP----QKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNW--RYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 142 ~~~~~~~~~-i~~~~~~~----~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gw--r~~f~~~~~~~~~~~~~~~~~~ 213 (503)
....+--++ +.|+-..+ ..+..++... ...++-.+++.+++.++.+..+. ..+|....++.++..+++...-
T Consensus 137 LLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W 216 (354)
T PF05631_consen 137 LLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTW 216 (354)
T ss_pred HHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcc
Confidence 888877776 45553222 2222233222 22333345555566666655443 7788887777666666554443
Q ss_pred ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692 214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 293 (503)
Q Consensus 214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (503)
+|...+ +.+.. +..+...+.++.+.++|+++.+.+
T Consensus 217 ~ENyg~---~~~~~------------------------------------------~~~~~~~~a~~~i~~d~ril~LG~ 251 (354)
T PF05631_consen 217 PENYGD---TSSSS------------------------------------------SLSGSFREAWRAILSDPRILLLGL 251 (354)
T ss_pred cccCCC---ccccc------------------------------------------chHHHHHHHHHHHHcCchhHHHHH
Confidence 442111 11000 000111244667778899988888
Q ss_pred HHHHHHHHhhhh-hccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhc
Q 010692 294 GYIAYNFVIGAY-SYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQ 347 (503)
Q Consensus 294 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~ 347 (503)
...++-...+.+ ..|.|..-.+..+. | -..+.+.+.++.++|+.+..++..+
T Consensus 252 ~qslFE~smy~FVflWtPaL~~~~~~~-P-~GlIFssFM~a~MlGS~lf~~l~s~ 304 (354)
T PF05631_consen 252 IQSLFEGSMYLFVFLWTPALDPDDEEL-P-LGLIFSSFMVAMMLGSSLFSRLLSK 304 (354)
T ss_pred HHHHHHHHHHHheeeeeceecCCCCCC-C-chHHHHHHHHHHHHHHHHHHHHHhC
Confidence 777776665555 45788766332222 2 2233455667777777777655543
No 127
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.57 E-value=1.9e-14 Score=141.73 Aligned_cols=154 Identities=10% Similarity=0.026 Sum_probs=117.7
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH---hhhhhHHHHHHHHHHHHHhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG---CGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
++++|.+..+.++..+...++..++.++.|+++||+|||+++..+.++..++.+. ...+++...+++++++.|++.+
T Consensus 278 ~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 357 (490)
T PRK10642 278 SHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVILN 357 (490)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHH
Confidence 4667888888888888899999999999999999999999988887654443332 2233567778889999998877
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
........++.|.+|++.|++++++......++..++|.+.+++.+.. +|+.+++...+++++..+..+ +.||++++
T Consensus 358 ~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~-~~pes~~~ 435 (490)
T PRK10642 358 CFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGV-TMKETANR 435 (490)
T ss_pred HHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHH-HhccccCC
Confidence 777777888999999999999999755545566678888888887654 478777776666655555444 45887654
No 128
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.54 E-value=5.8e-14 Score=134.52 Aligned_cols=147 Identities=14% Similarity=0.097 Sum_probs=124.9
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
++++|.++.+.+++.+...++..++.++.|+++||+|||+.+..+.....+.......+++.+.+++.+++.+++.+...
T Consensus 244 ~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~ 323 (393)
T PRK15011 244 INELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKRLGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILG 323 (393)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999888888888999999999999999998888777666665555667888888889999998888777
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
+....+..|.+|+ +|++++++++...++|..+|+.+++.+.+++||+..|++.+++.++..++.++.
T Consensus 324 ~~~~~~~~~~~p~-~~g~~~~~~~~~~~lg~~~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~ 390 (393)
T PRK15011 324 GIGMLYFQDLMPG-QAGSATTLYTNTSRVGWIIAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRI 390 (393)
T ss_pred HHHHHHHHHhCCC-CcchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhh
Confidence 7777888999886 499999999999999999999999999998999999998887776655555443
No 129
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.53 E-value=3.6e-14 Score=135.58 Aligned_cols=144 Identities=13% Similarity=0.037 Sum_probs=126.3
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHH--HHHHHHHHHHHhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVG 139 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~g 139 (503)
+++.++++.++.+.+++.+.+.++..++.++.|++.||+|||+.+.++..+.+++.++..+.++. ..+++..++.|++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 308 (377)
T TIGR00890 229 KPYGQSLGLSDGFLVLAVSISSIFNGGGRPFLGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFT 308 (377)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHH
Confidence 44457788888889999999999999999999999999999999999999998888887776643 3345677888888
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 205 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 205 (503)
.+...+....++.|.+|+++|+++.++.+....+|..++|.+.+.+.+..||++.|++.+++.++.
T Consensus 309 ~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~ 374 (377)
T TIGR00890 309 WGGTISLFPSLVSDIFGPANSAANYGFLYTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTS 374 (377)
T ss_pred hccchhccHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHh
Confidence 888888888899999999999999999999999999999999999999999999999988766554
No 130
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.53 E-value=1e-13 Score=139.51 Aligned_cols=140 Identities=9% Similarity=-0.040 Sum_probs=121.8
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccC
Q 010692 76 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 155 (503)
Q Consensus 76 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 155 (503)
.+...+..++..++.++.|+++||+|||++++++.++.+++.++.+++++.+.+++.+++.|++.+..++...++++|++
T Consensus 598 ~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~~~~~a~~aEl~ 677 (742)
T TIGR01299 598 YFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAWNALDVLTVELY 677 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 44566778999999999999999999999999999999999999999998888888999999988888999999999999
Q ss_pred CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 156 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 156 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
|.++|++++|+.++...+|.++||++++.+.+. +...+|++.+++.++.+++.++ +||+.
T Consensus 678 Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~-LPET~ 737 (742)
T TIGR01299 678 PSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALK-LPDTR 737 (742)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHh-CCCCc
Confidence 999999999999999999999999999988754 4567888888777666655554 47643
No 131
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.52 E-value=1.5e-13 Score=132.29 Aligned_cols=146 Identities=16% Similarity=0.139 Sum_probs=128.0
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692 66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 145 (503)
Q Consensus 66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~ 145 (503)
++.|. .+.++..+.+.++..++.++.|++.||+|+|+.+..+..+.+++.++..+.++.+.+++.+++.|++.+...+
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~ 321 (399)
T PRK05122 244 AARGW--DGAALALTLFGVAFVGARLLFGNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFP 321 (399)
T ss_pred HHccc--ccchHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHH
Confidence 44454 3457777888999999999999999999999999999999998888888888988888999999999998888
Q ss_pred chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
.....+.|.+|+++|+++.++++....+|..+++.+.+.+.+..||++.|++.+++.++..++.++..
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (399)
T PRK05122 322 ALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLY 389 (399)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888889999999999999999999999999999999999888999999999888777666655554
No 132
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.51 E-value=1.2e-13 Score=133.75 Aligned_cols=154 Identities=18% Similarity=0.105 Sum_probs=136.9
Q ss_pred cccccc-cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 62 TPKRGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 62 ~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
|.+.++ +|.+..+.|++.+.+.++..++.++.+++.||.++++.+..+.++.+++.++..+.++.+.+.++.++.|++.
T Consensus 247 p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 326 (417)
T PRK10489 247 PALADEVWQMGAAQIGLLYAAVPLGAALGALTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLS 326 (417)
T ss_pred HHHHHhccCCChhHhHHHHHHHHHHHHHHHHHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHH
Confidence 434455 8999999999999999999999999999999988888888888888888888888898888888999999998
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 215 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 215 (503)
+...+...+++.|..|+++||++++++.....+|..+|+.+.|.+.+.+|++..+++.++..++..++.....|+
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 401 (417)
T PRK10489 327 AISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVLGE 401 (417)
T ss_pred HHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhccc
Confidence 887788889999999999999999999999999999999999999999999999998888877777777766655
No 133
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.50 E-value=8.4e-14 Score=134.57 Aligned_cols=139 Identities=17% Similarity=0.190 Sum_probs=125.5
Q ss_pred hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhcc
Q 010692 75 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 154 (503)
Q Consensus 75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 154 (503)
.+.+.+++.++..++.+..|++.||+|||+.+..+..+..++.+...+.++.+.+++.+++.|++.+...+...+++.+.
T Consensus 260 ~g~~~~~~~l~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 339 (408)
T PRK09874 260 SGMIASVPGVAALLSAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTLLVYN 339 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHHHHHh
Confidence 45666777888889999999999999999999999998888888888888899999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 155 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 155 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
.|+++||+.+++.+....+|..+||.+++.+.+..||++.|++.+++.++..+..++..
T Consensus 340 ~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 340 SSNQIAGRIFSYNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred CCcccceeeehHHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999998888777766554
No 134
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.50 E-value=2.4e-13 Score=129.82 Aligned_cols=145 Identities=11% Similarity=0.152 Sum_probs=126.2
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
.+++|.++.+.+++.+.......++.++.|++.||+|||+++.++.++..+..+...+.++.+.+++.+++.|++.+...
T Consensus 227 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 306 (375)
T TIGR00899 227 IHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRFGKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILA 306 (375)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57789999999998888888888899999999999999999988887777766666677888888889999999998888
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
+....++.|..|++ +++++++++....+|..++|.+++.+.+..||+..|++.+++.++..++..
T Consensus 307 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~ 371 (375)
T TIGR00899 307 GIGMLYFQDLMPGR-AGAATTLYTNTGRVGWIIAGSVGGILAERWSYHAVYWFAIVMLIVALFCLL 371 (375)
T ss_pred HHHHHHHHHhCcch-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHh
Confidence 88888999998764 679999999999999999999999999988999999999887766665543
No 135
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.50 E-value=1.4e-13 Score=136.48 Aligned_cols=146 Identities=12% Similarity=0.060 Sum_probs=116.0
Q ss_pred cccc-cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--hHHHHHHHHHHHHHh
Q 010692 62 TPKR-GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--FDFWSIAICRMLVGV 138 (503)
Q Consensus 62 ~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~ 138 (503)
|.+. +++|.+..+.+++.+.+.++..++.++.|+++||+|||+++..+.++.+++.++.... .+.+.+.+..++.+.
T Consensus 299 p~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (496)
T PRK03893 299 PTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVFAIGGANVWVLGLLLFFQQM 378 (496)
T ss_pred HHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHhhccccHHHHHHHHHHHHHH
Confidence 4444 6899999999999999999999999999999999999999888877776665544332 344455555555554
Q ss_pred hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHH
Q 010692 139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAV 207 (503)
Q Consensus 139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~ 207 (503)
......+....++.|.+|+++|++++++.+....+|..+||.+++.+.+.+||+..+...+....+..+
T Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~~~~~~~~~~~~ 447 (496)
T PRK03893 379 LGQGISGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALASLSFSLTFVVI 447 (496)
T ss_pred HhcccchhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHH
Confidence 443445667788999999999999999999999999999999999999999999888766654444333
No 136
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.49 E-value=2.8e-13 Score=129.26 Aligned_cols=145 Identities=14% Similarity=0.034 Sum_probs=131.3
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
+...+|+|.++.+.|++.+...++..++.++.+++.||+|+|+.+.++.++.++..++.++++|.+.+++.+++.|++.+
T Consensus 229 ~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~ 308 (382)
T TIGR00902 229 AIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFA 308 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Confidence 44456799999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 208 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 208 (503)
...+....++.+. |+++|++..++++ ...++|..+|+.++|.+.+++|+ ..|++.++++++..++
T Consensus 309 ~~~~~~~~~i~~~-~~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 309 VCHLAAMRYIAAQ-PGSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHhC-CHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999998 9989999999986 57889999999999999999996 6788888777655443
No 137
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.47 E-value=2.3e-13 Score=131.32 Aligned_cols=151 Identities=14% Similarity=0.050 Sum_probs=127.6
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|.+.++.|.+..+.+.+.+.+.++..++.++.|++.||+|||+.+..+.+..+++.++..+.++.+.+.+..++.|++.+
T Consensus 244 p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 323 (406)
T PRK11551 244 PSLLVGQGLSRSQAGLVQIAFNIGGALGSLLIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVV 323 (406)
T ss_pred HHHHHhCCCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 45567789999999999999999999999999999999999999888877777777777777888888888888999888
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhc
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
...+...+++.|.+|+++|++.+++.+....+|..+||.+++.+.++. +|...+++.....++..++.++.
T Consensus 324 ~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 324 GGQSVLYALAPLFYPTQVRGTGVGAAVAVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred hHHHHHHHHHHHHcchhhhhhhhhHHHHhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 788888999999999999999999999999999999999999998764 46666666665555555444443
No 138
>PRK12382 putative transporter; Provisional
Probab=99.47 E-value=5.5e-13 Score=127.97 Aligned_cols=145 Identities=12% Similarity=0.101 Sum_probs=128.3
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692 66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFIS 145 (503)
Q Consensus 66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~ 145 (503)
++.+.+ +.++..+.+.++..+++++.|++.||+|+|+.+..+..+.+++.++..+.++.+.++++.++.|++.+...+
T Consensus 244 ~~~~~~--~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~ 321 (392)
T PRK12382 244 ASKGWA--MAGFTLTAFGGAFVLMRVLFGWMPDRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFP 321 (392)
T ss_pred HhcCCc--hhHHHHHHHHHHHHHHHHHHHHHHHhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHH
Confidence 445544 356677788888899999999999999999999999999999988888888888888899999999998888
Q ss_pred chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
...+.+.|.+|+++|++++++++....+|..+||.+.+.+.++.||+..|.+.+++.++..++.++.
T Consensus 322 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 388 (392)
T PRK12382 322 ALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILS 388 (392)
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhh
Confidence 8888899999999999999999999999999999999999999999999999998887777666544
No 139
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.46 E-value=3.3e-13 Score=127.58 Aligned_cols=150 Identities=19% Similarity=0.171 Sum_probs=138.2
Q ss_pred cccccc-cCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhh
Q 010692 62 TPKRGD-FKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVG 139 (503)
Q Consensus 62 ~~i~~~-~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 139 (503)
+.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+.....++.+.+++..++.|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~ 278 (352)
T cd06174 199 PLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFG 278 (352)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 333344 4889999999999999999999999999999999999 99999999999999999999999999999999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
.+...+....++.|..|+++|++.+++.+....+|..+++.+.+.+.+..+|+..+++.+++.++..+..++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 279 LGFAFPALLTLASELAPPEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HhccchhHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 999999999999999999999999999999999999999999999998889999999999888777665543
No 140
>PRK03545 putative arabinose transporter; Provisional
Probab=99.45 E-value=1e-12 Score=126.00 Aligned_cols=147 Identities=16% Similarity=0.163 Sum_probs=122.9
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-GCGSSFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~g~~~~ 143 (503)
.+++|.+..+.+++.+.+.++..+++++.|++.||+|||+.. .+..+..++.. +....++.+.++++.++.|++.+..
T Consensus 233 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~ 311 (390)
T PRK03545 233 QQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHPSGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCI 311 (390)
T ss_pred HHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccchhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcc
Confidence 556889999999999999999999999999999999988754 44444444433 3455678888888999999988777
Q ss_pred hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
.+.....+.+..| ++|++++++++....+|..+||+++|.+.+++|++..|++.+++.++..+..+...
T Consensus 312 ~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 380 (390)
T PRK03545 312 GLAMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGNQVSLHLGLSSIGYVGAALALAALVWSILIF 380 (390)
T ss_pred hHHHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHc
Confidence 7777788888876 57999999999999999999999999999999999999999988877777766655
No 141
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.44 E-value=8.2e-13 Score=128.63 Aligned_cols=147 Identities=21% Similarity=0.239 Sum_probs=135.1
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
++++|.++...|++.+++.+|..+++++.+++.+|+++++.+..+.++++++.+..+++++.+..++.-++.|++.....
T Consensus 246 ~~~l~~~a~~yGll~a~~gvGai~Gal~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~ 325 (524)
T PF05977_consen 246 RDVLGGGASGYGLLLAAFGVGAILGALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIAN 325 (524)
T ss_pred HHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999999888
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
+...+.+.+..|++.|||.++++++....+..+|..+.|.+.+.+|.+..+.+.++..++..++...
T Consensus 326 ~~~~t~~Q~~~P~~~~GRv~si~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~ 392 (524)
T PF05977_consen 326 SSLNTLVQLSVPDWVRGRVFSIYQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALR 392 (524)
T ss_pred HHHHHHHHHhCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999999999999999999999999998887765555554443
No 142
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.43 E-value=1.9e-13 Score=133.11 Aligned_cols=146 Identities=15% Similarity=0.186 Sum_probs=123.2
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc--CCchhHH--HHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLIG--VGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l~--~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
+++.+++|.+..+.+++.++..++..+++++.|+++||. ++|+... .+.++.+++.++..+.++++.+++.+++.|
T Consensus 265 ~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G 344 (455)
T TIGR00892 265 VPYAKDKGVDEYEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFG 344 (455)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 555677899999999999999999999999999999984 3343333 334444555666677889999999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHH
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAV 207 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~ 207 (503)
++.+...+...+++.|.+|++++++.+++++....+|.++||.+++.+.+.. +|++.|++.+++.++..+
T Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~ 415 (455)
T TIGR00892 345 LSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGL 415 (455)
T ss_pred HHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHH
Confidence 9999899999999999999999999999999999999999999999999877 599999999887665544
No 143
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=99.42 E-value=4.6e-12 Score=117.55 Aligned_cols=188 Identities=10% Similarity=0.011 Sum_probs=142.7
Q ss_pred chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccch
Q 010692 274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATIS 353 (503)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 353 (503)
..+.+..+++.+++...+.+...+.+.....+.+++--++++..+.+..-.........+.++.-++.+++.+|+|+-
T Consensus 359 ~v~a~~~~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv-- 436 (618)
T KOG3762|consen 359 SVLADVGKVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHV-- 436 (618)
T ss_pred HHHHHHHHHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhccc--
Confidence 344555566777777666665555666655566666557777554443222334555677788888999999999998
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692 354 NAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
+++.+++....+-++......++|..+.+=.+-+...+..+....+++....||+.+.++.|+.......+|-.+|.
T Consensus 437 ---~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~Gs 513 (618)
T KOG3762|consen 437 ---NVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGS 513 (618)
T ss_pred ---ceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhh
Confidence 77777777777777777778899999999999999999999999999999999999999999999888877999999
Q ss_pred hhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 010692 434 PLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 467 (503)
Q Consensus 434 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 467 (503)
+++|.+.+.+| -+..|..+++.+++..++....
T Consensus 514 lIGG~~v~~fg-~~ttf~~~giAcl~~l~~~~~i 546 (618)
T KOG3762|consen 514 LIGGFVVERFG-ARTTFRIFGIACLVTLALFISI 546 (618)
T ss_pred hhhhhhheeeh-hHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988 4567777666655555544443
No 144
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.42 E-value=2.1e-12 Score=123.28 Aligned_cols=146 Identities=10% Similarity=0.080 Sum_probs=122.0
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEA 141 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~ 141 (503)
|...++.|.+.++.+++.+.+.++..+++++.|++.||+|+|+++..+..+.+++.+... + ........++.|++..
T Consensus 224 p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~--~-~~~~~~~~~l~g~~~~ 300 (381)
T PRK03633 224 PLYLNHQGMSDASIGFWMALLVSAGILGQWPIGRLADRFGRLLVLRVQVFVVILGSIAML--S-QAAMAPALFILGAAGF 300 (381)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHcCcHHHHHHHHHHHHHHHHHHh--h-hHHHHHHHHHHHHHHH
Confidence 444566789998999999999999999999999999999999999888888877665443 2 2344457788888877
Q ss_pred hhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692 142 SFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 142 ~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
...|...+.+.|..|+++++...+.+....++|..+||.++|++.++.||++.|++.+.+.++..+..+
T Consensus 301 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 301 TLYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred hHHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 788999999999999888888888888899999999999999999999999999998887765554443
No 145
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.41 E-value=7.2e-13 Score=129.95 Aligned_cols=148 Identities=12% Similarity=0.011 Sum_probs=115.3
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH--hhhhhHHHHHHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG--CGSSFDFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~--~~~~~~~~~l~~~r~l~G~g~~~ 142 (503)
++++|.+..+.++..+.+.++..++.+++|+++||+|||+.+.....+..++..+ ....++.+.+.+.+++.|++...
T Consensus 286 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 365 (467)
T PRK09556 286 FQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASLFALGFLVFG 365 (467)
T ss_pred HHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHhh
Confidence 5779999999999999999999999999999999999998876655444443322 22345666777888888865433
Q ss_pred hhhchhhhhhccCCCCCchhHHHHHHhHHhH-HHHHHHHHHHhhcC------------cchhHHHHHHHHHHHHHHHHHH
Q 010692 143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGS------------HLNWRYAFWGEAILMLPFAVLA 209 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~------------~~gwr~~f~~~~~~~~~~~~~~ 209 (503)
..........|.+|+++||.+.|+.+....+ |..++|.+.|.+.+ ..||+..|++..+..++..+..
T Consensus 366 ~~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 445 (467)
T PRK09556 366 PQLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAALDIAAIGCICLM 445 (467)
T ss_pred HHHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHHHHHHHHHHHHHH
Confidence 3333346677999999999999999988886 77999999999988 5789999999877766665554
Q ss_pred Hhc
Q 010692 210 FVI 212 (503)
Q Consensus 210 ~~~ 212 (503)
++.
T Consensus 446 ~~~ 448 (467)
T PRK09556 446 AIV 448 (467)
T ss_pred HHH
Confidence 433
No 146
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.41 E-value=4.7e-13 Score=128.69 Aligned_cols=139 Identities=9% Similarity=0.012 Sum_probs=113.7
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHH--HHhhh--hhHHHHHHHHHHHHHhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT--AGCGS--SFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~G~g~ 140 (503)
++++|.+..+.+.+.+...++..++.++.|+++||+|||+.+..+..+..+.. +...+ .++.+.+++..++.|++.
T Consensus 247 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 326 (394)
T TIGR00883 247 TQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIG 326 (394)
T ss_pred HHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHH
Confidence 47788999999999999999999999999999999999998775555444333 12222 246777778889999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHH
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILML 203 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~ 203 (503)
+...+...+++.|.+|+++|++++++ .+.+..+|..++|.+++.+.++.| |+..++...+..+
T Consensus 327 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 327 GMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 88999999999999999999999998 456677899999999999998888 8888777665443
No 147
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.41 E-value=5.5e-12 Score=114.13 Aligned_cols=173 Identities=17% Similarity=0.181 Sum_probs=143.0
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (503)
.+.+....+.+..+++.--.+..-.|.+.++ ++++..+. .+.+...+..-++.++.|.++||.+.| ..+..++
T Consensus 28 ~qif~~~fiGYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr-----~fm~~gL 101 (448)
T COG2271 28 IQIFLSIFIGYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPR-----YFMAFGL 101 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCc-----eeehHHH
Confidence 3455556666666667666677777766655 66887666 566888899999999999999999998 7888888
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhH--HHHHh
Q 010692 364 FLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLV--GVLQD 441 (503)
Q Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~--g~l~~ 441 (503)
+++++..+++.+.++.+.+.++..+.+.+.+..+|+....+.+-+++++||+..++-|++.|+ |+.+.|++. +++.+
T Consensus 102 ilsai~nil~Gfs~s~~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNi-GGal~~~~~~la~~~~ 180 (448)
T COG2271 102 ILSAIVNILFGFSPSLFLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNI-GGALAPLVALLAFFAF 180 (448)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhc-ccchHHHHHHHHHHHh
Confidence 888888888888888889999999999999999999999999999999999999999999999 777788888 88887
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 442 HVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 442 ~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
+. +|+.+|++-+++.++..++.+
T Consensus 181 ~~-~w~~~f~~pgiiaiival~~~ 203 (448)
T COG2271 181 HG-GWRAAFYFPGIIAIIVALILL 203 (448)
T ss_pred cc-chhHHHHHHHHHHHHHHHHHH
Confidence 75 499999998887766655544
No 148
>PRK03699 putative transporter; Provisional
Probab=99.40 E-value=1.2e-12 Score=125.48 Aligned_cols=147 Identities=14% Similarity=0.147 Sum_probs=125.8
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
++++|++..+.+++.+.+.++..++.++.|+++||+|||+.+.....+..+...+....++.+.+.+..++.|++.+...
T Consensus 233 ~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~ 312 (394)
T PRK03699 233 QKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVRFFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIY 312 (394)
T ss_pred HHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999999999988888777777777777787777778888999888888
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
+...++..|..|. ++++..+.......+|..++|.+.+.+.+..||+..+++.+++.++..+.+...
T Consensus 313 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~g~~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 379 (394)
T PRK03699 313 TTIITLGSQQTKV-ASPKLVNFILTCGTIGTMLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILL 379 (394)
T ss_pred HHHHHHHHHHccC-CCHHHHHHHHHhhhHHHHHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHH
Confidence 8878888887764 467888999999999999999999999999999999998888877766554444
No 149
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.40 E-value=1.9e-12 Score=123.98 Aligned_cols=154 Identities=12% Similarity=0.105 Sum_probs=123.3
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-HHHHHHHHHHHHHhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-DFWSIAICRMLVGVGE 140 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~g~ 140 (503)
|++.+++|.+..+.|...+.+.++..++.++.|++.||+|||+.+..+..+..++.++....+ +...+. -++.|++.
T Consensus 229 p~~l~~~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~--~~l~g~g~ 306 (393)
T PRK09705 229 PAFYIEIGASAQYSGSLLALMTLGQAAGALLMPAMARHQDRRKLLMLALVLQLVGFCGFIWLPLQLPVLW--AMVCGLGL 306 (393)
T ss_pred HHHHHHcCCChhhhhHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHccchHHHHH--HHHHHHhc
Confidence 444466899999999999999999999999999999999999999988888777766554322 222222 24568888
Q ss_pred hhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 141 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
+...+.......+..+ +++|++..++.+....++..++|.+.+++.+..| |+..|++.++.+++..+....+.||++
T Consensus 307 g~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (393)
T PRK09705 307 GGAFPLCLLLALDHSVQPAIAGKLVAFMQGIGFIIAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPARF 385 (393)
T ss_pred cchHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccccc
Confidence 7777777777777775 5689999999999999999999999999998776 888888888887777777677767644
No 150
>PRK10054 putative transporter; Provisional
Probab=99.39 E-value=8.5e-12 Score=119.42 Aligned_cols=169 Identities=9% Similarity=0.009 Sum_probs=124.8
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (503)
|.++.+.+..++...+......++|.|+++.+|.+.... ...+...++.+++.++.|+++||+|+| +.+..+.+
T Consensus 7 ~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k-----~~~~~~~~ 81 (395)
T PRK10054 7 RSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKK-----RYMLLAIT 81 (395)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcc-----hhHHHHHH
Confidence 456666677777778888888899999998889887655 444566778888999999999999998 66655555
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
...+..+.....++.+..+...++.+...+...+....+..+..|+++|+++.|+.+...++ |.+++|.+.+++.+ .+
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l-g~~igp~l~~~l~~-~g 159 (395)
T PRK10054 82 AFASGFIAIPLVNNVTLVVLFFALINCAYSVFSTVLKAWFADNLSSTSKTKIFSLNYTMLNI-GWTVGPPLGTLLVM-QS 159 (395)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH-hc
Confidence 55555555555566555555545555554555566777888889899999999999988888 98999999998875 34
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 010692 445 NWRKTTLALTSIFFLAAG 462 (503)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~ 462 (503)
|+..|...+++.++..+
T Consensus 160 -~~~~f~~~~~~~~i~~i 176 (395)
T PRK10054 160 -INLPFWLAAICSAFPLV 176 (395)
T ss_pred -cCcHHHHHHHHHHHHHH
Confidence 77788776666555433
No 151
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.38 E-value=3.8e-12 Score=125.91 Aligned_cols=156 Identities=7% Similarity=-0.097 Sum_probs=125.0
Q ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----h------HHHHH
Q 010692 61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----F------DFWSI 129 (503)
Q Consensus 61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~------~~~~l 129 (503)
.+.+.+++|.+..+.++......++..++.+++|+++||+|||+.+.++.++.+++.++.++. + +...+
T Consensus 307 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (481)
T TIGR00879 307 SPTIFENAGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVLGILGASFVTGSSKSSGNVAI 386 (481)
T ss_pred HHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhhcccCCcccchhHHHH
Confidence 355567889988888999999999999999999999999999999999988888877776621 1 33333
Q ss_pred HHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHH
Q 010692 130 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLA 209 (503)
Q Consensus 130 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~ 209 (503)
....++.+.......+....++.|.+|+++|++++++.+....+|.+++|.+.+.+.++.+|++.|++.++++++..++.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~~~~~~~~f~~~~~~~~~~~i~~ 466 (481)
T TIGR00879 387 VFILLFIAFFAMGWGPVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLESIGVGGVFIFFGGLNVLGLIFV 466 (481)
T ss_pred HHHHHHHHHHHccccCeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccceehhHHHHHHHHHHHH
Confidence 33333333333334566777889999999999999999999999999999999999888899999999998888888777
Q ss_pred Hhccccc
Q 010692 210 FVIKPLQ 216 (503)
Q Consensus 210 ~~~~p~~ 216 (503)
+++.||.
T Consensus 467 ~~~~~~~ 473 (481)
T TIGR00879 467 YFFLPET 473 (481)
T ss_pred heecccC
Confidence 7766653
No 152
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.38 E-value=5.8e-12 Score=121.15 Aligned_cols=149 Identities=15% Similarity=0.078 Sum_probs=118.5
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHH-HHHHHHHHHHHHhhh-----hhHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIG-VGLSVWTFATAGCGS-----SFDFWSIAICRML 135 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~-~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l 135 (503)
|.+.+++|.+..+.+++.+...++..++.++.|+++||+|||+.+. .+.+..+++.+...+ .++.+.+++..++
T Consensus 246 p~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 325 (402)
T TIGR00897 246 PMFVAELGFSTSEWLQIWGTFFFTNIVFNVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIA 325 (402)
T ss_pred HHHHHHcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHH
Confidence 4445778999999999999999999999999999999999988764 333334443333332 2466777788899
Q ss_pred HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
.|++.+...+ ....+.|..| ++|++++|+.+....+|..++|.+++.+.+..||+..|++.+++.++..++..+.
T Consensus 326 ~G~~~~~~~~-~~~~~~~~~~-~~~g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~ 400 (402)
T TIGR00897 326 LGIFLAGYVP-LAAVFPTLAP-KHKGAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFI 400 (402)
T ss_pred HHHHHHHHHH-HHHHHHhhCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 9988876655 4556677655 5799999999999999999999999999999999999999998887777666554
No 153
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.37 E-value=3.2e-12 Score=123.01 Aligned_cols=146 Identities=14% Similarity=-0.012 Sum_probs=112.4
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch--hH------HHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR--LI------GVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l------~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
.+++|.+..+.+++.+...++..++.++.|++.||+|||+ .. ..+.++..+........++.+..+....+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (399)
T TIGR00893 243 VQERGLSILEAGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALG 322 (399)
T ss_pred HHHhcccHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHH
Confidence 5668889999999999999999999999999999999996 11 111111222222222233455555455555
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHh
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 211 (503)
+.+.+ ..+...+++.|.+|+++|++++++.+....+|..++|.+.+.+.+..| |+..|++.+++.++..+..++
T Consensus 323 ~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 397 (399)
T TIGR00893 323 FFGLG-AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYLL 397 (399)
T ss_pred Hhchh-hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHHH
Confidence 55555 788899999999999999999999999999999999999999999888 999999988877766665543
No 154
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.36 E-value=3.1e-11 Score=117.29 Aligned_cols=167 Identities=16% Similarity=0.188 Sum_probs=125.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (503)
+.++...+.+++.......+..+.|.+.++ ++.+..+. .+.+...++..++.++.|++.||+|+| +.+..+.+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r-----~~~~~~~~ 96 (434)
T PRK11663 23 HILITMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNAR-----YFMGIGLI 96 (434)
T ss_pred HHHHHHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCc-----hhHHHHHH
Confidence 334444444555555555667788888766 77776554 555777888899999999999999998 66666666
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+..+..++....++.+......++.+++.+..++....++.+.+|+++|++++|+.+...++ |.+++|.+.+++.+..|
T Consensus 97 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g 175 (434)
T PRK11663 97 ATGIINILFGFSSSLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTERGGWWAIWNTAHNV-GGALIPLVVGAIALHYG 175 (434)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc
Confidence 66666655555566666666666667777777788888889999889999999999888877 88999999999998876
Q ss_pred hHHHHHHHHHHHHHHH
Q 010692 445 NWRKTTLALTSIFFLA 460 (503)
Q Consensus 445 ~~~~~~~~~~~~~~~~ 460 (503)
|+..|.+.+++.++.
T Consensus 176 -w~~~f~~~~i~~~~~ 190 (434)
T PRK11663 176 -WRYGMMIAGIIAIVV 190 (434)
T ss_pred -HHHHHHHHHHHHHHH
Confidence 888888776654443
No 155
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.36 E-value=9.4e-12 Score=118.86 Aligned_cols=141 Identities=16% Similarity=0.094 Sum_probs=122.3
Q ss_pred cccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692 64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~ 143 (503)
..+|.|.+..+.|.+.+...++..+..++.|++.||+|+|+.+..+.++.+++.++.+.+++.+.+++..++.|++.+..
T Consensus 231 ~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~ 310 (382)
T PRK11128 231 YWQAAGYSASTIGYLWSLGVVAEVLIFAFSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVC 310 (382)
T ss_pred HHHHCCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999998888888999999999999999999988
Q ss_pred hhchhhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHH
Q 010692 144 ISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFA 206 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~ 206 (503)
.+....++.+. +++++++..+..+ ....+|..+||.++|.+.+.+|+ ..|+..+++.++..
T Consensus 311 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 311 HLAAMRYIAAR-PGSEVIRLQALYSALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHC-CHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 88888888887 5566788888886 56678889999999999999888 56777766655443
No 156
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.35 E-value=5.3e-12 Score=121.27 Aligned_cols=143 Identities=8% Similarity=0.046 Sum_probs=124.5
Q ss_pred CCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchh
Q 010692 69 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 148 (503)
Q Consensus 69 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~ 148 (503)
+.+..+.|.+.+...+...++.+..|++.||+|+|+.+.++.++.+++..+.+.++|.+.+++.+++.|++.........
T Consensus 250 ~~~~~~~g~~~~~~~i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~ 329 (396)
T TIGR00882 250 QQGTRVFGYVTTMGELLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLVGCF 329 (396)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 45556788999999999999999999999999999999999999999888888889999999999999999877766777
Q ss_pred hhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692 149 PFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 149 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
.++.+..+++.++...+. .+....+|..+++.++|++.+..||+..|++.+++.++..+...+
T Consensus 330 ~~~~~~~~~~~~at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~ 393 (396)
T TIGR00882 330 KYITSQFDVRLSATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISVF 393 (396)
T ss_pred HHHHHhCCcceEEEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHHH
Confidence 788888888888877766 678899999999999999999899999999999888777766544
No 157
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.33 E-value=2e-11 Score=119.28 Aligned_cols=171 Identities=11% Similarity=-0.059 Sum_probs=128.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhh--cccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNI--YHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSA 361 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~ 361 (503)
+.++.+.+..++...++++...++|.|+++. .|.+.... .+.....++..++.+++|+++|| +||| +.+..
T Consensus 10 ~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~-----~~l~~ 84 (475)
T TIGR00924 10 KPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTK-----KTMVL 84 (475)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchH-----HHHHH
Confidence 4455556666677788888999999999886 77776544 55567778889999999999999 8998 67766
Q ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHH
Q 010692 362 ATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGV 438 (503)
Q Consensus 362 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~ 438 (503)
+.++..+..++....++.+.......+.+.+.+...+....+..+.+|++ .|+++.++.+...++ |.+++|.+.|+
T Consensus 85 ~~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~ni-G~~ig~~l~g~ 163 (475)
T TIGR00924 85 GGIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINI-GSFISPLLAGV 163 (475)
T ss_pred HHHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHH-HHHHHHHHHHH
Confidence 66666655555554445555555555666666667777888888888764 488899999988898 99999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692 439 LQDHVNNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 439 l~~~~g~~~~~~~~~~~~~~~~~~~ 463 (503)
+.+..| |+..|...++..+++.+.
T Consensus 164 l~~~~g-~~~~f~~~~~~~~~~~l~ 187 (475)
T TIGR00924 164 IAENYG-YHVGFNLAAVGMVIGLLT 187 (475)
T ss_pred HHHhcC-hHHHHHHHHHHHHHHHHH
Confidence 998876 888888876555444333
No 158
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.33 E-value=9.1e-12 Score=118.42 Aligned_cols=163 Identities=9% Similarity=-0.029 Sum_probs=119.3
Q ss_pred HHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 010692 292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 370 (503)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (503)
....++...........+|.|..+. +.++... .+.+...++..++.++.|+++||+||| +.+..+..+.....
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r-----~~~~~~~~~~~~~~ 78 (365)
T TIGR00900 5 FAAQLISLIGTAITQVALPLYVLAG-TGSASVLSLAALAGMLPYVVLSPIAGALADRYDRK-----KVMIGADLIRAVLV 78 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchh-----HHHHHHHHHHHHHH
Confidence 3444555555555666677777764 4554433 555677788899999999999999998 66666555544444
Q ss_pred HHHHHhh-----hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh
Q 010692 371 LTAFCLS-----SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 445 (503)
Q Consensus 371 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 445 (503)
....... +.+...+..++.+.+.+...+....++.+..|+++|+++.++.+....+ |.+++|.+.+++.+..|
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g- 156 (365)
T TIGR00900 79 AVLPFVALLGGLNIWQVYVLAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSL-FYIVGPGIGGLMYATLG- 156 (365)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHH-HHHHHHHHHHHHHHHhh-
Confidence 4443334 6666677777777877788888889999999999999999999888777 88999999999988776
Q ss_pred HHHHHHHHHHHHHHHHH
Q 010692 446 WRKTTLALTSIFFLAAG 462 (503)
Q Consensus 446 ~~~~~~~~~~~~~~~~~ 462 (503)
|+..+++.++..++..+
T Consensus 157 ~~~~~~~~~~~~~~~~~ 173 (365)
T TIGR00900 157 IKWAIWVDAVGFAISAL 173 (365)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 77777776655444433
No 159
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.32 E-value=4.5e-11 Score=115.01 Aligned_cols=174 Identities=13% Similarity=0.011 Sum_probs=121.3
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcc-cccchhhHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQM-GATISNAFKLLSAA 362 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 362 (503)
.+.++......+...+.++++..++|.|+++..|.++... .+.........++.+++|+++||+ ||| +.+..+
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrr-----r~iliG 82 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNR-----MAVMLG 82 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcH-----HHHHHH
Confidence 3455666666677777888899999999998888886554 444566677788899999999998 998 666555
Q ss_pred HHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC--CchhHHHHHHHHHhhcccccchhhHHHH
Q 010692 363 TFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 363 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 439 (503)
.++..+..++..... +.........+...+.+...+....++.+.+|++ .|+++.++.+...++ |+.++|.+.|++
T Consensus 83 ~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nl-G~~iap~l~g~L 161 (493)
T PRK15462 83 ALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNV-GSIIAPIACGYA 161 (493)
T ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHHHHHHHCCCCCccccceehHHHHHHHH-HHHHHHHHHHHH
Confidence 555544433332221 1122222233333444455566778888989875 799999999999997 999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 440 QDHVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 440 ~~~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
.+..| |+..|...++..+++.+.+.
T Consensus 162 ~~~~G-w~~~F~iaaigm~l~li~~~ 186 (493)
T PRK15462 162 QEEYS-WAMGFGLAAVGMIAGLVIFL 186 (493)
T ss_pred HhhhC-hHHHHHHHHHHHHHHHHHHH
Confidence 98876 88888876655544444433
No 160
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.32 E-value=5.7e-12 Score=121.72 Aligned_cols=134 Identities=13% Similarity=0.116 Sum_probs=113.6
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHH-HhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATA-GCGSSFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~-~~~~~~~~~~l~~~r~l~G~g~~~~ 143 (503)
.+++|.+..+.+++.+.+.++..++.++.|++.||+|||+.+.++..+.++..+ +....++.+.+.+..++.|++.+..
T Consensus 266 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (405)
T TIGR00891 266 KADLGLSPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGI 345 (405)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccc
Confidence 567899999999999999999999999999999999999998888776533332 3334466777777778888777777
Q ss_pred hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHH
Q 010692 144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGE 198 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~ 198 (503)
.+...+++.|.+|+++|++++|+.+....+|..++|++++.+.++.| |+..+...
T Consensus 346 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 346 WGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred hhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 78888999999999999999999999999999999999999999888 87766553
No 161
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.32 E-value=2.3e-11 Score=111.54 Aligned_cols=150 Identities=17% Similarity=0.088 Sum_probs=125.5
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGE 140 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~g~ 140 (503)
|-+++..|.+.+.++++.-+|.++..++.++.|++.|| +.|+.+.....+.++..+...+. ++.+..++.-++.|++.
T Consensus 236 P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr-~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~ 314 (394)
T COG2814 236 PFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR-GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAF 314 (394)
T ss_pred HHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc-cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHh
Confidence 44477889999999999999999999999999999999 99999888877777777766554 55666666777777777
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
+.........+++ ..++++..+.+++...+++|..+|..+||.+.+++|+....++.+++.++..++.+...
T Consensus 315 ~~~~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgia~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~ 386 (394)
T COG2814 315 SPALQGLQTRLAR-LAPDAADLAGSLNVAAFNLGIALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSA 386 (394)
T ss_pred hhhhhHHHHHhcc-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666666666666 34567999999999999999999999999999999999999999998887777766554
No 162
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.30 E-value=7.5e-11 Score=114.77 Aligned_cols=173 Identities=17% Similarity=0.132 Sum_probs=113.7
Q ss_pred hhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHH
Q 010692 284 QEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAA 362 (503)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 362 (503)
+++.++...+...........+....|.+ ++ .+.++.+. ...+...++..++.++.|++.||+++| +.+..+
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~-~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~-----~~~~~~ 97 (438)
T TIGR00712 25 RWQVFLGIFFGYAAYYLVRKNFALAMPYL-VE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPR-----VFLPAG 97 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhccHHhhhHHH-HH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCc-----eehHHH
Confidence 34444444444444444444455566644 44 37776555 455677788999999999999999998 555444
Q ss_pred HHHHHHHHHHHHHh----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHH
Q 010692 363 TFLGAISCLTAFCL----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 438 (503)
Q Consensus 363 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 438 (503)
.++..+..+..... .+.+...+..++.+++.+..+++....+.+.+|+++|+++.|+.+..... |..++|.+.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~l~~~ 176 (438)
T TIGR00712 98 LILSAAVMLLMGFVPWATSSIAIMFVLLFLNGWFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNI-GGGIPPLLVLL 176 (438)
T ss_pred HHHHHHHHHHHhccccccchHHHHHHHHHHHHHHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHh-HhHHHHHHHHH
Confidence 44444333332221 23334444555666666667777778888889999999999999888777 77778877776
Q ss_pred HHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692 439 LQDHVNNWRKTTLALTSIFFLAAGIW 464 (503)
Q Consensus 439 l~~~~g~~~~~~~~~~~~~~~~~~~~ 464 (503)
..+...+|+..|++.+++.++..+..
T Consensus 177 ~~~~~~~w~~~f~~~~~~~~i~~~~~ 202 (438)
T TIGR00712 177 GMAWFNDWHAALYFPAICAIIVALFA 202 (438)
T ss_pred HHHHhhhhHHHHHHHHHHHHHHHHHH
Confidence 65544458888888777665544433
No 163
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.29 E-value=2.2e-11 Score=120.28 Aligned_cols=155 Identities=8% Similarity=-0.032 Sum_probs=119.9
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HH-H-HHHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DF-W-SIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~-~-~l~~~r~l~G 137 (503)
|.+.+++|.+....++......+...++.++.|+++||+|||++++.+.++.+++.++.+... +. + ....+-++.+
T Consensus 295 p~i~~~~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~~~~~~~~~ 374 (479)
T PRK10077 295 PEIFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVALLSMLFYV 374 (479)
T ss_pred HHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHHHHHHHHHH
Confidence 555677888877777777788889999999999999999999999999999998887776442 11 1 2223344444
Q ss_pred hhhhh-hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh------cCcchhHHHHHHHHHHHHHHHHHHH
Q 010692 138 VGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV------GSHLNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 138 ~g~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l------~~~~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
.+.+. ..+....++.|.+|+++|++++++......+|.++++.+.+.+ .+..+|++.|++.++++++..++.+
T Consensus 375 ~~~~~~~~~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 454 (479)
T PRK10077 375 AAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMW 454 (479)
T ss_pred HHHhccccchhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHHHHHHHHHHHH
Confidence 44443 3366789999999999999999999999999998886665543 4567899999999988888877777
Q ss_pred hccccc
Q 010692 211 VIKPLQ 216 (503)
Q Consensus 211 ~~~p~~ 216 (503)
++.||+
T Consensus 455 ~~~~e~ 460 (479)
T PRK10077 455 KFVPET 460 (479)
T ss_pred hccccC
Confidence 776664
No 164
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.27 E-value=8.4e-11 Score=112.79 Aligned_cols=164 Identities=14% Similarity=0.066 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692 291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
.....++...+.+....++|.++++..+.++... .......+...+..++.|+++||+++| +.+..+..+....
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k-----~~l~~~~~~~~~~ 89 (400)
T PRK11646 15 LLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAK-----PMIVTGMLMRAAG 89 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCch-----HHHHHHHHHHHHH
Confidence 3455666677777778888888888888886555 333555667777789999999999998 7777777666666
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692 370 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 449 (503)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 449 (503)
.+.....++.+...+..++.+.+.+...++....+.+..|+++|+++.|+.+...+. |..++|.+.|++. ..| |+..
T Consensus 90 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~g~l~-~~g-~~~~ 166 (400)
T PRK11646 90 FATMAIAHEPWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGRFFSLLMMQDSA-GAVIGALLGSWLL-QYD-FRLV 166 (400)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-Hhh-HHHH
Confidence 666655566666666666666666666677788888999999999999999888888 9999999999998 444 7777
Q ss_pred HHHHHHHHHHHHH
Q 010692 450 TLALTSIFFLAAG 462 (503)
Q Consensus 450 ~~~~~~~~~~~~~ 462 (503)
|++.+...++..+
T Consensus 167 f~~~~~~~~~~~i 179 (400)
T PRK11646 167 CATGAVLFVLAAA 179 (400)
T ss_pred HHHHHHHHHHHHH
Confidence 7776665554433
No 165
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=99.26 E-value=4.5e-09 Score=97.12 Aligned_cols=321 Identities=15% Similarity=0.050 Sum_probs=176.8
Q ss_pred chhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhc
Q 010692 74 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 153 (503)
Q Consensus 74 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 153 (503)
-.+.+.-+-.+...+.-+.+.++.+|+..+.=.....++..++.++.++++|.+.=+++-++.+++.|........+..
T Consensus 60 ~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt~- 138 (402)
T PF02487_consen 60 STGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLTH- 138 (402)
T ss_pred cchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHHH-
Confidence 3455666777778888888889999987665566777788889999999999999999999999999988877777644
Q ss_pred cCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--hHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccc
Q 010692 154 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--WRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVV 231 (503)
Q Consensus 154 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--wr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 231 (503)
.+++ ...+-+.++.+.+.++|+..-..+.. .| -|..+++...+.++..+..++.+|.........+.+...
T Consensus 139 ~y~~----~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~~~-- 211 (402)
T PF02487_consen 139 FYGK----SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESESED-- 211 (402)
T ss_pred hcCc----cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCCCC--
Confidence 5543 35788888888888888887666655 44 477888877776666666566665422111000000000
Q ss_pred cccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhh-cccc
Q 010692 232 ASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYS-YWGP 310 (503)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 310 (503)
. .+++...++..+ .+.+...+ ...++.++..+.++ + .++-.+..++..+.++ -..|
T Consensus 212 -----~----~~~~~~~~~~~~----~~~~~~~~----~~~~~k~~~~k~Ll-----~-ymiPL~lVY~aEY~InqGv~~ 268 (402)
T PF02487_consen 212 -----E----AEDDLLESETSE----SKPDSSSK----LSFKEKLKRLKPLL-----W-YMIPLFLVYFAEYFINQGVAP 268 (402)
T ss_pred -----c----cccccccccccc----ccccccch----hhHHHHHHHHHHHH-----H-HHHHHHHHHHHHHHHHhchHH
Confidence 0 000000000000 00000000 01111111122222 2 2222233333333322 1222
Q ss_pred chhhhhcccchh-hH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHH---HHHhhhHHHHHHH
Q 010692 311 KAGYNIYHMSNA-DM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLT---AFCLSSLYGFLAL 385 (503)
Q Consensus 311 ~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 385 (503)
.........++. .. .+...+.++..+++--..++ |+ |+ . .++...-.+-.+.+++ ..+.++.|..++.
T Consensus 269 tl~fp~~~~~~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~--l-wils~LQ~~nl~~~~l~s~~~fipsi~ivf~l 341 (402)
T PF02487_consen 269 TLLFPNSFFSPRDQYRWYQLLYQLGVFISRSSLPFF--RI--RR--L-WILSLLQVINLVFLLLQSWYRFIPSIWIVFVL 341 (402)
T ss_pred HhcCCccCCCHHHHHHHHHHHHHHHHhhhhcceeee--eh--hh--H-HHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 222221122222 22 44455666655554432221 12 21 0 2221111111111111 1223566777777
Q ss_pred HHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692 386 FTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
++.-|...|..+...+..+.++.++++|..++|.....-.. |..++.
T Consensus 342 if~eGLlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~-GI~lAg 388 (402)
T PF02487_consen 342 IFYEGLLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSL-GILLAG 388 (402)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhH-HHHHHH
Confidence 77788888888888899999999999999999998655444 655544
No 166
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.26 E-value=2.6e-11 Score=114.64 Aligned_cols=162 Identities=16% Similarity=0.139 Sum_probs=121.4
Q ss_pred HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHH
Q 010692 295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 373 (503)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (503)
.++............|.++.+.++.++... .+.+...++..++.++.|+++||+||| +.+..+.++..+..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~l~~~~~~~~~~~~~~ 79 (352)
T PF07690_consen 5 FFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRR-----RVLIIGLLLFALGSLLL 79 (352)
T ss_dssp HHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HH-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCe-----eeEeehhhhhhhHHHHh
Confidence 444455555556666656666677776554 555677788999999999999999998 66666666655553333
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692 374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 453 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 453 (503)
...++.+..++..++.+.+.+...+....++.+.+|+++|+++.++.+....+ |.+++|.+.+.+.+..+ |+..+++.
T Consensus 80 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~~-~~~~~~~~ 157 (352)
T PF07690_consen 80 AFASNFWLLLIARFLLGIGSGFFSPASNALIADWFPPEERGRAFGILSAGFSL-GSILGPLLGGFLISYFG-WRWAFLIS 157 (352)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHHHHHHHHHHHHHH-HHHHHHHHHHHCCCHCH-HCCHHHHH
T ss_pred hhhhhHHHHhhhccccccccccccccccccccccchhhhhhhccccccchhhh-hhhcccchhhhhhhccc-cccccccc
Confidence 33355567777778888888888889999999999999999999999888888 99999999999987766 77788887
Q ss_pred HHHHHHHHHH
Q 010692 454 TSIFFLAAGI 463 (503)
Q Consensus 454 ~~~~~~~~~~ 463 (503)
+++.++..++
T Consensus 158 ~~~~~~~~il 167 (352)
T PF07690_consen 158 AILSLIAAIL 167 (352)
T ss_dssp HHHHHHHHHH
T ss_pred cchhhhhhhh
Confidence 7776666553
No 167
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.26 E-value=1.6e-11 Score=119.93 Aligned_cols=149 Identities=9% Similarity=-0.070 Sum_probs=106.6
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc--CCchhH-HHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH--NPFRLI-GVGLSVWTFATAGCGS--SFDFWSIAICRMLVGVG 139 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~--Grr~~l-~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~g 139 (503)
++++|.+..+.++..+.+.++..++.+++|+++||+ |||+.. +....+..++.++..+ ..+.+...++.++.|.+
T Consensus 281 ~~~~g~s~~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 360 (452)
T PRK11273 281 KEVKHFALDKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFL 360 (452)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHH
Confidence 455788888999999999999999999999999999 555432 2222333333333222 23444444555555554
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHH-HHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVA-LGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~-~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
..........+..|.+|+++||+++|+.+....+|.. .+|.+.+.+.+..||+..|++.++.+++..+....+.
T Consensus 361 ~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~ 435 (452)
T PRK11273 361 IYGPVMLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVM 435 (452)
T ss_pred HHhHHHHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHh
Confidence 3322333345678999999999999999988888765 4899999999999999999998887777766665544
No 168
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.25 E-value=1.9e-10 Score=113.06 Aligned_cols=176 Identities=11% Similarity=-0.043 Sum_probs=120.1
Q ss_pred Hhhhh-hHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHH
Q 010692 282 LLQEK-VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL 358 (503)
Q Consensus 282 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~ 358 (503)
.+++| .++..+...++....++.+..+++.|+++.+|.+.... ..............+++|++.|| +||| +.
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r-----~~ 90 (500)
T PRK09584 16 AFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTK-----RV 90 (500)
T ss_pred hhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchH-----HH
Confidence 34555 47777777788888888899999999999899886544 32223333333344689999999 5998 66
Q ss_pred HHHHHHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC--CchhHHHHHHHHHhhcccccchhh
Q 010692 359 LSAATFLGAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPL 435 (503)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~ 435 (503)
+..+.++..+...+..... ..+.......+.+.+.+...+....+..+.+|++ .++.+.++.+...++ |.+++|.+
T Consensus 91 ~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~i-G~~~gp~i 169 (500)
T PRK09584 91 IMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINI-GSFFSMLA 169 (500)
T ss_pred HHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHH-HHHHHHHH
Confidence 6655555554444433332 3333334445556666666677778888888764 345678888888888 99999999
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692 436 VGVLQDHVNNWRKTTLALTSIFFLAAGIW 464 (503)
Q Consensus 436 ~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 464 (503)
.|++.+..| |+..|.+.++...++.+.+
T Consensus 170 ~g~l~~~~g-~~~~F~i~~i~~~i~~i~~ 197 (500)
T PRK09584 170 TPWLAAKYG-WSVAFALSVVGMLITVVNF 197 (500)
T ss_pred HHHHHHhhC-HHHHHHHHHHHHHHHHHHH
Confidence 999999877 8888888766555554433
No 169
>PRK09952 shikimate transporter; Provisional
Probab=99.24 E-value=5.2e-11 Score=115.71 Aligned_cols=148 Identities=14% Similarity=0.072 Sum_probs=111.8
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh---h-hHHHHHHHHHHHHHhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS---S-FDFWSIAICRMLVGVGE 140 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~-~~~~~l~~~r~l~G~g~ 140 (503)
.+++|.+......+.....+...++.++.|+++||+|||+++..+.++..++.+.... . ++.+.+++..++.|++.
T Consensus 278 ~~~~g~s~~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 357 (438)
T PRK09952 278 TQNLGLPRELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAH 357 (438)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHH
Confidence 5678888776666666667777888999999999999999988887766555443322 1 23445555667778888
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHH-hHHhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHHHHHHHHhc
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFY-MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~-~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
+...+...+++.|.+|.+.|+.+.++.. .+..+|..++|.+.+++.+.. +|+..+...++..++..+..+..
T Consensus 358 ~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~ 432 (438)
T PRK09952 358 DMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLM 432 (438)
T ss_pred HHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHc
Confidence 8888888999999999999998888854 445589999999999987633 48888888877777666655443
No 170
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.24 E-value=3.7e-11 Score=117.87 Aligned_cols=147 Identities=10% Similarity=-0.023 Sum_probs=107.3
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-------hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-------LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-------~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
.+++|.+..+.+.+.+++.++..++.+++|+++||+|||+ .+.+..++.++..++.+..++.+...+.-++.+
T Consensus 280 ~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~ 359 (476)
T PLN00028 280 YDRFGLSLETAGAIAASFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFS 359 (476)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHH
Confidence 5678999999999999999999999999999999998752 333333444444445555666666666666777
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
++.+...+...+++.+..| ++||.+.|+...+..+|..+++.+.+ ..+..+|+..|++.+++.++..++.++..
T Consensus 360 ~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~ 433 (476)
T PLN00028 360 IFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIH 433 (476)
T ss_pred HHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHhee
Confidence 7666565666667777655 57999999998888788877776654 22345799999999888777766665554
No 171
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.24 E-value=1.6e-10 Score=113.02 Aligned_cols=172 Identities=12% Similarity=-0.011 Sum_probs=123.7
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAA 362 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~ 362 (503)
.+.++..+...+...+.++++..+++.|+++..|.+.... ...........+..+++|+++|| +||| +.+..+
T Consensus 13 p~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r-----~~~~~g 87 (489)
T PRK10207 13 PRPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTK-----RTIVLG 87 (489)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchH-----HHHHHH
Confidence 3556666666677778888899999999999888886544 33344444555566789999999 9999 777666
Q ss_pred HHHHHHHHHHHHHhhh-HHHHHHHHHHHHHHHhhccchhhHHhhcccCCC--CchhHHHHHHHHHhhcccccchhhHHHH
Q 010692 363 TFLGAISCLTAFCLSS-LYGFLALFTVGELLVFATQAPVNYVCLHSVKPS--LRALSMAISTVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 363 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~g~~~~~~~~g~l 439 (503)
.++..+..+......+ .....+...+.+.+.+...+....++.+.+|++ +|+.+.++.+...++ |..++|.+.|++
T Consensus 88 ~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~ni-g~~~g~~l~g~l 166 (489)
T PRK10207 88 AIVLAIGYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINI-GSLISLSLAPVI 166 (489)
T ss_pred HHHHHHHHHHHHHhccchhHHHHHHHHHHhccccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHH-HHHHHHHHHHHH
Confidence 6666555544444333 222334455566666777788888999999886 457789999888888 999999999999
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHH
Q 010692 440 QDHVNNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 440 ~~~~g~~~~~~~~~~~~~~~~~~~ 463 (503)
.+..| |+..|++.++..+++.+.
T Consensus 167 ~~~~g-w~~~F~i~~i~~~~~~~~ 189 (489)
T PRK10207 167 ADKFG-YSVTYNLCGAGLIIALLV 189 (489)
T ss_pred HHhhC-hHHHHHHHHHHHHHHHHH
Confidence 99887 888888765544444333
No 172
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.22 E-value=2.1e-10 Score=110.01 Aligned_cols=156 Identities=15% Similarity=0.057 Sum_probs=115.6
Q ss_pred HHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692 300 FVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 378 (503)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (503)
..........|.+.+ .++.++... ...+...++..++.++.|++.||+||| +.+..+.++..+..+.....++
T Consensus 19 ~~~~~~~~~~p~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~~~~~~~~~~~~~~~ 92 (385)
T TIGR00710 19 LGIDMYLPAFPEIAA-DLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRR-----PVLLLGLFIFALSSLGLALSNN 92 (385)
T ss_pred HHHHHhcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHcc
Confidence 334444445565544 467775544 555677788899999999999999998 6776666666666555555666
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 458 (503)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 458 (503)
.+...+..++.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+++.+
T Consensus 93 ~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-~~~~~~~~~~~~~ 170 (385)
T TIGR00710 93 IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSRIYSILMPVLAL-APAVAPLLGGYILVWLS-WHAIFAFLSLAGI 170 (385)
T ss_pred HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHH
Confidence 666666777777777777788888899999999999999999888777 88889999999988766 7777777666554
Q ss_pred HHHHH
Q 010692 459 LAAGI 463 (503)
Q Consensus 459 ~~~~~ 463 (503)
+..+.
T Consensus 171 ~~~~~ 175 (385)
T TIGR00710 171 LLSAL 175 (385)
T ss_pred HHHHH
Confidence 44433
No 173
>PRK10504 putative transporter; Provisional
Probab=99.22 E-value=2.1e-10 Score=112.98 Aligned_cols=170 Identities=14% Similarity=0.097 Sum_probs=126.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (503)
+.++...+..++.......+..+.|.+.++ +|.++... ...+...++..++.++.|+++||+||| +.+..+..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r-----~~~~~~~~ 83 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVR-----NIFFTAIV 83 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchH-----HHHHHHHH
Confidence 456666676777777777778889988876 67776554 444566677788999999999999998 56555544
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+.....+.....++.+.+++..++.+++.+...+.....+.+.+|+++|+++.|+.+...++ |..++|.+.|.+.+..|
T Consensus 84 ~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~~~g~l~~~~g 162 (471)
T PRK10504 84 LFTLGSLFCALSGTLNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYMAAMTFVTLPGQV-GPLLGPALGGLLVEYAS 162 (471)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHhhhHHHHHHHhhcc
Confidence 44444444444456666666677777777777777788888989889999999999877777 88899999999999876
Q ss_pred hHHHHHHHHHHHHHHHHHH
Q 010692 445 NWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 445 ~~~~~~~~~~~~~~~~~~~ 463 (503)
|+..|.+...+..+..+.
T Consensus 163 -w~~~f~~~~~~~~l~~~~ 180 (471)
T PRK10504 163 -WHWIFLINIPVGIIGAIA 180 (471)
T ss_pred -HHHHHHHHHHHHHHHHHH
Confidence 888888766555444433
No 174
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.22 E-value=6e-10 Score=96.71 Aligned_cols=160 Identities=11% Similarity=0.058 Sum_probs=124.5
Q ss_pred cCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-------h
Q 010692 52 EDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------F 124 (503)
Q Consensus 52 ~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~ 124 (503)
......+.+-|++++.+|+|.+|...+.++..+|..+ .++.|.+.|++|++.++.+|.+...+|..+...+ .
T Consensus 16 Gt~Y~Fs~yS~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~ 94 (250)
T PF06813_consen 16 GTTYTFSAYSPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSL 94 (250)
T ss_pred CcccchhhhhHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCcc
Confidence 3444456666788999999999999999999999987 5889999999999999999999999999887664 4
Q ss_pred HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Q 010692 125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 204 (503)
Q Consensus 125 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 204 (503)
++|.+.+..++.|.+.+.....+.....+.||+ +||.+.|+.-...+++..+-..+...+.+.-.-+..+.+...+.++
T Consensus 95 ~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v 173 (250)
T PF06813_consen 95 PVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVV 173 (250)
T ss_pred chHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHH
Confidence 688898888999888877767776777788885 6999999999999999988777776665543344444444444444
Q ss_pred HHHHHHhcc
Q 010692 205 FAVLAFVIK 213 (503)
Q Consensus 205 ~~~~~~~~~ 213 (503)
..+..++..
T Consensus 174 ~l~~~~~vr 182 (250)
T PF06813_consen 174 CLVAMFFVR 182 (250)
T ss_pred HHHHhhhee
Confidence 444444433
No 175
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.22 E-value=7.7e-11 Score=115.81 Aligned_cols=148 Identities=9% Similarity=0.044 Sum_probs=119.1
Q ss_pred ccccCCCccchhhHHH-HHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHh---hhh-hHHHHHHHHHHHHHhh
Q 010692 65 RGDFKLNNFQDGVLSS-AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICRMLVGVG 139 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s-~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l~G~g 139 (503)
.+++|.+..+.+++.. ...++..++.+++|+++||+|+|+.+.++.++.+++.++. +.. ++.+.+.+.-+++.++
T Consensus 250 ~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~ 329 (491)
T PRK11010 250 IRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLC 329 (491)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHH
Confidence 4678999999999874 6678999999999999999999998777666555544332 232 4555555566666666
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
.|...+...++..+..+++.+++..++.+...++|..+++.+.|.+.+..||+..|.+.++++++..++..+.
T Consensus 330 ~g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~ 402 (491)
T PRK11010 330 GGMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVC 402 (491)
T ss_pred HHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 6666667788899999999999999999999999999999999999998999999999998888776666554
No 176
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.22 E-value=5.7e-11 Score=113.92 Aligned_cols=146 Identities=12% Similarity=-0.065 Sum_probs=113.5
Q ss_pred ccccccCCCccchhhHHHHHH-HHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh------hhHHHHHHHHHHH
Q 010692 63 PKRGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS------SFDFWSIAICRML 135 (503)
Q Consensus 63 ~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~r~l 135 (503)
...+|.|.+++++|++..... ....++.++.|++.||+|+|+.+..+..+.++..+.... .++...++....+
T Consensus 233 ~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (390)
T TIGR02718 233 LYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAF 312 (390)
T ss_pred HHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHH
Confidence 334678999999999988876 466778999999999999999988877766443333221 1233444555566
Q ss_pred HHhhhhhhhhchhhhhhccCCC-CCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHH
Q 010692 136 VGVGEASFISLAAPFIDDNAPV-PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVL 208 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~ 208 (503)
.+++.+...+...+.+.+..++ +++++.+++.+...++|..+||.++|.+.+..||+..|++.+++.++..++
T Consensus 313 ~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 313 GSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 6777777777777887777766 789999999999999999999999999999899999999988776655443
No 177
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=99.22 E-value=1.1e-08 Score=96.23 Aligned_cols=312 Identities=11% Similarity=0.030 Sum_probs=182.7
Q ss_pred chhhH-HHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhh
Q 010692 74 QDGVL-SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFID 152 (503)
Q Consensus 74 ~~g~~-~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 152 (503)
..|+. .++-...+.+.+++.+.+.|+.|.|+.++++...+....+.+-+ +|-+-+++.-.+.|+|.+..+..--.+++
T Consensus 50 ~aGy~~~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt 128 (461)
T KOG3098|consen 50 YAGYYGQAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLT 128 (461)
T ss_pred CccHHHHHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehh
Confidence 34544 78888889999999999999999999999999999887776655 45667788999999999999999999999
Q ss_pred ccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc--------chhH-H----------HHHHHHHHHHHHHHHHHhcc
Q 010692 153 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH--------LNWR-Y----------AFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 153 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~--------~gwr-~----------~f~~~~~~~~~~~~~~~~~~ 213 (503)
|..+++.+.+..++.......+.++|...-..+... .+-+ . ...+.+++..+..+...-..
T Consensus 129 ~~st~~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~ 208 (461)
T KOG3098|consen 129 SNSTRETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFD 208 (461)
T ss_pred hcCChhhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhhee
Confidence 999999999999999999999988887665443211 1111 1 11111111111111111111
Q ss_pred ccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHH
Q 010692 214 PLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVL 293 (503)
Q Consensus 214 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (503)
.. +.+..... .+.. + ....+.++...+++++++...+..
T Consensus 209 ~~------p~~~~~~~---------------------~~~~-~-------------~~~~~~l~~~~~l~~~~~ml~L~~ 247 (461)
T KOG3098|consen 209 FL------PSKDVVNC---------------------KSSS-E-------------TSFSELLKLTFKLLKTPKMLLLFP 247 (461)
T ss_pred ec------Cccchhhh---------------------hhhc-c-------------ccHHHHHHHHHHHhcCHhHHHHHH
Confidence 00 00000000 0000 0 011112233445667777776666
Q ss_pred HHHHHHHHhhhhhccccchhhhh--cccchhh--HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692 294 GYIAYNFVIGAYSYWGPKAGYNI--YHMSNAD--MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
..+..+..........|..+.-. .+.+... +......+++.+++....+.+.+|..+.... ..+.....+-...
T Consensus 248 ~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v~~g~~~~~l~~rir~fg~~--~~~~~~~~~~~~~ 325 (461)
T KOG3098|consen 248 FFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEVIGGLDFSILSKRIRGFGRK--PTVLIGIIIHLIG 325 (461)
T ss_pred HHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHHHHHHHHHHHhhhhhhcccC--cchhHHHHHHHHH
Confidence 55444444333344444433222 2222222 2333455667777777777777765443211 3333333333333
Q ss_pred HHHH-HHhh-----------------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhccccc
Q 010692 370 CLTA-FCLS-----------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVP 431 (503)
Q Consensus 370 ~~~~-~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~ 431 (503)
+++. ...+ +.....++.++.|+.-.......+.++...+ |+.|.++.++.-.-... +..+
T Consensus 326 ~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~-~s~v 403 (461)
T KOG3098|consen 326 FLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSV-ASCV 403 (461)
T ss_pred HHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHH-HHHH
Confidence 2222 2111 2335566667777777777777787877777 77888888887655444 5443
No 178
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.21 E-value=8.6e-11 Score=113.35 Aligned_cols=148 Identities=16% Similarity=0.211 Sum_probs=131.3
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCc--hhHHHHHHHHHHHHHHhhh--------hhHHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGLSVWTFATAGCGS--------SFDFWSIAICRM 134 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~ 134 (503)
.+++|++..+...+.-+..+..+++++++|++.||+|.| ++++++++++.+..+...+ .++-+.+++.-+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 568999999999999999999999999999999999999 8988888888666665555 678889999999
Q ss_pred HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhc
Q 010692 135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 212 (503)
+.|+..|...+...++.+|..|+++.+..+|++....-....+||++.+.+.+..| -|+.+....++.++..++.++.
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999999999999999999999988776 8888888877766666655443
No 179
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.21 E-value=1.9e-10 Score=110.80 Aligned_cols=162 Identities=10% Similarity=0.039 Sum_probs=118.7
Q ss_pred HHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 010692 292 VLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 370 (503)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (503)
.+.+.+.......+....| .+++.++.+..+. ...+...++..++.+..|++.||+||| +.+..+.++..+..
T Consensus 14 ~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r-----~~~~~~~~~~~~~~ 87 (412)
T TIGR02332 14 FILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGAR-----RWIAGIMVLWGIAS 87 (412)
T ss_pred HHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChH-----HHHHHHHHHHHHHH
Confidence 3333433444444455555 5666788887665 555777888899999999999999998 77766666666666
Q ss_pred HHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh-----hhh
Q 010692 371 LTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-----VNN 445 (503)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-----~g~ 445 (503)
++....++.+.+.+.-++.|++.+...+....++.+.+|+++|+++.|+.+..... |.++++.+.+++.+. ..+
T Consensus 88 ~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~~~~~~g 166 (412)
T TIGR02332 88 TATMFATGPESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRARANALFMIAMPV-TMALGLILSGYILALDGLMALKG 166 (412)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCCCCCccc
Confidence 65556667777777777778888777777777888889989999999999877777 888899998888752 124
Q ss_pred HHHHHHHHHHHHHHH
Q 010692 446 WRKTTLALTSIFFLA 460 (503)
Q Consensus 446 ~~~~~~~~~~~~~~~ 460 (503)
|+..|.+.++..++.
T Consensus 167 wr~~f~~~~~~~l~~ 181 (412)
T TIGR02332 167 WQWLFLLEGFPSVIL 181 (412)
T ss_pred hhHHHHHHHHHHHHH
Confidence 888888866665443
No 180
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.21 E-value=1.7e-09 Score=91.54 Aligned_cols=316 Identities=11% Similarity=0.072 Sum_probs=176.8
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
.+++.-+-+.++....++|.+.-+..-...+...+.|.++|+-|||+.-+.-++.+.+++ +.-.+++|-.++++|.+.|
T Consensus 57 gPYvYyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGG 135 (454)
T KOG4332|consen 57 GPYVYYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGG 135 (454)
T ss_pred CceeeeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhh
Confidence 333355568889999999999888888888999999999999999997665555554443 3445788999999999999
Q ss_pred hhhhhhhhchhhh-hhccCCCCCchhHHHHHH--------hHHhHHHHHHHHHHHhhcCcc--hhHHHHHHHHHHHHHHH
Q 010692 138 VGEASFISLAAPF-IDDNAPVPQKTAWLSMFY--------MCIPTGVALGYVYGGVVGSHL--NWRYAFWGEAILMLPFA 206 (503)
Q Consensus 138 ~g~~~~~~~~~~~-i~~~~~~~~r~~~~~~~~--------~~~~~G~~~g~~l~~~l~~~~--gwr~~f~~~~~~~~~~~ 206 (503)
+..+..+.+--++ +.|.-. +|+.-.-+.. .+..+=.+++.+.+..+.+.+ |--.+|-..+.+..+..
T Consensus 136 iaTsLLFSaFEsWliaEHne--kr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigm 213 (454)
T KOG4332|consen 136 IATSLLFSAFESWLIAEHNE--KRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGM 213 (454)
T ss_pred HHHHHHHHHHHHHHHHHhhh--ccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHH
Confidence 9999887766665 556542 2332222221 122222333444444444433 33345544443322222
Q ss_pred HHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhh
Q 010692 207 VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEK 286 (503)
Q Consensus 207 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (503)
.+. +..+.+...+|.+.+.. .+.+....+.+..++
T Consensus 214 Avi---l~~W~ENygdps~~kdl------------------------------------------ltqf~gaa~aiaSD~ 248 (454)
T KOG4332|consen 214 AVI---LSSWSENYGDPSENKDL------------------------------------------LTQFKGAARAIASDE 248 (454)
T ss_pred HHH---HhhhhhccCChhhhHHH------------------------------------------HHHhhHhHHHHhcch
Confidence 222 23333333232222211 111113344555665
Q ss_pred hHHHHHHHHHHH-HHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692 287 VYVVNVLGYIAY-NFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365 (503)
Q Consensus 287 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (503)
++..+.-.-.++ ...+.....|.|..--+..+.+. . .+.+.+.+..++|+-+..++..|-..|.. ....+..++
T Consensus 249 ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~iPh-G-fiFatFMlASmLGSSla~Rl~s~s~~~ve---~ymqivf~v 323 (454)
T KOG4332|consen 249 KIALLGAIQSLFEGSMYTFVFLWTPALSPNDEEIPH-G-FIFATFMLASMLGSSLASRLLSRSSPKVE---SYMQIVFLV 323 (454)
T ss_pred HHHHHHHHHHHHhhhhheeeeeecccCCCCcccCCc-h-hHHHHHHHHHHHhhHHHHHHHhcCCcccc---hHHHHHHHH
Confidence 555443333333 33333445577766544333331 2 22234455666666666666555443322 233333333
Q ss_pred HHHHHHHHHHh-------hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 366 GAISCLTAFCL-------SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 366 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
....+.+.... .+....++.+++.-.+.+..+|.+.-+-.+.+|.+.|++.+-++..-.++
T Consensus 324 s~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkmRsqyIPEearstimNfFRvPLni 391 (454)
T KOG4332|consen 324 SIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKMRSQYIPEEARSTIMNFFRVPLNI 391 (454)
T ss_pred HHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHHHHhhCCHHHHhhhhhheechhhH
Confidence 32222222221 13334466777778888899999999999999999998777665443343
No 181
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.20 E-value=6.3e-11 Score=113.26 Aligned_cols=159 Identities=16% Similarity=0.121 Sum_probs=115.2
Q ss_pred HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 374 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
++.......+....|. +.+.++.+.... .+.+...++..++.++.|+++||+||| +.+..+.++..+..++..
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~ 78 (379)
T TIGR00881 5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPR-----VFLPIGLILCAIVNLFFG 78 (379)
T ss_pred hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCe-----ehhHHHHHHHHHHHHHHH
Confidence 3444445555666665 445577776554 555777888999999999999999999 666666666666666566
Q ss_pred HhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchh-hHHHHHhhhhhHHHHHHHH
Q 010692 375 CLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSP-LVGVLQDHVNNWRKTTLAL 453 (503)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~-~~g~l~~~~g~~~~~~~~~ 453 (503)
..++.+..++..++.+++.+...+....++.+.+|+++|+++.++.+..... |..++|. +.+.+.+..+ |+..+++.
T Consensus 79 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~~-~~~~~~~~ 156 (379)
T TIGR00881 79 FSTSLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSERGTWVSFWNCSHNV-GGGLLPPLVLFGIAELYS-WHWVFIVP 156 (379)
T ss_pred HhhhHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhheeeEeehhccchh-HHHHHHHHHHHHHHhcCC-chhHHHHH
Confidence 6667777777777778877788888888999999999999999999877777 8888884 5555555544 77777766
Q ss_pred HHHHHHHHH
Q 010692 454 TSIFFLAAG 462 (503)
Q Consensus 454 ~~~~~~~~~ 462 (503)
+.+.++..+
T Consensus 157 ~~~~~~~~~ 165 (379)
T TIGR00881 157 GIIAIIVSL 165 (379)
T ss_pred HHHHHHHHH
Confidence 655444333
No 182
>PRK15075 citrate-proton symporter; Provisional
Probab=99.19 E-value=6.9e-11 Score=114.88 Aligned_cols=128 Identities=9% Similarity=-0.017 Sum_probs=95.9
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH-h---hhhhHHHHHHHHHHHHHhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG-C---GSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~-~---~~~~~~~~l~~~r~l~G~g~ 140 (503)
++.+|.+..+.++....+.++..++.+++|+++||+|||+++..+..+..+.... . ...+++..+.+..++.|++.
T Consensus 266 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (434)
T PRK15075 266 KTVLHLSAADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLY 345 (434)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHH
Confidence 4457999888999999999999999999999999999999887765544332211 1 11234444445556667777
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHh-HHhHHHHHHHHHHHhhcCcchhH
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWR 192 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~gwr 192 (503)
+...+....++.|.+|+++|+.++++... +..++..++|.+.+++.+..|++
T Consensus 346 g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 346 GSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred HHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 76666677889999999999999998644 44455778999999998887754
No 183
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.19 E-value=4.6e-10 Score=106.77 Aligned_cols=148 Identities=17% Similarity=0.099 Sum_probs=107.3
Q ss_pred hHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692 287 VYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365 (503)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (503)
.++...+..+........+..+.|.++++.++.++... .+.....++..++.++.|++.||+||| +.+..+.++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~ 76 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPR-----YTTTLSLLL 76 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHH
Confidence 34555565666666677778888877778889887665 555777889999999999999999998 666666666
Q ss_pred HHHHHHHHHHhh-hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692 366 GAISCLTAFCLS-SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 441 (503)
Q Consensus 366 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 441 (503)
..+..+.....+ +.+..++..++.+.+. ....+...++.+..|+++|+++.++.....+. |..+++.+.+.+.+
T Consensus 77 ~~i~~~~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~i~~~l~~ 151 (366)
T TIGR00886 77 LAIPCLWAGLAVQSYSVLLLLRLFIGIAG-GSFASCMPWISFFFPKKIQGTALGLAAGWGNM-GGGVAQFVMPPIIG 151 (366)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHhc-hhhHhHHHHHHHhcCHhhhhHHHHHHHHHhHH-HHHHHHHHHHHHHH
Confidence 666555555555 6666655555555553 34456677888889889999999998766666 77767767666654
No 184
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.18 E-value=6.5e-10 Score=106.43 Aligned_cols=147 Identities=14% Similarity=0.043 Sum_probs=113.6
Q ss_pred hhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692 304 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 382 (503)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (503)
.....+|.+.+ .++.++.+. ...+...++..++.++.|++.||+||| +.+..+..+..+..+.....++.+.+
T Consensus 38 ~~~~~l~~~~~-~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l 111 (394)
T PRK10213 38 LPVSLLTPMAQ-DLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRR-----YVVILFAVLLTLSCLLVSFANSFSLL 111 (394)
T ss_pred HHHhhHHHHHH-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcH-----HHHHHHHHHHHHHHHHHHHHChHHHH
Confidence 33345666555 467776554 444567788888999999999999998 77766666666665555556677777
Q ss_pred HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFF 458 (503)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~ 458 (503)
++.-++.+++.+...+....++.+.+|+++|+.+.++.....++ |..++|.+.+.+.+..| |+..|++.+++.+
T Consensus 112 ~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~a~~~~~~~~~~-g~~ig~~l~~~l~~~~g-w~~~f~~~~~l~~ 185 (394)
T PRK10213 112 LIGRACLGLALGGFWAMSASLTMRLVPPRTVPKALSVIFGAVSI-ALVIAAPLGSFLGELIG-WRNVFNAAAVMGV 185 (394)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhhcC-HHHHHHHHHHHHH
Confidence 77777888888877888888889999999999999999887777 88999999999998876 8888877665443
No 185
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.18 E-value=4e-10 Score=107.84 Aligned_cols=158 Identities=11% Similarity=-0.032 Sum_probs=108.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (503)
|.++...+..++............+.+..+ .+.++... .......+...+..++.|++.||++|| +++..+.+
T Consensus 3 ~~f~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr-----~vl~~~~~ 76 (393)
T PRK11195 3 KGFYAIMAAQFFSALADNALLFAAIALLKE-LHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKG-----RVMFIANG 76 (393)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCc-----hhhHHHHH
Confidence 455666666666555444444444545444 44454333 455677788899999999999999999 66666655
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+..+..+......+. +...++.+.+.+...|...+++.+.+|+++|++++|+.+..... |.++||.++|++.+..
T Consensus 77 ~~~~~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~-~~~~Gp~lgG~l~~~~- 151 (393)
T PRK11195 77 IKLLGCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIA-AILLGTVLGGALADPH- 151 (393)
T ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHH-
Confidence 554443333332332 33445667777788888899999999999999999999877776 8899999999998853
Q ss_pred hHHHHHHHHHH
Q 010692 445 NWRKTTLALTS 455 (503)
Q Consensus 445 ~~~~~~~~~~~ 455 (503)
+...+.+.+.
T Consensus 152 -~~~~~~i~~~ 161 (393)
T PRK11195 152 -AEAALAVCAL 161 (393)
T ss_pred -HHHHHHHHHH
Confidence 4444444433
No 186
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.18 E-value=2.8e-10 Score=109.83 Aligned_cols=147 Identities=12% Similarity=-0.047 Sum_probs=117.5
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----hHHHHHHHHHHHHHhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----FDFWSIAICRMLVGVG 139 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l~G~g 139 (503)
.+++|.++.+.++......++..++.++.|++.||+|+|+.+.++.++..++.++..+. ++.+.++++-++.|+|
T Consensus 243 ~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g 322 (406)
T PRK15402 243 ISGEQLSSYEYGLLQVPVFGALIAGNLTLARLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFG 322 (406)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHH
Confidence 56789999999998888888999999999999999999999999988887777776654 3566677889999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
.+...+......... ++++||+..+..+....+|..+|+.+++.+.+..+|....+...+.+++..++...+
T Consensus 323 ~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (406)
T PRK15402 323 IGLANAGLYRLTLFS-SDVSKGTVSAAMGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLLLVRIF 394 (406)
T ss_pred HHHHhhhHHHHHhhh-ccccccHHHHHHHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 988777666655444 447899999999999999999999999999888787766666555555444443333
No 187
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.18 E-value=5.9e-10 Score=106.51 Aligned_cols=168 Identities=15% Similarity=0.021 Sum_probs=125.4
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATF 364 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~ 364 (503)
+.++...+..+............+|.+.++ +|.+.... ...+...++..++.++.|++.||+||| +.+..+..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~ 76 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLK-----HILLFLVA 76 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccH-----HHHHHHHH
Confidence 345555565666666666667777776554 67775544 555777889999999999999999998 77777766
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 365 LGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+..+..++....++.+.+++.-++.+.+.+...+.....+.+..++++|+.+.+.......+ |..++|++.+++.+..+
T Consensus 77 ~~~~~~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~g~~l~~~l~~~~g 155 (382)
T PRK10091 77 LCVIGNAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVTAAVAGMVSGMTV-ANLLGIPLGTYLSQEFS 155 (382)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhhHHHHHHHHHHHH-HHHHhccHHHHHhhhcc
Confidence 66666666666677777777777777777766666667777878888899999998766666 88889999999988766
Q ss_pred hHHHHHHHHHHHHHHHH
Q 010692 445 NWRKTTLALTSIFFLAA 461 (503)
Q Consensus 445 ~~~~~~~~~~~~~~~~~ 461 (503)
|+..|.+.++..++..
T Consensus 156 -wr~~f~~~~~~~~~~~ 171 (382)
T PRK10091 156 -WRYTFLLIAVFNIAVL 171 (382)
T ss_pred -HHHHHHHHHHHHHHHH
Confidence 8888888776554443
No 188
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.18 E-value=2.2e-10 Score=111.85 Aligned_cols=121 Identities=17% Similarity=0.125 Sum_probs=104.0
Q ss_pred CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhhhhhhhchhh
Q 010692 71 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAP 149 (503)
Q Consensus 71 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~g~~~~~~~~~~ 149 (503)
+..+.+++.++..++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+++..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888888899999999999999999999999999998888888777665 46677778888999999988899999
Q ss_pred hhhccCC-------CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchh
Q 010692 150 FIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 191 (503)
Q Consensus 150 ~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 191 (503)
+++|..+ ++++|.+.++.+....+|..+++.+.+.+.+..||
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9998865 45679999999999999999999999988765554
No 189
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.17 E-value=5.1e-10 Score=107.51 Aligned_cols=161 Identities=15% Similarity=0.064 Sum_probs=113.9
Q ss_pred HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHH
Q 010692 295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTA 373 (503)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (503)
.+....+.......+|.+.++ .+.+.... ...+...++..++.++.|+++||+||| +.+..+.....+.....
T Consensus 12 ~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r-----~~l~~~~~~~~i~~~~~ 85 (392)
T PRK10473 12 VLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRK-----PVAIPGAALFIIASLLC 85 (392)
T ss_pred HHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCCh-----HHHHHHHHHHHHHHHHH
Confidence 344444444555667766655 66665544 445667778888999999999999998 66666665555555555
Q ss_pred HHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHH
Q 010692 374 FCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLAL 453 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~ 453 (503)
...++.+......++.+.+.+...+....++.+.+|+++|+++.++.+..... +..++|.+.+.+.+..+ |+..+++.
T Consensus 86 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~i-~~~~~~~i~~~l~~~~g-~~~~~~~~ 163 (392)
T PRK10473 86 SLAETSSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRAKVLSLLNGITCI-IPVLAPVLGHLIMLKFP-WQSLFYTM 163 (392)
T ss_pred HHhCcHHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhCcC-hHHHHHHH
Confidence 55555555555556666666666677788888999999999999999877777 77888988888877665 77777777
Q ss_pred HHHHHHHHHH
Q 010692 454 TSIFFLAAGI 463 (503)
Q Consensus 454 ~~~~~~~~~~ 463 (503)
+.+.++..++
T Consensus 164 ~~~~~i~~~~ 173 (392)
T PRK10473 164 AAMGILVLLL 173 (392)
T ss_pred HHHHHHHHHH
Confidence 6655544443
No 190
>TIGR00895 2A0115 benzoate transport.
Probab=99.17 E-value=9.8e-11 Score=112.78 Aligned_cols=153 Identities=14% Similarity=0.171 Sum_probs=112.3
Q ss_pred HHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh
Q 010692 299 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 377 (503)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (503)
...........|.+.++ ++.++... .+.....++.+++.++.|++.||++|| +.+..+.++..+..++....+
T Consensus 30 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~ 103 (398)
T TIGR00895 30 GYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRK-----RVLLWSILLFSVFTLLCALAT 103 (398)
T ss_pred HHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHcc
Confidence 33344455566666554 67775444 445667788899999999999999988 666666655555555555556
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 457 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 457 (503)
+.+..++..++.+++.+...+....++.+..|+++|+++.++.+....+ |..++|.+.+++.+..| |+..+++.+++.
T Consensus 104 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~g-~~~~~~~~~~~~ 181 (398)
T TIGR00895 104 NVTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRGTAVGLMFCGYPI-GAAVGGFLAGWLIPVFG-WRSLFYVGGIAP 181 (398)
T ss_pred chHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhchhHhhHhhHHHH-HHHHHHHHHHHHhhccc-ceeehhhhhhHH
Confidence 6666666677777777777888889999999889999999999877777 88889999999988776 767777665443
Q ss_pred HH
Q 010692 458 FL 459 (503)
Q Consensus 458 ~~ 459 (503)
.+
T Consensus 182 ~~ 183 (398)
T TIGR00895 182 LL 183 (398)
T ss_pred HH
Confidence 33
No 191
>PRK11043 putative transporter; Provisional
Probab=99.16 E-value=9.5e-10 Score=105.97 Aligned_cols=156 Identities=16% Similarity=0.071 Sum_probs=108.3
Q ss_pred Hhhhhhccccch--hhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh
Q 010692 301 VIGAYSYWGPKA--GYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS 377 (503)
Q Consensus 301 ~~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (503)
.+.....+.|.+ +++..+.++... ...++..++..++.++.|+++||++|| +.+..+..+..+..+.....+
T Consensus 18 ~~~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~~~~~~~~~ 92 (401)
T PRK11043 18 GFLATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRK-----PVLLAGLSLFALGSLGMLWVE 92 (401)
T ss_pred HHHHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCc-----HHHHHHHHHHHHHHHHHHHhc
Confidence 333444555544 445577776554 455677888899999999999999999 666665555555555444555
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHH
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIF 457 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~ 457 (503)
+.+...+..++.+.+.+...+.....+.+.+++++++...+..+..... +..++|.+.+++.+..| |+..++..+.+.
T Consensus 93 ~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~~~~~~~~~ 170 (401)
T PRK11043 93 SAAQLLVLRFVQAVGVCSAAVIWQALVIDRYPAQKANRVFATIMPLVAL-SPALAPLLGAWLLNHFG-WQAIFATLFAIT 170 (401)
T ss_pred CHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcCC-hHHHHHHHHHHH
Confidence 6666655555655555555555566778888888888888888766666 77889999999998876 888787776665
Q ss_pred HHHHHH
Q 010692 458 FLAAGI 463 (503)
Q Consensus 458 ~~~~~~ 463 (503)
++..+.
T Consensus 171 ~~~~~~ 176 (401)
T PRK11043 171 LLLILP 176 (401)
T ss_pred HHHHHH
Confidence 554443
No 192
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.15 E-value=4.4e-10 Score=111.39 Aligned_cols=155 Identities=9% Similarity=-0.077 Sum_probs=105.3
Q ss_pred cccccccCCCccchhh------------HHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH----
Q 010692 62 TPKRGDFKLNNFQDGV------------LSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD---- 125 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~------------~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~---- 125 (503)
|.+.++.|.+..+.+. ...+..++..++.++.+++.||+|||++++++..+.+++.++.++..+
T Consensus 312 p~i~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~~~~~~~~ 391 (502)
T TIGR00887 312 KVILSAIGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQLMGFFILTVLFFVLGFAYNHLST 391 (502)
T ss_pred HHHHHHHcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHHHHHHHHhcch
Confidence 4445667776543221 233445566678889999999999999998888887777666654321
Q ss_pred HHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc----------chhHHHH
Q 010692 126 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH----------LNWRYAF 195 (503)
Q Consensus 126 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~----------~gwr~~f 195 (503)
...+...-+....+.....+....+.+|.+|.+.|++++++.+....+|.+++|.+.+.+.+. .++...|
T Consensus 392 ~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 471 (502)
T TIGR00887 392 HGFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQFGFLYLAQHGDPTKGYPTGIWMGHVL 471 (502)
T ss_pred hHHHHHHHHHHHHHhcCCCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHHHhhhhhccccccccccccccchHHH
Confidence 111111111111222223455667789999999999999999999999999999999988763 3556788
Q ss_pred HHHHHHHHHHHHHHHhcccccc
Q 010692 196 WGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
++.+++.++..+. ++++||+.
T Consensus 472 ~i~~~~~~~~~i~-~~~lpEt~ 492 (502)
T TIGR00887 472 EIFALFMFLGILF-TLLIPETK 492 (502)
T ss_pred HHHHHHHHHHHHH-heEeccCC
Confidence 8888777766554 45557743
No 193
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.15 E-value=1.7e-10 Score=111.10 Aligned_cols=144 Identities=13% Similarity=0.207 Sum_probs=106.9
Q ss_pred ccccCCCccchhhHHHHH-HHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHh---hhh-hHHHHHHHHHH----H
Q 010692 65 RGDFKLNNFQDGVLSSAF-MVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGC---GSS-FDFWSIAICRM----L 135 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~-~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~----l 135 (503)
.+++|+++++.+++.+.. .++..++.+++|++.||+|+|+.+..+..+..+..+.. ++. ++.+.+++.-+ .
T Consensus 237 ~~~~G~~~~~~g~~~~~~~~~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 316 (402)
T PRK11902 237 IRGAGFSAGEVGIVNKTLGLAATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLC 316 (402)
T ss_pred HHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Confidence 577899999999988665 45689999999999999999998877777666554433 343 45566555543 4
Q ss_pred HHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 136 VGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
.|++.+...+....++.+.+|.++ .++.+...++|..+++.++|.+.+.+||+..|.+.++++++..++.+..
T Consensus 317 ~g~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~ 389 (402)
T PRK11902 317 GGMGTAAFVALLMALCNRSFSATQ----YALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLM 389 (402)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHH----HHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHH
Confidence 556666667777777777777554 4556666677887777789999999999999999998887766555433
No 194
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=99.15 E-value=2.9e-10 Score=103.85 Aligned_cols=126 Identities=17% Similarity=0.178 Sum_probs=99.9
Q ss_pred ccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh----hcCCchhH-HHHHHHHHHHHHHhhhhhHH---------
Q 010692 61 FTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK----SHNPFRLI-GVGLSVWTFATAGCGSSFDF--------- 126 (503)
Q Consensus 61 ~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d----r~Grr~~l-~~~~~~~~~~~~~~~~~~~~--------- 126 (503)
++++..++|++....+.+--+..+...+.+++.|..+| ||||||.+ ..+.+..+++.++.+++.++
T Consensus 55 ~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~ 134 (498)
T KOG0637|consen 55 LTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER 134 (498)
T ss_pred ccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence 36667999999999999999999999999999999999 58987754 45555666777777776443
Q ss_pred --------HHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchh-HHHHHHhHHhHHHHHHHHHHHhhc
Q 010692 127 --------WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTA-WLSMFYMCIPTGVALGYVYGGVVG 186 (503)
Q Consensus 127 --------~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~-~~~~~~~~~~~G~~~g~~l~~~l~ 186 (503)
..++++--+.=++.-.....+-+++.|...++++.+ +++++.....+|..+|..+++++.
T Consensus 135 ~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~~g~y~~ 203 (498)
T KOG0637|consen 135 KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYALGSYLG 203 (498)
T ss_pred cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeeecccccC
Confidence 334455555556666788889999999998777666 999999999999999999988553
No 195
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.14 E-value=7.8e-10 Score=107.55 Aligned_cols=158 Identities=12% Similarity=0.080 Sum_probs=115.4
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHH
Q 010692 289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 367 (503)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 367 (503)
....+..+.............|.+ ++.++.++... ...+...++..++.++.|++.||+||| +.+..+.++..
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r-----~~l~~~~~~~~ 94 (426)
T PRK12307 21 FSAWLGYVFDGFDFMLIFYIMYLI-KADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRK-----PLMMWSIVAYS 94 (426)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHHHHHH
Confidence 333333444344444444455544 45577776544 555677788899999999999999999 77777776666
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692 368 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 447 (503)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 447 (503)
+..+.....++.+.+.+.-++.+++.+...+....++.+..|+++|+++.++......+ |.++++.+.+.+.+..+ |+
T Consensus 95 ~~~~~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~l-g~~~~~~l~~~l~~~~~-w~ 172 (426)
T PRK12307 95 VGTGLSGLASGVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKSKASAFLVSGFGI-GNIIAAYFMPSFAEAYG-WR 172 (426)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhhHhhhHHHHHHhH-HHHHHHHHHHHHcccCC-HH
Confidence 66666666677777777777888777777888888889999999999999998776666 88888888888877765 88
Q ss_pred HHHHHHH
Q 010692 448 KTTLALT 454 (503)
Q Consensus 448 ~~~~~~~ 454 (503)
..+++..
T Consensus 173 ~~f~i~~ 179 (426)
T PRK12307 173 AAFFVGL 179 (426)
T ss_pred HHHHHHH
Confidence 7777643
No 196
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.14 E-value=8.3e-10 Score=109.05 Aligned_cols=166 Identities=15% Similarity=0.121 Sum_probs=122.4
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHH
Q 010692 289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGA 367 (503)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~ 367 (503)
....+..++...-...+..-+|.+..+ ++.+.... .....+.++...+.+..|+++||+||| +.+..+..+..
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk-----~~l~~~~~~~~ 82 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFK-----RLLMLGGTLFG 82 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-----HHHHHHHHHHH
Confidence 344444555555566667778888665 66665443 555666777788889999999999999 77777777776
Q ss_pred HHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhccc-CCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhH
Q 010692 368 ISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV-KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNW 446 (503)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~ 446 (503)
+..+.....++.+.+++.-.+.+.+.+...+.....+.+.+ |+++|+++.|+....... |..++|.+.|++.+..+ |
T Consensus 83 ~~~~~~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~-g~~~gp~lgg~l~~~~g-w 160 (495)
T PRK14995 83 LASLAAAFSPTASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSG-GAAFGPLVGGILLEHFY-W 160 (495)
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhhccCC-h
Confidence 66666666677777777777777777766666666666665 568999999999887777 99999999999999876 8
Q ss_pred HHHHHHHHHHHHHHHH
Q 010692 447 RKTTLALTSIFFLAAG 462 (503)
Q Consensus 447 ~~~~~~~~~~~~~~~~ 462 (503)
++.|++...+.++..+
T Consensus 161 r~~f~i~~~~~~~~~~ 176 (495)
T PRK14995 161 GSVFLINVPIVLVVMG 176 (495)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888877655544433
No 197
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.13 E-value=5.5e-08 Score=91.77 Aligned_cols=330 Identities=13% Similarity=0.107 Sum_probs=180.5
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------h-------HHHHHHHHHHHHHhhh
Q 010692 76 GVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------F-------DFWSIAICRMLVGVGE 140 (503)
Q Consensus 76 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~-------~~~~l~~~r~l~G~g~ 140 (503)
+...-.-.+...+.++..|.+.||..|.+++..+++.--++..+.+.. + -++.+++.-.+.|.-.
T Consensus 41 siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~ 120 (432)
T PF06963_consen 41 SIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIE 120 (432)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHH
Confidence 344445556667788888999999999998877766544333332211 1 1222233333333222
Q ss_pred h-hhhhchhhhhhccC------CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 141 A-SFISLAAPFIDDNA------PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 141 ~-~~~~~~~~~i~~~~------~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
- .......++=.||. +++.+.+..+...-.=.+.-+++|++.|.+....+.+....+.++..++..++-+++.
T Consensus 121 ~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~l 200 (432)
T PF06963_consen 121 RLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFLL 200 (432)
T ss_pred HHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 12223333445553 3344566777777777788999999999999888999888888888888877776665
Q ss_pred ccccCCC---CcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHH
Q 010692 214 PLQLKGF---APAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVV 290 (503)
Q Consensus 214 p~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (503)
..-.+.. ..+++.+..+ . +.+ ++ +..+.+......+...+..+....+++..++++.+..
T Consensus 201 ~~VY~~~P~L~~~~~~~~~~---------~-~~~----~~---~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vfla 263 (432)
T PF06963_consen 201 ARVYNSVPALAVKKRSSESE---------S-SSD----EE---SSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLA 263 (432)
T ss_pred HHHHHhChHhcCCCCCcccc---------c-ccc----cc---ccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHH
Confidence 2211110 0000000000 0 000 00 0000001111111112233444466777788887776
Q ss_pred HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692 291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
.....+++.. .-++...+..|+... |.++... .+-+...+.++.|.++..++.+|+|..+..... +..-..+...
T Consensus 264 s~alalLY~T-VLsf~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~--l~~q~~~L~~ 339 (432)
T PF06963_consen 264 SFALALLYFT-VLSFGGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWS--LWWQWVCLAL 339 (432)
T ss_pred HHHHHHHHHH-HhcCcHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHH--HHHHHHHHHH
Confidence 5554444444 444566666788776 7776544 333666778888999999999999976332111 1111111112
Q ss_pred HHHHHHh-hh------HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 370 CLTAFCL-SS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 370 ~~~~~~~-~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
+...... .+ ...++...++.-++.-..=-....+++|.+|+++||...|.-+...+.
T Consensus 340 ~v~~~~~~~~~~~~~s~~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~l 403 (432)
T PF06963_consen 340 CVVSFWAPGSPFSSISAYLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSL 403 (432)
T ss_pred HHHHHhcCCCCchhhHHHHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHH
Confidence 2212221 21 122222222222333233335667788899999999999999887777
No 198
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.13 E-value=1.8e-10 Score=106.94 Aligned_cols=147 Identities=13% Similarity=0.148 Sum_probs=131.2
Q ss_pred CCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchh
Q 010692 69 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAA 148 (503)
Q Consensus 69 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~ 148 (503)
+.++...|.+.+...+.-++.-.+..++.+|+|.|+.++++..+.++=.+++++++|.+.+.+.+.+.|+-.+.......
T Consensus 255 ~~g~~~~G~l~s~~v~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~lva~f 334 (412)
T PF01306_consen 255 GQGNQMYGYLWSVQVFLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLLLVAAF 334 (412)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccChhHHhHHHHHHHHHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCCCCCchhHHHH-HHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692 149 PFIDDNAPVPQKTAWLSM-FYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPL 215 (503)
Q Consensus 149 ~~i~~~~~~~~r~~~~~~-~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 215 (503)
.|+++.+|++..++...+ .+.+.++|..+.+.++|.+.++.|.+..|++.+.+.++..++..+.+++
T Consensus 335 kYI~~~fd~rlsAt~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~ 402 (412)
T PF01306_consen 335 KYITAHFDKRLSATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKK 402 (412)
T ss_dssp HHHHHHS-GGGHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHhCCHhHHHHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecC
Confidence 999999999887777777 4789999999999999999999999999999999988888888888754
No 199
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.13 E-value=4.5e-10 Score=111.29 Aligned_cols=164 Identities=14% Similarity=0.093 Sum_probs=123.4
Q ss_pred HHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHH
Q 010692 291 NVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
..+..+.............|.+.++ ++.+.... .......++..++.++.|++.||+||| +.+..+.++..+.
T Consensus 7 ~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r-----~~~~~~~~~~~~~ 80 (485)
T TIGR00711 7 LMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTR-----RLFLISTFAFTLG 80 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcH-----HHHHHHHHHHHHH
Confidence 3344444445555566667776655 66665443 555777888999999999999999998 6776666666666
Q ss_pred HHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHH
Q 010692 370 CLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKT 449 (503)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~ 449 (503)
.+.....++.+..++..++.+++.+...+....++.+.+|+++|+++.++....... |..++|.+.|++.+..+ |+..
T Consensus 81 ~~~~~~~~~~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-g~~~g~~~~~~l~~~~~-w~~~ 158 (485)
T TIGR00711 81 SLLCGVAPNLELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRGRAMAIWGLTVLV-APALGPTLGGWIIENYH-WRWI 158 (485)
T ss_pred HHHHhCcCCHHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HhhhhhccHhHhccCcC-ceeh
Confidence 666666677777777777788877777888888999999999999999999877777 88999999999998776 7778
Q ss_pred HHHHHHHHHHHHH
Q 010692 450 TLALTSIFFLAAG 462 (503)
Q Consensus 450 ~~~~~~~~~~~~~ 462 (503)
|++.+.+.++..+
T Consensus 159 f~~~~~~~~~~~~ 171 (485)
T TIGR00711 159 FLINVPIGIIVVV 171 (485)
T ss_pred hhhhhHHHHHHHH
Confidence 8776655544443
No 200
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.13 E-value=2.3e-07 Score=88.63 Aligned_cols=252 Identities=13% Similarity=0.055 Sum_probs=152.8
Q ss_pred cccccccCCC-----ccchhhHHHHHHHHHHHH-HhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh----h-------
Q 010692 62 TPKRGDFKLN-----NFQDGVLSSAFMVGLLVA-SPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----F------- 124 (503)
Q Consensus 62 ~~i~~~~~~s-----~~~~g~~~s~~~~~~~~~-~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~------- 124 (503)
.+++|.+.++ .+.+.++-+...+..++. .++.+++++|++|++++-+....+....+++++. +
T Consensus 27 R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~~ 106 (472)
T TIGR00769 27 RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPTA 106 (472)
T ss_pred HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCcH
Confidence 6667777663 356788888887777776 8999999999999999888887777777776654 1
Q ss_pred --------------------HHHHHHHHHHHHHhhhhhhhh-chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHH
Q 010692 125 --------------------DFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGG 183 (503)
Q Consensus 125 --------------------~~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~ 183 (503)
+.|..-+.-+...+-...... .-..+.+|.++.+|-.|..+++..+.++|.++++.+..
T Consensus 107 ~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~ 186 (472)
T TIGR00769 107 LADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIK 186 (472)
T ss_pred HHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 123333344444444444444 67789999999999999999999999999999999988
Q ss_pred hhcC--------cchhH----HHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCcccccc
Q 010692 184 VVGS--------HLNWR----YAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDI 251 (503)
Q Consensus 184 ~l~~--------~~gwr----~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (503)
++.+ ...|. ..+.+.++...+ .+.+.+.+.+.... +++..+ . +
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~-~~~~~~~l~~~~~~--~~~~~~-~-------------------~-- 241 (472)
T TIGR00769 187 YFSKLRASLGPGVDGWHVSLKNLMVIVICSGLA-IILLYWWVNRNVLT--DPRSYN-P-------------------A-- 241 (472)
T ss_pred HHHHhhhccccccChHHHHHHHHHHHHHHHHHH-HHHHHHHHHhcccC--Cccccc-h-------------------h--
Confidence 8762 12342 233333333332 33333333211100 000000 0 0
Q ss_pred chhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhh--H---HH
Q 010692 252 SDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNAD--M---MF 326 (503)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~ 326 (503)
. .++++ ++..+..++++.++++|.++.+.+...+++...+.+..-.-....+.+ .++.+ . .+
T Consensus 242 ---~--~~~k~-------k~k~~~~es~k~i~~S~yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~-p~~~~~~~f~g~~ 308 (472)
T TIGR00769 242 ---L--KEKKV-------KPKMSTMESLKFLVSSPYILDLALLVIAYGISINLVEVTWKSKLKAQY-PSPNEYSAFMGDF 308 (472)
T ss_pred ---h--ccccC-------CCCCCHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHH
Confidence 0 00000 111234577889999999888888777776665555443333334433 23211 1 22
Q ss_pred HHhhhhhhhhchhhhhhhhhccccc
Q 010692 327 GGVTIVCGIVGTISGGFILDQMGAT 351 (503)
Q Consensus 327 ~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (503)
....++..++..++.+++.+|+|-+
T Consensus 309 ~~~~gi~tl~~~l~~~~l~~~~Gw~ 333 (472)
T TIGR00769 309 STWTGVVSVTMMLLSGNVIRKYGWL 333 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHH
Confidence 3334445555566668888888876
No 201
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.12 E-value=1.9e-09 Score=102.80 Aligned_cols=147 Identities=10% Similarity=0.033 Sum_probs=101.9
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAAT 363 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~ 363 (503)
+|.++...+.....+...+......+.+-+..+++++.+. .+.+++.+...+.++..|++.||+|.| ++...+.
T Consensus 33 ~r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R-----~v~~~~~ 107 (462)
T PRK15034 33 RRNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGR-----RWTVFST 107 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCh-----HHHHHHH
Confidence 3566666665555555555555555555555688887666 455777888888899999999999998 6666666
Q ss_pred HHHHHHHHHHHHh-----hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHH
Q 010692 364 FLGAISCLTAFCL-----SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGV 438 (503)
Q Consensus 364 ~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~ 438 (503)
++..+..+..... ++.+.+++.-++.+++ +..+++....+.+.+|+++||++.|+.....+. |..+++++.+.
T Consensus 108 ll~~i~~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~-G~~l~~~l~p~ 185 (462)
T PRK15034 108 AILIIPCVWLGIAVQNPNTPFGIFIVIALLCGFA-GANFASSMGNISFFFPKAKQGSALGINGGLGNL-GVSVMQLVAPL 185 (462)
T ss_pred HHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhh-HHHHHHHHHHH
Confidence 6555555544443 4666666666777665 567778888888889999999999999655555 66555554444
No 202
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.11 E-value=1.1e-09 Score=103.71 Aligned_cols=151 Identities=17% Similarity=0.149 Sum_probs=125.1
Q ss_pred ccccC-CCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-hHHHHHH----HHHHHHHh
Q 010692 65 RGDFK-LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIA----ICRMLVGV 138 (503)
Q Consensus 65 ~~~~~-~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~----~~r~l~G~ 138 (503)
-+|.| .+....+.+.++..++-.+.-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+... +...++|+
T Consensus 234 l~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~ 313 (400)
T PF03825_consen 234 LQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGL 313 (400)
T ss_pred HHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhH
Confidence 47777 677778888888889999999999999999999999999999999998888887 5544433 34567999
Q ss_pred hhhhhhhchhhhhhccCCCCCchhHHHHHHh-HHhHHHHHHHHHHHhhcCcch------hHHHHHHHHHHHHHHHHHHHh
Q 010692 139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLN------WRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~g------wr~~f~~~~~~~~~~~~~~~~ 211 (503)
..+........++.+..|++.|+++.++++. ..++|..+|..++|++.+++| |...+.+.+++.++..++.++
T Consensus 314 tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~ 393 (400)
T PF03825_consen 314 TFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVI 393 (400)
T ss_pred HHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999876 478999999999999998765 556667777766666666655
Q ss_pred cccc
Q 010692 212 IKPL 215 (503)
Q Consensus 212 ~~p~ 215 (503)
+.+|
T Consensus 394 ~fk~ 397 (400)
T PF03825_consen 394 LFKP 397 (400)
T ss_pred hccC
Confidence 5533
No 203
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.11 E-value=2.4e-10 Score=103.87 Aligned_cols=143 Identities=14% Similarity=0.099 Sum_probs=126.6
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
..++|++..++.++.-.-.+..+++++++|+|.||+|.|+++..++++..+.++..-+...-..+.++-.+.|...|..+
T Consensus 280 ~~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~q 359 (438)
T COG2270 280 AADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQ 359 (438)
T ss_pred HHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHH
Confidence 45899999999999999999999999999999999999999999999999998888888777778888899999999999
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHH
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAV 207 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~ 207 (503)
..+.++..+..|+++-++.+|+++...-.+..+||.+-+.+.+..| -|..+....++.++..+
T Consensus 360 A~SRSy~~~lvp~~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~ 423 (438)
T COG2270 360 ASSRSYLARLVPKGKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLL 423 (438)
T ss_pred HHHHHHHHHhCCCccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHh
Confidence 9999999999999999999999999999999999999998886544 66666666555433333
No 204
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.10 E-value=4.5e-10 Score=103.22 Aligned_cols=131 Identities=11% Similarity=0.046 Sum_probs=108.8
Q ss_pred ccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhc
Q 010692 67 DFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISL 146 (503)
Q Consensus 67 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~ 146 (503)
.+|.++++.++..+.+..++.++.+..+++.||+|+|+++.++..+..++.++....++...+ .+-++.|++.+..+|.
T Consensus 172 ~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~ 250 (310)
T TIGR01272 172 ALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPT 250 (310)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHH
Confidence 478999999999999999999999999999999999999988888888877666655544333 3555889999999999
Q ss_pred hhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHH
Q 010692 147 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAI 200 (503)
Q Consensus 147 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~ 200 (503)
..+...+..|++ .+.+.++. ....+|.+++|++.|.+.+..|.+..|++..+
T Consensus 251 ~~s~a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~ 302 (310)
T TIGR01272 251 IFSLALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVP 302 (310)
T ss_pred HHHHHHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHH
Confidence 999998888764 56666775 45668999999999999998899998885543
No 205
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.10 E-value=3.7e-10 Score=123.91 Aligned_cols=145 Identities=18% Similarity=0.131 Sum_probs=125.0
Q ss_pred ccccCCCcc-chhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhh
Q 010692 65 RGDFKLNNF-QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 65 ~~~~~~s~~-~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~ 143 (503)
.+++|.+.. +.+++.+...++..++++++|++.||+++|+++.++.++.+++.++..+..+.+.++++.++.|++.+..
T Consensus 260 ~~~~g~s~~~~~g~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 339 (1146)
T PRK08633 260 KEVLGLDNTFQVQYLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLF 339 (1146)
T ss_pred HHHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHh
Confidence 567899988 9999999999999999999999999999999999999999888888888889999999999999999998
Q ss_pred hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-cchhHHHHHHHHHHHHHHHHHH
Q 010692 144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HLNWRYAFWGEAILMLPFAVLA 209 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~gwr~~f~~~~~~~~~~~~~~ 209 (503)
.+...+++.+..|+++||+++++.+....+|.++++.+++.+.. .+++...|++.+.+.++..+..
T Consensus 340 ~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 406 (1146)
T PRK08633 340 IVPLNALIQFRAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLIGTLYT 406 (1146)
T ss_pred hHHHHHHHhhcCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 88899999999999999999999999999999888888876653 2356667776666554444333
No 206
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.09 E-value=1.5e-09 Score=102.51 Aligned_cols=151 Identities=10% Similarity=-0.020 Sum_probs=104.6
Q ss_pred hhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHH
Q 010692 304 AYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGF 382 (503)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (503)
.+...+|.+.++ ++.++.+. .+.+...++..++.+..|++.||+||| +.+..................+.+.+
T Consensus 9 ~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~~l 82 (368)
T TIGR00903 9 TFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKR-----WFLFGSLATFAAAAGRLLDPFNYEWL 82 (368)
T ss_pred HHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccch-----HHHHHHHHHHHHHHHHHHHhccHHHH
Confidence 344556655544 67776655 555677888899999999999999987 55544443333332222222455566
Q ss_pred HHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 010692 383 LALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 462 (503)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 462 (503)
+..-++.+.+.+. ..+......+.+|+++|+++.++.+....+ |..+++.+.+++.+..| |+..|.+.+++.++..+
T Consensus 83 ~~~R~l~G~g~~~-~~~~~~~~~~~~~~~~r~~a~~~~~~~~~l-G~~l~~~~~~~l~~~~g-Wr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 83 LACQLLAALGQPF-LLNAFAPAASQIREERRDLVISLLSFAMYL-GIIFALAAGLKIYTAGG-LQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHHhHhHH-HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHH
Confidence 6666666666654 344555568889999999999999877777 99999999999988766 99888887666555444
Q ss_pred H
Q 010692 463 I 463 (503)
Q Consensus 463 ~ 463 (503)
+
T Consensus 160 ~ 160 (368)
T TIGR00903 160 L 160 (368)
T ss_pred H
Confidence 3
No 207
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.08 E-value=6.9e-10 Score=107.85 Aligned_cols=146 Identities=8% Similarity=-0.014 Sum_probs=96.3
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh--h--hhHHHHHHHHHHHHHhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG--S--SFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~--~--~~~~~~l~~~r~l~G~g~ 140 (503)
.+++|.+..+.++..++..++..+++++.|+++||+|||+.+.++.++.++..+... . .++.+..+..-.+.+.+.
T Consensus 271 ~~~~g~s~~~~~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 350 (432)
T PRK10406 271 VNTAGMHANVASGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIV 350 (432)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHH
Confidence 566888888999999988888899999999999999999988776665443332211 1 123332222222233333
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhH-HHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHh
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPT-GVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~-G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~ 211 (503)
+...+....++.|++|++.|+.++|+.+...++ .....|.+.+.+.. .| |...++..++..++..+..++
T Consensus 351 ~~~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l~~-~g~~~~~~~~~~~~~~i~~~~~~~ 422 (432)
T PRK10406 351 SFYTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSLKS-IGMETAFFWYVTLMAVVAFLVSLM 422 (432)
T ss_pred HHHHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHHHH-hCCCcHHHHHHHHHHHHHHHHHHH
Confidence 344455668899999999999999998866554 33447777776543 34 555666665555555554443
No 208
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.08 E-value=1.3e-09 Score=104.08 Aligned_cols=151 Identities=16% Similarity=0.157 Sum_probs=113.5
Q ss_pred hhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Q 010692 305 YSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFL 383 (503)
Q Consensus 305 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (503)
....+|.+.++ ++.++... ...+...++..++.++.|++.||+||| +.+..+.++..+........++.+...
T Consensus 10 ~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~i~~~~~~~~~~~~~~~ 83 (377)
T PRK11102 10 YLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRK-----PVILGGTLVFALAAVACALAQTIDQLI 83 (377)
T ss_pred HhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCCh-----HHHHHHHHHHHHHHHHHHHHccHHHHH
Confidence 34555666655 67776554 455677788899999999999999998 677666666666665555556666666
Q ss_pred HHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692 384 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 463 (503)
...++.+++.+...+....++.+..|+++|+++.++.+..... |..++|.+.+.+.+..+ |+..+++.+.+.++..+.
T Consensus 84 ~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 84 YMRFLHGLAAAAASVVINALMRDMFPKEEFSRMMSFVTLVMTI-APLLAPIIGGWLLVWFS-WHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcC-hHHHHHHHHHHHHHHHHH
Confidence 6777777777777777888888988889999999999877777 88889999999988776 777777766655444333
No 209
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.08 E-value=3.3e-09 Score=101.94 Aligned_cols=151 Identities=11% Similarity=0.034 Sum_probs=103.6
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHH
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLY 380 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (503)
.......+|.+. +.++.++... ...+...++..++.++.|+++||+||| +.+..+.....+..+.....++.+
T Consensus 24 ~~~~~p~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr-----~~~~~~~~~~~~~~~~~~~~~~~~ 97 (394)
T PRK11652 24 QTIYVPAIADMA-RDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRR-----PVILVGMSIFILGTLVALFAHSLT 97 (394)
T ss_pred HHHHhccHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCCh-----HHHHHHHHHHHHHHHHHHHHccHH
Confidence 333344455555 4467776554 455677788899999999999999998 666655555555544444455566
Q ss_pred HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHH
Q 010692 381 GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLA 460 (503)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 460 (503)
...+..++.+++.+...+.......+..++++++.+.+..+..... +..++|.+.+.+.+..| |+..+.+.++..++.
T Consensus 98 ~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~i~~~l~~~~g-~~~~f~~~~~~~~~~ 175 (394)
T PRK11652 98 VLIAASAIQGLGTGVGGVMARTLPRDLYEGTQLRHANSLLNMGILV-SPLLAPLIGGLLTTLFG-WRACYLFLLLLGAGV 175 (394)
T ss_pred HHHHHHHHHHhhhhHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhccC-hHHHHHHHHHHHHHH
Confidence 5555556666655544455555666777778899999988766666 88889999999888766 888887766554433
No 210
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.08 E-value=4.5e-10 Score=102.06 Aligned_cols=144 Identities=17% Similarity=0.052 Sum_probs=119.0
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh-------HHHH----HHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF-------DFWS----IAICR 133 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~----l~~~r 133 (503)
+++|+.++.+.|...+.+.+...+..+.+|+++||+|.+|++.+....++++..+..... +... ++...
T Consensus 246 ~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~GG~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~ 325 (417)
T COG2223 246 VTQFGLSPVTAGLIAFLFPLIGALARPLGGWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALF 325 (417)
T ss_pred HHhcCCChhhHHHHHHHHHHHHHHHHhccchhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHH
Confidence 788999999999999999999999999999999999999999999988888888777653 3333 44455
Q ss_pred HHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhc
Q 010692 134 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 134 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~ 212 (503)
+..|+|.| ....++..++|+ +-|.+.|+.....++|...-|..-+...+..| +...|++.....++..++.+..
T Consensus 326 ~~~G~GnG----svfk~Ip~if~~-~~G~v~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~ 400 (417)
T COG2223 326 VFAGLGNG----SVFKMIPVIFPK-ETGAVTGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWAL 400 (417)
T ss_pred HHhccCcc----hheeechHHHHh-hhhHHHHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHH
Confidence 55566555 566778888776 58999999999999999888888887776666 9999999998888887776665
Q ss_pred c
Q 010692 213 K 213 (503)
Q Consensus 213 ~ 213 (503)
.
T Consensus 401 y 401 (417)
T COG2223 401 Y 401 (417)
T ss_pred H
Confidence 5
No 211
>TIGR00898 2A0119 cation transport protein.
Probab=99.05 E-value=1.9e-09 Score=107.26 Aligned_cols=138 Identities=12% Similarity=-0.101 Sum_probs=110.8
Q ss_pred hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHH--HHHHHHHHHHHhhhhhhhhchhhhhhcc
Q 010692 77 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDF--WSIAICRMLVGVGEASFISLAAPFIDDN 154 (503)
Q Consensus 77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~--~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 154 (503)
+......+...++.++.+++.||+|||+.+.++.++.+++.++..+.++. +..++.-++.+++.+...+....+..|.
T Consensus 359 ~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 438 (505)
T TIGR00898 359 LDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGKFGITSAFQMVYLYTAEL 438 (505)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 33445567778889999999999999999999999999888887776543 4555566677777777788888999999
Q ss_pred CCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 155 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 155 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
+|++.|+.++|+.+....+|.+++|.+.+ +. ..++..++++.++..++..++.+ ++||+.
T Consensus 439 ~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~lpet~ 498 (505)
T TIGR00898 439 YPTVVRNLGVGVCSTMARVGSIISPFLVY-LG-EKWLFLPLVLFGGLALLAGILTL-FLPETK 498 (505)
T ss_pred ccHHHHhhhHhHHHHHHHHHHHHHhHHHH-HH-HHHHhhHHHHHHHHHHHHHHHHH-cCcCCC
Confidence 99999999999999999999999999988 43 45677888888877777666554 446643
No 212
>KOG2615 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=99.05 E-value=1.3e-09 Score=97.13 Aligned_cols=143 Identities=15% Similarity=0.142 Sum_probs=101.1
Q ss_pred hHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhH
Q 010692 323 DMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNY 402 (503)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (503)
+..+.+.+.++..+.++..|.++||+||| ..+..+....++..++.....+. ..++..=+.+.......+...+
T Consensus 70 aGflGSsF~ilQ~~sS~~~G~~SD~yGRk-----pvll~c~~~va~s~ll~~~S~~F-~afv~aR~l~Gi~kgnl~v~rA 143 (451)
T KOG2615|consen 70 AGFLGSSFSILQFISSPLWGCLSDRYGRK-----PVLLACLIGVALSYLLWALSRNF-AAFVLARFLGGIFKGNLSVIRA 143 (451)
T ss_pred hhhHhhHHHHHHHHhhhhhhhhhhhhCch-----HHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHhhhhccCchHHHHH
Confidence 34667788899999999999999999999 77777777666666666655665 3333322333344466778899
Q ss_pred HhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh---hhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010692 403 VCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD---HVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 472 (503)
Q Consensus 403 ~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (503)
++.|.+++++|+.+++.+++..++ |.++||.++|++.. ..|.|..++-.+.++.....-++++..++++
T Consensus 144 iisdV~sek~r~l~ms~v~~a~~l-GfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpE 215 (451)
T KOG2615|consen 144 IISDVVSEKYRPLGMSLVGTAFGL-GFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPE 215 (451)
T ss_pred HHHhhcChhhccceeeeeehhhhc-chhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 999999999999999999988888 99999999999987 5565533333333333333323444444553
No 213
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.04 E-value=7.5e-10 Score=121.06 Aligned_cols=146 Identities=12% Similarity=0.085 Sum_probs=121.4
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------------------h
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------------------F 124 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------------------~ 124 (503)
.+.+|.+..+.|++.+.+.++.++++++.|+++|+.++++.+..+.++.+++.+..++. +
T Consensus 253 ~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 332 (1140)
T PRK06814 253 KETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRITLLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKR 332 (1140)
T ss_pred HHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCceeeeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhccc
Confidence 45689999999999999999999999999999999888777777766666666544443 6
Q ss_pred HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHH
Q 010692 125 DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILML 203 (503)
Q Consensus 125 ~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~ 203 (503)
+.+.++++.++.|++.+...+...+++.+.+|+++||+++|..+....+|..+++++++.+. ...++...+++.+++.+
T Consensus 333 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~ 412 (1140)
T PRK06814 333 HGWRILIDLFGLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANL 412 (1140)
T ss_pred ccHHHHHHHHHHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 77888889999999999999999999999999999999999999999999999999998886 34567777776666555
Q ss_pred HHHHHHH
Q 010692 204 PFAVLAF 210 (503)
Q Consensus 204 ~~~~~~~ 210 (503)
+..+..+
T Consensus 413 ~~~~~~~ 419 (1140)
T PRK06814 413 IVAILIL 419 (1140)
T ss_pred HHHHHHH
Confidence 5444433
No 214
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=99.04 E-value=5.6e-09 Score=91.77 Aligned_cols=356 Identities=10% Similarity=-0.036 Sum_probs=221.6
Q ss_pred chhHHHHHHhhhcccCCCCCcccccccc-cccCCCccchh-hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHH
Q 010692 38 PPLAEAEMATRSLSEDSPPTPSWFTPKR-GDFKLNNFQDG-VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTF 115 (503)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~g-~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~ 115 (503)
++|...++.- ..+.-|.+.|-+. .+-|++..|+. -+.-...-.+.+.-.+.=.+.|..-.|++++.-.+....
T Consensus 10 llC~yG~~~e-----~RPseP~~tpyl~gp~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~ 84 (433)
T KOG3810|consen 10 LLCLYGFVRE-----FRPSEPYLTPYLLGPDKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVP 84 (433)
T ss_pred hhhhhhHHHH-----hCCCCCccchhccCCCCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhH
Confidence 3444444442 3344444433333 56677766653 344555666777777888889999999999888888888
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcc--hhHH
Q 010692 116 ATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHL--NWRY 193 (503)
Q Consensus 116 ~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~--gwr~ 193 (503)
...+.-+.++.+.+=+.-+..|...+ ...+.++++-+..+++++.++.+....+.-.|-.+|..++-.+.... ++..
T Consensus 85 ~w~~lv~g~sV~~mQvlE~FyG~~tA-aEIAYysYIYs~Vd~~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~ 163 (433)
T KOG3810|consen 85 VWIMLVFGPSVKAMQVLEFFYGPATA-AEIAYYSYIYSKVDPEMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTT 163 (433)
T ss_pred HHHHHHhcCCchheeeehhhcChHHH-HHHhhhheeeeecCHHHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhh
Confidence 88888999999999999999999887 55678899999999999999999999999999999999998887532 3344
Q ss_pred HHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhh
Q 010692 194 AFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLS 273 (503)
Q Consensus 194 ~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (503)
.-.+.-....+..++ .+++|..++..--...+++. ...+. ++... +.+..........
T Consensus 164 LN~ISL~~~~ia~~~-A~fLP~v~rSl~f~~~~~~~-------~v~~~-------e~~~~-------~~~~~~~l~~~~~ 221 (433)
T KOG3810|consen 164 LNYISLAEVTIAVLL-ALFLPRVKRSLYFHRLEDKI-------SVGDL-------EEMNP-------QASYMSYLRGAFV 221 (433)
T ss_pred hchhhHHHHHHHHHH-HhhCCCCchhhhhhcccccc-------eeccc-------hhcCc-------cchhhHHHHHHHH
Confidence 444433332333333 33334321110000000000 00000 00000 0000000112334
Q ss_pred chHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH---HHHHhhhhhhhhchhhhhhhhhcccc
Q 010692 274 QFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM---MFGGVTIVCGIVGTISGGFILDQMGA 350 (503)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~d~~~~ 350 (503)
..++++++..+||.+....+.+.+...+++...++....-.+.. .++... ..=++..+.++++.+..|.+--...|
T Consensus 222 ~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~-~~~~~vyNG~veAv~tlLGa~~~~~~g~l~i~w~r 300 (433)
T KOG3810|consen 222 LLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVA-PNPANVYNGAVEAVSTLLGAIAALAAGYLNINWNR 300 (433)
T ss_pred HHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhC-CCchhhhcCHHHHHHHHHHHHHHHHHHheeeccch
Confidence 45567888889999988888888877777777777665554432 222111 12234445566777777877655544
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHh
Q 010692 351 TISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIH 425 (503)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 425 (503)
+.. .++.++....++..+.+....+.|...+...+.........+.....++.....+.-|...|+.....-
T Consensus 301 ~g~---~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~nL~~e~~gLvFGiNTFvAl 372 (433)
T KOG3810|consen 301 WGD---LLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIARNLSSELFGLVFGINTFVAL 372 (433)
T ss_pred hhH---HHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHHhhhhhhheeeeehHHHHHH
Confidence 321 344444555555555555566777777777777777777777777777888888888888888754433
No 215
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=99.03 E-value=3.3e-08 Score=98.90 Aligned_cols=149 Identities=17% Similarity=0.146 Sum_probs=123.3
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhh--------HHHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSF--------DFWSIAICRML 135 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~--------~~~~l~~~r~l 135 (503)
.+.+|.+.++...+...+....-+..+++|+++|++ |+++.+.++.++..+|.++.+++. .....+++-.+
T Consensus 15 ~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gLaL 94 (654)
T TIGR00926 15 LNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGLAL 94 (654)
T ss_pred HHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHHHH
Confidence 456788888888889999999999999999999976 999999999999999998887642 12346677888
Q ss_pred HHhhhhhhhhchhhhhhccCCCCC---chhHHHHHHhHHhHHHHHHHHHHHhhcCc-------chhHHHHHHHHHHHHHH
Q 010692 136 VGVGEASFISLAAPFIDDNAPVPQ---KTAWLSMFYMCIPTGVALGYVYGGVVGSH-------LNWRYAFWGEAILMLPF 205 (503)
Q Consensus 136 ~G~g~~~~~~~~~~~i~~~~~~~~---r~~~~~~~~~~~~~G~~~g~~l~~~l~~~-------~gwr~~f~~~~~~~~~~ 205 (503)
.++|.|++-|...+...|-+++++ |-..+.++..+.++|..+++++.+++.+. .+|...|.+.++..++.
T Consensus 95 ia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ia 174 (654)
T TIGR00926 95 IALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMILA 174 (654)
T ss_pred HHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHHHH
Confidence 889999999999999999997643 66788899999999999999999888633 36999999999887777
Q ss_pred HHHHHhcc
Q 010692 206 AVLAFVIK 213 (503)
Q Consensus 206 ~~~~~~~~ 213 (503)
.++.....
T Consensus 175 ~lvf~~g~ 182 (654)
T TIGR00926 175 LIVFMAGS 182 (654)
T ss_pred HHHHHHhc
Confidence 66655443
No 216
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.03 E-value=1.9e-09 Score=105.98 Aligned_cols=147 Identities=14% Similarity=0.021 Sum_probs=102.0
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhH--------HHHHHHH--HHHHHHhhh-hhHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLI--------GVGLSVW--TFATAGCGS-SFDFWSIAICR 133 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l--------~~~~~~~--~~~~~~~~~-~~~~~~l~~~r 133 (503)
.+++|.+..+.+++.++..++..++.++.|+++||+++|+.. ..+.... ++..+.... ..+.+..+++-
T Consensus 289 ~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (465)
T TIGR00894 289 SWVLRVSGKENGLLSSLPYLFAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIIL 368 (465)
T ss_pred HHHhCcChHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHH
Confidence 567899999999999999999999999999999998755321 1111111 111111111 23344444444
Q ss_pred HHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc---chhHHHHHHHHHHHHHHHHHHH
Q 010692 134 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH---LNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 134 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~---~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
.+.+.+.+...+.......|..|+ .+|.++++.+....+|..++|.+.+.+.+. .+|+..|++.++..++..++..
T Consensus 369 ~l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~ 447 (465)
T TIGR00894 369 TLANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYL 447 (465)
T ss_pred HHHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHee
Confidence 555555554555555556677765 799999999999999999999999988764 3499999999887777666554
Q ss_pred hc
Q 010692 211 VI 212 (503)
Q Consensus 211 ~~ 212 (503)
+.
T Consensus 448 ~~ 449 (465)
T TIGR00894 448 IF 449 (465)
T ss_pred ee
Confidence 44
No 217
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.02 E-value=7.5e-09 Score=99.74 Aligned_cols=142 Identities=12% Similarity=0.097 Sum_probs=103.3
Q ss_pred hhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 010692 314 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 392 (503)
Q Consensus 314 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (503)
.+.++.+.... ...+++.++..++.++.|+++||+||| +.+..+.++..+..+.....++.+.+++.-++.+.+
T Consensus 43 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr-----~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~Gi~ 117 (413)
T PRK15403 43 VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRR-----PVLITGALIFTLACAATLFTTSMTQFLIARFIQGTS 117 (413)
T ss_pred HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCch-----HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 34566665444 445677788899999999999999999 666666666655555555566666666666666666
Q ss_pred HhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 010692 393 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 462 (503)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 462 (503)
.+...+.......+.+++++++++.++.+....+ |..++|.+++.+.+..| |+..|++.++..++..+
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~lg~~l~~~~g-w~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 118 ICFIATVGYVTVQEAFGQTKGIKLMAIITSIVLV-APIIGPLSGAALMHFVH-WKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHH
Confidence 5544444556667778888899999999888777 88889989988887765 88888887766555443
No 218
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.02 E-value=1.1e-08 Score=95.91 Aligned_cols=130 Identities=13% Similarity=0.038 Sum_probs=106.2
Q ss_pred ccchhhhhcccchhh-H-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHH
Q 010692 309 GPKAGYNIYHMSNAD-M-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALF 386 (503)
Q Consensus 309 ~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (503)
...++.+.+|+++.+ . .+......+..+..+.+|++.||+|.| +++....+...+..++.....+...+.+.-
T Consensus 48 a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K-----~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R 122 (511)
T TIGR00806 48 ITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYK-----PVLVLQALSFVCVWLLLLLGTSVWHMQLME 122 (511)
T ss_pred HHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333666678888766 3 556777889999999999999999999 777777777777777777777778888888
Q ss_pred HHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHH
Q 010692 387 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWR 447 (503)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~ 447 (503)
++.|.+.+..+ ....++.+-+|+++|+++.|+.+....+ |.++++++.+++. ..| |+
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~v-G~~Ia~~L~qll~-s~g-Wr 179 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLL-GVFLSSVLGQLLV-TLG-WI 179 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH-hcC-ch
Confidence 88888888888 8889999999999999999999988888 9999999998844 444 44
No 219
>KOG4686 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.5e-09 Score=91.29 Aligned_cols=172 Identities=15% Similarity=0.073 Sum_probs=121.7
Q ss_pred cccCCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHH
Q 010692 33 LSHRPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSV 112 (503)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~ 112 (503)
++.+..+|.+....-+ -.....+.++ ++.||+|+...+.+.+....-.++.+++.|.++||+|++...+.+..+
T Consensus 266 fw~~~iicv~yyva~f---PFi~lg~~fF---~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~ 339 (459)
T KOG4686|consen 266 FWVLVIICVLYYVAWF---PFITLGPMFF---QKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACI 339 (459)
T ss_pred HHHHHHHHHHHHHHHH---HHhhhhHHHH---HHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHH
Confidence 3444455555554433 1222223333 799999999999999999999999999999999999999877666554
Q ss_pred HHHH-HHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-
Q 010692 113 WTFA-TAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN- 190 (503)
Q Consensus 113 ~~~~-~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g- 190 (503)
..+. -... .-+++.=+++..+.|+..+.........++...|+++.|.+.+..+...++|..+.|++++.+.+.-|
T Consensus 340 ~tl~~H~~l--~Ft~lsPy~~m~~lGLsysllAcslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~ 417 (459)
T KOG4686|consen 340 LTLLGHSGL--FFTFLSPYTSMTFLGLSYSLLACSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGS 417 (459)
T ss_pred HHHHHhhhH--HhhhccHHHHHHHHhhhHHHHHHHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCc
Confidence 4332 2222 22344445677888888887766677888888999999999999999999999999999999987544
Q ss_pred --hHHHHH-HHHHHHHHHHHHHHhcc
Q 010692 191 --WRYAFW-GEAILMLPFAVLAFVIK 213 (503)
Q Consensus 191 --wr~~f~-~~~~~~~~~~~~~~~~~ 213 (503)
|--.|. +.+.+++... .+++..
T Consensus 418 y~~le~ffl~~~~~aL~sv-gil~~~ 442 (459)
T KOG4686|consen 418 YDNLEAFFLIIGLMALTSV-GILFYL 442 (459)
T ss_pred hhhHHHHHHHHHHHHHHHH-HHHhhe
Confidence 544444 4444444433 334443
No 220
>PRK09848 glucuronide transporter; Provisional
Probab=99.01 E-value=3e-09 Score=104.00 Aligned_cols=124 Identities=10% Similarity=0.041 Sum_probs=101.1
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~ 142 (503)
++.+|.++...++......++..++.++++++.||+|+|+++.++.++.+++.++..+.+ +++.+++..++.|+|.+.
T Consensus 256 ~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~ 335 (448)
T PRK09848 256 RYVLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGV 335 (448)
T ss_pred eeecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHH
Confidence 455676655444545555677888999999999999999999999999888887776643 677777888899999999
Q ss_pred hhhchhhhhhccCCCC-------CchhHHHHHHhHHhHHHHHHHHHHHhhcCc
Q 010692 143 FISLAAPFIDDNAPVP-------QKTAWLSMFYMCIPTGVALGYVYGGVVGSH 188 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~-------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 188 (503)
..+...++..|..+.+ ++|...++.+....+|..+|+.+.+.+.+.
T Consensus 336 ~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~ 388 (448)
T PRK09848 336 TMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGL 388 (448)
T ss_pred HHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888754 358999999999999999999998876543
No 221
>KOG1330 consensus Sugar transporter/spinster transmembrane protein [Carbohydrate transport and metabolism]
Probab=99.01 E-value=2.8e-10 Score=104.33 Aligned_cols=154 Identities=11% Similarity=0.116 Sum_probs=124.5
Q ss_pred hhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Q 010692 314 YNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELL 392 (503)
Q Consensus 314 ~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 392 (503)
++.++.++... .+.....+...++.+++|++.||+.|+ .++..+..+-.+..+........|.+.++=.+.|.+
T Consensus 60 ~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~-----~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 60 QTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRK-----RVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG 134 (493)
T ss_pred HHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcc-----eEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 34456665443 666788889999999999999999998 677666666666666666667888888888888999
Q ss_pred HhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 010692 393 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGIFLKS 472 (503)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 472 (503)
.....+..+.++.+.+|.++|++++++.+..... |..+|-..+..+.+..+.|+++|...+++.++..++.++...-|+
T Consensus 135 eAs~~~ia~s~IaD~f~~~~Rs~~~~ify~~ipv-GsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPDDKRSRVLGIFYFAIPV-GSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhhhcccchhHhhhcCcchhhhHHHHHhhhhccc-ccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 9899999999999999999999999999999998 888888888888888887999999988887777776665443343
Q ss_pred c
Q 010692 473 I 473 (503)
Q Consensus 473 ~ 473 (503)
|
T Consensus 214 r 214 (493)
T KOG1330|consen 214 R 214 (493)
T ss_pred c
Confidence 3
No 222
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.00 E-value=1.7e-09 Score=102.32 Aligned_cols=128 Identities=16% Similarity=0.083 Sum_probs=103.7
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
|.+.++.|.+..+.+.+.+.+.++..+++++.|++.||+ +||+.+..+..+.+++.++..+.++..... .-++.|++.
T Consensus 221 p~~~~~~g~~~~~~g~~~~~~~~~~i~~~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~g~~~ 299 (355)
T TIGR00896 221 PAILISHGASAATAGSLLALMQLAQAASALLIPALARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLWA-WALVLGLGQ 299 (355)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHHH-HHHHHHHhh
Confidence 444567899999999999999999999999999999999 567777788888888877777665433332 456789999
Q ss_pred hhhhhchhhhhhccCC-CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692 141 ASFISLAAPFIDDNAP-VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 190 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 190 (503)
+...+...+.+.+..+ +++++...++.+....+|..++|.+.|.+.++.|
T Consensus 300 g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 300 GGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGVLHDISG 350 (355)
T ss_pred hhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9888887777766554 5667899999999899999999999999987665
No 223
>KOG0569 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.99 E-value=1e-08 Score=97.47 Aligned_cols=156 Identities=11% Similarity=-0.075 Sum_probs=126.8
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh---HHH------HHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF---DFW------SIAIC 132 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~------~l~~~ 132 (503)
..+-++-|++..+..+..........+..+.+..+.||+|||+.++.+..++.+..++..... +.. ..+++
T Consensus 294 t~i~~~aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~ 373 (485)
T KOG0569|consen 294 TSIFKTAGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAA 373 (485)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 555678899999999999999999999999999999999999999999999999888876542 211 12344
Q ss_pred HHHHHhhhhh-hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHh
Q 010692 133 RMLVGVGEAS-FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 133 r~l~G~g~~~-~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~ 211 (503)
.++..++.+. .-|...-+.+|.+|++.|+.++++......+...+-......+.+.+|= +.|++..+++++..+..++
T Consensus 374 ~~~~~~~f~~G~gpi~~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~ 452 (485)
T KOG0569|consen 374 IFLFIISFAIGPGPIPWFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYR 452 (485)
T ss_pred HHHHHHhhhcCCCchhHHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHH
Confidence 4444444332 4577888999999999999999999999888888777777777666665 8899999999999999999
Q ss_pred ccccccC
Q 010692 212 IKPLQLK 218 (503)
Q Consensus 212 ~~p~~~~ 218 (503)
.+||+..
T Consensus 453 ~lPETkg 459 (485)
T KOG0569|consen 453 YLPETKG 459 (485)
T ss_pred hCcccCC
Confidence 9999653
No 224
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=98.99 E-value=1.1e-08 Score=98.38 Aligned_cols=146 Identities=9% Similarity=0.032 Sum_probs=106.9
Q ss_pred HHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHH
Q 010692 288 YVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLG 366 (503)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~ 366 (503)
++..+..++.............|.+ ++.++.++.+. .+.+...++..++.+..|++.||+|+| +.+..+.++.
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r-----~~~~~g~~l~ 78 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYK-----AGILLGLFLY 78 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCch-----HHHHHHHHHH
Confidence 3344444555555555555666655 56678886555 555777889999999999999999999 6776666665
Q ss_pred HHHHHHHHH---hhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692 367 AISCLTAFC---LSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 440 (503)
Q Consensus 367 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 440 (503)
++..++... .++.+.++...++.+.+.+...+..+.++.+..|++++++..++.+...++ |..++|.+.+.+.
T Consensus 79 ~~g~~l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-G~~~g~~i~~~l~ 154 (410)
T TIGR00885 79 ALGAFLFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTATRRLNLAQSFNPF-GSIIGMVVAQQLI 154 (410)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 555444322 235566667777788888888888888888888888999999999888887 9888998888774
No 225
>KOG2504 consensus Monocarboxylate transporter [Carbohydrate transport and metabolism]
Probab=98.98 E-value=1.3e-09 Score=106.01 Aligned_cols=154 Identities=17% Similarity=0.194 Sum_probs=139.5
Q ss_pred cccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC--CchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 60 WFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 60 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
++++..++.+.++.+.+.+.++..+...++.++.|+++|+.. ++.+..+++++.+++...++++++++.++..-.+.|
T Consensus 320 ~l~~~~~~~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~p~~~~~~~l~~~~~~fG 399 (509)
T KOG2504|consen 320 YLPSYAKSLGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFLPFATTYVGLIVFSILFG 399 (509)
T ss_pred HHHHHHhhcCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 346667899999999999999999999999999999999998 556788888899999999999999999999999999
Q ss_pred hhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHHHHHHhcc
Q 010692 138 VGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
++.|........++.|..+.++-..+.|+.....+++.++||++++.+.+..| |...|+.+++..++....+++..
T Consensus 400 ~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 400 FCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFYFCGLCFLLSAVLLLILR 476 (509)
T ss_pred HHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehhhcChHHHHHHHHHHHhH
Confidence 99998888888899999999999999999999999999999999999988777 99999999988777776655543
No 226
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.96 E-value=6.2e-09 Score=83.79 Aligned_cols=128 Identities=16% Similarity=0.201 Sum_probs=95.0
Q ss_pred hhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhccc
Q 010692 329 VTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSV 408 (503)
Q Consensus 329 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 408 (503)
...++..++.++.+++.||++|| +.+...........+.....++.+......++.+.+.+...+.......+..
T Consensus 6 ~~~~~~~~~~~~~g~~~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 80 (141)
T TIGR00880 6 GYALGQLIYSPLSGLLTDRFGRK-----PVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIY 80 (141)
T ss_pred eehhHHHHHHhhHHHHHhhcchh-----HHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHC
Confidence 34566778889999999999998 5665555555554444444456666666677777777777777888889999
Q ss_pred CCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Q 010692 409 KPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 409 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 463 (503)
|+++|+++.++.+..... |..++|.+.+.+.+..+ ++..+.+.+...++..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 133 (141)
T TIGR00880 81 PPEERGVALGLMSAGIAL-GPLLGPPLGGVLAQFLG-WRAPFLFLAILALAAFIL 133 (141)
T ss_pred ChhhhhHHHHHHHHhHHH-HHHHhHHhHHHHhcccc-hHHHHHHHHHHHHHHHHH
Confidence 999999999999888877 88999999999988765 666776666554444433
No 227
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.92 E-value=1.9e-08 Score=97.66 Aligned_cols=121 Identities=17% Similarity=0.190 Sum_probs=107.1
Q ss_pred cccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhhh
Q 010692 66 GDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 66 ~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~~ 143 (503)
..++.+ ...+.+..+..++..++.+++++++||+|+|+++..+.++.+++.++..+.+ |.+.+++.-++.|++.+..
T Consensus 254 ~vl~~~-~~~~~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~ 332 (428)
T PF13347_consen 254 YVLGNE-GLISIFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAF 332 (428)
T ss_pred HHhcCc-hhhHHHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhccc
Confidence 334444 6778888999999999999999999999999999999999999999998886 9999999999999999999
Q ss_pred hhchhhhhhccCCC-------CCchhHHHHHHhHHhHHHHHHHHHHHhhcC
Q 010692 144 ISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGS 187 (503)
Q Consensus 144 ~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 187 (503)
.+...++++|..+. ++.|..++..+....+|..+++.+.+.+.+
T Consensus 333 ~~~~~a~~ad~id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~ 383 (428)
T PF13347_consen 333 FVIPWAMLADVIDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLA 383 (428)
T ss_pred ccccccccccchhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHH
Confidence 99999999998863 345888999999999999999998887753
No 228
>KOG3762 consensus Predicted transporter [General function prediction only]
Probab=98.91 E-value=7.3e-09 Score=96.74 Aligned_cols=149 Identities=17% Similarity=0.110 Sum_probs=135.9
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
.+|.+..+...|........+-++.-++.+++..|+|+-+++.+++.+..+=.+.....+|.|..+-..+++|+..+.++
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 47788788888988888999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hchhhhhhccCCCCCchhHHHHHHh-HHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYM-CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
.+..+|+++..|++-|..+.++.+. ..++|-.+|.++||.+.+.+|-|..|.+.++.+++..++...+-
T Consensus 478 aa~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~iq 547 (618)
T KOG3762|consen 478 AAIISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFISIQ 547 (618)
T ss_pred HHHHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999998765 57889999999999999999999999999988877766655443
No 229
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.89 E-value=2.5e-08 Score=97.97 Aligned_cols=118 Identities=19% Similarity=0.099 Sum_probs=95.6
Q ss_pred CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh-----hhHHHHHHHHHHHHHhhhhhhhh
Q 010692 71 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-----SFDFWSIAICRMLVGVGEASFIS 145 (503)
Q Consensus 71 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~l~G~g~~~~~~ 145 (503)
+....+++.+...++..++.+++++++||+|+|+.+.++..+..++.+...+ .++.+.+++.-++.|++.+...+
T Consensus 264 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~ 343 (473)
T PRK10429 264 DADLFPYYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWV 343 (473)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHH
Confidence 4556777778778899999999999999999999999888877766655432 35677777788889999999999
Q ss_pred chhhhhhccCC-------CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCc
Q 010692 146 LAAPFIDDNAP-------VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSH 188 (503)
Q Consensus 146 ~~~~~i~~~~~-------~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~ 188 (503)
...++++|..+ .++.|..++......-+|..+++.+.+++.+.
T Consensus 344 ~~~am~ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~ 393 (473)
T PRK10429 344 LQVIMVADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGL 393 (473)
T ss_pred HHHHHHhhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999865 33346688999999999999999998887643
No 230
>PRK10133 L-fucose transporter; Provisional
Probab=98.88 E-value=1.9e-08 Score=97.54 Aligned_cols=139 Identities=10% Similarity=-0.136 Sum_probs=113.2
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
++.+|.++.+.++....+.++..++.++.|++.||+|+|+++..+.++.+++.++..+.++.+ -+..-.+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 457899999999999999999999999999999999999999998888777776666655543 2456678899999999
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-hHHHHHHHHHHHHHHH
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-WRYAFWGEAILMLPFA 206 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-wr~~f~~~~~~~~~~~ 206 (503)
|...+...+..+++ .+.+.++..+ ..+|..++|.+.+.+.+..| -|..|++..+..+...
T Consensus 366 P~~~s~a~~~~~~~-~~~as~l~~~-~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~ 426 (438)
T PRK10133 366 PTIFSLGIKNLGQD-TKYGSSFIVM-TIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIF 426 (438)
T ss_pred HHHHHHHHcccchh-hccchhHHhH-HhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 99999999988764 6777777765 44688888899999988887 7888887665444333
No 231
>KOG3764 consensus Vesicular amine transporter [Intracellular trafficking, secretion, and vesicular transport]
Probab=98.88 E-value=5.5e-09 Score=93.92 Aligned_cols=149 Identities=12% Similarity=0.109 Sum_probs=123.7
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcC--CchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHN--PFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G--rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~ 142 (503)
.|.+..+..++|...--..+.+.++..+.|.++||++ |-.....++++.+++.....+++++.++++-++..|++.+.
T Consensus 298 ~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~ 377 (464)
T KOG3764|consen 298 LETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLRWLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGL 377 (464)
T ss_pred HHhccCCCcceeeeecccccchhccCchHHHHHHhcCchhHHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHH
Confidence 6777766669999888899999999999999999999 54455667777777777788999999999999888888877
Q ss_pred hhhchhhhhhccCCCC------CchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 143 FISLAAPFIDDNAPVP------QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~------~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
..........+..+.+ --|...++...++++|..+||.+++.+.+..|++|...+.++..++...++.++.
T Consensus 378 ~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~ 454 (464)
T KOG3764|consen 378 ADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYAIGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLR 454 (464)
T ss_pred HHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhhccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6665555555554332 3468899999999999999999999999999999999999999998888776654
No 232
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=98.87 E-value=3.6e-08 Score=96.33 Aligned_cols=176 Identities=14% Similarity=0.114 Sum_probs=119.0
Q ss_pred hhhhHHHHHHHHHHHHH----HhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHH
Q 010692 284 QEKVYVVNVLGYIAYNF----VIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLL 359 (503)
Q Consensus 284 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 359 (503)
++++++..+....+... ........++.+.++ .|.++...++.....++..++.++.|+++|.+||| ..+
T Consensus 38 ~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr-----~~~ 111 (599)
T PF06609_consen 38 RSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGSDNWSWFSTAWTLASAVSFPFVGRLSDLFGRR-----YFF 111 (599)
T ss_pred eCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCCccchHHHHHHHHHHHHHHHhhHHHHHHhcch-----HHH
Confidence 45555555443333222 222222334545555 44455555566667788888899999999999999 888
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHH
Q 010692 360 SAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l 439 (503)
+.+.++..+..+.....++...++....+.+.+.+... .....+.|.+|.+.|..+.++.... .+.....+|.+...+
T Consensus 112 i~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~-~~~~~isEl~p~k~R~~~~~~~~~~-~i~~~~~~~~ia~~~ 189 (599)
T PF06609_consen 112 IIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQE-LAALAISELVPNKWRGLGLAIASIP-FIITTWISPLIAQLF 189 (599)
T ss_pred HHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHH-HHHHHHHHhcccchhhhHhHHHHHH-HHhhhcccHHHHHHh
Confidence 88888888888888888888888888888887765443 3455578888889998888776543 333555677666555
Q ss_pred HhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692 440 QDHVNNWRKTTLALTSIFFLAAGIWFVGI 468 (503)
Q Consensus 440 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 468 (503)
... ++|++.|++.++...++.++.++..
T Consensus 190 ~~~-~~WRw~~~~~~i~~~i~~vl~~~fY 217 (599)
T PF06609_consen 190 AAH-SGWRWIFYIFIIWSGIALVLIFFFY 217 (599)
T ss_pred ccC-CCcchHHHHHHHHHHHHHHHHHHHh
Confidence 443 4699999988877666665554433
No 233
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=98.86 E-value=2.6e-08 Score=92.48 Aligned_cols=144 Identities=22% Similarity=0.344 Sum_probs=118.7
Q ss_pred cccccccCCCc--cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH--HHHHHHHHHHHH
Q 010692 62 TPKRGDFKLNN--FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FWSIAICRMLVG 137 (503)
Q Consensus 62 ~~i~~~~~~s~--~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l~G 137 (503)
+.+..+++.+. .+.++..+.+.++..+++++.|.+.||+|||+.+..+.....++.+++++..+ .+.+++.|+++|
T Consensus 26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 105 (338)
T COG0477 26 PLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQG 105 (338)
T ss_pred HHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHH
Confidence 33455565555 47899999999999999999999999999999888888776666777777766 899999999999
Q ss_pred hhhhhhhhchhhhhhccCCC-CCchhHHHHHHh-HHhHHHHHHHHHHHhhcCc--chhHHHHHHHHHHHHHH
Q 010692 138 VGEASFISLAAPFIDDNAPV-PQKTAWLSMFYM-CIPTGVALGYVYGGVVGSH--LNWRYAFWGEAILMLPF 205 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~-~~~~G~~~g~~l~~~l~~~--~gwr~~f~~~~~~~~~~ 205 (503)
++.+...+...+++.|++|+ ++|+...+.... ...+|..+++.+++.+... .+||..|.+........
T Consensus 106 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 106 LGGGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred hhhHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 99999999999999999998 678999998888 5888889998887776643 57999777766555433
No 234
>TIGR00901 2A0125 AmpG-related permease.
Probab=98.85 E-value=5.4e-09 Score=98.96 Aligned_cols=111 Identities=10% Similarity=-0.040 Sum_probs=94.2
Q ss_pred cccccccCCCccchhhHHHHHH-HHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-----------hHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFM-VGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-----------FDFWSI 129 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~-~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----------~~~~~l 129 (503)
+...+++|.+.++.+.+.++.. ++..++.+++|++.||+|||+.+..+.++.+++..+..+. ++++.+
T Consensus 233 ~~~l~~~g~~~~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (356)
T TIGR00901 233 TLFLLDMGFSKEEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLML 312 (356)
T ss_pred HHHHHHcCCCHHHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHH
Confidence 3334568999999998887665 6788999999999999999999998888888777765543 456778
Q ss_pred HHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHh
Q 010692 130 AICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIP 172 (503)
Q Consensus 130 ~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~ 172 (503)
..+.++.+++.+...+...+++.|.+|+++||+.+++.++..+
T Consensus 313 ~~~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 313 FLTITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHh
Confidence 8889999999999999999999999999999999999887654
No 235
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.84 E-value=2.3e-08 Score=97.58 Aligned_cols=126 Identities=10% Similarity=-0.018 Sum_probs=111.5
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh----------hHHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS----------FDFWSIAICRM 134 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----------~~~~~l~~~r~ 134 (503)
.+++|.++.+.|.+.....++..++....+++.+|++.|+++.++.++.+++.+..... ++.+.++..-+
T Consensus 280 ~~~lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~ 359 (468)
T TIGR00788 280 TQCLPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSI 359 (468)
T ss_pred cccCCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhH
Confidence 35789999999999999999999999999999999999999999999999888664311 34445566788
Q ss_pred HHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692 135 LVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 190 (503)
Q Consensus 135 l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 190 (503)
+.+++.+........++.+..|++++|...++.++..++|..+++.+++.+.+.+|
T Consensus 360 l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g 415 (468)
T TIGR00788 360 IAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIG 415 (468)
T ss_pred HHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999987665
No 236
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.79 E-value=6e-08 Score=86.56 Aligned_cols=154 Identities=18% Similarity=0.141 Sum_probs=126.7
Q ss_pred ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHH
Q 010692 59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVG 137 (503)
Q Consensus 59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 137 (503)
.++|++-.|-|+|..+.|++.+...+.....++....+.+|. ++|+..+....++.++...+.+.+.-..++- -++.|
T Consensus 229 ~WLP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG 307 (395)
T COG2807 229 GWLPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLG 307 (395)
T ss_pred HHHHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHh
Confidence 344777899999999999999999999999999999999966 6888888888888888888887765444333 49999
Q ss_pred hhhhhhhhchhhhhhccCCCC-CchhHHHHHHhHHhHHHHHHHHHHHhhcCcc-hhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 138 VGEASFISLAAPFIDDNAPVP-QKTAWLSMFYMCIPTGVALGYVYGGVVGSHL-NWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 138 ~g~~~~~~~~~~~i~~~~~~~-~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~-gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
+|.|..++.+...+.+..+.. +-++..++.+....+=..+||.+.|++-|.. +|+..++......+...+..+..-
T Consensus 308 ~G~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 308 LGQGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred CccchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999987654 4566777888877777888999999998765 599999888877777666666554
No 237
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=98.79 E-value=1.5e-07 Score=90.65 Aligned_cols=165 Identities=13% Similarity=0.036 Sum_probs=102.1
Q ss_pred HHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc----ccccchhhHHHHHHHHHHHHHH
Q 010692 295 YIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ----MGATISNAFKLLSAATFLGAIS 369 (503)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~~~~~~~~~ 369 (503)
.+...+.+.....+++.|+++ .|.++... .+..+..+.+++..++.|+++|| +|||+ ..+..+....+..
T Consensus 13 ~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRr----p~il~g~~~~~~~ 87 (477)
T TIGR01301 13 AAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRR----PFIAAGAALVAFA 87 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChH----HHHHHHHHHHHHH
Confidence 344445555556677777755 66775444 44456678888999999999995 77773 3333333333333
Q ss_pred HHHHHHhhhH-----------------HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCc--hhHHHHHHHHHhhcccc
Q 010692 370 CLTAFCLSSL-----------------YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLR--ALSMAISTVSIHIFGDV 430 (503)
Q Consensus 370 ~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~~~~~~~g~~ 430 (503)
..++....+. +..+..+.+..+......++..+++.|..|+++| +.+.++.+...++ |++
T Consensus 88 l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~l-G~i 166 (477)
T TIGR01301 88 VILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAI-GNV 166 (477)
T ss_pred HHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHH-HHH
Confidence 3333322211 2223333444556667788899999999998754 6789988877777 999
Q ss_pred cchhhHHHH--Hhhh------------hhHHHHHHHHHHHHHHHHHHHH
Q 010692 431 PSSPLVGVL--QDHV------------NNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 431 ~~~~~~g~l--~~~~------------g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
+++.+++.. .+.. .+++..|++.++++++...+..
T Consensus 167 lg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~ 215 (477)
T TIGR01301 167 LGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIAL 215 (477)
T ss_pred HHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHe
Confidence 888777654 2211 1456677766665555444433
No 238
>PTZ00207 hypothetical protein; Provisional
Probab=98.78 E-value=1.6e-07 Score=92.42 Aligned_cols=152 Identities=15% Similarity=0.088 Sum_probs=94.0
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---- 376 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 376 (503)
.+.+..+.|. +++.++.+..+. .+..+ +.......+..|++.||+|+| +++..+.++..+..++....
T Consensus 43 ~y~fsv~s~~-L~~~lgls~~~l~~i~sv-g~~~g~~~lp~G~L~Dr~G~R-----~vllig~ll~~iG~ll~ala~~~~ 115 (591)
T PTZ00207 43 MYAFNLISGA-MQARYNLTQRDLSTITTV-GIAVGYFLLPYSFIYDYLGPR-----PIFVLSMTVFCLGTLLFALTFQEV 115 (591)
T ss_pred HHHHHHHHHH-HHHHhCcCHHHHHHHHHH-HHHHHHHHHHHHHHHHHhCcH-----HHHHHHHHHHHHHHHHHHHHhccc
Confidence 4455555564 456688886554 22222 222234556789999999999 77776666666655554443
Q ss_pred --hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccc-cchhhHHHHHhhhhhHHHHHHHH
Q 010692 377 --SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDV-PSSPLVGVLQDHVNNWRKTTLAL 453 (503)
Q Consensus 377 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~-~~~~~~g~l~~~~g~~~~~~~~~ 453 (503)
.+.+.+.+..++.+.+.+...+.....+.+.+ |++||.+.|+.....++ |.+ +++...+++.+ ++...+++.
T Consensus 116 i~~s~~~l~l~r~l~G~G~~~~~~~~~~~i~~~F-p~~RG~a~Gi~~~~~gL-GsaI~~~l~~~l~~~---~~~~~fl~l 190 (591)
T PTZ00207 116 IEGSVVRLSVYNGLMTLGCMLFDLGAVVTVLSVF-PSNRGAVVAIMKTFTGL-GSAILGSIQLAFFSD---NTSAYFFFL 190 (591)
T ss_pred ccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-hhhhHHHHHHHHHHHHH-HHHHHHHHHHHHHHH---hHHHHHHHH
Confidence 35555666666666666655566666666666 57899999999988888 665 45545554443 244566666
Q ss_pred HHHHHHHHHHHH
Q 010692 454 TSIFFLAAGIWF 465 (503)
Q Consensus 454 ~~~~~~~~~~~~ 465 (503)
+++.++..++..
T Consensus 191 ~vl~~vv~ll~~ 202 (591)
T PTZ00207 191 MSFALVVGILAI 202 (591)
T ss_pred HHHHHHHHHHHH
Confidence 555554444443
No 239
>PRK09669 putative symporter YagG; Provisional
Probab=98.75 E-value=6.8e-08 Score=94.30 Aligned_cols=119 Identities=13% Similarity=0.087 Sum_probs=93.6
Q ss_pred cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh--hhHHHHHHHHHHHHHhhhhhhhhchhhh
Q 010692 73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS--SFDFWSIAICRMLVGVGEASFISLAAPF 150 (503)
Q Consensus 73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~--~~~~~~l~~~r~l~G~g~~~~~~~~~~~ 150 (503)
...+.+.....+...++.+++++++||+|+|+.+..+.++.++..+...+ .++.+.+++..++.|++.+...+...++
T Consensus 264 ~~~~~~~~~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am 343 (444)
T PRK09669 264 DLATLFLVTGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSM 343 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34455666777888899999999999999999998888766654443322 3577788888899999999999999999
Q ss_pred hhccCCC-------CCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchh
Q 010692 151 IDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 191 (503)
Q Consensus 151 i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 191 (503)
++|..+. ++.|...+..+....+|..+|+.+++.+.+..|+
T Consensus 344 ~ad~~d~~e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 344 FSDVVDYEEKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred HHhhhhhhhhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 9998752 2345678889999999999999999887654443
No 240
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=98.73 E-value=5.1e-08 Score=91.07 Aligned_cols=177 Identities=12% Similarity=0.052 Sum_probs=126.8
Q ss_pred hhhHHHHHHHHHHHHHHhhhhhccccchhhhhcc----cchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHH
Q 010692 285 EKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYH----MSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKL 358 (503)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~ 358 (503)
.|.++.+...-+.--++++++...+..|+....+ .++..+ .+...+....-+..+++||++|| +|+| +.
T Consensus 20 Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~-----~t 94 (498)
T COG3104 20 PRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR-----RT 94 (498)
T ss_pred CchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh-----HH
Confidence 3455666666677778888888877778877776 775444 33333333334467889999999 4777 66
Q ss_pred HHHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCC--CCchhHHHHHHHHHhhcccccchh
Q 010692 359 LSAATFLGAISCLTAFCL--SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKP--SLRALSMAISTVSIHIFGDVPSSP 434 (503)
Q Consensus 359 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~g~~~~~~ 434 (503)
++.+.++.++..+.+... .....+.+.+.+...+.+..=+....+..+.+|+ ..|..+.++.+...++ |++++|.
T Consensus 95 I~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~DprrD~gFt~fY~~iNi-Gsl~~p~ 173 (498)
T COG3104 95 IVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPRRDGGFTLFYMGINI-GSLIAPI 173 (498)
T ss_pred HHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcccCCCccEEEEEeeh-HHHHHHH
Confidence 666666555555555444 3455556666666677788888888899999987 3577788888888888 9999999
Q ss_pred hHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 010692 435 LVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVGI 468 (503)
Q Consensus 435 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 468 (503)
+.+++.++.| |...|...++-...+.+.+...+
T Consensus 174 i~~~~~~~~g-~~~gF~~aavGm~~gl~~f~~~~ 206 (498)
T COG3104 174 ITGLLAINYG-WHVGFGLAAVGMIIGLVIFLLGR 206 (498)
T ss_pred HHHHHHHhhC-HHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999988 88888888877777766665443
No 241
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=98.72 E-value=6e-08 Score=97.93 Aligned_cols=125 Identities=8% Similarity=-0.054 Sum_probs=89.1
Q ss_pred hhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh-------------
Q 010692 312 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------- 377 (503)
Q Consensus 312 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 377 (503)
-+++.++.+.... .+.+...++..++.++.+++.||.+|| +++..+.++..+..++....+
T Consensus 58 ~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~-----~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~ 132 (633)
T TIGR00805 58 TIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRP-----IVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVS 132 (633)
T ss_pred hhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcc-----eEEEecHHHHHHHHHHHhChHHhcCCcccccccc
Confidence 3445577775444 555677888899999999999999998 555555444444443332221
Q ss_pred --------------------------------------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHH
Q 010692 378 --------------------------------------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAI 419 (503)
Q Consensus 378 --------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 419 (503)
....+++.-++.|++.+..++....++.|.+|+++|+...|+
T Consensus 133 ~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~~~~~~~~~i 212 (633)
T TIGR00805 133 STGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKSKNSPLYIGI 212 (633)
T ss_pred ccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCccccHHHHHH
Confidence 112334555666666667777788899999999999999999
Q ss_pred HHHHHhhcccccchhhHHHHHhh
Q 010692 420 STVSIHIFGDVPSSPLVGVLQDH 442 (503)
Q Consensus 420 ~~~~~~~~g~~~~~~~~g~l~~~ 442 (503)
.+....+ |..+|+.+++++.+.
T Consensus 213 ~~~~~~i-G~~lG~llgg~l~~~ 234 (633)
T TIGR00805 213 LESIAVF-GPAFGYLLGSFCLQI 234 (633)
T ss_pred HHHHHHh-hhHHHHHHHHHHHhc
Confidence 9877776 989999999988754
No 242
>KOG0253 consensus Synaptic vesicle transporter SV2 (major facilitator superfamily) [General function prediction only]
Probab=98.72 E-value=4.2e-08 Score=87.28 Aligned_cols=127 Identities=7% Similarity=0.037 Sum_probs=97.1
Q ss_pred HHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH--HH--HHHHHHHHHHhhhhhhhhchhhhhhccCC
Q 010692 81 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD--FW--SIAICRMLVGVGEASFISLAAPFIDDNAP 156 (503)
Q Consensus 81 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~--~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 156 (503)
+..+.-.-|.++.+++.||+|||+++..+.+++++..++...+.+ .. .++.+|++.. +.+.+.+.|..|.+|
T Consensus 389 itslaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafis----g~fqvaYvYtPEVyP 464 (528)
T KOG0253|consen 389 ITSLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFIS----GAFQVAYVYTPEVYP 464 (528)
T ss_pred HHHHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHh----chheEEEEecCcccc
Confidence 445666789999999999999999999999999999988776643 32 2344665543 455678899999999
Q ss_pred CCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 157 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 157 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
.+-|+...|..+...-+|.++.|+++ ...+ .+-..+..+.+.++++..+...+++
T Consensus 465 TavRatgvGtcSsmaRIggI~~p~iA-~~~e-~s~sl~i~vy~~~~ilagIavcffP 519 (528)
T KOG0253|consen 465 TAVRATGVGTCSSMARIGGIFSPVIA-MRAE-LSTSLPIFVYGALFILAGIAVCFFP 519 (528)
T ss_pred hhhhhcchhhhhhHHhhhhhhhhHHH-HHhc-cceeehHHHHHHHHHHHHHHheeee
Confidence 99999999999999999999999998 3222 2334455566666666666665554
No 243
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=98.70 E-value=5.4e-06 Score=74.41 Aligned_cols=352 Identities=10% Similarity=-0.026 Sum_probs=180.5
Q ss_pred CCchhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh-----hcCCchh-----
Q 010692 36 RPPPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-----SHNPFRL----- 105 (503)
Q Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-----r~Grr~~----- 105 (503)
+..+.+.....+..++... ..|.+ -+.=|.|-++.+....++. -...-++|.++.| |+||||.
T Consensus 33 illLl~LYllQGiP~GL~~-~iP~l----L~ak~vSyt~~a~fS~ay~--P~sLKllWaPiVDs~y~k~~GrrksWvvp~ 105 (510)
T KOG3574|consen 33 ILLLLFLYLLQGIPLGLIG-AIPLL----LQAKGVSYTSQAIFSFAYW--PFSLKLLWAPIVDSVYSKRFGRRKSWVVPC 105 (510)
T ss_pred HHHHHHHHHHcCCchhHhh-hhHHH----hcCCCcchhhhhhhhhhhh--HHHHHHHHHhhhHHHHHHhhccccceeeeh
Confidence 3344444555555433444 44444 4666777777665433221 1134567888888 9999984
Q ss_pred -HHHHHHHHHHHHHHh------hhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHH
Q 010692 106 -IGVGLSVWTFATAGC------GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALG 178 (503)
Q Consensus 106 -l~~~~~~~~~~~~~~------~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g 178 (503)
.++|.++..++...- +-.++...+...-++.-+..+.--.+.-.+.-....+++.|.+......+.+.|..++
T Consensus 106 q~llG~~mllLs~~v~~~~g~ng~~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs~e~lgyaST~q~Vg~~~GyfL~ 185 (510)
T KOG3574|consen 106 QYLLGLFMLLLSYLVDRGLGGNGGLPNVVALTLLFLLLNFLAATQDIAVDGWALTMLSRENLGYASTCQSVGQTAGYFLG 185 (510)
T ss_pred HHHHHHHHHHHhhCCCcccccCCCCcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcCHhhcCchhHHHHHHHhhhHHhh
Confidence 233333333332211 1123333343344455555555556666666677788888888888888777777776
Q ss_pred HHHHHhhcC-----c--chh---------HHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccccccCcccCC
Q 010692 179 YVYGGVVGS-----H--LNW---------RYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASN 242 (503)
Q Consensus 179 ~~l~~~l~~-----~--~gw---------r~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (503)
..+--.+.. . .+| ..-.++.+.+.++...+..+..+|. +++.. +|.
T Consensus 186 ~~ifLaL~s~dF~N~y~rs~P~~~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~------~~~~~----~e~-------- 247 (510)
T KOG3574|consen 186 NVVFLALESPDFCNTYLRSIPLDQGFITLAGYLWFWGALFIVATTLVALLKKEN------DESVD----EEL-------- 247 (510)
T ss_pred cceeeEecChhhhhHHHhcCcCccceEEhhHHHHHHHHHHHHHHHHHHHhcCCC------chhhh----hhh--------
Confidence 654322221 0 011 1223334444444444444432221 11100 000
Q ss_pred CCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchh
Q 010692 243 LNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA 322 (503)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (503)
+ ...++..+-++++++-|............-.++.+-....+.-+.+ .|.+..
T Consensus 248 ---------------~-----------~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t~LkLle-~Gv~ke 300 (510)
T KOG3574|consen 248 ---------------E-----------LGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALTSLKLLE-HGVPKE 300 (510)
T ss_pred ---------------h-----------cCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhccchHHHH-cCCChh
Confidence 0 1112223456777777777777766666666776767777776666 466644
Q ss_pred hHHHHHhhhhhhhhchhhhhhhhhcccc--cchhh--HHHH--HHHHHHHHHHHHHHHHhhh---------HHHHHHHHH
Q 010692 323 DMMFGGVTIVCGIVGTISGGFILDQMGA--TISNA--FKLL--SAATFLGAISCLTAFCLSS---------LYGFLALFT 387 (503)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~ 387 (503)
...+ ..+..++..+..+++..|+-. |+... +.+. ++......+.......... ...++....
T Consensus 301 ~Lal---~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t~Lv~~~~~~~~~~G~~~~~~~il~i~~y~ 377 (510)
T KOG3574|consen 301 ELAL---IAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQTALVWWTPTLGHSDGTFPRGYYILLITSYA 377 (510)
T ss_pred Hhee---eeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHHHHHhhhcccccCCCceeechHHHHHHHHH
Confidence 3321 223444445555555555432 11100 0111 1111111111111111111 111222233
Q ss_pred HHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh
Q 010692 388 VGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV 443 (503)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~ 443 (503)
+.+.+....+...++..++..+|...|+.+.+.|+..++ |+-.-..+..++.|..
T Consensus 378 ~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnL-Gg~wp~tv~l~l~D~l 432 (510)
T KOG3574|consen 378 FHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNL-GGNWPGTVALWLADGL 432 (510)
T ss_pred HhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHh-cCCcHHHHHHHhcccC
Confidence 444444455556777788889999999999999999999 6554555777887754
No 244
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.66 E-value=3.8e-05 Score=72.10 Aligned_cols=383 Identities=9% Similarity=-0.024 Sum_probs=176.1
Q ss_pred chhHHHHHHhhhcccCCCCCcccccccccccCCCccchhhHHH-H--HHHHHHHHHhHHHHhhhhcCCchhHHH-HHHHH
Q 010692 38 PPLAEAEMATRSLSEDSPPTPSWFTPKRGDFKLNNFQDGVLSS-A--FMVGLLVASPIFASLAKSHNPFRLIGV-GLSVW 113 (503)
Q Consensus 38 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~s~~~~g~~~s-~--~~~~~~~~~~~~g~l~dr~Grr~~l~~-~~~~~ 113 (503)
++.+..++.+..++......|.++.++. -+.|.+|.|.+.- . |++=..-+.++=.....|+||||.-++ .-.+.
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~--~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~ 81 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMA--KKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWIIPIQYLS 81 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhcccc--CCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhhHHHHHH
Confidence 3455566666655555455555542222 4567777765422 1 222222233333344459999995332 22222
Q ss_pred HHHHHHhhhhh----------------------HH--HHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHh
Q 010692 114 TFATAGCGSSF----------------------DF--WSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYM 169 (503)
Q Consensus 114 ~~~~~~~~~~~----------------------~~--~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~ 169 (503)
++..+..+..- ++ ..+...-++.=+-++.--.+.-.+.-....+++++.|......
T Consensus 82 g~~m~~l~~~i~~~~~~~~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls~~n~~~ASTcqtv 161 (544)
T PF13000_consen 82 GILMLYLSYNISQWLLFDGVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLSPENVGYASTCQTV 161 (544)
T ss_pred HHHHHHHHhccchhhcccccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcChhhcchHHHHHHh
Confidence 22222222111 11 1122222222222222333444455555677889998888888
Q ss_pred HHhHHHHHHHHHHHhhcCc----------------chhHHHHHHHHHHHHHHHHHHHhccccccCCCCcccccccccccc
Q 010692 170 CIPTGVALGYVYGGVVGSH----------------LNWRYAFWGEAILMLPFAVLAFVIKPLQLKGFAPAESGKAQVVAS 233 (503)
Q Consensus 170 ~~~~G~~~g~~l~~~l~~~----------------~gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 233 (503)
+.+.|..++..+.-.+.+. ..-..-..+.+.+.++..+...++.+|.+.....++..+ ...++
T Consensus 162 G~~~Gyfls~tvFlalns~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~-~~~~~ 240 (544)
T PF13000_consen 162 GQTAGYFLSFTVFLALNSPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEP-INKSD 240 (544)
T ss_pred HhhhhHHHHHHHHHhhCCHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccc-ccccc
Confidence 8888888877665444321 111222234444445555555555554332211111010 00000
Q ss_pred cccCcccCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchh
Q 010692 234 VSEGSEASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAG 313 (503)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (503)
+..++...+..+..... .......++..+.+.+++|-|.+..+.+.....-.++...-.-...-+
T Consensus 241 --------~~~~~~~~~~~~~~~~~-------~~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKL 305 (544)
T PF13000_consen 241 --------GKSKEISIEYDESDVIS-------TEEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKL 305 (544)
T ss_pred --------ccccccceecccccccc-------hhhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHH
Confidence 00000000000000000 000122333445566778888888777766666665555444444444
Q ss_pred hhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchh----------------hHHHHH----------HHHHHHH
Q 010692 314 YNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISN----------------AFKLLS----------AATFLGA 367 (503)
Q Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----------------~~~~~~----------~~~~~~~ 367 (503)
.+ .|++.....+. .+..++..++.++++.|+-+..+. ..+.++ .+...-.
T Consensus 306 lE-kG~~KE~LAl~---~li~~P~qii~~~~~~Kws~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL 381 (544)
T PF13000_consen 306 LE-KGLSKEDLALL---VLIDFPFQIILPYYIGKWSAGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRL 381 (544)
T ss_pred HH-cCCCHHHhHHH---HHHhhhHHHHHHHHhhhhhcCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHH
Confidence 44 56665444222 233444455555555554322110 001111 1111001
Q ss_pred HHHHHH----HHhh-----hHH---HHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhh
Q 010692 368 ISCLTA----FCLS-----SLY---GFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPL 435 (503)
Q Consensus 368 ~~~~~~----~~~~-----~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~ 435 (503)
...++. ...+ +.+ .++...++..+.....+....+.-++...|..-|+.+.+.|+..|+ |+-.-..+
T Consensus 382 ~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf~stvmFVai~AFharISDP~IGGTYMTLLNTvSNL-GGtWP~~~ 460 (544)
T PF13000_consen 382 VAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSFMSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNL-GGTWPRTF 460 (544)
T ss_pred HHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhc-CCCchHHH
Confidence 111110 1111 111 1222233344444456667777888888999999999999999999 66654545
Q ss_pred HHHHHhhh
Q 010692 436 VGVLQDHV 443 (503)
Q Consensus 436 ~g~l~~~~ 443 (503)
.=++.|..
T Consensus 461 vL~lVD~f 468 (544)
T PF13000_consen 461 VLWLVDYF 468 (544)
T ss_pred HHHHhhhc
Confidence 55666643
No 245
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.62 E-value=2.2e-06 Score=78.73 Aligned_cols=149 Identities=19% Similarity=0.166 Sum_probs=125.3
Q ss_pred ccc-ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhh-hcCCchhHHHHHHHHHHHHHHhhh---hhHHHHHHHHHHHH
Q 010692 62 TPK-RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAK-SHNPFRLIGVGLSVWTFATAGCGS---SFDFWSIAICRMLV 136 (503)
Q Consensus 62 ~~i-~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~ 136 (503)
.|. .+-||+|..|...+.+....|..++-...|++.. |.++|+...+++....++..+..+ ..+.+.+..+-++.
T Consensus 232 EPygg~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~ 311 (403)
T PF03209_consen 232 EPYGGEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLL 311 (403)
T ss_pred CCchhHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHH
Confidence 444 4668999999999999999999999999999987 678888888888888777766544 46788999999999
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC----------cchhHHHHHHHHHHHHHHH
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS----------HLNWRYAFWGEAILMLPFA 206 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~----------~~gwr~~f~~~~~~~~~~~ 206 (503)
|++.|.+.....+.+.|...+++.|..+|.+.....++..+|..+++.+.| ..+|-.+|.+.++..++..
T Consensus 312 G~g~G~f~vgals~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~ 391 (403)
T PF03209_consen 312 GLGNGLFTVGALSLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAAL 391 (403)
T ss_pred HHhhhHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999987643 2367888888877665555
Q ss_pred HHHH
Q 010692 207 VLAF 210 (503)
Q Consensus 207 ~~~~ 210 (503)
.+..
T Consensus 392 ~ll~ 395 (403)
T PF03209_consen 392 VLLG 395 (403)
T ss_pred HHHH
Confidence 5443
No 246
>KOG2532 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.61 E-value=3.4e-07 Score=88.09 Aligned_cols=146 Identities=19% Similarity=0.283 Sum_probs=114.2
Q ss_pred hcccchhh-HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHH
Q 010692 316 IYHMSNAD-MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELL 392 (503)
Q Consensus 316 ~~~~~~~~-~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 392 (503)
.+..+..+ ..+.+....+.+++.+.+|++.||+|.| +++..+.++.++..++..... +.+.+++.=++-|++
T Consensus 67 ~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r-----~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~ 141 (466)
T KOG2532|consen 67 EYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGAR-----RVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLG 141 (466)
T ss_pred eecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCch-----HHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHH
Confidence 45555433 3555677889999999999999999999 777777777666665555443 334556666778888
Q ss_pred HhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHH
Q 010692 393 VFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFVG 467 (503)
Q Consensus 393 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 467 (503)
.+..++....+..+-.|+++|++..++.....++ |.+++-++.|++.+...+|...|++.+++.++..++++..
T Consensus 142 ~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~-g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~ 215 (466)
T KOG2532|consen 142 QGVLFPAIGSILAKWAPPNERSTFIAILTAGSQL-GTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLF 215 (466)
T ss_pred HhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 8899999999999999999999999999877777 8888888999999983349999999988877766666543
No 247
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=98.59 E-value=6.8e-06 Score=81.01 Aligned_cols=154 Identities=14% Similarity=0.084 Sum_probs=122.4
Q ss_pred ccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHHHHHhhhhhH------------
Q 010692 59 SWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFATAGCGSSFD------------ 125 (503)
Q Consensus 59 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~~------------ 125 (503)
.++.-+.++++.+...+.-.++.+.-......+.++.++|-| ||-+++.++.++..+|..+..++..
T Consensus 59 nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~ 138 (571)
T KOG1237|consen 59 NLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFK 138 (571)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCC
Confidence 333555788888887888888899999999999999999987 9999999999999888765544311
Q ss_pred -------------HHHHHHHHHHHHhhhhhhhhchhhhhhccCC---CC---CchhHHHHHHhHHhHHHHHHHHHHHhhc
Q 010692 126 -------------FWSIAICRMLVGVGEASFISLAAPFIDDNAP---VP---QKTAWLSMFYMCIPTGVALGYVYGGVVG 186 (503)
Q Consensus 126 -------------~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~---~~---~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 186 (503)
...++.+.-+..+|.|+.-+...++-+|-++ ++ ++...+.++....++|..++..+-.+.-
T Consensus 139 ~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq 218 (571)
T KOG1237|consen 139 PGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQ 218 (571)
T ss_pred CCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhh
Confidence 2356677778888999999999999999998 32 2336788999999999999999988888
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 187 SHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 187 ~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
++.+|.+.|.+..+..++..++.+..
T Consensus 219 ~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 219 DNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred hcccceeeccHHHHHHHHHHHHHHcC
Confidence 88899999999887766555554443
No 248
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.59 E-value=1.1e-06 Score=83.04 Aligned_cols=123 Identities=17% Similarity=0.100 Sum_probs=100.9
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhh--HHHHHHHHHHHHHhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSF--DFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~g~~~ 142 (503)
..-+|.++.+..+.......+..++.+++.++.+|+|+|+++.++.++..++.++..+.+ +.+.+++..++.++|.+.
T Consensus 264 ~y~lg~~~l~~~~~~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~ 343 (467)
T COG2211 264 TYVLGDPELFAYLLLLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGI 343 (467)
T ss_pred EEEcCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhc
Confidence 334555666667788888888888899999999999999999999999999999988876 788889999999999999
Q ss_pred hhhchhhhhhccCCC-------CCchhHHHHHHhHHhHHHHHHHHHHHhhcC
Q 010692 143 FISLAAPFIDDNAPV-------PQKTAWLSMFYMCIPTGVALGYVYGGVVGS 187 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~-------~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 187 (503)
..+...++++|..+- +.-|...+......=+|.+++..+.++..+
T Consensus 344 ~~~l~wam~~d~vDyge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~ 395 (467)
T COG2211 344 ANPLPWAMVADTVDYGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILG 395 (467)
T ss_pred cccccHHHhcchhhHHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999887642 223667777777777888888877766553
No 249
>KOG0255 consensus Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily) [General function prediction only]
Probab=98.55 E-value=2.7e-07 Score=92.15 Aligned_cols=130 Identities=15% Similarity=0.153 Sum_probs=109.4
Q ss_pred HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHh
Q 010692 325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 404 (503)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (503)
...++..++..+|.++.|.++||+||| +.+..+.++..++.+.....++.+..++.=++.|++.+........+.
T Consensus 122 ~~~s~~~~G~~vG~~i~g~lsD~~GRk-----~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~~~~~~~ 196 (521)
T KOG0255|consen 122 LGQSLFFLGVLVGSLIFGPLSDRFGRK-----PVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLTVGFGLV 196 (521)
T ss_pred HHHHHHHHHHHHHHhhheehHhhcccH-----HHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhHHhHhhh
Confidence 445778889999999999999999999 888888888888888888889999999999999999999999999999
Q ss_pred hcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHH
Q 010692 405 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIW 464 (503)
Q Consensus 405 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 464 (503)
.|.++++.|+.+..+ ....+. ++..+|...+++.. +|+..+++......+..++.
T Consensus 197 ~E~~~~~~R~~~~~~-~~~~~~-~~~~~~~~~a~~~~---~Wr~~~~~~~~~~~~~~~~~ 251 (521)
T KOG0255|consen 197 AEIVSPKQRGLALTL-GGFFFV-GGLMLPAGAAYITR---DWRWLFWIISIPSGLFLLLW 251 (521)
T ss_pred eeecCcchhhHHHHH-HHHHHH-HHHHHHHHHHHHHh---hHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999 566666 66667888888877 47788877766655555543
No 250
>KOG2533 consensus Permease of the major facilitator superfamily [Carbohydrate transport and metabolism]
Probab=98.55 E-value=4.3e-07 Score=87.68 Aligned_cols=135 Identities=20% Similarity=0.172 Sum_probs=106.8
Q ss_pred HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHh
Q 010692 325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVC 404 (503)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (503)
...+++.++.+++.+.++.+.||++-. +.+....+...+..++....++.+.+++.-++.|++.+..+|....++
T Consensus 85 ~~~t~F~v~Yii~~~p~~~L~~r~~ls-----~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP~~~~~l 159 (495)
T KOG2533|consen 85 VLDTVFYVGYIIGQFPSGLLGDRFPLS-----KGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWPGVVAIL 159 (495)
T ss_pred hHHHHHHHHHHHHHhhHHHHHHhCChH-----HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccchHHHHHH
Confidence 455788899999999999999999954 555555555555554555578888999999999999999999999999
Q ss_pred hcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh-----hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 405 LHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-----HVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 405 ~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-----~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
..-+.+++|+..+|+.+....+ |+++|+++...+.+ ..-+|++.|++-+++.++..++.+
T Consensus 160 g~wy~~~e~g~r~~~~~a~~~~-g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f 224 (495)
T KOG2533|consen 160 GNWYGKSERGLRMGIWYASASL-GNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVF 224 (495)
T ss_pred HhhcChhhhhhhHHHHHHhcch-hhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEE
Confidence 9999999999999999887777 88888877766532 122488999998877666655444
No 251
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=98.54 E-value=2.5e-06 Score=77.64 Aligned_cols=128 Identities=11% Similarity=0.035 Sum_probs=99.5
Q ss_pred cccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh---hhHHHHH
Q 010692 308 WGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL---SSLYGFL 383 (503)
Q Consensus 308 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 383 (503)
-+-..+++.++.+..+. .+......+..+..+..+++.+|++.| +-++.+..+.++.+.++... .+...++
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk-----~gi~lgL~l~avg~~lF~pAa~~~~y~~FL 108 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYK-----AGIVLGLLLYAVGAALFWPAASSKSYGFFL 108 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHhhhhhhhhHHHHH
Confidence 33346677788887555 556777788899999999999999999 66666777766666665433 3455666
Q ss_pred HHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692 384 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 441 (503)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 441 (503)
+.+++.+.+.+......+.++...-+++....-+.+.+.++.+ |++++|.+++.+..
T Consensus 109 ~~lFila~Gi~~LetaaNp~v~~lg~~~~a~~rlnl~q~fn~l-Ga~~gp~~g~~lil 165 (422)
T COG0738 109 VALFILASGIGLLETAANPYVTLLGKPESAAFRLNLAQAFNGL-GAILGPLLGSSLIL 165 (422)
T ss_pred HHHHHHHhhhHHHHhccchHHHHhCCchhHHHHHHHHHHhhhh-HHHHHHHHHHHHHH
Confidence 6677777777777778888888888888888888898888888 99999999999887
No 252
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.54 E-value=9.5e-07 Score=70.81 Aligned_cols=108 Identities=9% Similarity=0.111 Sum_probs=93.5
Q ss_pred hHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCC
Q 010692 77 VLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAP 156 (503)
Q Consensus 77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~ 156 (503)
.-.++......+.+++.+.+.+++|.|+.+++|.+.+.+-... -+-++.+.++.+-.+.|++.+..++....++.+...
T Consensus 41 ~slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~ 119 (156)
T PF05978_consen 41 YSLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST 119 (156)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC
Confidence 3466777778889999999999999999999999999865444 356788899999999999999999999999999999
Q ss_pred CCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692 157 VPQKTAWLSMFYMCIPTGVALGYVYGGVV 185 (503)
Q Consensus 157 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 185 (503)
+++|++..+++......+.++|.++...+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998888887765444
No 253
>PRK11462 putative transporter; Provisional
Probab=98.49 E-value=2.1e-06 Score=83.86 Aligned_cols=151 Identities=13% Similarity=0.057 Sum_probs=98.9
Q ss_pred HHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHH
Q 010692 293 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCL 371 (503)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~ 371 (503)
+.-+........+..|+..|+.+..|.++... .+..+.-+...+.-++.|.++||...|.+++|..+..+.....+...
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 33344445555666788888899999997655 33455557778889999999999876666666777666555554444
Q ss_pred HHHHhhh------HHHHHHHHHHHHHHHhhccchhhHHhhcccCC-CCchhHHHHHHHHHhhcccccchhhHHHHHhhhh
Q 010692 372 TAFCLSS------LYGFLALFTVGELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 372 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g 444 (503)
+.+..+. .....+..++...+......|..++..+..+. ++|++..+.......+ |..+++.+...+.+..|
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~i-G~~~~~~~~~plv~~~g 174 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATA-GGMLSTVLMMPLVNLIG 174 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHhC
Confidence 4443221 22233344445556666666777888877764 8999999988766666 76667666555554443
No 254
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.39 E-value=2.6e-07 Score=64.50 Aligned_cols=73 Identities=27% Similarity=0.376 Sum_probs=66.8
Q ss_pred cccccccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHH
Q 010692 58 PSWFTPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIA 130 (503)
Q Consensus 58 ~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 130 (503)
.+++|.+++|.++|.++.|++.+++.+||.+|.+...++.++..+++.+..+++...+..+.+++.++++...
T Consensus 12 TplLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 12 TPLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred HhHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 3445888999999999999999999999999999999999998889999999999999999999999887653
No 255
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.38 E-value=0.0003 Score=68.03 Aligned_cols=244 Identities=14% Similarity=0.112 Sum_probs=136.4
Q ss_pred ccchhhHHHHHHH-HHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh---------------------------
Q 010692 72 NFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS--------------------------- 123 (503)
Q Consensus 72 ~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------------------------- 123 (503)
++.+..+=....+ +..+...+..+++++++|.+++-+....+.....++++.
T Consensus 57 ae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~~ 136 (491)
T PF03219_consen 57 AEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFKG 136 (491)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHHH
Confidence 3444555443344 444567778999999999998887777776666666552
Q ss_pred ----hHHHHHHHHHHHHHhhhhhhhh-chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC---------cc
Q 010692 124 ----FDFWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS---------HL 189 (503)
Q Consensus 124 ----~~~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~---------~~ 189 (503)
-+.|.+.+.-++.-+-+....+ .-..+..|.++.+|-.|..+++..+.++|.+++..+...+.+ ..
T Consensus 137 ~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~~~ 216 (491)
T PF03219_consen 137 FIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAGVD 216 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccc
Confidence 0123333333333332233322 457888999999999999999999999999999988887776 22
Q ss_pred hhHHHHHHHHHHHHHHH---HHHHhccccccCCCCcccccccccccccccCcccCCCCCccccccchhhhhhhhcccchh
Q 010692 190 NWRYAFWGEAILMLPFA---VLAFVIKPLQLKGFAPAESGKAQVVASVSEGSEASNLNDHVSEDISDQASERSIKSIGES 266 (503)
Q Consensus 190 gwr~~f~~~~~~~~~~~---~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 266 (503)
.|.........+.++.. +.......+.... +++..+. ...+ +++
T Consensus 217 ~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~--~~~~~~~-------------------------~~~~--kk~---- 263 (491)
T PF03219_consen 217 AWELSLNSLMGIVLILGIVIILLYRYMNKNVLT--DPRFYPS-------------------------AKKK--KKK---- 263 (491)
T ss_pred cHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccC--ccccchh-------------------------hhcc--ccc----
Confidence 46544322221111111 1122222111000 0000000 0000 000
Q ss_pred hhhhhhhchHHHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchh-hH---HHHHhhhhhhhhchhhhh
Q 010692 267 RFLNQLSQFSQDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DM---MFGGVTIVCGIVGTISGG 342 (503)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~~g 342 (503)
+......++++.++++|.+..+.+...+++...+.+..-.-..+++.+..+.+ +. .+....++..++..++++
T Consensus 264 ---k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi~inLvE~~wK~~lk~~~~~~~~ysafmG~~~~~tGivtii~~~l~~ 340 (491)
T PF03219_consen 264 ---KPKMSLKESFKLLLKSKYLLCIALLVIAYGISINLVEVVWKSQLKQLYPDPNDYSAFMGKFSSWTGIVTIIMMFLSS 340 (491)
T ss_pred ---CCCccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11123346788889999999888877777777666554333344443332211 11 223344455555567788
Q ss_pred hhhhccccc
Q 010692 343 FILDQMGAT 351 (503)
Q Consensus 343 ~l~d~~~~~ 351 (503)
.+.+|+|-+
T Consensus 341 ~iir~~GW~ 349 (491)
T PF03219_consen 341 NIIRRFGWR 349 (491)
T ss_pred HHHHHhhHH
Confidence 888888876
No 256
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=98.24 E-value=2e-05 Score=74.98 Aligned_cols=109 Identities=19% Similarity=0.198 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHHHHhhhhh---------HHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCC---CchhHHHHHHhHH
Q 010692 104 RLIGVGLSVWTFATAGCGSSF---------DFWSIAICRMLVGVGEASFISLAAPFIDDNAPVP---QKTAWLSMFYMCI 171 (503)
Q Consensus 104 ~~l~~~~~~~~~~~~~~~~~~---------~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~---~r~~~~~~~~~~~ 171 (503)
|+++++.+++.+|.++..++. +.+.++++-.+.++|.|+.-|...++.+|-++++ +|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 567888899999998855542 2367889999999999999999999999999876 3667888999999
Q ss_pred hHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 172 PTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 172 ~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
++|..++..+.+++.++.||.+.|.+.++..++..+..+.-
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~ 122 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSG 122 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999998776666554443
No 257
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.24 E-value=0.0019 Score=60.93 Aligned_cols=126 Identities=10% Similarity=0.056 Sum_probs=89.3
Q ss_pred cccccccCCC---ccchhhHHHHHHH-HHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh--------------
Q 010692 62 TPKRGDFKLN---NFQDGVLSSAFMV-GLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-------------- 123 (503)
Q Consensus 62 ~~i~~~~~~s---~~~~g~~~s~~~~-~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------------- 123 (503)
..+.+.+.++ ++.+.++=+...+ +..+..++.+++.+++.+.+++-.-+..+....+++++.
T Consensus 47 R~lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~ 126 (509)
T COG3202 47 RSLKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEF 126 (509)
T ss_pred HHhhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHH
Confidence 5556766654 4456666677777 677888999999999999999888888888777777763
Q ss_pred -h--------H---------HHHHHHHHHHHHhhhhhhhh-chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHh
Q 010692 124 -F--------D---------FWSIAICRMLVGVGEASFIS-LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 184 (503)
Q Consensus 124 -~--------~---------~~~l~~~r~l~G~g~~~~~~-~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 184 (503)
. + .|..-+.-.+.-+=.+.... .-.....|.+..+|-.|..+.++.+.+++..++..+..+
T Consensus 127 ~~~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt~~eakRFy~lf~l~~ni~lllsg~~~~~ 206 (509)
T COG3202 127 SRDLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITTIEEAKRFYPLFGLGANISLLLSGEVTSW 206 (509)
T ss_pred HHHHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 1 0 12222222222222222222 455677899998999999999999999999999998888
Q ss_pred hcC
Q 010692 185 VGS 187 (503)
Q Consensus 185 l~~ 187 (503)
+.+
T Consensus 207 ~~k 209 (509)
T COG3202 207 LSK 209 (509)
T ss_pred Hhh
Confidence 875
No 258
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=98.24 E-value=0.00033 Score=67.32 Aligned_cols=56 Identities=13% Similarity=0.039 Sum_probs=36.9
Q ss_pred hhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692 377 SSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
++.+..++..++.++..|......+....+.+++++|..+..+...+... |-.+|.
T Consensus 370 ~~d~~~~~~~~l~gltnGy~~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~-Gl~~Gs 425 (437)
T TIGR00939 370 PGDAYFIILMLLFGFSNGYLGSLSMCLAPRQVDPHEREVAGALMVIFLLV-GLALGA 425 (437)
T ss_pred cccHHHHHHHHHHHHhhhHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 34555666677777777766666666777778888887777776555544 544444
No 259
>KOG0254 consensus Predicted transporter (major facilitator superfamily) [General function prediction only]
Probab=98.22 E-value=5.7e-06 Score=82.24 Aligned_cols=133 Identities=17% Similarity=0.107 Sum_probs=103.7
Q ss_pred HHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHH
Q 010692 324 MMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYV 403 (503)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 403 (503)
..+.+...++..++.++.|+++|++||| ..+..+.++..+..++.....+...+.+.=++.|++.+......+.+
T Consensus 92 s~~~s~~~lga~~g~l~~g~l~d~~GRk-----~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy 166 (513)
T KOG0254|consen 92 GLLTSILNLGALVGSLLAGRLGDRIGRK-----KTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVY 166 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhh
Confidence 3666788899999999999999999999 78888888877777777777888888888899999988888888888
Q ss_pred hhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhh-hhHHHHHHHHHHHHHHHHHH
Q 010692 404 CLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHV-NNWRKTTLALTSIFFLAAGI 463 (503)
Q Consensus 404 ~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~ 463 (503)
..|..|++.||...+..+..... |..++ .+.+...+.. .+|+..+....+..++..+.
T Consensus 167 ~sEiap~~~RG~l~~~~~l~~~~-Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~ 225 (513)
T KOG0254|consen 167 ISEIAPAHIRGTLVSLYQLFITI-GILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALG 225 (513)
T ss_pred HhhcCChhhhHHHHHHHHHHHHH-HHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHH
Confidence 88988889999999999877775 77766 4556555443 23775555555544444443
No 260
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.18 E-value=7.7e-08 Score=94.34 Aligned_cols=128 Identities=14% Similarity=0.123 Sum_probs=94.2
Q ss_pred HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh---hHHHHHHHHHHHHHHHhhccchhh
Q 010692 325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS---SLYGFLALFTVGELLVFATQAPVN 401 (503)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 401 (503)
...+...++.++|.++.|++.||+||| +.+..+.++..+..++....+ +.+.+.+.-++.|++.+...+...
T Consensus 50 ~~~~~~~~g~~~G~~~~g~~~d~~GRk-----~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~ 124 (451)
T PF00083_consen 50 LLTSSFFIGAIVGALIFGFLADRYGRK-----PALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP 124 (451)
T ss_pred HHHHHHHhhhccccccccccccccccc-----cccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 455777899999999999999999999 677666666666666666666 777777777888888888888899
Q ss_pred HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhh---hHHHHHHHHHHHHHH
Q 010692 402 YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---NWRKTTLALTSIFFL 459 (503)
Q Consensus 402 ~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---~~~~~~~~~~~~~~~ 459 (503)
.++.|..|++.|+...++.+..... |..++..+. +...... .|+..+.+..+..++
T Consensus 125 ~~~~E~~~~~~R~~~~~~~~~~~~~-G~~~~~~~~-~~~~~~~~~~~Wr~~~~~~~~~~l~ 183 (451)
T PF00083_consen 125 IYISEIAPPKHRGFLSSLFQLFWAL-GILLASLIG-YIVSYYSDNWGWRILLIFGAIPSLL 183 (451)
T ss_pred ccccccccccccccccccccccccc-ccccccccc-ccccccccccccccccccccccccc
Confidence 9999999999999999988766555 777666443 3222222 265555555544433
No 261
>KOG0252 consensus Inorganic phosphate transporter [Inorganic ion transport and metabolism]
Probab=98.03 E-value=2.9e-06 Score=78.28 Aligned_cols=129 Identities=9% Similarity=-0.071 Sum_probs=97.1
Q ss_pred HHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH-H---HHHHHHHHHHHhhhh-hhhhchhhhhhccCCCCCchh
Q 010692 88 VASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-F---WSIAICRMLVGVGEA-SFISLAAPFIDDNAPVPQKTA 162 (503)
Q Consensus 88 ~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~---~~l~~~r~l~G~g~~-~~~~~~~~~i~~~~~~~~r~~ 162 (503)
.+..+...+.|+.|||++.+.|.+++++..+..+...| . ..+++.-.+..+... +-......+-+|.+|.+-|+.
T Consensus 363 PGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t 442 (538)
T KOG0252|consen 363 PGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGPYNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRST 442 (538)
T ss_pred CceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCCcccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhh
Confidence 36667778899999999999999999999999988876 1 112222222222111 122344566799999999999
Q ss_pred HHHHHHhHHhHHHHHHHHHHHhhcC-----cchhHHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 163 WLSMFYMCIPTGVALGYVYGGVVGS-----HLNWRYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 163 ~~~~~~~~~~~G~~~g~~l~~~l~~-----~~gwr~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
.-|+.....-.|.++|...-..+.+ ..+.|+++++.+.+.++..+..++ .||+.
T Consensus 443 ~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~v~~i~~~~~~~gi~~T~l-~pEtk 501 (538)
T KOG0252|consen 443 CHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRNVFIILAGCMLLGILFTLL-IPETK 501 (538)
T ss_pred hhhHHHHhccchHHHHHHHhhHhhhccCCccccchHHHHHHHHHHHHhHheeEE-eeccc
Confidence 9999999999999999999999988 778999999999887666555444 46643
No 262
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.01 E-value=9.9e-05 Score=64.48 Aligned_cols=133 Identities=13% Similarity=0.165 Sum_probs=75.1
Q ss_pred HHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh-
Q 010692 299 NFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL- 376 (503)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 376 (503)
....+.+..|.|.+ ++..+.+..+. .+.....++..+| +..|.+.|++|.+ ..+.++.+............
T Consensus 15 ~Gt~Y~Fs~yS~~L-k~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~-----~~l~iG~~~~~~GY~~~~l~~ 87 (250)
T PF06813_consen 15 SGTTYTFSAYSPQL-KSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPW-----VVLLIGAVLGFVGYGLLWLAV 87 (250)
T ss_pred cCcccchhhhhHHH-HHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 33455666676655 45678886655 4555556666664 7889999999987 55655555555554444332
Q ss_pred h------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692 377 S------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 440 (503)
Q Consensus 377 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 440 (503)
. +.|......++.+.+.............+.+ |++||++.|+.-...++ ++.+-..+...+.
T Consensus 88 ~~~i~~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NF-P~~RG~vvgilk~~~GL-Saai~t~i~~~~f 155 (250)
T PF06813_consen 88 SGRIPSLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNF-PRSRGTVVGILKGFFGL-SAAIFTQIYSAFF 155 (250)
T ss_pred hCccCccchHHHHHHHHHHcccHHHhhhHHHHHHHHhC-ccccCceehhhhHHHHh-HHHHHHHHHHHHc
Confidence 1 2223322233332222222233333344566 46899999999877777 4433333333333
No 263
>PF12832 MFS_1_like: MFS_1 like family
Probab=97.99 E-value=1.4e-05 Score=55.65 Aligned_cols=52 Identities=21% Similarity=0.189 Sum_probs=46.0
Q ss_pred cccccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHH
Q 010692 62 TPKRGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVW 113 (503)
Q Consensus 62 ~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~ 113 (503)
+...++.|+|..|+|.+.++..+...++++++|.++||+|+++.++....++
T Consensus 24 ~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 24 PLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 4445789999999999999999999999999999999999999877766554
No 264
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=97.91 E-value=0.00027 Score=61.88 Aligned_cols=136 Identities=10% Similarity=-0.089 Sum_probs=92.3
Q ss_pred hhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhcc
Q 010692 75 DGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDN 154 (503)
Q Consensus 75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~ 154 (503)
.|.+.-+-.+...+..+.+..+.||+---+=..+..++.+.+..+.+++++.++=+++-.+..++.|.....-.++-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 4555566666677777777788888743333445667778888999999999999999999888888766554444333
Q ss_pred CCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC--cchhHHHHHHHHHHHHHHHHHHHhcccc
Q 010692 155 APVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS--HLNWRYAFWGEAILMLPFAVLAFVIKPL 215 (503)
Q Consensus 155 ~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~--~~gwr~~f~~~~~~~~~~~~~~~~~~p~ 215 (503)
+++ ...+.++.+.+.+.++|..--..+.+ .+.-|...++...+-++.+...++.+++
T Consensus 143 Y~~----~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~ 201 (409)
T KOG3880|consen 143 YPS----IVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKS 201 (409)
T ss_pred CCC----ceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCC
Confidence 332 34555666666666777665555554 3456788888877777777766666643
No 265
>KOG2816 consensus Predicted transporter ADD1 (major facilitator superfamily) [General function prediction only]
Probab=97.86 E-value=0.00055 Score=65.96 Aligned_cols=122 Identities=11% Similarity=0.040 Sum_probs=110.1
Q ss_pred cccccCCCccchhhHHHHHHHHHHHHHhHHH-HhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhh
Q 010692 64 KRGDFKLNNFQDGVLSSAFMVGLLVASPIFA-SLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEAS 142 (503)
Q Consensus 64 i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g-~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~ 142 (503)
+...+++++.+.+.+.+.......+++++.. .+...+|-|+++..|++.-.+...+.+++++.|+++...++.++.. .
T Consensus 268 l~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~-~ 346 (463)
T KOG2816|consen 268 LKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSILGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG-I 346 (463)
T ss_pred EeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-c
Confidence 3778999999999998888888888888888 7777889999999999999999999999999999999999888766 4
Q ss_pred hhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc
Q 010692 143 FISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 186 (503)
Q Consensus 143 ~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 186 (503)
..|...+.++.+.+++++|+++++....-.+...++|.+-+.+.
T Consensus 347 ~~pa~~s~~s~~v~~~e~g~v~~~is~i~~l~~~~~~~~~~~i~ 390 (463)
T KOG2816|consen 347 VFPAIRAFASILVSPEEQGKVFGIISGIEGLSGVVSPALYGNIF 390 (463)
T ss_pred hhHHHHhHHHhhcccccccchhhHHHHHHHHhhhhhHHHHHHHH
Confidence 78889999999999999999999999999999999998877664
No 266
>KOG2325 consensus Predicted transporter/transmembrane protein [General function prediction only]
Probab=97.75 E-value=0.00055 Score=65.33 Aligned_cols=135 Identities=12% Similarity=0.092 Sum_probs=76.3
Q ss_pred HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh----h-hHHHHHHHHHHHHHHHhhccch
Q 010692 325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL----S-SLYGFLALFTVGELLVFATQAP 399 (503)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~ 399 (503)
...+...++..++.++.|+...|.+.-+ +.++.+.+++++..++.... + ..+..++.-++.|++. .....
T Consensus 75 ~viaa~slg~~i~~liF~~Ws~k~~~~k----~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~-~n~a~ 149 (488)
T KOG2325|consen 75 LVIAASSLGHAIFSLIFGIWSNKTGSVK----KPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV-GNFAV 149 (488)
T ss_pred HHHHHHHHHHHhcchhhcccccccCCcc----cCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc-ccHHH
Confidence 4445677899999999999999988521 34444444444444333221 2 3344444444444443 23345
Q ss_pred hhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh------------hhhhHHHHHHHHHHHHHHHHHHHH
Q 010692 400 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD------------HVNNWRKTTLALTSIFFLAAGIWF 465 (503)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~ 465 (503)
.-.++++..-+++|.++.+..+...-+ |.++||.+...+.. .++.|..+-++.++..++..++..
T Consensus 150 lR~Y~a~~s~~~dR~rA~a~~~~~~vl-g~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~ 226 (488)
T KOG2325|consen 150 LRAYIADASTVEDRPRAFAATSGGFVL-GIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIIL 226 (488)
T ss_pred HHHHHHhccCccchHHHHHHhhhHHHH-HHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHHHHHH
Confidence 566677766667888888877543333 77777755433321 112355556666555555554443
No 267
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=97.74 E-value=0.00036 Score=70.47 Aligned_cols=159 Identities=12% Similarity=-0.003 Sum_probs=97.4
Q ss_pred hhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhc-ccccchhhHHHHHHHHHHHHHHHHHHHHhh--
Q 010692 302 IGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQ-MGATISNAFKLLSAATFLGAISCLTAFCLS-- 377 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 377 (503)
++++...+..|+.+..+.+...+ .+........-+..+++|++.|+ +|++ +.+..+.++..+...++....
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~-----~tIl~~~ii~~lG~~llai~a~~ 77 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKF-----KTILYLSIVYVVGHALLSFGAIP 77 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhH-----HHHHHHHHHHHHHHHHHHhccCc
Confidence 34455555666666677775433 22233333344556788999996 5665 555444444444433332211
Q ss_pred ------hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHHHHhhhh----
Q 010692 378 ------SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVN---- 444 (503)
Q Consensus 378 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g---- 444 (503)
.....+..+.+...+.+..-+...+...+.++++ .+.....++....++ |+.+++.+.+++.+..+
T Consensus 78 ~~~~~~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNi-GSlis~~i~~~l~~~~~~fg~ 156 (654)
T TIGR00926 78 SSGHPLHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINA-GSLISTIITPILRGDVGCFGC 156 (654)
T ss_pred ccccchHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhccccc
Confidence 1123445566666777777788888888887653 366778888888888 88888889998875532
Q ss_pred --hHHHHHHHHHHHHHHHHHHHHH
Q 010692 445 --NWRKTTLALTSIFFLAAGIWFV 466 (503)
Q Consensus 445 --~~~~~~~~~~~~~~~~~~~~~~ 466 (503)
+|..+|.+.+++.+++.++...
T Consensus 157 ~~~~~~aF~i~~i~m~ia~lvf~~ 180 (654)
T TIGR00926 157 QDCYPLAFGVPAILMILALIVFMA 180 (654)
T ss_pred CcchHHHHHHHHHHHHHHHHHHHH
Confidence 3666777666666666555443
No 268
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.68 E-value=0.0026 Score=54.97 Aligned_cols=55 Identities=11% Similarity=0.050 Sum_probs=37.8
Q ss_pred CCchhHHHHHHhHHhHHHHHHHHHHHhh---c--CcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 158 PQKTAWLSMFYMCIPTGVALGYVYGGVV---G--SHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 158 ~~r~~~~~~~~~~~~~G~~~g~~l~~~l---~--~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
++|+....+...+.++|.++.-+.--.- . ..-.|++++.+.+++.++-+++..++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~if 61 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIF 61 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5677778888888899987765443221 1 12259999999998877666665555
No 269
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=97.47 E-value=0.0071 Score=56.21 Aligned_cols=110 Identities=14% Similarity=0.009 Sum_probs=54.8
Q ss_pred hccccchhhhhcccch----hhHHHHHh-hhhhhhhchhhhhhhhhcccccchhhHHHHHHHHH-HHHHHHHH-------
Q 010692 306 SYWGPKAGYNIYHMSN----ADMMFGGV-TIVCGIVGTISGGFILDQMGATISNAFKLLSAATF-LGAISCLT------- 372 (503)
Q Consensus 306 ~~~~~~~~~~~~~~~~----~~~~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~-~~~~~~~~------- 372 (503)
....|-+..+..+... .......+ ..+...+|.....++-++-.|. +.+.+.. ...+..+.
T Consensus 263 LsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~------l~i~v~lR~lfiPlF~~cn~~~~ 336 (406)
T KOG1479|consen 263 LSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRK------LTIPVLLRLLFIPLFLLCNYPPL 336 (406)
T ss_pred eEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCce------ehHHHHHHHHHHHHHHHhccCCC
Confidence 3455666555432221 11223333 6677777766666655543232 2221111 11111111
Q ss_pred HHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHH
Q 010692 373 AFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAIST 421 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 421 (503)
.....+.+..+....+.++..|-.....+.+..+.++++++-.+-.+..
T Consensus 337 ~v~~~~~~~~~~l~~~lglsnGYltsl~m~~aPk~v~~~e~e~aG~~m~ 385 (406)
T KOG1479|consen 337 PVVFESDGWFIFLMSLLGLSNGYLTSLIMMYAPKQVKPSEKEAAGNLMV 385 (406)
T ss_pred CceecCchHHHHHHHHHHhccchHhhheehhcCCCCChHHHHHHHHHHH
Confidence 1123455666666677777666555556667777777766655555543
No 270
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=97.44 E-value=0.0058 Score=55.75 Aligned_cols=144 Identities=15% Similarity=0.052 Sum_probs=81.4
Q ss_pred hhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 010692 315 NIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 393 (503)
Q Consensus 315 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (503)
+.+|.+..+. .+.....+.+.+...+.|.+.||+||| +..+...++....++.- ..++.+.+++.=++.|...
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk-----~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaT 135 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRK-----KACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIAT 135 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCch-----HHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHH
Confidence 3577776554 333344456667777889999999999 77776666666666533 3355666666666777766
Q ss_pred hhccchhhHHhh-cc----cCCCCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh-HHHHHHHHHHHHHHHHHHH
Q 010692 394 FATQAPVNYVCL-HS----VKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN-WRKTTLALTSIFFLAAGIW 464 (503)
Q Consensus 394 ~~~~~~~~~~~~-~~----~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~ 464 (503)
...+...-++.. |. +|++..+...+......+.+-++.+..+..++.+..+. ...+|.....+.+++.++.
T Consensus 136 SLLfS~FEsW~V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I 212 (354)
T PF05631_consen 136 SLLFSAFESWMVHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLI 212 (354)
T ss_pred HHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHH
Confidence 655554444433 32 33343444444433122221334445455566665542 3456666666655555443
No 271
>KOG2563 consensus Permease of the major facilitator superfamily [General function prediction only]
Probab=97.23 E-value=0.0034 Score=58.62 Aligned_cols=123 Identities=15% Similarity=0.080 Sum_probs=69.2
Q ss_pred hhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHh--h----hHH--HHH
Q 010692 312 AGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCL--S----SLY--GFL 383 (503)
Q Consensus 312 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~--~~~ 383 (503)
+..+.++.+.....+..++.+.+++..+.+.|+.||+|-| .....+.....+...+=... + ..+ ...
T Consensus 70 ~~~~~Ygs~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR-----~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~ 144 (480)
T KOG2563|consen 70 YVNSFYGSSSAADWLSMIYMVVSVPFGFAAMWILDKFGLR-----TALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTH 144 (480)
T ss_pred HHHHHhcchHHHHHHHHHHHHHHHHHhhHHHHhhcccchH-----HHHHHHHHHHHHHHHHhhhccCccccccchhhhhH
Confidence 5566667444455677788889999999999999999998 55544444444443322221 1 122 222
Q ss_pred HHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692 384 ALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 440 (503)
Q Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 440 (503)
..-.+.....-.....-.-+...-+++++|+++..+..+.+.+ |..++..+.+.+.
T Consensus 145 ~Gq~iaa~Aq~Fim~lPskiA~~WF~~~qra~A~~~~v~~n~L-Gvavg~llppilV 200 (480)
T KOG2563|consen 145 TGQSIAAAAQPFILGLPSKIAAVWFPPDQRAIATVLGVMGNPL-GVAVGFLLPPILV 200 (480)
T ss_pred HhHHHHHHhhhHhhccccHHHHhhCCcchhhhhhhHHHhcchH-HHHHHhhccceec
Confidence 2222222222111111123344457889999999988665545 5555544444443
No 272
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=97.14 E-value=0.029 Score=52.78 Aligned_cols=157 Identities=10% Similarity=-0.063 Sum_probs=93.5
Q ss_pred hhhhhccccchhhhh-cccchhhHH--HHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhh
Q 010692 302 IGAYSYWGPKAGYNI-YHMSNADMM--FGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSS 378 (503)
Q Consensus 302 ~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (503)
+--...++..|+.+. .+.+..+.. +.-+..-..++..+....+.|.++.| .+++...+...+...++....+
T Consensus 19 frPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Yk-----pviil~~~~~i~t~~lll~~~s 93 (412)
T PF01770_consen 19 FRPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYK-----PVIILQALSYIITWLLLLFGTS 93 (412)
T ss_pred cCCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhh-----HHHHHHHHHHHHHHHHHHHHCc
Confidence 334455666777776 777754431 11111123344556778899999998 7777777766666666666667
Q ss_pred HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh-hhhHHHHHHHHHHHH
Q 010692 379 LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH-VNNWRKTTLALTSIF 457 (503)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~-~g~~~~~~~~~~~~~ 457 (503)
....-+.-++.|.... .-...++++-..+++++--++.+......-. |..++..++-.+... ..+|.....+.....
T Consensus 94 v~~mq~~q~~yg~~~a-~evay~sYiys~v~~~~yq~vts~~raa~l~-g~~~s~~lgQllvs~~~~sy~~L~~isl~~~ 171 (412)
T PF01770_consen 94 VLAMQLMQFFYGLATA-AEVAYYSYIYSVVDKEHYQKVTSYTRAATLV-GRFISSLLGQLLVSFGGVSYFQLNYISLASV 171 (412)
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHheeecCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHH
Confidence 6666666666655543 3445567777778887777777777655555 766666555555542 223444444444444
Q ss_pred HHHHHHHH
Q 010692 458 FLAAGIWF 465 (503)
Q Consensus 458 ~~~~~~~~ 465 (503)
.++.+..+
T Consensus 172 ~~a~~~~~ 179 (412)
T PF01770_consen 172 SLALLIAL 179 (412)
T ss_pred HHHHHHHH
Confidence 44444444
No 273
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=97.09 E-value=0.002 Score=62.40 Aligned_cols=143 Identities=13% Similarity=0.004 Sum_probs=107.0
Q ss_pred CCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh----------hhHHHHHHHHHHHHHhh
Q 010692 70 LNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS----------SFDFWSIAICRMLVGVG 139 (503)
Q Consensus 70 ~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~----------~~~~~~l~~~r~l~G~g 139 (503)
.++...|.+..+..++..++..+..+..-+..-|+++....++.++..+.-.. .++.+-.+.--++..+.
T Consensus 252 fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~~ 331 (433)
T PF03092_consen 252 FSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEVI 331 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHHH
Confidence 78888899998899999999999988888888899988888887776664221 12333334455666666
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch--------hHHHHHHHHHHHHHHHHHHHh
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN--------WRYAFWGEAILMLPFAVLAFV 211 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g--------wr~~f~~~~~~~~~~~~~~~~ 211 (503)
....+-....+++|..|+..-|...+++.+..++|..++..++..+.+.++ -.+..++..+..++...+..+
T Consensus 332 ~~i~~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ll~l 411 (433)
T PF03092_consen 332 GMIAFMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLPLLFL 411 (433)
T ss_pred HHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 667777788899999999999999999999999999999999988875443 234555556555444444334
Q ss_pred c
Q 010692 212 I 212 (503)
Q Consensus 212 ~ 212 (503)
+
T Consensus 412 L 412 (433)
T PF03092_consen 412 L 412 (433)
T ss_pred c
Confidence 3
No 274
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=96.95 E-value=0.0054 Score=57.47 Aligned_cols=111 Identities=12% Similarity=0.059 Sum_probs=80.4
Q ss_pred CccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHH--HHHHH---HHHhhhhhHHHHHHHHHHHHHhhhhhhhh
Q 010692 71 NNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLS--VWTFA---TAGCGSSFDFWSIAICRMLVGVGEASFIS 145 (503)
Q Consensus 71 s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~--~~~~~---~~~~~~~~~~~~l~~~r~l~G~g~~~~~~ 145 (503)
...+..+....|.+|-.++.--...+ |+ |++.+.+.+ +..+. ....-+.++.|.+++.-+..|+.+|..++
T Consensus 279 ~r~~Y~~Y~~~YQ~GVFISRSS~~~~--ri--r~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YV 354 (402)
T PF02487_consen 279 PRDQYRWYQLLYQLGVFISRSSLPFF--RI--RRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYV 354 (402)
T ss_pred HHHHHHHHHHHHHHHHhhhhcceeee--eh--hhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHH
Confidence 35567777778887766654322211 33 333333322 22222 22334568999999999999999999999
Q ss_pred chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692 146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 185 (503)
Q Consensus 146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 185 (503)
.....+.|-.++++|..+++....+-++|..++.+++-.+
T Consensus 355 NtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 355 NTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999887554
No 275
>PF12832 MFS_1_like: MFS_1 like family
Probab=96.85 E-value=0.0037 Score=43.47 Aligned_cols=59 Identities=15% Similarity=0.219 Sum_probs=47.8
Q ss_pred HHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccc
Q 010692 293 LGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATI 352 (503)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 352 (503)
...+++......+.-++|.|+++ .|.++.+. .+.++..+..+++.++.|+++||.++++
T Consensus 7 ~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~ 66 (77)
T PF12832_consen 7 AFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRK 66 (77)
T ss_pred HHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccH
Confidence 34566777777888899999987 67776655 5567778899999999999999999983
No 276
>PRK03612 spermidine synthase; Provisional
Probab=96.81 E-value=0.019 Score=56.75 Aligned_cols=140 Identities=11% Similarity=-0.089 Sum_probs=83.3
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHH---HHHHHh----hhhhHH-HHHHHHHHHH
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWT---FATAGC----GSSFDF-WSIAICRMLV 136 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~---~~~~~~----~~~~~~-~~l~~~r~l~ 136 (503)
..-+|-+..+.+.+.+++++|.++|+.+++++.++--++. ..+-+.+.. ++..+. ++...+ ..++..-++.
T Consensus 42 ~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~-~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 42 SYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGF-VAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4456778888899999999999999999998874332222 111111111 111111 111111 2223445566
Q ss_pred HhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHH
Q 010692 137 GVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFA 206 (503)
Q Consensus 137 G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~ 206 (503)
|+..|+..|....+..+... ++-++..|-......+|.++|.++.+++. ..+|-....++.+.+.++.+
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~~-~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a 190 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIRD-QHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAA 190 (521)
T ss_pred HHHHHHHHHHHHHHHHhccc-cchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 77788787777666654322 23567788889999999999999887654 45564434434444433333
No 277
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=96.79 E-value=0.016 Score=46.74 Aligned_cols=100 Identities=7% Similarity=-0.066 Sum_probs=73.2
Q ss_pred HhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchhhHHhhcc
Q 010692 328 GVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLVFATQAPVNYVCLHS 407 (503)
Q Consensus 328 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 407 (503)
.+......+..++.+.+.+++|.| +.++++.+...+.... ....+.+..+....+.|++.+..+...-.++.+.
T Consensus 44 ai~Y~~~~~s~l~~P~iv~~lg~K-----~sm~lg~~~y~~y~~~-~~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~ 117 (156)
T PF05978_consen 44 AILYGSFAISCLFAPSIVNKLGPK-----WSMILGSLGYAIYIAS-FFYPNSYTLYPASALLGFGAALLWTAQGTYLTSY 117 (156)
T ss_pred HHHHHHHHHHHHhHHHHHHHHhhH-----HHHHHHHHHHHHHHHH-HHhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHc
Confidence 455566677788899999999998 6666666555544433 3345667777888888888888888888888887
Q ss_pred cCCCCchhHHHHHHHHHhhcccccchh
Q 010692 408 VKPSLRALSMAISTVSIHIFGDVPSSP 434 (503)
Q Consensus 408 ~~~~~~~~~~g~~~~~~~~~g~~~~~~ 434 (503)
..++.+++-.++....... +.++|..
T Consensus 118 s~~~~~~~~~~ifw~i~~~-s~i~G~~ 143 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQS-SLIFGNL 143 (156)
T ss_pred CCHHHHhhHHHHHHHHHHH-HHHHHHH
Confidence 7778888888888766665 5555543
No 278
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=96.47 E-value=0.17 Score=49.14 Aligned_cols=56 Identities=7% Similarity=-0.051 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhhccc-hhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHH
Q 010692 384 ALFTVGELLVFATQA-PVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQ 440 (503)
Q Consensus 384 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~ 440 (503)
.++...........+ .....+.|...+++..+-.++.....++ |.++++.+..++.
T Consensus 133 ~FYv~~elw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganl-g~i~sg~~~~~~~ 189 (472)
T TIGR00769 133 LFYVMAELWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANV-ALIFSGRTIKYFS 189 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHH
Confidence 333344444444444 3445566667778899999999888888 8888888877776
No 279
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=96.40 E-value=0.12 Score=47.15 Aligned_cols=123 Identities=13% Similarity=0.034 Sum_probs=68.0
Q ss_pred HHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhh------hh------hHHHHHHHHHHH----HHhhhhhhhh
Q 010692 82 FMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCG------SS------FDFWSIAICRML----VGVGEASFIS 145 (503)
Q Consensus 82 ~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~------~~~~~l~~~r~l----~G~g~~~~~~ 145 (503)
-.....+..++.|...|+..|+|++...+.+.-++.++++ +. .++..+..+-++ ..++.=....
T Consensus 72 esgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las~A 151 (503)
T KOG2601|consen 72 ESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLASLA 151 (503)
T ss_pred HHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHHhh
Confidence 3344556777788889999999998887776544444333 21 233333222222 2222222222
Q ss_pred chhhhhhccC----CCCCchhHH---HHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHH
Q 010692 146 LAAPFIDDNA----PVPQKTAWL---SMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLP 204 (503)
Q Consensus 146 ~~~~~i~~~~----~~~~r~~~~---~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~ 204 (503)
....+-.||. ..+.+.... +.....-..-..+.|+..|.+....+-|..-...++-+++
T Consensus 152 ~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 152 GTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred heEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 2222334453 334444443 4444455556788999999998887777655555444444
No 280
>KOG0637 consensus Sucrose transporter and related proteins [Carbohydrate transport and metabolism]
Probab=96.37 E-value=0.045 Score=51.46 Aligned_cols=140 Identities=11% Similarity=0.028 Sum_probs=83.8
Q ss_pred HHHHHHhhhhhccccchhhhhcccc-hhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMS-NADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 374 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
+...++...-..+.|.|++.. |.+ .....+....-+.+++..++.|..+||...|..++|..+........+.+.+..
T Consensus 42 ~Gvqf~wA~elsy~tPyl~~l-Gvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig 120 (498)
T KOG0637|consen 42 AGVQFGWALELSYLTPYLQSL-GVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIG 120 (498)
T ss_pred HHHHHHHHHHhccccHHHHHc-CCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhh
Confidence 333444445567888888874 444 222233334445667778889999998766655555666555554444444333
Q ss_pred Hhhh-----------------HHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh-HHHHHHHHHhhcccccchhhH
Q 010692 375 CLSS-----------------LYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL-SMAISTVSIHIFGDVPSSPLV 436 (503)
Q Consensus 375 ~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~g~~~~~~~~ 436 (503)
.... ....++.+.+.-+.......|.-++..+...++++.+ +++.+..+..+ |+.+|-.+.
T Consensus 121 ~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av-GnvLGY~~g 199 (498)
T KOG0637|consen 121 YAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV-GNVLGYALG 199 (498)
T ss_pred hHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh-cceeeeecc
Confidence 3211 1122333334445555778889999999887765555 88887766666 777665444
Q ss_pred H
Q 010692 437 G 437 (503)
Q Consensus 437 g 437 (503)
+
T Consensus 200 ~ 200 (498)
T KOG0637|consen 200 S 200 (498)
T ss_pred c
Confidence 3
No 281
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=96.24 E-value=0.0012 Score=60.68 Aligned_cols=55 Identities=18% Similarity=0.061 Sum_probs=2.7
Q ss_pred hHHHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccch
Q 010692 378 SLYGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSS 433 (503)
Q Consensus 378 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~ 433 (503)
+.+..++..++.++..|-.....+....+.+++++|..+..+....... |-.+|.
T Consensus 247 ~d~~~~i~~~l~g~TNGyl~tl~m~~~p~~v~~~e~e~aG~~~~~~L~~-Gl~~Gs 301 (309)
T PF01733_consen 247 SDAWFIILMLLFGFTNGYLSTLAMMYAPKSVSPEERELAGSVMSFFLSF-GLFIGS 301 (309)
T ss_dssp --------------------HHHH--------------------------------
T ss_pred chHHHHHHHHHHHHccchhhhceeeeCCCcCCHHHHHHHHHHHHHHHHH-HHHHHH
Confidence 4455566667777777766666677777888887777776666544444 555444
No 282
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=96.23 E-value=0.39 Score=46.14 Aligned_cols=64 Identities=14% Similarity=-0.029 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHhhhhhccccchhhhhcccchh-hHHHHHhhhhhhhhchhhhhhhhhcccccc
Q 010692 289 VVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNA-DMMFGGVTIVCGIVGTISGGFILDQMGATI 352 (503)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 352 (503)
+.+....++..+..-...+-.|.++.+.+..+-. ...+...-.+..++.....|.+.||..|.+
T Consensus 5 ~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~ 69 (432)
T PF06963_consen 5 WRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLK 69 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchh
Confidence 3445556666666666666667777776543421 123334445566667777788899988764
No 283
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=96.07 E-value=0.00092 Score=66.18 Aligned_cols=122 Identities=13% Similarity=0.081 Sum_probs=0.4
Q ss_pred hhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh-------------
Q 010692 312 AGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS------------- 377 (503)
Q Consensus 312 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 377 (503)
-++..++++.... .+.+..-++.++..++..++.+|-.|. +++..+.++..+..++....+
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrp-----rwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~ 102 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRP-----RWIGIGALLMGLGSLLFALPHFLSGPYSYEEASN 102 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCc-----ceeeecHHHHHHHHHHHhccHhhcCCCccccccc
Confidence 4566678876544 555666677777777777777764443 455444444443333322110
Q ss_pred ---------------------------------hHHHHHHHHHHHHHHHh----hccchhhHHhhcccCCCCchhHHHHH
Q 010692 378 ---------------------------------SLYGFLALFTVGELLVF----ATQAPVNYVCLHSVKPSLRALSMAIS 420 (503)
Q Consensus 378 ---------------------------------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~ 420 (503)
........+++..+..+ ..++...+++-|.++++..+...|+.
T Consensus 103 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~~~~splYiGi~ 182 (539)
T PF03137_consen 103 SNGNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVSKKNSPLYIGIL 182 (539)
T ss_dssp -------------------------------------------------SSS----------------------------
T ss_pred cccccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccccccCccchhhh
Confidence 01112233333334444 44455566677778888888888887
Q ss_pred HHHHhhcccccchhhHHHH
Q 010692 421 TVSIHIFGDVPSSPLVGVL 439 (503)
Q Consensus 421 ~~~~~~~g~~~~~~~~g~l 439 (503)
.....+ |-++|-.+++..
T Consensus 183 ~~~~~l-GPa~Gf~lg~~~ 200 (539)
T PF03137_consen 183 YAMSIL-GPALGFLLGSFC 200 (539)
T ss_dssp -------------------
T ss_pred hHHhhc-cHHHHHHHHHHH
Confidence 654444 555554444544
No 284
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=95.93 E-value=0.19 Score=45.94 Aligned_cols=113 Identities=17% Similarity=0.112 Sum_probs=67.6
Q ss_pred HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhh--hHHHHHHHHHHHHHHHhhccchhhH
Q 010692 325 MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLS--SLYGFLALFTVGELLVFATQAPVNY 402 (503)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 402 (503)
.......+...++.++.|.+.||.||| +.............+...... ..+.........+.+.+...+....
T Consensus 43 ~~~~~~~~~~~~~~~~~g~l~d~~g~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 117 (338)
T COG0477 43 LLLSAFFLGYAIGSLLAGPLGDRYGRR-----KVLIIGLLLFLLGTLLLALAPNVGLALLLILRLLQGLGGGGLLPVASA 117 (338)
T ss_pred HHHHHHHHHHHHHhhhhhhccccccch-----HHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 344455566666779999999999887 343333322122222222222 2344444444455666666677777
Q ss_pred HhhcccCC-CCchhHHHHHHHHHhhcccccchhhHHHHHhh
Q 010692 403 VCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDH 442 (503)
Q Consensus 403 ~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~ 442 (503)
+..+..++ +.|+...+.........|..++|.+.+.+.+.
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (338)
T COG0477 118 LLSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGA 158 (338)
T ss_pred HHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888776 57888888876633333777777666666654
No 285
>KOG3098 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.91 E-value=0.13 Score=49.48 Aligned_cols=103 Identities=14% Similarity=0.193 Sum_probs=77.5
Q ss_pred HHHHHHHHHhHHHHhh---hhcCCchhHHHHHHHHHHHHHHhhhh------------------hHHHHHHHHHHHHHhhh
Q 010692 82 FMVGLLVASPIFASLA---KSHNPFRLIGVGLSVWTFATAGCGSS------------------FDFWSIAICRMLVGVGE 140 (503)
Q Consensus 82 ~~~~~~~~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~g~ 140 (503)
..++..++..+.+.+. +++||++.+.++..+..++.++.-.. +++...++.-++.|++-
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 3344444455555555 56799999999999888887776442 35677888999999999
Q ss_pred hhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692 141 ASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 185 (503)
Q Consensus 141 ~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 185 (503)
+......+.++.+.+ +++|..+.++...-..++..++.......
T Consensus 368 ~~~~t~~~~ii~~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~~~ 411 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLY-PDDRAQAFSLFKFYQSVASCVAFFFSPYL 411 (461)
T ss_pred HHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 999999999999999 55688888888888888777666554443
No 286
>PRK03612 spermidine synthase; Provisional
Probab=95.64 E-value=0.45 Score=47.24 Aligned_cols=57 Identities=9% Similarity=-0.083 Sum_probs=31.8
Q ss_pred HHHHHHHhhccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh-hhhh
Q 010692 387 TVGELLVFATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD-HVNN 445 (503)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~-~~g~ 445 (503)
++.+++.|+..|....+..+.. .+..+...|-.+....+ |+++|.++.+++.- ..|.
T Consensus 118 ~~~~~l~G~~~Pl~~~~~~~~~-~~~~g~~~g~ly~~ntl-Ga~~G~l~~~~vLlp~lG~ 175 (521)
T PRK03612 118 LLIGLLIGMEIPLLMRILQRIR-DQHLGHNVATVLAADYL-GALVGGLAFPFLLLPRLGL 175 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-ccchhhhhhhhHhHHhH-HHHHHHHHHHHHHHHhcch
Confidence 3445556666555444443322 22345555666555555 88888888777643 5553
No 287
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=95.56 E-value=0.92 Score=44.46 Aligned_cols=56 Identities=11% Similarity=0.025 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhccchhh-HHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHh
Q 010692 385 LFTVGELLVFATQAPVN-YVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQD 441 (503)
Q Consensus 385 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~ 441 (503)
+++..-.......+.+. ..+.+....++..+-.++.....++ |.++++.+..++.+
T Consensus 149 fYv~aElwgsvvlSlLFW~fAN~itt~~eAKRfYpl~g~gani-gli~sG~~~~~~~~ 205 (491)
T PF03219_consen 149 FYVMAELWGSVVLSLLFWGFANEITTVEEAKRFYPLFGLGANI-GLIFSGQLTSYFSS 205 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 33333333333344333 3444555568899999999888888 77777766666665
No 288
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=94.49 E-value=0.13 Score=36.24 Aligned_cols=76 Identities=16% Similarity=0.113 Sum_probs=52.2
Q ss_pred HhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhH
Q 010692 301 VIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSL 379 (503)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (503)
+-+.++..+|...++ .+++..+. .+.+...++..+|.+...++.++..++ +.+..+.+......+.....++.
T Consensus 7 gRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~-----~~~~~~l~~~~~~~~~ma~~~~~ 80 (85)
T PF06779_consen 7 GRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPR-----RLLRAGLLLTVLSTAAMALTHSF 80 (85)
T ss_pred HHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH-----HHHHHHHHHHHHHHHHHHHHhch
Confidence 344556677766555 67776554 677888899999999999888875555 66666666666666666655555
Q ss_pred HHH
Q 010692 380 YGF 382 (503)
Q Consensus 380 ~~~ 382 (503)
+.+
T Consensus 81 ~~w 83 (85)
T PF06779_consen 81 WLW 83 (85)
T ss_pred HHH
Confidence 443
No 289
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=93.78 E-value=0.27 Score=46.76 Aligned_cols=84 Identities=14% Similarity=0.034 Sum_probs=65.5
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCC---CchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHH
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPS---LRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSI 456 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~ 456 (503)
..+.+.+.+...+.++.=+....+..+.++++ .+.....+.+...++ |..+++.+.+++.++.| |...|.+.++.
T Consensus 34 ~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~in~-G~~~~~~~~~~i~~~~~-~~~~f~i~~~~ 111 (372)
T PF00854_consen 34 GLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGINI-GSLFSPTLVPYIQQNYG-WFLGFGIPAIG 111 (372)
T ss_dssp CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHHHH-HHHHHHHCCCHHHHCS--HHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHHhh-hhHhhcccchhhccccc-hhhhhhHHHHH
Confidence 35566667777888888889999999988775 456677777888888 99889989999998877 87888888877
Q ss_pred HHHHHHHHH
Q 010692 457 FFLAAGIWF 465 (503)
Q Consensus 457 ~~~~~~~~~ 465 (503)
.+++.+.+.
T Consensus 112 ~~~~~~~f~ 120 (372)
T PF00854_consen 112 MLLALIVFL 120 (372)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 776666554
No 290
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=93.62 E-value=0.82 Score=44.31 Aligned_cols=107 Identities=12% Similarity=0.031 Sum_probs=72.7
Q ss_pred hHHHHHHHHHHHHHhHHHHhhhhcCCc--hhHHHHH--HHHHHHHHHhh---------hhhHHHHHHHHHHHHHhhhhhh
Q 010692 77 VLSSAFMVGLLVASPIFASLAKSHNPF--RLIGVGL--SVWTFATAGCG---------SSFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 77 ~~~s~~~~~~~~~~~~~g~l~dr~Grr--~~l~~~~--~~~~~~~~~~~---------~~~~~~~l~~~r~l~G~g~~~~ 143 (503)
.....|.++-.+|..+..+.. .-++| ++.+.+. +++.-..++|. +-++-+..++.-++.|+..|-.
T Consensus 311 i~~~~fNvgD~vGR~~~~~~~-~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 311 ICFLLFNLFDWLGRSLTSKFM-WPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHhhhhheeE-eeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 456677777777777554331 11333 3332221 12222223332 2246677778899999999999
Q ss_pred hhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHh
Q 010692 144 ISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 184 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 184 (503)
...+..+..+..++++|..+-.+...+..+|..+|..++-.
T Consensus 390 ~s~~m~~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l~~~ 430 (437)
T TIGR00939 390 GSLSMCLAPRQVDPHEREVAGALMVIFLLVGLALGAVLSFL 430 (437)
T ss_pred HHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 98899999999999999999999999999999998887643
No 291
>KOG3626 consensus Organic anion transporter [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.43 E-value=0.49 Score=48.04 Aligned_cols=70 Identities=14% Similarity=0.044 Sum_probs=39.0
Q ss_pred hccchhhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHHHHHhh------------------hhhHHHHHHHHHHH
Q 010692 395 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVGVLQDH------------------VNNWRKTTLALTSI 456 (503)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~------------------~g~~~~~~~~~~~~ 456 (503)
..++...+++-|.+.+++.+...|+.+.+.-+ |=++|-.+++..... .|.|-..|++.+.+
T Consensus 253 pi~tlGisYiDDnvk~~~SplYlgi~~~~~~l-GPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~ 331 (735)
T KOG3626|consen 253 PIFTLGISYIDDNVKKKNSPLYLGILYSMAIL-GPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGAL 331 (735)
T ss_pred CCccCCCccccccccccCCcHHHHHHHHHHHh-hhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHH
Confidence 44445555666666667888888888644333 555444444444321 14454555666665
Q ss_pred HHHHHHHHH
Q 010692 457 FFLAAGIWF 465 (503)
Q Consensus 457 ~~~~~~~~~ 465 (503)
.++.++.++
T Consensus 332 ~~~~a~p~f 340 (735)
T KOG3626|consen 332 LLFSAVPLF 340 (735)
T ss_pred HHHHHHHHH
Confidence 555555444
No 292
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=92.78 E-value=3.9 Score=37.18 Aligned_cols=74 Identities=7% Similarity=0.125 Sum_probs=57.2
Q ss_pred HHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccC
Q 010692 81 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNA 155 (503)
Q Consensus 81 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~ 155 (503)
...+..+..+++.+.+..++|-|+++.++...+... +..-+=+.+..++-.-...|+|.+..+..--+|+++.-
T Consensus 66 ~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly-iA~Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 66 ALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY-IAANLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred hhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH-HHhhcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 344555667777779999999999999988877543 23334467888999999999999999988777777664
No 293
>KOG4332 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=92.49 E-value=2.3 Score=37.39 Aligned_cols=136 Identities=14% Similarity=0.030 Sum_probs=85.4
Q ss_pred hhhHHHHHHHHHHHHHhHHHHhhhhcCCch--hHHHHHHHHHHHHHHhhhh----h---HHHHHHHHHHHHHhhhhhhhh
Q 010692 75 DGVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSS----F---DFWSIAICRMLVGVGEASFIS 145 (503)
Q Consensus 75 ~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~----~---~~~~l~~~r~l~G~g~~~~~~ 145 (503)
.|.+.+.++++..+|+-+..++..|-..|- .+.+..++.++...+..+. + +...=+++-.+.-.+.|.++|
T Consensus 284 hGfiFatFMlASmLGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwP 363 (454)
T KOG4332|consen 284 HGFIFATFMLASMLGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWP 363 (454)
T ss_pred chhHHHHHHHHHHHhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcch
Confidence 589999999999999999999888765543 4444444444443333221 1 122224455555567788999
Q ss_pred chhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692 146 LAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 146 ~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
....+=+++.|++.|+..+.++..-.++=..++-..--.-....+-|..|-++.+...+..+...
T Consensus 364 SimkmRsqyIPEearstimNfFRvPLnifvClvLynlh~~~~p~~tr~mf~icS~~~~~a~i~~~ 428 (454)
T KOG4332|consen 364 SIMKMRSQYIPEEARSTIMNFFRVPLNIFVCLVLYNLHVDAFPTTTRNMFGICSAFLFVASILQR 428 (454)
T ss_pred HHHHHHHhhCCHHHHhhhhhheechhhHhhhhhheecccccCccccchhhhhhHHHHHHHHHHHH
Confidence 99999999999999999888877655443222211100001123567788887776665554443
No 294
>KOG1479 consensus Nucleoside transporter [Nucleotide transport and metabolism]
Probab=92.44 E-value=1.3 Score=41.75 Aligned_cols=35 Identities=9% Similarity=-0.065 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHhhccchhhHHhhcccCCCCchh
Q 010692 380 YGFLALFTVGELLVFATQAPVNYVCLHSVKPSLRAL 415 (503)
Q Consensus 380 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (503)
...++..++.+.+.+...+..+.. ...+|++....
T Consensus 118 ~vt~~~vv~~~~a~a~~qgs~~G~-a~~~P~~ytqa 152 (406)
T KOG1479|consen 118 LVTLIIVVLLNLANAVVQGSLYGL-AGLFPSEYTQA 152 (406)
T ss_pred HHHHHHHHHHhhhhhhhccchhhh-hhcCCHHHHHH
Confidence 344445555555555555555544 44567765443
No 295
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=91.58 E-value=1.5 Score=42.27 Aligned_cols=37 Identities=19% Similarity=0.077 Sum_probs=20.4
Q ss_pred hhHHhhcccCCCCchhHHHHHHHHHhhcccccchhhHH
Q 010692 400 VNYVCLHSVKPSLRALSMAISTVSIHIFGDVPSSPLVG 437 (503)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~g 437 (503)
+-.+......+++++-|..-.....+. |.+++-.++-
T Consensus 139 VDGWALT~Ls~~n~~~ASTcqtvG~~~-Gyfls~tvFl 175 (544)
T PF13000_consen 139 VDGWALTMLSPENVGYASTCQTVGQTA-GYFLSFTVFL 175 (544)
T ss_pred eehhhhhhcChhhcchHHHHHHhHhhh-hHHHHHHHHH
Confidence 444555566777777766554333344 6665544443
No 296
>KOG3574 consensus Acetyl-CoA transporter [Inorganic ion transport and metabolism]
Probab=89.36 E-value=3.1 Score=38.72 Aligned_cols=63 Identities=13% Similarity=-0.022 Sum_probs=31.9
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhh-----cccccc
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILD-----QMGATI 352 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~ 352 (503)
+.+..+...+..++.-.... .-+|.+++. .+.+..+. .+....+ ... --++...++| |+|||+
T Consensus 31 ~~illLl~LYllQGiP~GL~-~~iP~lL~a-k~vSyt~~a~fS~ay~-P~s-LKllWaPiVDs~y~k~~Grrk 99 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLI-GAIPLLLQA-KGVSYTSQAIFSFAYW-PFS-LKLLWAPIVDSVYSKRFGRRK 99 (510)
T ss_pred hhHHHHHHHHHHcCCchhHh-hhhHHHhcC-CCcchhhhhhhhhhhh-HHH-HHHHHHhhhHHHHHHhhcccc
Confidence 34444444455555444443 478888874 45553222 2221111 111 1356667777 999985
No 297
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=87.04 E-value=18 Score=30.94 Aligned_cols=119 Identities=9% Similarity=0.062 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhHHHHhh---hhcCCchhHHHHHHHHHHHHHHhhh----hhH----HHHHHHHHHHHHhhhhhhhh--
Q 010692 79 SSAFMVGLLVASPIFASLA---KSHNPFRLIGVGLSVWTFATAGCGS----SFD----FWSIAICRMLVGVGEASFIS-- 145 (503)
Q Consensus 79 ~s~~~~~~~~~~~~~g~l~---dr~Grr~~l~~~~~~~~~~~~~~~~----~~~----~~~l~~~r~l~G~g~~~~~~-- 145 (503)
.....+++.+|...++.+. ++..+|+.....+.+-++..+..++ .++ +......-+.+|+=.+...-
T Consensus 52 ~~~~i~~F~~G~~~~~~i~~~~~~~~~~~~~~~~l~~~~~ll~~~~~~~~~~~~~~~~~~~~~~lafamg~Qn~~~~~~~ 131 (209)
T PF06912_consen 52 YLLAILSFILGAFLAGLIVRRSRRRRRRRWYRILLLLEAILLLIAALLPPAFPPHGHRILAIFLLAFAMGMQNAAFRRLG 131 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3455556666666666662 3334444444444443333333322 233 44455555555543322210
Q ss_pred -----------ch---hhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHH
Q 010692 146 -----------LA---APFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWG 197 (503)
Q Consensus 146 -----------~~---~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~ 197 (503)
.. ..-+.|+...+++.+.-.......-++..+|..+++.+.+..+.+..+..
T Consensus 132 g~~~~Tt~~TG~l~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~al~~~ 197 (209)
T PF06912_consen 132 GVSIRTTFMTGNLTDLGIDLARYLRGKDRALRRALRYLLIILSFFIGAILGALLYRRLGFWALLLP 197 (209)
T ss_pred CCcccchhhHhhHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 11 11122433344443444455556666667777777777776675433333
No 298
>KOG3880 consensus Predicted small molecule transporter involved in cellular pH homeostasis (Batten disease protein in human) [General function prediction only]
Probab=85.72 E-value=2.8 Score=37.70 Aligned_cols=117 Identities=9% Similarity=0.039 Sum_probs=78.7
Q ss_pred ccccCCCc-cchhhHHHHHHHHHHHHHhHHHHhhhhcCCch-----hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHh
Q 010692 65 RGDFKLNN-FQDGVLSSAFMVGLLVASPIFASLAKSHNPFR-----LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGV 138 (503)
Q Consensus 65 ~~~~~~s~-~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~-----~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 138 (503)
.+.+..+. +|.-|....|.+|-.+..--. .-+--+. ++-.-.+++.+...+..+.+++|..++.-+.-|+
T Consensus 279 ~~g~sls~~sqYRwyqvlYQlGVFiSRSS~----~~~~~p~l~~LailQ~vNl~ff~~~a~~~ftpsi~ivf~lI~~EGL 354 (409)
T KOG3880|consen 279 SHGFSLSKDSQYRWYQVLYQLGVFISRSSI----NLFTMPYLWLLAILQFVNLLFFLLQAWYWFTPSIWIVFALILFEGL 354 (409)
T ss_pred ccCCccchhhcchhhheeeeeeEEEEeccc----eEEechHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 34455543 457788888877654432111 1111111 1222233444455566778999999999999998
Q ss_pred hhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692 139 GEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 185 (503)
Q Consensus 139 g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 185 (503)
-+|..++...--+.+-.++++|-.+|+....+-++|..++..++-.+
T Consensus 355 lGGasYVNTf~~i~~e~~pd~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 355 LGGASYVNTFHNIHKETEPDVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred cCchHHHHHHHHHhhcCCchHHHHhHhhheecchhhHHHHHHHhccc
Confidence 77778877777777777888999999999999999998887776443
No 299
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=82.77 E-value=45 Score=31.81 Aligned_cols=23 Identities=17% Similarity=0.248 Sum_probs=14.8
Q ss_pred HHHHHHHhhhhhHHHHHHHHHHH
Q 010692 276 SQDTKVLLQEKVYVVNVLGYIAY 298 (503)
Q Consensus 276 ~~~~~~~~~~~~~~~~~~~~~~~ 298 (503)
.+..++.+++|..+...++....
T Consensus 235 ~~~~~~~~~nP~~~a~~lgli~~ 257 (385)
T PF03547_consen 235 KKSILKLFKNPPLIAIILGLIIG 257 (385)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHH
Confidence 34456777888888776654443
No 300
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=82.51 E-value=6.8 Score=28.65 Aligned_cols=41 Identities=7% Similarity=-0.052 Sum_probs=28.5
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHHH
Q 010692 76 GVLSSAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTFA 116 (503)
Q Consensus 76 g~~~s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~~ 116 (503)
+.-.+.-+++..+.....||+.||| |.++..++..++.+.+
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPwglIv~lllGf~ 86 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPWGLIVFLLLGFG 86 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHH
Confidence 4445666777777777889999998 7777666555554433
No 301
>KOG4830 consensus Predicted sugar transporter [Carbohydrate transport and metabolism]
Probab=80.57 E-value=0.29 Score=42.33 Aligned_cols=43 Identities=9% Similarity=-0.030 Sum_probs=31.0
Q ss_pred HHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccch
Q 010692 279 TKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSN 321 (503)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (503)
+...|++-.+....+.+++.-...+....|++.|..+..+.+.
T Consensus 194 W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~q 236 (412)
T KOG4830|consen 194 WTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQ 236 (412)
T ss_pred chhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHH
Confidence 4455677777777777777777777777888888877766664
No 302
>KOG3810 consensus Micronutrient transporters (folate transporter family) [Coenzyme transport and metabolism]
Probab=80.50 E-value=8.5 Score=35.51 Aligned_cols=131 Identities=15% Similarity=0.039 Sum_probs=90.3
Q ss_pred hhHHHHHHHHHHHHHhHHHHhhhhcCCch--hHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhc
Q 010692 76 GVLSSAFMVGLLVASPIFASLAKSHNPFR--LIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGEASFISLAAPFIDD 153 (503)
Q Consensus 76 g~~~s~~~~~~~~~~~~~g~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~ 153 (503)
|..-++..+..+++.+..|++--++.|.. .+.++.+.-+...++++-++++|..+++-++.+.-.....+.+..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 66778888899999999999987776653 4555555566666667778899998888888887777788888888888
Q ss_pred cCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcch-----------hHHHHHHHHHHHHHHHHHH
Q 010692 154 NAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLN-----------WRYAFWGEAILMLPFAVLA 209 (503)
Q Consensus 154 ~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g-----------wr~~f~~~~~~~~~~~~~~ 209 (503)
....+.-|..+|+.... +.++=.++.....+.-| +..-|.+.+++.++.....
T Consensus 354 nL~~e~~gLvFGiNTFv---Al~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~ 417 (433)
T KOG3810|consen 354 NLSSELFGLVFGINTFV---ALILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIE 417 (433)
T ss_pred hhhhhhheeeeehHHHH---HHHHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHH
Confidence 88888788888877653 33344444433343111 2234556666555554443
No 303
>KOG1237 consensus H+/oligopeptide symporter [Amino acid transport and metabolism]
Probab=80.17 E-value=11 Score=37.99 Aligned_cols=165 Identities=11% Similarity=-0.038 Sum_probs=87.2
Q ss_pred HHHHHHhhhhhccccchhhhhcccchhhH-HHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHH
Q 010692 296 IAYNFVIGAYSYWGPKAGYNIYHMSNADM-MFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISCLTAF 374 (503)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
.+-..+++++...+-.|+...++.....+ -.............+++++++|-+--|. +.+.++.++......++.
T Consensus 47 ~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry----~tI~~~s~i~~~G~~~lt 122 (571)
T KOG1237|consen 47 VLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRY----FTINIGSLISLLGLFGLT 122 (571)
T ss_pred HHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHH----HHHHHHHHHHHHHHHHHH
Confidence 34444555555555566766666664332 2333444555666788999999754332 444444444333322221
Q ss_pred Hhh----------------------hH---HHHHHHHHHHHHHHhhccchhhHHhhcccC---C-C--CchhHHHHHHHH
Q 010692 375 CLS----------------------SL---YGFLALFTVGELLVFATQAPVNYVCLHSVK---P-S--LRALSMAISTVS 423 (503)
Q Consensus 375 ~~~----------------------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-~--~~~~~~g~~~~~ 423 (503)
... +. ..+...+.+...+.++.-+...+.-.+.++ + + ....-+.+....
T Consensus 123 ~~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~ 202 (571)
T KOG1237|consen 123 LSAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFS 202 (571)
T ss_pred HHHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHH
Confidence 110 00 111222222333444556677777777777 3 2 222455555555
Q ss_pred HhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHH
Q 010692 424 IHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAGIWFV 466 (503)
Q Consensus 424 ~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 466 (503)
.+. |..++-.+..++-+..+ |...|-+..++..++.++++.
T Consensus 203 ~~~-g~l~a~t~~vyiq~~~~-w~lgf~i~~~~~~lai~iF~~ 243 (571)
T KOG1237|consen 203 QNG-GALLAQTVLVYIQDNVG-WKLGFGIPTVLNALAILIFLP 243 (571)
T ss_pred HHH-HHHHHHHHHHhhhhccc-ceeeccHHHHHHHHHHHHHHc
Confidence 566 66666666666656554 777777776666666555543
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=77.15 E-value=0.76 Score=42.33 Aligned_cols=107 Identities=15% Similarity=0.070 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHHhHHHHhhhh-cCCchhHHHHH--HHHHHHHHHh----------hhhhHHHHHHHHHHHHHhhhhhhh
Q 010692 78 LSSAFMVGLLVASPIFASLAKS-HNPFRLIGVGL--SVWTFATAGC----------GSSFDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 78 ~~s~~~~~~~~~~~~~g~l~dr-~Grr~~l~~~~--~~~~~~~~~~----------~~~~~~~~l~~~r~l~G~g~~~~~ 144 (503)
....|.++-.+|..+.++.-=+ -.+|++.+.+. +++.-..++| .+.+|-+..++.-++.|+..|-..
T Consensus 187 ~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl~ 266 (309)
T PF01733_consen 187 LFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYLS 266 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchhh
Confidence 4567888888888877764211 13444433211 1222222222 123455777888999999999999
Q ss_pred hchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHh
Q 010692 145 SLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGV 184 (503)
Q Consensus 145 ~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~ 184 (503)
.....+..+..++++|..+-.+......+|..+|..++-.
T Consensus 267 tl~m~~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~ls~~ 306 (309)
T PF01733_consen 267 TLAMMYAPKSVSPEERELAGSVMSFFLSFGLFIGSVLSFL 306 (309)
T ss_dssp HHHH------------------------------------
T ss_pred hceeeeCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999888888888998888877643
No 305
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=73.95 E-value=24 Score=33.68 Aligned_cols=14 Identities=29% Similarity=0.498 Sum_probs=7.6
Q ss_pred hchhhhhhhhhccc
Q 010692 336 VGTISGGFILDQMG 349 (503)
Q Consensus 336 ~~~~~~g~l~d~~~ 349 (503)
+.....|++..|.+
T Consensus 10 ~~ii~~G~~~~~~~ 23 (385)
T PF03547_consen 10 FLIILLGYLLGRFG 23 (385)
T ss_pred HHHHHHHHHHHHhC
Confidence 33445566666654
No 306
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=71.42 E-value=14 Score=27.13 Aligned_cols=34 Identities=15% Similarity=0.215 Sum_probs=22.5
Q ss_pred CCchhHHHHHHHHHhhcccccchhhHHHHHhhhhh
Q 010692 411 SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNN 445 (503)
Q Consensus 411 ~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~ 445 (503)
+.++.+.++-.. ..++++++-....||+.|++-+
T Consensus 38 s~k~~~~a~kls-sefIsGilVGa~iG~llD~~ag 71 (116)
T COG5336 38 SIKGYAQAFKLS-SEFISGILVGAGIGWLLDKFAG 71 (116)
T ss_pred hhhhhhhhHHHH-HHHHHHHHHHHHHHHHHHHhcC
Confidence 456677776643 4444666666788999997643
No 307
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=71.34 E-value=57 Score=28.95 Aligned_cols=99 Identities=11% Similarity=0.043 Sum_probs=50.1
Q ss_pred hHHHHHHHHHHHHHhHHHHhhh-hcCCchhHH----HHHHHHHHHHHHhhh-h----hHHHHHHHHHHHHHhhhhhhhhc
Q 010692 77 VLSSAFMVGLLVASPIFASLAK-SHNPFRLIG----VGLSVWTFATAGCGS-S----FDFWSIAICRMLVGVGEASFISL 146 (503)
Q Consensus 77 ~~~s~~~~~~~~~~~~~g~l~d-r~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~g~~~~~~~ 146 (503)
...-++..|+.+|....|+... .+.||+.+. .+.+++.+..+..+. . .++..+++.-++.|.+.=+..++
T Consensus 145 ~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~V 224 (267)
T PF07672_consen 145 IFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQGV 224 (267)
T ss_pred HHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhHH
Confidence 3344555666666677777765 445666443 334444444444211 1 24667888888888765444443
Q ss_pred hhhhhhccCCCCCchhHHHHHHhHHhHHHH
Q 010692 147 AAPFIDDNAPVPQKTAWLSMFYMCIPTGVA 176 (503)
Q Consensus 147 ~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~ 176 (503)
...+=-| ++..++.+.--.++..+++|.+
T Consensus 225 iL~lPhE-yK~~~pk~ig~~Fg~iWGfGY~ 253 (267)
T PF07672_consen 225 ILNLPHE-YKGYNPKKIGIQFGLIWGFGYI 253 (267)
T ss_pred HhcChhh-hcCCCcceehhHHHHHHHHHHH
Confidence 3333333 3333333333334444555544
No 308
>COG4769 Predicted membrane protein [Function unknown]
Probab=70.95 E-value=11 Score=30.20 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhhh
Q 010692 81 AFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLVGVGE 140 (503)
Q Consensus 81 ~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g~ 140 (503)
.+....++.+...-++..++|+|.+-.+|.... .++.+|..++.+.+++.|-..
T Consensus 81 l~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~m------GaF~hNl~QLivas~Lv~~~~ 134 (181)
T COG4769 81 LYSFAGAILSTLFMYFLYQFGPKYLSLLGISVM------GAFTHNLGQLIVASFLVFTTS 134 (181)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCceEeeeehhhH------HHHHHhHHHHHHHHHHHhcch
Confidence 455666677777788899999999866665433 467899999999999987443
No 309
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=69.87 E-value=96 Score=28.94 Aligned_cols=143 Identities=12% Similarity=0.009 Sum_probs=81.6
Q ss_pred CCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHH----HH-hhhh----hHHHHHHHHHHHHHhh
Q 010692 69 KLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFAT----AG-CGSS----FDFWSIAICRMLVGVG 139 (503)
Q Consensus 69 ~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~----~~-~~~~----~~~~~l~~~r~l~G~g 139 (503)
|-+--|.+.+.+.|...+.+|+...-++.|.--.-+.+..-+++..++. ++ ..|+ ++-+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 4456788999999999999999998888875433322222222222211 11 1333 4567888899999999
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc-CcchhHHHHHHHHHHHHHHHHHHHhcc
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG-SHLNWRYAFWGEAILMLPFAVLAFVIK 213 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~-~~~gwr~~f~~~~~~~~~~~~~~~~~~ 213 (503)
.|.-.|....++..-. .+-....+.....-.+|...+.++-.++. ...|---.-...+.+.++.+++..+.+
T Consensus 119 VG~EiPL~mrml~~r~--a~~k~~~s~vl~~DYLGal~~gLl~p~lllP~LGl~rta~laG~~Nl~aAvv~~fll 191 (508)
T COG4262 119 VGAEIPLLMRMLQRRQ--AKAKDLGSRVLTLDYLGALAGGLLWPFLLLPRLGLVRTAALAGLCNLAAAVVTLFLL 191 (508)
T ss_pred HhcchHHHHHHHHHHH--HHHHhhhhhhhhhHhhhhhhHHHHHHHHHhhhhccHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888887621 11112222222335566666655544432 333432223344555555554444443
No 310
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=69.10 E-value=11 Score=30.43 Aligned_cols=11 Identities=9% Similarity=0.129 Sum_probs=4.7
Q ss_pred HHHHHHHHHHH
Q 010692 448 KTTLALTSIFF 458 (503)
Q Consensus 448 ~~~~~~~~~~~ 458 (503)
.+++++.++..
T Consensus 96 R~~~Vl~g~s~ 106 (163)
T PF06679_consen 96 RALYVLVGLSA 106 (163)
T ss_pred hhHHHHHHHHH
Confidence 34444444433
No 311
>KOG2881 consensus Predicted membrane protein [Function unknown]
Probab=63.28 E-value=29 Score=30.32 Aligned_cols=18 Identities=22% Similarity=0.565 Sum_probs=9.8
Q ss_pred chhHHHHHHHHHHHHHHH
Q 010692 189 LNWRYAFWGEAILMLPFA 206 (503)
Q Consensus 189 ~gwr~~f~~~~~~~~~~~ 206 (503)
+.=++.+++.+++.++..
T Consensus 127 ipr~~T~~~~t~LF~iFG 144 (294)
T KOG2881|consen 127 IPRKYTYYLATALFLIFG 144 (294)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 345566666665544433
No 312
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=60.89 E-value=41 Score=33.68 Aligned_cols=24 Identities=4% Similarity=0.115 Sum_probs=15.6
Q ss_pred Hhhhhhhhhchhhhhhhhhccccc
Q 010692 328 GVTIVCGIVGTISGGFILDQMGAT 351 (503)
Q Consensus 328 ~~~~~~~~~~~~~~g~l~d~~~~~ 351 (503)
.+..+.+.++...++++...++.+
T Consensus 304 ~~y~~~~~iaGy~S~~~yk~~~g~ 327 (521)
T PF02990_consen 304 ILYALTSFIAGYVSARLYKSFGGK 327 (521)
T ss_pred HHHHHHhhHHHHHHHHHHHHcCCC
Confidence 344566666777777777777654
No 313
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=60.13 E-value=1.7e+02 Score=28.45 Aligned_cols=45 Identities=20% Similarity=0.121 Sum_probs=30.1
Q ss_pred CCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHH
Q 010692 156 PVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPF 205 (503)
Q Consensus 156 ~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~ 205 (503)
.+++.+..+++.+++.+.|...-|+..+.. |=++..+..+++.+.
T Consensus 18 ~~~d~~W~l~l~GTAIGAGmLfLPI~~g~~-----Gf~p~lillll~~p~ 62 (443)
T PRK13629 18 RKSDTTWTLGLFGTAIGAGVLFFPIRAGFG-----GLIPILLMLVLAYPI 62 (443)
T ss_pred ccccchHHHHHHHHHHhHHHHHHHHHHhcc-----hHHHHHHHHHHHHHH
Confidence 445678889999999999988888876553 444444444443333
No 314
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=58.20 E-value=27 Score=25.73 Aligned_cols=51 Identities=20% Similarity=0.096 Sum_probs=41.6
Q ss_pred cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh
Q 010692 73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS 123 (503)
Q Consensus 73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 123 (503)
+..|-+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+..+.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 456888999999999999999999999988777777777777776655443
No 315
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=57.39 E-value=84 Score=27.86 Aligned_cols=20 Identities=5% Similarity=-0.217 Sum_probs=8.9
Q ss_pred HHHHhhhhhccccchhhhhc
Q 010692 298 YNFVIGAYSYWGPKAGYNIY 317 (503)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~ 317 (503)
.....++....=..|.++..
T Consensus 190 ~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 190 FAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred HHHHHHhcccchHHHHHhCc
Confidence 33444444443334555543
No 316
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=57.20 E-value=24 Score=28.18 Aligned_cols=32 Identities=6% Similarity=-0.112 Sum_probs=22.9
Q ss_pred hccchhhHHhhcccCCCCchhHHHHHHHHHhh
Q 010692 395 ATQAPVNYVCLHSVKPSLRALSMAISTVSIHI 426 (503)
Q Consensus 395 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 426 (503)
+..+..|.+.+..-.++..|...|+-..-.|.
T Consensus 110 gllGisYGilSaSWD~~r~GSllG~~e~~~N~ 141 (153)
T PF11947_consen 110 GLLGISYGILSASWDPEREGSLLGWEEFKRNW 141 (153)
T ss_pred HHHhhhhhhcccccCCCCCCCcccHHHHHHhH
Confidence 33445566677777888899999988766655
No 317
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=55.17 E-value=68 Score=28.43 Aligned_cols=9 Identities=22% Similarity=0.291 Sum_probs=4.5
Q ss_pred hHHHHHhhh
Q 010692 435 LVGVLQDHV 443 (503)
Q Consensus 435 ~~g~l~~~~ 443 (503)
+.||...++
T Consensus 94 l~Gw~~grf 102 (254)
T PF07857_consen 94 LTGWASGRF 102 (254)
T ss_pred HHHHHHhhc
Confidence 455555443
No 318
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=54.64 E-value=38 Score=27.11 Aligned_cols=51 Identities=8% Similarity=0.033 Sum_probs=35.3
Q ss_pred hHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHH
Q 010692 124 FDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVAL 177 (503)
Q Consensus 124 ~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~ 177 (503)
+++..++..-.+.|+|.- ...+.+++.-.++++.|..+|+-..-.+++-+.
T Consensus 95 P~~~~~~~S~~~Fg~gll---GisYGilSaSWD~~r~GSllG~~e~~~N~~r~~ 145 (153)
T PF11947_consen 95 PPWAVLLVSLVFFGLGLL---GISYGILSASWDPEREGSLLGWEEFKRNWGRMW 145 (153)
T ss_pred CchHHHHHHHHHHHHHHH---hhhhhhcccccCCCCCCCcccHHHHHHhHHHHH
Confidence 455566666666665543 345666777778888999999999888887654
No 319
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=52.49 E-value=79 Score=25.32 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=27.9
Q ss_pred HHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692 79 SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 119 (503)
Q Consensus 79 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 119 (503)
..-|.+++.+.+.+.|++.+|..+++..........++.+.
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~i 99 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLI 99 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHH
Confidence 34788999999999999999998874333333333333333
No 320
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=52.44 E-value=1.8e+02 Score=26.25 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=34.5
Q ss_pred HHHHHHhhhhhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhccccc
Q 010692 277 QDTKVLLQEKVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGAT 351 (503)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~ 351 (503)
+..+++.++|+.+..................|.| +.++.-+.+..+..-+-+.-++|.+ ++-||+.|-
T Consensus 60 ~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAv----n~g~~leaSLGY~InPL~~VllG~l---flkErls~~ 127 (293)
T COG2962 60 RELKQLLKQPKTLLMLALTALLIGLNWWLFIWAV----NNGHVLEASLGYFINPLVNVLLGRL---FLKERLSRL 127 (293)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheec----CCCchhHHHhHHHHHHHHHHHHHHH---HHHhhccHH
Confidence 4456677888777666655555555555555654 2223223333333333333333433 345666554
No 321
>PRK02237 hypothetical protein; Provisional
Probab=52.40 E-value=46 Score=24.64 Aligned_cols=50 Identities=14% Similarity=0.026 Sum_probs=40.4
Q ss_pred cchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh
Q 010692 73 FQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS 122 (503)
Q Consensus 73 ~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~ 122 (503)
+..|-+.++|.-.+.+.++.+++..|+.-+-+.=.+|..+..+|..+.-+
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 34788899999999999999999999997777667777777777655443
No 322
>PF00558 Vpu: Vpu protein; InterPro: IPR008187 The Human immunodeficiency virus 1 (HIV-1) Vpu protein acts in the degradation of CD4 in the endoplasmic reticulum and in the enhancement of virion release from the plasma membrane of infected cells [].; GO: 0019076 release of virus from host; PDB: 2JPX_A 1PI8_A 2GOH_A 2GOF_A 1PI7_A 1PJE_A 1VPU_A 2K7Y_A.
Probab=50.96 E-value=28 Score=24.23 Aligned_cols=9 Identities=22% Similarity=0.711 Sum_probs=3.7
Q ss_pred HHHHHHHHH
Q 010692 457 FFLAAGIWF 465 (503)
Q Consensus 457 ~~~~~~~~~ 465 (503)
++++.+++.
T Consensus 16 ~iiaIvvW~ 24 (81)
T PF00558_consen 16 LIIAIVVWT 24 (81)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 333444443
No 323
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=50.79 E-value=76 Score=26.48 Aligned_cols=24 Identities=17% Similarity=0.487 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHhHHHHhhhhcCC
Q 010692 79 SSAFMVGLLVASPIFASLAKSHNP 102 (503)
Q Consensus 79 ~s~~~~~~~~~~~~~g~l~dr~Gr 102 (503)
..-|.+++.+++.+.|++.||.-+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 357889999999999999999975
No 324
>PRK10263 DNA translocase FtsK; Provisional
Probab=50.52 E-value=3.1e+02 Score=30.91 Aligned_cols=17 Identities=35% Similarity=0.331 Sum_probs=10.3
Q ss_pred ccccchhhHHHHHhhhh
Q 010692 428 GDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 428 g~~~~~~~~g~l~~~~g 444 (503)
|+++|-.+...+...+|
T Consensus 143 GGIIG~lLs~lL~~LfG 159 (1355)
T PRK10263 143 GGVIGSLLSTTLQPLLH 159 (1355)
T ss_pred cchHHHHHHHHHHHHHh
Confidence 55666666666665555
No 325
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=50.37 E-value=1.9e+02 Score=26.36 Aligned_cols=57 Identities=11% Similarity=0.141 Sum_probs=35.1
Q ss_pred HHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc
Q 010692 129 IAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 186 (503)
Q Consensus 129 l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 186 (503)
--..|.+.|+-.- .+..++++++-.||++++--..--.....+++.++-|++|-.+.
T Consensus 22 ~~~lr~~~g~~~v-lf~PGy~l~~~lfp~~~~l~~~er~~ls~glSi~~~~~~g~~l~ 78 (287)
T PF07760_consen 22 IPPLRVILGFPFV-LFLPGYALVAALFPRKHDLDGIERLALSVGLSIAIVPLIGLLLN 78 (287)
T ss_pred hhHHHHHHHHHHH-HHhccHHHHHHHccCcCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567888887764 45668899999999665433333334444444455565554443
No 326
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=48.92 E-value=2.8e+02 Score=27.45 Aligned_cols=73 Identities=8% Similarity=-0.089 Sum_probs=40.3
Q ss_pred HHHHHhhccchhhHHhhcccCC-CCchhHHHHHHHHHhhcccccchhhHHHHHhhhhhHHHHHHHHHHHHHHHHH
Q 010692 389 GELLVFATQAPVNYVCLHSVKP-SLRALSMAISTVSIHIFGDVPSSPLVGVLQDHVNNWRKTTLALTSIFFLAAG 462 (503)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 462 (503)
.+.+....-.+.-.-+.+.+|. +.++.-+|-.+...+++..++.-..++.+....| |.....+.-.+.++..+
T Consensus 294 Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~G-W~~~AlitPiv~litg~ 367 (509)
T COG3202 294 YGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVG-WFTGALITPLVMLITGV 367 (509)
T ss_pred HHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhh-HHHHHHHHHHHHHHHHH
Confidence 3444444444555566666766 4567777766655555334445556677777666 55444444444444433
No 327
>KOG2601 consensus Iron transporter [Inorganic ion transport and metabolism]
Probab=48.71 E-value=1.4e+02 Score=28.31 Aligned_cols=17 Identities=12% Similarity=0.327 Sum_probs=13.0
Q ss_pred ccccchhhHHHHHhhhh
Q 010692 428 GDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 428 g~~~~~~~~g~l~~~~g 444 (503)
...++|.+.|.+....+
T Consensus 187 tn~Lapv~tg~Iitfvs 203 (503)
T KOG2601|consen 187 TNLLAPVITGLIITFVS 203 (503)
T ss_pred hhchhhhhhcccceeec
Confidence 66778999998887654
No 328
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=47.65 E-value=1.4e+02 Score=27.01 Aligned_cols=39 Identities=13% Similarity=0.020 Sum_probs=21.1
Q ss_pred HHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhhhhhh
Q 010692 106 IGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 106 l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~g~~~~~ 144 (503)
++.+++++++++++..+. ++.|.+.+.-++.+++.++..
T Consensus 2 L~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ml~ 41 (284)
T PF12805_consen 2 LIATLLCFALASLLVGLLFPYPWLLILVLALLTFFFGMLG 41 (284)
T ss_pred HHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHH
Confidence 345555565555555544 445555556666666555443
No 329
>COG1230 CzcD Co/Zn/Cd efflux system component [Inorganic ion transport and metabolism]
Probab=46.60 E-value=29 Score=31.36 Aligned_cols=35 Identities=9% Similarity=0.095 Sum_probs=19.0
Q ss_pred chhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHH
Q 010692 160 KTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYA 194 (503)
Q Consensus 160 r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~ 194 (503)
....-+......-.-.-+|.++++.+....||.|.
T Consensus 153 lN~r~a~LHvl~D~Lgsv~vIia~i~i~~~~w~~~ 187 (296)
T COG1230 153 LNMRGAYLHVLGDALGSVGVIIAAIVIRFTGWSWL 187 (296)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 33444445544444444555566666666678773
No 330
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=45.51 E-value=3.1e+02 Score=27.07 Aligned_cols=9 Identities=0% Similarity=0.379 Sum_probs=4.8
Q ss_pred hhhhccccc
Q 010692 343 FILDQMGAT 351 (503)
Q Consensus 343 ~l~d~~~~~ 351 (503)
.+.+|++++
T Consensus 106 ~l~k~l~~~ 114 (465)
T PF03606_consen 106 LLIKPLKGK 114 (465)
T ss_pred HHHHHhcCC
Confidence 344666554
No 331
>TIGR00844 c_cpa1 na(+)/h(+) antiporter. This model is specific for the fungal members of this family.
Probab=44.41 E-value=4.2e+02 Score=28.21 Aligned_cols=39 Identities=10% Similarity=0.094 Sum_probs=23.5
Q ss_pred HHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHH
Q 010692 164 LSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEAILM 202 (503)
Q Consensus 164 ~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~ 202 (503)
.-+...+..++.++..+++.++...++|...+++.++++
T Consensus 103 ~rLl~~~M~lT~livAL~a~~Li~GL~~~~ALLLGAILA 141 (810)
T TIGR00844 103 TMLLVPVMTSGWLVIALFVWILVPGLNFPASLLMGACIT 141 (810)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHhhhc
Confidence 334444555666666666655644567887777776654
No 332
>COG4177 LivM ABC-type branched-chain amino acid transport system, permease component [Amino acid transport and metabolism]
Probab=44.14 E-value=2.6e+02 Score=25.82 Aligned_cols=60 Identities=12% Similarity=0.152 Sum_probs=35.9
Q ss_pred HHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhc
Q 010692 126 FWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVG 186 (503)
Q Consensus 126 ~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~ 186 (503)
...+.++-++.|++.+.........-.|.+.. +.+...-++....+.|...||++|..+.
T Consensus 208 l~aF~isa~~AGiAGaL~a~~~~~v~p~~f~~-~~S~~~l~~vvlGG~Gt~~G~v~Ga~l~ 267 (314)
T COG4177 208 LLAFVISAAIAGIAGALYALYLGFVSPESFSF-TLSIEVLAMVVLGGAGTLFGALLGAVLV 267 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhceeChhhccH-HHHHHHHHHHHHcCccccHHHHHHHHHH
Confidence 45567778888887765544433333444432 2444444455556677888888887765
No 333
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=42.53 E-value=3.2e+02 Score=26.33 Aligned_cols=33 Identities=9% Similarity=0.045 Sum_probs=23.3
Q ss_pred CchhHHHHHHhHHhHHHHHHHHHHHhhcCcchh
Q 010692 159 QKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNW 191 (503)
Q Consensus 159 ~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gw 191 (503)
+|.+...+.....-++..+-|+++.+.-...||
T Consensus 108 eR~~~~~~ii~~~l~~~~vy~~~~~w~w~~~Gw 140 (399)
T PF00909_consen 108 ERIKFSAYIIFGFLWGGLVYPPLAHWVWGENGW 140 (399)
T ss_dssp CCCHHHHHHHHHHHCCCCTHHHHHHHHHCHCHH
T ss_pred ceeeehHHHHHHHHHhhhhccccceEEEecchh
Confidence 477777777777777888888877665543344
No 334
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=41.55 E-value=1.2e+02 Score=24.18 Aligned_cols=52 Identities=13% Similarity=0.146 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHH
Q 010692 79 SSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFDFWSIAICRMLV 136 (503)
Q Consensus 79 ~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 136 (503)
...++++..+.+...-.+..|..||+.=.++.. ++.+.++|..|++++.++.
T Consensus 67 ~f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giS------i~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 67 SFLFSLAGGLLSLLVMALLKKLFKKKFSLIGIS------IAGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 356778888888888888999988776555543 3446678888888777664
No 335
>KOG4112 consensus Signal peptidase subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=40.93 E-value=63 Score=23.07 Aligned_cols=16 Identities=19% Similarity=0.395 Sum_probs=9.6
Q ss_pred ccccchhhHHHHHhhhh
Q 010692 428 GDVPSSPLVGVLQDHVN 444 (503)
Q Consensus 428 g~~~~~~~~g~l~~~~g 444 (503)
++++ ..+.|+..+.++
T Consensus 35 ~aiV-g~i~Gf~~Qqls 50 (101)
T KOG4112|consen 35 GAIV-GFIYGFAQQQLS 50 (101)
T ss_pred HHHH-HHHHHHHHHHHH
Confidence 5554 346777777655
No 336
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=40.41 E-value=1.9e+02 Score=23.77 Aligned_cols=60 Identities=10% Similarity=-0.004 Sum_probs=34.4
Q ss_pred ccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcC-cc-----hhHHHHHHHHHHHHHHHHHHHhc
Q 010692 153 DNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGS-HL-----NWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 153 ~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~-~~-----gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
..++.+++.+..+.+.++.-.+...--.+=+.+.. +. .+...+++.++++.+..+++-..
T Consensus 13 ~~~~~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V 78 (166)
T PF05255_consen 13 PWFDWSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSV 78 (166)
T ss_pred CCCCchHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccc
Confidence 34555556666665555544444333333333332 21 57888899998887777665544
No 337
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=39.92 E-value=36 Score=29.26 Aligned_cols=54 Identities=17% Similarity=0.129 Sum_probs=37.8
Q ss_pred HHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhh
Q 010692 131 ICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVV 185 (503)
Q Consensus 131 ~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l 185 (503)
..-.-.|+|+|..+.++..-+.+.+|+ ......++.....-+....|-.+.-++
T Consensus 176 ALAMasGvGSgSMMaAa~~aL~~~~P~-~a~~i~A~AaaSNllt~~~G~Y~~ifi 229 (241)
T PF11299_consen 176 ALAMASGVGSGSMMAAASGALAAAYPE-MADQILAFAAASNLLTSVTGLYMSIFI 229 (241)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHCcc-hHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344557889998888888889999874 466667776666666666665554443
No 338
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=37.12 E-value=2.3e+02 Score=29.78 Aligned_cols=53 Identities=17% Similarity=0.158 Sum_probs=33.3
Q ss_pred HHHHhhhh---c-CCchhHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHhhhhhhh
Q 010692 92 IFASLAKS---H-NPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVGEASFI 144 (503)
Q Consensus 92 ~~g~l~dr---~-Grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~g~~~~~ 144 (503)
+.+-++|. + ||.+-++++.++++++++...+... .|.+..+-++.+++.++..
T Consensus 42 ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlg 99 (704)
T TIGR01666 42 IAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLG 99 (704)
T ss_pred HhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHH
Confidence 34556663 3 5666777888888888887776544 4555556666666555433
No 339
>PRK10263 DNA translocase FtsK; Provisional
Probab=36.99 E-value=1.6e+02 Score=33.01 Aligned_cols=23 Identities=13% Similarity=0.130 Sum_probs=11.4
Q ss_pred HHHHHHHHHHHhhcCcchhHHHH
Q 010692 173 TGVALGYVYGGVVGSHLNWRYAF 195 (503)
Q Consensus 173 ~G~~~g~~l~~~l~~~~gwr~~f 195 (503)
.|+++|..++.++...+|.-...
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~ 164 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGT 164 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHH
Confidence 35555555555555444443333
No 340
>COG3619 Predicted membrane protein [Function unknown]
Probab=35.47 E-value=3e+02 Score=23.96 Aligned_cols=119 Identities=13% Similarity=0.142 Sum_probs=54.8
Q ss_pred ccchhhHHHHHHHHHHHHHhHHHHhhhhcCC-ch-h-HHHHHHHHHHHHHHhhh----hhHHHHHHHHHHHHHhh-----
Q 010692 72 NFQDGVLSSAFMVGLLVASPIFASLAKSHNP-FR-L-IGVGLSVWTFATAGCGS----SFDFWSIAICRMLVGVG----- 139 (503)
Q Consensus 72 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Gr-r~-~-l~~~~~~~~~~~~~~~~----~~~~~~l~~~r~l~G~g----- 139 (503)
+...........+...++......+..|..| .. . ...+.++........++ +++....+..-+.+|+=
T Consensus 54 ~~~~a~~~~~pii~Fv~Gv~~~~~~~r~~~~~~~~~l~~~~~ll~~~v~~~~~~~p~~~~~~~~~il~~f~mg~Qnasf~ 133 (226)
T COG3619 54 DAALAVLLLLPILAFVLGVAAAELISRRATRSFIPVLLLVSLLLALIALLALGFIPESSPDFVAVILVAFAMGIQNASFR 133 (226)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHH
Confidence 3344555667777777775555555555554 12 1 22222222222222333 24555555555555522
Q ss_pred ------hhhhhh-----chhhhhhccCCCCC-chhHHHHHHhHHhHHHHHHHHHHHhhcCcch
Q 010692 140 ------EASFIS-----LAAPFIDDNAPVPQ-KTAWLSMFYMCIPTGVALGYVYGGVVGSHLN 190 (503)
Q Consensus 140 ------~~~~~~-----~~~~~i~~~~~~~~-r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~g 190 (503)
.+..+. ....-+.+++..|+ ....-...+...-++.++|...++++...+|
T Consensus 134 k~~g~~~~~t~~TGnl~~~~~~l~~~l~~k~~~~~~~~~~~~~~il~f~~GAi~g~ll~~~~g 196 (226)
T COG3619 134 KVGGAPYGTTYVTGNLKSAGRGLGRYLSGKDKEKLRDWLIYLSLILSFIVGAICGALLTLFFG 196 (226)
T ss_pred HhcCccccchhhhhhHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 111111 11122344544332 2233344455555666666666666665444
No 341
>KOG1277 consensus Endosomal membrane proteins, EMP70 [Intracellular trafficking, secretion, and vesicular transport]
Probab=35.10 E-value=4.3e+02 Score=25.70 Aligned_cols=38 Identities=11% Similarity=0.109 Sum_probs=15.6
Q ss_pred hhhhhchhhhhhhhhcccccchhhHHHHHHHHHHHHHHH
Q 010692 332 VCGIVGTISGGFILDQMGATISNAFKLLSAATFLGAISC 370 (503)
Q Consensus 332 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~ 370 (503)
+..-+....+|-+-.|.|.|+-. +.+++.+.++....+
T Consensus 338 lTs~i~GY~~gs~Y~r~gG~~Wi-k~m~lta~Lfp~~~~ 375 (593)
T KOG1277|consen 338 LTSPINGYVSGSFYARLGGRRWI-KNMLLTASLFPVPVF 375 (593)
T ss_pred hcccccccccceeeehhccHHHH-HHHHHHhhhhhHHHH
Confidence 33334444444444555443211 134444444444333
No 342
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=35.05 E-value=1.2e+02 Score=19.20 Aligned_cols=36 Identities=3% Similarity=-0.116 Sum_probs=21.4
Q ss_pred HHHHHHHHHHHhHHHHhhhhc-CCchhHHHHHHHHHH
Q 010692 80 SAFMVGLLVASPIFASLAKSH-NPFRLIGVGLSVWTF 115 (503)
Q Consensus 80 s~~~~~~~~~~~~~g~l~dr~-Grr~~l~~~~~~~~~ 115 (503)
........+.....|+..|+. |.++...+..++.++
T Consensus 7 g~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 7 GFTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 344555666667778887754 775655544444443
No 343
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=34.75 E-value=56 Score=24.34 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=23.1
Q ss_pred CcchhHHHHHHHHHHHHHHHHHHHhccccc
Q 010692 187 SHLNWRYAFWGEAILMLPFAVLAFVIKPLQ 216 (503)
Q Consensus 187 ~~~gwr~~f~~~~~~~~~~~~~~~~~~p~~ 216 (503)
+..+|+.+|++...++++.+.+.+.+.|++
T Consensus 55 d~e~we~~~f~~~~~~~v~~~~~~~y~PD~ 84 (105)
T PF10183_consen 55 DWEGWELPFFFGFSGSLVFGGVFLAYKPDT 84 (105)
T ss_pred hHhhhHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 456899999998888777777777776753
No 344
>PF13268 DUF4059: Protein of unknown function (DUF4059)
Probab=34.53 E-value=1.2e+02 Score=20.48 Aligned_cols=30 Identities=27% Similarity=0.469 Sum_probs=15.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccccccccc
Q 010692 450 TLALTSIFFLAAGIWFVGIFLKSIDKFNED 479 (503)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 479 (503)
.............++..++..++++|..+|
T Consensus 13 L~ls~i~V~~~~~~wi~~Ra~~~~DKT~~e 42 (72)
T PF13268_consen 13 LLLSSILVLLVSGIWILWRALRKKDKTAKE 42 (72)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCcHHH
Confidence 333444444445566666655555555443
No 345
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=32.32 E-value=1.9e+02 Score=20.64 Aligned_cols=44 Identities=14% Similarity=0.021 Sum_probs=31.1
Q ss_pred HHHHHHHHhHHHHhhhhcCC-------chhHHHHHHHHHHHHHHhhhhhHH
Q 010692 83 MVGLLVASPIFASLAKSHNP-------FRLIGVGLSVWTFATAGCGSSFDF 126 (503)
Q Consensus 83 ~~~~~~~~~~~g~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 126 (503)
..+.....+.++++.+|.-+ ++.+.++.++...+..+++..+|.
T Consensus 28 ~a~~ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 28 WAGATAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 34455566777777777655 678888888888888887776553
No 346
>PF13386 DsbD_2: Cytochrome C biogenesis protein transmembrane region
Probab=31.48 E-value=3.2e+02 Score=23.09 Aligned_cols=30 Identities=3% Similarity=0.078 Sum_probs=20.6
Q ss_pred hHHHHHhhhhhhhhchhhhhhhhhcccccc
Q 010692 323 DMMFGGVTIVCGIVGTISGGFILDQMGATI 352 (503)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~ 352 (503)
.......++++.++.-+..+....+.+++.
T Consensus 152 G~l~m~~FgLGT~p~ll~~~~~~~~l~~~~ 181 (199)
T PF13386_consen 152 GALLMLAFGLGTLPALLLAGLLAGKLSRRL 181 (199)
T ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 345556777777777777777777776553
No 347
>PF11151 DUF2929: Protein of unknown function (DUF2929); InterPro: IPR021324 This family of proteins with unknown function appears to be restricted to Firmicutes.
Probab=30.70 E-value=1.5e+02 Score=19.11 Aligned_cols=43 Identities=23% Similarity=0.269 Sum_probs=28.3
Q ss_pred HHhHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHHhc
Q 010692 170 CIPTGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAFVI 212 (503)
Q Consensus 170 ~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~ 212 (503)
+.-+|.++|.+.+......++++....+..+.+++..++....
T Consensus 10 s~il~~vvgyI~ssL~~~~~n~~~~~Ii~vi~~i~~~~~~~~i 52 (57)
T PF11151_consen 10 SFILGEVVGYIGSSLTGVTYNFTTAAIIAVIFGIIVANIIAVI 52 (57)
T ss_pred HHHHHHHHHHHHHHHhCCCCChHHHHHHHHHHHHHHHHHHHHc
Confidence 3456777777777766667777777777766666666555433
No 348
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=30.43 E-value=4.9e+02 Score=27.45 Aligned_cols=54 Identities=19% Similarity=0.159 Sum_probs=34.3
Q ss_pred hHHHHhhhhc----CCchhHHHHHHHHHHHHHHhhhhhHH-HHHHHHHHHHHhhhhhhh
Q 010692 91 PIFASLAKSH----NPFRLIGVGLSVWTFATAGCGSSFDF-WSIAICRMLVGVGEASFI 144 (503)
Q Consensus 91 ~~~g~l~dr~----Grr~~l~~~~~~~~~~~~~~~~~~~~-~~l~~~r~l~G~g~~~~~ 144 (503)
.+++-+.|.= ||.+-++++.++++++++...+...+ |.+..+-++.+++.++..
T Consensus 41 ~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlg 99 (701)
T TIGR01667 41 IIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLG 99 (701)
T ss_pred hHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 3445555533 55777888888888888887766544 455555566666555443
No 349
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=28.67 E-value=5.9e+02 Score=25.22 Aligned_cols=31 Identities=10% Similarity=-0.164 Sum_probs=22.4
Q ss_pred CCchhHHHHHHHHHHHHHHhhhhhHHHHHHH
Q 010692 101 NPFRLIGVGLSVWTFATAGCGSSFDFWSIAI 131 (503)
Q Consensus 101 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 131 (503)
|.|+...-.++.+.++.++-++.+++....+
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl 369 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFV 369 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHH
Confidence 3445556666778888899999888876653
No 350
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=28.64 E-value=2.5e+02 Score=23.78 Aligned_cols=31 Identities=10% Similarity=-0.007 Sum_probs=24.6
Q ss_pred CCCchhHHHHHHhHHhHHHHHHHHHHHhhcC
Q 010692 157 VPQKTAWLSMFYMCIPTGVALGYVYGGVVGS 187 (503)
Q Consensus 157 ~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~ 187 (503)
.++.+++.++--.+..+|.++|..+..++..
T Consensus 136 ~~~~~rA~~~~~~~L~~G~~lGs~l~~~l~~ 166 (194)
T PF11833_consen 136 ERKLGRAFLWTLGGLVVGLILGSLLASWLPV 166 (194)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 4556888888888888899999888877753
No 351
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=28.56 E-value=1.5e+02 Score=18.30 Aligned_cols=38 Identities=13% Similarity=0.145 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHH
Q 010692 173 TGVALGYVYGGVVGSHLNWRYAFWGEAILMLPFAVLAF 210 (503)
Q Consensus 173 ~G~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~ 210 (503)
+|..+|..+.+.+....++.+.-++.+++..+..+..+
T Consensus 6 iGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 6 IGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred HHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 34444444444433323345555566666555555444
No 352
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=27.51 E-value=1.3e+02 Score=23.02 Aligned_cols=11 Identities=36% Similarity=0.773 Sum_probs=4.9
Q ss_pred HHHHHHHHHHH
Q 010692 446 WRKTTLALTSI 456 (503)
Q Consensus 446 ~~~~~~~~~~~ 456 (503)
|.+..+.++++
T Consensus 35 WNysiL~Ls~v 45 (125)
T PF15048_consen 35 WNYSILALSFV 45 (125)
T ss_pred cchHHHHHHHH
Confidence 44444444443
No 353
>PF01864 DUF46: Putative integral membrane protein DUF46; InterPro: IPR002726 This archaebacterial protein has no known function. It contains several predicted transmembrane regions, suggesting it is an integral membrane protein.
Probab=27.19 E-value=1.8e+02 Score=24.15 Aligned_cols=30 Identities=20% Similarity=0.447 Sum_probs=22.8
Q ss_pred HHHHhhhhhhhhchhhhhhhhhcccccchh
Q 010692 325 MFGGVTIVCGIVGTISGGFILDQMGATISN 354 (503)
Q Consensus 325 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 354 (503)
......+.++++|=+.+.++=+|++.++..
T Consensus 89 ~~g~ll~~gamlGDl~~SFIKRRlgi~~G~ 118 (175)
T PF01864_consen 89 LLGFLLGLGAMLGDLPGSFIKRRLGIPRGA 118 (175)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHhcCCCCCC
Confidence 344566778888889999998999877554
No 354
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=26.80 E-value=4.2e+02 Score=22.98 Aligned_cols=28 Identities=4% Similarity=-0.018 Sum_probs=19.9
Q ss_pred hHHHHHhhhhhhhhchhhhhhhhhcccc
Q 010692 323 DMMFGGVTIVCGIVGTISGGFILDQMGA 350 (503)
Q Consensus 323 ~~~~~~~~~~~~~~~~~~~g~l~d~~~~ 350 (503)
.+.....++++..+.-+..|..++++..
T Consensus 166 Gal~mlaFGlGTlP~ll~~G~~s~~~s~ 193 (232)
T COG2836 166 GALVMLAFGLGTLPNLLAMGIFSSKLSK 193 (232)
T ss_pred HHHHHHHHhhcccHHHHHHHHHHHHHHH
Confidence 3445566777888888888888887754
No 355
>PF11511 RhodobacterPufX: Intrinsic membrane protein PufX; InterPro: IPR020169 PufX organises RC-LH1, the photosynthesis reaction centre-light harvesting complex 1 core complex of Rhodobacter sphaeroides []. It also facilitates the exchange of quinol for quinone between the reaction centre and cytochrome bc(1) complexes. In organic solvent, PufX contains two hydrophobic helices which are flanked by unstructured regions and connected by a helical bend [].; PDB: 2DW3_A 2ITA_A 2NRG_A.
Probab=26.55 E-value=2e+02 Score=19.20 Aligned_cols=30 Identities=10% Similarity=0.124 Sum_probs=15.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHhccccccCC
Q 010692 190 NWRYAFWGEAILMLPFAVLAFVIKPLQLKG 219 (503)
Q Consensus 190 gwr~~f~~~~~~~~~~~~~~~~~~p~~~~~ 219 (503)
||-.++.+...+.++..-.+=.++||..+.
T Consensus 29 g~Aav~~~~~~~~l~~~~~iG~~LPe~s~~ 58 (67)
T PF11511_consen 29 GYAAVFFLGLWFLLVALYFIGLLLPERSRQ 58 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSTTTCSS
T ss_pred cHHHHHHHHHHHHHHHHHHHHHhCchhccc
Confidence 455555555544444444444556775443
No 356
>PRK03818 putative transporter; Validated
Probab=26.28 E-value=4.9e+02 Score=26.47 Aligned_cols=83 Identities=12% Similarity=0.061 Sum_probs=46.4
Q ss_pred chhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhh-hHHHHHHHHHHHHHhhhhhhhhchhhhhh
Q 010692 74 QDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSS-FDFWSIAICRMLVGVGEASFISLAAPFID 152 (503)
Q Consensus 74 ~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~g~~~~~~~~~~~i~ 152 (503)
+.|+...++.+|...+.-+..-+.+..|.+.. +.+.++..+..++..+. .-..-+=..+.+-.++.+...++..+++.
T Consensus 436 ~~GL~lFla~vGl~aG~~f~~~~~~~~G~~~~-~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~G~~aG~~t~tp~l~~a~ 514 (552)
T PRK03818 436 ELGIVLFLAVVGLKSGGDFVDTLVNGEGLSWI-GYGFLITAVPLLIVGILARMLAKMNYLTLCGMLAGSMTDPPALAFAN 514 (552)
T ss_pred HHhHHHHHHHHHhhhhHHHHHHHhccchHHHH-HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHhccCCCcHHHHHHh
Confidence 46777777777777777666666555565554 34555554444443333 22222223344444555666677778888
Q ss_pred cc-CCC
Q 010692 153 DN-APV 157 (503)
Q Consensus 153 ~~-~~~ 157 (503)
|. ...
T Consensus 515 ~~~~~~ 520 (552)
T PRK03818 515 NLHPTS 520 (552)
T ss_pred cccCCC
Confidence 75 443
No 357
>KOG3097 consensus Predicted membrane protein [Function unknown]
Probab=25.85 E-value=1.4e+02 Score=27.81 Aligned_cols=103 Identities=11% Similarity=0.016 Sum_probs=48.0
Q ss_pred hhHHHHHHHHHHHHHHhhhhhccccchhhhhcccchhhHHHHHhhhhhhhhchhhhhhhhhcccccchhhHHHHHHHHHH
Q 010692 286 KVYVVNVLGYIAYNFVIGAYSYWGPKAGYNIYHMSNADMMFGGVTIVCGIVGTISGGFILDQMGATISNAFKLLSAATFL 365 (503)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~ 365 (503)
|+++...+..+..+.++.+........-.+ ++.. +. ......-+...++.+.+.+++|-| ..+......
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~vn~~-lg~~--sl---~~~y~~l~~s~m~~~~~Ir~~g~K-----~tm~lav~~ 97 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTSVNYD-LGTV--SL---GALYLSLIDSSMFMPLLIRFLGTK-----WTMVLAVFP 97 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHhcC-cccc--hh---hhhhHHHHHHHHHHHHHHHHHhhH-----HHHHHHHHH
Confidence 345555555555555555544432222212 2211 11 112233344556666888999987 554443333
Q ss_pred HHHHHHHHHHhhhHHHHHHHHHHHHHHHhhccchh
Q 010692 366 GAISCLTAFCLSSLYGFLALFTVGELLVFATQAPV 400 (503)
Q Consensus 366 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 400 (503)
..... ..-..+.....+......|++.+..+..-
T Consensus 98 Y~lyi-A~Nl~pr~~tlVPa~~~~G~aa~p~W~Sk 131 (390)
T KOG3097|consen 98 YALYI-AANLEPRYETLVPAGLVLGMAAGPIWASK 131 (390)
T ss_pred HHHHH-HhhcchhHHhhccHHHhhccccccccccC
Confidence 22222 12222344455555556666665555443
No 358
>PRK10720 uracil transporter; Provisional
Probab=25.38 E-value=6.4e+02 Score=24.60 Aligned_cols=26 Identities=15% Similarity=-0.153 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhcccccc
Q 010692 192 RYAFWGEAILMLPFAVLAFVIKPLQL 217 (503)
Q Consensus 192 r~~f~~~~~~~~~~~~~~~~~~p~~~ 217 (503)
+..+......+.+.+++.-.+.|.+.
T Consensus 384 ~~~~~~gi~~g~~~ai~Lnlll~~~~ 409 (428)
T PRK10720 384 GAAELKGMALATIVGIGLSLIFKLIS 409 (428)
T ss_pred HHHhcCcHHHHHHHHHHHHHHhcccc
Confidence 33443333444455555555555533
No 359
>PF06826 Asp-Al_Ex: Predicted Permease Membrane Region; InterPro: IPR006512 These sequences contain a domain that is duplicated in HI0035 of Haemophilus influenzae, in YidE and YbjL of Escherichia coli, and in a number of other putative transporters. Member proteins may have 0, 1, or 2 copies of the TrkA-C potassium uptake domain (IPR006037 from INTERPRO) between the duplications. The duplication appears distantly related to both the N- and the C-terminal domains the sodium/hydrogen exchanger family domain (IPR006153 from INTERPRO). The domain contains several apparent transmembrane regions and is proposed here to act in transport.
Probab=24.69 E-value=4e+02 Score=21.96 Aligned_cols=85 Identities=13% Similarity=-0.052 Sum_probs=50.6
Q ss_pred ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhhhhH-HHHHHHHHHHHHhhhhhhhhchhhh
Q 010692 72 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGSSFD-FWSIAICRMLVGVGEASFISLAAPF 150 (503)
Q Consensus 72 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~-~~~l~~~r~l~G~g~~~~~~~~~~~ 150 (503)
-.+.|+...++.+|...+.-+..-+.+. |-|. +..+.++..++.+....... +--+=.....-.++.+...++....
T Consensus 55 l~~~GL~lFl~~VGl~aG~~F~~~l~~~-G~~~-~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~G~~aGa~T~tp~L~~ 132 (169)
T PF06826_consen 55 LRQLGLALFLAAVGLSAGPGFFSSLKRG-GLKL-LLLGVIITLVPLLIALVIGRYLFKLNPGIAAGILAGALTSTPALAA 132 (169)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHH-HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHccccCcHHHHH
Confidence 3467888889999999998888887766 5544 45566666555555443332 1111112222233445566677777
Q ss_pred hhccCCCC
Q 010692 151 IDDNAPVP 158 (503)
Q Consensus 151 i~~~~~~~ 158 (503)
..|...+.
T Consensus 133 A~~~~~~~ 140 (169)
T PF06826_consen 133 AQEAISDS 140 (169)
T ss_pred HHHhhhcC
Confidence 88874333
No 360
>PF10225 DUF2215: Uncharacterized conserved protein (DUF2215); InterPro: IPR024233 This entry represents a domain that is found in a number of different proteins, including a family of transmembrane proteins.
Probab=24.11 E-value=5.1e+02 Score=23.00 Aligned_cols=57 Identities=12% Similarity=0.072 Sum_probs=32.5
Q ss_pred hhhhHHHHHHHHHHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHH
Q 010692 121 GSSFDFWSIAICRMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVY 181 (503)
Q Consensus 121 ~~~~~~~~l~~~r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l 181 (503)
.++.|..-++.+-...|+-.... ...-......| +|.....+...++++|..+-..+
T Consensus 29 ~LS~s~~FyY~sg~~lGv~~s~l--i~~~~~~k~lP--rk~~~~~~l~gg~~~~~y~l~~~ 85 (249)
T PF10225_consen 29 SLSRSVLFYYSSGISLGVLASLL--ILLFQLSKLLP--RKSMFYAVLYGGWSFGLYFLQQL 85 (249)
T ss_pred HhccChhHHHhhhHHHHHHHHHH--HHHHHHHHHcc--CcchhHHHHhhhhHHHHHHHHHH
Confidence 45667777777777777654432 23445677788 34444455555556655444433
No 361
>COG0861 TerC Membrane protein TerC, possibly involved in tellurium resistance [Inorganic ion transport and metabolism]
Probab=24.08 E-value=5.2e+02 Score=23.05 Aligned_cols=58 Identities=5% Similarity=-0.188 Sum_probs=32.7
Q ss_pred hhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHHHhhcCcchhHHHHHHHH
Q 010692 140 EASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYGGVVGSHLNWRYAFWGEA 199 (503)
Q Consensus 140 ~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~~~l~~~~gwr~~f~~~~ 199 (503)
.|.-.....+++.+.+|+++|.|+.-+--.+.-+=-++.-..+.++.+. |.+.+.+.+
T Consensus 30 L~iDN~iviai~~~~Lp~~qr~ral~~Gl~~A~v~R~~ll~~~s~Ll~l--~~~l~~~fg 87 (254)
T COG0861 30 LGIDNAIVIAILASKLPPKQRKKALFIGLAGALVLRIILLASISWLLTL--TQPLLYIFG 87 (254)
T ss_pred HHhhHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--hHHHHHHHH
Confidence 3445666778899999998887764332222222222333344555554 566666644
No 362
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=23.92 E-value=4.3e+02 Score=25.54 Aligned_cols=50 Identities=8% Similarity=0.093 Sum_probs=30.7
Q ss_pred HHHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH
Q 010692 133 RMLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 182 (503)
Q Consensus 133 r~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 182 (503)
-++.|+..|........++.+..+-++---+.++......+|.++.++++
T Consensus 282 A~viG~iag~~~~~~~~~l~~~~~iDD~~~~~~vHg~~Gi~G~i~~glfa 331 (403)
T TIGR00836 282 AIIIGLVAGVLCYLAVSKLKKKLKIDDPLDAFAVHGVGGIWGLIATGLFA 331 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCcccchhhhhhHHHHHHHHHHhc
Confidence 34455555555545555566666555555577777777777777766654
No 363
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=23.45 E-value=8.9e+02 Score=25.57 Aligned_cols=54 Identities=13% Similarity=0.033 Sum_probs=29.1
Q ss_pred hhhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 010692 340 SGGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 393 (503)
Q Consensus 340 ~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (503)
+++-+.|.=++.+.+.+.+++...+..+..+..-...+.++.+...+++..+++
T Consensus 42 ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~ 95 (701)
T TIGR01667 42 IAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGF 95 (701)
T ss_pred HhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 344556766665444445555555555555555555555665555555544443
No 364
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=23.45 E-value=4.7e+02 Score=22.32 Aligned_cols=153 Identities=11% Similarity=-0.040 Sum_probs=0.0
Q ss_pred cCCCCCccccccchhhhhhhhcccchhhhhhhhhchHHHHHHHhhhhh-------HHHHHHHHHHHHHHhhhhhccccch
Q 010692 240 ASNLNDHVSEDISDQASERSIKSIGESRFLNQLSQFSQDTKVLLQEKV-------YVVNVLGYIAYNFVIGAYSYWGPKA 312 (503)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~ 312 (503)
.+++.++...++.++.-+.+++.++.++.....+.....+.+-...+. .|...+-..+..++...+..-+..+
T Consensus 23 ~e~~~e~~L~eil~~LleaQk~G~tA~~lfG~P~~~a~eli~~~~k~~~~~~~~~~~~~~ld~~L~~~~if~~~~gi~~~ 102 (206)
T PF06570_consen 23 SEEEIEELLEEILPHLLEAQKKGKTARQLFGDPKEYADELIKPLPKPKKKNKNSNPWLMALDNSLLFFGIFSLLFGIMGF 102 (206)
T ss_pred CHHHHHHHHHHHHHHHHHHHhCCCcHHHHcCCHHHHHHHHhccccCCcccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_pred hhhhcccchhhHHHHHhhhhhhhhchhhhhhhhh--cccccchhhHHHHHHHHHHHHHHHHHHHHhh---------hHHH
Q 010692 313 GYNIYHMSNADMMFGGVTIVCGIVGTISGGFILD--QMGATISNAFKLLSAATFLGAISCLTAFCLS---------SLYG 381 (503)
Q Consensus 313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~ 381 (503)
+.........-..+.....+++++...+.-++.+ ..+.|....+.+++....+.....+.....- +.+.
T Consensus 103 f~~~~~~~~gi~tli~~~i~~G~~~~~~~~~i~~~~~~~~r~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~ 182 (206)
T PF06570_consen 103 FSPKNSNQYGIITLILVSIVGGLVFYFIFKYIYPYKKKKKRPSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWV 182 (206)
T ss_pred HhhcccccccHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHH
Q ss_pred HHHHHHHHHHH
Q 010692 382 FLALFTVGELL 392 (503)
Q Consensus 382 ~~~~~~~~~~~ 392 (503)
.++..++....
T Consensus 183 ~iiig~i~~~~ 193 (206)
T PF06570_consen 183 YIIIGVIAFAL 193 (206)
T ss_pred HHHHHHHHHHH
No 365
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=23.11 E-value=6.9e+02 Score=24.16 Aligned_cols=48 Identities=10% Similarity=0.118 Sum_probs=26.5
Q ss_pred HHHHhhhhhhhhchhhhhhccCCCCCchhHHHHHHhHHhHHHHHHHHHH
Q 010692 134 MLVGVGEASFISLAAPFIDDNAPVPQKTAWLSMFYMCIPTGVALGYVYG 182 (503)
Q Consensus 134 ~l~G~g~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~g~~l~ 182 (503)
++.|+-.|........++ +..+-++---+..+......+|.++.++..
T Consensus 297 ~iiG~iag~v~~~~~~~~-~~~~iDD~~~~~~vHg~~Gi~G~i~~glf~ 344 (404)
T TIGR03644 297 TLIGAVGGVIVVFSIVLL-DKLKIDDPVGAISVHGVAGIWGTLVVPITN 344 (404)
T ss_pred HHHHHHHHHHHHHHHHHH-HhCCCCCCcCchHhhhHHHHHHHHHHHHhc
Confidence 344444444444444444 445555555667777777666666665554
No 366
>PLN02776 prenyltransferase
Probab=22.33 E-value=5.9e+02 Score=23.90 Aligned_cols=21 Identities=10% Similarity=-0.085 Sum_probs=9.9
Q ss_pred hHHHHHHHHHHHHHHhhhhhH
Q 010692 105 LIGVGLSVWTFATAGCGSSFD 125 (503)
Q Consensus 105 ~l~~~~~~~~~~~~~~~~~~~ 125 (503)
.+.++.++..++..+..+..|
T Consensus 78 A~~~~~~l~~~g~~~l~~~~n 98 (341)
T PLN02776 78 AVAWAVVVGAAGVALLAYKTN 98 (341)
T ss_pred HHHHHHHHHHHHHHHHHHHHh
Confidence 445555555555544333333
No 367
>TIGR03173 pbuX xanthine permease. All the seed members of this model are observed adjacent to genes for either xanthine phosphoribosyltransferase (for the conversion of xanthine to guanine, GenProp0696, ) or genes for the conversion of xanthine to urate and its concomitant catabolism (GenProp0640, GenProp0688, GenProp0686 and GenProp0687). A number of sequences scoring higher than trusted to this model are found in different genomic contexts, and the possibility exist that these transport related compounds in addition to or instead of xanthine itself. The outgroup to this family are sequences which are characterized as uracil permeases or are adjacent to established uracil phosphoribosyltransferases.
Probab=21.73 E-value=7.3e+02 Score=23.93 Aligned_cols=94 Identities=14% Similarity=-0.081 Sum_probs=57.1
Q ss_pred ccccCCCccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHHhhh-hhHHHHHHHHHHHHHhhhhhh
Q 010692 65 RGDFKLNNFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAGCGS-SFDFWSIAICRMLVGVGEASF 143 (503)
Q Consensus 65 ~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~~~~-~~~~~~l~~~r~l~G~g~~~~ 143 (503)
.+..|++.++...+.+...+...++.++-.+-.-++|.|..+..+.....++...... ..++...+.+-++.|+-.-..
T Consensus 20 ~~a~gl~~~~~~~~i~at~l~sgi~tllq~~~~~~~G~~~P~~~g~s~a~~~~~~~~~~~~~~~~~~ga~~v~Gii~ill 99 (406)
T TIGR03173 20 GGALGLSAEQTAYLISADLFACGIATLIQTLGIGPFGIRLPVVQGVSFAAVGPMIAIGAGGGLGAIFGAVIVAGLFVILL 99 (406)
T ss_pred HhhcCCCHHHHHHHHHHHHHHHHHHHHHHhccccccCCccceeecCcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4556888888888888888888888888753333677777666555443333332221 234445555556666544332
Q ss_pred hhchhhhhhccCCCCC
Q 010692 144 ISLAAPFIDDNAPVPQ 159 (503)
Q Consensus 144 ~~~~~~~i~~~~~~~~ 159 (503)
. .....+.+.+|+.-
T Consensus 100 g-~~~~~l~~~iPp~v 114 (406)
T TIGR03173 100 A-PFFSKLVRFFPPVV 114 (406)
T ss_pred H-HHHHHHHHHCCcHH
Confidence 2 24456777787653
No 368
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=21.60 E-value=9.7e+02 Score=25.32 Aligned_cols=53 Identities=9% Similarity=0.038 Sum_probs=28.4
Q ss_pred hhhhhhcccccchhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH
Q 010692 341 GGFILDQMGATISNAFKLLSAATFLGAISCLTAFCLSSLYGFLALFTVGELLV 393 (503)
Q Consensus 341 ~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 393 (503)
.+-++|.=++.+.+.+.+++...+..+..+......+.++.+...+++..+++
T Consensus 43 a~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~ 95 (704)
T TIGR01666 43 AAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGF 95 (704)
T ss_pred hhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHH
Confidence 35566766665554445555444444455555555556666555555544443
No 369
>PTZ00370 STEVOR; Provisional
Probab=21.03 E-value=4.6e+02 Score=23.71 Aligned_cols=24 Identities=8% Similarity=0.095 Sum_probs=9.6
Q ss_pred HHHHHhhhhhHHHHHHHHHHHHHH
Q 010692 436 VGVLQDHVNNWRKTTLALTSIFFL 459 (503)
Q Consensus 436 ~g~l~~~~g~~~~~~~~~~~~~~~ 459 (503)
.+.....+..|..+.+++.++.++
T Consensus 247 AtaAsaaF~Pygiaalvllil~vv 270 (296)
T PTZ00370 247 ASAASSAFYPYGIAALVLLILAVV 270 (296)
T ss_pred HHHHHHhhcccHHHHHHHHHHHHH
Confidence 333333444344444444333333
No 370
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=20.39 E-value=1e+02 Score=22.69 Aligned_cols=48 Identities=17% Similarity=0.058 Sum_probs=36.5
Q ss_pred ccchhhHHHHHHHHHHHHHhHHHHhhhhcCCchhHHHHHHHHHHHHHH
Q 010692 72 NFQDGVLSSAFMVGLLVASPIFASLAKSHNPFRLIGVGLSVWTFATAG 119 (503)
Q Consensus 72 ~~~~g~~~s~~~~~~~~~~~~~g~l~dr~Grr~~l~~~~~~~~~~~~~ 119 (503)
....|-..++|.-.+.+.++.+++..|+.-+-+-=.+|..+..+|..+
T Consensus 54 ~~a~GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~v 101 (109)
T COG1742 54 AAAFGRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAV 101 (109)
T ss_pred chhhhhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceee
Confidence 345677888999999999999999999887766666666666555443
Done!