Query 010693
Match_columns 503
No_of_seqs 352 out of 3515
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 12:16:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010693.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010693hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oz2_A Digeranylgeranylglycero 100.0 2.9E-35 9.9E-40 300.2 32.3 343 83-445 2-367 (397)
2 3cgv_A Geranylgeranyl reductas 100.0 2.7E-34 9.2E-39 293.8 32.1 345 83-447 2-369 (397)
3 3atr_A Conserved archaeal prot 100.0 1.1E-31 3.7E-36 279.7 35.1 353 85-461 6-388 (453)
4 3rp8_A Flavoprotein monooxygen 100.0 8.1E-31 2.8E-35 269.3 26.8 307 79-408 17-354 (407)
5 2qa2_A CABE, polyketide oxygen 100.0 3.4E-29 1.2E-33 263.4 32.3 303 82-408 9-334 (499)
6 2qa1_A PGAE, polyketide oxygen 100.0 2.3E-29 8E-34 264.7 30.7 306 81-408 7-333 (500)
7 3nix_A Flavoprotein/dehydrogen 100.0 6.9E-28 2.4E-32 248.4 30.3 295 84-393 4-329 (421)
8 3ihg_A RDME; flavoenzyme, anth 100.0 3.8E-28 1.3E-32 258.2 27.9 306 84-408 4-357 (535)
9 3fmw_A Oxygenase; mithramycin, 100.0 1.6E-28 5.6E-33 261.7 24.1 303 84-408 48-378 (570)
10 3e1t_A Halogenase; flavoprotei 100.0 3.7E-28 1.3E-32 256.8 26.4 323 83-422 5-367 (512)
11 3i3l_A Alkylhalidase CMLS; fla 100.0 4.4E-28 1.5E-32 258.9 22.0 323 81-421 19-378 (591)
12 1pn0_A Phenol 2-monooxygenase; 100.0 6.7E-27 2.3E-31 253.7 30.4 307 85-408 8-407 (665)
13 2r0c_A REBC; flavin adenine di 100.0 7.2E-27 2.5E-31 248.8 28.7 298 83-408 24-365 (549)
14 2x3n_A Probable FAD-dependent 100.0 3.8E-28 1.3E-32 248.7 18.0 300 85-408 6-343 (399)
15 1k0i_A P-hydroxybenzoate hydro 100.0 4.1E-27 1.4E-31 240.6 22.8 303 85-408 2-334 (394)
16 2dkh_A 3-hydroxybenzoate hydro 100.0 5.5E-26 1.9E-30 246.0 31.5 306 84-408 31-398 (639)
17 4hb9_A Similarities with proba 99.9 4.7E-27 1.6E-31 240.8 21.3 311 86-407 2-367 (412)
18 2xdo_A TETX2 protein; tetracyc 99.9 2.2E-26 7.5E-31 235.6 25.7 310 83-407 24-368 (398)
19 3c96_A Flavin-containing monoo 99.9 1.8E-26 6E-31 237.2 22.9 301 84-408 3-356 (410)
20 3alj_A 2-methyl-3-hydroxypyrid 99.9 1.8E-27 6.2E-32 242.0 14.7 300 83-408 9-334 (379)
21 2vou_A 2,6-dihydroxypyridine h 99.9 3.5E-26 1.2E-30 234.0 22.2 309 84-407 4-351 (397)
22 2gmh_A Electron transfer flavo 99.9 1E-24 3.6E-29 233.3 28.0 318 84-418 34-419 (584)
23 2pyx_A Tryptophan halogenase; 99.9 2.8E-24 9.5E-29 227.8 23.0 304 84-412 6-403 (526)
24 2aqj_A Tryptophan halogenase, 99.9 4.5E-23 1.5E-27 219.2 27.1 297 84-412 4-387 (538)
25 2weu_A Tryptophan 5-halogenase 99.9 3.5E-23 1.2E-27 218.7 24.8 212 169-411 170-394 (511)
26 3c4a_A Probable tryptophan hyd 99.9 4.1E-24 1.4E-28 217.5 16.5 288 86-408 1-315 (381)
27 2e4g_A Tryptophan halogenase; 99.9 6.7E-23 2.3E-27 218.2 26.3 297 84-411 24-417 (550)
28 3ihm_A Styrene monooxygenase A 99.8 6.5E-20 2.2E-24 189.3 19.8 289 84-406 21-359 (430)
29 2bry_A NEDD9 interacting prote 99.8 6.4E-18 2.2E-22 177.4 17.3 135 83-233 90-236 (497)
30 1yvv_A Amine oxidase, flavin-c 99.8 1.2E-16 4.1E-21 158.9 23.6 278 85-392 2-329 (336)
31 1ryi_A Glycine oxidase; flavop 99.7 7.1E-17 2.4E-21 163.6 18.1 190 167-387 159-360 (382)
32 1y56_B Sarcosine oxidase; dehy 99.7 3.3E-15 1.1E-19 151.3 24.4 194 168-388 145-354 (382)
33 3ps9_A TRNA 5-methylaminomethy 99.7 2.1E-14 7.3E-19 156.4 27.2 81 168-251 413-495 (676)
34 3dme_A Conserved exported prot 99.6 1.5E-14 5.2E-19 145.3 22.7 200 168-386 146-367 (369)
35 2oln_A NIKD protein; flavoprot 99.6 8.7E-15 3E-19 149.1 20.5 64 168-232 149-214 (397)
36 3nyc_A D-arginine dehydrogenas 99.6 5.9E-15 2E-19 149.1 19.0 192 168-386 150-355 (381)
37 2gf3_A MSOX, monomeric sarcosi 99.6 1.1E-14 3.6E-19 147.9 20.6 193 168-387 146-362 (389)
38 2qcu_A Aerobic glycerol-3-phos 99.6 6E-14 2.1E-18 147.5 26.7 204 168-389 145-372 (501)
39 3pvc_A TRNA 5-methylaminomethy 99.6 1.8E-14 6.1E-19 157.3 22.7 81 168-251 408-491 (689)
40 2gag_B Heterotetrameric sarcos 99.6 1.1E-14 3.9E-19 148.5 19.2 191 168-387 170-373 (405)
41 3da1_A Glycerol-3-phosphate de 99.6 3.9E-14 1.3E-18 150.7 22.1 206 168-391 166-393 (561)
42 3dje_A Fructosyl amine: oxygen 99.6 2.3E-13 8E-18 140.4 22.2 62 167-228 156-222 (438)
43 2uzz_A N-methyl-L-tryptophan o 99.6 1E-13 3.5E-18 139.7 18.9 60 168-228 145-205 (372)
44 3c4n_A Uncharacterized protein 99.5 4E-13 1.4E-17 137.3 18.3 146 84-231 35-241 (405)
45 3nlc_A Uncharacterized protein 99.5 8.1E-14 2.8E-18 146.7 10.4 145 81-228 103-278 (549)
46 3v76_A Flavoprotein; structura 99.5 2E-13 6.8E-18 139.8 13.0 138 83-227 25-187 (417)
47 3axb_A Putative oxidoreductase 99.5 6.9E-13 2.4E-17 137.3 16.8 82 168-251 177-278 (448)
48 2cul_A Glucose-inhibited divis 99.4 6.6E-13 2.3E-17 125.0 13.5 126 84-231 2-129 (232)
49 2rgh_A Alpha-glycerophosphate 99.4 4.1E-11 1.4E-15 127.6 28.0 207 168-390 184-412 (571)
50 3kkj_A Amine oxidase, flavin-c 99.4 1.2E-11 4E-16 117.7 21.1 37 85-122 2-38 (336)
51 1c0p_A D-amino acid oxidase; a 99.4 8.1E-12 2.8E-16 125.5 19.7 184 168-390 138-358 (363)
52 2i0z_A NAD(FAD)-utilizing dehy 99.4 2.3E-12 7.9E-17 133.4 15.7 140 82-227 23-191 (447)
53 3ces_A MNMG, tRNA uridine 5-ca 99.4 2.5E-12 8.5E-17 136.6 15.7 143 84-232 27-186 (651)
54 4a9w_A Monooxygenase; baeyer-v 99.4 2.2E-12 7.4E-17 128.7 13.8 129 84-228 2-133 (357)
55 4dgk_A Phytoene dehydrogenase; 99.4 1.6E-10 5.4E-15 121.2 28.4 60 173-232 222-283 (501)
56 2zxi_A TRNA uridine 5-carboxym 99.4 4E-12 1.4E-16 134.4 15.5 141 84-230 26-183 (637)
57 3cp8_A TRNA uridine 5-carboxym 99.4 6.6E-12 2.3E-16 133.2 15.8 141 84-229 20-176 (641)
58 3g3e_A D-amino-acid oxidase; F 99.4 6.6E-12 2.3E-16 125.5 14.9 188 168-391 138-335 (351)
59 2gqf_A Hypothetical protein HI 99.4 3.1E-12 1.1E-16 130.3 12.4 136 84-227 3-168 (401)
60 2ywl_A Thioredoxin reductase r 99.3 6.7E-12 2.3E-16 113.0 12.5 113 85-231 1-114 (180)
61 1pj5_A N,N-dimethylglycine oxi 99.3 1.2E-10 4.1E-15 129.7 25.3 60 168-228 147-208 (830)
62 1rp0_A ARA6, thiazole biosynth 99.3 1.6E-11 5.5E-16 119.1 15.4 128 84-231 38-195 (284)
63 3ab1_A Ferredoxin--NADP reduct 99.3 1.3E-11 4.4E-16 123.8 14.7 121 83-230 12-134 (360)
64 3i6d_A Protoporphyrinogen oxid 99.3 4.6E-11 1.6E-15 124.0 19.2 41 187-227 248-289 (470)
65 2zbw_A Thioredoxin reductase; 99.3 1.4E-11 4.8E-16 122.1 14.4 120 84-230 4-124 (335)
66 2q0l_A TRXR, thioredoxin reduc 99.3 2E-11 6.9E-16 119.6 14.5 117 85-231 1-118 (311)
67 3fbs_A Oxidoreductase; structu 99.3 1.9E-11 6.6E-16 118.7 14.0 114 85-231 2-116 (297)
68 3cty_A Thioredoxin reductase; 99.3 1.7E-11 5.9E-16 120.7 13.4 126 73-230 3-129 (319)
69 4fk1_A Putative thioredoxin re 99.3 2.2E-11 7.4E-16 119.3 13.9 115 82-229 3-119 (304)
70 3nrn_A Uncharacterized protein 99.3 6.3E-11 2.2E-15 121.5 17.4 54 173-228 190-244 (421)
71 3f8d_A Thioredoxin reductase ( 99.3 3.6E-11 1.2E-15 118.2 14.4 116 83-230 13-128 (323)
72 3jsk_A Cypbp37 protein; octame 99.3 2E-11 6.8E-16 120.3 12.4 128 84-231 78-255 (344)
73 3gwf_A Cyclohexanone monooxyge 99.3 3.2E-11 1.1E-15 127.4 14.6 128 83-228 6-148 (540)
74 3qj4_A Renalase; FAD/NAD(P)-bi 99.3 1E-10 3.4E-15 116.5 16.8 132 86-226 2-164 (342)
75 3ka7_A Oxidoreductase; structu 99.2 5.6E-10 1.9E-14 114.4 21.5 56 172-228 196-253 (425)
76 2q7v_A Thioredoxin reductase; 99.2 7.1E-11 2.4E-15 116.6 13.5 117 84-230 7-126 (325)
77 3itj_A Thioredoxin reductase 1 99.2 4.5E-11 1.5E-15 118.3 12.0 124 81-230 18-145 (338)
78 2gjc_A Thiazole biosynthetic e 99.2 2.7E-11 9.4E-16 118.6 10.0 136 83-231 63-243 (326)
79 2gv8_A Monooxygenase; FMO, FAD 99.2 3.6E-11 1.2E-15 124.4 11.4 140 84-228 5-178 (447)
80 4a5l_A Thioredoxin reductase; 99.2 6E-11 2.1E-15 116.3 12.3 120 85-229 4-123 (314)
81 1qo8_A Flavocytochrome C3 fuma 99.2 3.9E-11 1.3E-15 127.9 11.7 145 82-229 118-314 (566)
82 3lzw_A Ferredoxin--NADP reduct 99.2 7.4E-11 2.5E-15 116.5 12.8 116 84-227 6-123 (332)
83 3k7m_X 6-hydroxy-L-nicotine ox 99.2 4.8E-10 1.6E-14 115.1 18.9 43 183-226 215-258 (431)
84 3lov_A Protoporphyrinogen oxid 99.2 1.2E-09 4.3E-14 113.6 21.7 40 187-227 249-289 (475)
85 4ap3_A Steroid monooxygenase; 99.2 1.1E-10 3.7E-15 123.6 13.3 135 83-227 19-159 (549)
86 1y0p_A Fumarate reductase flav 99.2 1.2E-10 4E-15 124.3 13.4 144 82-228 123-318 (571)
87 1w4x_A Phenylacetone monooxyge 99.2 2.3E-10 7.8E-15 121.3 15.1 135 84-228 15-155 (542)
88 3d1c_A Flavin-containing putat 99.2 4.2E-11 1.4E-15 120.3 8.7 138 84-228 3-144 (369)
89 1vdc_A NTR, NADPH dependent th 99.2 7E-11 2.4E-15 117.0 9.8 120 84-231 7-128 (333)
90 1fl2_A Alkyl hydroperoxide red 99.2 1.4E-10 4.9E-15 113.5 11.8 114 85-230 1-118 (310)
91 3nks_A Protoporphyrinogen oxid 99.1 1.1E-09 3.6E-14 114.1 17.6 53 174-227 236-290 (477)
92 2a87_A TRXR, TR, thioredoxin r 99.1 2.8E-10 9.6E-15 112.9 12.4 115 83-230 12-129 (335)
93 3uox_A Otemo; baeyer-villiger 99.1 1.8E-10 6E-15 121.9 11.3 133 83-228 7-148 (545)
94 2ivd_A PPO, PPOX, protoporphyr 99.1 4.3E-09 1.5E-13 109.6 21.0 39 83-122 14-52 (478)
95 1trb_A Thioredoxin reductase; 99.1 2.5E-10 8.5E-15 112.2 10.9 114 84-229 4-118 (320)
96 1hyu_A AHPF, alkyl hydroperoxi 99.1 6.5E-10 2.2E-14 117.1 13.3 115 83-229 210-328 (521)
97 3s5w_A L-ornithine 5-monooxyge 99.1 7.5E-11 2.6E-15 122.5 5.9 143 84-229 29-194 (463)
98 2vvm_A Monoamine oxidase N; FA 99.1 1.1E-07 3.7E-12 99.4 29.5 55 173-227 256-312 (495)
99 4at0_A 3-ketosteroid-delta4-5a 99.1 1.3E-09 4.4E-14 114.6 14.6 55 173-227 203-264 (510)
100 4gcm_A TRXR, thioredoxin reduc 99.0 8.3E-10 2.8E-14 108.3 12.0 113 84-229 5-118 (312)
101 1s3e_A Amine oxidase [flavin-c 99.0 2.5E-08 8.7E-13 105.0 23.0 43 185-227 225-268 (520)
102 2a8x_A Dihydrolipoyl dehydroge 99.0 3.1E-10 1.1E-14 117.9 7.4 136 85-230 3-149 (464)
103 1d4d_A Flavocytochrome C fumar 99.0 5.6E-09 1.9E-13 111.2 16.8 144 83-229 124-319 (572)
104 2xve_A Flavin-containing monoo 99.0 1.7E-09 5.8E-14 112.3 11.3 137 86-228 3-167 (464)
105 3r9u_A Thioredoxin reductase; 99.0 2.8E-09 9.7E-14 104.2 12.2 114 84-229 3-120 (315)
106 1kf6_A Fumarate reductase flav 99.0 3.3E-09 1.1E-13 113.4 12.9 144 84-231 4-201 (602)
107 2e5v_A L-aspartate oxidase; ar 98.9 3.3E-09 1.1E-13 110.3 11.8 139 87-231 1-180 (472)
108 2wdq_A Succinate dehydrogenase 98.9 9.7E-09 3.3E-13 109.6 14.2 58 172-229 143-208 (588)
109 1chu_A Protein (L-aspartate ox 98.9 4.4E-09 1.5E-13 111.1 10.8 58 172-229 138-210 (540)
110 3l8k_A Dihydrolipoyl dehydroge 98.9 4.8E-09 1.7E-13 109.0 11.0 131 85-229 4-146 (466)
111 1dxl_A Dihydrolipoamide dehydr 98.9 2.7E-09 9.3E-14 110.9 9.0 140 83-231 4-155 (470)
112 2h88_A Succinate dehydrogenase 98.9 1.2E-08 4E-13 109.3 14.0 59 171-229 154-219 (621)
113 3qfa_A Thioredoxin reductase 1 98.9 6.8E-09 2.3E-13 109.3 10.9 140 82-229 29-187 (519)
114 1ojt_A Surface protein; redox- 98.8 2.2E-09 7.5E-14 112.0 6.7 136 84-229 5-162 (482)
115 1v59_A Dihydrolipoamide dehydr 98.8 2.4E-09 8.3E-14 111.6 6.8 136 84-227 4-157 (478)
116 4gde_A UDP-galactopyranose mut 98.8 8E-09 2.7E-13 108.4 9.8 53 172-226 222-275 (513)
117 1q1r_A Putidaredoxin reductase 98.8 1.3E-08 4.5E-13 104.6 10.9 112 85-231 4-118 (431)
118 1ebd_A E3BD, dihydrolipoamide 98.8 4.7E-09 1.6E-13 108.7 7.6 136 85-230 3-148 (455)
119 1zmd_A Dihydrolipoyl dehydroge 98.8 5.6E-09 1.9E-13 108.7 8.1 139 84-230 5-155 (474)
120 2bs2_A Quinol-fumarate reducta 98.8 2.8E-08 9.5E-13 107.1 13.2 58 172-229 158-222 (660)
121 3urh_A Dihydrolipoyl dehydroge 98.8 8.1E-09 2.8E-13 108.0 8.6 137 82-226 22-169 (491)
122 2bcg_G Secretory pathway GDP d 98.8 3.6E-08 1.2E-12 101.9 13.3 55 173-228 243-301 (453)
123 3lad_A Dihydrolipoamide dehydr 98.8 9.2E-09 3.2E-13 107.1 8.7 137 84-228 2-155 (476)
124 3o0h_A Glutathione reductase; 98.8 5.9E-09 2E-13 108.9 6.2 129 85-228 26-167 (484)
125 2cdu_A NADPH oxidase; flavoenz 98.8 8.8E-09 3E-13 106.5 7.5 113 86-229 1-119 (452)
126 1jnr_A Adenylylsulfate reducta 98.7 2.5E-08 8.5E-13 107.6 10.9 143 84-229 21-220 (643)
127 3ics_A Coenzyme A-disulfide re 98.7 1.3E-08 4.5E-13 108.8 8.5 116 82-229 33-154 (588)
128 2qae_A Lipoamide, dihydrolipoy 98.7 8.6E-09 2.9E-13 107.1 6.7 138 85-229 2-150 (468)
129 3dgh_A TRXR-1, thioredoxin red 98.7 2.1E-08 7.2E-13 104.6 9.8 139 83-229 7-164 (483)
130 3gyx_A Adenylylsulfate reducta 98.7 3E-08 1E-12 106.8 11.0 59 171-229 165-235 (662)
131 3dk9_A Grase, GR, glutathione 98.7 3.3E-09 1.1E-13 110.5 3.3 138 82-229 17-162 (478)
132 2hqm_A GR, grase, glutathione 98.7 2.3E-08 7.9E-13 104.2 9.7 143 83-229 9-162 (479)
133 3klj_A NAD(FAD)-dependent dehy 98.7 1.1E-08 3.6E-13 103.6 6.8 112 82-229 6-118 (385)
134 3dgz_A Thioredoxin reductase 2 98.7 7.3E-09 2.5E-13 108.3 5.7 138 83-228 4-160 (488)
135 3cgb_A Pyridine nucleotide-dis 98.7 5.3E-08 1.8E-12 101.5 12.1 112 85-229 36-154 (480)
136 2bc0_A NADH oxidase; flavoprot 98.7 3.4E-08 1.2E-12 103.2 10.7 113 84-229 34-151 (490)
137 3lxd_A FAD-dependent pyridine 98.7 1.8E-08 6.1E-13 103.0 8.3 111 84-229 8-121 (415)
138 3sx6_A Sulfide-quinone reducta 98.7 1.2E-08 4.1E-13 105.1 7.0 111 85-231 4-116 (437)
139 3oc4_A Oxidoreductase, pyridin 98.7 2.2E-08 7.6E-13 103.5 8.9 112 86-230 3-118 (452)
140 3g5s_A Methylenetetrahydrofola 98.7 3.3E-08 1.1E-12 98.0 9.1 112 86-226 2-136 (443)
141 3iwa_A FAD-dependent pyridine 98.7 3.1E-08 1E-12 103.0 9.5 119 85-229 3-127 (472)
142 2yqu_A 2-oxoglutarate dehydrog 98.7 1.4E-08 4.8E-13 105.1 6.7 134 85-229 1-143 (455)
143 4dna_A Probable glutathione re 98.7 1.2E-08 4E-13 106.0 5.8 134 84-228 4-146 (463)
144 4b63_A L-ornithine N5 monooxyg 98.7 2.7E-08 9.2E-13 104.2 8.5 146 81-230 35-217 (501)
145 1zk7_A HGII, reductase, mercur 98.7 1.9E-08 6.4E-13 104.5 7.1 136 84-229 3-152 (467)
146 1xdi_A RV3303C-LPDA; reductase 98.7 1.1E-08 3.9E-13 107.1 5.5 140 85-229 2-158 (499)
147 2v3a_A Rubredoxin reductase; a 98.7 1.4E-07 4.7E-12 95.3 12.9 99 85-228 145-244 (384)
148 3kd9_A Coenzyme A disulfide re 98.7 4.5E-08 1.5E-12 101.1 9.4 110 84-229 2-116 (449)
149 2r9z_A Glutathione amide reduc 98.7 3.1E-08 1.1E-12 102.8 7.8 134 84-229 3-144 (463)
150 2yg5_A Putrescine oxidase; oxi 98.6 1.4E-07 4.8E-12 97.3 12.7 38 84-122 4-41 (453)
151 1nhp_A NADH peroxidase; oxidor 98.6 2.5E-08 8.6E-13 102.9 7.0 111 86-229 1-117 (447)
152 3p1w_A Rabgdi protein; GDI RAB 98.6 1.4E-07 4.7E-12 97.3 12.4 54 173-226 257-313 (475)
153 1xhc_A NADH oxidase /nitrite r 98.6 3.4E-08 1.2E-12 99.2 7.3 106 85-228 8-114 (367)
154 1ges_A Glutathione reductase; 98.6 3.5E-08 1.2E-12 101.9 7.3 135 84-229 3-145 (450)
155 4b1b_A TRXR, thioredoxin reduc 98.6 3.7E-08 1.3E-12 103.7 7.4 137 85-229 42-199 (542)
156 3fg2_P Putative rubredoxin red 98.6 5.7E-08 1.9E-12 98.9 7.9 108 86-228 2-111 (404)
157 2eq6_A Pyruvate dehydrogenase 98.6 3.7E-07 1.3E-11 94.6 13.7 98 86-229 170-273 (464)
158 1d5t_A Guanine nucleotide diss 98.6 2.3E-07 7.8E-12 95.3 11.8 56 173-228 235-291 (433)
159 2yqu_A 2-oxoglutarate dehydrog 98.6 2.9E-07 1E-11 95.1 12.7 97 86-228 168-265 (455)
160 3ic9_A Dihydrolipoamide dehydr 98.6 3.7E-08 1.3E-12 103.0 5.7 34 85-119 8-41 (492)
161 3h28_A Sulfide-quinone reducta 98.6 4.8E-08 1.7E-12 100.3 6.4 109 85-229 2-111 (430)
162 3ef6_A Toluene 1,2-dioxygenase 98.6 2.1E-07 7.1E-12 94.9 11.0 108 86-229 3-113 (410)
163 4gut_A Lysine-specific histone 98.6 2.8E-07 9.7E-12 100.9 12.6 41 185-225 542-583 (776)
164 2gqw_A Ferredoxin reductase; f 98.6 1.6E-07 5.4E-12 95.7 10.0 107 84-229 6-115 (408)
165 3ntd_A FAD-dependent pyridine 98.6 1.3E-06 4.4E-11 92.8 17.4 96 86-227 152-267 (565)
166 3ntd_A FAD-dependent pyridine 98.6 5E-08 1.7E-12 103.8 6.4 113 86-230 2-120 (565)
167 2eq6_A Pyruvate dehydrogenase 98.6 6.3E-08 2.2E-12 100.4 6.8 35 84-119 5-39 (464)
168 3h8l_A NADH oxidase; membrane 98.6 9.7E-08 3.3E-12 97.3 8.1 108 86-229 2-115 (409)
169 1y56_A Hypothetical protein PH 98.5 1.3E-07 4.3E-12 98.9 8.9 112 84-230 107-222 (493)
170 1onf_A GR, grase, glutathione 98.5 6.3E-08 2.2E-12 101.4 6.0 34 85-119 2-35 (500)
171 2x8g_A Thioredoxin glutathione 98.5 2.4E-07 8.2E-12 99.2 10.5 35 83-118 105-139 (598)
172 1m6i_A Programmed cell death p 98.5 1.4E-07 4.9E-12 98.5 8.4 131 82-228 8-145 (493)
173 1mo9_A ORF3; nucleotide bindin 98.5 2.6E-07 9E-12 97.2 10.4 133 82-229 40-188 (523)
174 2v3a_A Rubredoxin reductase; a 98.5 1.1E-07 3.9E-12 96.0 7.2 108 85-229 4-115 (384)
175 3hyw_A Sulfide-quinone reducta 98.5 4.5E-08 1.5E-12 100.5 3.1 104 87-227 4-109 (430)
176 3vrd_B FCCB subunit, flavocyto 98.5 4.6E-07 1.6E-11 91.9 10.3 105 87-229 4-110 (401)
177 1ges_A Glutathione reductase; 98.5 6.9E-07 2.4E-11 92.2 11.8 97 86-228 168-266 (450)
178 1lvl_A Dihydrolipoamide dehydr 98.4 3.4E-07 1.2E-11 94.7 9.1 34 84-118 4-37 (458)
179 3k30_A Histamine dehydrogenase 98.4 4.9E-07 1.7E-11 98.4 10.7 39 82-121 388-426 (690)
180 1fec_A Trypanothione reductase 98.4 2.9E-07 1E-11 96.1 8.6 33 84-116 2-34 (490)
181 2r9z_A Glutathione amide reduc 98.4 1.4E-06 4.7E-11 90.3 12.8 98 86-229 167-266 (463)
182 3lxd_A FAD-dependent pyridine 98.4 1.4E-06 4.8E-11 88.9 12.5 99 85-228 152-252 (415)
183 4g6h_A Rotenone-insensitive NA 98.4 6.1E-07 2.1E-11 93.8 10.0 113 84-229 41-171 (502)
184 3fg2_P Putative rubredoxin red 98.4 1.6E-06 5.5E-11 88.1 12.7 98 86-228 143-242 (404)
185 1nhp_A NADH peroxidase; oxidor 98.4 1.1E-06 3.8E-11 90.5 11.5 99 84-228 148-247 (447)
186 1ebd_A E3BD, dihydrolipoamide 98.4 1.4E-06 4.8E-11 90.0 12.2 98 85-228 170-271 (455)
187 1v59_A Dihydrolipoamide dehydr 98.4 1.5E-06 5.3E-11 90.3 12.5 98 85-228 183-288 (478)
188 3ics_A Coenzyme A-disulfide re 98.4 5.6E-06 1.9E-10 88.4 16.4 94 86-227 188-282 (588)
189 3fpz_A Thiazole biosynthetic e 98.4 2.3E-07 7.9E-12 91.5 5.0 46 82-127 62-108 (326)
190 2gag_A Heterotetrameric sarcos 98.4 1.3E-06 4.3E-11 98.5 11.4 112 84-229 127-255 (965)
191 3o0h_A Glutathione reductase; 98.3 2.1E-06 7.3E-11 89.3 12.2 98 85-228 191-289 (484)
192 3ef6_A Toluene 1,2-dioxygenase 98.3 9.4E-07 3.2E-11 90.0 9.3 98 86-228 144-242 (410)
193 1b37_A Protein (polyamine oxid 98.3 3.5E-06 1.2E-10 87.4 13.2 42 186-227 228-270 (472)
194 3kd9_A Coenzyme A disulfide re 98.3 8E-06 2.7E-10 84.1 15.3 95 86-227 149-244 (449)
195 1q1r_A Putidaredoxin reductase 98.3 2.5E-06 8.7E-11 87.4 11.3 98 86-228 150-251 (431)
196 2wpf_A Trypanothione reductase 98.3 2.3E-07 7.8E-12 97.0 3.4 34 84-117 6-39 (495)
197 1mo9_A ORF3; nucleotide bindin 98.3 4.3E-06 1.5E-10 87.9 12.5 98 86-229 215-318 (523)
198 3iwa_A FAD-dependent pyridine 98.3 3.3E-06 1.1E-10 87.6 11.5 99 85-228 159-259 (472)
199 2gqw_A Ferredoxin reductase; f 98.3 4E-06 1.4E-10 85.3 11.8 95 85-228 145-240 (408)
200 1zmd_A Dihydrolipoyl dehydroge 98.3 5.2E-06 1.8E-10 86.2 12.8 98 86-228 179-283 (474)
201 4eqs_A Coenzyme A disulfide re 98.3 4.7E-06 1.6E-10 85.5 12.1 111 87-229 2-118 (437)
202 1xdi_A RV3303C-LPDA; reductase 98.3 5.1E-06 1.7E-10 86.8 12.4 98 86-229 183-281 (499)
203 2qae_A Lipoamide, dihydrolipoy 98.2 5.2E-06 1.8E-10 86.0 12.4 97 86-228 175-277 (468)
204 1ojt_A Surface protein; redox- 98.2 3.6E-06 1.2E-10 87.6 11.1 99 85-229 185-288 (482)
205 1fec_A Trypanothione reductase 98.2 4.4E-06 1.5E-10 87.1 11.5 97 86-228 188-289 (490)
206 2cdu_A NADPH oxidase; flavoenz 98.2 8.9E-06 3E-10 83.8 13.6 98 86-228 150-248 (452)
207 3urh_A Dihydrolipoyl dehydroge 98.2 8.1E-06 2.8E-10 85.1 13.0 97 86-228 199-301 (491)
208 2hqm_A GR, grase, glutathione 98.2 4.7E-06 1.6E-10 86.6 11.2 97 86-228 186-286 (479)
209 3q9t_A Choline dehydrogenase a 98.2 1.1E-05 3.7E-10 85.6 13.7 37 83-120 4-41 (577)
210 1lvl_A Dihydrolipoamide dehydr 98.2 3.3E-06 1.1E-10 87.2 9.7 96 86-229 172-270 (458)
211 3oc4_A Oxidoreductase, pyridin 98.2 9.4E-06 3.2E-10 83.7 12.9 97 86-228 148-245 (452)
212 1zk7_A HGII, reductase, mercur 98.2 1E-05 3.4E-10 83.8 13.0 95 86-228 177-272 (467)
213 1trb_A Thioredoxin reductase; 98.2 9.9E-06 3.4E-10 79.0 12.3 94 86-227 146-247 (320)
214 1dxl_A Dihydrolipoamide dehydr 98.2 4.3E-06 1.5E-10 86.6 9.9 97 86-228 178-280 (470)
215 3cgb_A Pyridine nucleotide-dis 98.2 6.3E-06 2.1E-10 85.7 11.0 97 85-228 186-283 (480)
216 1onf_A GR, grase, glutathione 98.2 1.2E-05 4.2E-10 83.9 13.2 98 86-229 177-277 (500)
217 2wpf_A Trypanothione reductase 98.2 8.8E-06 3E-10 84.9 11.8 97 86-228 192-293 (495)
218 3ic9_A Dihydrolipoamide dehydr 98.1 1.6E-05 5.4E-10 82.9 12.9 97 85-228 174-275 (492)
219 1ps9_A 2,4-dienoyl-COA reducta 98.1 2.6E-06 8.9E-11 92.4 7.0 38 83-121 371-408 (671)
220 2a8x_A Dihydrolipoyl dehydroge 98.1 1.4E-05 4.7E-10 82.7 11.8 97 86-228 172-272 (464)
221 2bc0_A NADH oxidase; flavoprot 98.1 1.1E-05 3.8E-10 84.0 11.0 98 85-228 194-292 (490)
222 1m6i_A Programmed cell death p 98.1 1.5E-05 5.2E-10 83.0 12.0 99 86-228 181-283 (493)
223 3lad_A Dihydrolipoamide dehydr 98.1 2.2E-05 7.4E-10 81.5 12.2 97 86-228 181-281 (476)
224 2b9w_A Putative aminooxidase; 98.0 3.6E-06 1.2E-10 85.9 6.1 38 84-122 5-43 (424)
225 4dna_A Probable glutathione re 98.0 1.9E-05 6.5E-10 81.6 11.5 97 85-228 170-269 (463)
226 1xhc_A NADH oxidase /nitrite r 98.0 9.5E-06 3.3E-10 81.2 8.8 91 86-228 144-235 (367)
227 1lqt_A FPRA; NADP+ derivative, 98.0 3.9E-07 1.3E-11 94.1 -1.6 99 84-226 2-107 (456)
228 3itj_A Thioredoxin reductase 1 98.0 1.6E-05 5.6E-10 77.9 10.1 91 85-227 173-271 (338)
229 3ab1_A Ferredoxin--NADP reduct 98.0 2.2E-05 7.5E-10 78.1 11.0 94 86-227 164-263 (360)
230 1rsg_A FMS1 protein; FAD bindi 98.0 3.1E-06 1.1E-10 88.8 4.8 40 83-123 6-46 (516)
231 3hdq_A UDP-galactopyranose mut 98.0 4.8E-06 1.7E-10 84.0 5.7 38 83-121 27-64 (397)
232 2e1m_A L-glutamate oxidase; L- 98.0 5.8E-06 2E-10 82.7 6.1 37 84-121 43-80 (376)
233 3s5w_A L-ornithine 5-monooxyge 98.0 9.1E-06 3.1E-10 83.9 7.7 126 85-227 227-377 (463)
234 2zbw_A Thioredoxin reductase; 98.0 4.1E-05 1.4E-09 75.1 11.9 95 85-227 152-252 (335)
235 1v0j_A UDP-galactopyranose mut 98.0 4.9E-06 1.7E-10 84.4 5.2 37 84-121 6-43 (399)
236 1cjc_A Protein (adrenodoxin re 98.0 9.2E-07 3.1E-11 91.4 -0.3 99 84-227 5-106 (460)
237 1gte_A Dihydropyrimidine dehyd 98.0 1.1E-06 3.9E-11 99.5 0.4 99 84-226 186-286 (1025)
238 2jae_A L-amino acid oxidase; o 98.0 5.9E-06 2E-10 86.0 5.7 52 173-226 240-295 (489)
239 3d1c_A Flavin-containing putat 98.0 4.4E-05 1.5E-09 76.0 11.8 104 86-228 167-273 (369)
240 2q0l_A TRXR, thioredoxin reduc 98.0 6.4E-05 2.2E-09 72.9 12.7 90 86-227 144-241 (311)
241 3dgh_A TRXR-1, thioredoxin red 97.9 5.1E-05 1.7E-09 78.8 11.7 96 86-228 188-290 (483)
242 1i8t_A UDP-galactopyranose mut 97.9 7E-06 2.4E-10 82.2 4.9 36 85-121 1-36 (367)
243 3dk9_A Grase, GR, glutathione 97.9 6.6E-05 2.3E-09 77.8 12.4 97 86-228 188-294 (478)
244 3cty_A Thioredoxin reductase; 97.9 6E-05 2E-09 73.5 11.4 90 86-227 156-252 (319)
245 4b1b_A TRXR, thioredoxin reduc 97.9 7.2E-05 2.5E-09 78.6 12.1 98 86-230 224-322 (542)
246 2q7v_A Thioredoxin reductase; 97.9 0.0001 3.5E-09 72.0 12.5 90 86-227 153-249 (325)
247 1sez_A Protoporphyrinogen oxid 97.9 1E-05 3.6E-10 84.4 5.5 38 84-122 12-49 (504)
248 1fl2_A Alkyl hydroperoxide red 97.9 6.5E-05 2.2E-09 72.8 10.8 90 86-227 145-242 (310)
249 2vdc_G Glutamate synthase [NAD 97.9 1.3E-05 4.3E-10 82.7 5.9 99 83-227 120-219 (456)
250 2bi7_A UDP-galactopyranose mut 97.8 1.2E-05 4E-10 81.1 5.5 36 85-121 3-38 (384)
251 3t37_A Probable dehydrogenase; 97.8 1.1E-05 3.9E-10 84.7 4.7 38 83-120 15-52 (526)
252 3fbs_A Oxidoreductase; structu 97.8 2.9E-05 9.9E-10 74.6 7.2 86 85-227 141-226 (297)
253 1kdg_A CDH, cellobiose dehydro 97.8 1.6E-05 5.4E-10 84.1 5.3 37 83-120 5-41 (546)
254 3r9u_A Thioredoxin reductase; 97.8 0.00016 5.6E-09 69.9 12.1 91 86-227 148-244 (315)
255 4dsg_A UDP-galactopyranose mut 97.8 1.9E-05 6.4E-10 82.2 5.6 38 83-121 7-45 (484)
256 3dgz_A Thioredoxin reductase 2 97.8 0.00013 4.6E-09 75.8 11.9 96 86-228 186-288 (488)
257 2iid_A L-amino-acid oxidase; f 97.7 2E-05 6.9E-10 82.1 5.3 38 84-122 32-69 (498)
258 3l8k_A Dihydrolipoyl dehydroge 97.7 0.00014 4.9E-09 75.1 11.7 95 86-228 173-273 (466)
259 3pl8_A Pyranose 2-oxidase; sub 97.7 2E-05 6.7E-10 84.5 5.2 38 84-122 45-82 (623)
260 3f8d_A Thioredoxin reductase ( 97.7 0.00014 4.7E-09 70.7 10.8 90 86-227 155-251 (323)
261 4eqs_A Coenzyme A disulfide re 97.7 7.3E-05 2.5E-09 76.6 9.1 92 86-227 148-240 (437)
262 3lzw_A Ferredoxin--NADP reduct 97.7 9.6E-05 3.3E-09 72.2 8.5 91 85-227 154-250 (332)
263 1vdc_A NTR, NADPH dependent th 97.6 0.0003 1E-08 68.8 11.9 91 85-227 159-259 (333)
264 3qvp_A Glucose oxidase; oxidor 97.6 3.7E-05 1.3E-09 81.4 5.0 36 84-119 18-53 (583)
265 1o94_A Tmadh, trimethylamine d 97.6 6.2E-05 2.1E-09 82.3 6.7 37 83-120 387-423 (729)
266 2a87_A TRXR, TR, thioredoxin r 97.6 0.00019 6.5E-09 70.5 9.5 91 86-227 156-252 (335)
267 3qfa_A Thioredoxin reductase 1 97.6 0.00055 1.9E-08 71.7 13.0 95 87-228 212-316 (519)
268 3gwf_A Cyclohexanone monooxyge 97.5 0.00014 4.9E-09 76.5 8.3 35 85-120 178-212 (540)
269 4g6h_A Rotenone-insensitive NA 97.5 0.00025 8.7E-09 73.9 9.9 95 87-227 219-332 (502)
270 2z3y_A Lysine-specific histone 97.5 7.7E-05 2.6E-09 80.6 6.1 40 82-122 104-143 (662)
271 2xag_A Lysine-specific histone 97.5 0.0001 3.6E-09 81.3 6.2 39 83-122 276-314 (852)
272 2x8g_A Thioredoxin glutathione 97.5 0.00093 3.2E-08 71.2 13.4 95 87-228 288-396 (598)
273 3uox_A Otemo; baeyer-villiger 97.5 1.7E-05 5.9E-10 83.6 -0.1 36 85-121 185-220 (545)
274 3klj_A NAD(FAD)-dependent dehy 97.4 4.4E-05 1.5E-09 76.9 2.6 85 86-228 147-232 (385)
275 3fim_B ARYL-alcohol oxidase; A 97.4 6.1E-05 2.1E-09 79.6 3.5 37 85-121 2-38 (566)
276 1n4w_A CHOD, cholesterol oxida 97.4 0.00011 3.8E-09 76.7 5.1 36 84-120 4-39 (504)
277 1ju2_A HydroxynitrIle lyase; f 97.4 7.4E-05 2.5E-09 78.6 3.7 35 84-120 25-59 (536)
278 1hyu_A AHPF, alkyl hydroperoxi 97.3 0.00078 2.7E-08 70.5 10.9 90 86-227 356-453 (521)
279 1coy_A Cholesterol oxidase; ox 97.3 0.00017 5.8E-09 75.3 5.8 38 82-120 8-45 (507)
280 2jbv_A Choline oxidase; alcoho 97.3 0.0002 6.9E-09 75.5 5.2 37 84-121 12-49 (546)
281 1gpe_A Protein (glucose oxidas 97.2 0.00023 7.9E-09 75.7 5.3 39 83-121 22-60 (587)
282 4ap3_A Steroid monooxygenase; 97.2 0.00017 5.9E-09 76.0 3.7 36 85-121 191-226 (549)
283 2gv8_A Monooxygenase; FMO, FAD 97.2 0.0006 2.1E-08 69.9 7.7 78 86-227 213-292 (447)
284 2xve_A Flavin-containing monoo 97.1 0.0013 4.3E-08 67.9 9.1 79 86-227 198-276 (464)
285 3ayj_A Pro-enzyme of L-phenyla 97.0 0.00031 1.1E-08 75.6 3.6 36 85-121 56-100 (721)
286 2gag_A Heterotetrameric sarcos 96.8 0.0015 5.3E-08 73.4 7.7 88 86-228 285-384 (965)
287 1cjc_A Protein (adrenodoxin re 96.8 0.0036 1.2E-07 64.4 9.9 130 85-227 145-333 (460)
288 2vdc_G Glutamate synthase [NAD 96.7 0.0013 4.4E-08 67.7 5.7 35 85-120 264-299 (456)
289 1lqt_A FPRA; NADP+ derivative, 96.7 0.0031 1.1E-07 64.7 8.4 128 85-227 147-326 (456)
290 1ps9_A 2,4-dienoyl-COA reducta 96.7 0.0066 2.3E-07 65.5 11.1 131 85-227 494-628 (671)
291 1gte_A Dihydropyrimidine dehyd 96.7 0.0078 2.7E-07 68.2 12.0 90 87-226 334-441 (1025)
292 4a9w_A Monooxygenase; baeyer-v 96.7 0.0021 7.1E-08 63.1 6.5 33 85-119 163-195 (357)
293 1vg0_A RAB proteins geranylger 96.7 0.0017 5.7E-08 69.1 6.1 38 84-122 7-44 (650)
294 1o94_A Tmadh, trimethylamine d 96.7 0.0014 4.7E-08 71.6 5.5 94 86-227 529-646 (729)
295 4a5l_A Thioredoxin reductase; 96.4 0.021 7.3E-07 54.8 11.8 33 86-119 153-185 (314)
296 3fwz_A Inner membrane protein 96.2 0.005 1.7E-07 52.0 5.3 37 82-119 4-40 (140)
297 3h8l_A NADH oxidase; membrane 96.1 0.013 4.6E-07 58.9 8.5 50 174-227 220-270 (409)
298 3h28_A Sulfide-quinone reducta 96.0 0.007 2.4E-07 61.5 6.2 51 175-227 203-256 (430)
299 1w4x_A Phenylacetone monooxyge 96.0 0.0023 8E-08 67.3 2.2 36 85-121 186-221 (542)
300 2g1u_A Hypothetical protein TM 95.9 0.0075 2.6E-07 51.9 4.8 35 84-119 18-52 (155)
301 3sx6_A Sulfide-quinone reducta 95.5 0.025 8.4E-07 57.6 7.9 50 176-227 212-269 (437)
302 3llv_A Exopolyphosphatase-rela 95.4 0.013 4.3E-07 49.4 4.4 33 86-119 7-39 (141)
303 1lss_A TRK system potassium up 95.3 0.013 4.5E-07 48.9 4.2 33 86-119 5-37 (140)
304 1id1_A Putative potassium chan 95.2 0.022 7.6E-07 48.7 5.4 34 85-119 3-36 (153)
305 4b63_A L-ornithine N5 monooxyg 95.0 0.044 1.5E-06 56.8 7.9 35 86-120 247-282 (501)
306 4gcm_A TRXR, thioredoxin reduc 94.9 0.021 7.3E-07 54.9 5.0 33 87-120 147-179 (312)
307 3ic5_A Putative saccharopine d 94.9 0.024 8.2E-07 45.6 4.5 33 86-119 6-39 (118)
308 4fk1_A Putative thioredoxin re 94.6 0.06 2.1E-06 51.6 7.3 86 86-225 147-234 (304)
309 3c85_A Putative glutathione-re 94.5 0.029 1E-06 49.5 4.3 34 85-119 39-73 (183)
310 2hmt_A YUAA protein; RCK, KTN, 93.9 0.05 1.7E-06 45.4 4.4 33 86-119 7-39 (144)
311 3ado_A Lambda-crystallin; L-gu 93.8 0.045 1.5E-06 53.0 4.4 34 85-119 6-39 (319)
312 3l4b_C TRKA K+ channel protien 93.8 0.041 1.4E-06 50.1 3.8 32 87-119 2-33 (218)
313 1y56_A Hypothetical protein PH 93.7 0.074 2.5E-06 55.0 6.1 49 180-228 265-314 (493)
314 2dpo_A L-gulonate 3-dehydrogen 93.3 0.063 2.1E-06 52.1 4.4 35 84-119 5-39 (319)
315 3hyw_A Sulfide-quinone reducta 93.0 1.2 4.1E-05 44.8 13.7 52 174-227 202-256 (430)
316 3i83_A 2-dehydropantoate 2-red 92.7 0.1 3.5E-06 50.6 4.9 32 86-118 3-34 (320)
317 1f0y_A HCDH, L-3-hydroxyacyl-C 92.6 0.12 4.2E-06 49.5 5.4 33 86-119 16-48 (302)
318 4dio_A NAD(P) transhydrogenase 92.6 0.11 3.6E-06 51.9 5.0 34 85-119 190-223 (405)
319 4e12_A Diketoreductase; oxidor 92.6 0.12 4.1E-06 49.1 5.3 33 86-119 5-37 (283)
320 2raf_A Putative dinucleotide-b 92.5 0.13 4.5E-06 46.4 5.2 35 85-120 19-53 (209)
321 1ks9_A KPA reductase;, 2-dehyd 92.4 0.12 4.3E-06 48.8 5.2 33 87-120 2-34 (291)
322 2hjr_A Malate dehydrogenase; m 92.3 0.14 4.7E-06 49.9 5.3 34 85-119 14-48 (328)
323 2x5o_A UDP-N-acetylmuramoylala 92.3 0.088 3E-06 53.5 4.1 33 87-120 7-39 (439)
324 3lk7_A UDP-N-acetylmuramoylala 92.2 0.096 3.3E-06 53.5 4.2 33 86-119 10-42 (451)
325 3dfz_A SIRC, precorrin-2 dehyd 92.1 0.17 5.8E-06 46.2 5.3 32 85-117 31-62 (223)
326 4g65_A TRK system potassium up 92.1 0.07 2.4E-06 54.6 3.0 35 85-120 3-37 (461)
327 3k6j_A Protein F01G10.3, confi 92.1 0.17 5.7E-06 51.5 5.8 35 85-120 54-88 (460)
328 3ghy_A Ketopantoate reductase 92.0 0.14 4.7E-06 50.0 5.0 33 85-118 3-35 (335)
329 1lld_A L-lactate dehydrogenase 92.0 0.14 4.8E-06 49.5 5.0 33 85-118 7-41 (319)
330 3doj_A AT3G25530, dehydrogenas 92.0 0.14 4.9E-06 49.3 5.0 35 84-119 20-54 (310)
331 3gvi_A Malate dehydrogenase; N 91.9 0.16 5.5E-06 49.2 5.3 37 82-119 4-41 (324)
332 3hn2_A 2-dehydropantoate 2-red 91.9 0.12 4.1E-06 49.8 4.4 32 86-118 3-34 (312)
333 1pzg_A LDH, lactate dehydrogen 91.8 0.17 5.7E-06 49.3 5.3 34 85-119 9-43 (331)
334 2z3y_A Lysine-specific histone 91.8 4.2 0.00014 43.4 16.7 42 185-226 409-457 (662)
335 4a7p_A UDP-glucose dehydrogena 91.7 0.16 5.5E-06 51.6 5.2 36 84-120 7-42 (446)
336 2ew2_A 2-dehydropantoate 2-red 91.7 0.16 5.4E-06 48.7 4.9 33 86-119 4-36 (316)
337 2y0c_A BCEC, UDP-glucose dehyd 91.4 0.17 5.7E-06 52.1 5.0 35 84-119 7-41 (478)
338 3oj0_A Glutr, glutamyl-tRNA re 91.4 0.094 3.2E-06 44.2 2.6 32 86-118 22-53 (144)
339 1kyq_A Met8P, siroheme biosynt 91.4 0.11 3.7E-06 49.1 3.3 33 85-118 13-45 (274)
340 3p2y_A Alanine dehydrogenase/p 91.4 0.12 4.3E-06 51.0 3.8 34 85-119 184-217 (381)
341 3k96_A Glycerol-3-phosphate de 91.3 0.18 6.2E-06 49.7 4.9 34 85-119 29-62 (356)
342 3g79_A NDP-N-acetyl-D-galactos 91.2 0.18 6.2E-06 51.6 5.0 35 85-120 18-54 (478)
343 2uyy_A N-PAC protein; long-cha 91.1 0.23 7.8E-06 47.8 5.4 34 85-119 30-63 (316)
344 3gg2_A Sugar dehydrogenase, UD 91.0 0.16 5.6E-06 51.7 4.4 33 86-119 3-35 (450)
345 1l7d_A Nicotinamide nucleotide 91.0 0.2 6.9E-06 49.9 5.0 34 85-119 172-205 (384)
346 1x13_A NAD(P) transhydrogenase 90.9 0.18 6.2E-06 50.5 4.6 34 85-119 172-205 (401)
347 1bg6_A N-(1-D-carboxylethyl)-L 90.9 0.21 7.2E-06 48.9 5.0 33 86-119 5-37 (359)
348 3l9w_A Glutathione-regulated p 90.9 0.17 5.9E-06 50.9 4.4 34 86-120 5-38 (413)
349 2ewd_A Lactate dehydrogenase,; 90.8 0.2 7E-06 48.4 4.7 33 86-119 5-38 (317)
350 1jw9_B Molybdopterin biosynthe 90.8 0.18 6E-06 47.0 4.1 34 85-119 31-65 (249)
351 3vtf_A UDP-glucose 6-dehydroge 90.7 0.22 7.6E-06 50.3 5.0 37 82-119 18-54 (444)
352 3dtt_A NADP oxidoreductase; st 90.6 0.2 6.8E-06 46.4 4.4 38 82-120 16-53 (245)
353 1t2d_A LDH-P, L-lactate dehydr 90.5 0.28 9.6E-06 47.5 5.4 33 86-119 5-38 (322)
354 3g17_A Similar to 2-dehydropan 90.5 0.16 5.6E-06 48.4 3.7 33 86-119 3-35 (294)
355 1zcj_A Peroxisomal bifunctiona 90.5 0.3 1E-05 49.9 5.9 34 85-119 37-70 (463)
356 4dll_A 2-hydroxy-3-oxopropiona 90.4 0.2 6.7E-06 48.6 4.2 35 84-119 30-64 (320)
357 3qha_A Putative oxidoreductase 90.3 0.23 8E-06 47.4 4.6 35 85-120 15-49 (296)
358 3g0o_A 3-hydroxyisobutyrate de 90.2 0.22 7.7E-06 47.7 4.4 34 85-119 7-40 (303)
359 1pjc_A Protein (L-alanine dehy 90.2 0.24 8.3E-06 48.8 4.7 33 86-119 168-200 (361)
360 3pef_A 6-phosphogluconate dehy 90.1 0.25 8.5E-06 46.9 4.6 33 86-119 2-34 (287)
361 3eag_A UDP-N-acetylmuramate:L- 90.0 0.27 9.4E-06 47.7 4.8 33 86-119 5-38 (326)
362 4huj_A Uncharacterized protein 89.8 0.16 5.4E-06 46.3 2.9 34 85-119 23-57 (220)
363 2v6b_A L-LDH, L-lactate dehydr 89.8 0.29 1E-05 47.0 4.9 32 87-119 2-35 (304)
364 1guz_A Malate dehydrogenase; o 89.7 0.32 1.1E-05 46.9 5.0 32 87-119 2-35 (310)
365 3tl2_A Malate dehydrogenase; c 89.7 0.33 1.1E-05 46.9 5.1 34 84-118 7-41 (315)
366 2aef_A Calcium-gated potassium 89.6 0.14 4.9E-06 46.9 2.4 33 85-119 9-41 (234)
367 1mv8_A GMD, GDP-mannose 6-dehy 89.6 0.21 7.1E-06 50.7 3.8 32 87-119 2-33 (436)
368 3p7m_A Malate dehydrogenase; p 89.6 0.38 1.3E-05 46.6 5.4 34 85-119 5-39 (321)
369 1vpd_A Tartronate semialdehyde 89.4 0.28 9.5E-06 46.8 4.4 33 86-119 6-38 (299)
370 4ffl_A PYLC; amino acid, biosy 89.3 0.34 1.2E-05 47.6 5.1 34 87-121 3-36 (363)
371 3l6d_A Putative oxidoreductase 89.3 0.37 1.3E-05 46.2 5.2 34 85-119 9-42 (306)
372 1sez_A Protoporphyrinogen oxid 89.3 3 0.0001 42.6 12.5 41 187-227 256-308 (504)
373 3ggo_A Prephenate dehydrogenas 89.1 0.37 1.3E-05 46.5 5.0 35 84-119 32-68 (314)
374 2vns_A Metalloreductase steap3 89.0 0.39 1.3E-05 43.4 4.9 34 85-119 28-61 (215)
375 2eez_A Alanine dehydrogenase; 89.0 0.33 1.1E-05 48.0 4.7 33 86-119 167-199 (369)
376 3hwr_A 2-dehydropantoate 2-red 89.0 0.29 1E-05 47.2 4.2 33 85-119 19-51 (318)
377 2a9f_A Putative malic enzyme ( 89.0 0.4 1.4E-05 47.3 5.1 36 82-118 185-221 (398)
378 1z82_A Glycerol-3-phosphate de 88.9 0.38 1.3E-05 46.8 5.0 34 84-118 13-46 (335)
379 2rcy_A Pyrroline carboxylate r 88.9 0.38 1.3E-05 44.8 4.8 35 85-120 4-42 (262)
380 2pv7_A T-protein [includes: ch 88.9 0.58 2E-05 44.7 6.2 33 86-119 22-55 (298)
381 3ktd_A Prephenate dehydrogenas 88.8 0.38 1.3E-05 47.0 4.8 35 84-119 7-41 (341)
382 4e21_A 6-phosphogluconate dehy 88.7 0.33 1.1E-05 47.7 4.4 34 85-119 22-55 (358)
383 1ur5_A Malate dehydrogenase; o 88.7 0.43 1.5E-05 45.9 5.2 33 86-119 3-36 (309)
384 3pdu_A 3-hydroxyisobutyrate de 88.7 0.25 8.5E-06 46.9 3.4 32 87-119 3-34 (287)
385 4gwg_A 6-phosphogluconate dehy 88.6 0.42 1.4E-05 49.0 5.2 35 85-120 4-38 (484)
386 1evy_A Glycerol-3-phosphate de 88.5 0.32 1.1E-05 47.9 4.2 32 87-119 17-48 (366)
387 2zyd_A 6-phosphogluconate dehy 88.5 0.35 1.2E-05 49.7 4.5 36 83-119 13-48 (480)
388 3phh_A Shikimate dehydrogenase 88.4 0.47 1.6E-05 44.6 5.0 34 85-119 118-151 (269)
389 1y6j_A L-lactate dehydrogenase 88.3 0.46 1.6E-05 45.9 5.0 34 85-119 7-42 (318)
390 2vhw_A Alanine dehydrogenase; 88.3 0.4 1.4E-05 47.6 4.7 33 85-118 168-200 (377)
391 1nyt_A Shikimate 5-dehydrogena 88.3 0.43 1.5E-05 44.9 4.7 32 86-118 120-151 (271)
392 3ond_A Adenosylhomocysteinase; 88.1 0.35 1.2E-05 49.3 4.2 32 86-118 266-297 (488)
393 3mog_A Probable 3-hydroxybutyr 88.1 0.47 1.6E-05 48.7 5.2 33 86-119 6-38 (483)
394 3ius_A Uncharacterized conserv 88.0 0.41 1.4E-05 45.0 4.5 33 86-119 6-38 (286)
395 4ezb_A Uncharacterized conserv 88.0 0.42 1.4E-05 46.1 4.6 33 86-119 25-58 (317)
396 2h78_A Hibadh, 3-hydroxyisobut 88.0 0.41 1.4E-05 45.7 4.4 33 86-119 4-36 (302)
397 2p4q_A 6-phosphogluconate dehy 87.9 0.49 1.7E-05 48.8 5.3 35 84-119 9-43 (497)
398 1jay_A Coenzyme F420H2:NADP+ o 87.8 0.52 1.8E-05 42.2 4.8 32 87-119 2-34 (212)
399 1txg_A Glycerol-3-phosphate de 87.8 0.36 1.2E-05 46.7 4.0 30 87-117 2-31 (335)
400 2qyt_A 2-dehydropantoate 2-red 87.6 0.31 1.1E-05 46.7 3.4 31 86-117 9-45 (317)
401 3gpi_A NAD-dependent epimerase 87.6 0.59 2E-05 43.9 5.3 34 86-120 4-37 (286)
402 3pqe_A L-LDH, L-lactate dehydr 87.6 0.5 1.7E-05 45.8 4.8 33 85-118 5-39 (326)
403 3e8x_A Putative NAD-dependent 87.6 0.47 1.6E-05 43.2 4.5 36 83-119 19-55 (236)
404 2f1k_A Prephenate dehydrogenas 87.3 0.56 1.9E-05 44.1 4.9 32 87-119 2-33 (279)
405 2egg_A AROE, shikimate 5-dehyd 87.3 0.55 1.9E-05 44.9 4.8 32 86-118 142-174 (297)
406 3qsg_A NAD-binding phosphogluc 87.2 0.44 1.5E-05 45.9 4.1 34 84-118 23-57 (312)
407 3d0o_A L-LDH 1, L-lactate dehy 87.1 0.51 1.7E-05 45.6 4.6 35 83-118 4-40 (317)
408 1ldn_A L-lactate dehydrogenase 87.1 0.58 2E-05 45.2 4.9 34 84-118 5-40 (316)
409 2q3e_A UDP-glucose 6-dehydroge 87.0 0.43 1.5E-05 48.8 4.1 33 86-119 6-40 (467)
410 3dfu_A Uncharacterized protein 87.0 0.21 7E-06 45.9 1.5 32 85-117 6-37 (232)
411 2izz_A Pyrroline-5-carboxylate 86.9 0.6 2.1E-05 45.1 5.0 33 86-119 23-59 (322)
412 1vl6_A Malate oxidoreductase; 86.9 0.53 1.8E-05 46.4 4.6 34 84-118 191-225 (388)
413 3tri_A Pyrroline-5-carboxylate 86.9 0.68 2.3E-05 43.8 5.3 34 85-119 3-39 (280)
414 4gbj_A 6-phosphogluconate dehy 86.9 0.4 1.4E-05 45.8 3.7 33 87-120 7-39 (297)
415 4gx0_A TRKA domain protein; me 86.7 0.57 1.9E-05 49.1 5.0 35 86-121 349-383 (565)
416 3vku_A L-LDH, L-lactate dehydr 86.7 0.56 1.9E-05 45.4 4.6 36 82-118 6-43 (326)
417 1x0v_A GPD-C, GPDH-C, glycerol 86.7 0.32 1.1E-05 47.6 2.9 34 86-120 9-49 (354)
418 1a5z_A L-lactate dehydrogenase 86.7 0.49 1.7E-05 45.7 4.2 32 87-119 2-35 (319)
419 3gvp_A Adenosylhomocysteinase 86.6 0.5 1.7E-05 47.3 4.2 34 85-119 220-253 (435)
420 2pgd_A 6-phosphogluconate dehy 86.6 0.62 2.1E-05 47.8 5.1 33 86-119 3-35 (482)
421 2gf2_A Hibadh, 3-hydroxyisobut 86.6 0.56 1.9E-05 44.5 4.5 32 87-119 2-33 (296)
422 1oju_A MDH, malate dehydrogena 86.5 0.42 1.4E-05 45.6 3.6 32 87-119 2-35 (294)
423 2i6t_A Ubiquitin-conjugating e 86.5 0.53 1.8E-05 45.1 4.3 34 85-119 14-49 (303)
424 3pid_A UDP-glucose 6-dehydroge 86.2 0.57 2E-05 47.2 4.5 33 85-119 36-68 (432)
425 2o3j_A UDP-glucose 6-dehydroge 86.2 0.56 1.9E-05 48.2 4.5 34 85-119 9-44 (481)
426 3h8v_A Ubiquitin-like modifier 86.2 0.56 1.9E-05 44.6 4.2 34 84-118 35-69 (292)
427 3don_A Shikimate dehydrogenase 86.1 0.54 1.9E-05 44.4 4.1 33 86-119 118-151 (277)
428 3ce6_A Adenosylhomocysteinase; 86.1 0.53 1.8E-05 48.3 4.2 34 85-119 274-307 (494)
429 2wtb_A MFP2, fatty acid multif 86.1 0.65 2.2E-05 50.2 5.1 33 86-119 313-345 (725)
430 3nep_X Malate dehydrogenase; h 86.0 0.61 2.1E-05 44.9 4.4 32 87-119 2-35 (314)
431 2g5c_A Prephenate dehydrogenas 85.8 0.7 2.4E-05 43.5 4.8 32 87-119 3-36 (281)
432 3rui_A Ubiquitin-like modifier 85.8 0.77 2.6E-05 44.6 5.0 35 84-119 33-68 (340)
433 3c24_A Putative oxidoreductase 85.7 0.9 3.1E-05 42.9 5.5 33 86-119 12-45 (286)
434 1yqg_A Pyrroline-5-carboxylate 85.7 0.61 2.1E-05 43.4 4.2 32 87-119 2-34 (263)
435 3c7a_A Octopine dehydrogenase; 85.7 0.51 1.8E-05 47.1 3.9 30 86-116 3-33 (404)
436 2iz1_A 6-phosphogluconate dehy 85.6 0.78 2.7E-05 47.0 5.3 34 85-119 5-38 (474)
437 3cky_A 2-hydroxymethyl glutara 85.5 0.55 1.9E-05 44.7 3.8 33 86-119 5-37 (301)
438 1yj8_A Glycerol-3-phosphate de 85.5 0.5 1.7E-05 46.7 3.7 34 86-120 22-62 (375)
439 3ew7_A LMO0794 protein; Q8Y8U8 85.4 0.84 2.9E-05 40.8 4.9 32 87-119 2-34 (221)
440 1zud_1 Adenylyltransferase THI 85.4 0.71 2.4E-05 42.9 4.5 33 85-118 28-61 (251)
441 1np3_A Ketol-acid reductoisome 85.4 0.82 2.8E-05 44.5 5.1 33 86-119 17-49 (338)
442 1pjq_A CYSG, siroheme synthase 85.4 0.75 2.6E-05 46.9 4.9 32 86-118 13-44 (457)
443 3d4o_A Dipicolinate synthase s 85.3 0.74 2.5E-05 43.8 4.6 34 85-119 155-188 (293)
444 3q2o_A Phosphoribosylaminoimid 85.3 1.2 4E-05 44.2 6.3 34 86-120 15-48 (389)
445 3ojo_A CAP5O; rossmann fold, c 85.3 0.53 1.8E-05 47.5 3.7 33 86-119 12-44 (431)
446 2we8_A Xanthine dehydrogenase; 85.2 1.1 3.8E-05 44.4 5.9 35 85-120 204-238 (386)
447 2ahr_A Putative pyrroline carb 85.2 0.68 2.3E-05 43.0 4.2 33 86-119 4-36 (259)
448 1pgj_A 6PGDH, 6-PGDH, 6-phosph 85.1 0.76 2.6E-05 47.1 4.9 33 86-119 2-34 (478)
449 1p77_A Shikimate 5-dehydrogena 85.1 0.56 1.9E-05 44.2 3.6 32 86-118 120-151 (272)
450 3ldh_A Lactate dehydrogenase; 85.1 0.9 3.1E-05 44.0 5.1 33 85-118 21-55 (330)
451 2rir_A Dipicolinate synthase, 85.1 0.77 2.6E-05 43.8 4.6 33 85-118 157-189 (300)
452 1zej_A HBD-9, 3-hydroxyacyl-CO 85.1 0.69 2.4E-05 44.1 4.2 34 84-119 11-44 (293)
453 3gt0_A Pyrroline-5-carboxylate 85.0 0.81 2.8E-05 42.2 4.6 33 86-119 3-39 (247)
454 2hk9_A Shikimate dehydrogenase 84.7 0.69 2.3E-05 43.6 4.1 32 86-118 130-161 (275)
455 1hyh_A L-hicdh, L-2-hydroxyiso 84.7 0.71 2.4E-05 44.3 4.2 32 86-118 2-35 (309)
456 1hdo_A Biliverdin IX beta redu 84.7 0.99 3.4E-05 39.7 4.9 34 86-120 4-38 (206)
457 2yjz_A Metalloreductase steap4 85.0 0.19 6.3E-06 45.2 0.0 36 84-120 18-53 (201)
458 1nvt_A Shikimate 5'-dehydrogen 84.5 0.79 2.7E-05 43.4 4.4 31 86-118 129-159 (287)
459 4aj2_A L-lactate dehydrogenase 84.4 1.1 3.9E-05 43.3 5.5 34 84-118 18-53 (331)
460 3orq_A N5-carboxyaminoimidazol 84.3 1.5 5E-05 43.4 6.4 35 85-120 12-46 (377)
461 3u62_A Shikimate dehydrogenase 84.2 0.98 3.3E-05 42.0 4.8 32 87-119 110-142 (253)
462 3d1l_A Putative NADP oxidoredu 84.2 0.78 2.7E-05 42.7 4.2 33 86-119 11-44 (266)
463 2zqz_A L-LDH, L-lactate dehydr 84.1 0.93 3.2E-05 43.9 4.7 37 81-118 5-43 (326)
464 3jyo_A Quinate/shikimate dehyd 84.1 0.96 3.3E-05 42.8 4.7 33 85-118 127-160 (283)
465 3ego_A Probable 2-dehydropanto 84.0 1 3.5E-05 43.1 5.0 32 86-119 3-34 (307)
466 1wdk_A Fatty oxidation complex 84.0 0.78 2.7E-05 49.6 4.5 34 85-119 314-347 (715)
467 3k5i_A Phosphoribosyl-aminoimi 83.9 0.95 3.2E-05 45.2 4.9 34 84-119 23-56 (403)
468 3tnl_A Shikimate dehydrogenase 83.8 0.95 3.2E-05 43.6 4.6 32 86-118 155-187 (315)
469 3h2s_A Putative NADH-flavin re 83.8 1.1 3.6E-05 40.3 4.8 32 87-119 2-34 (224)
470 2d5c_A AROE, shikimate 5-dehyd 83.7 1.1 3.6E-05 41.9 4.8 31 87-118 118-148 (263)
471 1ez4_A Lactate dehydrogenase; 83.7 0.93 3.2E-05 43.7 4.5 34 84-118 4-39 (318)
472 3zwc_A Peroxisomal bifunctiona 83.6 1.1 3.7E-05 48.4 5.5 37 82-119 313-349 (742)
473 4id9_A Short-chain dehydrogena 83.6 1.1 3.6E-05 43.4 5.0 39 82-121 16-55 (347)
474 3h5n_A MCCB protein; ubiquitin 83.6 0.78 2.7E-05 45.0 4.0 33 85-118 118-151 (353)
475 4b4o_A Epimerase family protei 82.8 1.3 4.4E-05 41.9 5.2 33 87-120 2-35 (298)
476 3h9u_A Adenosylhomocysteinase; 82.8 0.93 3.2E-05 45.4 4.2 34 85-119 211-244 (436)
477 3o8q_A Shikimate 5-dehydrogena 82.7 1.2 4.1E-05 42.1 4.8 33 85-118 126-159 (281)
478 3pwz_A Shikimate dehydrogenase 82.6 1.2 4.3E-05 41.8 4.8 33 85-118 120-153 (272)
479 2jae_A L-amino acid oxidase; o 82.5 1.7 5.8E-05 44.3 6.2 38 84-122 10-47 (489)
480 3two_A Mannitol dehydrogenase; 82.4 1.2 4.1E-05 43.3 4.9 33 86-119 178-210 (348)
481 4e4t_A Phosphoribosylaminoimid 82.4 1.3 4.4E-05 44.5 5.2 35 85-120 35-69 (419)
482 2dbq_A Glyoxylate reductase; D 82.4 1.9 6.5E-05 41.8 6.3 34 85-119 150-183 (334)
483 1i36_A Conserved hypothetical 82.3 1 3.4E-05 41.9 4.1 30 87-117 2-31 (264)
484 3n58_A Adenosylhomocysteinase; 82.3 0.99 3.4E-05 45.3 4.2 33 86-119 248-280 (464)
485 1lu9_A Methylene tetrahydromet 82.2 1.2 4.1E-05 42.1 4.6 32 86-118 120-152 (287)
486 1vg0_A RAB proteins geranylger 82.1 2.4 8.2E-05 45.0 7.2 54 171-224 377-434 (650)
487 3fi9_A Malate dehydrogenase; s 82.1 1.5 5.1E-05 42.7 5.3 33 85-118 8-43 (343)
488 2d4a_B Malate dehydrogenase; a 82.0 1.1 3.9E-05 42.9 4.4 32 87-119 1-33 (308)
489 3fbt_A Chorismate mutase and s 81.9 1.1 3.8E-05 42.3 4.2 33 85-118 122-155 (282)
490 3b1f_A Putative prephenate deh 81.9 1.1 3.6E-05 42.4 4.1 34 85-119 6-41 (290)
491 1yb4_A Tartronic semialdehyde 81.8 0.81 2.8E-05 43.3 3.3 32 86-119 4-35 (295)
492 1gpj_A Glutamyl-tRNA reductase 81.8 0.97 3.3E-05 45.2 4.0 33 85-118 167-200 (404)
493 3vh1_A Ubiquitin-like modifier 81.8 1.3 4.5E-05 46.2 5.0 34 84-118 326-360 (598)
494 1leh_A Leucine dehydrogenase; 81.8 1.3 4.5E-05 43.5 4.8 32 85-117 173-204 (364)
495 3r6d_A NAD-dependent epimerase 81.7 1.8 6.1E-05 38.8 5.5 32 87-119 7-40 (221)
496 3vps_A TUNA, NAD-dependent epi 81.7 1.5 5.2E-05 41.6 5.2 35 85-120 7-42 (321)
497 4gsl_A Ubiquitin-like modifier 81.6 1.3 4.6E-05 46.2 5.0 35 84-119 325-360 (615)
498 2pzm_A Putative nucleotide sug 81.5 1.8 6E-05 41.6 5.7 34 85-119 20-54 (330)
499 3dhn_A NAD-dependent epimerase 81.4 1.3 4.4E-05 39.8 4.4 34 86-120 5-39 (227)
500 3t4e_A Quinate/shikimate dehyd 81.3 1.4 4.6E-05 42.4 4.6 32 86-118 149-181 (312)
No 1
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=100.00 E-value=2.9e-35 Score=300.16 Aligned_cols=343 Identities=15% Similarity=0.186 Sum_probs=230.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccc--hhHhhhhcCch---hhhhhccCceEEEecCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGV--WVDEFEDIGLV---DCLDKTWPMTCVFINDH 157 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~--~~~~l~~~~~~---~~~~~~~~~~~~~~~~~ 157 (503)
|++|||+|||||||||++|+.|++ +|++|+||||++..+.+..||. ....++.+++. ..+...+....++.++.
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~-~G~~V~v~Er~~~~~~~~~~g~~l~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAK-YGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCCCCCCCCceecccCHHHHHHcCCCchhhhhhcccceEEEEeCCC
Confidence 567999999999999999999999 9999999999887766666654 33456666662 23344455555555444
Q ss_pred cccc------cCCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe--CCC--cEEEeceEEecCCC
Q 010693 158 KTKY------LDRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC--DDG--NEIKASLIVDASGF 225 (503)
Q Consensus 158 ~~~~------~~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~--~~g--~~i~a~~vI~A~G~ 225 (503)
.... .....++ ++|..+++.|.+.+.+.|++++ +++|+++..+++.+.... .++ .+++||+||+|||.
T Consensus 81 ~~~~~~~~~~~~~~~~~~i~R~~~~~~L~~~a~~~G~~~~~~~~v~~~~~~~~~~~~v~~~~~~~~~~~~a~~vIgAdG~ 160 (397)
T 3oz2_A 81 KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp SSCEEEECSSSSCCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred ceEeeccccccCCceeEEEEHHHHHHHHHHHHHhcCcEEeeeeeeeeeeeccceeeeeeecccccceEEEEeEEEeCCcc
Confidence 3211 1223344 8999999999999999999999 999999998887654432 233 36999999999999
Q ss_pred CcccccccCCCCC---ccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecc
Q 010693 226 ASSFVEYDKPRNH---GYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEET 302 (503)
Q Consensus 226 ~s~vr~~~~~~~~---~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~ 302 (503)
+|.+++..+.... .................+++...++ +... .. .+|.|++|.+++...++..
T Consensus 161 ~S~vr~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~----------~~---~g~~~~~~~~~~~~~vg~~ 226 (397)
T 3oz2_A 161 ESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFY-LGSI----------AP---AGYIWVFPKGEGMANVGIG 226 (397)
T ss_dssp TCHHHHHHTCGGGCCCGGGEEEEEEEEEESCCCCTTEEEEE-CSTT----------ST---TEEEEEEEEETTEEEEEEE
T ss_pred ccHHHHHcCCCcccccceeeeeeEEEEeeccccCcccceee-eecc----------CC---CceEEEeecccceeEEEEe
Confidence 9999986554322 2223333444444444555544332 1111 11 3689999999987665433
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhc-CCccceEeecceecccCCCCC-CCCCCCEEEeccCCCCcCCcccHHHHHHHHhHH
Q 010693 303 SLVSRPVLSYKEVKRRMAARLRHM-GIRVKRVIEDEKCLIPMGGPL-PVIPQSVMAIGSTSGLVHPSTGYMVARTMALAP 380 (503)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~i~~~~~~~~p~~~~~-~~~~~~v~liGDAa~~~~P~~G~G~~~al~~a~ 380 (503)
.... .......+.+.+.+.+... ++......+...+.+|+.... +...+|++++|||||.++|++|+|++.||++|.
T Consensus 227 ~~~~-~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAA~~~~P~~G~Gi~~A~~~g~ 305 (397)
T 3oz2_A 227 SSIN-WIHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGM 305 (397)
T ss_dssp EETT-TSCSHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHH
T ss_pred eccc-hhhhhhhHHHHHHHHHHhCccccccceeeeeeccccccCcccceeeeeEEEcccccccCCCCcchhHHHHHHHHH
Confidence 2211 1223334444444444332 112223344445667765443 346789999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC-CCCCchhhHHHHhhcCcHHHHHHHHHHHHhHHHHhCCChhhHHHHHHHHcc
Q 010693 381 ALADAIAECLGSTR-MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFD 445 (503)
Q Consensus 381 ~lA~~l~~~l~~~~-~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~ 445 (503)
.||++|.++++.++ +...|+.|++.|++.|..+..+... .++.+..++++.++.+++.+.+
T Consensus 306 ~~A~~i~~~l~~~~~~~~~L~~Ye~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 367 (397)
T 3oz2_A 306 YAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWV----AKEKLAMLSDDTLDKLVDIVSE 367 (397)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHTCCHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHhCCHHHHHHHHHHHhH
Confidence 99999999997765 3457889999998766544332222 3455677888777666655543
No 2
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=100.00 E-value=2.7e-34 Score=293.76 Aligned_cols=345 Identities=15% Similarity=0.175 Sum_probs=237.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCccc--chhHhhhhcCchh---hhhhccCceEEEecCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYG--VWVDEFEDIGLVD---CLDKTWPMTCVFINDH 157 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g--~~~~~l~~~~~~~---~~~~~~~~~~~~~~~~ 157 (503)
|.++||+||||||+|+++|+.|++ +|++|+|||+.+..+.+..++ .+...++.+++.+ .....+....+...+.
T Consensus 2 m~~~dVvIvG~G~aGl~~A~~La~-~G~~V~l~E~~~~~g~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~ 80 (397)
T 3cgv_A 2 METYDVLVVGGGPGGSTAARYAAK-YGLKTLMIEKRPEIGSPVRCGEGLSKGILNEADIKADRSFIANEVKGARIYGPSE 80 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSTTCSCCSCCEEETHHHHHTTCCCCTTTEEEEESEEEEECTTC
T ss_pred CccCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCCCCCCcccccccCHHHHHHcCCCCChHHhhhhcceEEEEcCCC
Confidence 346999999999999999999999 999999999987655444443 3445567777632 2233444444443333
Q ss_pred cc-cccC-----CCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEe---CCCcEEEeceEEecCCC
Q 010693 158 KT-KYLD-----RPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVC---DDGNEIKASLIVDASGF 225 (503)
Q Consensus 158 ~~-~~~~-----~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~---~~g~~i~a~~vI~A~G~ 225 (503)
.. .... .++++ +++..+.+.|.+.+.+.|++++ +++|+++..+++.+. |.+ .++.+++||+||+|+|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~~~~~~a~~vV~A~G~ 160 (397)
T 3cgv_A 81 KRPIILQSEKAGNEVGYVLERDKFDKHLAALAAKAGADVWVKSPALGVIKENGKVAGAKIRHNNEIVDVRAKMVIAADGF 160 (397)
T ss_dssp SSCEEEC-----CCCEEEECHHHHHHHHHHHHHHHTCEEESSCCEEEEEEETTEEEEEEEEETTEEEEEEEEEEEECCCT
T ss_pred CEEEEEeccccCCceeEEEeHHHHHHHHHHHHHhCCCEEEECCEEEEEEEeCCEEEEEEEEECCeEEEEEcCEEEECCCc
Confidence 22 1111 23344 8999999999999999999999 999999999888776 666 34558999999999999
Q ss_pred CcccccccCCCC-C--ccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecc
Q 010693 226 ASSFVEYDKPRN-H--GYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEET 302 (503)
Q Consensus 226 ~s~vr~~~~~~~-~--~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~ 302 (503)
+|.+++..+... . ..+...++...+....++++...++ +... . . .+|+|++|.+++.+.++.+
T Consensus 161 ~s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--------~-~----~g~~~~~P~~~~~~~vg~~ 226 (397)
T 3cgv_A 161 ESEFGRWAGLKSVILARNDIISALQYRMINVDVDPDYTDFY-LGSI--------A-P----AGYIWVFPKGEGMANVGIG 226 (397)
T ss_dssp TCHHHHHHTCCTTCCCGGGEEEEEEEEEESCCCCTTEEEEE-CSTT--------S-T----TEEEEEEEEETTEEEEEEE
T ss_pred chHhHHhcCCCccCCChhheeEEEEEEeccCCCCCCcEEEE-eCCc--------C-C----CceEEEEECCCCeEEEEEE
Confidence 999888665433 2 3334455555555445555444332 1110 0 1 3789999999987765544
Q ss_pred cccCCCCCCHHHHHHHHHHHHhhc-CCccceEeecceecccCCCCCCC-CCCCEEEeccCCCCcCCcccHHHHHHHHhHH
Q 010693 303 SLVSRPVLSYKEVKRRMAARLRHM-GIRVKRVIEDEKCLIPMGGPLPV-IPQSVMAIGSTSGLVHPSTGYMVARTMALAP 380 (503)
Q Consensus 303 ~~~~~~~~~~~~~~~~l~~~l~~~-~~~~~~i~~~~~~~~p~~~~~~~-~~~~v~liGDAa~~~~P~~G~G~~~al~~a~ 380 (503)
..... ........+.+.+++... ++...++.+...+.+|+.+..+. ..+|++++|||||.++|++|+|++.|+++|.
T Consensus 227 ~~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~v~liGDAa~~~~P~~G~G~~~a~~~a~ 305 (397)
T 3cgv_A 227 SSINW-IHNRFELKNYLDRFIENHPGLKKGQDIQLVTGGVSVSKVKMPITMPGLMLVGDAARLIDPITGGGIANAIVSGM 305 (397)
T ss_dssp EETTT-CSCHHHHHHHHHHHHHTCHHHHTSEEEEEEEEEEECCCCCSCCEETTEEECGGGGTCSCTTTCCCHHHHHHHHH
T ss_pred ecccc-ccCCCCHHHHHHHHHHhCcCCCCCeEEeeeeeeeecCCCccceeeCCEEEEEccccCCCCCCCCCHHHHHHHHH
Confidence 33221 122344444555554432 12334556666778898655543 6789999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC-CCCCchhhHHHHhhcCcHHHHHHHHHHHHhHHHHhCCChhhHHHHHHHHccCC
Q 010693 381 ALADAIAECLGSTR-MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFDLN 447 (503)
Q Consensus 381 ~lA~~l~~~l~~~~-~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~l~ 447 (503)
.||+.|.+++..++ +...++.|++.|+..+..+.+..+.+ ...+..++++...+++..+.+.+
T Consensus 306 ~la~~l~~~~~~~~~~~~~l~~Y~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 369 (397)
T 3cgv_A 306 YAAQVTKEAIESNDYSPQMMQKYEKLIKERFERKHLRNWVA----KEKLAMLSDDTLDKLVDIVSEQV 369 (397)
T ss_dssp HHHHHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTCCHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHhCCHHHHHHHHHhcCccc
Confidence 99999999885443 34568889988886554444433333 34567888888888887766543
No 3
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=100.00 E-value=1.1e-31 Score=279.75 Aligned_cols=353 Identities=17% Similarity=0.168 Sum_probs=223.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccc--hhHhhhhcCchhh----hhhccCceEEEecCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGV--WVDEFEDIGLVDC----LDKTWPMTCVFINDH 157 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~--~~~~l~~~~~~~~----~~~~~~~~~~~~~~~ 157 (503)
++||+||||||||+++|+.|++ +|++|+|||+.+.... ...+|. ....++.+++... +...+.+..++.++.
T Consensus 6 ~~dVvIVGaG~aGl~aA~~La~-~G~~V~vlE~~~~~~~g~~~~g~~l~~~~l~~lg~~~~~~~~~~~~~~~~~~~~~~~ 84 (453)
T 3atr_A 6 KYDVLIIGGGFAGSSAAYQLSR-RGLKILLVDSKPWNRIGDKPCGDAVSKAHFDKLGMPYPKGEELENKINGIKLYSPDM 84 (453)
T ss_dssp ECSEEEECCSHHHHHHHHHHSS-SSCCEEEECSSCGGGTTCSCCCCEEEHHHHHHTTCCCCCGGGEEEEEEEEEEECTTS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCCCCCCcccccccccHHHHHHhcCCCCchHHHHhhhcceEEECCCC
Confidence 5899999999999999999999 9999999999865321 122332 4455667765321 122233333332222
Q ss_pred cccccCCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEeC---CCc--EEEeceEEecCCCCccc
Q 010693 158 KTKYLDRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVCD---DGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 158 ~~~~~~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~---~g~--~i~a~~vI~A~G~~s~v 229 (503)
.........++ ++|..+.+.|.+.+.+.|++++ +++|+++..+++.+. |++. +|+ +++||+||+|||.+|.+
T Consensus 85 ~~~~~~~~~~~~i~r~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~v~gv~~~~~~~G~~~~~~ad~VV~AdG~~s~v 164 (453)
T 3atr_A 85 QTVWTVNGEGFELNAPLYNQRVLKEAQDRGVEIWDLTTAMKPIFEDGYVKGAVLFNRRTNEELTVYSKVVVEATGYSRSF 164 (453)
T ss_dssp SCEEEEEEEEEEECHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTTEEEEEECSEEEECCGGGCTT
T ss_pred ceEEeECCCcEEEcHHHHHHHHHHHHHHcCCEEEeCcEEEEEEEECCEEEEEEEEEcCCCceEEEEcCEEEECcCCchhh
Confidence 11110011233 8999999999999999999999 999999998887654 4443 665 79999999999999999
Q ss_pred ccccCCCC------C--ccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEec
Q 010693 230 VEYDKPRN------H--GYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEE 301 (503)
Q Consensus 230 r~~~~~~~------~--~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~ 301 (503)
++..+... . .+...+...+.+..+..+++...++ +... .. . .+|+|++|.+++.+.++.
T Consensus 165 r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-------~~-~----~g~~~~~P~~~~~~~vg~ 231 (453)
T 3atr_A 165 RSKLPPELPITEDLDDKDADVAYREVLLTKEDIEDHDYLRIF-IDQE-------TS-P----GGYWWYFPKGKNKVNVGL 231 (453)
T ss_dssp GGGSCTTSGGGCCCCGGGEEEEEEEEEEESSCCTTTTEEEEE-CCTT-------TS-T----TSCEEEEEEETTEEEEEE
T ss_pred HHhcCCCCCcccCCCcccceeeeEEEEecCCCccCCCeEEEE-ECCC-------CC-C----CcEEEEEECCCCeEEEEE
Confidence 98655432 1 1122222222333222223322121 1100 01 1 258999999988766544
Q ss_pred ccccCCCCCC-HHHHHHHHHHHHhhcCCccceEeecceecccCCCCCCC-CCCCEEEeccCCCCcCCcccHHHHHHHHhH
Q 010693 302 TSLVSRPVLS-YKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPV-IPQSVMAIGSTSGLVHPSTGYMVARTMALA 379 (503)
Q Consensus 302 ~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~~~~-~~~~v~liGDAa~~~~P~~G~G~~~al~~a 379 (503)
.........+ .+.+.+.+.+..+.+ ...++.....+.+|+..+.+. ..+|++++|||||.++|++|+|++.|+++|
T Consensus 232 ~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~p~~~~~~~~~~~~v~lvGDAAh~~~P~~G~G~~~Ai~da 309 (453)
T 3atr_A 232 GIQGGMGYPSIHEYYKKYLDKYAPDV--DKSKLLVKGGALVPTRRPLYTMAWNGIIVIGDSGFTVNPVHGGGKGSAMISG 309 (453)
T ss_dssp EEESSSCCCCHHHHHHHHHHHHCTTE--EEEEEEEEEEEEEECSSCCSCSEETTEEECGGGGTCSCTTTCCCHHHHHHHH
T ss_pred EecCCCCCCCHHHHHHHHHHhhhhhc--CCCeEEeccceeccCCCCCCceecCCEEEEeCcccCCCCCccccHHHHHHHH
Confidence 3222211122 233333333322222 112344444566777555443 578999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCC-CCCCchhhHHHHhhcCcHHHHHHHHHHHHhHHHHhCCChhhHHHHHHHHcc---CCccccccc-
Q 010693 380 PALADAIAECLGSTR-MIRGRPLHQKVWNGLWPIDRRCNREFYSFGMETLLKLDLKGTRRFFDAFFD---LNPYYWHGF- 454 (503)
Q Consensus 380 ~~lA~~l~~~l~~~~-~~~~l~~y~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~f~~~~~---l~~~~~~~f- 454 (503)
..||++|.+++..++ +...++.|++.|+..+....+....+. +.+..+.++.+ +++++ ++...+.+|
T Consensus 310 ~~la~~l~~~l~~~~~~~~~L~~Y~~~r~~~~~~~~~~~~~~~----~~~~~~~~~~~----~~~~~~~~l~~~~~~~~i 381 (453)
T 3atr_A 310 YCAAKAILSAFETGDFSASGLWDMNICYVNEYGAKQASLDIFR----RFLQKLSNDDI----NYGMKKKIIKEEDLLEAS 381 (453)
T ss_dssp HHHHHHHHHHHHHTCCSTTTTTHHHHHHHHHTHHHHHHHHHHH----HHHTTCCHHHH----HHHHHTTSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHcCcHhH----HHHHHHcCCChHHHHHHh
Confidence 999999999876444 356899999999877665544444443 33455555544 44443 666777777
Q ss_pred cCCCCCH
Q 010693 455 LSSRLSL 461 (503)
Q Consensus 455 l~~~~~~ 461 (503)
..++++.
T Consensus 382 ~~~~~~~ 388 (453)
T 3atr_A 382 EKGDLHL 388 (453)
T ss_dssp HHCCCCH
T ss_pred hcCCccc
Confidence 6677754
No 4
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=99.98 E-value=8.1e-31 Score=269.34 Aligned_cols=307 Identities=13% Similarity=0.074 Sum_probs=190.8
Q ss_pred CCCCCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccc---hhHhhhhcCchhhhh-hccCc--eE
Q 010693 79 HPSDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGV---WVDEFEDIGLVDCLD-KTWPM--TC 151 (503)
Q Consensus 79 ~~~~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~---~~~~l~~~~~~~~~~-~~~~~--~~ 151 (503)
+++.+..+||+||||||+||++|+.|++ +|++|+|||+.+.... ....+. ....++.+|+.+.+. ..... ..
T Consensus 17 ~~~~~~~~dV~IVGaG~aGl~~A~~La~-~G~~V~v~E~~~~~~~~~~~~~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~ 95 (407)
T 3rp8_A 17 NLYFQGHMKAIVIGAGIGGLSAAVALKQ-SGIDCDVYEAVKEIKPVGAAISVWPNGVKCMAHLGMGDIMETFGGPLRRMA 95 (407)
T ss_dssp ------CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSCC----CEEEECHHHHHHHHHTTCHHHHHHHSCCCCEEE
T ss_pred cccCCCCCEEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCCCCCcCeeEEECHHHHHHHHHCCCHHHHHhhcCCCcceE
Confidence 3355678999999999999999999999 9999999999865422 112222 334577788844332 22222 22
Q ss_pred EEecC-Ccc-ccc---------CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceE
Q 010693 152 VFIND-HKT-KYL---------DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLI 219 (503)
Q Consensus 152 ~~~~~-~~~-~~~---------~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~v 219 (503)
+.... +.. ... ......++|..+.+.|.+.+.+ ++++ +++|++++.+++++.|++.+|++++||+|
T Consensus 96 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~a~~v 173 (407)
T 3rp8_A 96 YRDFRSGENMTQFSLAPLIERTGSRPCPVSRAELQREMLDYWGR--DSVQFGKRVTRCEEDADGVTVWFTDGSSASGDLL 173 (407)
T ss_dssp EEETTTCCEEEEEECHHHHHHHSSCCEEEEHHHHHHHHHHHHCG--GGEEESCCEEEEEEETTEEEEEETTSCEEEESEE
T ss_pred EEECCCCCEeEEecchhhhhhcCCceEEEEHHHHHHHHHHhCCc--CEEEECCEEEEEEecCCcEEEEEcCCCEEeeCEE
Confidence 22222 111 011 1222248999999999999977 7888 99999999999999999999999999999
Q ss_pred EecCCCCccccccc-CCC-CCccceeEEEEEEec--CCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCC
Q 010693 220 VDASGFASSFVEYD-KPR-NHGYQIAHGILAEVE--SHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSN 295 (503)
Q Consensus 220 I~A~G~~s~vr~~~-~~~-~~~~~~~~g~~~~~~--~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~ 295 (503)
|+|||.+|.+|+.. +.. ...+.....+...++ ........... +... .+++|++|.+++
T Consensus 174 V~AdG~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~----~~~~~~~p~~~~ 236 (407)
T 3rp8_A 174 IAADGSHSALRPWVLGFTPQRRYAGYVNWNGLVEIDEALAPGDQWTT-------------FVGE----GKQVSLMPVSAG 236 (407)
T ss_dssp EECCCTTCSSHHHHHSSCCCCEEEEEEEEEEEEECCTTTCCTTEEEE-------------EEET----TEEEEEEEETTT
T ss_pred EECCCcChHHHHHhcCCCCCCcccCcEEEEEEEecccccCCCCceEE-------------EECC----CcEEEEEEcCCC
Confidence 99999999999876 432 222222222222222 11111111111 1112 268999999988
Q ss_pred eEEEecccc-cCCCCCCHHHHHHHHHHHHhhcCCccceEee-------cceecccCCCCCCCCCCCEEEeccCCCCcCCc
Q 010693 296 LVFLEETSL-VSRPVLSYKEVKRRMAARLRHMGIRVKRVIE-------DEKCLIPMGGPLPVIPQSVMAIGSTSGLVHPS 367 (503)
Q Consensus 296 ~~~v~~~~~-~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~-------~~~~~~p~~~~~~~~~~~v~liGDAa~~~~P~ 367 (503)
...+..... ......+.+...+.+.+.+......+..++. .....+|+........+||+++|||||.++|+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~LvGDAAh~~~P~ 316 (407)
T 3rp8_A 237 RFYFFFDVPLPAGLAEDRDTLRADLSRYFAGWAPPVQKLIAALDPQTTNRIEIHDIEPFSRLVRGRVALLGDAGHSTTPD 316 (407)
T ss_dssp EEEEEEEEECCTTCSCCTTTHHHHHHHHTTTCCHHHHHHHHHSCGGGCEEEEEEECCCCSCCEETTEEECGGGTCCCCGG
T ss_pred eEEEEEEeCCCcCCCCCchhHHHHHHHHhcCCChHHHHHHHcCCccceeEEeeEecCCCCceecCCEEEEEcccccCCcc
Confidence 654322211 1112233444555555555443221111110 01233444333333678999999999999999
Q ss_pred ccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 368 TGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 368 ~G~G~~~al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
+|||++.|++||..||+.|.+.. .....++.|++.++.
T Consensus 317 ~GqG~~~al~da~~La~~L~~~~---~~~~~l~~Y~~~r~~ 354 (407)
T 3rp8_A 317 IGQGGCAAMEDAVVLGAVFRQTR---DIAAALREYEAQRCD 354 (407)
T ss_dssp GSCHHHHHHHHHHHHHHHHHSCC---CHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHhcCC---CHHHHHHHHHHHHHH
Confidence 99999999999999999998431 223467788876654
No 5
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=99.97 E-value=3.4e-29 Score=263.43 Aligned_cols=303 Identities=14% Similarity=0.107 Sum_probs=199.0
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccch---hHhhhhcCchhhhhhc--cCceEEEec
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGVW---VDEFEDIGLVDCLDKT--WPMTCVFIN 155 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~~---~~~l~~~~~~~~~~~~--~~~~~~~~~ 155 (503)
+..++||+||||||+||++|+.|++ +|++|+|||+.+.... ++..+.+ .+.++.+|+.+.+... +.. ..+.
T Consensus 9 ~~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~--~~~~ 85 (499)
T 2qa2_A 9 HRSDASVIVVGAGPAGLMLAGELRL-GGVDVMVLEQLPQRTGESRGLGFTARTMEVFDQRGILPAFGPVETSTQ--GHFG 85 (499)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCSSCCCCCCSEEECHHHHHHHHHTTCGGGGCSCCEESE--EEET
T ss_pred cCCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCCCCCCCceeEECHHHHHHHHHCCCHHHHHhcccccc--ceec
Confidence 4567999999999999999999999 9999999999866432 2233332 3456778875443321 111 1111
Q ss_pred CCc--cccc--CCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCc---EEEeceEEecCCCC
Q 010693 156 DHK--TKYL--DRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGN---EIKASLIVDASGFA 226 (503)
Q Consensus 156 ~~~--~~~~--~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~---~i~a~~vI~A~G~~ 226 (503)
... .... ..++.+ +++..+.+.|.+.+.+.|++++ +++|++++.++++++|++.++. +++||+||+|||.+
T Consensus 86 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~ 165 (499)
T 2qa2_A 86 GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGR 165 (499)
T ss_dssp TEEEEGGGSTTCCCEEEEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSCEEEEEEEEEEECCCTT
T ss_pred ceecccccCCCCCCceEecCHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCcEEEEeCEEEEccCcc
Confidence 100 0011 123333 8999999999999999999999 9999999998888889888775 79999999999999
Q ss_pred cccccccCCCCCccce-eEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEeccc--
Q 010693 227 SSFVEYDKPRNHGYQI-AHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETS-- 303 (503)
Q Consensus 227 s~vr~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~-- 303 (503)
|.+|+..+....+... ..++...+..... ++...+ + +. . .++++++|.+++...+....
T Consensus 166 S~VR~~lg~~~~~~~~~~~~~~~~v~~~~~-~~~~~~--~----------~~-~----~g~~~~~P~~~g~~~~~~~~~~ 227 (499)
T 2qa2_A 166 STVRKAAGFDFPGTSASREMFLADIRGCEI-TPRPIG--E----------TV-P----LGMVMSAPLGDGVDRIIVCERG 227 (499)
T ss_dssp CHHHHHTTCCCCEECCCCCEEEEEEESCCC-CCEEEE--E----------EE-T----TEEEEEEECSSSCEEEEEEETT
T ss_pred cHHHHHcCCCCCCCCCccEEEEEEEEECCC-CcceEE--E----------EC-C----CeEEEEEEcCCCEEEEEEEecC
Confidence 9999876553332111 1223333322111 121111 0 11 1 25789999988754332211
Q ss_pred c---cCCCCCCHHHHHHHHHHHHhhcCCccceEeecceecccCCCC--CCCCCCCEEEeccCCCCcCCcccHHHHHHHHh
Q 010693 304 L---VSRPVLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGP--LPVIPQSVMAIGSTSGLVHPSTGYMVARTMAL 378 (503)
Q Consensus 304 ~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~--~~~~~~~v~liGDAa~~~~P~~G~G~~~al~~ 378 (503)
. ......+.+++.+.+.+.+... .....+.. ...++.... .....+||+++|||||.++|++|||+|.+|+|
T Consensus 228 ~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~--~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~D 304 (499)
T 2qa2_A 228 APARRRTGPPPYQEVAAAWQRLTGQD-ISHGEPVW--VSAFGDPARQVSAYRRGRVLLAGDSAHVHLPAGGQGMNVSVQD 304 (499)
T ss_dssp CCCCCCSSSCCHHHHHHHHHHHHSCC-CTTCEEEE--EEEECCCEEECSCSEETTEEECGGGTEEECCCSSCHHHHHHHH
T ss_pred CCCccccCCCCHHHHHHHHHHHhCCC-CCccceeE--EEEEeCCcEEcccccCCCEEEEecccccCCCccccchhhhHHH
Confidence 1 1113356788888777776431 11112211 122333211 12256899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 379 APALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 379 a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
|..||+.|+..+.+......|+.|++.++.
T Consensus 305 A~~La~~La~~l~g~~~~~~L~~Ye~eR~~ 334 (499)
T 2qa2_A 305 SVNLGWKLAAVVSGRAPAGLLDTYHEERHP 334 (499)
T ss_dssp HHHHHHHHHHHHTTSSCTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 999999999988755555678999887654
No 6
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=99.97 E-value=2.3e-29 Score=264.72 Aligned_cols=306 Identities=14% Similarity=0.118 Sum_probs=199.3
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccch---hHhhhhcCchhhhhhccCceEEEecC
Q 010693 81 SDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGVW---VDEFEDIGLVDCLDKTWPMTCVFIND 156 (503)
Q Consensus 81 ~~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~~---~~~l~~~~~~~~~~~~~~~~~~~~~~ 156 (503)
....++||+||||||+||++|+.|++ +|++|+||||.+.... ++..+.+ .+.++.+|+.+.+..........+..
T Consensus 7 ~~~~~~dVlIVGaGpaGl~~A~~La~-~G~~v~vlE~~~~~~~~~r~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~ 85 (500)
T 2qa1_A 7 HHRSDAAVIVVGAGPAGMMLAGELRL-AGVEVVVLERLVERTGESRGLGFTARTMEVFDQRGILPRFGEVETSTQGHFGG 85 (500)
T ss_dssp -CCSBCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCCC-CCCCCSEEECHHHHHHHHTTTCGGGGCSCCBCCEEEETT
T ss_pred CccCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCCCCCCCCcceECHHHHHHHHHCCCHHHHHhccccccccccc
Confidence 45678999999999999999999999 9999999999866432 2333332 34567788754433211111111111
Q ss_pred Cc--ccccC--CCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCc---EEEeceEEecCCCCc
Q 010693 157 HK--TKYLD--RPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGN---EIKASLIVDASGFAS 227 (503)
Q Consensus 157 ~~--~~~~~--~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~---~i~a~~vI~A~G~~s 227 (503)
.. ..... .++.+ +++..+.+.|.+.+.+.|++++ +++|++++.++++++|++.++. +++||+||+|||.+|
T Consensus 86 ~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~~~~~a~~vVgADG~~S 165 (500)
T 2qa1_A 86 LPIDFGVLEGAWQAAKTVPQSVTETHLEQWATGLGADIRRGHEVLSLTDDGAGVTVEVRGPEGKHTLRAAYLVGCDGGRS 165 (500)
T ss_dssp EEEEGGGSTTGGGCEEEEEHHHHHHHHHHHHHHTTCEEEETCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECCCTTC
T ss_pred eecccccCCCCCCceeecCHHHHHHHHHHHHHHCCCEEECCcEEEEEEEcCCeEEEEEEcCCCCEEEEeCEEEECCCcch
Confidence 00 00111 22333 8899999999999999999999 9999999999999998887765 799999999999999
Q ss_pred ccccccCCCCCccce-eEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEeccccc-
Q 010693 228 SFVEYDKPRNHGYQI-AHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLV- 305 (503)
Q Consensus 228 ~vr~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~- 305 (503)
.+|+..+....+... ..++...+..... ++...+ + +. . .++++++|.+++...+......
T Consensus 166 ~VR~~lg~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~----------~~-~----~g~~~~~p~~~g~~~~~~~~~~~ 227 (500)
T 2qa1_A 166 SVRKAAGFDFPGTAATMEMYLADIKGVEL-QPRMIG--E----------TL-P----GGMVMVGPLPGGITRIIVCERGT 227 (500)
T ss_dssp HHHHHTTCCCCEECCCCEEEEEEEESCCC-CCEEEE--E----------EE-T----TEEEEEEEETTTEEEEEEEETTC
T ss_pred HHHHHcCCCcCCCccceEEEEEEEEeCCC-CCceEE--E----------EC-C----CcEEEEEEcCCCEEEEEEEcCCC
Confidence 999876654332111 1233333332211 121111 0 11 1 2578999998885443221100
Q ss_pred ----CCCCCCHHHHHHHHHHHHhhcCCccceEeecceecccCCCC--CCCCCCCEEEeccCCCCcCCcccHHHHHHHHhH
Q 010693 306 ----SRPVLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGP--LPVIPQSVMAIGSTSGLVHPSTGYMVARTMALA 379 (503)
Q Consensus 306 ----~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~--~~~~~~~v~liGDAa~~~~P~~G~G~~~al~~a 379 (503)
.....+.+++.+.+.+.+... +....+.. ...++.... .....+||+++|||||.++|++|||+|.+|+||
T Consensus 228 ~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~--~~~~~~~~~~a~~~~~grv~L~GDAAH~~~P~~GqG~n~gi~DA 304 (500)
T 2qa1_A 228 PPQRRETPPSWHEVADAWKRLTGDD-IAHAEPVW--VSAFGNATRQVTEYRRGRVILAGDSAHIHLPAGGQGMNTSIQDA 304 (500)
T ss_dssp CC-----CCCHHHHHHHHHHHHSCC-CTTSEEEE--EEEEECCEEECSCSEETTEEECGGGTEECCCCSSCHHHHHHHHH
T ss_pred CCccccCCCCHHHHHHHHHHhcCCC-CCccceeE--EEEeccCcEEccccccCCEEEEEccccCCCCccccchhhhHHHH
Confidence 113356778887777766431 11112211 112333211 122568999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 380 PALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 380 ~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
..||+.|+..+.+......|+.|++.++.
T Consensus 305 ~~La~~La~~~~g~~~~~~L~~Y~~eR~~ 333 (500)
T 2qa1_A 305 VNLGWKLGAVVNGTATEELLDSYHSERHA 333 (500)
T ss_dssp HHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCCChHHHHHHHHHHHH
Confidence 99999999988755445678899887654
No 7
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=99.96 E-value=6.9e-28 Score=248.35 Aligned_cols=295 Identities=17% Similarity=0.195 Sum_probs=180.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCccc---chhHhhhhcCchhhhhh-ccC---ceEEEe--
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYG---VWVDEFEDIGLVDCLDK-TWP---MTCVFI-- 154 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g---~~~~~l~~~~~~~~~~~-~~~---~~~~~~-- 154 (503)
.++||+||||||+|+++|+.|++ +|++|+|||+.+........+ .....++.+++.+.+.. .+. +..+..
T Consensus 4 ~~~dVvIIGgG~aGl~~A~~La~-~G~~V~v~E~~~~~~~~~g~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~ 82 (421)
T 3nix_A 4 EKVDVLVIGAGPAGTVAASLVNK-SGFKVKIVEKQKFPRFVIGESLLPRCMEHLDEAGFLDAVKAQGFQQKFGAKFVRGK 82 (421)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSCSSCCCSCCBCCGGGHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCCCCCcccCcccHhHHHHHHHcCChHHHHHcCCcccCCcEEEeCC
Confidence 35999999999999999999999 999999999986443222211 23344667776443322 111 111111
Q ss_pred -----cCCcccccCCCcc-ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE--EEEeCCCc--EEEeceEEecC
Q 010693 155 -----NDHKTKYLDRPYG-RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES--SIVCDDGN--EIKASLIVDAS 223 (503)
Q Consensus 155 -----~~~~~~~~~~~~~-~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~--~v~~~~g~--~i~a~~vI~A~ 223 (503)
+..........++ .++|..+.+.|.+.+.+.|++++ +++|++++.+++++ .+.+.+|+ +++||+||+|+
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A~ 162 (421)
T 3nix_A 83 EIADFNFSDQFSNGWNWTWQVPRGNFDKTLADEAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDAS 162 (421)
T ss_dssp EEEEEETTSCSSCSCCCEEECCHHHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEECC
T ss_pred eeEEEeehhhcCCCCCceeEECHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEECC
Confidence 1110001112233 38999999999999999999999 99999999887754 45557787 79999999999
Q ss_pred CCCcccccccCCCCCc-cceeEEEEEEecC----CCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEE
Q 010693 224 GFASSFVEYDKPRNHG-YQIAHGILAEVES----HPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVF 298 (503)
Q Consensus 224 G~~s~vr~~~~~~~~~-~~~~~g~~~~~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~ 298 (503)
|.+|.+++..+..... ......+...+.. +.++.+...+. +. ...+ .+|+|++|.+++.+.
T Consensus 163 G~~s~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~~---~g~~~~~P~~~~~~~ 228 (421)
T 3nix_A 163 GYGRVIPRMFGLDKPSGFESRRTLFTHIKDVKRPVAAEMEGNRIT-AV----------VHKP---KVWIWVIPFSNGNTS 228 (421)
T ss_dssp GGGCHHHHHTTCEECCSSCCCEEEEEEEECTTCCC----CCSEEE-EE----------EEET---TEEEEEEECTTSEEE
T ss_pred CCchhhHHhcCCCCCCcCCCcEEEEEEECCCcCCCccCCCCeEEE-EE----------eCCC---CEEEEEEEECCCCEE
Confidence 9999888765442221 1111222222221 12222222221 10 0112 479999999998766
Q ss_pred Eeccc---ccCCCCCCHHHHHHHHHHHHhhcCCccceEe-ecceecccCC-CC-CCCCCCCEEEeccCCCCcCCcccHHH
Q 010693 299 LEETS---LVSRPVLSYKEVKRRMAARLRHMGIRVKRVI-EDEKCLIPMG-GP-LPVIPQSVMAIGSTSGLVHPSTGYMV 372 (503)
Q Consensus 299 v~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~-~~~~~~~p~~-~~-~~~~~~~v~liGDAa~~~~P~~G~G~ 372 (503)
++... .......+.++..+.+.+..+.......... ......++.. .. .+...++++++|||||+++|++|+|+
T Consensus 229 vg~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~lvGDAa~~~~P~~G~G~ 308 (421)
T 3nix_A 229 VGFVGEPSYFDEYTGTPEERMRAMIANEGHIAERFKSEEFLFEPRTIEGYAISASKLYGDGFVLTGNATEFLDPIFSSGA 308 (421)
T ss_dssp EEEEECHHHHTTSCSCHHHHHHHHHHTCTTTHHHHTTCCBSSCCEEEECCCBEESCSEETTEEECGGGTCBCCSTTCCHH
T ss_pred EEEEecHHHhhhcCCCHHHHHHHHHHhCcHHHHHHhcCccccCceeecccceeeeeeccCCEEEecccccccCCcccccH
Confidence 54332 1111223455555554443332110011000 0111222221 11 12356899999999999999999999
Q ss_pred HHHHHhHHHHHHHHHHHhcCC
Q 010693 373 ARTMALAPALADAIAECLGST 393 (503)
Q Consensus 373 ~~al~~a~~lA~~l~~~l~~~ 393 (503)
+.|+++|..||+.|.+++.++
T Consensus 309 ~~A~~~a~~la~~l~~~~~~~ 329 (421)
T 3nix_A 309 TFAMESGSKGGKLAVQFLKGE 329 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhcCC
Confidence 999999999999999998754
No 8
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=99.96 E-value=3.8e-28 Score=258.22 Aligned_cols=306 Identities=14% Similarity=0.047 Sum_probs=195.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccc---hhHhhhhcCchhhhhh-ccC--c---e---
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGV---WVDEFEDIGLVDCLDK-TWP--M---T--- 150 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~---~~~~l~~~~~~~~~~~-~~~--~---~--- 150 (503)
.++||+||||||+||++|+.|++ +|++|+||||.+.... ++..+. ....++.+|+.+.+.. ... . .
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~-~G~~v~viEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~~ 82 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLAR-QGVRVLVVERRPGLSPYPRAAGQNPRTMELLRIGGVADEVVRADDIRGTQGDFVIR 82 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSSSCCCCCCSCCBCHHHHHHHHHTTCHHHHHHSCCSSCTTSCCEEE
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCCCCCCCccceECHHHHHHHHHcCCHHHHHhhCCCcccccceeee
Confidence 46999999999999999999999 9999999999875432 222232 2345677777443322 111 0 0
Q ss_pred EEEecCCcc---------------cc-cCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC----EEEEEeC
Q 010693 151 CVFINDHKT---------------KY-LDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF----ESSIVCD 209 (503)
Q Consensus 151 ~~~~~~~~~---------------~~-~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~----~~~v~~~ 209 (503)
......+.. .. ...+...+++..+...|.+.+.+.|++++ +++|++++.+++ ++.+++.
T Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~i~~~~~~~~~~v~v~~~ 162 (535)
T 3ihg_A 83 LAESVRGEILRTVSESFDDMVAATEPCTPAGWAMLSQDKLEPILLAQARKHGGAIRFGTRLLSFRQHDDDAGAGVTARLA 162 (535)
T ss_dssp EESSSSSCEEEEEESCHHHHHHTTGGGCSCCCBCCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEECGGGCSEEEEEEE
T ss_pred EEeccCCceeeeccccccccccccccCCCCcccccCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEECCCCccccEEEEEE
Confidence 000000000 00 11223348999999999999999999999 999999999988 8988887
Q ss_pred CC---cEEEeceEEecCCCCcccccccCCCCCccc---eeEEEEEEecCCCCCCCc-eEEeeccCCCCCCCcccccCCCC
Q 010693 210 DG---NEIKASLIVDASGFASSFVEYDKPRNHGYQ---IAHGILAEVESHPFDLDK-MVLMDWRDSHLGNEPYLRASNLK 282 (503)
Q Consensus 210 ~g---~~i~a~~vI~A~G~~s~vr~~~~~~~~~~~---~~~g~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~g~~ 282 (503)
++ .+++||+||+|||.+|.+|+..+....+.. ....+....+.+....+. ..++ +. +.++
T Consensus 163 ~~~~~~~i~a~~vV~AdG~~S~vR~~lgi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---------~~p~--- 229 (535)
T 3ihg_A 163 GPDGEYDLRAGYLVGADGNRSLVRESLGIGRYGHGTLTHMVGVIFDADLSGIMEPGTTGWY-YL---------HHPE--- 229 (535)
T ss_dssp ETTEEEEEEEEEEEECCCTTCHHHHHTTCCEEEEEEEEEEEEEEEECCGGGTSCTTCCEEE-EE---------ECSS---
T ss_pred cCCCeEEEEeCEEEECCCCcchHHHHcCCCcCCCCccceEEEEEEeccChhhccCCceEEE-EE---------ECCC---
Confidence 76 689999999999999999987755433222 222232222111111111 0110 00 0112
Q ss_pred CCeEEEEeecCCCeEE-Eeccccc----CCCCCCHHHHHHHHHHHHhhcCCccceEeecceecccCCCC--CCCCCCCEE
Q 010693 283 LPTFLYAMPFDSNLVF-LEETSLV----SRPVLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGP--LPVIPQSVM 355 (503)
Q Consensus 283 ~~~~~~~~P~~~~~~~-v~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~--~~~~~~~v~ 355 (503)
...+++|..++..| +...... .....+.+.+.+.+.+.+....... ++.. ...+++... .....+||+
T Consensus 230 --~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~l~~~~~~~~~~~-~~~~--~~~~~~~~~~a~~~~~grv~ 304 (535)
T 3ihg_A 230 --FKGTFGPTDRPDRHTLFVEYDPDEGERPEDFTPQRCVELIGLALDAPEVKP-ELVD--IQGWEMAARIAERWREGRVF 304 (535)
T ss_dssp --CEEEEEECSSTTEEEEEEEECTTTTCCGGGCCHHHHHHHHHHHHTCSSCCC-EEEE--EEEEEEEEEEESCSEETTEE
T ss_pred --ceEEEEEecCCCEEEEEEeeCccccCccccCCHHHHHHHHHHHhCCCCCce-eEEE--eeEeeeeEEEECccccCCEE
Confidence 24666777753222 2211111 1123466777777777665322221 2222 122232211 122568999
Q ss_pred EeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 356 AIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 356 liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
++|||||.++|++|||+|+|++||..||+.|+..+++......|+.|++.++.
T Consensus 305 LvGDAAH~~~P~~GqG~n~ai~DA~~La~~La~~l~g~~~~~lL~~Ye~eR~p 357 (535)
T 3ihg_A 305 LAGDAAKVTPPTGGMSGNAAVADGFDLAWKLAAVLQGQAGAGLLDTYEDERKV 357 (535)
T ss_dssp ECTTTTEECCSTTSCHHHHHHHHHHHHHHHHHHHHTTSSCTTHHHHHHHHHHH
T ss_pred EEecccccCCCccCCccccccccHHHHHHHHHHHhcCCCcHHHHHhhHHHHHH
Confidence 99999999999999999999999999999999998766666779999987664
No 9
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=99.96 E-value=1.6e-28 Score=261.73 Aligned_cols=303 Identities=14% Similarity=0.108 Sum_probs=189.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccc---hhHhhhhcCchhhhhh-ccCceEEEecCCc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGV---WVDEFEDIGLVDCLDK-TWPMTCVFINDHK 158 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~---~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~ 158 (503)
.++||+||||||+||++|+.|++ +|++|+|||+.+.... .+..+. ....++.+|+.+.+.. ........+....
T Consensus 48 ~~~DVvIVGaG~aGL~~A~~La~-~G~~V~VlEr~~~~~~~~r~~~l~~~s~~~l~~lGl~~~l~~~~~~~~~~~~~~~~ 126 (570)
T 3fmw_A 48 LTTDVVVVGGGPVGLMLAGELRA-GGVGALVLEKLVEPVGHDRAGALHIRTVETLDLRGLLDRFLEGTQVAKGLPFAGIF 126 (570)
T ss_dssp ---CEEEECCSHHHHHHHHHHHH-TTCCEEEEBSCSSCCCSSSCCCBCHHHHHHHHTTTCHHHHTTSCCBCSBCCBTTBC
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEcCCCCCCCCceEEEECHHHHHHHHHcCChHHHHhcCcccCCceeCCcc
Confidence 46999999999999999999999 9999999999866432 222222 2345677787543322 1111100011110
Q ss_pred --c---cc--cCCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe--CCC-cEEEeceEEecCCCC
Q 010693 159 --T---KY--LDRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC--DDG-NEIKASLIVDASGFA 226 (503)
Q Consensus 159 --~---~~--~~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~--~~g-~~i~a~~vI~A~G~~ 226 (503)
. .. ...++.+ +++..+.+.|.+.+.+.|++++ +++|++++.+++++.|++ .+| ++++||+||+|||.+
T Consensus 127 ~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~~~~~a~~vV~ADG~~ 206 (570)
T 3fmw_A 127 TQGLDFGLVDTRHPYTGLVPQSRTEALLAEHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGPYPVRARYGVGCDGGR 206 (570)
T ss_dssp TTCCBGGGSCCSCCSBBCCCHHHHHHHHHHHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEEEEEEESEEEECSCSS
T ss_pred cccccccccCCCCCeeEEeCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCcEEEEeCEEEEcCCCC
Confidence 0 01 1223444 8999999999999998899999 999999999888888887 677 689999999999999
Q ss_pred cccccccCCCCCccce-eEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEE-eecCCCeE--E--Ee
Q 010693 227 SSFVEYDKPRNHGYQI-AHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYA-MPFDSNLV--F--LE 300 (503)
Q Consensus 227 s~vr~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~-~P~~~~~~--~--v~ 300 (503)
|.+|+..+.......+ ..++...+.... .. .. ..+ .+.+. +++++ +|.+++.. + ..
T Consensus 207 S~vR~~lGi~~~~~~~~~~~~~~~v~~~~-~~--~~-~~~---------~~~~~-----G~~~~~~P~~~g~~~~i~~~~ 268 (570)
T 3fmw_A 207 STVRRLAADRFPGTEATVRALIGYVTTPE-RE--VP-RRW---------ERTPD-----GILVLAFPPEGGLGPGWSSSS 268 (570)
T ss_dssp CHHHHHTTCCCCCCCCCEEEEEEECCCCS-CS--SC-CCC---------CCCCS-----SCEEECCCC------CEEEEE
T ss_pred chHHHHcCCCCccceeeeEEEEEEEEecC-CC--cc-eEE---------EecCC-----EEEEEEeecCCCeEEEEEEEe
Confidence 9999877654332222 233333333211 11 00 011 01122 45666 78887643 1 12
Q ss_pred cccc--cCCCCCCHHHHHHHHHHHHhhcCCccceEeec-ceecccCCCCC--CCCCCCEEEeccCCCCcCCcccHHHHHH
Q 010693 301 ETSL--VSRPVLSYKEVKRRMAARLRHMGIRVKRVIED-EKCLIPMGGPL--PVIPQSVMAIGSTSGLVHPSTGYMVART 375 (503)
Q Consensus 301 ~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~-~~~~~p~~~~~--~~~~~~v~liGDAa~~~~P~~G~G~~~a 375 (503)
.... ......+.+++.+.+.+.+.. ........ ....+|+.... ....+||+++|||||.++|++|||+|.+
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~a~~~~~grv~LvGDAAH~~~P~~GqG~n~g 345 (570)
T 3fmw_A 269 TGHSPAADEGPVTLEDLGAAVARVRGT---PLTLTEPVSWLSRFGDASRQAKRYRSGRVLLAGDAAHVHFPIGGQGLNTG 345 (570)
T ss_dssp ESCC-----CCCCHHHHHHHTTSSSSC---CCCCCSCCEEEEEECCCCEECSCSEETTEEECGGGTEECCCCSSCHHHHH
T ss_pred CCCCccccccCCCHHHHHHHHHHHhhc---ccccceeeeeeEEeecccccccccccCCEEEEEecceecCCCcCcCHhHH
Confidence 1111 111344566666655544332 11111111 22344543322 2357899999999999999999999999
Q ss_pred HHhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 376 MALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 376 l~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
++||..||+.|+..+.+......|+.|++.++.
T Consensus 346 l~DA~~La~~La~~~~g~~~~~lL~~Ye~eR~~ 378 (570)
T 3fmw_A 346 LQDAVNLGWKLAARVRGWGSEELLDTYHDERHP 378 (570)
T ss_dssp HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 999999999999988655555678899887664
No 10
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=99.96 E-value=3.7e-28 Score=256.79 Aligned_cols=323 Identities=17% Similarity=0.170 Sum_probs=194.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchh----HhhhhcCchhhhhh-ccCc---eEEEe
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWV----DEFEDIGLVDCLDK-TWPM---TCVFI 154 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~----~~l~~~~~~~~~~~-~~~~---~~~~~ 154 (503)
+.++||+||||||+|+++|+.|++ +|++|+|||+.+........+.+. ..++.+++.+.+.. .... ..+..
T Consensus 5 ~~~~dVvIVGgG~aGl~aA~~La~-~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lgl~~~~~~~~~~~~~~~~~~~ 83 (512)
T 3e1t_A 5 PEVFDLIVIGGGPGGSTLASFVAM-RGHRVLLLEREAFPRHQIGESLLPATVHGICAMLGLTDEMKRAGFPIKRGGTFRW 83 (512)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSSCSSCCCSCCBCCHHHHTTHHHHTTCHHHHHTTTCCEECEEEEEC
T ss_pred CccCCEEEECcCHHHHHHHHHHHh-CCCCEEEEccCCCCCCCCCcccCcchHHHHHHHhCcHHHHHHcCCccccCceEEe
Confidence 346999999999999999999999 999999999986433222222211 23556777443322 1111 11111
Q ss_pred cCCc---------ccccCCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE---EEEEeCCCc--EEEece
Q 010693 155 NDHK---------TKYLDRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE---SSIVCDDGN--EIKASL 218 (503)
Q Consensus 155 ~~~~---------~~~~~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~---~~v~~~~g~--~i~a~~ 218 (503)
.... .......+++ +++..+.+.|.+.+.+.|++++ +++|+++..+++. +.+...+|+ +++||+
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~ 163 (512)
T 3e1t_A 84 GKEPEPWTFGFTRHPDDPYGFAYQVERARFDDMLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARF 163 (512)
T ss_dssp SSCSSCEEEESSSSSSSTTCCEEBCCHHHHHHHHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEE
T ss_pred cCCccccccccccCCCCCcceeeEecHHHHHHHHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCE
Confidence 1110 0011123334 8999999999999999999999 9999999998875 444556674 799999
Q ss_pred EEecCCCCcccccccCCCCC-ccceeEEEEEEecC---CCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCC
Q 010693 219 IVDASGFASSFVEYDKPRNH-GYQIAHGILAEVES---HPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDS 294 (503)
Q Consensus 219 vI~A~G~~s~vr~~~~~~~~-~~~~~~g~~~~~~~---~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~ 294 (503)
||+|+|.+|.+++..+.... .+....++...+.. .+.......+. .... .+|+|++|..+
T Consensus 164 VI~AdG~~S~vr~~lg~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~------------~~~~----~G~~~~~Pl~~ 227 (512)
T 3e1t_A 164 IVDASGNRTRVSQAVGERVYSRFFQNVALYGYFENGKRLPAPRQGNILS------------AAFQ----DGWFWYIPLSD 227 (512)
T ss_dssp EEECCCTTCSSGGGTCCEEECSTTCEEEEEEEEESCCCCSTTCTTSEEE------------EEET----TEEEEEEECSS
T ss_pred EEECCCcchHHHHHcCCCccCchhcceEEEEEecCCccCCCCCcCceEE------------EEeC----CceEEEEEeCC
Confidence 99999999999987643211 11112233222221 01111111110 1112 36899999999
Q ss_pred CeEEEecc---cccCCCCCCHHHHHHHHHHHHhhcCC---ccceEeecceecccCCCC----C-CCCCCCEEEeccCCCC
Q 010693 295 NLVFLEET---SLVSRPVLSYKEVKRRMAARLRHMGI---RVKRVIEDEKCLIPMGGP----L-PVIPQSVMAIGSTSGL 363 (503)
Q Consensus 295 ~~~~v~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~---~~~~i~~~~~~~~p~~~~----~-~~~~~~v~liGDAa~~ 363 (503)
+.+.+... ..........++..+.+.+..+.... ....+.....+.+++... . ..+.+|++++|||||.
T Consensus 228 ~~~~vg~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~vvlvGDAAh~ 307 (512)
T 3e1t_A 228 TLTSVGAVVSREAAEAIKDGHEAALLRYIDRCPIIKEYLAPATRVTTGDYGEIRIRKDYSYCNTSFWKNGMALVGDAACF 307 (512)
T ss_dssp SEEEEEEEEEHHHHTTTSSCHHHHHHHHHHTSHHHHHHHTTCEECCSSTTSSCEEEESCCEEESCSBCSSEEECGGGTEE
T ss_pred CeEEEEEEecHHHhhhhcCCHHHHHHHHHHhCchHHHHHhcCccccccccccceeeccccccccccccCCEEEEechhhc
Confidence 86543322 11111122344444433333222100 001111111122222211 1 2257899999999999
Q ss_pred cCCcccHHHHHHHHhHHHHHHHHHHHhcCCCC-CCCchhhHHHHhhcCcHHHHHHHHHHH
Q 010693 364 VHPSTGYMVARTMALAPALADAIAECLGSTRM-IRGRPLHQKVWNGLWPIDRRCNREFYS 422 (503)
Q Consensus 364 ~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~-~~~l~~y~~~~~~~~~~~~~~~~~~~~ 422 (503)
++|++|||++.|+++|..||+.|...+.+..+ ...++.|++.++..|...+.....+++
T Consensus 308 ~~P~~GqG~~~Al~dA~~La~~L~~~l~~~~~~~~aL~~Ye~~~~~~~~~~~~~~~~~y~ 367 (512)
T 3e1t_A 308 VDPVFSSGVHLATYSALLVARAINTCLAGEMSEQRCFEEFERRYRREYGNFYQFLVAFYD 367 (512)
T ss_dssp CCSTTCCHHHHHHHHHHHHHHHHHHHTTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCccccCHHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998865432 235788998888766554444444443
No 11
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=99.96 E-value=4.4e-28 Score=258.93 Aligned_cols=323 Identities=14% Similarity=0.129 Sum_probs=195.0
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccc---hhHhhhhcCchhhhhh-ccC---ceEEE
Q 010693 81 SDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGV---WVDEFEDIGLVDCLDK-TWP---MTCVF 153 (503)
Q Consensus 81 ~~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~---~~~~l~~~~~~~~~~~-~~~---~~~~~ 153 (503)
..|..+||+||||||||+++|+.|++ .|++|+|||+.+........+. ....++.+|+.+.+.. .+. ...+.
T Consensus 19 ~~M~~~DVvIVGgG~AGl~aA~~Lar-~G~~V~LiEr~~~~~~~~G~~l~p~~~~~l~~lGl~~~l~~~~~~~~~~~~~~ 97 (591)
T 3i3l_A 19 SHMTRSKVAIIGGGPAGSVAGLTLHK-LGHDVTIYERSAFPRYRVGESLLPGTMSILNRLGLQEKIDAQNYVKKPSATFL 97 (591)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCSSCCCCCCBCCHHHHHHHHHTTCHHHHHHHCCEEECEEEEE
T ss_pred CcCCCCCEEEECcCHHHHHHHHHHHc-CCCCEEEEcCCCCCCCceeeeECHHHHHHHHHcCCcHHHHhcCCcccCCcEEE
Confidence 34557999999999999999999999 9999999999865433222222 2334667777443322 111 11111
Q ss_pred ecC-----------CcccccCCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe-CCEEEEEeC-CC--cEEEe
Q 010693 154 IND-----------HKTKYLDRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ-EFESSIVCD-DG--NEIKA 216 (503)
Q Consensus 154 ~~~-----------~~~~~~~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~~v~~~-~g--~~i~a 216 (503)
... ........++++ +++..+.+.|.+.+.+.|++++ +++|+++..+ ++.+.|.+. +| .+++|
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~V~~v~~~~g~~~~V~~~~~G~~~~i~A 177 (591)
T 3i3l_A 98 WGQDQAPWTFSFAAPKVAPWVFDHAVQVKREEFDKLLLDEARSRGITVHEETPVTDVDLSDPDRVVLTVRRGGESVTVES 177 (591)
T ss_dssp CSSSCCCEEEECCCC--CTTCCSCEEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEECCSTTCEEEEEEETTEEEEEEE
T ss_pred ecCCCccceeecccccccccccCeeEEEcHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEEecCCceEEEEc
Confidence 111 100011223343 8999999999999999999999 9999999876 556777776 66 47999
Q ss_pred ceEEecCCCCcccccccCCCCCc-cceeEEEEEEecCC---CCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeec
Q 010693 217 SLIVDASGFASSFVEYDKPRNHG-YQIAHGILAEVESH---PFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPF 292 (503)
Q Consensus 217 ~~vI~A~G~~s~vr~~~~~~~~~-~~~~~g~~~~~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~ 292 (503)
|+||+|+|.+|.+++..+..... ......+...+... +.+.....+.. +. . .+|+|++|.
T Consensus 178 dlVV~AdG~~S~lr~~lg~~~~~~~~~~~av~~~~~~~~~~~~~~~~~~~~~-----------~~-~----~G~~w~iPl 241 (591)
T 3i3l_A 178 DFVIDAGGSGGPISRKLGVRQYDEFYRNFAVWSYFKLKDPFEGDLKGTTYSI-----------TF-E----DGWVWMIPI 241 (591)
T ss_dssp SEEEECCGGGCHHHHHHTCEEEEEEEEEEEEEEEEECCCSCCSTTTTCEEEE-----------EE-T----TEEEEEEEC
T ss_pred CEEEECCCCcchhHHHcCCCCCCccccceEEEEEEecCccccCCCCCceEEE-----------Ec-C----CcEEEEEEC
Confidence 99999999999988765432211 01111222222211 11111111111 11 1 378999999
Q ss_pred CCCeEEEecccccCC----CCCCHHHHHHHHHHHHhhcCCcc--ceEeecceeccc-CCC-CCCCCCCCEEEeccCCCCc
Q 010693 293 DSNLVFLEETSLVSR----PVLSYKEVKRRMAARLRHMGIRV--KRVIEDEKCLIP-MGG-PLPVIPQSVMAIGSTSGLV 364 (503)
Q Consensus 293 ~~~~~~v~~~~~~~~----~~~~~~~~~~~l~~~l~~~~~~~--~~i~~~~~~~~p-~~~-~~~~~~~~v~liGDAa~~~ 364 (503)
.++.+.+........ ...+.+++.+.+.+..+.+...+ ..... ....++ +.. ......+|++++|||||.+
T Consensus 242 ~~~~~sv~~~~~~~~~~~l~~~~~~~~~~~l~~~~p~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~rvvLIGDAAh~~ 320 (591)
T 3i3l_A 242 KDDLYSVGLVVDRSKSAEVREQGADAFYSSTLAKCAKAMDILGGAEQVD-EVRIVQDWSYDTEVFSADRFFLCGDAACFT 320 (591)
T ss_dssp SSSEEEEEEEEEGGGHHHHHHHCHHHHHHHHHTTCHHHHHHHTTCEECS-CCEEEEEEEEEESCSEETTEEECGGGTCBC
T ss_pred CCCeEEEEEEcCHHHHhhhccCCHHHHHHHHHHhCHHHHHHHhcCcccc-CceEecccccchhhcccCCEEEEccccccC
Confidence 988765443221111 01123333333333222210000 00000 011111 111 1123578999999999999
Q ss_pred CCcccHHHHHHHHhHHHHHHHHHHHhcCCCC-CCCchhhHHHHhhcCcHHHHHHHHHH
Q 010693 365 HPSTGYMVARTMALAPALADAIAECLGSTRM-IRGRPLHQKVWNGLWPIDRRCNREFY 421 (503)
Q Consensus 365 ~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~-~~~l~~y~~~~~~~~~~~~~~~~~~~ 421 (503)
+|++|+|++.|+++|..||++|...+.++.. ...++.|++.|+..|..-+.....+|
T Consensus 321 ~Pl~GqGinlAl~dA~~LA~~L~~~l~~~~~~~~al~~Y~~~~~~~~~~i~~~~~~~Y 378 (591)
T 3i3l_A 321 DPLFSQGVHLASQSAVSAAAAIDRITRHGDEKDAVHAWYNRTYREAYEQYHQFLASFY 378 (591)
T ss_dssp CGGGCCHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccccHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998865432 23577899888877665555455554
No 12
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=99.96 E-value=6.7e-27 Score=253.66 Aligned_cols=307 Identities=15% Similarity=0.169 Sum_probs=193.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHcc----CCCcEEEEcCCCCCCC-CCcccc---hhHhhhhcCchhhh-hhccCc--eEEE
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSR----HSVKVCCVDPSPLSTW-PNNYGV---WVDEFEDIGLVDCL-DKTWPM--TCVF 153 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~----~G~~V~viE~~~~~~~-~~~~g~---~~~~l~~~~~~~~~-~~~~~~--~~~~ 153 (503)
.+||+||||||+||++|+.|++. .|++|+|||+.+.... .+..+. ..+.|+.+|+.+.+ ...... ..++
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi~v~viE~~~~~~~~gra~~l~~~tle~l~~lGl~~~l~~~~~~~~~~~~~ 87 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRSTKVYNGQADGLQCRTLESLKNLGLADKILSEANDMSTIALY 87 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSSCCCSCSCCEECHHHHHHHHTTTCHHHHHTTCBCCCEEEEE
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCCCEEEEeCCCCCCCCCceeEEChHHHHHHHHCCCHHHHHHhccccceEEEE
Confidence 58999999999999999999972 5999999998865432 233333 33457888885443 222222 2222
Q ss_pred ecCCc-cc-----------ccC-CCccccCHHHHHHHHHHHHHhCC---cEEE-EeEEEEEEEeC--------CEEEEEe
Q 010693 154 INDHK-TK-----------YLD-RPYGRVSRNILKTKLLENCVSNG---VKFH-KAKVWHVNHQE--------FESSIVC 208 (503)
Q Consensus 154 ~~~~~-~~-----------~~~-~~~~~v~r~~l~~~L~~~~~~~g---v~~~-~~~v~~i~~~~--------~~~~v~~ 208 (503)
..+.. .. ... .+...+++..+++.|.+.+.+.| ++++ +++|++++.++ ..++|++
T Consensus 88 ~~~~~g~i~~~~~~~~~~~~~~~~~~~~l~q~~le~~L~~~~~~~g~~~v~v~~g~~v~~~~~d~~~~~~~~~~~V~v~~ 167 (665)
T 1pn0_A 88 NPDENGHIRRTDRIPDTLPGISRYHQVVLHQGRIERRILDSIAEISDTRIKVERPLIPEKMEIDSSKAEDPEAYPVTMTL 167 (665)
T ss_dssp EECTTSCEEEEEEEESSCTTSCSSCCEECCHHHHHHHHHHHHHHHHTTSSCEECSEEEEEEEECGGGTTCTTCCCEEEEE
T ss_pred eCCCCcceEeecccCcccCCCCCCeeEEeeHHHHHHHHHHHHHhcCCCceEEEeCCEEEEEEecCcccccCCCCCEEEEE
Confidence 11110 00 001 11223899999999999998876 8999 99999998875 3566655
Q ss_pred C------------------------------------------CC--cEEEeceEEecCCCCcccccccCCCCCccc--e
Q 010693 209 D------------------------------------------DG--NEIKASLIVDASGFASSFVEYDKPRNHGYQ--I 242 (503)
Q Consensus 209 ~------------------------------------------~g--~~i~a~~vI~A~G~~s~vr~~~~~~~~~~~--~ 242 (503)
. +| ++++||+||+|||.+|.+|+..+....+.. .
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~~~~~~~~~~G~~~~i~A~~VVGADG~~S~VR~~lg~~~~g~~~~~ 247 (665)
T 1pn0_A 168 RYMSEDESTPLQFGHKTENGLFRSNLQTQEEEDANYRLPEGKEAGEIETVHCKYVIGCDGGHSWVRRTLGFEMIGEQTDY 247 (665)
T ss_dssp EECCGGGSCCCTTCCCCCSSSCCCHHHHHHHHHTSCCCSTTCCTTCEEEEEEEEEEECCCTTCHHHHHHTCCCEEEEEEE
T ss_pred EecccccccccccccccccccccccccccccccccccccccCCCCceEEEEeCEEEeccCCCCHHHHhcCCCCCCCCccE
Confidence 3 45 479999999999999999997765433222 2
Q ss_pred eEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEE--Eeccccc------CCCCCCHHH
Q 010693 243 AHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVF--LEETSLV------SRPVLSYKE 314 (503)
Q Consensus 243 ~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~--v~~~~~~------~~~~~~~~~ 314 (503)
.+++........++....... +.... .++++++|..++.+. +...... .....+.++
T Consensus 248 ~~~v~d~~~~~~~p~~~~~~~------------~~~~~---~g~~~~~P~~~~~~r~~~~~~~~~~~~~~~~~~~~t~e~ 312 (665)
T 1pn0_A 248 IWGVLDAVPASNFPDIRSRCA------------IHSAE---SGSIMIIPRENNLVRFYVQLQARAEKGGRVDRTKFTPEV 312 (665)
T ss_dssp EEEEEEEEEECCCTTTTSEEE------------EECSS---SCEEEEEECSTTCEEEEEEECC----------CCCCHHH
T ss_pred EEEEEEEEECCCCCCcceEEE------------EEeCC---CceEEEEEcCCCEEEEEEEeCCccccccccCcCCCCHHH
Confidence 223221111111211111110 01011 256888999887433 2211111 123456778
Q ss_pred HHHHHHHHHhhcCCccceEeecceecccCCCC-CC-CC-CCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhc
Q 010693 315 VKRRMAARLRHMGIRVKRVIEDEKCLIPMGGP-LP-VI-PQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLG 391 (503)
Q Consensus 315 ~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~-~~-~~-~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~ 391 (503)
+.+.+.+.+......+..+. ....+++... .+ .. .+||+++|||||.++|+.|||+|.||+||..||+.|+..++
T Consensus 313 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~r~a~~~~~~gRV~L~GDAAH~~~P~~GqG~N~gi~DA~nLawkLa~vl~ 390 (665)
T 1pn0_A 313 VIANAKKIFHPYTFDVQQLD--WFTAYHIGQRVTEKFSKDERVFIAGDACHTHSPKAGQGMNTSMMDTYNLGWKLGLVLT 390 (665)
T ss_dssp HHHHHHHHHTTSCCEEEEEE--EEEEEEEEEEECSCSEETTTEEECGGGTEECCSTTCCHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCcccCceeeEE--EEEeeeccceehhhcccCCCEEEEECccccCCCcccCCcchhHHHHHHHHHHHHHHHc
Confidence 88877776654322222221 1223333221 12 23 68999999999999999999999999999999999999987
Q ss_pred CCCCCCCchhhHHHHhh
Q 010693 392 STRMIRGRPLHQKVWNG 408 (503)
Q Consensus 392 ~~~~~~~l~~y~~~~~~ 408 (503)
+......|+.|+..++.
T Consensus 391 g~a~~~lL~tYe~eR~p 407 (665)
T 1pn0_A 391 GRAKRDILKTYEEERQP 407 (665)
T ss_dssp TCBCGGGGHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHH
Confidence 65556789999987664
No 13
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=99.95 E-value=7.2e-27 Score=248.76 Aligned_cols=298 Identities=15% Similarity=0.160 Sum_probs=187.1
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccc---hhHhhhhcCchhhhh-hccCc----eEEE
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGV---WVDEFEDIGLVDCLD-KTWPM----TCVF 153 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~---~~~~l~~~~~~~~~~-~~~~~----~~~~ 153 (503)
+..+||+||||||+||++|+.|++ +|++|+||||.+.... ++..+. ..+.++.+|+.+.+. ..... ..++
T Consensus 24 ~~~~dVlIVGaGpaGl~~A~~La~-~G~~V~vlEr~~~~~~~~~~~~l~~~~~~~l~~lGl~~~~~~~~~~~~~~~~~~~ 102 (549)
T 2r0c_A 24 PIETDVLILGGGPVGMALALDLAH-RQVGHLVVEQTDGTITHPRVGTIGPRSMELFRRWGVAKQIRTAGWPGDHPLDAAW 102 (549)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCSCCSSCCCCEECHHHHHHHHHTTCHHHHHTSSCCTTSBCCEEE
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCChHHHHhhcCCcccccceEE
Confidence 456899999999999999999999 9999999999865432 222232 234467777744332 21111 1111
Q ss_pred ecC--Ccc-------------cc--cCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCC---C-
Q 010693 154 IND--HKT-------------KY--LDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDD---G- 211 (503)
Q Consensus 154 ~~~--~~~-------------~~--~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~---g- 211 (503)
+.. +.. .. ...+...+++..+.+.|.+.+.+. ++ +++|++++.+++++++++.+ |
T Consensus 103 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~~~L~~~a~~~---v~~~~~v~~~~~~~~~v~v~~~~~~~G~ 179 (549)
T 2r0c_A 103 VTRVGGHEVYRIPLGTADTRATPEHTPEPDAICPQHWLAPLLAEAVGER---LRTRSRLDSFEQRDDHVRATITDLRTGA 179 (549)
T ss_dssp ESSBTSCEEEEECCCBTTTSCCCSSCSSCCEECCHHHHHHHHHHHHGGG---EECSEEEEEEEECSSCEEEEEEETTTCC
T ss_pred eccCCCceeEeecccccccccccCCCCCcccccCHHHHHHHHHHHHHHh---cccCcEEEEEEEeCCEEEEEEEECCCCC
Confidence 111 000 00 011222388999999999999876 77 99999999988888887765 6
Q ss_pred -cEEEeceEEecCCCCcccccccCCCCCcc---ceeEEEEEEecCCCC------CCCceEEeeccCCCCCCCcccccCCC
Q 010693 212 -NEIKASLIVDASGFASSFVEYDKPRNHGY---QIAHGILAEVESHPF------DLDKMVLMDWRDSHLGNEPYLRASNL 281 (503)
Q Consensus 212 -~~i~a~~vI~A~G~~s~vr~~~~~~~~~~---~~~~g~~~~~~~~~~------~~~~~~~~d~~~~~~~~~~~~~~~g~ 281 (503)
.+++||+||+|||.+|.+|+..+....+. +.+... .+..+.. .+..+.+ .+.+++
T Consensus 180 ~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~------------~~~p~~- 244 (549)
T 2r0c_A 180 TRAVHARYLVACDGASSPTRKALGIDAPPRHRTQVFRNI--LFRAPELRSLLGERAALFFF------------LMLSSS- 244 (549)
T ss_dssp EEEEEEEEEEECCCTTCHHHHHHTCCCCBSSCCEEEEEE--EEECTTHHHHHGGGCCSEEE------------EEEETT-
T ss_pred EEEEEeCEEEECCCCCcHHHHHcCCCCCCCcccceEEEE--EEECCchHHhcCCCCceEEE------------EECCCC-
Confidence 37999999999999999998765433321 222222 2222111 0001100 011221
Q ss_pred CCCeEEEEeecCCCeEE-EecccccCCCCCCHHHHHHHHHHHHhhcCCccceEeecceecccCCCC-CC-CCCCCEEEec
Q 010693 282 KLPTFLYAMPFDSNLVF-LEETSLVSRPVLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGP-LP-VIPQSVMAIG 358 (503)
Q Consensus 282 ~~~~~~~~~P~~~~~~~-v~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~-~~-~~~~~v~liG 358 (503)
++++++|.+++..| +..... ... .+.+++.+.+.+.+.. .+.. ++... ..+++... .+ ...+||+++|
T Consensus 245 ---~~~~~~p~~~~~~~~~~~~~~-~~~-~~~~~~~~~l~~~~~~-~~~~-~~~~~--~~~~~~~~~a~~~~~grv~L~G 315 (549)
T 2r0c_A 245 ---LRFPLRALDGRGLYRLTVGVD-DAS-KSTMDSFELVRRAVAF-DTEI-EVLSD--SEWHLTHRVADSFSAGRVFLTG 315 (549)
T ss_dssp ---EEEEEEESSSSSEEEEEEECS-TTC-CSCCCHHHHHHHHBCS-CCCC-EEEEE--EEEEECCEECSCSEETTEEECG
T ss_pred ---cEEEEEEECCCcEEEEEecCC-CCC-CCHHHHHHHHHHHhCC-CCce-eEEEE--ecchhHhhhHHhhcCCcEEEEc
Confidence 35677888654333 221111 111 4455666666666543 1221 22221 12222211 11 2468999999
Q ss_pred cCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 359 STSGLVHPSTGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 359 DAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
||||.++|++|||+|.+|+||..||+.|+..+++......|+.|+..++.
T Consensus 316 DAAH~~~P~~GqG~n~gi~DA~~La~~La~~l~g~a~~~lL~~Y~~eR~~ 365 (549)
T 2r0c_A 316 DAAHTLSPSGGFGMNTGIGSAADLGWKLAATLRGWAGPGLLATYEEERRP 365 (549)
T ss_dssp GGTEECCCGGGHHHHHHHHHHHHHHHHHHHHHHTCSCTTTTHHHHHHHHH
T ss_pred cccccCCCccCCccccccHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999988765556789999987664
No 14
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=99.95 E-value=3.8e-28 Score=248.69 Aligned_cols=300 Identities=18% Similarity=0.158 Sum_probs=188.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC-CCCcccc---hhHhhhhcCchhhhhh---ccCceEEEecCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST-WPNNYGV---WVDEFEDIGLVDCLDK---TWPMTCVFINDH 157 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~-~~~~~g~---~~~~l~~~~~~~~~~~---~~~~~~~~~~~~ 157 (503)
++||+||||||+|+++|+.|++ +|++|+|||+.+... ....... ....++.+++.+.+.. .+....+...++
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~-~G~~V~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~g 84 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGR-QGHRVVVVEQARRERAINGADLLKPAGIRVVEAAGLLAEVTRRGGRVRHELEVYHDG 84 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCCC---CCCCEECHHHHHHHHHTTCHHHHHHTTCEEECEEEEEETT
T ss_pred cCCEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCCCCCccCceeeECchHHHHHHHcCcHHHHHHhCCCcceeEEEeCCC
Confidence 5899999999999999999999 999999999986541 1111222 2234667777443321 111122211111
Q ss_pred c-cccc------CCCccc-cCHHHHHHHHHHHHHhC-CcEEE-EeEEEEEEEeCCEE--EEEeCCCcEEEeceEEecCCC
Q 010693 158 K-TKYL------DRPYGR-VSRNILKTKLLENCVSN-GVKFH-KAKVWHVNHQEFES--SIVCDDGNEIKASLIVDASGF 225 (503)
Q Consensus 158 ~-~~~~------~~~~~~-v~r~~l~~~L~~~~~~~-gv~~~-~~~v~~i~~~~~~~--~v~~~~g~~i~a~~vI~A~G~ 225 (503)
. ...+ ...+++ ++|..+.+.|.+.+.+. |++++ +++|++++.+++++ .|++.+|++++||+||+|||.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~gv~i~~~~~v~~i~~~~~~v~g~v~~~~g~~~~ad~vV~AdG~ 164 (399)
T 2x3n_A 85 ELLRYFNYSSVDARGYFILMPCESLRRLVLEKIDGEATVEMLFETRIEAVQRDERHAIDQVRLNDGRVLRPRVVVGADGI 164 (399)
T ss_dssp EEEEEEETTSSCGGGCEEECCHHHHHHHHHHHHTTCTTEEEECSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECCCT
T ss_pred CEEEecchHHhcccCccccccHHHHHHHHHHHhhhcCCcEEEcCCEEEEEEEcCCceEEEEEECCCCEEECCEEEECCCC
Confidence 0 0000 112333 89999999999999987 99999 99999999988888 889999989999999999999
Q ss_pred CcccccccCCCCCc---ccee--EEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEe
Q 010693 226 ASSFVEYDKPRNHG---YQIA--HGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLE 300 (503)
Q Consensus 226 ~s~vr~~~~~~~~~---~~~~--~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~ 300 (503)
+|.+|+..+..... +... .++...++.. . +... +. +.+.+ +++|++|.+++.+...
T Consensus 165 ~s~vr~~lg~~~~~~~p~~~~~~~~~~~~~~~~-~-~~~~--~~-----------~~~~~----~~~~~~p~~~~~~~~~ 225 (399)
T 2x3n_A 165 ASYVRRRLLDIDVERRPYPSPMLVGTFALAPCV-A-ERNR--LY-----------VDSQG----GLAYFYPIGFDRARLV 225 (399)
T ss_dssp TCHHHHHTSCCCCCCCCCSSCEEEEEEECCHHH-H-HCEE--EE-----------ECTTS----CEEEEEEETTTEEEEE
T ss_pred ChHHHHHhCCCccccCCCCCCceEEEEEEecCC-C-CCcc--EE-----------EcCCC----cEEEEEEcCCCEEEEE
Confidence 99998866543221 1111 3333333221 1 1111 11 12202 4688899887544322
Q ss_pred c--ccc-cCC--CCCCHHHHHHHHHHHHhhcCCcc--ceEeec---ceecccCCC--CCC-CCCCCEEEeccCCCCcCCc
Q 010693 301 E--TSL-VSR--PVLSYKEVKRRMAARLRHMGIRV--KRVIED---EKCLIPMGG--PLP-VIPQSVMAIGSTSGLVHPS 367 (503)
Q Consensus 301 ~--~~~-~~~--~~~~~~~~~~~l~~~l~~~~~~~--~~i~~~---~~~~~p~~~--~~~-~~~~~v~liGDAa~~~~P~ 367 (503)
. +.. ... ...+.+++.+.+. ..+... ..+... ....+|+.. ..+ ...+||+++|||||.++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~ 301 (399)
T 2x3n_A 226 VSFPREEARELMADTRGESLRRRLQ----RFVGDESAEAIAAVTGTSRFKGIPIGYLNLDRYWADNVAMLGDAIHNVHPI 301 (399)
T ss_dssp EECCHHHHHHHHHSTTSHHHHHHHH----TTCCGGGHHHHHTCCCSTTCEECCCCCEECSCSEETTEEECGGGTEECCGG
T ss_pred EEeCccccccccccCCHHHHHHHHh----hcCCcchhhHHhcCCccceEEechhhcccccccccCcEEEEechhccCCCc
Confidence 2 100 000 0022334444333 332222 111111 224455543 122 2568999999999999999
Q ss_pred ccHHHHHHHHhHHHHHHHHHHHhcCCCC-CCCchhhHHHHhh
Q 010693 368 TGYMVARTMALAPALADAIAECLGSTRM-IRGRPLHQKVWNG 408 (503)
Q Consensus 368 ~G~G~~~al~~a~~lA~~l~~~l~~~~~-~~~l~~y~~~~~~ 408 (503)
+|||++.|++||..||+.|.+.++.+.+ ...++.|++.++.
T Consensus 302 ~GqG~~~al~da~~La~~L~~~~~~~~~~~~~l~~Y~~~r~~ 343 (399)
T 2x3n_A 302 TGQGMNLAIEDASALADALDLALRDACALEDALAGYQAERFP 343 (399)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHHHHhhhcccchHHHHHHHHHHHhcc
Confidence 9999999999999999999998764422 3467888877664
No 15
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=99.95 E-value=4.1e-27 Score=240.58 Aligned_cols=303 Identities=13% Similarity=0.119 Sum_probs=181.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC---CCCCcccc---hhHhhhhcCchhhhhh---ccCceEEEec
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS---TWPNNYGV---WVDEFEDIGLVDCLDK---TWPMTCVFIN 155 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~---~~~~~~g~---~~~~l~~~~~~~~~~~---~~~~~~~~~~ 155 (503)
++||+||||||+|+++|+.|++ .|++|+|||+.+.. ...+.... ....++.+|+.+.+.. .+....+...
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~-~G~~v~v~E~~~~~~~~~~~~~g~l~~~~~~~l~~lg~~~~~~~~~~~~~~~~~~~~ 80 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHK-AGIDNVILERQTPDYVLGRIRAGVLEQGMVDLLREAGVDRRMARDGLVHEGVEIAFA 80 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHH-HTCCEEEECSSCHHHHHTCCCCCEECHHHHHHHHHTTCCHHHHHHCEEESCEEEEET
T ss_pred CccEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCCcccCCCceEeECHHHHHHHHHcCCcHHHHhcCCccceEEEEEC
Confidence 5899999999999999999999 99999999987641 11111112 2345677787443322 1222223222
Q ss_pred CCccc-c---c-CCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC-CEEEEEe-CCCc--EEEeceEEecCC
Q 010693 156 DHKTK-Y---L-DRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQE-FESSIVC-DDGN--EIKASLIVDASG 224 (503)
Q Consensus 156 ~~~~~-~---~-~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~-~~~~v~~-~~g~--~i~a~~vI~A~G 224 (503)
+.... . . .....+ +++..+.+.|.+.+.+.|++++ +++|++++.++ +.+.|++ .+|+ +++||+||+|||
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~~g~~~~~~a~~vV~AdG 160 (394)
T 1k0i_A 81 GQRRRIDLKRLSGGKTVTVYGQTEVTRDLMEAREACGATTVYQAAEVRLHDLQGERPYVTFERDGERLRLDCDYIAGCDG 160 (394)
T ss_dssp TEEEEECHHHHHTSCCEEECCHHHHHHHHHHHHHHTTCEEESSCEEEEEECTTSSSCEEEEEETTEEEEEECSEEEECCC
T ss_pred CceEEeccccccCCCceEEechHHHHHHHHHHHHhcCCeEEeceeEEEEEEecCCceEEEEecCCcEEEEEeCEEEECCC
Confidence 11100 0 0 012223 6889999999999988999999 99999998764 4577777 6786 799999999999
Q ss_pred CCcccccccCCCCC-cccee--EEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEE--
Q 010693 225 FASSFVEYDKPRNH-GYQIA--HGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFL-- 299 (503)
Q Consensus 225 ~~s~vr~~~~~~~~-~~~~~--~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v-- 299 (503)
.+|.+|+..+.... .+... +++...+...+.......+. ... .+|.|+.|.+++...+
T Consensus 161 ~~S~vr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~----~g~~~~~~~~~~~~~~~~ 223 (394)
T 1k0i_A 161 FHGISRQSIPAERLKVFERVYPFGWLGLLADTPPVSHELIYA-------------NHP----RGFALCSQRSATRSQYYV 223 (394)
T ss_dssp TTCSTGGGSCGGGCEEEEEEEEEEEEEEEESSCCSCSSCEEE-------------CCT----TCCEEEEEEETTEEEEEE
T ss_pred CCcHHHHhcCccccccccccccceeEEEecCCCCCccceEEE-------------EcC----CceEEEEecCCCcEEEEE
Confidence 99999987643211 11111 12211111111111111110 001 1456666665554322
Q ss_pred ecccccCCCCCCHHHHHHHHHHHHhhc-CCcc--ceEeecceecccCCCC--CCCCCCCEEEeccCCCCcCCcccHHHHH
Q 010693 300 EETSLVSRPVLSYKEVKRRMAARLRHM-GIRV--KRVIEDEKCLIPMGGP--LPVIPQSVMAIGSTSGLVHPSTGYMVAR 374 (503)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~l~~~l~~~-~~~~--~~i~~~~~~~~p~~~~--~~~~~~~v~liGDAa~~~~P~~G~G~~~ 374 (503)
...........+.+...+.+.+.+... +... .... ....+|+... .+...+||+++|||||.++|++|||++.
T Consensus 224 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~ 301 (394)
T 1k0i_A 224 QVPLSEKVEDWSDERFWTELKARLPSEVAEKLVTGPSL--EKSIAPLRSFVVEPMQHGRLFLAGDAAHIVPPTGAKGLNL 301 (394)
T ss_dssp EECTTCCGGGCCHHHHHHHHHHTSCHHHHHHCCCCCEE--EEEEEEEEEEEEECSEETTEEECGGGTEECCGGGTCHHHH
T ss_pred EeCCCCCccccCHHHHHHHHHHhhCcccccccccCcce--eeEEEEhhhhhccccccCCEEEEechhhcCCCcccchHHH
Confidence 111111112234555555555544331 1011 0111 1123343221 1225689999999999999999999999
Q ss_pred HHHhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 375 TMALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 375 al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
||+||..||+.|...+.++ ....++.|++.++.
T Consensus 302 ai~da~~La~~L~~~~~~~-~~~~L~~Y~~~r~~ 334 (394)
T 1k0i_A 302 AASDVSTLYRLLLKAYREG-RGELLERYSAICLR 334 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CGGGGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccC-chHHHHHHHHHHHH
Confidence 9999999999999876433 24678899876653
No 16
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=99.95 E-value=5.5e-26 Score=245.99 Aligned_cols=306 Identities=18% Similarity=0.202 Sum_probs=190.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccch---hHhhhhcCchhhh-hhc--cCceEEEecC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGVW---VDEFEDIGLVDCL-DKT--WPMTCVFIND 156 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~~---~~~l~~~~~~~~~-~~~--~~~~~~~~~~ 156 (503)
..+||+||||||+||++|+.|++..|++|+||||.+.... .+..+.+ .+.++.+|+.+.+ ... +....++..+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~~V~viEr~~~~~~~g~a~~l~~~t~e~l~~lGl~~~~~~~~~~~~~~~~~~~~ 110 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDIRTCIVEQKEGPMELGQADGIACRTMEMFEAFEFADSILKEACWINDVTFWKPD 110 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTSCEEEECSSSSCCSSCSCCEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEEEC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCCCEEEEeCCCCCCCCCceeeeCHHHHHHHHHcCcHHHHHHhcccccceEEECCC
Confidence 4699999999999999999999723999999999865432 2223332 3456778874433 221 1111222111
Q ss_pred ----Ccc----------ccc-CCCccccCHHHHHHHHHHHHHhCCc--EEE-EeEEEEEEEeCC----EEEEEeC-----
Q 010693 157 ----HKT----------KYL-DRPYGRVSRNILKTKLLENCVSNGV--KFH-KAKVWHVNHQEF----ESSIVCD----- 209 (503)
Q Consensus 157 ----~~~----------~~~-~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~~----~~~v~~~----- 209 (503)
+.. ... ..+...+++..+.+.|.+.+.+.|+ +++ +++|++++.+++ .+.|++.
T Consensus 111 ~~~~g~~~~~~~~~~~~~~~~~~~~~~i~q~~l~~~L~~~a~~~g~~v~v~~~~~v~~l~~~~~~~~~~v~v~~~~~~~~ 190 (639)
T 2dkh_A 111 PGQPGRIARHGRVQDTEDGLSEFPHVILNQARVHDHYLERMRNSPSRLEPHYARRVLDVKVDHGAADYPVTVTLERCDAA 190 (639)
T ss_dssp TTSTTCEEEEEEEESSCTTSCSSCEEECCHHHHHHHHHHHHHHSTTCCCCBCSEEEEEEEECTTCSSCCEEEEEEECSGG
T ss_pred CCCCcceEeecccCcccCCCCCCceEeeCHHHHHHHHHHHHHhCCCCcEEecCCEEEEEEECCCCCcCCEEEEEEecccc
Confidence 100 000 1122238999999999999999877 888 999999998763 5777664
Q ss_pred -CC--cEEEeceEEecCCCCcccccccCCCCCc--cceeEEEEEEecCCCCCC-CceEEeeccCCCCCCCcccccCCCCC
Q 010693 210 -DG--NEIKASLIVDASGFASSFVEYDKPRNHG--YQIAHGILAEVESHPFDL-DKMVLMDWRDSHLGNEPYLRASNLKL 283 (503)
Q Consensus 210 -~g--~~i~a~~vI~A~G~~s~vr~~~~~~~~~--~~~~~g~~~~~~~~~~~~-~~~~~~d~~~~~~~~~~~~~~~g~~~ 283 (503)
+| .+++||+||+|||.+|.+|+..+....+ ....+++........+.. ..... +.. .
T Consensus 191 ~~G~~~~i~a~~vVgADG~~S~vR~~lg~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~-------------~~~-~--- 253 (639)
T 2dkh_A 191 HAGQIETVQARYVVGCDGARSNVRRAIGRQLVGDSANQAWGVMDVLAVTDFPDVRYKVA-------------IQS-E--- 253 (639)
T ss_dssp GTTCEEEEEEEEEEECCCTTCHHHHHTTCCCEECSCSCCEEEEEEEEEECCTTTTSEEE-------------EEE-T---
T ss_pred CCCCeEEEEeCEEEECCCcchHHHHHhCCCCCCCCccceEEEEEEEEccCCCccceeEE-------------EEc-C---
Confidence 45 4799999999999999999876543221 111223221111111111 01111 111 1
Q ss_pred CeEEEEeecCCC-eEE--Eecccc-----cCCCCCCHHHHHHHHHHHHhhcCCccceEeecceecccCCCCC-C-C----
Q 010693 284 PTFLYAMPFDSN-LVF--LEETSL-----VSRPVLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGPL-P-V---- 349 (503)
Q Consensus 284 ~~~~~~~P~~~~-~~~--v~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~~-~-~---- 349 (503)
.++++++|..++ .+. +..... ......+.+++.+.+.+.+......+..+. ....+++.... . .
T Consensus 254 ~g~~~~~P~~~~~~~r~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~a~~~~~~~ 331 (639)
T 2dkh_A 254 QGNVLIIPREGGHLVRFYVEMDKLDADERVASRNITVEQLIATAQRVLHPYKLEVKNVP--WWSVYEIGQRICAKYDDVV 331 (639)
T ss_dssp TEEEEEEECTTSSCEEEEEECC-----------CCCHHHHHHHHHHHHTTSCEEEEEEE--EEEEECCCCEECSCSBSCC
T ss_pred CceEEEEEcCCCcEEEEEEECCCcCcccccccCCCCHHHHHHHHHHHhCcccCcceeee--EEEecccccchhhhhhccc
Confidence 367889999877 332 221110 012335677777777666643222222221 11233332111 1 1
Q ss_pred --------CCCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 350 --------IPQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 350 --------~~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
..+||+++|||||.++|++|||+|+||+||..||+.|+..+++......|+.|++.++.
T Consensus 332 ~~~~~~~~~~gRV~L~GDAAH~~~P~~GqG~n~ai~DA~nLawkLa~vl~g~a~~~lL~~Ye~eR~~ 398 (639)
T 2dkh_A 332 DAVATPDSPLPRVFIAGDACHTHSPKAGQGMNFSMQDSFNLGWKLAAVLRKQCAPELLHTYSSERQV 398 (639)
T ss_dssp CSSCCTTSCCCCEEECGGGTEECCGGGCCTTHHHHHHHHHHHHHHHHHHTTSBCGGGGHHHHHHHHH
T ss_pred cccccccCccCcEEEEecccccCCCcccccchhhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHH
Confidence 27999999999999999999999999999999999999998765556789999887653
No 17
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=99.95 E-value=4.7e-27 Score=240.79 Aligned_cols=311 Identities=18% Similarity=0.212 Sum_probs=173.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-Ccccc-----hhHhhhhcCchhhhhh------ccCceEEE
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGV-----WVDEFEDIGLVDCLDK------TWPMTCVF 153 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~-----~~~~l~~~~~~~~~~~------~~~~~~~~ 153 (503)
.+|+||||||+||++|+.|++ +|++|+||||.+..... ..++. ....|+.+++.+.+.. ........
T Consensus 2 m~V~IVGaGpaGl~~A~~L~~-~G~~v~v~Er~~~~~~~~~G~~i~l~~~~~~~L~~lg~~~~~~~~~~~~~~~~~~~~~ 80 (412)
T 4hb9_A 2 MHVGIIGAGIGGTCLAHGLRK-HGIKVTIYERNSAASSILPGYGIHINSFGKQALQECLPAENWLAFEEASRYIGGQSRF 80 (412)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCSSCSSCCCCEEEECHHHHHHHHHHSCHHHHHHHHHHCEEECCCCEE
T ss_pred CEEEEECcCHHHHHHHHHHHh-CCCCEEEEecCCCCCcCCCceEEeeCHHHHHHHHHcCChHHHHHhhhhhcccCcceeE
Confidence 579999999999999999999 99999999998754321 22222 2345677776433211 00011111
Q ss_pred ecCCcc-------------cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC-CEEEEEeCCCcEEEece
Q 010693 154 INDHKT-------------KYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQE-FESSIVCDDGNEIKASL 218 (503)
Q Consensus 154 ~~~~~~-------------~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~-~~~~v~~~~g~~i~a~~ 218 (503)
...... .....+...++|..|.+.|.+.+ +.+++ +++|++++..+ +.++|++.||++++||+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~R~~L~~~L~~~~---~~~v~~~~~v~~~~~~~~~~v~v~~~dG~~~~adl 157 (412)
T 4hb9_A 81 YNERMRLLAVHGGISPMAGKIISEQRLSISRTELKEILNKGL---ANTIQWNKTFVRYEHIENGGIKIFFADGSHENVDV 157 (412)
T ss_dssp ECTTSCEEEC--------------CEEEEEHHHHHHHHHTTC---TTTEECSCCEEEEEECTTSCEEEEETTSCEEEESE
T ss_pred ecCCcceecccCCccccccccccccceEeeHHHHHHHHHhhc---cceEEEEEEEEeeeEcCCCeEEEEECCCCEEEeeE
Confidence 111100 00111222378889988887644 44677 89999998765 47899999999999999
Q ss_pred EEecCCCCcccccccCCCCCcccee-EEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeE----EEEeecC
Q 010693 219 IVDASGFASSFVEYDKPRNHGYQIA-HGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTF----LYAMPFD 293 (503)
Q Consensus 219 vI~A~G~~s~vr~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~----~~~~P~~ 293 (503)
||+|||.+|.+|+...+........ ..+.......+. ........+....+ ..+.+.+ +.+ .|..|..
T Consensus 158 vVgADG~~S~vR~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---~~~~~~~---~~~~~~~~~~~~~~ 230 (412)
T 4hb9_A 158 LVGADGSNSKVRKQYLPFIERFDVGVSMIIGRARLTPA-LTALLPQNFRDGTP---NSIVPKS---PDWLFISMWRAPVN 230 (412)
T ss_dssp EEECCCTTCHHHHHHSTTCCCEEEEEEEEEEEEECCHH-HHHHSCGGGTSSCC---EEECCSS---SEEEEEEEEEEESC
T ss_pred EEECCCCCcchHHHhCCCccccccceeEEEEEEecchh-hhcchhhhhccCCc---ceEeecC---CCcceeeeeecCCc
Confidence 9999999999998765543322221 122111111000 00000000000000 0001111 111 1222211
Q ss_pred C-----------CeEEEe--cc-cccC-CCCCCHHHHHHHHHHHHhhcCCccceEeec----ceecc---cCCCCCCCCC
Q 010693 294 S-----------NLVFLE--ET-SLVS-RPVLSYKEVKRRMAARLRHMGIRVKRVIED----EKCLI---PMGGPLPVIP 351 (503)
Q Consensus 294 ~-----------~~~~v~--~~-~~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~----~~~~~---p~~~~~~~~~ 351 (503)
. ...|+. .. .... ....+.+.+.+.+.+.+......+..+++. ....+ .+....+...
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~li~~~~~~~~~~~~~~~~~~~~~~~~ 310 (412)
T 4hb9_A 231 IHVEASLAEIDNFIVWVYVAATDSLPDNITDFSAEALCDLVQSRMISWDPSLHTLVQQSDMENISPLHLRSMPHLLPWKS 310 (412)
T ss_dssp TTSCGGGCCEEEEEEEEEEEEGGGSCTTGGGCCHHHHHHHHHHHTTTSCHHHHHHHHTSCTTCCEEEEEEECCCCCCCCC
T ss_pred eeEEEeccCCCceEEEEEecccccccccccccchHHHHHHHHHHhccCChHHHHHHHhcccceeccchhccccccccccc
Confidence 1 011111 11 1111 123345666666666554332221111110 00111 1111112357
Q ss_pred CCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCC-CCCchhhHHHHh
Q 010693 352 QSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTRM-IRGRPLHQKVWN 407 (503)
Q Consensus 352 ~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~-~~~l~~y~~~~~ 407 (503)
+||+++|||||.++|++|||+|+||+||..||++|+....+..+ ...|+.|++..+
T Consensus 311 grv~LiGDAAH~~~P~~GqG~n~ai~DA~~La~~L~~~~~~~~~~~~aL~~Ye~~R~ 367 (412)
T 4hb9_A 311 STVTLLGDAIHNMTPMTGSGANTALRDALLLTQKLASVASGHEELVKAISDYEQQMR 367 (412)
T ss_dssp CSEEECTHHHHCSSCCSSSHHHHHHHHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHH
T ss_pred cCEEEEEcccccCCCchhhHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999998876554 346888887655
No 18
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=99.95 E-value=2.2e-26 Score=235.62 Aligned_cols=310 Identities=15% Similarity=0.179 Sum_probs=176.7
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC---Ccccc----hhHhhhhcCchhhhhh-ccCceEEEe
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP---NNYGV----WVDEFEDIGLVDCLDK-TWPMTCVFI 154 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~---~~~g~----~~~~l~~~~~~~~~~~-~~~~~~~~~ 154 (503)
+..+||+||||||+|+++|+.|++ .|++|+|||+.+..... ..+.. ....++.+|+.+.+.. ........+
T Consensus 24 ~~~~dV~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~~~~~~~~g~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~ 102 (398)
T 2xdo_A 24 LSDKNVAIIGGGPVGLTMAKLLQQ-NGIDVSVYERDNDREARIFGGTLDLHKGSGQEAMKKAGLLQTYYDLALPMGVNIA 102 (398)
T ss_dssp CTTCEEEEECCSHHHHHHHHHHHT-TTCEEEEEECSSSTTCCCCSCCEECCTTTHHHHHHHTTCHHHHHHHCBCCCEEEE
T ss_pred cCCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCccccccCCeeeeCCccHHHHHHhcChHHHHHHhhcccceEEE
Confidence 456899999999999999999999 99999999998654321 11221 2345777887443322 111111111
Q ss_pred cCCccccc--------CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCC
Q 010693 155 NDHKTKYL--------DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGF 225 (503)
Q Consensus 155 ~~~~~~~~--------~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~ 225 (503)
+....... ...+..++|..+.+.|.+.+.+ ++++ +++|++++.+++++.|++.+|++++||+||+|||.
T Consensus 103 ~~~g~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~--~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~ 180 (398)
T 2xdo_A 103 DEKGNILSTKNVKPENRFDNPEINRNDLRAILLNSLEN--DTVIWDRKLVMLEPGKKKWTLTFENKPSETADLVILANGG 180 (398)
T ss_dssp CSSSEEEEECCCGGGTTSSCCEECHHHHHHHHHHTSCT--TSEEESCCEEEEEECSSSEEEEETTSCCEEESEEEECSCT
T ss_pred CCCCCchhhccccccCCCCCceECHHHHHHHHHhhcCC--CEEEECCEEEEEEECCCEEEEEECCCcEEecCEEEECCCc
Confidence 11111000 0122248999999999887643 5777 99999999988889999999988999999999999
Q ss_pred CcccccccCCCCCccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEec----
Q 010693 226 ASSFVEYDKPRNHGYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEE---- 301 (503)
Q Consensus 226 ~s~vr~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~---- 301 (503)
+|.+|+........+.....+...+.......... ..+. ..........+ ..++..|.+++...+..
T Consensus 181 ~S~vR~~l~~~~~~~~g~~~~~~~~~~~~~~~~~~--~~~~---~~g~~~~~~~~----~~~~~~p~~~~~~~~~~~~~~ 251 (398)
T 2xdo_A 181 MSKVRKFVTDTEVEETGTFNIQADIHQPEINCPGF--FQLC---NGNRLMASHQG----NLLFANPNNNGALHFGISFKT 251 (398)
T ss_dssp TCSCCTTTCCCCCEEEEEEEEEEEESSHHHHSHHH--HHHH---TTSEEEEEETT----EEEEEEEEETTEEEEEEEEEC
T ss_pred chhHHhhccCCCceEcceEEEEEEeCchhccCchh--Hhhc---CCceEEEecCC----CeEEEEeCCCCcEEEEEEEec
Confidence 99999876543222211222222222110000000 0000 00000000011 23444566665432111
Q ss_pred cc-ccCC---CCCCHHHHHHHHHHHHhhcCCccc-------eEeecceecccCCCCCCCCCC--CEEEeccCCCCcCCcc
Q 010693 302 TS-LVSR---PVLSYKEVKRRMAARLRHMGIRVK-------RVIEDEKCLIPMGGPLPVIPQ--SVMAIGSTSGLVHPST 368 (503)
Q Consensus 302 ~~-~~~~---~~~~~~~~~~~l~~~l~~~~~~~~-------~i~~~~~~~~p~~~~~~~~~~--~v~liGDAa~~~~P~~ 368 (503)
.. .... ...+.+...+.+.+.+......+. .+.......+|....+. ..+ ||+++|||||.++|++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~rv~LiGDAAh~~~P~~ 330 (398)
T 2xdo_A 252 PDEWKNQTQVDFQNRNSVVDFLLKEFSDWDERYKELIHTTLSFVGLATRIFPLEKPWK-SKRPLPITMIGDAAHLMPPFA 330 (398)
T ss_dssp CTTC---CCSCTTCHHHHHHHHHHHTTTSCHHHHHHHHHCSCCEEEEEEECCCCSCCC-SCCSSCEEECTHHHHCCCCTT
T ss_pred CcccccccccCcCCHHHHHHHHHHHHcCCChHHHHHHhCcccceeeeeEeccCCCCcc-cCCCccEEEEeehhccCCCcc
Confidence 10 0000 113455566666555433211111 11111112233221111 234 8999999999999999
Q ss_pred cHHHHHHHHhHHHHHHHHHHHhcCCC-CCCCchhhHHHHh
Q 010693 369 GYMVARTMALAPALADAIAECLGSTR-MIRGRPLHQKVWN 407 (503)
Q Consensus 369 G~G~~~al~~a~~lA~~l~~~l~~~~-~~~~l~~y~~~~~ 407 (503)
|||++.|++||..||+.|... .++ ....|+.|++.++
T Consensus 331 GqG~n~ai~Da~~La~~L~~~--~~~~~~~~L~~Y~~~r~ 368 (398)
T 2xdo_A 331 GQGVNSGLVDALILSDNLADG--KFNSIEEAVKNYEQQMF 368 (398)
T ss_dssp SCSHHHHHHHHHHHHHHHHSC--CSSSHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHHHHHHHhc--cCchHHHHHHHHHHHHH
Confidence 999999999999999999863 121 1345677776554
No 19
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=99.95 E-value=1.8e-26 Score=237.24 Aligned_cols=301 Identities=17% Similarity=0.146 Sum_probs=175.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCc-EEEEcCCCCCCCCCcccc-----hhHhhhhcCchhhhhh-cc--CceEEEe
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVK-VCCVDPSPLSTWPNNYGV-----WVDEFEDIGLVDCLDK-TW--PMTCVFI 154 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~-V~viE~~~~~~~~~~~g~-----~~~~l~~~~~~~~~~~-~~--~~~~~~~ 154 (503)
..+||+||||||+||++|+.|++ +|++ |+|||+.+.... ..++. ....++.+|+.+.+.. .. ....+..
T Consensus 3 ~~~dVvIVGaG~aGl~~A~~L~~-~G~~~v~v~E~~~~~~~-~g~g~~l~~~~~~~l~~lg~~~~l~~~~~~~~~~~~~~ 80 (410)
T 3c96_A 3 EPIDILIAGAGIGGLSCALALHQ-AGIGKVTLLESSSEIRP-LGVGINIQPAAVEALAELGLGPALAATAIPTHELRYID 80 (410)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-TTCSEEEEEESSSSCCC-CSCEEEECHHHHHHHHHTTCHHHHHHHSEEECEEEEEC
T ss_pred CCCeEEEECCCHHHHHHHHHHHh-CCCCeEEEEECCCCccc-ceeEEEEChHHHHHHHHCCChHHHHhhCCCcceEEEEc
Confidence 35899999999999999999999 9999 999999865432 22222 2345677787443322 11 1111111
Q ss_pred cCCcc---------cccCCCccccCHHHHHHHHHHHHHh-CC-cEEE-EeEEEEEEEeCCEEEEEeCC---C--cEEEec
Q 010693 155 NDHKT---------KYLDRPYGRVSRNILKTKLLENCVS-NG-VKFH-KAKVWHVNHQEFESSIVCDD---G--NEIKAS 217 (503)
Q Consensus 155 ~~~~~---------~~~~~~~~~v~r~~l~~~L~~~~~~-~g-v~~~-~~~v~~i~~~~~~~~v~~~~---g--~~i~a~ 217 (503)
..+.. .....+...++|..|.+.|.+.+.+ .| ++++ +++|++++. ++++.|++.+ | .+++||
T Consensus 81 ~~g~~~~~~~~~~~~~~~~~~~~i~r~~l~~~L~~~~~~~~g~~~v~~~~~v~~i~~-~~~v~v~~~~~~~g~~~~~~ad 159 (410)
T 3c96_A 81 QSGATVWSEPRGVEAGNAYPQYSIHRGELQMILLAAVRERLGQQAVRTGLGVERIEE-RDGRVLIGARDGHGKPQALGAD 159 (410)
T ss_dssp TTSCEEEEEECGGGGTCSSCEEEEEHHHHHHHHHHHHHHHHCTTSEEESEEEEEEEE-ETTEEEEEEEETTSCEEEEEES
T ss_pred CCCCEEeeccCCccccCCCCeeeeeHHHHHHHHHHHHHhhCCCcEEEECCEEEEEec-CCccEEEEecCCCCCceEEecC
Confidence 11110 0111122348899999999999876 36 5788 999999988 6667777765 7 479999
Q ss_pred eEEecCCCCcccccccCCCCCccceeEEEE---EEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCC
Q 010693 218 LIVDASGFASSFVEYDKPRNHGYQIAHGIL---AEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDS 294 (503)
Q Consensus 218 ~vI~A~G~~s~vr~~~~~~~~~~~~~~g~~---~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~ 294 (503)
+||+|||.+|.+|+...+.... ..+.|.. .....+++..+...++ +. ... .++++++|.++
T Consensus 160 ~vV~AdG~~S~vR~~l~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~-~~-----------~~~---~~~~~~~p~~~ 223 (410)
T 3c96_A 160 VLVGADGIHSAVRAHLHPDQRP-LSHGGITMWRGVTEFDRFLDGKTMIV-AN-----------DEH---WSRLVAYPISA 223 (410)
T ss_dssp EEEECCCTTCHHHHHHCTTCCC-CEEEEEEEEEEEEEESCCTTSSEEEE-EE-----------CTT---CCEEEEEECCH
T ss_pred EEEECCCccchhHHHhcCCCCC-CCcCCeeEEEeecccccccCCCeEEE-ec-----------CCC---CcEEEEEecCC
Confidence 9999999999999865443221 1122211 1111122222222111 11 001 24577778752
Q ss_pred -----Ce---EEEecccc----------cCCCCCCHHHHHHHHHHHHhhcCC-ccceEeec--ceecccCC--CCCC-CC
Q 010693 295 -----NL---VFLEETSL----------VSRPVLSYKEVKRRMAARLRHMGI-RVKRVIED--EKCLIPMG--GPLP-VI 350 (503)
Q Consensus 295 -----~~---~~v~~~~~----------~~~~~~~~~~~~~~l~~~l~~~~~-~~~~i~~~--~~~~~p~~--~~~~-~~ 350 (503)
+. .|+..... ........+++.+.+..+. .++ ....++.. ....+|+. .+.+ ..
T Consensus 224 ~~~~~g~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 301 (410)
T 3c96_A 224 RHAAEGKSLVNWVCMVPSAAVGQLDNEADWNRDGRLEDVLPFFADWD--LGWFDIRDLLTRNQLILQYPMVDRDPLPHWG 301 (410)
T ss_dssp HHHTTTCEEEEEEEEEEHHHHCCCCSSCCTTCBCCHHHHHHHHTTCC--BTTBCHHHHHHTCSEEEEEEEEECCCCSCCC
T ss_pred cccCCCCcEEEEEEEecCcccccCCCccccCCCCCHHHHHHHhcCCC--CchhHHHHHHhcCcccceeecccCCCccccc
Confidence 21 23211100 0011123344443332210 000 11111110 11122321 1222 25
Q ss_pred CCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 351 PQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 351 ~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
.+||+++|||||.++|++|||++.||+||..||+.|... ++....++.|++.++.
T Consensus 302 ~grv~LvGDAAh~~~P~~GqG~n~ai~Da~~La~~L~~~---~~~~~~L~~Ye~~r~~ 356 (410)
T 3c96_A 302 RGRITLLGDAAHLMYPMGANGASQAILDGIELAAALARN---ADVAAALREYEEARRP 356 (410)
T ss_dssp BTTEEECTHHHHCCCSSTTCTHHHHHHHHHHHHHHHHHC---SSHHHHHHHHHHHHHH
T ss_pred cCCEEEEecccCCCCCccchhHHHHHHHHHHHHHHHhcc---CCHHHHHHHHHHHHHH
Confidence 689999999999999999999999999999999999863 2223568889887764
No 20
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=99.95 E-value=1.8e-27 Score=242.02 Aligned_cols=300 Identities=14% Similarity=0.095 Sum_probs=175.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccc---hhHhhhhcCchhhhhh-c--cCceEEEec
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGV---WVDEFEDIGLVDCLDK-T--WPMTCVFIN 155 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~---~~~~l~~~~~~~~~~~-~--~~~~~~~~~ 155 (503)
+..+||+||||||+|+++|+.|++ +|++|+|||+.+.... ....+. ....++.+|+.+.+.. . .....+...
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~-~G~~v~viE~~~~~~~~~~~~~l~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~ 87 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQ-NGWDVRLHEKSSELRAFGAGIYLWHNGLRVLEGLGALDDVLQGSHTPPTYETWMH 87 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSCCCCSSEEEEEHHHHHHHHHTTCHHHHHTTCBCCSCEEEEET
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-CCCCEEEEecCCCCCCCCceEEeCccHHHHHHHcCCHHHHHhhCCCccceEEEeC
Confidence 446899999999999999999999 9999999999865432 122222 2234667777443322 1 222222222
Q ss_pred CCccc-cc---CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 156 DHKTK-YL---DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 156 ~~~~~-~~---~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
+... .. ..+...++|..+.+.|.+.+.+.|++++ +++|++++. ++ .|++.+|++++||+||+|||.+|.+|
T Consensus 88 -g~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~-~~--~v~~~~g~~~~ad~vV~AdG~~s~vr 163 (379)
T 3alj_A 88 -NKSVSKETFNGLPWRIMTRSHLHDALVNRARALGVDISVNSEAVAADP-VG--RLTLQTGEVLEADLIVGADGVGSKVR 163 (379)
T ss_dssp -TEEEEEECGGGCCEEEEEHHHHHHHHHHHHHHTTCEEESSCCEEEEET-TT--EEEETTSCEEECSEEEECCCTTCHHH
T ss_pred -CceeeeccCCCCceEEECHHHHHHHHHHHHHhcCCEEEeCCEEEEEEe-CC--EEEECCCCEEEcCEEEECCCccHHHH
Confidence 1110 01 2233458999999999999999999999 999999987 43 78888898999999999999999999
Q ss_pred cccCCCCC-ccceeEEEEEEecCC----CCC-CCce-EEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEeccc
Q 010693 231 EYDKPRNH-GYQIAHGILAEVESH----PFD-LDKM-VLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETS 303 (503)
Q Consensus 231 ~~~~~~~~-~~~~~~g~~~~~~~~----~~~-~~~~-~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~ 303 (503)
+....... .+.....+...++.. +.. ++.. ..+.+ +. . .+++|++|.+++...+..+.
T Consensus 164 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~-~----~~~~~~~p~~~~~~~~~~~~ 228 (379)
T 3alj_A 164 DSIGFKQDRWVSKDGLIRLIVPRMKKELGHGEWDNTIDMWNF----------WP-R----VQRILYSPCNENELYLGLMA 228 (379)
T ss_dssp HHHCCCEEEEEEEEEEEEEEEECCHHHHCSSCTTSEEEEECC----------SS-S----CCEEEEEECSSSEEEEEEEE
T ss_pred HHhcCCCCcCcCCcEEEEEEechhhccCCcCCcccccccceE----------EC-C----CCEEEEEECCCCcEEEEEEe
Confidence 86554211 111111222222221 111 1211 11100 11 1 25789999998864322211
Q ss_pred ccCCCCCCHHHHHHHHHHHHhhcCCccceEee----cceecccCCC--C-CCCCCCCEEEeccCCCCcCCcccHHHHHHH
Q 010693 304 LVSRPVLSYKEVKRRMAARLRHMGIRVKRVIE----DEKCLIPMGG--P-LPVIPQSVMAIGSTSGLVHPSTGYMVARTM 376 (503)
Q Consensus 304 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~----~~~~~~p~~~--~-~~~~~~~v~liGDAa~~~~P~~G~G~~~al 376 (503)
...... .+++.+.+..+.+.... +.+++. .....+++.. . .....+||+++|||||.++|++|||++.|+
T Consensus 229 ~~~~~~--~~~l~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~rv~lvGDAAh~~~P~~GqG~~~ai 305 (379)
T 3alj_A 229 PAADPR--GSSVPIDLEVWVEMFPF-LEPCLIEAAKLKTARYDKYETTKLDSWTRGKVALVGDAAHAMCPALAQGAGCAM 305 (379)
T ss_dssp CTTCTT--TTCSSCCHHHHHHHCGG-GHHHHHHHHTCTTCCEEEEEEEEESCSEETTEEECTHHHHCCCGGGSCHHHHHH
T ss_pred cCCCCC--HHHHHHHHhcCCchhcc-HHHHHhhCCccceEEecccccCCCCCcccCcEEEEEcccCCCCcchhhhHHHHH
Confidence 101110 12222222222211100 000000 0001111111 1 112458999999999999999999999999
Q ss_pred HhHHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 377 ALAPALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 377 ~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
+||..||+.|... ++....++.|++.++.
T Consensus 306 ~da~~La~~L~~~---~~~~~~l~~Y~~~r~~ 334 (379)
T 3alj_A 306 VNAFSLSQDLEEG---SSVEDALVAWETRIRP 334 (379)
T ss_dssp HHHHHHHHHTTSS---SCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccc---cCHHHHHHHHHHHHHH
Confidence 9999999988642 1112457778765543
No 21
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=99.94 E-value=3.5e-26 Score=233.99 Aligned_cols=309 Identities=13% Similarity=0.074 Sum_probs=169.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccc-----hhHhhhhcCchhhhhhccCc--eEEEec-
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGV-----WVDEFEDIGLVDCLDKTWPM--TCVFIN- 155 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~-----~~~~l~~~~~~~~~~~~~~~--~~~~~~- 155 (503)
..+||+||||||+|+++|+.|++ +|++|+|||+.+........|. ....++.+|+.+ ....... ..+...
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~-~G~~v~v~E~~~~~~~~~~~g~~l~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~~~ 81 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRD-AGVDVDVYERSPQPLSGFGTGIVVQPELVHYLLEQGVEL-DSISVPSSSMEYVDAL 81 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSCCCCSCEEECCHHHHHHHHHTTCCG-GGTCBCCCEEEEEETT
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-CCCCEEEEecCCCCCCccccccccChhHHHHHHHcCCcc-ccccccccceEEEecC
Confidence 46899999999999999999999 9999999999865322222222 234567777744 2222222 222222
Q ss_pred CCcc-cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccccc
Q 010693 156 DHKT-KYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEYD 233 (503)
Q Consensus 156 ~~~~-~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~~~ 233 (503)
++.. .....+...+.+..+.+.|.+.+ .|++++ +++|++++.+++++.|++.+|++++||+||+|||.+|.+|+..
T Consensus 82 ~g~~~~~~~~~~~~~~~~~l~~~L~~~~--~~~~i~~~~~v~~i~~~~~~v~v~~~~g~~~~ad~vV~AdG~~S~vr~~~ 159 (397)
T 2vou_A 82 TGERVGSVPADWRFTSYDSIYGGLYELF--GPERYHTSKCLVGLSQDSETVQMRFSDGTKAEANWVIGADGGASVVRKRL 159 (397)
T ss_dssp TCCEEEEEECCCCEEEHHHHHHHHHHHH--CSTTEETTCCEEEEEECSSCEEEEETTSCEEEESEEEECCCTTCHHHHHH
T ss_pred CCCccccccCcccccCHHHHHHHHHHhC--CCcEEEcCCEEEEEEecCCEEEEEECCCCEEECCEEEECCCcchhHHHHh
Confidence 1111 11112233367788888888775 589999 9999999998888999999999999999999999999999865
Q ss_pred CCCCC-ccceeEEEEEEecCCCCCCC-------ceEEeeccCCCCCCCcccccC--CCC--CCeEEEEeecCCCeEEEec
Q 010693 234 KPRNH-GYQIAHGILAEVESHPFDLD-------KMVLMDWRDSHLGNEPYLRAS--NLK--LPTFLYAMPFDSNLVFLEE 301 (503)
Q Consensus 234 ~~~~~-~~~~~~g~~~~~~~~~~~~~-------~~~~~d~~~~~~~~~~~~~~~--g~~--~~~~~~~~P~~~~~~~v~~ 301 (503)
. ... .+.....+...+.....+.. ...++ .. +.........++ |.. ...|+|..|......+
T Consensus 160 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~--- 233 (397)
T 2vou_A 160 L-GIEPTYAGYVTWRGVLQPGEVADDVWNYFNDKFTYG-LL-DDGHLIAYPIPGRENAESPRLNFQWYWNVAEGPDL--- 233 (397)
T ss_dssp H-CCCCEEEEEEEEEEEECTTSSCHHHHHHHTTEEEEE-EE-TTEEEEEEEECCSSTTSCCEEEEEEEEECCTTHHH---
T ss_pred c-cCCCCccceEEEEEEeeccccChhhhhhhcCceeEE-ec-CCCEEEEEECCCCCCccceeEEEEEEecCCCccch---
Confidence 5 221 11111222223332222211 11110 00 000000000000 000 0123333333221000
Q ss_pred ccc-cCC-----------CCCCHHHHHHHHHHHHh-hcCCccceEee--cceecccCCC-CC-CCCCCCEEEeccCCCCc
Q 010693 302 TSL-VSR-----------PVLSYKEVKRRMAARLR-HMGIRVKRVIE--DEKCLIPMGG-PL-PVIPQSVMAIGSTSGLV 364 (503)
Q Consensus 302 ~~~-~~~-----------~~~~~~~~~~~l~~~l~-~~~~~~~~i~~--~~~~~~p~~~-~~-~~~~~~v~liGDAa~~~ 364 (503)
... ... ...+.+.+. .+.+.+. .... +.++++ .....+|+.. .. ....+||+++|||||.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~grv~LiGDAAH~~ 311 (397)
T 2vou_A 234 DELMTDVRGIRLPTSVHNNSLNPHNLR-QFHSKGESLFKP-FRDLVLNASSPFVTVVADATVDRMVHGRVLLIGDAAVTP 311 (397)
T ss_dssp HHHTBCTTSCBCSSEECGGGCCHHHHH-HHHHHHTTSCHH-HHHHHHHCSSCEEEEEEEBCCSCSEETTEEECGGGTSBC
T ss_pred hhhccCCCCcccccccCcccCCHHHHH-HHHHHHHhhChH-HHHHHhccCCcceeeeeeecCCceecCcEEEEecccccc
Confidence 000 000 001222222 2222221 1111 111111 0111223211 11 23578999999999999
Q ss_pred CCcccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCchhhHHHHh
Q 010693 365 HPSTGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVWN 407 (503)
Q Consensus 365 ~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~~ 407 (503)
+|++|||+|+||+||..||+.|.. ..+....|+.|++.++
T Consensus 312 ~P~~GqG~n~ai~DA~~La~~L~~---~~~~~~~L~~Ye~~R~ 351 (397)
T 2vou_A 312 RPHAAAGGAKASDDARTLAEVFTK---NHDLRGSLQSWETRQL 351 (397)
T ss_dssp CGGGSCHHHHHHHHHHHHHHHHHH---CSCHHHHHHHHHHHHH
T ss_pred CCcchhhHHHHHHHHHHHHHHHhc---CCCHHHHHHHHHHHHH
Confidence 999999999999999999999974 1122346778877554
No 22
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=99.94 E-value=1e-24 Score=233.31 Aligned_cols=318 Identities=17% Similarity=0.169 Sum_probs=180.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccC------CCcEEEEcCCCCCCCCCcccc--hhHhhhhcCchhhhhhc------cCc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRH------SVKVCCVDPSPLSTWPNNYGV--WVDEFEDIGLVDCLDKT------WPM 149 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~------G~~V~viE~~~~~~~~~~~g~--~~~~l~~~~~~~~~~~~------~~~ 149 (503)
..+||+||||||||+++|+.|++ . |++|+||||.+..+.....|. ....++.+ +.+..... ...
T Consensus 34 ~~~DVvIVGaG~aGlaaA~~La~-~~~~~~~G~~V~vlEk~~~~g~~~~~g~~l~~~~l~~l-l~~~~~~g~~~~~~~~~ 111 (584)
T 2gmh_A 34 EEADVVIVGAGPAGLSAATRLKQ-LAAQHEKDLRVCLVEKAAHIGAHTLSGACLDPRAFEEL-FPDWKEKGAPLNTPVTE 111 (584)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HHHHTTCCCCEEEECSSSSTTTTCCCCCEECTHHHHHH-CTTHHHHTCCCCEECCE
T ss_pred cCCCEEEECcCHHHHHHHHHHHh-cccccCCCCcEEEEeCCCCCCCccccccccCHHHHHHH-HHHHHhcCCceeeeech
Confidence 46999999999999999999999 8 999999999876543222222 21222222 11110000 000
Q ss_pred eEEE-ecCCcccc--------cCCCcc-ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEE-EEeC------C
Q 010693 150 TCVF-INDHKTKY--------LDRPYG-RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESS-IVCD------D 210 (503)
Q Consensus 150 ~~~~-~~~~~~~~--------~~~~~~-~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~-v~~~------~ 210 (503)
..+. ........ ...... .+++..+.+.|.+++++.|++++ +++|+++..+++ .+. |.+. +
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~a~~~Gv~i~~g~~v~~l~~~~~g~V~gV~~~~~g~~~~ 191 (584)
T 2gmh_A 112 DRFGILTEKYRIPVPILPGLPMNNHGNYVVRLGHLVSWMGEQAEALGVEVYPGYAAAEILFHEDGSVKGIATNDVGIQKD 191 (584)
T ss_dssp EEEEEECSSCEEECCCCTTSTTCCTTCEECCHHHHHHHHHHHHHHTTCEEETTCCEEEEEECTTSSEEEEEECCEEECTT
T ss_pred hheeeeccCCCccccccCccccccCCCEEEeHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCCCEEEEEeCCccccCC
Confidence 1111 11110000 111112 38999999999999999999999 999999998763 343 6665 3
Q ss_pred C---------cEEEeceEEecCCCCccccccc----CCCCC--ccceeEEEEE--EecCCCCCCCceEE-eeccCCCCCC
Q 010693 211 G---------NEIKASLIVDASGFASSFVEYD----KPRNH--GYQIAHGILA--EVESHPFDLDKMVL-MDWRDSHLGN 272 (503)
Q Consensus 211 g---------~~i~a~~vI~A~G~~s~vr~~~----~~~~~--~~~~~~g~~~--~~~~~~~~~~~~~~-~d~~~~~~~~ 272 (503)
| .+++||+||+|||.+|.+++.. +.... ......|+.. .++.....++.+.. +.|....
T Consensus 192 G~~~~~~~~g~~i~Ad~VV~AdG~~S~vr~~l~~~~gl~~~~~p~~~g~g~~~~~~v~~~~~~~~~~~~~~g~~~~~--- 268 (584)
T 2gmh_A 192 GAPKTTFERGLELHAKVTIFAEGCHGHLAKQLYKKFDLRANCEPQTYGIGLKELWVIDEKKWKPGRVDHTVGWPLDR--- 268 (584)
T ss_dssp SCEEEEEECCCEEECSEEEECCCTTCHHHHHHHHHTTTTTTSCCCCEEEEEEEEEECCGGGCCTTEEEEEEETTSCT---
T ss_pred CCcccccCCceEEECCEEEEeeCCCchHHHHHHHHhCCCCCCCchhHHhhhhhheecCcccccCCeEEEEEeccccC---
Confidence 3 6899999999999999887643 22211 1122233322 22222223332221 1221100
Q ss_pred CcccccCCCCCCeEEEEeecC--CCeEEEecccccC--CCCCCHHHHHHHHHHHHhh--cC--CccceEeecceecccCC
Q 010693 273 EPYLRASNLKLPTFLYAMPFD--SNLVFLEETSLVS--RPVLSYKEVKRRMAARLRH--MG--IRVKRVIEDEKCLIPMG 344 (503)
Q Consensus 273 ~~~~~~~g~~~~~~~~~~P~~--~~~~~v~~~~~~~--~~~~~~~~~~~~l~~~l~~--~~--~~~~~i~~~~~~~~p~~ 344 (503)
+. .+..|++|.. ++.+.+....... ....+.. +.+.++..+ +. +...++.......++..
T Consensus 269 ---~~------~gg~~~~~~~~~~~~~~vg~~~~~~~~~~~~~~~---~~l~~~~~~p~i~~~l~~~~~~~~~~~~~~~~ 336 (584)
T 2gmh_A 269 ---HT------YGGSFLYHLNEGEPLLALGFVVGLDYQNPYLSPF---REFQRWKHHPSIKPTLEGGKRIAYGARALNEG 336 (584)
T ss_dssp ---TS------CEEEEEEECCSSSCEEEEEEEEETTCCCTTCCHH---HHHHHHTTSTTTHHHHTTCEEEEEEEEEEECC
T ss_pred ---Cc------CCceEEEEecCCCCeEEEEEEEecCcccccCChH---HHHHHHHhChHHHHHhCCCeEEEecceEccCC
Confidence 11 1224555666 6665543321111 1112222 222222221 10 00112222111122222
Q ss_pred CC--CC-CCCCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCC--CCCC---chhhHHHHhhcC-cHHHH
Q 010693 345 GP--LP-VIPQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTR--MIRG---RPLHQKVWNGLW-PIDRR 415 (503)
Q Consensus 345 ~~--~~-~~~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~--~~~~---l~~y~~~~~~~~-~~~~~ 415 (503)
+. .+ ...+|++++|||||.++|++|+|++.||+||..||+.|.+++..++ .... |+.|++.++..| ..+.+
T Consensus 337 ~~~~~~~~~~~rv~LvGDAAh~~~P~~GqG~~~Ai~da~~LA~~L~~~~~~g~~~~~~a~~~L~~Ye~~r~~~~v~~~l~ 416 (584)
T 2gmh_A 337 GFQSIPKLTFPGGLLIGCSPGFMNVPKIKGTHTAMKSGTLAAESIFNQLTSENLQSKTIGLHVTEYEDNLKNSWVWKELY 416 (584)
T ss_dssp GGGGCCCCEETTEEECTTTTCCCBTTTTBCHHHHHHHHHHHHHHHHHHHTCCCCCCSSSSCCCTHHHHHHHTSHHHHHHH
T ss_pred CcccCCccccCCEEEEcccccccCccccccHHHHHHHHHHHHHHHHHHHHcCCcchhhhhhhHHHHHHHHHHhHHHHHHH
Confidence 21 12 2568999999999999999999999999999999999999986552 2343 899999988765 34444
Q ss_pred HHH
Q 010693 416 CNR 418 (503)
Q Consensus 416 ~~~ 418 (503)
..+
T Consensus 417 ~~r 419 (584)
T 2gmh_A 417 SVR 419 (584)
T ss_dssp HTT
T ss_pred HHh
Confidence 333
No 23
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=99.92 E-value=2.8e-24 Score=227.84 Aligned_cols=304 Identities=14% Similarity=0.183 Sum_probs=179.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHcc-----------CCCcEEEEcCCCCCCCCCcccc---hhHhhhhcCchhh--hhh--
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSR-----------HSVKVCCVDPSPLSTWPNNYGV---WVDEFEDIGLVDC--LDK-- 145 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~-----------~G~~V~viE~~~~~~~~~~~g~---~~~~l~~~~~~~~--~~~-- 145 (503)
..+||+||||||||+++|+.|++. .|++|+|||+.+........+. ....++.+|+.+. +..
T Consensus 6 ~~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~~~~~~g~g~~~~p~~~~~l~~lGi~e~~~~~~~~ 85 (526)
T 2pyx_A 6 PITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESPDVATIGVGEGTWPSMRSTLSKIGIDENDFIRQCD 85 (526)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECSSCCCCCSCEECCTHHHHHHHHHTCCHHHHHHHTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCCCCCCcceeeechHhHHHHHHHcCCCHHHHHHHcC
Confidence 468999999999999999999982 6999999998654332222222 2345677788442 322
Q ss_pred ----------ccCc-------eE-EEecCC--------ccc----------------------------------c--cC
Q 010693 146 ----------TWPM-------TC-VFINDH--------KTK----------------------------------Y--LD 163 (503)
Q Consensus 146 ----------~~~~-------~~-~~~~~~--------~~~----------------------------------~--~~ 163 (503)
.|.. .. +..... ... . ..
T Consensus 86 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~v~~q~~~~~~~~~~~~~~~~~~~~~ 165 (526)
T 2pyx_A 86 ASFKQGSRFINWCKDPQSNVADSYLHPFSLPHGHQELDLCPYWLPHAEQVSFAEAVCSQQVLTQLGLAPKSIVTAQYHFQ 165 (526)
T ss_dssp CEEECEEEEESCSSCCBTTBCCEEEEESSCCTTTTTCCCHHHHGGGTTTSCHHHHHCSHHHHHHTTBCSSCTTSCTTCCS
T ss_pred CEEECCCcccCCCccccCCCCCceecCCCCCCCCCCCChhHHHHhhhhccCchhhcccccchhhhccchhhhhccccCCC
Confidence 1321 11 111100 000 0 00
Q ss_pred CCccc-cCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCC--EEEEEeCCCcEEEeceEEecCCCCccc-ccccCCCC
Q 010693 164 RPYGR-VSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEF--ESSIVCDDGNEIKASLIVDASGFASSF-VEYDKPRN 237 (503)
Q Consensus 164 ~~~~~-v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vI~A~G~~s~v-r~~~~~~~ 237 (503)
.++++ +++..+.+.|.+.+.+ .|++++ + +|+++..+++ .+.|.+.+|.+++||+||+|||.+|.+ ++..+...
T Consensus 166 ~~~~~~~~r~~l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~AdG~~S~~~~~~lg~~~ 244 (526)
T 2pyx_A 166 NNYGYHLNAAKFSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNGEISGQLFIDCTGAKSLLLGEHLQVPF 244 (526)
T ss_dssp SCCEEEECHHHHHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECSGGGCCCCCCCTCCCE
T ss_pred CCeeEEEcHHHHHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCc
Confidence 12223 8999999999999998 899999 6 6999988654 346777887789999999999999988 45443321
Q ss_pred Cccc----eeEEEEEEecCCC--CCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccCCCCCC
Q 010693 238 HGYQ----IAHGILAEVESHP--FDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRPVLS 311 (503)
Q Consensus 238 ~~~~----~~~g~~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~~~~~~ 311 (503)
..+. ...++...+.... -........ .... .+|+|.+|..++... .... .....+
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~---~g~~~~~pl~~~~~~-~~v~--~~~~~~ 305 (526)
T 2pyx_A 245 LSQKSVLFNDRALAIQVPYSDANSPIASCTHS-------------TAQP---NGWIWDIGLPTRKGV-GYVY--SSSHTN 305 (526)
T ss_dssp EECHHHHCCCEEEEEEEECSSTTCCCCSSEEE-------------EEET---TEEEEEEECSSEEEE-EEEE--CTTTCC
T ss_pred ccccccccCccEEEEEeeccCCCCCCCCceeE-------------EecC---CCeEEEeeCCCceEE-EEEe--cCCCCC
Confidence 1111 1122222222110 000000110 0011 368999999875322 1110 111223
Q ss_pred HHHHHHHHHHHHhhcCCccceEeecceecccCCC--CCCCCCCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHH
Q 010693 312 YKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGG--PLPVIPQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAEC 389 (503)
Q Consensus 312 ~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~--~~~~~~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~ 389 (503)
.++..+.+.+++...+..+. ..+...+++.. ......+||+++|||||.++|++|+|++.|+++|..||+.|...
T Consensus 306 ~~~~~~~l~~~l~~~~~~l~---~~~~~~~~~~~~~~~~~~~grv~LiGDAAh~~~P~~GqGi~~ai~da~~La~~L~~~ 382 (526)
T 2pyx_A 306 DIDAQKTLFNYLGVDGAAAD---KLEPRQLAINPGYRAKCWQNNCIAIGMAAGFIEPLEASALALIEWTASTLAQQLPPN 382 (526)
T ss_dssp HHHHHHHHHHHHTCCHHHHH---HCCCEEEECCCEEESCSEETTEEECGGGTEECCCTTCHHHHHHHHHHHHHHHTCCSC
T ss_pred hHHHHHHHHHHHHhcCcccc---cCCceEEecccCccccccCCCEEEEEhhhcccCccccccHHHHHHHHHHHHHHhhhc
Confidence 45566666666643211111 01112233321 11235799999999999999999999999999999988877521
Q ss_pred hcCCCCCCCchhhHHHHhhcCcH
Q 010693 390 LGSTRMIRGRPLHQKVWNGLWPI 412 (503)
Q Consensus 390 l~~~~~~~~l~~y~~~~~~~~~~ 412 (503)
. +.....++.|++.++..|..
T Consensus 383 ~--~~~~~~l~~Y~~~~~~~~~~ 403 (526)
T 2pyx_A 383 R--MVMDTISARVNERYQQHWQQ 403 (526)
T ss_dssp H--HHHHHHHHHHHHHHHHHHHH
T ss_pred C--CcCHHHHHHHHHHHHHHHHH
Confidence 0 11124678898887765544
No 24
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=99.91 E-value=4.5e-23 Score=219.17 Aligned_cols=297 Identities=12% Similarity=0.105 Sum_probs=178.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHcc--CCCcEEEEcCCCCCCCCCcccc---hhH-hhhhcCchhh--hhh----------
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSR--HSVKVCCVDPSPLSTWPNNYGV---WVD-EFEDIGLVDC--LDK---------- 145 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~--~G~~V~viE~~~~~~~~~~~g~---~~~-~l~~~~~~~~--~~~---------- 145 (503)
..+||+|||||++|+++|+.|++. .|++|+|||+.+........+. ... .++.+|+.+. +..
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~~~~~~~~l~~lG~~~~~~~~~~~~~~~~g~~ 83 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQANITLIESAAIPRIGVGEATIPSLQKVFFDFLGIPEREWMPQVNGAFKAAIK 83 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECSSSCCCCSCEECCTHHHHHTHHHHTCCHHHHGGGGTCEEECEEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCCCCCCcCCCcccchhHHHHHHHHhCCCHHHHHHhcCchhhCCcc
Confidence 468999999999999999999982 5999999998653322211121 223 3455565321 221
Q ss_pred --ccCc-------eEEEecCCc---------------------ccc------------------------cCCCccc-cC
Q 010693 146 --TWPM-------TCVFINDHK---------------------TKY------------------------LDRPYGR-VS 170 (503)
Q Consensus 146 --~~~~-------~~~~~~~~~---------------------~~~------------------------~~~~~~~-v~ 170 (503)
.|.. ...+...+. ... ...++++ ++
T Consensus 84 ~~~w~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~i~ 163 (538)
T 2aqj_A 84 FVNWRKSPDPSRDDHFYHLFGNVPNCDGVPLTHYWLRKREQGFQQPMEYACYPQPGALDGKLAPCLSDGTRQMSHAWHFD 163 (538)
T ss_dssp EESCSSSCCTTSCCEEEEESSCCCEETTEEHHHHHHHHHHTTCCSCHHHHHCSCHHHHHTTBCSBCTTCCBCSCCEEEEC
T ss_pred ccCcCcccccCCCCceECCCCccCccccCchhHHHHHhcccccccCccccccccccHhhhccchHhhcCCcCCCccEEEe
Confidence 1211 011111110 000 0012333 89
Q ss_pred HHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC--EEEEEeCCCcEEEeceEEecCCCCccccc-ccCCCCCc----cce
Q 010693 171 RNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF--ESSIVCDDGNEIKASLIVDASGFASSFVE-YDKPRNHG----YQI 242 (503)
Q Consensus 171 r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vI~A~G~~s~vr~-~~~~~~~~----~~~ 242 (503)
+..+.+.|.+.+.+.|++++ + +|+++..+++ .+.|.+.+|++++||+||+|+|.+|.++. ..+..... ...
T Consensus 164 ~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~g~~~~v~~~~g~~i~ad~vV~A~G~~s~~~~~~lg~~~~~~~~~~~~ 242 (538)
T 2aqj_A 164 AHLVADFLKRWAVERGVNRVVD-EVVDVRLNNRGYISNLLTKEGRTLEADLFIDCSGMRGLLINQALKEPFIDMSDYLLC 242 (538)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEETTSCEECCSEEEECCGGGCCCCCCCTCCCEEECTTTCCC
T ss_pred HHHHHHHHHHHHHHCCCEEEEe-eEeEEEEcCCCcEEEEEECCCcEEEeCEEEECCCCchhhHHHHhCCCcccccccccc
Confidence 99999999999999999999 6 8999988654 35788888888999999999999998854 32221100 101
Q ss_pred eEEEEEEecCCC----CCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccCCCCCCHHHHHHH
Q 010693 243 AHGILAEVESHP----FDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRPVLSYKEVKRR 318 (503)
Q Consensus 243 ~~g~~~~~~~~~----~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~~~~~~~~~~~~~ 318 (503)
..++...+.... ..+... . .... .+|+|++|..++.. ++... .....+.++..+.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~---~g~~~~~p~~~~~~-~g~v~--~~~~~~~~~~~~~ 301 (538)
T 2aqj_A 243 DSAVASAVPNDDARDGVEPYTS-S--------------IAMN---SGWTWKIPMLGRFG-SGYVF--SSHFTSRDQATAD 301 (538)
T ss_dssp CEEEEEEEECCHHHHCCCSSEE-E--------------EECS---SEEEEEEEETTEEE-EEEEE--CTTTSCHHHHHHH
T ss_pred ceEEEEecccCCcccCCCCcee-e--------------eecC---CceEEEecCCCceE-EEEEE--cCCCCChHHHHHH
Confidence 122222222110 111100 0 0011 36899999987532 22211 1112345666777
Q ss_pred HHHHHhhcCCccceEeecceecccCCC--CCCCCCCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCCC
Q 010693 319 MAARLRHMGIRVKRVIEDEKCLIPMGG--PLPVIPQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTRMI 396 (503)
Q Consensus 319 l~~~l~~~~~~~~~i~~~~~~~~p~~~--~~~~~~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~~ 396 (503)
+.+.+....+. +...+++.. ..+.+.+||+++|||||.++|++|+|++.|+++|..||+.|.. .+...
T Consensus 302 l~~~~~~~~~~-------~~~~~~~~~~~~~~~~~grvvliGDAAh~~~P~~gqG~~~a~~da~~La~~L~~---~~~~~ 371 (538)
T 2aqj_A 302 FLKLWGLSDNQ-------PLNQIKFRVGRNKRAWVNNCVSIGLSSCFLEPLESTGIYFIYAALYQLVKHFPD---TSFDP 371 (538)
T ss_dssp HHHHHTCCTTC-------CCEEEECCCEEESCSEETTEEECGGGTEECCGGGSCHHHHHHHHHHHHHHTCCB---TTCCH
T ss_pred HHHHhcCCCCC-------CceEEeeccccccccccCCEEEEcccccccCcchhccHHHHHHHHHHHHHHhhc---cCCCH
Confidence 77766432211 112233321 1123679999999999999999999999999999998877641 22223
Q ss_pred CCchhhHHHHhhcCcH
Q 010693 397 RGRPLHQKVWNGLWPI 412 (503)
Q Consensus 397 ~~l~~y~~~~~~~~~~ 412 (503)
..++.|++.++..|..
T Consensus 372 ~~l~~Y~~~~~~~~~~ 387 (538)
T 2aqj_A 372 RLSDAFNAEIVHMFDD 387 (538)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4678898887765433
No 25
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=99.91 E-value=3.5e-23 Score=218.74 Aligned_cols=212 Identities=16% Similarity=0.104 Sum_probs=133.6
Q ss_pred cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE--EEEEeCCCcEEEeceEEecCCCCccccc-ccCCCC------C
Q 010693 169 VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE--SSIVCDDGNEIKASLIVDASGFASSFVE-YDKPRN------H 238 (503)
Q Consensus 169 v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~--~~v~~~~g~~i~a~~vI~A~G~~s~vr~-~~~~~~------~ 238 (503)
+++..+.+.|.+.+.+.|++++ + +|+++..++++ +.|.+.+|++++||+||+|+|.+|.+++ ..+... .
T Consensus 170 ~~~~~l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g~~~~ad~vV~A~G~~S~~~~~~~g~~~~~~~~~~ 248 (511)
T 2weu_A 170 FDADEVARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQHGEISGDLFVDCTGFRGLLINQTLGGRFQSFSDVL 248 (511)
T ss_dssp ECHHHHHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSSCEEECSEEEECCGGGCCCCCCCTCCCEEECTTTC
T ss_pred EcHHHHHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCCCEEEcCEEEECCCcchHHHHHHhCCCCccccccC
Confidence 8999999999999999999999 7 99999886543 6788888888999999999999998854 333221 0
Q ss_pred ccceeEEEEEEecCCC-CCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccCCCCCCHHHHHH
Q 010693 239 GYQIAHGILAEVESHP-FDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRPVLSYKEVKR 317 (503)
Q Consensus 239 ~~~~~~g~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~~~~~~~~~~~~ 317 (503)
.......+......+. ..+. .... .. . .+|+|++|..+. ..++.... ....+.++..+
T Consensus 249 ~~~~~~~~~~~~~~~~~~~~~--~~~~-----------~~-~----~g~~~~~P~~~~-~~~g~~~~--~~~~~~~~~~~ 307 (511)
T 2weu_A 249 PNNRAVALRVPRENDEDMRPY--TTAT-----------AM-S----AGWMWTIPLFKR-DGNGYVYS--DEFISPEEAER 307 (511)
T ss_dssp CCCEEEEEEEECSSGGGCCSS--EEEE-----------EE-T----TEEEEEEECSSE-EEEEEEEC--TTTSCHHHHHH
T ss_pred cccceEEEEeccCCCCCCCcc--eece-----------ec-C----CCcEEEEECCCc-eEEEEEEC--CCCCCHHHHHH
Confidence 1111122222221110 1111 0000 11 1 368999999873 33322111 12335566666
Q ss_pred HHHHHHhhcCCccceEeecceecccCC-CCCC-CCCCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCC
Q 010693 318 RMAARLRHMGIRVKRVIEDEKCLIPMG-GPLP-VIPQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTRM 395 (503)
Q Consensus 318 ~l~~~l~~~~~~~~~i~~~~~~~~p~~-~~~~-~~~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~ 395 (503)
.+.+.+.... .. .+...+++. +..+ ...+|++++|||||.++|++|+|++.|+++|..||+.|.. .+..
T Consensus 308 ~l~~~~~~~~-~~-----~~~~~~~~~~~~~~~~~~~rv~liGDAAh~~~P~~g~G~~~a~~da~~La~~l~~---~~~~ 378 (511)
T 2weu_A 308 ELRSTVAPGR-DD-----LEANHIQMRIGRNERTWINNCVAVGLSAAFVEPLESTGIFFIQHAIEQLVKHFPG---ERWD 378 (511)
T ss_dssp HHHHHHCTTC-TT-----SCCEEEECCCEEESCSEETTEEECGGGTEECCGGGCCHHHHHHHHHHHHHHTCCC---TTCC
T ss_pred HHHHHhCccc-cc-----ccceeEEeeccccccccCCCEEEEechhhccCccccccHHHHHHHHHHHHHHhcc---CCCC
Confidence 6666653211 01 111223321 1122 2468999999999999999999999999999998888752 2222
Q ss_pred CCCchhhHHHHhhcCc
Q 010693 396 IRGRPLHQKVWNGLWP 411 (503)
Q Consensus 396 ~~~l~~y~~~~~~~~~ 411 (503)
...++.|++.++..+.
T Consensus 379 ~~~l~~Y~~~~~~~~~ 394 (511)
T 2weu_A 379 PVLISAYNERMAHMVD 394 (511)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3467889887765443
No 26
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=99.91 E-value=4.1e-24 Score=217.46 Aligned_cols=288 Identities=13% Similarity=0.043 Sum_probs=163.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccc--hhHhhh---hcCch-hh-hh---hccCceEEE
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGV--WVDEFE---DIGLV-DC-LD---KTWPMTCVF 153 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~--~~~~l~---~~~~~-~~-~~---~~~~~~~~~ 153 (503)
.||+||||||+|+++|+.|++ + |++|+|||+.+.... ..++. +...+. ..++. +. +. ..+....+.
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~-~~~G~~V~v~E~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQ-ARPLWAIDIVEKNDEQEV-LGWGVVLPGRPGQHPANPLSYLDAPERLNPQFLEDFKLV 78 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSCTTCC-CCSEEEEESCTTTCTTCGGGGSSCGGGGCCEEECCEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCCCCEEEEECCCCCCc-ceeEEEeCcHHHHhhcCcchhhhhhHHHhhccccceEEE
Confidence 489999999999999999999 8 999999999865421 11111 111111 11111 11 11 122233333
Q ss_pred ecCCccc-ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccc
Q 010693 154 INDHKTK-YLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 154 ~~~~~~~-~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
..+.... ....++..++|..+.+.|.+.+.+.|++++ +++|++++.. .+++||+||+|||.+|. |+
T Consensus 79 ~~g~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~gv~i~~~~~v~~i~~~-----------~~~~ad~vV~AdG~~S~-R~ 146 (381)
T 3c4a_A 79 HHNEPSLMSTGVLLCGVERRGLVHALRDKCRSQGIAIRFESPLLEHGEL-----------PLADYDLVVLANGVNHK-TA 146 (381)
T ss_dssp ESSSEEECCCCSCEEEEEHHHHHHHHHHHHHHTTCEEETTCCCCSGGGC-----------CGGGCSEEEECCGGGGG-TC
T ss_pred eCCeeEEecCCCceeeecHHHHHHHHHHHHHHCCCEEEeCCEeccchhc-----------ccccCCEEEECCCCCch-HH
Confidence 2211100 012233348999999999999999999999 8999887531 13689999999999999 87
Q ss_pred ccC----CCCCccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEE--Eecccc-
Q 010693 232 YDK----PRNHGYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVF--LEETSL- 304 (503)
Q Consensus 232 ~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~--v~~~~~- 304 (503)
... +..........+.. +.. ..+ .....+. +...| ..+++++|.+++... +..+..
T Consensus 147 ~l~~~~g~~~~~~~~~~~~~~-~~~-~~~-~~~~~~~-----------~~~~g---~~~~~~~p~~~~~~~~~~~~~~~~ 209 (381)
T 3c4a_A 147 HFTEALVPQVDYGRNKYIWYG-TSQ-LFD-QMNLVFR-----------THGKD---IFIAHAYKYSDTMSTFIVECSEET 209 (381)
T ss_dssp CSSGGGCCCCEEEEEEEEEEE-ESS-CCS-SEEEEEE-----------EETTE---EEEEEEEECSSSCEEEEEEECHHH
T ss_pred hhhhhcCCCcccCCccEEEEe-cCC-CCC-cceeeEe-----------eCCCc---EEEEEEEEecCCeEEEEEECCccc
Confidence 542 21111111112211 111 111 1111111 11122 222346888876543 222110
Q ss_pred ---cCCCCCCHHHHHHHHHHHHhhcCCccceEeecceecccCC--CCCC-CCCCCEEEeccCCCCcCCcccHHHHHHHHh
Q 010693 305 ---VSRPVLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMG--GPLP-VIPQSVMAIGSTSGLVHPSTGYMVARTMAL 378 (503)
Q Consensus 305 ---~~~~~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~--~~~~-~~~~~v~liGDAa~~~~P~~G~G~~~al~~ 378 (503)
......+.++..+.+.+.+....... +++......++.. .+.+ ...+||+++|||||.++|++|||+++||+|
T Consensus 210 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~grv~LvGDAAh~~~P~~GqG~~~al~D 288 (381)
T 3c4a_A 210 YARARLGEMSEEASAEYVAKVFQAELGGH-GLVSQPGLGWRNFMTLSHDRCHDGKLVLLGDALQSGHFSIGHGTTMAVVV 288 (381)
T ss_dssp HHHTTSSSSCHHHHHHHHHHHTHHHHTTC-CCBCCTTTCSEEEEECCCSCSEETTEEECGGGTCCCCGGGCCHHHHHHHH
T ss_pred cccCCcccCChHHHHHHHHHHhcccCCCc-hhhcCCCcceeeeccccCCCcccCCEEEEEccccccCCCccccHHHHHHH
Confidence 11133456666666766665432111 2222111011111 1112 256899999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCchhhHHHHhh
Q 010693 379 APALADAIAECLGSTRMIRGRPLHQKVWNG 408 (503)
Q Consensus 379 a~~lA~~l~~~l~~~~~~~~l~~y~~~~~~ 408 (503)
|..||++|... .+....++.|++.++.
T Consensus 289 a~~La~~L~~~---~~~~~aL~~Y~~~r~~ 315 (381)
T 3c4a_A 289 AQLLVKALCTE---DGVPAALKRFEERALP 315 (381)
T ss_dssp HHHHHHHHHHS---SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcc---ccHHHHHHHHHHHHHH
Confidence 99999999864 2223467778776553
No 27
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=99.91 E-value=6.7e-23 Score=218.24 Aligned_cols=297 Identities=13% Similarity=0.125 Sum_probs=176.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHcc--CCCcEEEEcCCCCCCCCCcccc---hhH-hhhhcCchhh--hhh----------
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSR--HSVKVCCVDPSPLSTWPNNYGV---WVD-EFEDIGLVDC--LDK---------- 145 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~--~G~~V~viE~~~~~~~~~~~g~---~~~-~l~~~~~~~~--~~~---------- 145 (503)
..+||+|||||+||+++|+.|++. .|++|+|||+.+........+. ... .++.+|+.+. +..
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~~~~~~~~g~~~~p~~~~~~l~~lGi~~~~~~~~~~~~~~~g~~ 103 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTADITLLQAPDIPTLGVGEATIPNLQTAFFDFLGIPEDEWMRECNASYKVAIK 103 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECCCCCCCCCCEECCTHHHHHTHHHHTCCHHHHHHHTTCEEECEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCCCCCccceeeeechhHHHHHHHHhCCChHHHHHhcCCeEEEeee
Confidence 468999999999999999999982 5899999998654322111121 233 4566676322 221
Q ss_pred --ccCce---------------EEEecCC-----------------------c-c---c-----cc--------------
Q 010693 146 --TWPMT---------------CVFINDH-----------------------K-T---K-----YL-------------- 162 (503)
Q Consensus 146 --~~~~~---------------~~~~~~~-----------------------~-~---~-----~~-------------- 162 (503)
.|... ..+.... . . . .+
T Consensus 104 ~~~w~~~~~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (550)
T 2e4g_A 104 FINWRTAGEGTSEARELDGGPDHFYHSFGLLKYHEQIPLSHYWFDRSYRGKTVEPFDYACYKEPVILDANRSPRRLDGSK 183 (550)
T ss_dssp EESSSSCCCCCSSCCEETTEESEEEEESSCCCEETTEEHHHHHHHHHHTTSCCCCHHHHHCSHHHHHHTTBCSBCTTSCB
T ss_pred EeecccccccccccccccCCCCeeEecCCccCCCCcccHHHHHHhhcccccccccccccccchhhHHHhhhhhHhhcCCC
Confidence 12211 1111100 0 0 0 00
Q ss_pred CCCccc-cCHHHHHHHHHHHHHhC-CcEEE-EeEEEEEEEeCCE--EEEEeCCCcEEEeceEEecCCCCcccc-cccCCC
Q 010693 163 DRPYGR-VSRNILKTKLLENCVSN-GVKFH-KAKVWHVNHQEFE--SSIVCDDGNEIKASLIVDASGFASSFV-EYDKPR 236 (503)
Q Consensus 163 ~~~~~~-v~r~~l~~~L~~~~~~~-gv~~~-~~~v~~i~~~~~~--~~v~~~~g~~i~a~~vI~A~G~~s~vr-~~~~~~ 236 (503)
..++++ +++..+.+.|.+.+.+. |++++ + +|+++..++++ +.|.+.+|++++||+||+|+|.+|.++ +..+..
T Consensus 184 ~~~~~~~~~~~~l~~~L~~~~~~~~Gv~i~~~-~V~~i~~~~~g~~~~v~~~~G~~i~ad~vI~A~G~~S~~~~~~lg~~ 262 (550)
T 2e4g_A 184 VTNYAWHFDAHLVADFLRRFATEKLGVRHVED-RVEHVQRDANGNIESVRTATGRVFDADLFVDCSGFRGLLINKAMEEP 262 (550)
T ss_dssp CSCCEEEECHHHHHHHHHHHHHHHSCCEEEEC-CEEEEEECTTSCEEEEEETTSCEEECSEEEECCGGGCCCCCCCTCCC
T ss_pred CCCcceEEcHHHHHHHHHHHHHhcCCcEEEEC-eEeEEEEcCCCCEEEEEECCCCEEECCEEEECCCCchhhHHHHhCCC
Confidence 123333 89999999999999987 99999 7 99999876543 678888888899999999999999884 333321
Q ss_pred CC------ccceeEEEEEEecCC--CCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccCCC
Q 010693 237 NH------GYQIAHGILAEVESH--PFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSRP 308 (503)
Q Consensus 237 ~~------~~~~~~g~~~~~~~~--~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~~~ 308 (503)
.. .......+......+ ...+... . .... .+|+|++|..+. ..++.... ..
T Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~---~g~~~~ipl~~~-~~~g~v~~--~~ 321 (550)
T 2e4g_A 263 FLDMSDHLLNDSAVATQVPHDDDANGVEPFTS-A--------------IAMK---SGWTWKIPMLGR-FGTGYVYS--SR 321 (550)
T ss_dssp EEECTTTCCCCEEEEEEEECCHHHHCCCSSEE-E--------------EECS---SEEEEEEECSSE-EEEEEEEC--TT
T ss_pred cccccccccccceEEEeecccCCcccCCCcee-e--------------eecC---CceEEEccCCCc-cceEEEEe--cC
Confidence 10 111111111111100 0111100 0 0011 378999999773 22222111 11
Q ss_pred CCCHHHHHHHHHHHHhhcCCccceEeecceecccCC-CCCC-CCCCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHHH
Q 010693 309 VLSYKEVKRRMAARLRHMGIRVKRVIEDEKCLIPMG-GPLP-VIPQSVMAIGSTSGLVHPSTGYMVARTMALAPALADAI 386 (503)
Q Consensus 309 ~~~~~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~-~~~~-~~~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l 386 (503)
..+.++..+.+.+.+.... ... ....+++. +..+ .+.+|++++|||||.++|++|+|++.|+++|..||+.|
T Consensus 322 ~~~~~~~~~~l~~~~~~~p-~l~-----~~~~i~~~~~~~~~~~~~rvvliGDAAh~~~P~~GqGi~~a~~da~~La~~L 395 (550)
T 2e4g_A 322 FATEDEAVREFCEMWHLDP-ETQ-----PLNRIRFRVGRNRRAWVGNCVSIGTSSCFVEPLESTGIYFVYAALYQLVKHF 395 (550)
T ss_dssp TSCHHHHHHHHHHHTTCCT-TTS-----CCEEEECCCEEESCSEETTEEECSTTTEECCGGGSCHHHHHHHHHHHHHHTC
T ss_pred CCChHHHHHHHHHhhCcCc-ccC-----CCceEEecCCCccccccCCEEEEehhhcccCccchhhHHHHHHHHHHHHHhc
Confidence 2345666666666663321 010 01122222 1122 35789999999999999999999999999999988776
Q ss_pred HHHhcCCCCCCCchhhHHHHhhcCc
Q 010693 387 AECLGSTRMIRGRPLHQKVWNGLWP 411 (503)
Q Consensus 387 ~~~l~~~~~~~~l~~y~~~~~~~~~ 411 (503)
.. .+.....++.|++.++..+.
T Consensus 396 ~~---~~~~~~~l~~Y~~~~~~~~~ 417 (550)
T 2e4g_A 396 PD---KSLNPVLTARFNREIETMFD 417 (550)
T ss_dssp CC---TTCCHHHHHHHHHHHHHHHH
T ss_pred cc---cCCCHHHHHHHHHHHHHHHH
Confidence 52 22233467888887765443
No 28
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=99.84 E-value=6.5e-20 Score=189.33 Aligned_cols=289 Identities=15% Similarity=0.145 Sum_probs=150.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC--C--c--c--cchhHhhhhcCchh--hhhhccCceEEE
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP--N--N--Y--GVWVDEFEDIGLVD--CLDKTWPMTCVF 153 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~--~--~--~--g~~~~~l~~~~~~~--~~~~~~~~~~~~ 153 (503)
.++||+||||||+|+++|+.|++ +|++|+|||+.+..... + . + +........+++.. ..........+.
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~-~G~~V~viE~~~~~~~~~g~~~~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~ 99 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQ-HDVDVTVYTDRKPDEYSGLRLLNTVAHNAVTVQREVALDVNEWPSEEFGYFGHYYY 99 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHH-TTCEEEEEESCCGGGSTTSCCCCCCCBCHHHHHHHHHTTCCCSCHHHHCEEEEEEE
T ss_pred CCCCEEEECCcHHHHHHHHHHHH-CCCeEEEEcCCChHhhcccccccchhccchhhhhhhhcChhhhhhhcccccceeEE
Confidence 45899999999999999999999 99999999988632211 1 1 1 11112223444311 111122223333
Q ss_pred ecCCcccccC---CCcc-ccCHHHHHHHHHHHHHhCCcEEEEeEE--EEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 154 INDHKTKYLD---RPYG-RVSRNILKTKLLENCVSNGVKFHKAKV--WHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 154 ~~~~~~~~~~---~~~~-~v~r~~l~~~L~~~~~~~gv~~~~~~v--~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+.+....... ...+ .+++..+...|.+.+++.|++++...+ .+++ .....+|+||+|+|.+|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~v~~~~l~~~L~~~~~~~Gv~v~~~~v~~~~l~------------~~~~~ad~VV~AdG~~S 167 (430)
T 3ihm_A 100 VGGPQPMRFYGDLKAPSRAVDYRLYQPMLMRALEARGGKFCYDAVSAEDLE------------GLSEQYDLLVVCTGKYA 167 (430)
T ss_dssp ECSSSCEEEEEEEEEEEBEECHHHHHHHHHHHHHHTTCEEEECCCCGGGHH------------HHHTTSSEEEECCCCTT
T ss_pred ECCCCccccchhcCCcceeecHHHHHHHHHHHHHHcCCEEEEEecchhhhh------------hhcccCCEEEECCCCcc
Confidence 3322111111 1122 389999999999999999998873211 1111 00126899999999999
Q ss_pred ccccccCCC-----CCc-cceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeec--CCCeEE-
Q 010693 228 SFVEYDKPR-----NHG-YQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPF--DSNLVF- 298 (503)
Q Consensus 228 ~vr~~~~~~-----~~~-~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~--~~~~~~- 298 (503)
.++.+.... ... .....++...+..+. +....+. +.++ .+.++.+|. .++...
T Consensus 168 ~~~~~~~~~~~~~~~~p~r~~~~~~~~g~~~~~--~~~~~~~------------~~~~----~G~~~~~p~~~~~g~~~~ 229 (430)
T 3ihm_A 168 LGKVFEKQSENSPFEKPQRALCVGLFKGIKEAP--IRAVTMS------------FSPG----HGELIEIPTLSFNGMSTA 229 (430)
T ss_dssp GGGGSCBCGGGCCCSSCSSEEEEEEEESBCCCS--SCCEEEE------------EETT----TEEEEEEEEEETTEEEEE
T ss_pred hHHhccCCCCCCcccCCCeeEEEEEEccCCCCC--cCeeeee------------ecCC----CcceEEecccCCCcceEE
Confidence 876432210 111 111122222222111 2222221 1112 244666664 222221
Q ss_pred --Eecccc---cCCCC----CCHHHHHHHHHHHHhhcCCccceEeec-c------------eecccCC-CCCC-CCCCCE
Q 010693 299 --LEETSL---VSRPV----LSYKEVKRRMAARLRHMGIRVKRVIED-E------------KCLIPMG-GPLP-VIPQSV 354 (503)
Q Consensus 299 --v~~~~~---~~~~~----~~~~~~~~~l~~~l~~~~~~~~~i~~~-~------------~~~~p~~-~~~~-~~~~~v 354 (503)
+..... ..... .+.++..+.+.+.+..........+.. . ....|+. .+.+ ...+++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (430)
T 3ihm_A 230 LVLENHIGSDLEVLAHTKYDDDPRAFLDLMLEKLGKHHPSVAERIDPAEFDLANSSLDILQGGVVPAFRDGHATLNNGKT 309 (430)
T ss_dssp EEEEECTTSSSGGGGTSCTTTCHHHHHHHHHHHHHHHCHHHHTTBCTTTCEESSSTTSEEEECCCCEEBCSEEECTTSCE
T ss_pred EEEEecCCCcHHHhccccCCCCHHHHHHHHHHHHHHhCccHHHHHhhchhccccCccceeecceeecccccccccCCCCE
Confidence 111100 00011 255545444444443321111111110 0 0122211 1111 256788
Q ss_pred EE-eccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcCCCCCCCchhhHHHH
Q 010693 355 MA-IGSTSGLVHPSTGYMVARTMALAPALADAIAECLGSTRMIRGRPLHQKVW 406 (503)
Q Consensus 355 ~l-iGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~~~~~~~l~~y~~~~ 406 (503)
++ +|||||.++|++|||++.|++||..||+.|... ++....+..|+...
T Consensus 310 ~ll~GDAah~~~p~~g~G~~~a~~da~~l~~~l~~~---~~~~~~~~~~~~~r 359 (430)
T 3ihm_A 310 IIGLGDIQATVDPVLGQGANMASYAAWILGEEILAH---SVYDLRFSEHLERR 359 (430)
T ss_dssp EEECGGGTEECCGGGCCHHHHHHHHHHHHHHHHHHC---SCCSHHHHHHHHHH
T ss_pred EEEecCccccCCCchhhhHHHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHH
Confidence 88 999999999999999999999999999999975 22335677775543
No 29
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=99.76 E-value=6.4e-18 Score=177.40 Aligned_cols=135 Identities=16% Similarity=0.240 Sum_probs=100.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchh---HhhhhcCchhhhhhccCceEEEecCCcc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWV---DEFEDIGLVDCLDKTWPMTCVFINDHKT 159 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~---~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (503)
...+||+||||||+|+++|+.|++ .|++|+|||+.+..+..+..+.+. ..+..+|+.+....
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~-~G~~V~liEk~~~~g~~~~~~~~~~~~~~l~~~g~~~~~~~-------------- 154 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELAL-LGARVVLVEKRIKFSRHNVLHLWPFTIHDLRALGAKKFYGR-------------- 154 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCSSCCCCCEEECCHHHHHHHHTTTHHHHCTT--------------
T ss_pred cCCCCEEEECccHHHHHHHHHHHH-CCCeEEEEEeccccCCCCcccCChhHHHHHHHcCCcccccc--------------
Confidence 356899999999999999999999 999999999987665443333332 23445554321100
Q ss_pred cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe---CCEEEEEe--C-CC--cEEEeceEEecCCCCcccc
Q 010693 160 KYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ---EFESSIVC--D-DG--NEIKASLIVDASGFASSFV 230 (503)
Q Consensus 160 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~---~~~~~v~~--~-~g--~~i~a~~vI~A~G~~s~vr 230 (503)
.....+..+++..+.+.|.+.+.+.|++++ +++|++++.+ ++.+.|.+ . +| .+++||+||+|+|.+|.++
T Consensus 155 -~~~~~~~~~~~~~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~v~~~~~~~g~~~~i~ad~VV~A~G~~S~~r 233 (497)
T 2bry_A 155 -FCTGTLDHISIRQLQLLLLKVALLLGVEIHWGVKFTGLQPPPRKGSGWRAQLQPNPPAQLASYEFDVLISAAGGKFVPE 233 (497)
T ss_dssp -TTCTTCCEEEHHHHHHHHHHHHHHTTCEEEESCEEEEEECCCSTTCCBEEEEESCCCHHHHTCCBSEEEECCCTTCCCT
T ss_pred -ccccccccCCHHHHHHHHHHHHHhCCCEEEeCCEEEEEEEecCCCCEEEEEEEECCCCCEEEEEcCEEEECCCCCcccc
Confidence 011123347788999999999999999999 9999999874 34566666 4 56 4699999999999999887
Q ss_pred ccc
Q 010693 231 EYD 233 (503)
Q Consensus 231 ~~~ 233 (503)
++.
T Consensus 234 ~~~ 236 (497)
T 2bry_A 234 GFT 236 (497)
T ss_dssp TCE
T ss_pred ccc
Confidence 653
No 30
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.75 E-value=1.2e-16 Score=158.93 Aligned_cols=278 Identities=12% Similarity=0.063 Sum_probs=151.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcc----------c---------chhHhhhhcCchhhhhh
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNY----------G---------VWVDEFEDIGLVDCLDK 145 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~----------g---------~~~~~l~~~~~~~~~~~ 145 (503)
++||+|||||++|+++|+.|++ +|++|+|||+.+..+..... + .+...++.+... ....
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~-~G~~V~vlE~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSRGSGGRMSSKRSDAGALDMGAQYFTARDRRFATAVKQWQAQ-GHVA 79 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCGGGCEEEETTEEEECSCCCBCCCSHHHHHHHHHHHHH-TSEE
T ss_pred CceEEEECCcHHHHHHHHHHHH-CCCcEEEEECCCCCcccceeEecCCCeEecCCCeEecCCHHHHHHHHHHHhC-CCee
Confidence 4799999999999999999999 99999999998654211100 0 011111111000 0111
Q ss_pred ccCceEEEecCCccccc-CC--Cccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEE-eceE
Q 010693 146 TWPMTCVFINDHKTKYL-DR--PYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIK-ASLI 219 (503)
Q Consensus 146 ~~~~~~~~~~~~~~~~~-~~--~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~-a~~v 219 (503)
.|............... .. .+.. .....+.+.|. .|++++ +++|++++.+++++.|++.+|+.+. ||+|
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-----~g~~i~~~~~v~~i~~~~~~~~v~~~~g~~~~~a~~v 154 (336)
T 1yvv_A 80 EWTPLLYNFHAGRLSPSPDEQVRWVGKPGMSAITRAMR-----GDMPVSFSCRITEVFRGEEHWNLLDAEGQNHGPFSHV 154 (336)
T ss_dssp EECCCEEEESSSBCCCCCTTSCEEEESSCTHHHHHHHH-----TTCCEECSCCEEEEEECSSCEEEEETTSCEEEEESEE
T ss_pred eccccceeccCcccccCCCCCccEEcCccHHHHHHHHH-----ccCcEEecCEEEEEEEeCCEEEEEeCCCcCccccCEE
Confidence 23333333222211100 11 1111 11233333332 288999 9999999998889999999988664 9999
Q ss_pred EecCCCCcccccccCC-------CCCccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCC-eEEEEe-
Q 010693 220 VDASGFASSFVEYDKP-------RNHGYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLP-TFLYAM- 290 (503)
Q Consensus 220 I~A~G~~s~vr~~~~~-------~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~-~~~~~~- 290 (503)
|+|+|..+.++..... ....+.....+.+.++.+ +......+ +..++ + .|++..
T Consensus 155 V~a~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~-------------~~~~~---~~~~l~~~~ 217 (336)
T 1yvv_A 155 IIATPAPQASTLLAAAPKLASVVAGVKMDPTWAVALAFETP-LQTPMQGC-------------FVQDS---PLDWLARNR 217 (336)
T ss_dssp EECSCHHHHGGGGTTCHHHHHHHTTCCEEEEEEEEEEESSC-CSCCCCEE-------------EECSS---SEEEEEEGG
T ss_pred EEcCCHHHHHHhhccCHHHHHHHhhcCccceeEEEEEecCC-CCCCCCeE-------------EeCCC---ceeEEEecC
Confidence 9999999877654221 112233223232333322 22111111 11222 2 233221
Q ss_pred --ecCCC----eEEEeccccc-CCCCCCHHHHHHHHHHHHhhc-CCccc--e--EeecceecccCCCCCC----CCCCCE
Q 010693 291 --PFDSN----LVFLEETSLV-SRPVLSYKEVKRRMAARLRHM-GIRVK--R--VIEDEKCLIPMGGPLP----VIPQSV 354 (503)
Q Consensus 291 --P~~~~----~~~v~~~~~~-~~~~~~~~~~~~~l~~~l~~~-~~~~~--~--i~~~~~~~~p~~~~~~----~~~~~v 354 (503)
|..++ .+|....... .....+.+++.+.+.+.+... +.... . ........+|.....+ ...+|+
T Consensus 218 ~~p~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~~~~~~~~rl 297 (336)
T 1yvv_A 218 SKPERDDTLDTWILHATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWGALSDADLGI 297 (336)
T ss_dssp GSTTCCCSSEEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCSCEEETTTTE
T ss_pred cCCCCCCCCcEEEEEeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCCeeecCCCCE
Confidence 33333 2222211111 123567788888887777653 43221 1 1111122234322211 145899
Q ss_pred EEeccCCCCcCCcccHHHHHHHHhHHHHHHHHHHHhcC
Q 010693 355 MAIGSTSGLVHPSTGYMVARTMALAPALADAIAECLGS 392 (503)
Q Consensus 355 ~liGDAa~~~~P~~G~G~~~al~~a~~lA~~l~~~l~~ 392 (503)
+++||+++. .|++.|+++|..+|+.|.+.++.
T Consensus 298 ~laGDa~~g------~gv~~a~~sg~~lA~~l~~~~~~ 329 (336)
T 1yvv_A 298 YVCGDWCLS------GRVEGAWLSGQEAARRLLEHLQL 329 (336)
T ss_dssp EECCGGGTT------SSHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEecCCCC------CCHHHHHHHHHHHHHHHHHHhhh
Confidence 999999963 49999999999999999988764
No 31
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=99.73 E-value=7.1e-17 Score=163.64 Aligned_cols=190 Identities=17% Similarity=0.111 Sum_probs=118.3
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc-cccccCCCCCccceeE
Q 010693 167 GRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS-FVEYDKPRNHGYQIAH 244 (503)
Q Consensus 167 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~-vr~~~~~~~~~~~~~~ 244 (503)
+.++...+.+.|.+.+.+.|++++ +++|+++..+++.+.|.+.+| +++||.||.|+|.++. +.+..+.. .......
T Consensus 159 ~~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~s~~l~~~~~~~-~~~~~~~ 236 (382)
T 1ryi_A 159 VHVEPYFVCKAYVKAAKMLGAEIFEHTPVLHVERDGEALFIKTPSG-DVWANHVVVASGVWSGMFFKQLGLN-NAFLPVK 236 (382)
T ss_dssp CBCCHHHHHHHHHHHHHHTTCEEETTCCCCEEECSSSSEEEEETTE-EEEEEEEEECCGGGTHHHHHHTTCC-CCCEEEE
T ss_pred eEEcHHHHHHHHHHHHHHCCCEEEcCCcEEEEEEECCEEEEEcCCc-eEEcCEEEECCChhHHHHHHhcCCC-Cceeccc
Confidence 357889999999999999999999 899999998877778888777 8999999999999875 54433322 2233344
Q ss_pred EEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccCC--CCCCHH---HHHHHH
Q 010693 245 GILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSR--PVLSYK---EVKRRM 319 (503)
Q Consensus 245 g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~~--~~~~~~---~~~~~l 319 (503)
|....+.........+++ .. +.|++|..++.+.++.+..... ...+.+ .+.+.+
T Consensus 237 g~~~~~~~~~~~~~~~~~---------------~~------~~~~~p~~~g~~~vG~~~~~~~~~~~~~~~~~~~l~~~~ 295 (382)
T 1ryi_A 237 GECLSVWNDDIPLTKTLY---------------HD------HCYIVPRKSGRLVVGATMKPGDWSETPDLGGLESVMKKA 295 (382)
T ss_dssp EEEEEEECCSSCCCSEEE---------------ET------TEEEEECTTSEEEEECCCEETCCCCSCCHHHHHHHHHHH
T ss_pred eEEEEECCCCCCccceEE---------------cC------CEEEEEcCCCeEEEeecccccCCCCCCCHHHHHHHHHHH
Confidence 554444322111111111 11 2788998888887776532221 122222 334444
Q ss_pred HHHHhhcCCccceEeecceecccCCCCCCCCCCCEEEeccCC-----CCcCCcccHHHHHHHHhHHHHHHHHH
Q 010693 320 AARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGSTS-----GLVHPSTGYMVARTMALAPALADAIA 387 (503)
Q Consensus 320 ~~~l~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~v~liGDAa-----~~~~P~~G~G~~~al~~a~~lA~~l~ 387 (503)
.+.++.+ ....+.....+..|+. .++..++|++. ....+++|.|+..|...|..+|+.|.
T Consensus 296 ~~~~p~l--~~~~~~~~w~g~~~~t------~d~~p~ig~~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 360 (382)
T 1ryi_A 296 KTMLPAI--QNMKVDRFWAGLRPGT------KDGKPYIGRHPEDSRILFAAGHFRNGILLAPATGALISDLIM 360 (382)
T ss_dssp HHHCGGG--GGSEEEEEEEEEEEEC------SSSCCEEEEETTEEEEEEEECCSSCTTTTHHHHHHHHHHHHT
T ss_pred HHhCCCc--CCCceeeEEEEecccC------CCCCcEeccCCCcCCEEEEEcCCcchHHHhHHHHHHHHHHHh
Confidence 4444443 1223444444555542 34566677653 22355778899988888877777764
No 32
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=99.69 E-value=3.3e-15 Score=151.31 Aligned_cols=194 Identities=12% Similarity=0.059 Sum_probs=113.7
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEeCCCcEEEeceEEecCCCCc-ccccccCCCC-Ccccee
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVCDDGNEIKASLIVDASGFAS-SFVEYDKPRN-HGYQIA 243 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vI~A~G~~s-~vr~~~~~~~-~~~~~~ 243 (503)
.++...+.+.|.+.+++.|++++ +++|++++.+++.+. |.+.+| +++||.||.|+|.++ .+.+..+... ......
T Consensus 145 ~~~~~~l~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~v~gv~~~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~~~~ 223 (382)
T 1y56_B 145 KADPFEATTAFAVKAKEYGAKLLEYTEVKGFLIENNEIKGVKTNKG-IIKTGIVVNATNAWANLINAMAGIKTKIPIEPY 223 (382)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTE-EEECSEEEECCGGGHHHHHHHHTCCSCCCCEEE
T ss_pred eECHHHHHHHHHHHHHHCCCEEECCceEEEEEEECCEEEEEEECCc-EEECCEEEECcchhHHHHHHHcCCCcCcCCCee
Confidence 47888999999999999999999 899999998888777 888777 799999999999987 4444333221 223334
Q ss_pred EEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEec-c-cccCC--CCCCHH---HHH
Q 010693 244 HGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEE-T-SLVSR--PVLSYK---EVK 316 (503)
Q Consensus 244 ~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~-~-~~~~~--~~~~~~---~~~ 316 (503)
.|....++..........+++. +. ..+|+.|..++ +.++. + ..... ...+.+ .+.
T Consensus 224 ~g~~~~~~~~~~~~~~~~~~~~-------------~~----~~~y~~p~~~g-~~iG~~~~~~~~~~~~~~~~~~~~~l~ 285 (382)
T 1y56_B 224 KHQAVITQPIKRGTINPMVISF-------------KY----GHAYLTQTFHG-GIIGGIGYEIGPTYDLTPTYEFLREVS 285 (382)
T ss_dssp EEEEEEECCCSTTSSCSEEEES-------------TT----TTEEEECCSSS-CCEEECSCCBSSCCCCCCCHHHHHHHH
T ss_pred EeEEEEEccCCcccCCCeEEec-------------CC----CeEEEEEeCCe-EEEecCCCCCCCCCCCCCCHHHHHHHH
Confidence 4444333321111110111111 10 13778888877 55653 2 11111 122322 333
Q ss_pred HHHHHHHhhcCCccceEeecceecccCCCCCCCCCCCEEEeccCC---CC--cCCcccHHHHHHHHhHHHHHHHHHH
Q 010693 317 RRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGSTS---GL--VHPSTGYMVARTMALAPALADAIAE 388 (503)
Q Consensus 317 ~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~v~liGDAa---~~--~~P~~G~G~~~al~~a~~lA~~l~~ 388 (503)
+.+.+.++.+ ...++.....+.+|+. .++..++|... +. ...++|.|+..+...|..+|+.|..
T Consensus 286 ~~~~~~~p~l--~~~~~~~~~~g~r~~t------~d~~p~ig~~~~~~~~~~~~G~~g~G~~~a~~~g~~la~~i~~ 354 (382)
T 1y56_B 286 YYFTKIIPAL--KNLLILRTWAGYYAKT------PDSNPAIGRIEELNDYYIAAGFSGHGFMMAPAVGEMVAELITK 354 (382)
T ss_dssp HHHHHHCGGG--GGSEEEEEEEEEEEEC------TTSCCEEEEESSSBTEEEEECCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCc--CCCCceEEEEeccccC------CCCCcEeccCCCCCCEEEEEecCcchHhhhHHHHHHHHHHHhC
Confidence 4444444433 2234455555666653 34455555543 11 1235678999888888887777764
No 33
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=99.65 E-value=2.1e-14 Score=156.42 Aligned_cols=81 Identities=14% Similarity=0.149 Sum_probs=64.6
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc-cccccCCCCCccceeEE
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS-FVEYDKPRNHGYQIAHG 245 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~-vr~~~~~~~~~~~~~~g 245 (503)
.++...+...|.+.+++.|++++ +++|+++..+++++.|.+.+|.+++||.||.|+|.++. +.+.. ........|
T Consensus 413 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p~rG 489 (676)
T 3ps9_A 413 WLCPAELTRNVLELAQQQGLQIYYQYQLQNFSRKDDCWLLNFAGDQQATHSVVVLANGHQISRFSQTS---TLPVYSVAG 489 (676)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECCGGGGGCSTTTT---TCSCEEEEE
T ss_pred eeCHHHHHHHHHHHHHhCCCEEEeCCeeeEEEEeCCeEEEEECCCCEEECCEEEECCCcchhcccccc---CCcceeecC
Confidence 47788999999999999999999 99999999999999999988889999999999998875 33221 223444556
Q ss_pred EEEEec
Q 010693 246 ILAEVE 251 (503)
Q Consensus 246 ~~~~~~ 251 (503)
....++
T Consensus 490 q~~~~~ 495 (676)
T 3ps9_A 490 QVSHIP 495 (676)
T ss_dssp EEEEEE
T ss_pred EEEEEC
Confidence 655554
No 34
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=99.64 E-value=1.5e-14 Score=145.28 Aligned_cols=200 Identities=10% Similarity=0.045 Sum_probs=111.0
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE-EEEEeCCC--cEEEeceEEecCCCCc-cccccc-CCC---CC
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE-SSIVCDDG--NEIKASLIVDASGFAS-SFVEYD-KPR---NH 238 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g--~~i~a~~vI~A~G~~s-~vr~~~-~~~---~~ 238 (503)
.++...+.+.|.+.+++.|++++ +++|+++..++++ +.|.+.+| .+++||.||.|+|.+| .+.+.. +.. ..
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~a~~VV~A~G~~s~~l~~~~~g~~~~~~~ 225 (369)
T 3dme_A 146 IVDSHALMLAYQGDAESDGAQLVFHTPLIAGRVRPEGGFELDFGGAEPMTLSCRVLINAAGLHAPGLARRIEGIPRDSIP 225 (369)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSSEEEEECTTSCEEEEEEEEEECCGGGHHHHHHTEETSCGGGSC
T ss_pred EECHHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCceEEEEECCCceeEEEeCEEEECCCcchHHHHHHhcCCCccccc
Confidence 47788999999999999999999 9999999988765 88888887 3799999999999987 444433 322 22
Q ss_pred ccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEeccccc---CCCCCCH---
Q 010693 239 GYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLV---SRPVLSY--- 312 (503)
Q Consensus 239 ~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~---~~~~~~~--- 312 (503)
......|....+..+ .......+. ... .++ .+ +++.+..++.++++.+... .....+.
T Consensus 226 ~i~p~rG~~~~~~~~-~~~~~~~~~-~p~----------~~~---~~-~~~~~~~~g~~~iG~t~e~~~~~~~~~~~~~~ 289 (369)
T 3dme_A 226 PEYLCKGSYFTLAGR-APFSRLIYP-VPQ----------HAG---LG-VHLTLDLGGQAKFGPDTEWIATEDYTLDPRRA 289 (369)
T ss_dssp CCEEEEEEEEECSSS-CSCSSEEEE-CTT----------CSS---CC-CCEEECTTSCEEECCCCEEESSCCCCCCGGGG
T ss_pred eeeecceEEEEECCC-CccCceeec-CCC----------CCC---ce-EEEeCccCCcEEECCCcccccccccccCHHHH
Confidence 344456665555432 111122111 100 011 11 2233333445555443221 1122222
Q ss_pred HHHHHHHHHHHhhcCCccceEeecceecccCCCCCCCCCCCEEEe-ccC----CCCcCC--cccHHHHHHHHhHHHHHHH
Q 010693 313 KEVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAI-GST----SGLVHP--STGYMVARTMALAPALADA 385 (503)
Q Consensus 313 ~~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~v~li-GDA----a~~~~P--~~G~G~~~al~~a~~lA~~ 385 (503)
+.+.+.+.++++.+ ...++.....+..|+... +...++...+ |.. .+.+.- +.|.|+..+...|..+|+.
T Consensus 290 ~~l~~~~~~~~P~l--~~~~v~~~w~G~Rp~~~~-~~~~d~~p~i~g~~~~~~~~l~~~~G~~~~G~t~ap~~a~~~a~~ 366 (369)
T 3dme_A 290 DVFYAAVRSYWPAL--PDGALAPGYTGIRPKISG-PHEPAADFAIAGPASHGVAGLVNLYGIESPGLTASLAIAEETLAR 366 (369)
T ss_dssp GGHHHHHHTTCTTC--CTTCCEEEEEEEEEESSC-TTSCCCCCEEECHHHHCCTTEEEEECCCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCC--ChhhceecceeccccccC-CCCCcCCeEEecccccCCCCEEEEeCCCCchHhccHHHHHHHHHH
Confidence 34455555555543 223445556677776321 1112223333 542 122221 3455888777777777766
Q ss_pred H
Q 010693 386 I 386 (503)
Q Consensus 386 l 386 (503)
|
T Consensus 367 i 367 (369)
T 3dme_A 367 L 367 (369)
T ss_dssp H
T ss_pred h
Confidence 5
No 35
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=99.64 E-value=8.7e-15 Score=149.13 Aligned_cols=64 Identities=17% Similarity=0.152 Sum_probs=53.9
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc-ccccc
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS-SFVEY 232 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s-~vr~~ 232 (503)
.++...+.+.|.+.+.+.|++++ +++|++++.+++.+.|.+.+| +++||.||+|+|.++ .+++.
T Consensus 149 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~v~v~t~~g-~i~a~~VV~A~G~~s~~l~~~ 214 (397)
T 2oln_A 149 TIDVRGTLAALFTLAQAAGATLRAGETVTELVPDADGVSVTTDRG-TYRAGKVVLACGPYTNDLLEP 214 (397)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEEESCCEEEEEEETTEEEEEESSC-EEEEEEEEECCGGGHHHHHGG
T ss_pred EEcHHHHHHHHHHHHHHcCCEEECCCEEEEEEEcCCeEEEEECCC-EEEcCEEEEcCCcChHHHhhh
Confidence 46677889999999999999999 899999998888888877665 799999999999874 45443
No 36
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=99.64 E-value=5.9e-15 Score=149.12 Aligned_cols=192 Identities=14% Similarity=0.166 Sum_probs=110.2
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc-ccccccCCCCCccceeEE
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS-SFVEYDKPRNHGYQIAHG 245 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s-~vr~~~~~~~~~~~~~~g 245 (503)
.++...+...|.+.+++.|++++ +++|+++..+++.+.|.+.+| +++||.||.|+|.+| .+.+..+..........|
T Consensus 150 ~~~~~~~~~~l~~~a~~~Gv~i~~~~~V~~i~~~~~~~~V~t~~g-~i~a~~VV~A~G~~s~~l~~~~g~~~~~~~p~rg 228 (381)
T 3nyc_A 150 DIDTDALHQGYLRGIRRNQGQVLCNHEALEIRRVDGAWEVRCDAG-SYRAAVLVNAAGAWCDAIAGLAGVRPLGLQPKRR 228 (381)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEESSCCCCEEEEETTEEEEECSSE-EEEESEEEECCGGGHHHHHHHHTCCCCCCEEEEE
T ss_pred eECHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEeCCeEEEEeCCC-EEEcCEEEECCChhHHHHHHHhCCCCCceeeeEE
Confidence 47889999999999999999999 999999999888888888877 899999999999887 344433332223444555
Q ss_pred EEEEecCCC-CCCCc-eEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccC----CCCCCHHHHHHHH
Q 010693 246 ILAEVESHP-FDLDK-MVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVS----RPVLSYKEVKRRM 319 (503)
Q Consensus 246 ~~~~~~~~~-~~~~~-~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~----~~~~~~~~~~~~l 319 (503)
....++.+. ..... ..+++ .++ .+|+.|.. +.++++.+.... ....+...+. .+
T Consensus 229 ~~~~~~~~~~~~~~~~p~~~~-------------~~~-----~~y~~p~~-g~~~ig~~~~~~~~~~~~~~~~~~~~-~~ 288 (381)
T 3nyc_A 229 SAFIFAPPPGIDCHDWPMLVS-------------LDE-----SFYLKPDA-GMLLGSPANADPVEAHDVQPEQLDIA-TG 288 (381)
T ss_dssp EEEEECCCTTCCCTTCCEEEE-------------TTS-----SCEEEEET-TEEEEECCCCEECCSSCCCCCHHHHH-HH
T ss_pred EEEEECCCcCCCcCccceEEe-------------CCC-----CEEEEeCC-CcEEEeCCcCCCCCcccCCCChHHHH-HH
Confidence 555544322 11111 11111 011 25778887 777776554321 1112222332 22
Q ss_pred HHHHhhc-CCccceEeecceecccCCCCCCCCCCCEEEeccCCCC---c--CCcccHHHHHHHHhHHHHHHHH
Q 010693 320 AARLRHM-GIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGSTSGL---V--HPSTGYMVARTMALAPALADAI 386 (503)
Q Consensus 320 ~~~l~~~-~~~~~~i~~~~~~~~p~~~~~~~~~~~v~liGDAa~~---~--~P~~G~G~~~al~~a~~lA~~l 386 (503)
.+.+..+ .+...++.....+.+|+. .++..++|...+. + ..++|.|+..+...|..+|+.|
T Consensus 289 ~~~~~~~~~l~~~~~~~~w~G~r~~t------~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la~~i 355 (381)
T 3nyc_A 289 MYLIEEATTLTIRRPEHTWAGLRSFV------ADGDLVAGYAANAEGFFWVAAQGGYGIQTSAAMGEASAALI 355 (381)
T ss_dssp HHHHHHHBSCCCCCCSEEEEEEEEEC------TTSCCEEEECTTSTTEEEEECCTTCTTTTHHHHHHHHHHHH
T ss_pred HHHHHhcCCCcccceeeeeEEccccC------CCCCceecCCCCCCCeEEEEcCCChhHhhCHHHHHHHHHHH
Confidence 3333322 222223444445555553 3455556653211 1 1134567776665555555554
No 37
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=99.63 E-value=1.1e-14 Score=147.87 Aligned_cols=193 Identities=11% Similarity=0.058 Sum_probs=110.4
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc-cccccCCCCCccceeEE
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS-FVEYDKPRNHGYQIAHG 245 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~-vr~~~~~~~~~~~~~~g 245 (503)
.++...+.+.|.+.+++.|++++ +++|++++.+++++.|.+.+| +++||.||.|+|.++. +....+. ........|
T Consensus 146 ~~~~~~~~~~l~~~~~~~Gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~a~~vV~A~G~~~~~l~~~~g~-~~pl~~~rg 223 (389)
T 2gf3_A 146 VLFSENCIRAYRELAEARGAKVLTHTRVEDFDISPDSVKIETANG-SYTADKLIVSMGAWNSKLLSKLNL-DIPLQPYRQ 223 (389)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSCEEEEETTE-EEEEEEEEECCGGGHHHHGGGGTE-ECCCEEEEE
T ss_pred EEeHHHHHHHHHHHHHHCCCEEEcCcEEEEEEecCCeEEEEeCCC-EEEeCEEEEecCccHHHHhhhhcc-CCceEEEEE
Confidence 46778999999999999999999 899999998877788887766 7999999999998864 3322221 112334455
Q ss_pred EEEEecCCC--CC--CCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCC-eEEEecccc-----cC--CCCC--C
Q 010693 246 ILAEVESHP--FD--LDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSN-LVFLEETSL-----VS--RPVL--S 311 (503)
Q Consensus 246 ~~~~~~~~~--~~--~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~-~~~v~~~~~-----~~--~~~~--~ 311 (503)
....++... +. .....+. .... ...+|++|..++ .+.++.+.. .. .... +
T Consensus 224 ~~~~~~~~~~~~~~~~~~p~~~-------------~~~~---~~~~y~~p~~~g~~~~iG~~~~~~~~~~~~~~~~~~~~ 287 (389)
T 2gf3_A 224 VVGFFESDESKYSNDIDFPGFM-------------VEVP---NGIYYGFPSFGGCGLKLGYHTFGQKIDPDTINREFGVY 287 (389)
T ss_dssp EEEEECCCHHHHBGGGTCCEEE-------------EEET---TEEEEEECBSTTCCEEEEESSCCEECCTTTCCCCTTSS
T ss_pred EEEEEecCcccccccccCCEEE-------------EeCC---CCcEEEcCCCCCCcEEEEEcCCCCccCcccccCccCCC
Confidence 544443221 00 0001111 0111 236888998886 777664421 00 1112 3
Q ss_pred HH---HHHHHHHHHHhhcCCccceEeecceecccCCCCCCCCCCCEEEeccCCC---Cc--CCcccHHHHHHHHhHHHHH
Q 010693 312 YK---EVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGSTSG---LV--HPSTGYMVARTMALAPALA 383 (503)
Q Consensus 312 ~~---~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~v~liGDAa~---~~--~P~~G~G~~~al~~a~~lA 383 (503)
.+ .+.+.+.++++.+.. .+.....+.+|+. .++..++|...+ .+ .-++|.|+..+...|..+|
T Consensus 288 ~~~~~~l~~~~~~~~P~l~~---~~~~~w~g~r~~t------~D~~p~ig~~~~~~~l~~a~G~~g~G~~~ap~~g~~la 358 (389)
T 2gf3_A 288 PEDESNLRAFLEEYMPGANG---ELKRGAVCMYTKT------LDEHFIIDLHPEHSNVVIAAGFSGHGFKFSSGVGEVLS 358 (389)
T ss_dssp HHHHHHHHHHHHHHCGGGCS---CEEEEEEEEEEEC------TTSCCEEEEETTEEEEEEEECCTTCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCC---CceEEEEEEeccC------CCCCeEEccCCCCCCEEEEECCccccccccHHHHHHHH
Confidence 33 344444555554422 3444445555543 345566665321 11 1234567776666666666
Q ss_pred HHHH
Q 010693 384 DAIA 387 (503)
Q Consensus 384 ~~l~ 387 (503)
+.|.
T Consensus 359 ~~i~ 362 (389)
T 2gf3_A 359 QLAL 362 (389)
T ss_dssp HHHH
T ss_pred HHHc
Confidence 6554
No 38
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=99.63 E-value=6e-14 Score=147.45 Aligned_cols=204 Identities=10% Similarity=0.108 Sum_probs=122.9
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC---CCc--EEEeceEEecCCCCcc-ccc--ccCCCCC
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD---DGN--EIKASLIVDASGFASS-FVE--YDKPRNH 238 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~--~i~a~~vI~A~G~~s~-vr~--~~~~~~~ 238 (503)
+++...+...|.+.+.+.|++++ +++|+++..+++.+.|.+. +|+ +++||.||.|+|.++. +.+ .......
T Consensus 145 ~v~~~~l~~~l~~~a~~~Gv~i~~~~~V~~l~~~~~~~~V~~~d~~~G~~~~i~A~~VV~AtG~~s~~l~~~~l~~~~~~ 224 (501)
T 2qcu_A 145 WVDDARLVLANAQMVVRKGGEVLTRTRATSARRENGLWIVEAEDIDTGKKYSWQARGLVNATGPWVKQFFDDGMHLPSPY 224 (501)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTTCCEEEEEESCEEECCGGGHHHHHHHHTCCCCSS
T ss_pred EEcHHHHHHHHHHHHHHcCCEEEcCcEEEEEEEeCCEEEEEEEECCCCCEEEEECCEEEECCChhHHHHHHHhccCCccc
Confidence 47899999999999999999999 8999999988876777763 565 7999999999999874 333 2211112
Q ss_pred ccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccC-----CCCCCHH
Q 010693 239 GYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVS-----RPVLSYK 313 (503)
Q Consensus 239 ~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~-----~~~~~~~ 313 (503)
......|....++. .+......++. . ++| ..+|++|..++..+++.+.... ....+.+
T Consensus 225 ~i~p~rG~~~~~~~-~~~~~~~~~~~--~----------~dg----~~~~~~P~~~g~~~iG~t~~~~~~~~~~~~~~~~ 287 (501)
T 2qcu_A 225 GIRLIKGSHIVVPR-VHTQKQAYILQ--N----------EDK----RIVFVIPWMDEFSIIGTTDVEYKGDPKAVKIEES 287 (501)
T ss_dssp CBCCEEEEEEEEEC-SSSCSCEEEEE--C----------TTS----CEEEEEEETTTEEEEECCCEECCSCGGGCCCCHH
T ss_pred ccccceeEEEEECC-CCCCceEEEee--c----------CCC----CEEEEEEcCCCcEEEcCCCCCCCCCcCCCCCCHH
Confidence 34445566555542 23322222221 1 122 4689999998888887764321 1223333
Q ss_pred ---HHHHHHHHHHhhcCCccceEeecceecccCCCC-CCC----CCCCEEE--eccCCCCcCCcccHHHHHHHHhHHHHH
Q 010693 314 ---EVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGP-LPV----IPQSVMA--IGSTSGLVHPSTGYMVARTMALAPALA 383 (503)
Q Consensus 314 ---~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~-~~~----~~~~v~l--iGDAa~~~~P~~G~G~~~al~~a~~lA 383 (503)
.+.+.+.++++ ..+....+.....+..|+... .|. ..+.++. .++..+.+-..+|.|+..+-.-|..++
T Consensus 288 ~~~~l~~~~~~~~p-~~l~~~~v~~~~aG~Rp~~~d~~p~~~~~~~~~~i~~~~~~~~~gl~~i~Gg~~t~~~~~Ae~~~ 366 (501)
T 2qcu_A 288 EINYLLNVYNTHFK-KQLSRDDIVWTYSGVRPLCDDESDSPQAITRDYTLDIHDENGKAPLLSVFGGKLTTYRKLAEHAL 366 (501)
T ss_dssp HHHHHHHHHHHHBS-SCCCGGGCCEEEEEEECCBCCCCSSGGGSCCCCEEEEEEETTEEEEEEEECCCGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CCCCcccEEEEEEEEeeecCCCCCccccCcCceEEEecccCCCCCeEEEeCccccchHHHHHHHH
Confidence 33444455554 123334455666678887532 121 3355555 455544455566767665555555555
Q ss_pred HHHHHH
Q 010693 384 DAIAEC 389 (503)
Q Consensus 384 ~~l~~~ 389 (503)
+.+.+.
T Consensus 367 ~~~~~~ 372 (501)
T 2qcu_A 367 EKLTPY 372 (501)
T ss_dssp HHHGGG
T ss_pred HHHHHh
Confidence 555444
No 39
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=99.63 E-value=1.8e-14 Score=157.25 Aligned_cols=81 Identities=10% Similarity=0.174 Sum_probs=63.0
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCc-EEEeceEEecCCCCcc-cccccCCCCCccceeE
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGN-EIKASLIVDASGFASS-FVEYDKPRNHGYQIAH 244 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~-~i~a~~vI~A~G~~s~-vr~~~~~~~~~~~~~~ 244 (503)
.++...+...|.+.+++.|++++ +++|+++..+++++.|.+.+|. +++||.||.|+|.++. +.+.. ........
T Consensus 408 ~v~p~~l~~aL~~~a~~~Gv~i~~~t~V~~l~~~~~~v~V~t~~G~~~i~Ad~VVlAtG~~s~~l~~~~---~lpl~p~r 484 (689)
T 3pvc_A 408 WLCPSDLTHALMMLAQQNGMTCHYQHELQRLKRIDSQWQLTFGQSQAAKHHATVILATGHRLPEWEQTH---HLPLSAVR 484 (689)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEESCCEEEEEECSSSEEEEEC-CCCCEEESEEEECCGGGTTCSTTTT---TSCCEEEE
T ss_pred EECHHHHHHHHHHHHHhCCCEEEeCCeEeEEEEeCCeEEEEeCCCcEEEECCEEEECCCcchhcccccc---CCcccccc
Confidence 47788999999999999999999 9999999998888899998887 8999999999998874 32221 22344455
Q ss_pred EEEEEec
Q 010693 245 GILAEVE 251 (503)
Q Consensus 245 g~~~~~~ 251 (503)
|....++
T Consensus 485 Gq~~~~~ 491 (689)
T 3pvc_A 485 GQVSHIP 491 (689)
T ss_dssp EEEEEEE
T ss_pred CcEEEEC
Confidence 6655554
No 40
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=99.62 E-value=1.1e-14 Score=148.47 Aligned_cols=191 Identities=12% Similarity=-0.009 Sum_probs=109.4
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE-EEEEeCCCcEEEeceEEecCCCCc-ccccccCCCCCccceeE
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE-SSIVCDDGNEIKASLIVDASGFAS-SFVEYDKPRNHGYQIAH 244 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g~~i~a~~vI~A~G~~s-~vr~~~~~~~~~~~~~~ 244 (503)
.++...+.+.|.+.+++.|++++ +++|+++..+++. +.|.+.+| +++||.||.|+|.++ .+++..+... ......
T Consensus 170 ~~~~~~~~~~l~~~~~~~g~~i~~~~~v~~i~~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~~l~~~~g~~~-~~~~~~ 247 (405)
T 2gag_B 170 IAKHDHVAWAFARKANEMGVDIIQNCEVTGFIKDGEKVTGVKTTRG-TIHAGKVALAGAGHSSVLAEMAGFEL-PIQSHP 247 (405)
T ss_dssp BCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEETTC-CEEEEEEEECCGGGHHHHHHHHTCCC-CEEEEE
T ss_pred cCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEeCCEEEEEEeCCc-eEECCEEEECCchhHHHHHHHcCCCC-Cccccc
Confidence 46778899999999999999999 8999999987664 56777777 799999999999887 5555433322 222223
Q ss_pred EEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEeccccc-C-C-CCCCH---HHHHHH
Q 010693 245 GILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLV-S-R-PVLSY---KEVKRR 318 (503)
Q Consensus 245 g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~-~-~-~~~~~---~~~~~~ 318 (503)
+.....+........+ +++ .+ ..+|+.|..++.++++.+... . . ...+. +.+.+.
T Consensus 248 ~~~~~~~~~~~~~~~~-~~~--------------~~----~~~y~~p~~~g~~~ig~~~~~~~~~~~~~~~~~~~~l~~~ 308 (405)
T 2gag_B 248 LQALVSELFEPVHPTV-VMS--------------NH----IHVYVSQAHKGELVMGAGIDSYNGYGQRGAFHVIQEQMAA 308 (405)
T ss_dssp EEEEEEEEBCSCCCSE-EEE--------------TT----TTEEEEECTTSEEEEEEEECSSCCCSSCCCTHHHHHHHHH
T ss_pred eeEEEecCCccccCce-EEe--------------CC----CcEEEEEcCCCcEEEEeccCCCCccccCCCHHHHHHHHHH
Confidence 3322222100001111 111 11 237788888887777654321 1 1 11222 233444
Q ss_pred HHHHHhhcCCccceEeecceecccCCCCCCCCCCCEEEeccCC--CCc--CCcccHHHHHHHHhHHHHHHHHH
Q 010693 319 MAARLRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGSTS--GLV--HPSTGYMVARTMALAPALADAIA 387 (503)
Q Consensus 319 l~~~l~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~v~liGDAa--~~~--~P~~G~G~~~al~~a~~lA~~l~ 387 (503)
+.+.++.+ ....+.....+.+|+ ..++..++|+.. +.+ ..++|.|+..|...|..+|+.|.
T Consensus 309 ~~~~~p~l--~~~~~~~~w~g~~~~------t~d~~p~ig~~~~~~l~~~~G~~g~G~~~a~~~g~~la~~i~ 373 (405)
T 2gag_B 309 AVELFPIF--ARAHVLRTWGGIVDT------TMDASPIISKTPIQNLYVNCGWGTGGFKGTPGAGFTLAHTIA 373 (405)
T ss_dssp HHHHCGGG--GGCEECEEEEEEEEE------ETTSCCEEEECSSBTEEEEECCGGGCSTTHHHHHHHHHHHHH
T ss_pred HHHhCCcc--ccCCcceEEeecccc------CCCCCCEecccCCCCEEEEecCCCchhhHHHHHHHHHHHHHh
Confidence 44444433 122344444455554 356777888864 222 22345677766666666666554
No 41
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=99.61 E-value=3.9e-14 Score=150.69 Aligned_cols=206 Identities=18% Similarity=0.260 Sum_probs=128.2
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEeCC---C--cEEEeceEEecCCCCc-ccccccCCC-CC
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVCDD---G--NEIKASLIVDASGFAS-SFVEYDKPR-NH 238 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~---g--~~i~a~~vI~A~G~~s-~vr~~~~~~-~~ 238 (503)
.++...+...|.+.+.+.|++++ +++|+++..+++++ .|.+.+ | .+++|+.||.|+|.++ .+++..+.. ..
T Consensus 166 ~vd~~~l~~~L~~~a~~~G~~i~~~~~V~~l~~~~g~v~gV~~~d~~tg~~~~i~A~~VV~AaG~~s~~l~~~~g~~~~~ 245 (561)
T 3da1_A 166 RTDDARLTLEIMKEAVARGAVALNYMKVESFIYDQGKVVGVVAKDRLTDTTHTIYAKKVVNAAGPWVDTLREKDRSKHGK 245 (561)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCGGGHHHHHHTTTCCCSS
T ss_pred eEcHHHHHHHHHHHHHHcCCEEEcCCEEEEEEEcCCeEEEEEEEEcCCCceEEEECCEEEECCCcchHHHHHhcCCCCCc
Confidence 47788999999999999999999 89999999988764 355543 3 3799999999999987 566554443 23
Q ss_pred ccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEeccccc-----CCCCCCHH
Q 010693 239 GYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLV-----SRPVLSYK 313 (503)
Q Consensus 239 ~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~-----~~~~~~~~ 313 (503)
......|....++.........+++... ++| .++|++|. ++.+.++.|... .....+.+
T Consensus 246 ~v~p~kG~~lvl~~~~~~~~~~~~~~~~-----------~dg----r~v~~iP~-~g~~~iGtT~~~~~~~~~~~~~t~~ 309 (561)
T 3da1_A 246 YLKLSKGVHLVVDQSRFPLRQAVYFDTE-----------SDG----RMIFAIPR-EGKTYIGTTDTFYDKDIASPRMTVE 309 (561)
T ss_dssp EEEEEEEEEEEEEGGGSCCSSEEEECCS-----------SSC----CCEEEEEE-TTEEEECCCCEEECSCTTCCCCCHH
T ss_pred eEEeccEEEEEECCccCCCceEEEeccC-----------CCC----cEEEEEec-CCCEEEcCCCCccCCCcCCCCCCHH
Confidence 4555667766665433333333332110 133 35788999 667777776531 12333444
Q ss_pred H---HHHHHHHHHhhcCCccceEeecceecccCCCC---CC--CCCCCEEEeccCCCCcCCcccHHHHHHHHhHHHHHHH
Q 010693 314 E---VKRRMAARLRHMGIRVKRVIEDEKCLIPMGGP---LP--VIPQSVMAIGSTSGLVHPSTGYMVARTMALAPALADA 385 (503)
Q Consensus 314 ~---~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~---~~--~~~~~v~liGDAa~~~~P~~G~G~~~al~~a~~lA~~ 385 (503)
+ +.+.+..+++.+.+....++....++.|+... .+ ...+.++..+ ..+.++-++|. +.+...-|..+.+.
T Consensus 310 ~i~~ll~~~~~~~P~l~~~~~~v~~~~aGlRPl~~~~~~~~~~~sR~~~i~~~-~~gli~i~Ggk-~Tt~r~mAe~~~d~ 387 (561)
T 3da1_A 310 DRDYILAAANYMFPSLRLTADDVESSWAGLRPLIHEEGKKASEISRKDEIFFS-DSGLISIAGGK-LTGYRKMAERTVDA 387 (561)
T ss_dssp HHHHHHHHHHHHCTTCCCCTTTEEEEEEEEEEEEEC-----------CCEEEC-SSCCEEECCCC-STTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCChhhEEEEeEEeccccCCCCCCccccccceEEEec-CCCeEEEeCCh-hhhHHHHHHHHHHH
Confidence 3 44455566665544455677777788886311 11 1233444444 35666666565 66666667777777
Q ss_pred HHHHhc
Q 010693 386 IAECLG 391 (503)
Q Consensus 386 l~~~l~ 391 (503)
+.+.+.
T Consensus 388 ~~~~~~ 393 (561)
T 3da1_A 388 VAQGLN 393 (561)
T ss_dssp HHHHHT
T ss_pred HHHhcC
Confidence 777764
No 42
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=99.56 E-value=2.3e-13 Score=140.43 Aligned_cols=62 Identities=18% Similarity=0.170 Sum_probs=56.0
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-Ee---EEEEEEEeCCEEE-EEeCCCcEEEeceEEecCCCCcc
Q 010693 167 GRVSRNILKTKLLENCVSNGVKFH-KA---KVWHVNHQEFESS-IVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 167 ~~v~r~~l~~~L~~~~~~~gv~~~-~~---~v~~i~~~~~~~~-v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
++++...+...|.+.+++.|++++ ++ +|+++..+++.+. |++.+|++++||.||.|+|.+|.
T Consensus 156 g~~~~~~~~~~L~~~a~~~Gv~i~~~t~~~~V~~i~~~~~~v~gV~t~~G~~i~Ad~VV~AtG~~s~ 222 (438)
T 3dje_A 156 GWAHARNALVAAAREAQRMGVKFVTGTPQGRVVTLIFENNDVKGAVTADGKIWRAERTFLCAGASAG 222 (438)
T ss_dssp EEECHHHHHHHHHHHHHHTTCEEEESTTTTCEEEEEEETTEEEEEEETTTEEEECSEEEECCGGGGG
T ss_pred EEecHHHHHHHHHHHHHhcCCEEEeCCcCceEEEEEecCCeEEEEEECCCCEEECCEEEECCCCChh
Confidence 457788999999999999999999 88 9999999888887 89999888999999999998874
No 43
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=99.56 E-value=1e-13 Score=139.73 Aligned_cols=60 Identities=15% Similarity=0.148 Sum_probs=52.9
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
+++...+.+.|.+.+++.|++++ +++|++++.+++.+.|.+.+| +++||.||.|+|.++.
T Consensus 145 ~~~~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~a~~vV~a~G~~s~ 205 (372)
T 2uzz_A 145 FLRSELAIKTWIQLAKEAGCAQLFNCPVTAIRHDDDGVTIETADG-EYQAKKAIVCAGTWVK 205 (372)
T ss_dssp EEEHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-EEEEEEEEECCGGGGG
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEcCCEEEEEEEcCCEEEEEECCC-eEEcCEEEEcCCccHH
Confidence 46778899999999999999999 899999998877788888777 5999999999998773
No 44
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=99.50 E-value=4e-13 Score=137.32 Aligned_cols=146 Identities=16% Similarity=0.185 Sum_probs=86.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCC--ccc--chhHh--------h--hhcCc-hhhh---
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPN--NYG--VWVDE--------F--EDIGL-VDCL--- 143 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~--~~g--~~~~~--------l--~~~~~-~~~~--- 143 (503)
..+||+|||||++|+++|+.|++ + |++|+|||+........ ..| .|... + ..+.+ ....
T Consensus 35 ~~~dVvIIGaGi~Gls~A~~La~-~~pG~~V~vlE~~~~~~~~s~~~~g~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 113 (405)
T 3c4n_A 35 EAFDIVVIGAGRMGAACAFYLRQ-LAPGRSLLLVEEGGLPNEEGATILAPGVWTAQDIPAGQEAQAEWTREQLLGALGSG 113 (405)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSCSSCTTSHHHHCCCEECGGGCCTTCHHHHHHHHHHHHTGGGSS
T ss_pred CcCCEEEECCcHHHHHHHHHHHh-cCCCCeEEEEeCCCCCCcchhccCCcceeecccCCchHHHHHHHHHHHHHHHhCCC
Confidence 35999999999999999999999 8 99999999875332111 112 11110 0 00000 0000
Q ss_pred -hhcc--CceEEEecCC---------------------------cccccCCCccccCHHHHHHHHHHHHHhCCcEEE-Ee
Q 010693 144 -DKTW--PMTCVFINDH---------------------------KTKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KA 192 (503)
Q Consensus 144 -~~~~--~~~~~~~~~~---------------------------~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~ 192 (503)
...+ .+........ .........+.++...+.+.|.+.+++.|++++ ++
T Consensus 114 ~~~~~~~~g~l~~~~~~~~~g~l~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~g~v~~~~l~~~L~~~~~~~Gv~i~~~~ 193 (405)
T 3c4n_A 114 KTLEVEDRPLLHLLPAGEGSGLTPTLDALADFPEALALLDPARLPVARVDPRALTYRPGSLALLAAQQAIGQGAGLLLNT 193 (405)
T ss_dssp CCCCEEECCEEEEESSCCSSSCEEHHHHTTTCHHHHTTSCTTTSCEEEEETTCEEECHHHHHHHHHHHHHTTTCEEECSC
T ss_pred CCCcEEeeCeEEehhhHhHCCCCCHHHHHHhCCCccccccCCcceEEEEcCCCEEEcHHHHHHHHHHHHHHCCCEEEcCC
Confidence 0000 0000000000 000001122357888999999999999999999 89
Q ss_pred EEE---------EEEEeCCEEEEEeCCCcEEEeceEEecCCCCc-cccc
Q 010693 193 KVW---------HVNHQEFESSIVCDDGNEIKASLIVDASGFAS-SFVE 231 (503)
Q Consensus 193 ~v~---------~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s-~vr~ 231 (503)
+|+ ++..+++.+.|.+.+| +++||.||+|+|.+| .+++
T Consensus 194 ~v~~~~g~~~~~~i~~~~~~v~v~~~~g-~i~a~~VV~A~G~~s~~l~~ 241 (405)
T 3c4n_A 194 RAELVPGGVRLHRLTVTNTHQIVVHETR-QIRAGVIIVAAGAAGPALVE 241 (405)
T ss_dssp EEEEETTEEEEECBCC-------CBCCE-EEEEEEEEECCGGGHHHHHH
T ss_pred EEEeccccccccceEeeCCeEEEEECCc-EEECCEEEECCCccHHHHHH
Confidence 999 8877766777766666 799999999999987 5554
No 45
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=99.47 E-value=8.1e-14 Score=146.73 Aligned_cols=145 Identities=14% Similarity=0.215 Sum_probs=92.5
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCC--cccchhHhhhhcCchhhhhhc------cCceEE
Q 010693 81 SDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPN--NYGVWVDEFEDIGLVDCLDKT------WPMTCV 152 (503)
Q Consensus 81 ~~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~--~~g~~~~~l~~~~~~~~~~~~------~~~~~~ 152 (503)
+....+||+||||||+|+++|+.|++ .|++|+|||+++...... ..+.|... .......+... |....+
T Consensus 103 ~~~~~~DVVIVGgGpaGL~aA~~La~-~G~kV~VlEr~~~~~~R~~~~~g~w~~~--~~~~~~~i~~g~gGag~~sdgkl 179 (549)
T 3nlc_A 103 PENLTERPIVIGFGPCGLFAGLVLAQ-MGFNPIIVERGKEVRERTKDTFGFWRKR--TLNPESNVQFGEGGAGTFSDGKL 179 (549)
T ss_dssp CTTCCCCCEEECCSHHHHHHHHHHHH-TTCCCEEECSSCCHHHHHHHHHHHHHHC--CCCTTSSSSSSTTGGGTTSCCCC
T ss_pred ccCCCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEEccCcccccccchhcccccc--cccccccceeccCCcccccCCce
Confidence 45567999999999999999999999 999999999875431100 01112110 00000000000 000000
Q ss_pred Ee--c---------------CCc--cc--ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEeC
Q 010693 153 FI--N---------------DHK--TK--YLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVCD 209 (503)
Q Consensus 153 ~~--~---------------~~~--~~--~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~ 209 (503)
.. . .+. .. ......+......+.+.|.+.+++.|++++ +++|+++..+++.+ .|.+.
T Consensus 180 ~~~i~~~~~~~~~v~~~~~~~G~~~~i~~~~~p~~G~~~~~~l~~~L~~~l~~~Gv~I~~~t~V~~I~~~~~~v~gV~l~ 259 (549)
T 3nlc_A 180 YSQVKDPNFYGRKVITEFVEAGAPEEILYVSKPHIGTFKLVTMIEKMRATIIELGGEIRFSTRVDDLHMEDGQITGVTLS 259 (549)
T ss_dssp CCCSCCTTCHHHHHHHHHHHTTCCGGGGTBSSCCCCHHHHHHHHHHHHHHHHHTTCEEESSCCEEEEEESSSBEEEEEET
T ss_pred EEEeccccccHHHHHHHHHHcCCCceEeeccccccccchHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEeCCEEEEEEEC
Confidence 00 0 000 00 000112224457788899999999999999 99999999887754 48888
Q ss_pred CCcEEEeceEEecCCCCcc
Q 010693 210 DGNEIKASLIVDASGFASS 228 (503)
Q Consensus 210 ~g~~i~a~~vI~A~G~~s~ 228 (503)
+|+++.||+||+|+|.++.
T Consensus 260 ~G~~i~Ad~VVlA~G~~s~ 278 (549)
T 3nlc_A 260 NGEEIKSRHVVLAVGHSAR 278 (549)
T ss_dssp TSCEEECSCEEECCCTTCH
T ss_pred CCCEEECCEEEECCCCChh
Confidence 9989999999999999984
No 46
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=99.47 E-value=2e-13 Score=139.76 Aligned_cols=138 Identities=17% Similarity=0.153 Sum_probs=91.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCC------cc-----cc------------hhHhhhhcCc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPN------NY-----GV------------WVDEFEDIGL 139 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~------~~-----g~------------~~~~l~~~~~ 139 (503)
+.++||+|||||+||+++|+.|++ +|++|+|||+.+..+... .| .. ....+.....
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~-~G~~V~llEk~~~~g~~~~~sGgg~~n~t~~~~~~~~~~~~~~~~~~~~l~~~~~ 103 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGK-RGRRVLVIDHARAPGEKIRISGGGRCNFTNIHASPRNFLSGNPHFCKSALARYRP 103 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCHHHHHSGGGTCEEEETTCSGGGEEESSTTTTHHHHHHSCH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCCCCCceeEEcCCCceeccCCCCCHHHHhhcCHHHHHHHHHhcCH
Confidence 356999999999999999999999 999999999987542100 00 00 0011111111
Q ss_pred hhhhhhcc-CceEEEecCCcccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEec
Q 010693 140 VDCLDKTW-PMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKAS 217 (503)
Q Consensus 140 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~ 217 (503)
.+.+.... .+........ ...+.......+.+.|.+.+++.|++++ +++|+++..+++.+.|.+.+| +++||
T Consensus 104 ~~~~~~~~~~Gi~~~~~~~-----g~~~~~~~~~~l~~~L~~~l~~~Gv~i~~~~~V~~i~~~~~~~~V~~~~g-~i~ad 177 (417)
T 3v76_A 104 QDFVALVERHGIGWHEKTL-----GQLFCDHSAKDIIRMLMAEMKEAGVQLRLETSIGEVERTASGFRVTTSAG-TVDAA 177 (417)
T ss_dssp HHHHHHHHHTTCCEEECST-----TEEEESSCHHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTE-EEEES
T ss_pred HHHHHHHHHcCCCcEEeeC-----CEEeeCCCHHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCc-EEEee
Confidence 11111000 0000111110 1112225678899999999999999999 999999999888899999888 89999
Q ss_pred eEEecCCCCc
Q 010693 218 LIVDASGFAS 227 (503)
Q Consensus 218 ~vI~A~G~~s 227 (503)
.||+|+|..|
T Consensus 178 ~VIlAtG~~S 187 (417)
T 3v76_A 178 SLVVASGGKS 187 (417)
T ss_dssp EEEECCCCSS
T ss_pred EEEECCCCcc
Confidence 9999999988
No 47
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=99.47 E-value=6.9e-13 Score=137.31 Aligned_cols=82 Identities=18% Similarity=0.131 Sum_probs=59.9
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEE---------------eCCEE-EEEeCCCcEE--EeceEEecCCCCcc
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNH---------------QEFES-SIVCDDGNEI--KASLIVDASGFASS 228 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~---------------~~~~~-~v~~~~g~~i--~a~~vI~A~G~~s~ 228 (503)
.++...+.+.|.+.+++.|++++ +++|+++.. +++.+ .|.+.+| ++ +||.||.|+|.++.
T Consensus 177 ~~~~~~l~~~L~~~~~~~Gv~i~~~~~V~~i~~~~~~~~~~~~~~~~~~~~~v~~V~t~~g-~i~~~Ad~VV~AtG~~s~ 255 (448)
T 3axb_A 177 FLDAEKVVDYYYRRASGAGVEFIFGRRVVGVELKPRVELGIEGEPLPWQEARASAAVLSDG-TRVEVGEKLVVAAGVWSN 255 (448)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEESCCEEEEEEEESSCCCCTTSSCTTSCEEEEEEEETTS-CEEEEEEEEEECCGGGHH
T ss_pred EEcHHHHHHHHHHHHHhCCCEEEcCCeEEEEEecccccccccccccccCCCceEEEEeCCC-EEeecCCEEEECCCcCHH
Confidence 36788999999999999999999 899999987 45554 5777777 68 99999999998875
Q ss_pred -cccccCCCCCccceeEEEEEEec
Q 010693 229 -FVEYDKPRNHGYQIAHGILAEVE 251 (503)
Q Consensus 229 -vr~~~~~~~~~~~~~~g~~~~~~ 251 (503)
+.+..+.. .......|....++
T Consensus 256 ~l~~~~g~~-~~~~p~rg~~~~~~ 278 (448)
T 3axb_A 256 RLLNPLGID-TFSRPKKRMVFRVS 278 (448)
T ss_dssp HHHGGGTCC-CSEEEEEEEEEEEE
T ss_pred HHHHHcCCC-CcccccceEEEEeC
Confidence 54433322 23334445544443
No 48
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=99.44 E-value=6.6e-13 Score=124.97 Aligned_cols=126 Identities=14% Similarity=0.042 Sum_probs=88.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.+|||+|||||++|+.+|+.|++ .|.+|+|||+...... ..+..+. ........+.. .. +
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~-~g~~v~lie~~~~~~G-~~~~~~~---~~~~~~~~~~~-~~-------d------- 61 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQ-KGVRVGLLTQSLDAVM-MPFLPPK---PPFPPGSLLER-AY-------D------- 61 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCGGGTT-CCSSCCC---SCCCTTCHHHH-HC-------C-------
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEecCCCcCC-cccCccc---cccchhhHHhh-hc-------c-------
Confidence 46999999999999999999999 9999999998732111 1110000 00000000000 00 0
Q ss_pred CCccccCHHHHHHHHHHHHHhC-CcEEEEeEEEEEEEeCCEE-EEEeCCCcEEEeceEEecCCCCccccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSN-GVKFHKAKVWHVNHQEFES-SIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~-gv~~~~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
..+. ++..+.+.|.+.+++. |+++++++|+++..+++.+ .|.+.+|++++||+||+|+|..+..+.
T Consensus 62 -~~g~-~~~~~~~~l~~~~~~~~gv~i~~~~v~~i~~~~~~v~~v~~~~g~~i~a~~VV~A~G~~s~~~~ 129 (232)
T 2cul_A 62 -PKDE-RVWAFHARAKYLLEGLRPLHLFQATATGLLLEGNRVVGVRTWEGPPARGEKVVLAVGSFLGARL 129 (232)
T ss_dssp -TTCC-CHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCCEECSEEEECCTTCSSCEE
T ss_pred -CCCC-CHHHHHHHHHHHHHcCCCcEEEEeEEEEEEEeCCEEEEEEECCCCEEECCEEEECCCCChhhce
Confidence 0011 6788999999999886 9999977999999887764 577888888999999999999886654
No 49
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=99.43 E-value=4.1e-11 Score=127.61 Aligned_cols=207 Identities=16% Similarity=0.185 Sum_probs=115.1
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEeC---CCc--EEEeceEEecCCCCc-ccccccCCCC--
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVCD---DGN--EIKASLIVDASGFAS-SFVEYDKPRN-- 237 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~---~g~--~i~a~~vI~A~G~~s-~vr~~~~~~~-- 237 (503)
.++...+...+.+.+.+.|++++ +++|+++..+++.+ .|.+. +|+ +++|+.||.|+|.++ .+.+..+...
T Consensus 184 ~v~~~~l~~~l~~~a~~~Ga~i~~~t~V~~l~~~~~~v~gV~~~d~~tg~~~~i~A~~VV~AaG~ws~~l~~~~g~~~~~ 263 (571)
T 2rgh_A 184 RNNDARLVIDNIKKAAEDGAYLVSKMKAVGFLYEGDQIVGVKARDLLTDEVIEIKAKLVINTSGPWVDKVRNLNFTRPVS 263 (571)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEESSEEEEEEEEETTEEEEEEEEETTTCCEEEEEBSCEEECCGGGHHHHHTTCCSSCCC
T ss_pred eEchHHHHHHHHHHHHHcCCeEEeccEEEEEEEeCCEEEEEEEEEcCCCCEEEEEcCEEEECCChhHHHHHHhhccCccC
Confidence 36778888889999999999999 89999999887753 35542 343 799999999999887 4444333221
Q ss_pred CccceeEEEEEEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEeccccc---C--CCCCCH
Q 010693 238 HGYQIAHGILAEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLV---S--RPVLSY 312 (503)
Q Consensus 238 ~~~~~~~g~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~---~--~~~~~~ 312 (503)
.......|....++.........++++.. ..+| ..+|++|.. +.++++.+... . ....+.
T Consensus 264 ~~i~p~rG~~l~~~~~~~~~~~~~~~~~~----------~~dg----r~~~~~P~~-~~~~iG~t~~~~~~~~~~~~~~~ 328 (571)
T 2rgh_A 264 PKMRPTKGIHLVVDAKKLPVPQPTYFDTG----------KQDG----RMVFAIPRE-NKTYFGTTDTDYQGDFTDPKVTQ 328 (571)
T ss_dssp CCBCCEEEEEEEEEGGGSCCSSCEEEECS----------SSSS----CEEEEEEET-TEEEECCCCEECCSCSSSCCCCH
T ss_pred ceeeccceEEEEeccccCCCCcEEEEecc----------CCCC----cEEEEEEcC-CeEEEcCCCcCCCCCcCCCCCCH
Confidence 23455667666554322222222222210 0133 357889985 56777765431 1 122333
Q ss_pred H---HHHHHHHHHHhhcCCccceEeecceecccCCCCC---CCCCCCEEEecc-CCCCcCCcccHHHHHHHHhHHHHHHH
Q 010693 313 K---EVKRRMAARLRHMGIRVKRVIEDEKCLIPMGGPL---PVIPQSVMAIGS-TSGLVHPSTGYMVARTMALAPALADA 385 (503)
Q Consensus 313 ~---~~~~~l~~~l~~~~~~~~~i~~~~~~~~p~~~~~---~~~~~~v~liGD-Aa~~~~P~~G~G~~~al~~a~~lA~~ 385 (503)
+ .+.+.+.++++...+...++.....+..|+.... +..-.|-..++. ..+.++-.+| .+..+-..|..+++.
T Consensus 329 ~~~~~ll~~~~~~~P~~~l~~~~v~~~waG~Rp~~~d~~~~~~~~~r~~~i~~~~~gl~~v~GG-k~Tt~r~~Ae~~~~~ 407 (571)
T 2rgh_A 329 EDVDYLLDVINHRYPEANITLADIEASWAGLRPLLIGNSGSPSTISRGSSLEREPDGLLTLSGG-KITDYRKMAEGALRL 407 (571)
T ss_dssp HHHHHHHHHHHHHSTTTCCCGGGCCEEEEEEECCBCC-----------EEEEECTTSCEEEEEC-CGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCchhceeEEeEEeeeccCCCCCCcccCCCCcEEecCCCCeEEEeCc-chhhHHHHHHHHHHH
Confidence 3 3444555555543334445666667888875321 110011112232 1233332223 255555566677777
Q ss_pred HHHHh
Q 010693 386 IAECL 390 (503)
Q Consensus 386 l~~~l 390 (503)
+.+.+
T Consensus 408 i~~~l 412 (571)
T 2rgh_A 408 IRQLL 412 (571)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 77665
No 50
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=99.43 E-value=1.2e-11 Score=117.68 Aligned_cols=37 Identities=35% Similarity=0.390 Sum_probs=34.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
.+||+|||||||||+||+.|++ +|++|+|||+.+..+
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~-~G~~V~v~Ek~~~~G 38 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTA-AGHQVHLFDKSRGSG 38 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCCCC
Confidence 5899999999999999999999 999999999987653
No 51
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=99.41 E-value=8.1e-12 Score=125.51 Aligned_cols=184 Identities=13% Similarity=0.066 Sum_probs=106.6
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcccccccCCCCCccceeEEEE
Q 010693 168 RVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEYDKPRNHGYQIAHGIL 247 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~~~~~~~~~~~~~~g~~ 247 (503)
.++...+...|.+.+++.|++++.++|+++..+ .+ +||.||.|+|.++.-. ............|..
T Consensus 138 ~v~p~~~~~~l~~~~~~~G~~i~~~~v~~l~~~-----------~~-~a~~VV~A~G~~s~~l--~~~~~~~~~p~rg~~ 203 (363)
T 1c0p_A 138 SVHAPKYCQYLARELQKLGATFERRTVTSLEQA-----------FD-GADLVVNATGLGAKSI--AGIDDQAAEPIRGQT 203 (363)
T ss_dssp ECCHHHHHHHHHHHHHHTTCEEEECCCSBGGGT-----------CS-SCSEEEECCGGGGGTS--BTTCCTTEEEEEEEE
T ss_pred eecHHHHHHHHHHHHHHCCCEEEEEEcccHhhc-----------Cc-CCCEEEECCCcchhhc--cCcccCCccccCCeE
Confidence 478999999999999999999987777776532 12 8999999999887421 111223444456665
Q ss_pred EEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccCC--CCCCHH---HHHHHHHHH
Q 010693 248 AEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSR--PVLSYK---EVKRRMAAR 322 (503)
Q Consensus 248 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~~--~~~~~~---~~~~~l~~~ 322 (503)
..++.+. ... .+. . ...+ ...|++|..++.++++.+..... ...+.+ .+.+.+.+.
T Consensus 204 ~~~~~~~-~~~--~~~-~-----------~~~~----~~~y~~p~~~g~~~iG~t~~~~~~~~~~~~~~~~~l~~~~~~~ 264 (363)
T 1c0p_A 204 VLVKSPC-KRC--TMD-S-----------SDPA----SPAYIIPRPGGEVICGGTYGVGDWDLSVNPETVQRILKHCLRL 264 (363)
T ss_dssp EEEECCC-CCC--EEE-C-----------SCTT----CCEEEEEETTTEEEEECCCEETCCCCSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCc-ccc--eEe-e-----------ccCC----CcEEEEEcCCCEEEEEeeeccCCCCCCCCHHHHHHHHHHHHHh
Confidence 5554322 111 110 0 0011 12788898888888876643222 122232 344455555
Q ss_pred HhhcCC----ccceEeecceecccCCCCCCCCCCCEEEec---------------------cCCCC-------cCCcccH
Q 010693 323 LRHMGI----RVKRVIEDEKCLIPMGGPLPVIPQSVMAIG---------------------STSGL-------VHPSTGY 370 (503)
Q Consensus 323 l~~~~~----~~~~i~~~~~~~~p~~~~~~~~~~~v~liG---------------------DAa~~-------~~P~~G~ 370 (503)
++.+.. ...++.....+.+|+.. ++..++| +..+. ..-++|.
T Consensus 265 ~P~l~~~~~~~~~~i~~~w~G~rp~t~------d~~piig~~~~~~~~~~~~~~d~~~~~g~~p~~~~~~~~~a~G~~g~ 338 (363)
T 1c0p_A 265 DPTISSDGTIEGIEVLRHNVGLRPARR------GGPRVEAERIVLPLDRTKSPLSLGRGSARAAKEKEVTLVHAYGFSSA 338 (363)
T ss_dssp CGGGSSSSSGGGCEEEEEEEEEEEEET------TSCEEEEEEEEESCCTTTCTTCSSCTTCCCSCCEEEEEEEEECCTTC
T ss_pred CccccCCcccccceEeeceEEECCCCC------CCceeEEEecccccccccCccccccccccccccccceEEEecCCCCc
Confidence 555421 22345555666666532 2222222 22211 1224678
Q ss_pred HHHHHHHhHHHHHHHHHHHh
Q 010693 371 MVARTMALAPALADAIAECL 390 (503)
Q Consensus 371 G~~~al~~a~~lA~~l~~~l 390 (503)
|+..+...|..+|+.|...+
T Consensus 339 G~~~a~~~g~~~a~li~~~l 358 (363)
T 1c0p_A 339 GYQQSWGAAEDVAQLVDEAF 358 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred chheeccHHHHHHHHHHHHH
Confidence 99999988888888887654
No 52
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=99.41 E-value=2.3e-12 Score=133.40 Aligned_cols=140 Identities=21% Similarity=0.226 Sum_probs=90.0
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCC--------c---ccchhHhhhhcCch-----hhhhh
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPN--------N---YGVWVDEFEDIGLV-----DCLDK 145 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~--------~---~g~~~~~l~~~~~~-----~~~~~ 145 (503)
...++||+|||||+||+++|+.|++ +|.+|+|||+.+..+... . .+.+...+..++.. ..+..
T Consensus 23 ~~~~~dVvIIGgG~aGl~aA~~la~-~G~~V~llEk~~~~g~~~~~sg~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (447)
T 2i0z_A 23 NAMHYDVIVIGGGPSGLMAAIGAAE-EGANVLLLDKGNKLGRKLAISGGGRCNVTNRLPLDEIVKHIPGNGRFLYSAFSI 101 (447)
T ss_dssp --CCCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCHHHHHTGGGTCCCEECSCHHHHHHTCTBTGGGGHHHHHH
T ss_pred ccCCCCEEEECCcHHHHHHHHHHHH-CCCCEEEEECCCCCCceeEEeCCCceeccCcccHHHHHHHhccChHHHHHHHHh
Confidence 3456999999999999999999999 999999999876542100 0 00111111111110 00000
Q ss_pred -------cc---CceEEEecCCcccccCCCccc-cCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE-EEEEeCCCc
Q 010693 146 -------TW---PMTCVFINDHKTKYLDRPYGR-VSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE-SSIVCDDGN 212 (503)
Q Consensus 146 -------~~---~~~~~~~~~~~~~~~~~~~~~-v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g~ 212 (503)
.| .+..+..... ..-+.. -....+.+.|.+.+++.|++++ +++|+++..+++. +.|.+.+|+
T Consensus 102 ~~~~~~~~~~~~~G~~~~~~~~-----g~~~p~~~~~~~l~~~L~~~~~~~GV~i~~~~~V~~i~~~~~~v~~V~~~~G~ 176 (447)
T 2i0z_A 102 FNNEDIITFFENLGVKLKEEDH-----GRMFPVSNKAQSVVDALLTRLKDLGVKIRTNTPVETIEYENGQTKAVILQTGE 176 (447)
T ss_dssp SCHHHHHHHHHHTTCCEEECGG-----GEEEETTCCHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTCC
T ss_pred cCHHHHHHHHHhcCCceEEeeC-----CEEECCCCCHHHHHHHHHHHHHHCCCEEEeCcEEEEEEecCCcEEEEEECCCC
Confidence 00 0000000000 000100 1357888999999999999999 9999999987776 778888887
Q ss_pred EEEeceEEecCCCCc
Q 010693 213 EIKASLIVDASGFAS 227 (503)
Q Consensus 213 ~i~a~~vI~A~G~~s 227 (503)
+++||.||+|+|..|
T Consensus 177 ~i~Ad~VVlAtGg~s 191 (447)
T 2i0z_A 177 VLETNHVVIAVGGKS 191 (447)
T ss_dssp EEECSCEEECCCCSS
T ss_pred EEECCEEEECCCCCc
Confidence 899999999999988
No 53
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=99.40 E-value=2.5e-12 Score=136.55 Aligned_cols=143 Identities=16% Similarity=0.119 Sum_probs=96.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC-CCCCCcc----cc-----hhHhhhhcCc--hhhhhhccCceE
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL-STWPNNY----GV-----WVDEFEDIGL--VDCLDKTWPMTC 151 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~-~~~~~~~----g~-----~~~~l~~~~~--~~~~~~~~~~~~ 151 (503)
..|||+|||||+||+.+|+.|++ .|.+|+|||+.+. .+. ..| |. ....+..++- ..... ...
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~~~iG~-~~Cnps~ggia~~~lv~ei~algg~~~~~~d----~~g 100 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAAR-MGQQTLLLTHNIDTLGQ-MSCNPAIGGIGKGHLVKEVDALGGLMAKAID----QAG 100 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCGGGTTC-CSSSSEEESTTHHHHHHHHHHTTCSHHHHHH----HHE
T ss_pred CcCCEEEECChHHHHHHHHHHHh-CCCCEEEEeeccccccc-ccccccccchhhHHHHHHHHHhccHHHHHhh----hcc
Confidence 36999999999999999999999 9999999998742 221 112 11 2222333321 11111 111
Q ss_pred EEec---CCcccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEeEEEEEEEeCCEE-EEEeCCCcEEEeceEEecCCCC
Q 010693 152 VFIN---DHKTKYLDRPYGRVSRNILKTKLLENCVS-NGVKFHKAKVWHVNHQEFES-SIVCDDGNEIKASLIVDASGFA 226 (503)
Q Consensus 152 ~~~~---~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vI~A~G~~ 226 (503)
+.+. .........+...+++..+.+.|.+.+.+ .|+++++++|+++..+++.+ .|.+.+|.++.|+.||+|+|.+
T Consensus 101 i~f~~l~~~kgpav~~~r~~~Dr~~~~~~L~e~Le~~~GV~I~~~~V~~L~~e~g~V~GV~t~dG~~I~Ad~VVLATGt~ 180 (651)
T 3ces_A 101 IQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFRAKAVVLTVGTF 180 (651)
T ss_dssp EEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEESSSBEEEEEETTSEEEEEEEEEECCSTT
T ss_pred cchhhhhcccCcccccchhhCCHHHHHHHHHHHHHhCCCCEEEEEEEEEEEecCCEEEEEEECCCCEEECCEEEEcCCCC
Confidence 2111 11111111122347899999999999988 79999988999998877654 6778888889999999999998
Q ss_pred cccccc
Q 010693 227 SSFVEY 232 (503)
Q Consensus 227 s~vr~~ 232 (503)
+..+..
T Consensus 181 s~~~~i 186 (651)
T 3ces_A 181 LDGKIH 186 (651)
T ss_dssp TCCEEE
T ss_pred ccCccc
Confidence 765543
No 54
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=99.39 E-value=2.2e-12 Score=128.73 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=92.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCch-hhhhhccCceEEEecCCccccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLV-DCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
.++||+|||||++|+++|..|++ .|++|+|||+.+..+ |.|......+.+. ....... .... ..
T Consensus 2 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~vie~~~~~g-----g~~~~~~~~~~~~~~~~~~~~-------~~~~--~~ 66 (357)
T 4a9w_A 2 DSVDVVVIGGGQSGLSAGYFLRR-SGLSYVILDAEASPG-----GAWQHAWHSLHLFSPAGWSSI-------PGWP--MP 66 (357)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-SSCCEEEECCSSSSS-----GGGGGSCTTCBCSSCGGGSCC-------SSSC--CC
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCCCCC-----CcccCCCCCcEecCchhhhhC-------CCCC--CC
Confidence 46899999999999999999999 999999999876432 3343211111110 0000000 0000 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEeCCCcEEEeceEEecCCCCcc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.....+..+..+.+.+.+.+.+.|++++ +++|++++.+++.+. |.+++| ++.+|.||.|+|.++.
T Consensus 67 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g-~~~~d~vV~AtG~~~~ 133 (357)
T 4a9w_A 67 ASQGPYPARAEVLAYLAQYEQKYALPVLRPIRVQRVSHFGERLRVVARDGR-QWLARAVISATGTWGE 133 (357)
T ss_dssp CCSSSSCBHHHHHHHHHHHHHHTTCCEECSCCEEEEEEETTEEEEEETTSC-EEEEEEEEECCCSGGG
T ss_pred CCccCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEECCCcEEEEEeCCC-EEEeCEEEECCCCCCC
Confidence 1122235678899999999999999999 899999999999888 888887 8999999999998664
No 55
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.39 E-value=1.6e-10 Score=121.23 Aligned_cols=60 Identities=12% Similarity=0.205 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEeCCCcEEEeceEEecCCCCcccccc
Q 010693 173 ILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVCDDGNEIKASLIVDASGFASSFVEY 232 (503)
Q Consensus 173 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vI~A~G~~s~vr~~ 232 (503)
.+.+.|.+.+++.|++|+ +++|++|..++++++ |++.||+++.||.||.+.+.....+.+
T Consensus 222 ~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~~gV~~~~g~~~~ad~VV~~a~~~~~~~~L 283 (501)
T 4dgk_A 222 ALVQGMIKLFQDLGGEVVLNARVSHMETTGNKIEAVHLEDGRRFLTQAVASNADVVHTYRDL 283 (501)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSCEEECCC--------
T ss_pred chHHHHHHHHHHhCCceeeecceeEEEeeCCeEEEEEecCCcEEEcCEEEECCCHHHHHHHh
Confidence 466677888889999999 999999999998766 888999999999999988776655443
No 56
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=99.38 E-value=4e-12 Score=134.44 Aligned_cols=141 Identities=18% Similarity=0.252 Sum_probs=95.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC-CCCCCcc----c-----chhHhhhhcCc--hhhhhhccCceE
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL-STWPNNY----G-----VWVDEFEDIGL--VDCLDKTWPMTC 151 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~-~~~~~~~----g-----~~~~~l~~~~~--~~~~~~~~~~~~ 151 (503)
..|||+|||||+||+.||++|++ .|.+|+|||+.+. .+. ..| | .+...++.++- ....+. ..
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr-~G~kVlLIEk~~~~iG~-~~Cnps~GGia~g~lv~eldalgg~~~~~~d~----~g 99 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAAR-MGAKTAMFVLNADTIGQ-MSCNPAIGGIAKGIVVREIDALGGEMGKAIDQ----TG 99 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCGGGTTC-CCSCSEEECTTHHHHHHHHHHHTCSHHHHHHH----HE
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCCEEEEEecccccCC-cCccccccccchHHHHHHHHHhhhHHHHHhhh----cc
Confidence 35999999999999999999999 9999999998742 221 111 1 12223333331 111111 11
Q ss_pred EEec---CCcccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEeEEEEEEEeCCEE-EEEeCCCcEEEeceEEecCCCC
Q 010693 152 VFIN---DHKTKYLDRPYGRVSRNILKTKLLENCVS-NGVKFHKAKVWHVNHQEFES-SIVCDDGNEIKASLIVDASGFA 226 (503)
Q Consensus 152 ~~~~---~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vI~A~G~~ 226 (503)
+.+. .............+++..+.+.|.+.+++ .|+++++++|+++..+++.+ .|.+.+|.++.|+.||+|+|..
T Consensus 100 i~f~~l~~~kGpav~~~r~~~Dr~~~~~~L~~~Le~~~GVeI~~~~Vt~L~~e~g~V~GV~t~dG~~i~AdaVVLATG~~ 179 (637)
T 2zxi_A 100 IQFKMLNTRKGKAVQSPRAQADKKRYREYMKKVCENQENLYIKQEEVVDIIVKNNQVVGVRTNLGVEYKTKAVVVTTGTF 179 (637)
T ss_dssp EEEEEESTTSCGGGCEEEEEECHHHHHHHHHHHHHTCTTEEEEESCEEEEEESSSBEEEEEETTSCEEECSEEEECCTTC
T ss_pred cceeecccccCccccchhhhCCHHHHHHHHHHHHHhCCCCEEEEeEEEEEEecCCEEEEEEECCCcEEEeCEEEEccCCC
Confidence 2221 11111111122247899999999999988 69999988999998877755 5788889899999999999987
Q ss_pred cccc
Q 010693 227 SSFV 230 (503)
Q Consensus 227 s~vr 230 (503)
+..+
T Consensus 180 s~~~ 183 (637)
T 2zxi_A 180 LNGV 183 (637)
T ss_dssp BTCE
T ss_pred ccCc
Confidence 6544
No 57
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=99.36 E-value=6.6e-12 Score=133.24 Aligned_cols=141 Identities=18% Similarity=0.194 Sum_probs=94.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC-CCCCCcc----cc-----hhHhhhhcC-chhhhhhccCceEE
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL-STWPNNY----GV-----WVDEFEDIG-LVDCLDKTWPMTCV 152 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~-~~~~~~~----g~-----~~~~l~~~~-~~~~~~~~~~~~~~ 152 (503)
..|||+|||||+||+.+|++|++ .|.+|+|||+.+. .+. ..| |. ....+..++ +.. ..+....+
T Consensus 20 ~~yDVIVIGgG~AGl~AAlaLAr-~G~kVlLIEk~~~~iG~-~~c~ps~gGia~~~lv~el~al~g~~~---~~~d~~gi 94 (641)
T 3cp8_A 20 HMYDVIVVGAGHAGCEAALAVAR-GGLHCLLITSDLSAVAR-MSCNPAIGGVAKGQITREIDALGGEMG---KAIDATGI 94 (641)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESCGGGTTC-CSSCSEEECHHHHHHHHHHHHHTCSHH---HHHHHHEE
T ss_pred CcCCEEEECccHHHHHHHHHHHH-CCCcEEEEEecccccCC-CccccchhhhhHHHHHHHHHhcccHHH---HHHHhcCC
Confidence 46999999999999999999999 9999999998742 211 111 11 112222222 110 00111112
Q ss_pred Eec---CCcccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEeEEEEEEEeCCEEE-EEeCCCcEEEeceEEecCCCCc
Q 010693 153 FIN---DHKTKYLDRPYGRVSRNILKTKLLENCVS-NGVKFHKAKVWHVNHQEFESS-IVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 153 ~~~---~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vI~A~G~~s 227 (503)
.+. .........+...+++..+...+.+.+.+ .|+++++.+|+++..+++.+. |.+.+|.++.|+.||+|+|.++
T Consensus 95 ~f~~l~~~kgpav~~~r~~~Dr~~l~~~L~~~l~~~~GV~I~~~~V~~L~~d~g~V~GV~t~~G~~i~Ad~VVLATG~~s 174 (641)
T 3cp8_A 95 QFRMLNRSKGPAMHSPRAQADKTQYSLYMRRIVEHEPNIDLLQDTVIGVSANSGKFSSVTVRSGRAIQAKAAILACGTFL 174 (641)
T ss_dssp EEEEECSSSCTTTCEEEEEECHHHHHHHHHHHHHTCTTEEEEECCEEEEEEETTEEEEEEETTSCEEEEEEEEECCTTCB
T ss_pred chhhcccccCccccchhhhcCHHHHHHHHHHHHHhCCCCEEEeeEEEEEEecCCEEEEEEECCCcEEEeCEEEECcCCCC
Confidence 221 11110111122248899999999999888 599999779999988888776 8888888999999999999876
Q ss_pred cc
Q 010693 228 SF 229 (503)
Q Consensus 228 ~v 229 (503)
..
T Consensus 175 ~~ 176 (641)
T 3cp8_A 175 NG 176 (641)
T ss_dssp TC
T ss_pred Cc
Confidence 43
No 58
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=99.36 E-value=6.6e-12 Score=125.55 Aligned_cols=188 Identities=15% Similarity=0.155 Sum_probs=106.2
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcccccccCCCCCccceeEEEE
Q 010693 168 RVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVEYDKPRNHGYQIAHGIL 247 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~~~~~~~~~~~~~~g~~ 247 (503)
.++...+...|.+.+++.|++++.++|++++..+ .++||.||.|+|.+|.-. .. ........|..
T Consensus 138 ~v~p~~~~~~l~~~~~~~Gv~i~~~~V~~i~~~~-----------~~~a~~VV~A~G~~s~~l--~~--~~~l~p~rg~~ 202 (351)
T 3g3e_A 138 ILEGKNYLQWLTERLTERGVKFFQRKVESFEEVA-----------REGADVIVNCTGVWAGAL--QR--DPLLQPGRGQI 202 (351)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEEECCCCCHHHHH-----------HTTCSEEEECCGGGGGGT--SC--CTTCEEEEEEE
T ss_pred EEcHHHHHHHHHHHHHHCCCEEEEEEeCCHHHhh-----------cCCCCEEEECCCcChHhh--cC--CCceeecCCcE
Confidence 4788899999999999999999876776654321 267999999999987421 11 13344455665
Q ss_pred EEecCCCCCCCceEEeeccCCCCCCCcccccCCCCCCeEEEEeecCCCeEEEecccccCC--CCCCHH---HHHHHHHHH
Q 010693 248 AEVESHPFDLDKMVLMDWRDSHLGNEPYLRASNLKLPTFLYAMPFDSNLVFLEETSLVSR--PVLSYK---EVKRRMAAR 322 (503)
Q Consensus 248 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~v~~~~~~~~--~~~~~~---~~~~~l~~~ 322 (503)
..++.+. ....++..... ... ..++|+.|..+ .++++.+..... ...+.+ .+.+.+.++
T Consensus 203 ~~~~~~~--~~~~~~~~~~~---------~~~----~~~~y~~p~~~-~~~iGg~~~~~~~~~~~~~~~~~~l~~~~~~~ 266 (351)
T 3g3e_A 203 MKVDAPW--MKHFILTHDPE---------RGI----YNSPYIIPGTQ-TVTLGGIFQLGNWSELNNIQDHNTIWEGCCRL 266 (351)
T ss_dssp EEEECTT--CCSEEEECCTT---------TCT----TCSCEEEECSS-CEEEECCCEETCCCCSCCHHHHHHHHHHHHHH
T ss_pred EEEeCCC--cceEEEecccc---------CCC----CceeEEEeCCC-cEEEeeeeecCCCCCCCCHHHHHHHHHHHHHh
Confidence 5554322 22333321000 001 13478889887 666665433221 122333 333444444
Q ss_pred HhhcCCccceEeecceecccCCCCCCCCCCCEEEeccCC---CC--cCCcccHHHHHHHHhHHHHHHHHHHHhc
Q 010693 323 LRHMGIRVKRVIEDEKCLIPMGGPLPVIPQSVMAIGSTS---GL--VHPSTGYMVARTMALAPALADAIAECLG 391 (503)
Q Consensus 323 l~~~~~~~~~i~~~~~~~~p~~~~~~~~~~~v~liGDAa---~~--~~P~~G~G~~~al~~a~~lA~~l~~~l~ 391 (503)
++.+ ...++.....+.+|+....|.. + .++|-.. +. ..-+.|.|+..+...|..+|+.|.+.+.
T Consensus 267 ~P~l--~~~~i~~~w~G~r~~t~D~p~~-~--~~ig~~~~~~~~~~~~G~~g~G~~~ap~~g~~la~li~~~~~ 335 (351)
T 3g3e_A 267 EPTL--KNARIIGERTGFRPVRPQIRLE-R--EQLRTGPSNTEVIHNYGHGGYGLTIHWGCALEAAKLFGRILE 335 (351)
T ss_dssp CGGG--GGCEEEEEEEEEEEECSSCEEE-E--EEECCSSSCEEEEEEECCTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCc--cCCcEeeeeEeeCCCCCCccce-e--eeccCCCCCCeEEEEeCCCcchHhhhHHHHHHHHHHHHHHHH
Confidence 4433 2234566666777764322200 0 1233211 11 1113677999999999999999988775
No 59
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=99.35 E-value=3.1e-12 Score=130.33 Aligned_cols=136 Identities=17% Similarity=0.120 Sum_probs=87.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC------Ccc-----cchhH------------hhhhcCch
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP------NNY-----GVWVD------------EFEDIGLV 140 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~------~~~-----g~~~~------------~l~~~~~~ 140 (503)
.+|||+|||||++|+++|+.|++ +|.+|+|||+.+..+.. ..| +.... .+......
T Consensus 3 ~~~dViIIGgG~aGl~aA~~la~-~G~~V~vlEk~~~~g~~~~~sggg~cn~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 81 (401)
T 2gqf_A 3 QYSENIIIGAGAAGLFCAAQLAK-LGKSVTVFDNGKKIGRKILMSGGGFCNFTNLEVTPAHYLSQNPHFVKSALARYTNW 81 (401)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCHHHHHGGGGTCCCEESSCCGGGEECSCTTSTHHHHHHSCHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHh-CCCCEEEEeCCCCCchhcEEcCCCeEEccCCccCHHHhccCCHHHHHHHHHhCCHH
Confidence 36999999999999999999999 99999999998654210 000 00000 00000000
Q ss_pred hhhhh--ccCceEEEecCCcccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe----CCEEEEEeCCCcE
Q 010693 141 DCLDK--TWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ----EFESSIVCDDGNE 213 (503)
Q Consensus 141 ~~~~~--~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~----~~~~~v~~~~g~~ 213 (503)
+.+.. .+ +..+...... ... +. -+...+.+.|.+.+++.|++++ +++|+++..+ ++.+.|.+.+| +
T Consensus 82 ~~~~~~~~~-Gi~~~~~~~g-~~~--p~--~~~~~l~~~L~~~~~~~Gv~i~~~~~v~~i~~~~~g~~~~~~v~~~~g-~ 154 (401)
T 2gqf_A 82 DFISLVAEQ-GITYHEKELG-QLF--CD--EGAEQIVEMLKSECDKYGAKILLRSEVSQVERIQNDEKVRFVLQVNST-Q 154 (401)
T ss_dssp HHHHHHHHT-TCCEEECSTT-EEE--ET--TCTHHHHHHHHHHHHHHTCEEECSCCEEEEEECCSCSSCCEEEEETTE-E
T ss_pred HHHHHHHhC-CCceEECcCC-EEc--cC--CCHHHHHHHHHHHHHHCCCEEEeCCEEEEEEcccCcCCCeEEEEECCC-E
Confidence 00000 00 0001110000 000 00 1567888899999999999999 9999999876 56688888776 7
Q ss_pred EEeceEEecCCCCc
Q 010693 214 IKASLIVDASGFAS 227 (503)
Q Consensus 214 i~a~~vI~A~G~~s 227 (503)
++||.||+|+|..|
T Consensus 155 i~ad~VVlAtG~~s 168 (401)
T 2gqf_A 155 WQCKNLIVATGGLS 168 (401)
T ss_dssp EEESEEEECCCCSS
T ss_pred EECCEEEECCCCcc
Confidence 99999999999988
No 60
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=99.34 E-value=6.7e-12 Score=113.00 Aligned_cols=113 Identities=19% Similarity=0.169 Sum_probs=86.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
+|||+|||||++|+.+|..|++ .|.+|+|+|+.+.... +. .+ +. .+ ...
T Consensus 1 ~~~vvIIGgG~~Gl~~A~~l~~-~g~~v~lie~~~~~~~-~~--~~--------~~-----~~--------------~~~ 49 (180)
T 2ywl_A 1 MWDVIVVGGGPSGLSAALFLAR-AGLKVLVLDGGRSKVK-GV--SR--------VP-----NY--------------PGL 49 (180)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSCCTTT-TC--SC--------CC-----CS--------------TTC
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCCCccc-Cc--hh--------hh-----cc--------------CCC
Confidence 3799999999999999999999 9999999998752110 00 00 00 00 000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
+. .+....+.+.+.+.+++.|++++ + +|++++.+++.+.|.+++| ++++|.||.|+|..+.+++
T Consensus 50 ~~-~~~~~~~~~~l~~~~~~~gv~v~~~-~v~~i~~~~~~~~v~~~~g-~i~ad~vI~A~G~~~~~~~ 114 (180)
T 2ywl_A 50 LD-EPSGEELLRRLEAHARRYGAEVRPG-VVKGVRDMGGVFEVETEEG-VEKAERLLLCTHKDPTLPS 114 (180)
T ss_dssp TT-CCCHHHHHHHHHHHHHHTTCEEEEC-CCCEEEECSSSEEEECSSC-EEEEEEEEECCTTCCHHHH
T ss_pred cC-CCCHHHHHHHHHHHHHHcCCEEEeC-EEEEEEEcCCEEEEEECCC-EEEECEEEECCCCCCCccc
Confidence 01 24567888899999999999999 7 9999998777788888888 8999999999999886533
No 61
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=99.34 E-value=1.2e-10 Score=129.67 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=52.8
Q ss_pred ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEeCCCcEEEeceEEecCCCCcc
Q 010693 168 RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 168 ~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.++...+...|.+.+++.|++++ +++|+++..+++.+ .|.+.+| +++||.||.|+|.++.
T Consensus 147 ~v~p~~l~~~L~~~a~~~Gv~i~~~t~V~~i~~~~~~v~~V~t~~G-~i~Ad~VV~AaG~~s~ 208 (830)
T 1pj5_A 147 LASAARAVQLLIKRTESAGVTYRGSTTVTGIEQSGGRVTGVQTADG-VIPADIVVSCAGFWGA 208 (830)
T ss_dssp EECHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTE-EEECSEEEECCGGGHH
T ss_pred eEcHHHHHHHHHHHHHHcCCEEECCceEEEEEEeCCEEEEEEECCc-EEECCEEEECCccchH
Confidence 47888999999999999999999 99999999887765 4677766 7999999999999874
No 62
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=99.33 E-value=1.6e-11 Score=119.13 Aligned_cols=128 Identities=19% Similarity=0.297 Sum_probs=86.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccC-CCcEEEEcCCCCCCCCC-cccc----------hhHhhhhcCchhhhhhccCceE
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRH-SVKVCCVDPSPLSTWPN-NYGV----------WVDEFEDIGLVDCLDKTWPMTC 151 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~-G~~V~viE~~~~~~~~~-~~g~----------~~~~l~~~~~~~~~~~~~~~~~ 151 (503)
.++||+|||||++|+++|+.|++ + |.+|+|||+.+...... .++. ....++.+|+.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~-~~G~~V~viEk~~~~gg~~~~~~~~~~~~~~~~~~~~~l~~~G~~----------- 105 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISK-NPNVQVAIIEQSVSPGGGAWLGGQLFSAMIVRKPAHLFLDEIGVA----------- 105 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHT-STTSCEEEEESSSSCCTTTTCCSTTCCCEEEETTTHHHHHHHTCC-----------
T ss_pred cccCEEEECccHHHHHHHHHHHH-cCCCeEEEEECCCCCCCceecCCcchHHHHcCcHHHHHHHHcCCC-----------
Confidence 46899999999999999999999 8 99999999986543211 1110 01111111110
Q ss_pred EEecCCcccccCCCccc-cCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEE-EEEeC---------CC-----cE
Q 010693 152 VFINDHKTKYLDRPYGR-VSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFES-SIVCD---------DG-----NE 213 (503)
Q Consensus 152 ~~~~~~~~~~~~~~~~~-v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~---------~g-----~~ 213 (503)
+.. ...+.. .+...+...|.+.+.+ .|++++ +++|+++..+++.+ .|.+. +| .+
T Consensus 106 --~~~------~~~~~~~~~~~~~~~~l~~~~~~~~gv~i~~~~~V~~i~~~~~~v~gv~~~~~~~~~~~~~g~~g~~~~ 177 (284)
T 1rp0_A 106 --YDE------QDTYVVVKHAALFTSTIMSKLLARPNVKLFNAVAAEDLIVKGNRVGGVVTNWALVAQNHHTQSCMDPNV 177 (284)
T ss_dssp --CEE------CSSEEEESCHHHHHHHHHHHHHTSTTEEEEETEEEEEEEEETTEEEEEEEEEHHHHTCTTTSSCCCCEE
T ss_pred --ccc------CCCEEEecCHHHHHHHHHHHHHhcCCCEEEcCcEEEEEEecCCeEEEEEEeccccccccCccccCceEE
Confidence 000 001111 2567788888888876 799999 89999999887754 33331 22 47
Q ss_pred EEeceEEecCCCCccccc
Q 010693 214 IKASLIVDASGFASSFVE 231 (503)
Q Consensus 214 i~a~~vI~A~G~~s~vr~ 231 (503)
++||.||+|+|..|.++.
T Consensus 178 i~ad~VV~AtG~~s~~~~ 195 (284)
T 1rp0_A 178 MEAKIVVSSCGHDGPFGA 195 (284)
T ss_dssp EEEEEEEECCCSSSTTTT
T ss_pred EECCEEEECCCCchHHHH
Confidence 999999999999997754
No 63
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=99.32 E-value=1.3e-11 Score=123.84 Aligned_cols=121 Identities=17% Similarity=0.193 Sum_probs=89.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
+..+||+||||||||+++|+.|++ .|++|+|||+.+..+ |.|... .+...++ .
T Consensus 12 ~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~~g-----g~~~~~-------------~~~~~~~-~------- 64 (360)
T 3ab1_A 12 HDMRDLTIIGGGPTGIFAAFQCGM-NNISCRIIESMPQLG-----GQLAAL-------------YPEKHIY-D------- 64 (360)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC-----HHHHHT-------------CTTSEEC-C-------
T ss_pred CCCCCEEEECCCHHHHHHHHHHHh-CCCCEEEEecCCCCC-----Cccccc-------------CCCcccc-c-------
Confidence 346999999999999999999999 999999999865422 222111 0000000 0
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
...+..+++..+.+.+.+.+.+.|++++ +++|+.++.+++ .+.|.+.+|+++.+|.||.|+|..+...
T Consensus 65 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~~li~AtG~~~~~~ 134 (360)
T 3ab1_A 65 VAGFPEVPAIDLVESLWAQAERYNPDVVLNETVTKYTKLDDGTFETRTNTGNVYRSRAVLIAAGLGAFEP 134 (360)
T ss_dssp STTCSSEEHHHHHHHHHHHHHTTCCEEECSCCEEEEEECTTSCEEEEETTSCEEEEEEEEECCTTCSCCB
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCEEEcCCEEEEEEECCCceEEEEECCCcEEEeeEEEEccCCCcCCC
Confidence 0011125577888889888888899998 899999998765 7888888888999999999999976443
No 64
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.32 E-value=4.6e-11 Score=124.05 Aligned_cols=41 Identities=20% Similarity=0.210 Sum_probs=37.1
Q ss_pred cEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 187 VKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 187 v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
++++ +++|++|+.+++++.|++.+|++++||.||.|.+...
T Consensus 248 ~~i~~~~~V~~i~~~~~~~~v~~~~g~~~~ad~vi~a~p~~~ 289 (470)
T 3i6d_A 248 TKVYKGTKVTKLSHSGSCYSLELDNGVTLDADSVIVTAPHKA 289 (470)
T ss_dssp EEEECSCCEEEEEECSSSEEEEESSSCEEEESEEEECSCHHH
T ss_pred CEEEeCCceEEEEEcCCeEEEEECCCCEEECCEEEECCCHHH
Confidence 6888 9999999998888999999998999999999998655
No 65
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=99.32 E-value=1.4e-11 Score=122.15 Aligned_cols=120 Identities=21% Similarity=0.283 Sum_probs=89.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.++||+||||||||+++|+.|++ .|++|+|||+.+..+ |.|... ++...++ + .
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~~g-----g~~~~~-------------~~~~~~~--~------~ 56 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGM-RGLSFRFVDPLPEPG-----GQLTAL-------------YPEKYIY--D------V 56 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSSSC-----HHHHHT-------------CTTSEEC--C------S
T ss_pred CcCcEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCCCC-----Ceeecc-------------CCCceee--c------c
Confidence 46899999999999999999999 999999999865322 223211 0000000 0 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
..+..+....+...+.+.+.+.+++++ +++|+.++.+++.+.|.+.+|.++.+|.||.|+|..+...
T Consensus 57 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~p 124 (335)
T 2zbw_A 57 AGFPKVYAKDLVKGLVEQVAPFNPVYSLGERAETLEREGDLFKVTTSQGNAYTAKAVIIAAGVGAFEP 124 (335)
T ss_dssp TTCSSEEHHHHHHHHHHHHGGGCCEEEESCCEEEEEEETTEEEEEETTSCEEEEEEEEECCTTSEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHcCCEEEeCCEEEEEEECCCEEEEEECCCCEEEeCEEEECCCCCCCCC
Confidence 011225567788888888888899998 8999999988778888888888899999999999976443
No 66
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=99.30 E-value=2e-11 Score=119.64 Aligned_cols=117 Identities=22% Similarity=0.258 Sum_probs=88.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
+|||+||||||||+++|+.|++ .|+ +|+|||+... -|.|... ..+. . ...
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~~v~lie~~~~------gg~~~~~---~~~~---------------~----~~~ 51 (311)
T 2q0l_A 1 MIDCAIIGGGPAGLSAGLYATR-GGVKNAVLFEKGMP------GGQITGS---SEIE---------------N----YPG 51 (311)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCSSEEEECSSST------TCGGGGC---SCBC---------------C----STT
T ss_pred CceEEEECccHHHHHHHHHHHH-CCCCcEEEEcCCCC------Ccccccc---cccc---------------c----CCC
Confidence 3799999999999999999999 999 9999997421 1222100 0000 0 000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
.+ ..+++..+.+.+.+.+.+.|++++.++|++++.+++.+.|.+.+|+++++|.||.|+|..+....
T Consensus 52 ~~-~~~~~~~~~~~l~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~~ 118 (311)
T 2q0l_A 52 VK-EVVSGLDFMQPWQEQCFRFGLKHEMTAVQRVSKKDSHFVILAEDGKTFEAKSVIIATGGSPKRTG 118 (311)
T ss_dssp CC-SCBCHHHHHHHHHHHHHTTSCEEECSCEEEEEEETTEEEEEETTSCEEEEEEEEECCCEEECCCC
T ss_pred Cc-ccCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEEcCCEEEEEEcCCCEEECCEEEECCCCCCCCCC
Confidence 01 13678888899988888899999877899999888888888888889999999999998775543
No 67
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=99.30 E-value=1.9e-11 Score=118.65 Aligned_cols=114 Identities=19% Similarity=0.195 Sum_probs=87.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
++||+||||||||+++|..|++ .|++|+|||+.+.. +.+. . ... .. .
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~~------~~~~----~--------------------~~~-~~-~ 48 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGR-ARKNILLVDAGERR------NRFA----S--------------------HSH-GF-L 48 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCCG------GGGC----S--------------------CCC-SS-T
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCEEEEeCCCcc------cccc----h--------------------hhc-CC-c
Confidence 4899999999999999999999 99999999975411 1000 0 000 00 0
Q ss_pred CccccCHHHHHHHHHHHHHhC-CcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccc
Q 010693 165 PYGRVSRNILKTKLLENCVSN-GVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~-gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
.....+...+...+.+.+.+. ++++++++|++++.+++.+.|.+.+|+++.+|.||.|+|..+....
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~vviAtG~~~~~~~ 116 (297)
T 3fbs_A 49 GQDGKAPGEIIAEARRQIERYPTIHWVEGRVTDAKGSFGEFIVEIDGGRRETAGRLILAMGVTDELPE 116 (297)
T ss_dssp TCTTCCHHHHHHHHHHHHTTCTTEEEEESCEEEEEEETTEEEEEETTSCEEEEEEEEECCCCEEECCC
T ss_pred CCCCCCHHHHHHHHHHHHHhcCCeEEEEeEEEEEEEcCCeEEEEECCCCEEEcCEEEECCCCCCCCCC
Confidence 111356778888888888875 7888877999999998889999999989999999999999775543
No 68
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=99.29 E-value=1.7e-11 Score=120.73 Aligned_cols=126 Identities=14% Similarity=0.228 Sum_probs=84.6
Q ss_pred CCCCCCCCCCC-CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceE
Q 010693 73 FDLPWFHPSDR-IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTC 151 (503)
Q Consensus 73 ~~~~~~~~~~~-~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~ 151 (503)
|.+|...++.+ ..+||+||||||||+++|+.|++ .|++|+|||+... .|.+.. ...+. .+
T Consensus 3 ~~l~~~~~~~m~~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~------gg~~~~---~~~~~-----~~---- 63 (319)
T 3cty_A 3 FNLHAVSSEEKERDFDVVIVGAGAAGFSAAVYAAR-SGFSVAILDKAVA------GGLTAE---APLVE-----NY---- 63 (319)
T ss_dssp -----------CCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSST------TGGGGG---CSCBC-----CB----
T ss_pred ccccccccccccCCCcEEEECcCHHHHHHHHHHHh-CCCcEEEEeCCCC------Cccccc---cchhh-----hc----
Confidence 34444333333 46999999999999999999999 9999999997421 111110 00000 00
Q ss_pred EEecCCcccccCCCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 152 VFINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 152 ~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
..+..++...+.+.+.+.+.+.|++++..+|++++.+++.+.|.+ ++.++.+|.||.|+|..+...
T Consensus 64 ------------~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~-~~~~~~~~~li~AtG~~~~~~ 129 (319)
T 3cty_A 64 ------------LGFKSIVGSELAKLFADHAANYAKIREGVEVRSIKKTQGGFDIET-NDDTYHAKYVIITTGTTHKHL 129 (319)
T ss_dssp ------------TTBSSBCHHHHHHHHHHHHHTTSEEEETCCEEEEEEETTEEEEEE-SSSEEEEEEEEECCCEEECCC
T ss_pred ------------CCCcccCHHHHHHHHHHHHHHcCCEEEEeeEEEEEEeCCEEEEEE-CCCEEEeCEEEECCCCCcccC
Confidence 011135667788888888888999988668999988888777777 566899999999999876543
No 69
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=99.29 E-value=2.2e-11 Score=119.32 Aligned_cols=115 Identities=18% Similarity=0.210 Sum_probs=77.6
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
.|+.|||+||||||||++||+.|++ +|++|+|||++... |.... .+ ++.
T Consensus 3 ~M~~yDVvIIGaGpAGlsAA~~lar-~g~~v~lie~~~~g------g~~~~-------------~~-------~~~---- 51 (304)
T 4fk1_A 3 AMKYIDCAVIGAGPAGLNASLVLGR-ARKQIALFDNNTNR------NRVTQ-------------NS-------HGF---- 51 (304)
T ss_dssp ---CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSCCG------GGGSS-------------CB-------CCS----
T ss_pred CCCCcCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCC------Ceeee-------------ec-------CCc----
Confidence 5678999999999999999999999 99999999975321 11000 00 000
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCC-cEEEEeEEEEEEEe-CCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 162 LDRPYGRVSRNILKTKLLENCVSNG-VKFHKAKVWHVNHQ-EFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~v~r~~l~~~L~~~~~~~g-v~~~~~~v~~i~~~-~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
. .+..+....+.+...+.+.+.+ +.+....+..+... .+.+.+.+.+|+++++|.||.|+|...+.
T Consensus 52 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~a~~liiATGs~p~~ 119 (304)
T 4fk1_A 52 I--TRDGIKPEEFKEIGLNEVMKYPSVHYYEKTVVMITKQSTGLFEIVTKDHTKYLAERVLLATGMQEEF 119 (304)
T ss_dssp T--TCTTBCHHHHHHHHHHHHTTSTTEEEEECCEEEEEECTTSCEEEEETTCCEEEEEEEEECCCCEEEC
T ss_pred c--CCCCCCHHHHHHHHHHHHHhcCCEEEEeeEEEEeeecCCCcEEEEECCCCEEEeCEEEEccCCcccc
Confidence 0 0001345556666666666654 55556666666554 45678889999999999999999986543
No 70
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.28 E-value=6.3e-11 Score=121.49 Aligned_cols=54 Identities=17% Similarity=0.185 Sum_probs=45.5
Q ss_pred HHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 173 ILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 173 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.+.+.|.+.+++.|++++ +++|+++..+++++ | +.+|++++||.||.|.|....
T Consensus 190 ~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v-V-~~~g~~~~ad~Vv~a~~~~~~ 244 (421)
T 3nrn_A 190 AVIDELERIIMENKGKILTRKEVVEINIEEKKV-Y-TRDNEEYSFDVAISNVGVRET 244 (421)
T ss_dssp HHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE-E-ETTCCEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE-E-EeCCcEEEeCEEEECCCHHHH
Confidence 456677777888999999 99999999888888 5 567788999999999997653
No 71
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=99.27 E-value=3.6e-11 Score=118.15 Aligned_cols=116 Identities=18% Similarity=0.177 Sum_probs=87.1
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
..++||+|||||+||+++|+.|++ .|++|+|||+. . .|.|... + .. ..
T Consensus 13 ~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~--~-----gg~~~~~----~------------~~--~~------ 60 (323)
T 3f8d_A 13 GEKFDVIIVGLGPAAYGAALYSAR-YMLKTLVIGET--P-----GGQLTEA----G------------IV--DD------ 60 (323)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESS--T-----TGGGGGC----C------------EE--CC------
T ss_pred CCccCEEEECccHHHHHHHHHHHH-CCCcEEEEecc--C-----CCeeccc----c------------cc--cc------
Confidence 346999999999999999999999 99999999975 1 1222110 0 00 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
-..+..+....+...+.+.+.+.|++++.++|++++.+++.+.+.+.+|.++.+|.||.|+|......
T Consensus 61 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i~~~~~~~~v~~~~g~~~~~d~lvlAtG~~~~~~ 128 (323)
T 3f8d_A 61 YLGLIEIQASDMIKVFNKHIEKYEVPVLLDIVEKIENRGDEFVVKTKRKGEFKADSVILGIGVKRRKL 128 (323)
T ss_dssp STTSTTEEHHHHHHHHHHHHHTTTCCEEESCEEEEEEC--CEEEEESSSCEEEEEEEEECCCCEECCC
T ss_pred cCCCCCCCHHHHHHHHHHHHHHcCCEEEEEEEEEEEecCCEEEEEECCCCEEEcCEEEECcCCCCccC
Confidence 00111255678888899999889999888899999988888899999888999999999999886543
No 72
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=99.27 E-value=2e-11 Score=120.26 Aligned_cols=128 Identities=20% Similarity=0.300 Sum_probs=84.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcc-cc----------hhHhhhhcCchhhhhhccCce
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNY-GV----------WVDEFEDIGLVDCLDKTWPMT 150 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~-g~----------~~~~l~~~~~~~~~~~~~~~~ 150 (503)
..|||+||||||+|+++|+.|++ + |++|+|||+.+..+..... +. ....++.+++.
T Consensus 78 ~~~DVvIVGgG~AGL~aA~~La~-~~~G~~V~LiEk~~~~GGg~~~~g~~~~~~~~~~~~~~~L~~~Gv~---------- 146 (344)
T 3jsk_A 78 AETDIVIVGAGSCGLSAAYVLST-LRPDLRITIVEAGVAPGGGAWLGGQLFSAMVMRKPADVFLDEVGVP---------- 146 (344)
T ss_dssp HBCSEEEECCSHHHHHHHHHHHH-HCTTSCEEEEESSSSCCTTTTCCBTTCCCEEEETTTHHHHHHHTCC----------
T ss_pred CcCCEEEECccHHHHHHHHHHHh-cCCCCEEEEEeCCCccCCccccCCccchhhhcchHHHHHHHHcCCc----------
Confidence 46999999999999999999999 7 9999999998654321100 00 01111122210
Q ss_pred EEEecCCcccccCCCccc-cCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeC-----------------C--EE-EEE
Q 010693 151 CVFINDHKTKYLDRPYGR-VSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQE-----------------F--ES-SIV 207 (503)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~-v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~-----------------~--~~-~v~ 207 (503)
+... ..+.. .+...+.+.|.+.+.+ .|++++ +++|+++..++ + .+ .|.
T Consensus 147 ---~~~~------G~~~~~~~~~d~~~~L~~~a~~~~gV~i~~~~~V~dLi~~~d~~~~~~~~~~g~~~~~g~~rV~GVv 217 (344)
T 3jsk_A 147 ---YEDE------GDYVVVKHAALFTSTVLSKVLQRPNVKLFNATTVEDLITRKHHAESSSSSDDGEAEDEAKVRIAGVV 217 (344)
T ss_dssp ---CEEC------SSEEEESCHHHHHHHHHHHHHTCTTEEEEETEEEEEEEEEEC----------------CCEEEEEEE
T ss_pred ---cccc------CCeEEEecHHHHHHHHHHHHHhCCCCEEEeCCEEEEEEecCCcccccccccccccccCCCceEeEEE
Confidence 0000 11212 2356777889998888 699999 89999998765 2 22 122
Q ss_pred e------C--------CCcEEEeceEEecCCCCccccc
Q 010693 208 C------D--------DGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 208 ~------~--------~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
+ . ++.+|+|++||+|||+.+.+++
T Consensus 218 ~~~~~v~~~g~~~~~~d~~~i~Ak~VV~ATG~~s~v~~ 255 (344)
T 3jsk_A 218 TNWTLVSMHHDDQSAMDPNTINAPVIISTTGHDGPFGA 255 (344)
T ss_dssp EEEHHHHTTSSSSSCCBCEEEECSEEEECCCSSSSSSC
T ss_pred eeeeeeeccCCcccccCceEEEcCEEEECCCCCchhhH
Confidence 2 1 2247999999999999998654
No 73
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=99.27 E-value=3.2e-11 Score=127.42 Aligned_cols=128 Identities=16% Similarity=0.191 Sum_probs=91.8
Q ss_pred CCcCcEEEECCCHHHHHHHHHHH-ccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCc---
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVS-SRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHK--- 158 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La-~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~--- 158 (503)
+..+||+|||||+||+++|..|+ + .|++|+|||+.+..+ |.|... .+++.....+...
T Consensus 6 ~~~~dVvIIGaG~aGl~aA~~L~~~-~G~~v~viE~~~~~G-----Gtw~~~------------~ypg~~~d~~s~~~~~ 67 (540)
T 3gwf_A 6 THTVDAVVIGAGFGGIYAVHKLHHE-LGLTTVGFDKADGPG-----GTWYWN------------RYPGALSDTESHLYRF 67 (540)
T ss_dssp CEEEEEEEECCSHHHHHHHHHHHHT-TCCCEEEEESSSSSC-----THHHHC------------CCTTCEEEEEGGGSSC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHc-CCCCEEEEECCCCCC-----Cccccc------------CCCCceecCCcceeee
Confidence 34699999999999999999999 8 999999999876433 233211 0111111000000
Q ss_pred --c----cccCCCccccCHHHHHHHHHHHHHhCCc--EEE-EeEEEEEEEeCC--EEEEEeCCCcEEEeceEEecCCCCc
Q 010693 159 --T----KYLDRPYGRVSRNILKTKLLENCVSNGV--KFH-KAKVWHVNHQEF--ESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 159 --~----~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
. ........+.++..+.+.+.+.+.+.|+ +++ +++|++++.+++ .+.|.+.+|++++||.||.|+|..|
T Consensus 68 ~~~~~~~~~~~~~~~~~~~~ei~~~l~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~~~V~~~~G~~i~ad~lV~AtG~~s 147 (540)
T 3gwf_A 68 SFDRDLLQESTWKTTYITQPEILEYLEDVVDRFDLRRHFKFGTEVTSALYLDDENLWEVTTDHGEVYRAKYVVNAVGLLS 147 (540)
T ss_dssp CSCHHHHHHCCCSBSEEEHHHHHHHHHHHHHHTTCGGGEEESCCEEEEEEETTTTEEEEEETTSCEEEEEEEEECCCSCC
T ss_pred ccccccccCCCCcccCCCHHHHHHHHHHHHHHcCCcceeEeccEEEEEEEeCCCCEEEEEEcCCCEEEeCEEEECCcccc
Confidence 0 0011122236788899999999988888 787 899999998765 8899999999999999999999765
Q ss_pred c
Q 010693 228 S 228 (503)
Q Consensus 228 ~ 228 (503)
.
T Consensus 148 ~ 148 (540)
T 3gwf_A 148 A 148 (540)
T ss_dssp S
T ss_pred c
Confidence 3
No 74
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.26 E-value=1e-10 Score=116.50 Aligned_cols=132 Identities=14% Similarity=0.129 Sum_probs=78.2
Q ss_pred CcEEEECCCHHHHHHHHHHHcc--CCCcEEEEcCCCCCCCCCcc-------------cc-h----hH---hhhhcCchhh
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSR--HSVKVCCVDPSPLSTWPNNY-------------GV-W----VD---EFEDIGLVDC 142 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~--~G~~V~viE~~~~~~~~~~~-------------g~-~----~~---~l~~~~~~~~ 142 (503)
+||+|||||++|+++|+.|++. .|++|+|||+.+..+..... |. + .. .+..+ ++..
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~~~~gg~~~~~~~~~~~~~~~d~g~~~~~~~~~~~~~~~~~-~~~~ 80 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKADDSGGRMTTACSPHNPQCTADLGAQYITCTPHYAKKHQRF-YDEL 80 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSSSSSCGGGCEEECSSCTTCEEESSCCCEEECSSHHHHTHHH-HHHH
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCceEEEEECCCCCccceeeeecCCCCCceEecCCceEEcCchHHHHHHHH-HHHH
Confidence 6999999999999999999872 59999999987644321000 00 0 00 00000 0000
Q ss_pred h----hhccCceEEEecCCcccccCCCccccC---HHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEE
Q 010693 143 L----DKTWPMTCVFINDHKTKYLDRPYGRVS---RNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEI 214 (503)
Q Consensus 143 ~----~~~~~~~~~~~~~~~~~~~~~~~~~v~---r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i 214 (503)
. ...|...... .. .......++. ...+.+.|.+. .|++++ +++|++++.+++++.|.+.+|+++
T Consensus 81 ~~~g~~~~~~~~~~~---~~--~~~~~~~~~~~~g~~~l~~~l~~~---~g~~i~~~~~V~~i~~~~~~~~v~~~~g~~~ 152 (342)
T 3qj4_A 81 LAYGVLRPLSSPIEG---MV--MKEGDCNFVAPQGISSIIKHYLKE---SGAEVYFRHRVTQINLRDDKWEVSKQTGSPE 152 (342)
T ss_dssp HHTTSCEECCSCEET---CC--C--CCEEEECTTCTTHHHHHHHHH---HTCEEESSCCEEEEEECSSSEEEEESSSCCE
T ss_pred HhCCCeecCchhhcc---ee--ccCCccceecCCCHHHHHHHHHHh---cCCEEEeCCEEEEEEEcCCEEEEEECCCCEE
Confidence 0 0112111100 00 0001111111 12344444443 389999 999999999888899999988889
Q ss_pred EeceEEecCCCC
Q 010693 215 KASLIVDASGFA 226 (503)
Q Consensus 215 ~a~~vI~A~G~~ 226 (503)
++|.||.|+...
T Consensus 153 ~ad~vV~A~p~~ 164 (342)
T 3qj4_A 153 QFDLIVLTMPVP 164 (342)
T ss_dssp EESEEEECSCHH
T ss_pred EcCEEEECCCHH
Confidence 999999999743
No 75
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.24 E-value=5.6e-10 Score=114.38 Aligned_cols=56 Identities=21% Similarity=0.252 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEeCCCcEEEeceEEecCCCCcc
Q 010693 172 NILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 172 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
..+.+.|.+.+.+.|++++ +++|++|..+++++. |.+ +|++++||.||.|+|....
T Consensus 196 ~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~~gv~~-~g~~~~ad~VV~a~~~~~~ 253 (425)
T 3ka7_A 196 KGIIDALETVISANGGKIHTGQEVSKILIENGKAAGIIA-DDRIHDADLVISNLGHAAT 253 (425)
T ss_dssp HHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEE-TTEEEECSEEEECSCHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEECCceeEEEEECCEEEEEEE-CCEEEECCEEEECCCHHHH
Confidence 3466677888888999999 999999999888876 555 4778999999999998654
No 76
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=99.22 E-value=7.1e-11 Score=116.59 Aligned_cols=117 Identities=21% Similarity=0.258 Sum_probs=85.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
..+||+||||||||+++|+.|++ .|++|+|||+.. . -|.|... ..+ .. ...
T Consensus 7 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~-~-----gg~~~~~---~~~---------------~~----~~~ 57 (325)
T 2q7v_A 7 HDYDVVIIGGGPAGLTAAIYTGR-AQLSTLILEKGM-P-----GGQIAWS---EEV---------------EN----FPG 57 (325)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC-T-----TGGGGGC---SCB---------------CC----STT
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-cCCcEEEEeCCC-C-----Ccccccc---ccc---------------cc----CCC
Confidence 46999999999999999999999 999999999862 1 1222100 000 00 000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEe--CCE-EEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQ--EFE-SSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~--~~~-~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
.+. .+.+..+.+.+.+.+.+.|++++..+|++++.+ ++. +.|.+.+|+++.+|.||.|+|..+...
T Consensus 58 ~~~-~~~~~~~~~~l~~~~~~~gv~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~vv~AtG~~~~~~ 126 (325)
T 2q7v_A 58 FPE-PIAGMELAQRMHQQAEKFGAKVEMDEVQGVQHDATSHPYPFTVRGYNGEYRAKAVILATGADPRKL 126 (325)
T ss_dssp CSS-CBCHHHHHHHHHHHHHHTTCEEEECCEEEEEECTTSSSCCEEEEESSCEEEEEEEEECCCEEECCC
T ss_pred CCC-CCCHHHHHHHHHHHHHHcCCEEEeeeEEEEEeccCCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 011 256778888898989889999987789999876 443 677777888999999999999876543
No 77
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=99.22 E-value=4.5e-11 Score=118.31 Aligned_cols=124 Identities=17% Similarity=0.203 Sum_probs=87.6
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccc
Q 010693 81 SDRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTK 160 (503)
Q Consensus 81 ~~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (503)
.....+||+||||||+|+++|+.|++ .|++|+|||+.+.... ..-|.|... . ....
T Consensus 18 ~~~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~vie~~~~~~~-~~gg~~~~~----~--------------~~~~---- 73 (338)
T 3itj_A 18 GSHVHNKVTIIGSGPAAHTAAIYLAR-AEIKPILYEGMMANGI-AAGGQLTTT----T--------------EIEN---- 73 (338)
T ss_dssp ---CEEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSSBTTB-CTTCGGGGS----S--------------EECC----
T ss_pred CCCCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEecCCCCCC-CcCcccccc----h--------------hhcc----
Confidence 44567999999999999999999999 9999999998651110 011222110 0 0000
Q ss_pred ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC---CCcEEEeceEEecCCCCcccc
Q 010693 161 YLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD---DGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 161 ~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~~i~a~~vI~A~G~~s~vr 230 (503)
....+. .+....+...+.+.+.+.|++++ ++ |++++.+++.+.+.+. ++.++.+|.||.|+|..+...
T Consensus 74 ~~~~~~-~~~~~~~~~~~~~~~~~~gv~i~~~~-v~~i~~~~~~~~v~~~~~~~~~~~~~d~vvlAtG~~~~~~ 145 (338)
T 3itj_A 74 FPGFPD-GLTGSELMDRMREQSTKFGTEIITET-VSKVDLSSKPFKLWTEFNEDAEPVTTDAIILATGASAKRM 145 (338)
T ss_dssp STTCTT-CEEHHHHHHHHHHHHHHTTCEEECSC-EEEEECSSSSEEEEETTCSSSCCEEEEEEEECCCEEECCC
T ss_pred cCCCcc-cCCHHHHHHHHHHHHHHcCCEEEEeE-EEEEEEcCCEEEEEEEecCCCcEEEeCEEEECcCCCcCCC
Confidence 000011 25678888999999999999999 66 9999988888888873 667899999999999876543
No 78
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=99.22 E-value=2.7e-11 Score=118.60 Aligned_cols=136 Identities=21% Similarity=0.274 Sum_probs=84.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCc----hhhhhhccCceEEEecC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGL----VDCLDKTWPMTCVFIND 156 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~----~~~~~~~~~~~~~~~~~ 156 (503)
...+||+||||||+|+++|+.|++ . |++|+|+|+.+..+....++... +....+ ...+. .+.. .+..
T Consensus 63 ~~~~dv~IiG~G~aGl~aA~~la~-~~~g~~V~v~e~~~~~ggg~~~~g~~--~~~~~~~~~~~~~L~-~~Gv---~~~~ 135 (326)
T 2gjc_A 63 FAVSDVIIVGAGSSGLSAAYVIAK-NRPDLKVCIIESSVAPGGGSWLGGQL--FSAMVMRKPAHLFLQ-ELEI---PYED 135 (326)
T ss_dssp TTEESEEEECCSHHHHHHHHHHHH-HCTTSCEEEECSSSSCCTTTTCCGGG--CCCEEEETTTHHHHH-HTTC---CCEE
T ss_pred cCcCCEEEECccHHHHHHHHHHHh-cCCCCeEEEEecCccccccccccCcc--cchhhhhhHHHHHHH-hhCc---cccc
Confidence 346899999999999999999999 8 99999999987654221111100 000000 00000 0000 0000
Q ss_pred CcccccCCCccc-cCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeC----C--EE-EEEe--------------CCCc
Q 010693 157 HKTKYLDRPYGR-VSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQE----F--ES-SIVC--------------DDGN 212 (503)
Q Consensus 157 ~~~~~~~~~~~~-v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~----~--~~-~v~~--------------~~g~ 212 (503)
. ..+.. .+...+...|.+.+.+ .|++++ +++|+++..++ + .+ .|.+ .++.
T Consensus 136 ~------g~~~~~~~~~~~~~~L~~~a~~~~GV~i~~~~~V~~Ll~~~~~~~g~~rV~GVvv~~~~v~~~g~~~~~~d~~ 209 (326)
T 2gjc_A 136 E------GDYVVVKHAALFISTVLSKVLQLPNVKLFNATCVEDLVTRPPTEKGEVTVAGVVTNWTLVTQAHGTQCCMDPN 209 (326)
T ss_dssp C------SSEEEESCHHHHHHHHHHHHHTSTTEEEETTEEEEEEEECCCC-----CEEEEEEEEHHHHTC---CCCCCCE
T ss_pred C------CCeEEEcchHHHHHHHHHHHHHhcCcEEEecceeeeeeecccccCCCcEEEEEEecceeecccccceeccCce
Confidence 0 11211 2456788889998888 599999 99999998763 2 22 2222 1345
Q ss_pred EEEe---------------ceEEecCCCCccccc
Q 010693 213 EIKA---------------SLIVDASGFASSFVE 231 (503)
Q Consensus 213 ~i~a---------------~~vI~A~G~~s~vr~ 231 (503)
++.| ++||+|+|+.+++..
T Consensus 210 ~I~A~G~~~~~~~~~~~~~~~VV~ATG~~~~~~~ 243 (326)
T 2gjc_A 210 VIELAGYKNDGTRDLSQKHGVILSTTGHDGPFGA 243 (326)
T ss_dssp EEEESCCCSSSCCCSSTTCCEEEECCCCC--CCS
T ss_pred EEEEeeccccccccccccCCEEEECcCCCchHHH
Confidence 7999 999999999997765
No 79
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=99.22 E-value=3.6e-11 Score=124.40 Aligned_cols=140 Identities=11% Similarity=0.078 Sum_probs=88.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCCCCCCCCcccchhHhhhhcCch---hh-----h----------
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSPLSTWPNNYGVWVDEFEDIGLV---DC-----L---------- 143 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~~~~~~~~~g~~~~~l~~~~~~---~~-----~---------- 143 (503)
..+||+||||||+|+++|..|++ .|+ +|+|||+.+..+..-.+...... .+++. .. +
T Consensus 5 ~~~dV~IIGaG~aGl~aA~~L~~-~G~~~~V~v~E~~~~~GG~~~~~~~~~~--~~~ip~~~~~~~~~~~~~g~~~~~~~ 81 (447)
T 2gv8_A 5 TIRKIAIIGAGPSGLVTAKALLA-EKAFDQVTLFERRGSPGGVWNYTSTLSN--KLPVPSTNPILTTEPIVGPAALPVYP 81 (447)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHT-TTCCSEEEEECSSSSSSTTCSCCSCCCS--CCCSSBCCTTCCCCCBCCSSSCCBCC
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCCCeEEEecCCCCCCeecCCCCCCc--ccccccccccccccccccccccCCcc
Confidence 46899999999999999999999 999 99999987654311111000000 00000 00 0
Q ss_pred hhccCceEE-------EecCCcccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCC---Cc
Q 010693 144 DKTWPMTCV-------FINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDD---GN 212 (503)
Q Consensus 144 ~~~~~~~~~-------~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~---g~ 212 (503)
...+..... .+.+.. .......++.+..+.+.|.+.+...+..++ +++|++++.+++.+.|++.+ |+
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~t~V~~v~~~~~~~~V~~~~~~~G~ 159 (447)
T 2gv8_A 82 SPLYRDLQTNTPIELMGYCDQS--FKPQTLQFPHRHTIQEYQRIYAQPLLPFIKLATDVLDIEKKDGSWVVTYKGTKAGS 159 (447)
T ss_dssp CCCCTTCBCSSCHHHHSCTTCC--CCTTCCSSCBHHHHHHHHHHHHGGGGGGEECSEEEEEEEEETTEEEEEEEESSTTC
T ss_pred CchhhhhccCCCHHHhccCCCC--CCCCCCCCCCHHHHHHHHHHHHHHhhCeEEeCCEEEEEEeCCCeEEEEEeecCCCC
Confidence 000000000 000000 000011235688899999988887778888 99999999888888888765 66
Q ss_pred ---EEEeceEEecCCCCcc
Q 010693 213 ---EIKASLIVDASGFASS 228 (503)
Q Consensus 213 ---~i~a~~vI~A~G~~s~ 228 (503)
++.+|.||.|+|.+|.
T Consensus 160 ~~~~~~~d~VVvAtG~~s~ 178 (447)
T 2gv8_A 160 PISKDIFDAVSICNGHYEV 178 (447)
T ss_dssp CEEEEEESEEEECCCSSSS
T ss_pred eeEEEEeCEEEECCCCCCC
Confidence 7999999999999764
No 80
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=99.21 E-value=6e-11 Score=116.33 Aligned_cols=120 Identities=18% Similarity=0.217 Sum_probs=84.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.|||+||||||||++||+.|++ .|++|+|||+.+..+... .|.... .. .+ .+. ...
T Consensus 4 ~yDvvIIG~GpAGl~AA~~la~-~g~~v~liE~~~~gg~~~-~G~~~~---~~-------------~i--~~~----~g~ 59 (314)
T 4a5l_A 4 IHDVVIIGSGPAAHTAAIYLGR-SSLKPVMYEGFMAGGVAA-GGQLTT---TT-------------II--ENF----PGF 59 (314)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSSGGGCCT-TCGGGG---SS-------------EE--CCS----TTC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCCEEEEecCCCCCccc-CCCcCC---hH-------------Hh--hhc----cCC
Confidence 5999999999999999999999 999999999764322111 111100 00 00 000 000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
+. .++...+...+.+.+...++++....+.......+...+.+.++.++.+|.||.|+|...+.
T Consensus 60 ~~-~i~~~~l~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~liiATG~~~~~ 123 (314)
T 4a5l_A 60 PN-GIDGNELMMNMRTQSEKYGTTIITETIDHVDFSTQPFKLFTEEGKEVLTKSVIIATGATAKR 123 (314)
T ss_dssp TT-CEEHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEEEETTCCEEEEEEEEECCCEEECC
T ss_pred cc-cCCHHHHHHHHHHHHhhcCcEEEEeEEEEeecCCCceEEEECCCeEEEEeEEEEcccccccc
Confidence 11 14566777888888888999988667777777777777888888899999999999976543
No 81
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=99.21 E-value=3.9e-11 Score=127.91 Aligned_cols=145 Identities=17% Similarity=0.178 Sum_probs=89.9
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcc---cchh---HhhhhcCch---------------
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNY---GVWV---DEFEDIGLV--------------- 140 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~---g~~~---~~l~~~~~~--------------- 140 (503)
....+||||||||++|+++|+.|++ +|++|+|||+.+..+..... +.+. ......++.
T Consensus 118 ~~~~~DVvVVG~G~aGl~aA~~la~-~G~~V~vlEk~~~~gg~s~~s~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~~~ 196 (566)
T 1qo8_A 118 PSETTQVLVVGAGSAGFNASLAAKK-AGANVILVDKAPFSGGNSMISAGGMNAVGTKQQTAHGVEDKVEWFIEDAMKGGR 196 (566)
T ss_dssp CSEEEEEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCCCCCCcccccCceeEccCCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 4467999999999999999999999 99999999998765321111 1100 000111110
Q ss_pred -----hhh---------------hhccCceEEEecCCcccccCCCc----cccCHHHHHHHHHHHHHhCCcEEE-EeEEE
Q 010693 141 -----DCL---------------DKTWPMTCVFINDHKTKYLDRPY----GRVSRNILKTKLLENCVSNGVKFH-KAKVW 195 (503)
Q Consensus 141 -----~~~---------------~~~~~~~~~~~~~~~~~~~~~~~----~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~ 195 (503)
..+ .....-..+...... .....+ +.+....+.+.|.+.+++.|++++ +++|+
T Consensus 197 ~~~~~~~~~~~~~~~~~~i~~l~~~Gv~~~~~~~~~g~--~~~r~~~~~~~~~~~~~l~~~L~~~~~~~gv~i~~~~~v~ 274 (566)
T 1qo8_A 197 QQNDIKLVTILAEQSADGVQWLESLGANLDDLKRSGGA--RVDRTHRPHGGKSSGPEIIDTLRKAAKEQGIDTRLNSRVV 274 (566)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTC--SSCCEEECSSSSCHHHHHHHHHHHHHHHTTCCEECSEEEE
T ss_pred CCCCHHHHHHHHhccHHHHHHHHhcCCccccccccCCC--CCCceeecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEEE
Confidence 000 000000000000000 000000 113467889999999999999999 99999
Q ss_pred EEEEeC-CEEE-EEe--CCCc--EEEeceEEecCCCCccc
Q 010693 196 HVNHQE-FESS-IVC--DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 196 ~i~~~~-~~~~-v~~--~~g~--~i~a~~vI~A~G~~s~v 229 (503)
++..++ +.+. |++ .+|+ +++|+.||+|+|..+..
T Consensus 275 ~l~~~~~g~v~Gv~~~~~~g~~~~i~A~~VVlAtGg~s~~ 314 (566)
T 1qo8_A 275 KLVVNDDHSVVGAVVHGKHTGYYMIGAKSVVLATGGYGMN 314 (566)
T ss_dssp EEEECTTSBEEEEEEEETTTEEEEEEEEEEEECCCCCTTC
T ss_pred EEEECCCCcEEEEEEEeCCCcEEEEEcCEEEEecCCcccC
Confidence 999877 6432 333 3675 69999999999988864
No 82
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=99.21 E-value=7.4e-11 Score=116.45 Aligned_cols=116 Identities=20% Similarity=0.248 Sum_probs=87.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
..+||+|||||+||+++|+.|++ .|++|+|||+.+..+ |.|... ++...+. + .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~~g-----G~~~~~-------------~~~~~~~--~------~ 58 (332)
T 3lzw_A 6 KVYDITIIGGGPVGLFTAFYGGM-RQASVKIIESLPQLG-----GQLSAL-------------YPEKYIY--D------V 58 (332)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC-----HHHHHH-------------CTTSEEC--C------S
T ss_pred ccceEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCCCCC-----ceehhc-------------CCCceEe--c------c
Confidence 45899999999999999999999 999999999876422 233211 0110000 0 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEEEEeCCCcEEEeceEEecCCCCc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
..+..+....+...+.+.+.+.|++++ +++|++++.+++ .+.|.+.+|+ +.+|.||.|+|..+
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~v~~~~g~-~~~d~vVlAtG~~~ 123 (332)
T 3lzw_A 59 AGFPKIRAQELINNLKEQMAKFDQTICLEQAVESVEKQADGVFKLVTNEET-HYSKTVIITAGNGA 123 (332)
T ss_dssp TTCSSEEHHHHHHHHHHHHTTSCCEEECSCCEEEEEECTTSCEEEEESSEE-EEEEEEEECCTTSC
T ss_pred CCCCCCCHHHHHHHHHHHHHHhCCcEEccCEEEEEEECCCCcEEEEECCCE-EEeCEEEECCCCCc
Confidence 011124578888999999988999999 899999998876 7888888876 99999999999954
No 83
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.20 E-value=4.8e-10 Score=115.12 Aligned_cols=43 Identities=12% Similarity=0.165 Sum_probs=37.5
Q ss_pred HhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCC
Q 010693 183 VSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFA 226 (503)
Q Consensus 183 ~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~ 226 (503)
++.| +++ +++|++|+.+++++.|++.+|++++||.||.|.|..
T Consensus 215 ~~~g-~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vi~a~~~~ 258 (431)
T 3k7m_X 215 QEIP-EIRLQTVVTGIDQSGDVVNVTVKDGHAFQAHSVIVATPMN 258 (431)
T ss_dssp TTCS-CEESSCCEEEEECSSSSEEEEETTSCCEEEEEEEECSCGG
T ss_pred hhCC-ceEeCCEEEEEEEcCCeEEEEECCCCEEEeCEEEEecCcc
Confidence 3456 899 999999998888899999999889999999999943
No 84
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.19 E-value=1.2e-09 Score=113.58 Aligned_cols=40 Identities=8% Similarity=0.117 Sum_probs=36.2
Q ss_pred cEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 187 VKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 187 v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
++++ +++|++|+.+++++.|++.+| +++||.||.|.+...
T Consensus 249 ~~i~~~~~V~~i~~~~~~~~v~~~~g-~~~ad~vV~a~p~~~ 289 (475)
T 3lov_A 249 SEIRLETPLLAISREDGRYRLKTDHG-PEYADYVLLTIPHPQ 289 (475)
T ss_dssp CEEESSCCCCEEEEETTEEEEECTTC-CEEESEEEECSCHHH
T ss_pred CEEEcCCeeeEEEEeCCEEEEEECCC-eEECCEEEECCCHHH
Confidence 6898 999999999998999999888 799999999998654
No 85
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=99.18 E-value=1.1e-10 Score=123.62 Aligned_cols=135 Identities=19% Similarity=0.222 Sum_probs=90.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhh-hccCceEEEecCCcccc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLD-KTWPMTCVFINDHKTKY 161 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 161 (503)
...+||+|||||+||+++|+.|++ .|++|+|||+.+..+ |.|... ..-+....+. ..+. +.+.......
T Consensus 19 ~~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~~~G-----Gtw~~~-~ypg~~~dv~s~~y~---~~f~~~~~~~ 88 (549)
T 4ap3_A 19 TTSYDVVVVGAGIAGLYAIHRFRS-QGLTVRAFEAASGVG-----GVWYWN-RYPGARCDVESIDYS---YSFSPELEQE 88 (549)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC-----THHHHC-CCTTCBCSSCTTTSS---CCSCHHHHHH
T ss_pred CCCCCEEEECchHHHHHHHHHHHh-CCCCEEEEeCCCCCC-----CccccC-CCCCceeCCCchhcc---cccccccccC
Confidence 456999999999999999999999 999999999876433 223211 0000000000 0000 0000000000
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCc--EEE-EeEEEEEEEeCC--EEEEEeCCCcEEEeceEEecCCCCc
Q 010693 162 LDRPYGRVSRNILKTKLLENCVSNGV--KFH-KAKVWHVNHQEF--ESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 162 ~~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
......+.++..+.+.+.+.+.+.|+ +++ +++|++++.+++ .+.|.+.+|++++||.||.|+|..|
T Consensus 89 ~~~~~~~~~~~ei~~yl~~~~~~~g~~~~i~~~~~V~~i~~~~~~~~w~V~~~~G~~i~ad~lV~AtG~~s 159 (549)
T 4ap3_A 89 WNWSEKYATQPEILAYLEHVADRFDLRRDIRFDTRVTSAVLDEEGLRWTVRTDRGDEVSARFLVVAAGPLS 159 (549)
T ss_dssp CCCSSSSCBHHHHHHHHHHHHHHTTCGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSEE
T ss_pred CCCccCCCCHHHHHHHHHHHHHHcCCCccEEECCEEEEEEEcCCCCEEEEEECCCCEEEeCEEEECcCCCC
Confidence 11111235788899999999988887 788 899999988765 8899999999999999999999755
No 86
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=99.18 E-value=1.2e-10 Score=124.33 Aligned_cols=144 Identities=17% Similarity=0.192 Sum_probs=88.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcc---cchh---HhhhhcCchh--------------
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNY---GVWV---DEFEDIGLVD-------------- 141 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~---g~~~---~~l~~~~~~~-------------- 141 (503)
....+||+|||||+||+++|+.|++ +|++|+|||+.+..+....+ +.+. .....+++.+
T Consensus 123 ~~~~~DVvVVGaG~aGl~aA~~la~-~G~~V~vlEk~~~~gg~s~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~ 201 (571)
T 1y0p_A 123 PHDTVDVVVVGSGGAGFSAAISATD-SGAKVILIEKEPVIGGNAKLAAGGMNAAWTDQQKAKKITDSPELMFEDTMKGGQ 201 (571)
T ss_dssp CSEECSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSCTTGGGCCSCEECSSCHHHHHTTCCCCHHHHHHHHHHHTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCCCCCCchhhcCceEEeCCCHHHHHhCCCCCHHHHHHHHHHhcC
Confidence 3447999999999999999999999 99999999998765422111 1100 0011111100
Q ss_pred ------hhh----h---------ccC--ceEEEecCCcccccCCCc----cccCHHHHHHHHHHHHHhCCcEEE-EeEEE
Q 010693 142 ------CLD----K---------TWP--MTCVFINDHKTKYLDRPY----GRVSRNILKTKLLENCVSNGVKFH-KAKVW 195 (503)
Q Consensus 142 ------~~~----~---------~~~--~~~~~~~~~~~~~~~~~~----~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~ 195 (503)
.+. . .+. -..+....+. .....+ +......+.+.|.+.+.+.|++++ +++|+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~g~--~~~r~~~~~~g~~~g~~l~~~L~~~~~~~gv~i~~~~~v~ 279 (571)
T 1y0p_A 202 NINDPALVKVLSSHSKDSVDWMTAMGADLTDVGMMGGA--SVNRAHRPTGGAGVGAHVVQVLYDNAVKRNIDLRMNTRGI 279 (571)
T ss_dssp TCSCHHHHHHHHHHHHHHHHHHHHTTCCCCEEECCTTC--SSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEE
T ss_pred CCCCHHHHHHHHHccHHHHHHHHhcCCCCccCcccCCc--CCCeeEecCCCCCCHHHHHHHHHHHHHhcCCEEEeCCEee
Confidence 000 0 000 0000000000 000000 113357888999999999999999 99999
Q ss_pred EEEEeC-CEE---EEEeCCCc--EEEeceEEecCCCCcc
Q 010693 196 HVNHQE-FES---SIVCDDGN--EIKASLIVDASGFASS 228 (503)
Q Consensus 196 ~i~~~~-~~~---~v~~~~g~--~i~a~~vI~A~G~~s~ 228 (503)
++..++ +.+ .+...+|+ ++.||.||+|+|..+.
T Consensus 280 ~l~~~~~g~v~Gv~~~~~~g~~~~i~a~~VVlAtGg~~~ 318 (571)
T 1y0p_A 280 EVLKDDKGTVKGILVKGMYKGYYWVKADAVILATGGFAK 318 (571)
T ss_dssp EEEECTTSCEEEEEEEETTTEEEEEECSEEEECCCCCTT
T ss_pred EeEEcCCCeEEEEEEEeCCCcEEEEECCeEEEeCCCccc
Confidence 999876 543 33333665 6999999999998774
No 87
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=99.17 E-value=2.3e-10 Score=121.30 Aligned_cols=135 Identities=15% Similarity=0.135 Sum_probs=88.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHh-hhhcCchhhhhhccCceEEEecCCccccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDE-FEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
..+||+|||||++|+++|+.|++ .|++|+|||+.+..+ |.|... ......+ .-...+ . +.+........
T Consensus 15 ~~~dVvIIGaG~aGl~aA~~L~~-~G~~v~iiE~~~~~G-----G~w~~~~~pg~~~d-~~~~~~-~--~~f~~~~~~~~ 84 (542)
T 1w4x_A 15 EEVDVLVVGAGFSGLYALYRLRE-LGRSVHVIETAGDVG-----GVWYWNRYPGARCD-IESIEY-C--YSFSEEVLQEW 84 (542)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC-----THHHHCCCTTCBCS-SCTTTS-S--CCSCHHHHHHC
T ss_pred CCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCCCCC-----CcccccCCCceeec-cccccc-c--cccChhhhhcc
Confidence 46999999999999999999999 999999999876543 223210 0000000 000000 0 00000000001
Q ss_pred CCCccccCHHHHHHHHHHHHHhCC--cEEE-EeEEEEEEEeCC--EEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNG--VKFH-KAKVWHVNHQEF--ESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~g--v~~~-~~~v~~i~~~~~--~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.....+..+..+.+.|.+.+.+.+ ++++ +++|++++.+++ .+.|++++|++++||.||.|+|..|.
T Consensus 85 ~~~~~~~~~~~i~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~vV~AtG~~s~ 155 (542)
T 1w4x_A 85 NWTERYASQPEILRYINFVADKFDLRSGITFHTTVTAAAFDEATNTWTVDTNHGDRIRARYLIMASGQLSV 155 (542)
T ss_dssp CCCBSSCBHHHHHHHHHHHHHHTTGGGGEECSCCEEEEEEETTTTEEEEEETTCCEEEEEEEEECCCSCCC
T ss_pred CcccccCCHHHHHHHHHHHHHHcCCCceEEcCcEEEEEEEcCCCCeEEEEECCCCEEEeCEEEECcCCCCC
Confidence 111123567888888888777765 5688 899999988753 78899999989999999999998764
No 88
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=99.16 E-value=4.2e-11 Score=120.31 Aligned_cols=138 Identities=14% Similarity=0.145 Sum_probs=86.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCCCCCCCCcccchhHhhhhcCchhh-hhhccCceEEEecCC-ccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDC-LDKTWPMTCVFINDH-KTK 160 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~-~~~ 160 (503)
.++||+|||||+||+++|..|++ .|+ +|+|||+.+ .+ ..|..|.... .-+... ....++...+..... ...
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~-~g~~~v~lie~~~-~G--g~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~ 76 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKD-FGITDVIILEKGT-VG--HSFKHWPKST--RTITPSFTSNGFGMPDMNAISMDTSP 76 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSS-TT--HHHHTSCTTC--BCSSCCCCCGGGTCCCTTCSSTTCCH
T ss_pred ccCcEEEECcCHHHHHHHHHHHH-cCCCcEEEEecCC-CC--CccccCcccc--cccCcchhcccCCchhhhhccccccc
Confidence 46899999999999999999999 999 999999875 21 1111110000 000000 000000000000000 000
Q ss_pred ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 161 YLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 161 ~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
........+.+..+...+.+.+.+.|++++ +++|++++.+++.+.|.+.+| ++.+|.||.|+|..+.
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g-~~~~d~vVlAtG~~~~ 144 (369)
T 3d1c_A 77 AFTFNEEHISGETYAEYLQVVANHYELNIFENTVVTNISADDAYYTIATTTE-TYHADYIFVATGDYNF 144 (369)
T ss_dssp HHHHCCSSCBHHHHHHHHHHHHHHTTCEEECSCCEEEEEECSSSEEEEESSC-CEEEEEEEECCCSTTS
T ss_pred cccccccCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEECCCeEEEEeCCC-EEEeCEEEECCCCCCc
Confidence 000011135677888888888888999999 899999998877788888777 5999999999998763
No 89
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=99.16 E-value=7e-11 Score=116.96 Aligned_cols=120 Identities=18% Similarity=0.153 Sum_probs=85.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcc-cchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNY-GVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~-g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
..+||+||||||+|+++|+.|++ .|++|+|||+..... ... |.+... ..+ .. ..
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~-~g~~v~lie~~~~~~--~~~gg~~~~~----------------~~~--~~----~~ 61 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAAR-AELKPLLFEGWMAND--IAPGGQLTTT----------------TDV--EN----FP 61 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCCEEECCSSBTT--BCTTCGGGGC----------------SEE--CC----ST
T ss_pred CCCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeccCccc--cCCCceeeec----------------ccc--cc----CC
Confidence 46899999999999999999999 999999999721000 011 111000 000 00 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
..+. .+++..+...+.+.+.+.|++++ ++ |++++.+++.+.|.+ +|.++++|.||.|+|.++....
T Consensus 62 ~~~~-~~~~~~~~~~l~~~~~~~gv~~~~~~-v~~i~~~~~~~~v~~-~~~~~~~~~vv~A~G~~~~~~~ 128 (333)
T 1vdc_A 62 GFPE-GILGVELTDKFRKQSERFGTTIFTET-VTKVDFSSKPFKLFT-DSKAILADAVILAIGAVAKRLS 128 (333)
T ss_dssp TCTT-CEEHHHHHHHHHHHHHHTTCEEECCC-CCEEECSSSSEEEEC-SSEEEEEEEEEECCCEEECCCC
T ss_pred CCcc-CCCHHHHHHHHHHHHHHCCCEEEEeE-EEEEEEcCCEEEEEE-CCcEEEcCEEEECCCCCcCCCC
Confidence 0011 25677888889888888999999 65 999988777778877 7778999999999998876543
No 90
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=99.16 E-value=1.4e-10 Score=113.49 Aligned_cols=114 Identities=20% Similarity=0.244 Sum_probs=84.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
+|||+||||||||+++|..|++ .|++|+|||+.. -|.|... .++ .. ..
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~v~li~~~~-------gG~~~~~---~~~---------------~~----~~-- 48 (310)
T 1fl2_A 1 AYDVLIVGSGPAGAAAAIYSAR-KGIRTGLMGERF-------GGQILDT---VDI---------------EN----YI-- 48 (310)
T ss_dssp CEEEEEECCSHHHHHHHHHHHT-TTCCEEEECSST-------TGGGGGC---CEE---------------CC----BT--
T ss_pred CCCEEEECcCHHHHHHHHHHHH-CCCcEEEEeCCC-------Cceeccc---ccc---------------cc----cc--
Confidence 4899999999999999999999 999999998531 1222210 000 00 00
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC---CEEEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQE---FESSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~---~~~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
.....++..+.+.+.+.+.+.|++++ +++|+.++.+. +.+.|.+.+|+++.+|.||.|+|..+...
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~~~~~~v~~~~g~~~~~~~lv~AtG~~~~~~ 118 (310)
T 1fl2_A 49 SVPKTEGQKLAGALKVHVDEYDVDVIDSQSASKLIPAAVEGGLHQIETASGAVLKARSIIVATGAKWRNM 118 (310)
T ss_dssp TBSSEEHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTCCEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred CcCCCCHHHHHHHHHHHHHHcCCeEEccCEEEEEEecccCCceEEEEECCCCEEEeCEEEECcCCCcCCC
Confidence 01124567788888888888999999 78999997653 36788888888999999999999876543
No 91
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.13 E-value=1.1e-09 Score=114.11 Aligned_cols=53 Identities=17% Similarity=0.123 Sum_probs=43.3
Q ss_pred HHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE-EEEEeCCCcEEEeceEEecCCCCc
Q 010693 174 LKTKLLENCVSNGVKFH-KAKVWHVNHQEFE-SSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 174 l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+.+.|.+.+.+.|++++ +++|++|..++++ +.|.+ ++.++.||.||.|.+...
T Consensus 236 l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~v~~-~~~~~~ad~vv~a~p~~~ 290 (477)
T 3nks_A 236 LPQALETHLTSRGVSVLRGQPVCGLSLQAEGRWKVSL-RDSSLEADHVISAIPASV 290 (477)
T ss_dssp HHHHHHHHHHHTTCEEECSCCCCEEEECGGGCEEEEC-SSCEEEESEEEECSCHHH
T ss_pred HHHHHHHHHHhcCCEEEeCCEEEEEEEcCCceEEEEE-CCeEEEcCEEEECCCHHH
Confidence 56677777778899999 9999999987765 77766 455799999999998654
No 92
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=99.12 E-value=2.8e-10 Score=112.88 Aligned_cols=115 Identities=20% Similarity=0.273 Sum_probs=83.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
+..+||+||||||||+++|+.|++ .|++|+|||+... .|.|... . .. . ..
T Consensus 12 ~~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~------gg~~~~~--~-~~-------------------~-~~ 61 (335)
T 2a87_A 12 HPVRDVIVIGSGPAGYTAALYAAR-AQLAPLVFEGTSF------GGALMTT--T-DV-------------------E-NY 61 (335)
T ss_dssp CCCEEEEEECCHHHHHHHHHHHHH-TTCCCEEECCSSC------SCGGGSC--S-CB-------------------C-CS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCC------CCceecc--c-hh-------------------h-hc
Confidence 456999999999999999999999 9999999996411 1111100 0 00 0 00
Q ss_pred CCCcc-ccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEE-EeCCCcEEEeceEEecCCCCcccc
Q 010693 163 DRPYG-RVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSI-VCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 163 ~~~~~-~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v-~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
..+. .+.+..+...+.+.+.+.|++++ ++ |++++. ++.+.| .+.+|+++.+|.||.|+|..+...
T Consensus 62 -~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~-v~~i~~-~~~~~v~~~~~g~~~~~d~lviAtG~~~~~~ 129 (335)
T 2a87_A 62 -PGFRNGITGPELMDEMREQALRFGADLRMED-VESVSL-HGPLKSVVTADGQTHRARAVILAMGAAARYL 129 (335)
T ss_dssp -TTCTTCBCHHHHHHHHHHHHHHTTCEEECCC-EEEEEC-SSSSEEEEETTSCEEEEEEEEECCCEEECCC
T ss_pred -CCCCCCCCHHHHHHHHHHHHHHcCCEEEEee-EEEEEe-CCcEEEEEeCCCCEEEeCEEEECCCCCccCC
Confidence 0111 25677888888888888999999 55 888887 555667 777888999999999999876543
No 93
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=99.12 E-value=1.8e-10 Score=121.92 Aligned_cols=133 Identities=14% Similarity=0.150 Sum_probs=89.7
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHh-hhh--cCch-hhhhhccCceEEEecCCc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDE-FED--IGLV-DCLDKTWPMTCVFINDHK 158 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~-l~~--~~~~-~~~~~~~~~~~~~~~~~~ 158 (503)
+..+||+|||||+||+++|+.|++ .|++|+|||+++..+ |.|... ... .+.. ...... +....
T Consensus 7 ~~~~dVvIIGaG~aGl~aA~~L~~-~g~~v~iiE~~~~~G-----Gtw~~~~yPg~~~d~~~~~y~~~-------f~~~~ 73 (545)
T 3uox_A 7 SPALDAVVIGAGVTGIYQAFLINQ-AGMKVLGIEAGEDVG-----GTWYWNRYPGCRLDTESYAYGYF-------ALKGI 73 (545)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC-----THHHHCCCTTCBCSSCHHHHCHH-------HHTTS
T ss_pred CCCCCEEEECccHHHHHHHHHHHh-CCCCEEEEeCCCCCC-----CccccCCCCceeecCchhhcccc-------cCccc
Confidence 456999999999999999999999 999999999876443 223211 000 0000 000000 00000
Q ss_pred ccccCCCccccCHHHHHHHHHHHHHhCCc--EEE-EeEEEEEEEeC--CEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 159 TKYLDRPYGRVSRNILKTKLLENCVSNGV--KFH-KAKVWHVNHQE--FESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 159 ~~~~~~~~~~v~r~~l~~~L~~~~~~~gv--~~~-~~~v~~i~~~~--~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.........+..+..+...+.+.+.+.|+ .++ +++|++++.++ +.+.|++++|++++||.||.|+|..|.
T Consensus 74 ~~~~~~~~~~~~~~ei~~yl~~~~~~~~l~~~i~~~~~V~~~~~~~~~~~w~V~~~~G~~~~ad~lV~AtG~~s~ 148 (545)
T 3uox_A 74 IPEWEWSENFASQPEMLRYVNRAADAMDVRKHYRFNTRVTAARYVENDRLWEVTLDNEEVVTCRFLISATGPLSA 148 (545)
T ss_dssp STTCCCSBSSCBHHHHHHHHHHHHHHHTCGGGEECSCCEEEEEEEGGGTEEEEEETTTEEEEEEEEEECCCSCBC
T ss_pred ccCCCccccCCCHHHHHHHHHHHHHHcCCcCcEEECCEEEEEEEeCCCCEEEEEECCCCEEEeCEEEECcCCCCC
Confidence 00011122235678888889888888776 677 89999998765 488999999989999999999997553
No 94
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.10 E-value=4.3e-09 Score=109.55 Aligned_cols=39 Identities=21% Similarity=0.354 Sum_probs=33.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
...+||+|||||++||++|+.|++ +|++|+|+|+.+..+
T Consensus 14 ~~~~~v~iiG~G~~Gl~aa~~l~~-~g~~v~v~E~~~~~G 52 (478)
T 2ivd_A 14 TTGMNVAVVGGGISGLAVAHHLRS-RGTDAVLLESSARLG 52 (478)
T ss_dssp ---CCEEEECCBHHHHHHHHHHHT-TTCCEEEECSSSSSB
T ss_pred CCCCcEEEECCCHHHHHHHHHHHH-CCCCEEEEEcCCCCC
Confidence 346899999999999999999999 999999999987654
No 95
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=99.10 E-value=2.5e-10 Score=112.21 Aligned_cols=114 Identities=14% Similarity=0.192 Sum_probs=82.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
..+||+||||||||+++|+.|++ .|++|+|||+... .|.+... . .. . ..
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~lie~~~~------gg~~~~~--~-~~---------------~-----~~- 52 (320)
T 1trb_A 4 KHSKLLILGSGPAGYTAAVYAAR-ANLQPVLITGMEK------GGQLTTT--T-EV---------------E-----NW- 52 (320)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHT-TTCCCEEECCSST------TGGGGGC--S-BC---------------C-----CS-
T ss_pred CcCCEEEECcCHHHHHHHHHHHH-CCCcEEEEccCCC------CceEecc--h-hh---------------h-----hC-
Confidence 46899999999999999999999 9999999995311 1211100 0 00 0 00
Q ss_pred CCcc-ccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 164 RPYG-RVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 164 ~~~~-~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
..+. .+.+..+.+.+.+.+.+.|++++..+|+.++.+++.+.+ +.+|.++.+|.||.|+|..+..
T Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~v-~~~~~~~~~~~lv~AtG~~~~~ 118 (320)
T 1trb_A 53 PGDPNDLTGPLLMERMHEHATKFETEIIFDHINKVDLQNRPFRL-NGDNGEYTCDALIIATGASARY 118 (320)
T ss_dssp TTCCSSCBHHHHHHHHHHHHHHTTCEEECCCEEEEECSSSSEEE-EESSCEEEEEEEEECCCEEECC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCEEEEeeeeEEEecCCEEEE-EeCCCEEEcCEEEECCCCCcCC
Confidence 0111 145677888888888889999993349999887777777 6678889999999999987654
No 96
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=99.08 E-value=6.5e-10 Score=117.13 Aligned_cols=115 Identities=21% Similarity=0.241 Sum_probs=85.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
+..+||+||||||||+++|+.|++ .|++|+|+|+.. -|.|.. ..++.. ..
T Consensus 210 ~~~~dVvIIGgG~AGl~aA~~la~-~G~~v~lie~~~-------GG~~~~---~~~~~~-------------------~~ 259 (521)
T 1hyu_A 210 RDAYDVLIVGSGPAGAAAAVYSAR-KGIRTGLMGERF-------GGQVLD---TVDIEN-------------------YI 259 (521)
T ss_dssp SCCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSST-------TGGGTT---CSCBCC-------------------BT
T ss_pred cCcccEEEECCcHHHHHHHHHHHh-CCCeEEEEECCC-------CCcccc---cccccc-------------------cC
Confidence 457999999999999999999999 999999998521 122211 111100 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe---CCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ---EFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~---~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
.........+...+.+.+.+.|++++ +++|+.++.+ ++.+.|.+.+|.++.+|.||.|+|.++..
T Consensus 260 --~~~~~~~~~l~~~l~~~~~~~gv~v~~~~~v~~i~~~~~~~~~~~V~~~~g~~~~~d~vVlAtG~~~~~ 328 (521)
T 1hyu_A 260 --SVPKTEGQKLAGALKAHVSDYDVDVIDSQSASKLVPAATEGGLHQIETASGAVLKARSIIIATGAKWRN 328 (521)
T ss_dssp --TBSSBCHHHHHHHHHHHHHTSCEEEECSCCEEEEECCSSTTSCEEEEETTSCEEEEEEEEECCCEEECC
T ss_pred --CCCCCCHHHHHHHHHHHHHHcCCEEEcCCEEEEEEeccCCCceEEEEECCCCEEEcCEEEECCCCCcCC
Confidence 01124567788888888888999999 8899999754 23678888889899999999999987654
No 97
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=99.07 E-value=7.5e-11 Score=122.48 Aligned_cols=143 Identities=14% Similarity=0.142 Sum_probs=87.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCC-----CcEEEEcCCCCCCCCCcccchhHh--hhhcCchhhhhhccCceEEEe--
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHS-----VKVCCVDPSPLSTWPNNYGVWVDE--FEDIGLVDCLDKTWPMTCVFI-- 154 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G-----~~V~viE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~-- 154 (503)
..+||+||||||||+++|..|++ .| ++|+|||+.+..++... .+... ++..-+.+.+....+...+.+
T Consensus 29 ~~~dVvIIGaG~aGl~aA~~L~~-~g~~~~~~~v~liE~~~~~g~~~~--~~~~~~~~~~~~~~~l~~~~~p~~~~~~~~ 105 (463)
T 3s5w_A 29 VVHDLIGVGFGPSNIALAIALQE-RAQAQGALEVLFLDKQGDYRWHGN--TLVSQSELQISFLKDLVSLRNPTSPYSFVN 105 (463)
T ss_dssp CEESEEEECCSHHHHHHHHHHHH-HHHHHCCCCEEEEESCSSCCSSGG--GCCSSCBCSSCTTSSSSTTTCTTCTTSHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-cccccCcccEEEEecCCCCCCcCC--CCCCCCcCCcchhhccccccCCCCCCChhH
Confidence 46899999999999999999999 99 99999999886653221 11000 000000000000000000000
Q ss_pred ---cCCc-ccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe---CCE--EEEEeCCCc----EEEeceEE
Q 010693 155 ---NDHK-TKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ---EFE--SSIVCDDGN----EIKASLIV 220 (503)
Q Consensus 155 ---~~~~-~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~---~~~--~~v~~~~g~----~i~a~~vI 220 (503)
.... .........+..+..+.+.+...+...|++++ +++|++++.+ ++. +.|.+.+|. ++.+|.||
T Consensus 106 ~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~~~V~~i~~~~~~~~~~~~~V~~~~g~g~~~~~~~d~lV 185 (463)
T 3s5w_A 106 YLHKHDRLVDFINLGTFYPCRMEFNDYLRWVASHFQEQSRYGEEVLRIEPMLSAGQVEALRVISRNADGEELVRTTRALV 185 (463)
T ss_dssp HHHHTTCHHHHHHHCCSCCBHHHHHHHHHHHHTTCTTTEEESEEEEEEEEEEETTEEEEEEEEEEETTSCEEEEEESEEE
T ss_pred hhhhcCceeecccccCCCCCHHHHHHHHHHHHHHcCCeEEeCCEEEEEEEecCCCceEEEEEEEecCCCceEEEEeCEEE
Confidence 0000 00000011124678888888888888888888 8999999876 333 477777765 89999999
Q ss_pred ecCCCCccc
Q 010693 221 DASGFASSF 229 (503)
Q Consensus 221 ~A~G~~s~v 229 (503)
.|+|..+.+
T Consensus 186 lAtG~~p~~ 194 (463)
T 3s5w_A 186 VSPGGTPRI 194 (463)
T ss_dssp ECCCCEECC
T ss_pred ECCCCCCCC
Confidence 999985544
No 98
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.06 E-value=1.1e-07 Score=99.44 Aligned_cols=55 Identities=16% Similarity=0.254 Sum_probs=46.3
Q ss_pred HHHHHHHHHHHhCC-cEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 173 ILKTKLLENCVSNG-VKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 173 ~l~~~L~~~~~~~g-v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
.+.+.|.+.+.+.| ++++ +++|++|+.+++++.|++.+|++++||.||.|.|...
T Consensus 256 ~l~~~l~~~l~~~g~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 312 (495)
T 2vvm_A 256 AFARRFWEEAAGTGRLGYVFGCPVRSVVNERDAARVTARDGREFVAKRVVCTIPLNV 312 (495)
T ss_dssp HHHHHHHHHHHTTTCEEEESSCCEEEEEECSSSEEEEETTCCEEEEEEEEECCCGGG
T ss_pred HHHHHHHHHhhhcCceEEEeCCEEEEEEEcCCEEEEEECCCCEEEcCEEEECCCHHH
Confidence 44556666677777 9999 9999999988888999999988899999999999754
No 99
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=99.06 E-value=1.3e-09 Score=114.62 Aligned_cols=55 Identities=24% Similarity=0.269 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHhCCcEEE-EeEEEEEEEe-CCEE-EEEeC-CCc--EEEec-eEEecCCCCc
Q 010693 173 ILKTKLLENCVSNGVKFH-KAKVWHVNHQ-EFES-SIVCD-DGN--EIKAS-LIVDASGFAS 227 (503)
Q Consensus 173 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~-~v~~~-~g~--~i~a~-~vI~A~G~~s 227 (503)
.+.+.|.+.+++.|++++ +++|+++..+ ++.+ .|.+. +|+ +++|+ .||+|+|..+
T Consensus 203 ~l~~~L~~~~~~~Gv~i~~~t~v~~L~~~~~g~v~GV~~~~~g~~~~i~A~k~VVlAtGG~~ 264 (510)
T 4at0_A 203 MLMKPLVETAEKLGVRAEYDMRVQTLVTDDTGRVVGIVAKQYGKEVAVRARRGVVLATGSFA 264 (510)
T ss_dssp HHHHHHHHHHHHTTCEEECSEEEEEEEECTTCCEEEEEEEETTEEEEEEEEEEEEECCCCCT
T ss_pred HHHHHHHHHHHHcCCEEEecCEeEEEEECCCCcEEEEEEEECCcEEEEEeCCeEEEeCCChh
Confidence 788999999999999999 9999999987 4533 24333 333 59995 9999999876
No 100
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=99.05 E-value=8.3e-10 Score=108.27 Aligned_cols=113 Identities=20% Similarity=0.300 Sum_probs=73.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.+|||+||||||||++||+.|++ .|++|+|||++... |.+.. .+ ++. +.
T Consensus 5 ~~yDvvIIG~GpAGl~aA~~l~~-~g~~V~liE~~~~g------G~~~~----~~---~i~-----------~~------ 53 (312)
T 4gcm_A 5 IDFDIAIIGAGPAGMTAAVYASR-ANLKTVMIERGIPG------GQMAN----TE---EVE-----------NF------ 53 (312)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCTT------GGGGG----CS---CBC-----------CS------
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEecCCCC------Ceeec----cc---ccC-----------Cc------
Confidence 36999999999999999999999 99999999975321 11100 00 000 00
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
..+..+....+.....+...+.+..+. ...+....... ..+...+++++++|.+|.|+|.....
T Consensus 54 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~d~liiAtGs~~~~ 118 (312)
T 4gcm_A 54 PGFEMITGPDLSTKMFEHAKKFGAVYQYGDIKSVEDKGE--YKVINFGNKELTAKAVIIATGAEYKK 118 (312)
T ss_dssp TTCSSBCHHHHHHHHHHHHHHTTCEEEECCCCEEEECSS--CEEEECSSCEEEEEEEEECCCEEECC
T ss_pred CCccccchHHHHHHHHHHHhhccccccceeeeeeeeeec--ceeeccCCeEEEeceeEEcccCccCc
Confidence 011224455666666666767777776 44444433322 23445667899999999999976544
No 101
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.03 E-value=2.5e-08 Score=104.96 Aligned_cols=43 Identities=9% Similarity=0.034 Sum_probs=38.5
Q ss_pred CCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 185 NGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 185 ~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
.|++++ +++|++|..+++++.|.+.+|++++||.||.|.+...
T Consensus 225 lg~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~VI~a~p~~~ 268 (520)
T 1s3e_A 225 LGDRVKLERPVIYIDQTRENVLVETLNHEMYEAKYVISAIPPTL 268 (520)
T ss_dssp HGGGEESSCCEEEEECSSSSEEEEETTSCEEEESEEEECSCGGG
T ss_pred cCCcEEcCCeeEEEEECCCeEEEEECCCeEEEeCEEEECCCHHH
Confidence 378899 9999999988888889999998999999999998765
No 102
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=99.01 E-value=3.1e-10 Score=117.88 Aligned_cols=136 Identities=17% Similarity=0.183 Sum_probs=79.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchh--HhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWV--DEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
++||+||||||||+++|..|++ .|++|+|||+.+..+...+.|+.. ..+...++.+.+........+. ... ..
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~-~G~~V~liE~~~~gG~~~~~g~~psk~ll~~~~~~~~~~~~~~~~g~~-~~~---~~ 77 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQ-LGLSTAIVEPKYWGGVCLNVGCIPSKALLRNAELVHIFTKDAKAFGIS-GEV---TF 77 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHTTTTTEE-ECC---EE
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHHHHHhcCCC-CCC---cc
Confidence 5899999999999999999999 999999999862110000011100 0111112111111011111111 000 00
Q ss_pred CCCccc-cC-----HHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCCcccc
Q 010693 163 DRPYGR-VS-----RNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFASSFV 230 (503)
Q Consensus 163 ~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~s~vr 230 (503)
.+.. .. ...+.+.+.+.+.+.|++++ ++.+. .+++.+.|.+.+| .++++|.||+|+|..+...
T Consensus 78 --~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~~g~~~~---id~~~v~V~~~~G~~~~~~~d~lViAtG~~~~~~ 149 (464)
T 2a8x_A 78 --DYGIAYDRSRKVAEGRVAGVHFLMKKNKITEIHGYGTF---ADANTLLVDLNDGGTESVTFDNAIIATGSSTRLV 149 (464)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEE---SSSSEEEEEETTSCCEEEEEEEEEECCCEEECCC
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE---ecCCeEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 0100 00 13345556667777899999 66543 3556788888888 6899999999999987553
No 103
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=99.00 E-value=5.6e-09 Score=111.24 Aligned_cols=144 Identities=22% Similarity=0.244 Sum_probs=86.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcc---cchh---HhhhhcCc-----------------
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNY---GVWV---DEFEDIGL----------------- 139 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~---g~~~---~~l~~~~~----------------- 139 (503)
...+||+|||+|++|+++|+.|++ .|++|+|||+.+..+....+ +.+. ......++
T Consensus 124 ~~~~~v~viG~G~aG~~aa~~~~~-~g~~v~~~e~~~~~~~~~~~a~gg~~~~~~~~~~~~g~~ds~~~~~~~~~~~g~~ 202 (572)
T 1d4d_A 124 KETTDVVIIGSGGAGLAAAVSARD-AGAKVILLEKEPIPGGNTKLAAGGMNAAETKPQAKLGIEDKKQIMIDDTMKGGRN 202 (572)
T ss_dssp CEECSEEEECCSHHHHHHHHHHHS-SSCCEEEECSSSSSCTTGGGCCSCEECCSSSTTGGGTCCCCTHHHHHHHHHHTTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHH-CCCcEEEEecCCCCCcchhhhCCeeEccCCHHHHHhCCCCCHHHHHHHHHHhcCC
Confidence 357899999999999999999999 99999999998765322111 0000 00000010
Q ss_pred ---hhhh---------------hhccCceEEEecCCcccccCCCc----cccCHHHHHHHHHHHHHhCCcEEE-EeEEEE
Q 010693 140 ---VDCL---------------DKTWPMTCVFINDHKTKYLDRPY----GRVSRNILKTKLLENCVSNGVKFH-KAKVWH 196 (503)
Q Consensus 140 ---~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~----~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~ 196 (503)
.+.+ .....-..+...... .....+ +......+.+.|.+.+.+.|++++ +++|++
T Consensus 203 ~~~~~~v~~~~~~~~~~i~~l~~~Gv~~~~~~~~gg~--~~~r~~~~~~~~~~g~~l~~~L~~~~~~~gv~i~~~t~v~~ 280 (572)
T 1d4d_A 203 INDPELVKVLANNSSDSIDWLTSMGADMTDVGRMGGA--SVNRSHRPTGGAGVGAHVAQVLWDNAVKRGTDIRLNSRVVR 280 (572)
T ss_dssp CSCHHHHHHHHHTHHHHHHHHHHHTCCCCEEECCTTC--SSCCEEESTTTCCHHHHHHHHHHHHHHHTTCEEESSEEEEE
T ss_pred CCCHHHHHHHHHccHHHHHHHHhcCCccccccccCCC--cCCeeEecCCCCCCHHHHHHHHHHHHHHcCCeEEecCEEEE
Confidence 0000 000000001000110 000000 012356788999999999999999 999999
Q ss_pred EEEeC-CEE-EEEe--CCCc--EEEeceEEecCCCCccc
Q 010693 197 VNHQE-FES-SIVC--DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 197 i~~~~-~~~-~v~~--~~g~--~i~a~~vI~A~G~~s~v 229 (503)
+..++ +.+ .|.+ .+|+ ++.|+.||+|+|..+..
T Consensus 281 l~~~~~g~v~GV~~~~~~G~~~~i~A~~VVlAtGg~~~~ 319 (572)
T 1d4d_A 281 ILEDASGKVTGVLVKGEYTGYYVIKADAVVIAAGGFAKN 319 (572)
T ss_dssp EEEC--CCEEEEEEEETTTEEEEEECSEEEECCCCCTTC
T ss_pred EEECCCCeEEEEEEEeCCCcEEEEEcCEEEEeCCCCccC
Confidence 98766 532 2333 3664 69999999999987753
No 104
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=98.97 E-value=1.7e-09 Score=112.31 Aligned_cols=137 Identities=17% Similarity=0.264 Sum_probs=85.5
Q ss_pred CcEEEECCCHHHHHHHHHHHc--cCCCc---EEEEcCCCCCCCCCcccchhHh----hhhcCchhhhhhccCceEE----
Q 010693 86 YDVIIIGTGPAGLRLAEQVSS--RHSVK---VCCVDPSPLSTWPNNYGVWVDE----FEDIGLVDCLDKTWPMTCV---- 152 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~--~~G~~---V~viE~~~~~~~~~~~g~~~~~----l~~~~~~~~~~~~~~~~~~---- 152 (503)
+||+||||||||+++|..|++ ..|++ |+|||+.+..+ |.|... ....++. .....+.....
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~~~~~V~v~E~~~~~G-----G~w~~~~~~g~~~~g~~-~~~~~y~~l~~~~~~ 76 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGAEIPELVCFEKQADWG-----GQWNYTWRTGLDENGEP-VHSSMYRYLWSNGPK 76 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTCCCCEEEEECSSSSSC-----GGGSCCSCCSBCTTSSB-CCCCCCTTCBCSSCG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCCCCCcEEEEEcCCCCC-----CEeecCCCCCccccCCC-CcCccccchhhcCCh
Confidence 699999999999999999986 25999 99999876543 222110 0011100 00000000000
Q ss_pred ---EecCCc-cccc-CCCccccCHHHHHHHHHHHHHhCCcE--EE-EeEEEEEEEeCC--EEEEEeCC---C--cEEEec
Q 010693 153 ---FINDHK-TKYL-DRPYGRVSRNILKTKLLENCVSNGVK--FH-KAKVWHVNHQEF--ESSIVCDD---G--NEIKAS 217 (503)
Q Consensus 153 ---~~~~~~-~~~~-~~~~~~v~r~~l~~~L~~~~~~~gv~--~~-~~~v~~i~~~~~--~~~v~~~~---g--~~i~a~ 217 (503)
.+.+.. .... .....++.+..+.+.|.+.+.+.|++ ++ +++|+.++.+++ .+.|++.+ | .++.+|
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~gv~~~i~~~~~V~~v~~~~~~~~~~V~~~~~~~g~~~~~~~d 156 (464)
T 2xve_A 77 ECLEFADYTFDEHFGKPIASYPPREVLWDYIKGRVEKAGVRKYIRFNTAVRHVEFNEDSQTFTVTVQDHTTDTIYSEEFD 156 (464)
T ss_dssp GGTCBTTBCHHHHHSSCCCSSCBHHHHHHHHHHHHHHHTCGGGEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEES
T ss_pred hhcccCCCCCCcccCCCCCCCCCHHHHHHHHHHHHHHcCCcceEEeCCEEEEEEEcCCCCcEEEEEEEcCCCceEEEEcC
Confidence 000000 0000 00122367888999999988888887 87 999999998766 77777754 4 479999
Q ss_pred eEEecCCCCcc
Q 010693 218 LIVDASGFASS 228 (503)
Q Consensus 218 ~vI~A~G~~s~ 228 (503)
.||.|+|..|.
T Consensus 157 ~VVvAtG~~s~ 167 (464)
T 2xve_A 157 YVVCCTGHFST 167 (464)
T ss_dssp EEEECCCSSSS
T ss_pred EEEECCCCCCC
Confidence 99999997553
No 105
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=98.97 E-value=2.8e-09 Score=104.15 Aligned_cols=114 Identities=19% Similarity=0.202 Sum_probs=80.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEE-EcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCC-VDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~v-iE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
.++||+||||||||+++|..|++ .|++|+| +|+.. . -|.|... ..+ .. ..
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~v~li~e~~~-~-----gG~~~~~---~~~---------------~~----~~ 53 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATR-GGLKNVVMFEKGM-P-----GGQITSS---SEI---------------EN----YP 53 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHH-HTCSCEEEECSSS-T-----TGGGGGC---SCB---------------CC----ST
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCCC-C-----Cceeeee---cee---------------cc----CC
Confidence 46899999999999999999999 9999999 99832 1 1222110 000 00 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeC--CEEEEEe-CCCcEEEeceEEecCCCCccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQE--FESSIVC-DDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~--~~~~v~~-~~g~~i~a~~vI~A~G~~s~v 229 (503)
..+ ..+....+...+.+.+.+.|++++..+|+++ .++ +.+.+.+ .++ ++.+|.||.|+|.....
T Consensus 54 ~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~~v~~i-~~~~~~~~~v~~~~~~-~~~~d~lvlAtG~~~~~ 120 (315)
T 3r9u_A 54 GVA-QVMDGISFMAPWSEQCMRFGLKHEMVGVEQI-LKNSDGSFTIKLEGGK-TELAKAVIVCTGSAPKK 120 (315)
T ss_dssp TCC-SCBCHHHHHHHHHHHHTTTCCEEECCCEEEE-EECTTSCEEEEETTSC-EEEEEEEEECCCEEECC
T ss_pred CCC-CCCCHHHHHHHHHHHHHHcCcEEEEEEEEEE-ecCCCCcEEEEEecCC-EEEeCEEEEeeCCCCCC
Confidence 001 1356788888999999889999994499999 666 6777523 334 89999999999985543
No 106
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=98.95 E-value=3.3e-09 Score=113.44 Aligned_cols=144 Identities=16% Similarity=0.150 Sum_probs=86.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCC--CcEEEEcCCCCCCCCCcc---c---------chhH----hhhhc-Cc--hhh
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHS--VKVCCVDPSPLSTWPNNY---G---------VWVD----EFEDI-GL--VDC 142 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G--~~V~viE~~~~~~~~~~~---g---------~~~~----~l~~~-~~--~~~ 142 (503)
..+||+|||||+||+++|+.|++ .| .+|+|||+.+.......+ | .|.. .+... ++ .+.
T Consensus 4 ~~~DVvIVG~G~AGl~aAl~la~-~G~~~~V~vlEk~~~~~~~s~~a~GGi~~~~~~~ds~~~~~~d~~~~g~~~~d~~~ 82 (602)
T 1kf6_A 4 FQADLAIVGAGGAGLRAAIAAAQ-ANPNAKIALISKVYPMRSHTVAAEGGSAAVAQDHDSFEYHFHDTVAGGDWLCEQDV 82 (602)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HCTTCCEEEEESSCGGGSGGGGCCSCEECCCSTTCCHHHHHHHHHHHTTTCSCHHH
T ss_pred ccCCEEEECCCHHHHHHHHHHHh-cCCCCcEEEEeCCCCCCChHHHhcCccEEeCCCCCCHHHHHHHHHHhcCCCCCHHH
Confidence 35899999999999999999999 99 999999997542111000 1 1110 11110 00 000
Q ss_pred h-----------h--hccCceEEEecCC--cccccC----CCcc---c---cCHHHHHHHHHHHHHhCC-cEEE-EeEEE
Q 010693 143 L-----------D--KTWPMTCVFINDH--KTKYLD----RPYG---R---VSRNILKTKLLENCVSNG-VKFH-KAKVW 195 (503)
Q Consensus 143 ~-----------~--~~~~~~~~~~~~~--~~~~~~----~~~~---~---v~r~~l~~~L~~~~~~~g-v~~~-~~~v~ 195 (503)
+ . ..|+ +.++.. ...... .... + .....+...|.+.+.+.| ++++ +++|+
T Consensus 83 v~~~~~~~~~~i~~L~~~G---v~f~~~~~g~~~~~~~gg~~~~r~~~~~d~tg~~l~~~L~~~~~~~gnv~i~~~~~v~ 159 (602)
T 1kf6_A 83 VDYFVHHCPTEMTQLELWG---CPWSRRPDGSVNVRRFGGMKIERTWFAADKTGFHMLHTLFQTSLQFPQIQRFDEHFVL 159 (602)
T ss_dssp HHHHHHHHHHHHHHHHHTT---CCCCBCTTSSBCCBCCTTCSSCCEECSTTCHHHHHHHHHHHHHTTCTTEEEEETEEEE
T ss_pred HHHHHHHHHHHHHHHHHcC---CCcccCCCCcccccccCCccCCeEEEcCCCCHHHHHHHHHHHHHhCCCcEEEeCCEEE
Confidence 0 0 0111 111110 000000 0000 0 113578889999998888 9999 89999
Q ss_pred EEEEeCCEE---EEE-eCCCc--EEEeceEEecCCCCccccc
Q 010693 196 HVNHQEFES---SIV-CDDGN--EIKASLIVDASGFASSFVE 231 (503)
Q Consensus 196 ~i~~~~~~~---~v~-~~~g~--~i~a~~vI~A~G~~s~vr~ 231 (503)
++..+++.+ .+. +.+|+ ++.|+.||+|+|..+.++.
T Consensus 160 ~l~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~s~~~~ 201 (602)
T 1kf6_A 160 DILVDDGHVRGLVAMNMMEGTLVQIRANAVVMATGGAGRVYR 201 (602)
T ss_dssp EEEEETTEEEEEEEEETTTTEEEEEECSCEEECCCCCGGGSS
T ss_pred EEEEeCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCCccccc
Confidence 999887743 222 25676 6999999999999887754
No 107
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=98.94 E-value=3.3e-09 Score=110.26 Aligned_cols=139 Identities=19% Similarity=0.167 Sum_probs=82.2
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcc---c---------chhH----hhhhc-Cc--hh------
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNY---G---------VWVD----EFEDI-GL--VD------ 141 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~---g---------~~~~----~l~~~-~~--~~------ 141 (503)
||+|||||+||+++|+.|++ .|.+|+|||+....+. ..+ | .+.. .+... ++ .+
T Consensus 1 DVvVIG~G~AGl~aA~~la~-~G~~V~viek~~~~g~-s~~a~Ggi~~~~~~~d~~~~~~~d~l~~g~~~~d~~~v~~~~ 78 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRR-AGKKVTLISKRIDGGS-TPIAKGGVAASVGSDDSPELHAQDTIRVGDGLCDVKTVNYVT 78 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEECSSTTCSS-GGGCCSCEECCCSTTCCHHHHHHHHHHHHTTCSCHHHHHHHH
T ss_pred CEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCCch-HHHHhCCeEEeCCCCCCHHHHHHHHHHhcCCcCCHHHHHHHH
Confidence 89999999999999999999 9999999999722211 110 0 0100 00000 00 00
Q ss_pred -----hhhh--ccCceEEEecCC----cccccCCCc--cccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-E
Q 010693 142 -----CLDK--TWPMTCVFINDH----KTKYLDRPY--GRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-I 206 (503)
Q Consensus 142 -----~~~~--~~~~~~~~~~~~----~~~~~~~~~--~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v 206 (503)
.+.. .+. +.++.. ......... +......+.+.|.+.+++.|++++ +++| ++..+++.+. +
T Consensus 79 ~~~~~~i~~l~~~G---v~~~~~~~~~~g~~~~r~~~~~d~~g~~l~~~L~~~~~~~gv~i~~~~~v-~l~~~~~~v~Gv 154 (472)
T 2e5v_A 79 SEAKNVIETFESWG---FEFEEDLRLEGGHTKRRVLHRTDETGREIFNFLLKLAREEGIPIIEDRLV-EIRVKDGKVTGF 154 (472)
T ss_dssp HHHHHHHHHHHHTT---CCCCSSCBCCTTCSSCCEECSSSCHHHHHHHHHHHHHHHTTCCEECCCEE-EEEEETTEEEEE
T ss_pred HHHHHHHHHHHHcC---CCCCcccccccCcCcCcEEEeCCCCHHHHHHHHHHHHHhCCCEEEECcEE-EEEEeCCEEEEE
Confidence 0000 011 111110 000000000 112346788888888878999999 8999 9988777552 3
Q ss_pred EeC-CCcEEEeceEEecCCCCccccc
Q 010693 207 VCD-DGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 207 ~~~-~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
.+. ++.++.||.||.|+|..+.+..
T Consensus 155 ~v~~~~g~~~a~~VVlAtGg~~~~~~ 180 (472)
T 2e5v_A 155 VTEKRGLVEDVDKLVLATGGYSYLYE 180 (472)
T ss_dssp EETTTEEECCCSEEEECCCCCGGGSS
T ss_pred EEEeCCCeEEeeeEEECCCCCcccCc
Confidence 332 2335889999999999987754
No 108
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=98.90 E-value=9.7e-09 Score=109.59 Aligned_cols=58 Identities=17% Similarity=0.145 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHhCCcEEE-EeEEEEEEEe-CCEE-EEEe---CCCc--EEEeceEEecCCCCccc
Q 010693 172 NILKTKLLENCVSNGVKFH-KAKVWHVNHQ-EFES-SIVC---DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 172 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~-~v~~---~~g~--~i~a~~vI~A~G~~s~v 229 (503)
..+...|.+.+.+.|++++ +++|+++..+ ++.+ .|.+ .+|+ ++.|+.||+|+|..+..
T Consensus 143 ~~l~~~L~~~~~~~gv~i~~~~~v~~L~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGg~~~~ 208 (588)
T 2wdq_A 143 HALLHTLYQQNLKNHTTIFSEWYALDLVKNQDGAVVGCTALCIETGEVVYFKARATVLATGGAGRI 208 (588)
T ss_dssp HHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEeCcEEEEEEECCCCEEEEEEEEEcCCCeEEEEEcCEEEECCCCCccc
Confidence 6788889999989999999 9999999986 4533 2332 4565 69999999999987754
No 109
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=98.89 E-value=4.4e-09 Score=111.14 Aligned_cols=58 Identities=14% Similarity=0.137 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHh-CCcEEE-EeEEEEEEE-eCC------EE-EEEeC---CCc--EEEeceEEecCCCCccc
Q 010693 172 NILKTKLLENCVS-NGVKFH-KAKVWHVNH-QEF------ES-SIVCD---DGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 172 ~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~-~~~------~~-~v~~~---~g~--~i~a~~vI~A~G~~s~v 229 (503)
..+.+.|.+.+.+ .|++++ ++.|+++.. +++ .+ .|.+. +|+ ++.|+.||+|+|..+.+
T Consensus 138 ~~l~~~L~~~~~~~~gv~i~~~~~v~~L~~~~~g~~~~~~~v~Gv~~~~~~~G~~~~i~A~~VVlAtGg~~~~ 210 (540)
T 1chu_A 138 REVETTLVSKALNHPNIRVLERTNAVDLIVSDKIGLPGTRRVVGAWVWNRNKETVETCHAKAVVLATGGASKV 210 (540)
T ss_dssp ----CCCHHHHHHCTTEEEECSEEEEEEEEGGGTTCCSSCBEEEEEEEETTTTEEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHcCCCCEEEeCcEEEEEEEcCCCCcccCCEEEEEEEEEcCCCcEEEEEcCeEEECCCCcccc
Confidence 4677778888888 799999 999999987 434 33 24432 565 69999999999998865
No 110
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=98.89 E-value=4.8e-09 Score=108.95 Aligned_cols=131 Identities=20% Similarity=0.188 Sum_probs=77.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhH-h-hhhcCchhhhhhccCceEEEecCCcccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVD-E-FEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~-~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
+|||+||||||||+++|..|++ .|++|+|||+.+..+.. .+.|+... . +......+.+... .. . .
T Consensus 4 ~~DVvVIGgG~aGl~aA~~l~~-~G~~V~liEk~~~~GG~~~~~gciPsk~l~~~a~~~~~~~~~-~~-------~---~ 71 (466)
T 3l8k_A 4 KYDVVVIGAGGAGYHGAFRLAK-AKYNVLMADPKGELGGNCLYSGCVPSKTVREVIQTAWRLTNI-AN-------V---K 71 (466)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-TTCCEEEECTTSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHH-HC-------S---C
T ss_pred cceEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCCCCcccccCCCchHHHHHHHHHHHHHHhc-cc-------C---C
Confidence 5999999999999999999999 99999999976543210 01111110 0 0000000001100 00 0 0
Q ss_pred cCCCccc-cC-HHH---HH--HHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcE--EEeceEEecCCCCccc
Q 010693 162 LDRPYGR-VS-RNI---LK--TKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNE--IKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~-v~-r~~---l~--~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~--i~a~~vI~A~G~~s~v 229 (503)
....+.. .. ... +. ..+.+.+.+.|++++..++..++ .+.+.|.+.+|++ +.+|.||.|+|.....
T Consensus 72 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~v~~id--~~~~~V~~~~g~~~~~~~d~lviAtG~~p~~ 146 (466)
T 3l8k_A 72 IPLDFSTVQDRKDYVQELRFKQHKRNMSQYETLTFYKGYVKIKD--PTHVIVKTDEGKEIEAETRYMIIASGAETAK 146 (466)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHTTCTTEEEESEEEEEEE--TTEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred CCcCHHHHHHHHHhheeccccchHHHHHHhCCCEEEEeEEEEec--CCeEEEEcCCCcEEEEecCEEEECCCCCccC
Confidence 0001111 11 111 22 44445555689999944777665 5578888888888 9999999999975543
No 111
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.89 E-value=2.7e-09 Score=110.94 Aligned_cols=140 Identities=18% Similarity=0.180 Sum_probs=79.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhH--hhhhcCchhhhhhccCceEEEecCCcc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVD--EFEDIGLVDCLDKTWPMTCVFINDHKT 159 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (503)
+.++||+||||||||+++|..|++ .|++|+|||+.+..+.. .+.|+... .+....+.+.+........+.....
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~-~g~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~~~~~~g~~~~~~-- 80 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQ-LGFKTTCIEKRGALGGTCLNVGCIPSKALLHSSHMYHEAKHSFANHGVKVSNV-- 80 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSSSCCSHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEEESCE--
T ss_pred CccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCCccccccCcCccchHHHHHHHHHHHHHHHHHHhcCcccCCC--
Confidence 356999999999999999999999 99999999987543221 11121110 0011011000100000000111100
Q ss_pred cccCCCccc-cC-----HHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCCcccc
Q 010693 160 KYLDRPYGR-VS-----RNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFASSFV 230 (503)
Q Consensus 160 ~~~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~s~vr 230 (503)
.. .+.. +. ...+.+.+.+.+.+.|++++ ++.+. + +.+.+.|.+.+| .++++|.||+|+|..+.+.
T Consensus 81 -~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~-~--~~~~~~v~~~~G~~~~i~~d~lIiAtGs~p~~p 154 (470)
T 1dxl_A 81 -EI--DLAAMMGQKDKAVSNLTRGIEGLFKKNKVTYVKGYGKF-V--SPSEISVDTIEGENTVVKGKHIIIATGSDVKSL 154 (470)
T ss_dssp -EE--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE-E--ETTEEEECCSSSCCEEEECSEEEECCCEEECCB
T ss_pred -cc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE-e--cCCEEEEEeCCCceEEEEcCEEEECCCCCCCCC
Confidence 00 1111 11 12244445556666799998 55443 3 456778877777 6899999999999877654
Q ss_pred c
Q 010693 231 E 231 (503)
Q Consensus 231 ~ 231 (503)
.
T Consensus 155 ~ 155 (470)
T 1dxl_A 155 P 155 (470)
T ss_dssp T
T ss_pred C
Confidence 3
No 112
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=98.89 E-value=1.2e-08 Score=109.30 Aligned_cols=59 Identities=15% Similarity=0.160 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEe---CCCc--EEEeceEEecCCCCccc
Q 010693 171 RNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVC---DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 171 r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~---~~g~--~i~a~~vI~A~G~~s~v 229 (503)
...+...|.+.+.+.|++++ ++.|+++..+++.+. |.+ .+|+ .+.|+.||+|+|..+.+
T Consensus 154 G~~l~~~L~~~~~~~gv~i~~~~~v~~Li~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 219 (621)
T 2h88_A 154 GHSLLHTLYGRSLRYDTSYFVEYFALDLLMENGECRGVIALCIEDGTIHRFRAKNTVIATGGYGRT 219 (621)
T ss_dssp HHHHHHHHHHHHTTSCCEEEETEEEEEEEEETTEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHHhCCCEEEEceEEEEEEEECCEEEEEEEEEcCCCcEEEEEcCeEEECCCccccc
Confidence 35788899999988999999 899999988776432 332 4565 69999999999988754
No 113
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=98.86 E-value=6.8e-09 Score=109.32 Aligned_cols=140 Identities=18% Similarity=0.210 Sum_probs=76.8
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCC--cccc-hhH-----h--h-hhcCchhhhhhccCce
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPN--NYGV-WVD-----E--F-EDIGLVDCLDKTWPMT 150 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~--~~g~-~~~-----~--l-~~~~~~~~~~~~~~~~ 150 (503)
.+.+|||+||||||||+++|..|++ .|++|+|||+.+...+.. ..|. |.. . + ........+... ...
T Consensus 29 ~~~~~DVvVIGgGpaGl~aA~~la~-~G~~V~liEk~~~~~~~~~~~~GGtc~~~GciPsk~l~~~~~~~~~~~~~-~~~ 106 (519)
T 3qfa_A 29 KSYDYDLIIIGGGSGGLAAAKEAAQ-YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIPKKLMHQAALLGQALQDS-RNY 106 (519)
T ss_dssp SSCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCCCCTTCCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHH-HHT
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeccCccccccCCCcccccCCcCccchHHHHHHHHHHHHHHHH-Hhc
Confidence 3457999999999999999999999 999999999865332221 1221 111 0 0 000000000000 000
Q ss_pred EEEecCCcccccCCCccc-cC-H----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCc--EEEeceEEec
Q 010693 151 CVFINDHKTKYLDRPYGR-VS-R----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGN--EIKASLIVDA 222 (503)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~-v~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~--~i~a~~vI~A 222 (503)
.+.+... ....+.. +. + ..+...+.......|++++..++..+. ...+.|...+|+ ++.+|.||.|
T Consensus 107 g~~~~~~----~~~d~~~~~~~~~~~~~~l~~~~~~~~~~~gV~~i~g~a~~~d--~~~v~v~~~~g~~~~i~~d~lViA 180 (519)
T 3qfa_A 107 GWKVEET----VKHDWDRMIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIG--PHRIKATNNKGKEKIYSAERFLIA 180 (519)
T ss_dssp TBCCCSS----CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEEE--TTEEEEECTTCCCCEEEEEEEEEC
T ss_pred CcccCCc----CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CCEEEEEcCCCCEEEEECCEEEEE
Confidence 0000000 0001111 11 1 122233334455689999855555443 556778777775 7999999999
Q ss_pred CCCCccc
Q 010693 223 SGFASSF 229 (503)
Q Consensus 223 ~G~~s~v 229 (503)
+|.....
T Consensus 181 TGs~p~~ 187 (519)
T 3qfa_A 181 TGERPRY 187 (519)
T ss_dssp CCEEECC
T ss_pred CCCCcCC
Confidence 9975543
No 114
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.85 E-value=2.2e-09 Score=112.04 Aligned_cols=136 Identities=15% Similarity=0.143 Sum_probs=76.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC-CCcccchhH--hhhhcCchhhhhhccCceEEEecCCccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW-PNNYGVWVD--EFEDIGLVDCLDKTWPMTCVFINDHKTK 160 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~-~~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (503)
.+|||+|||||+||+++|..|++ .|++|+|||+.+..+. ..+.|+... .+....+.+.+... ....+.+...
T Consensus 5 ~~~dVvIIGaG~aGl~aA~~l~~-~G~~V~liE~~~~~GG~~~~~g~~psk~ll~~~~~~~~~~~~-~~~gi~~~~~--- 79 (482)
T 1ojt_A 5 AEYDVVVLGGGPGGYSAAFAAAD-EGLKVAIVERYKTLGGVCLNVGCIPSKALLHNAAVIDEVRHL-AANGIKYPEP--- 79 (482)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSCSSHHHHHHSHHHHHHHHHHHHHHHHHHHG-GGGTCCCCCC---
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCCCCceeeecccchHHHHHHHHHHHHHHHH-HhCCcccCCC---
Confidence 36999999999999999999999 9999999998654321 001111110 01111111111100 0000000000
Q ss_pred ccCCCccc-cCH-----HHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC------------cEEEeceEEe
Q 010693 161 YLDRPYGR-VSR-----NILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG------------NEIKASLIVD 221 (503)
Q Consensus 161 ~~~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g------------~~i~a~~vI~ 221 (503)
...+.. +.+ ..+.+.+.+.+.+.|++++ ++.+. .+++.+.|.+.+| .++++|.||.
T Consensus 80 --~~~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~v~~~~g~~~~~~~~~g~~~~i~ad~lVi 154 (482)
T 1ojt_A 80 --ELDIDMLRAYKDGVVSRLTGGLAGMAKSRKVDVIQGDGQF---LDPHHLEVSLTAGDAYEQAAPTGEKKIVAFKNCII 154 (482)
T ss_dssp --CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEE---EETTEEEEEEEEEEETTEEEEEEEEEEEEEEEEEE
T ss_pred --ccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEeeEEEE---ccCCEEEEEecCCcccccccccCcceEEEcCEEEE
Confidence 001111 111 2233345556667899998 55443 3456777766555 5799999999
Q ss_pred cCCCCccc
Q 010693 222 ASGFASSF 229 (503)
Q Consensus 222 A~G~~s~v 229 (503)
|+|..+..
T Consensus 155 AtGs~p~~ 162 (482)
T 1ojt_A 155 AAGSRVTK 162 (482)
T ss_dssp CCCEEECC
T ss_pred CCCCCCCC
Confidence 99988754
No 115
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.84 E-value=2.4e-09 Score=111.60 Aligned_cols=136 Identities=18% Similarity=0.184 Sum_probs=76.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhH--hhhhcCchhhhhhccCceEEEecCCccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVD--EFEDIGLVDCLDKTWPMTCVFINDHKTK 160 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (503)
.++||+||||||||+++|+.|++ .|++|+|||+.+..+.. .+.|+... .+......+.+........+......
T Consensus 4 ~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~gi~~~~~~-- 80 (478)
T 1v59_A 4 KSHDVVIIGGGPAGYVAAIKAAQ-LGFNTACVEKRGKLGGTCLNVGCIPSKALLNNSHLFHQMHTEAQKRGIDVNGDI-- 80 (478)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTSGGGTEEECSCE--
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCCcCCccceeccHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC--
Confidence 35899999999999999999999 99999999986433210 00111000 01111111111100011111110000
Q ss_pred ccCCCcccc-C-----HHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC--cE------EEeceEEecCCC
Q 010693 161 YLDRPYGRV-S-----RNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG--NE------IKASLIVDASGF 225 (503)
Q Consensus 161 ~~~~~~~~v-~-----r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~------i~a~~vI~A~G~ 225 (503)
.. .+..+ . ...+...+.+.+.+.|++++ ++.+. .+++.+.|.+.+| ++ +++|.||.|+|.
T Consensus 81 ~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~---~~~~~v~V~~~~G~~~~~~~~~~i~~d~lViAtGs 155 (478)
T 1v59_A 81 KI--NVANFQKAKDDAVKQLTGGIELLFKKNKVTYYKGNGSF---EDETKIRVTPVDGLEGTVKEDHILDVKNIIVATGS 155 (478)
T ss_dssp EE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE---SSSSEEEEECCTTCTTCCSSCEEEEEEEEEECCCE
T ss_pred cc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE---ccCCeEEEEecCCCcccccccceEEeCEEEECcCC
Confidence 00 00000 0 12334445566677899998 65553 2556788887777 56 999999999997
Q ss_pred Cc
Q 010693 226 AS 227 (503)
Q Consensus 226 ~s 227 (503)
.+
T Consensus 156 ~p 157 (478)
T 1v59_A 156 EV 157 (478)
T ss_dssp EE
T ss_pred CC
Confidence 66
No 116
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=98.82 E-value=8e-09 Score=108.38 Aligned_cols=53 Identities=19% Similarity=0.204 Sum_probs=42.4
Q ss_pred HHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCC
Q 010693 172 NILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFA 226 (503)
Q Consensus 172 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~ 226 (503)
..+.+.|.+.+.+.|++++ +++|+++..+++. +++.+|+++.||.||.+.-..
T Consensus 222 ~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~--v~~~~G~~~~ad~vI~t~P~~ 275 (513)
T 4gde_A 222 GGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT--VTLQDGTTIGYKKLVSTMAVD 275 (513)
T ss_dssp HHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE--EEETTSCEEEEEEEEECSCHH
T ss_pred HHHHHHHHHHHHhcCeeeecceEEEEEEccCCE--EEEcCCCEEECCEEEECCCHH
Confidence 3456667777777899999 9999999987765 567899999999999887543
No 117
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.81 E-value=1.3e-08 Score=104.58 Aligned_cols=112 Identities=15% Similarity=0.215 Sum_probs=73.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
.+||+|||||+||+++|..|++ .|+ +|+|||+.+...+.+. .+.. ..+... .....
T Consensus 4 ~~~vvIIGgG~aGl~aA~~l~~-~g~~~~V~lie~~~~~~~~~~------~l~~----~~~~~~----------~~~~~- 61 (431)
T 1q1r_A 4 NDNVVIVGTGLAGVEVAFGLRA-SGWEGNIRLVGDATVIPHHLP------PLSK----AYLAGK----------ATAES- 61 (431)
T ss_dssp SCEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSCCSCCBCSG------GGGT----TTTTTC----------SCSGG-
T ss_pred CCcEEEEcCHHHHHHHHHHHHc-cCcCCCEEEEECCCCCCCcCC------CCcH----HHhCCC----------CChHH-
Confidence 5899999999999999999999 998 7999998754321110 0000 000000 00000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
. ... +.+.+.+.|++++ +++|+.++.++. .|.+.+|+++.+|.||.|+|..+....
T Consensus 62 ---~-~~~-------~~~~~~~~gv~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~p~~~~ 118 (431)
T 1q1r_A 62 ---L-YLR-------TPDAYAAQNIQLLGGTQVTAINRDRQ--QVILSDGRALDYDRLVLATGGRPRPLP 118 (431)
T ss_dssp ---G-BSS-------CHHHHHHTTEEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECCCG
T ss_pred ---h-ccc-------CHHHHHhCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEcCCCCccCCC
Confidence 0 000 1122346799999 889999987654 466678889999999999998765443
No 118
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.81 E-value=4.7e-09 Score=108.68 Aligned_cols=136 Identities=14% Similarity=0.103 Sum_probs=76.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhH-h-hhhcCchhhhhhccCceEEEecCCccccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVD-E-FEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~-~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
+|||+||||||||+++|..|++ .|++|+|||+....+...++|+... . +......+.+.. .....+.+... ..
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~~gG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~~g~~~~~~---~~ 77 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQ-LGQKVTIVEKGNLGGVCLNVGCIPSKALISASHRYEQAKH-SEEMGIKAENV---TI 77 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHHT-CGGGTEECCSC---EE
T ss_pred cCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCCCcCcCcCchhhHHHHHHHHHHHHHHH-HHhcCcccCCC---cc
Confidence 5899999999999999999999 9999999998621100001111110 0 000000001100 00011111110 00
Q ss_pred CCCccc-cCH-----HHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC-cEEEeceEEecCCCCcccc
Q 010693 163 DRPYGR-VSR-----NILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG-NEIKASLIVDASGFASSFV 230 (503)
Q Consensus 163 ~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g-~~i~a~~vI~A~G~~s~vr 230 (503)
.+.. +.+ ..+.+.+.+.+.+.|++++ ++.+ .+ +.+.+.|.+.+| .++++|.||.|+|..+...
T Consensus 78 --~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~-~i--d~~~v~V~~~~G~~~i~~d~lViATGs~p~~~ 148 (455)
T 1ebd_A 78 --DFAKVQEWKASVVKKLTGGVEGLLKGNKVEIVKGEAY-FV--DANTVRVVNGDSAQTYTFKNAIIATGSRPIEL 148 (455)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHTTTCEEEESEEE-EE--ETTEEEEEETTEEEEEECSEEEECCCEEECCB
T ss_pred --CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEE-Ec--cCCeEEEEeCCCcEEEEeCEEEEecCCCCCCC
Confidence 1111 111 1244455666777899998 5433 33 456788888877 6899999999999876543
No 119
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.81 E-value=5.6e-09 Score=108.70 Aligned_cols=139 Identities=17% Similarity=0.178 Sum_probs=76.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhH--hhhhcCchhhhh-hccCceEEEecCCcc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVD--EFEDIGLVDCLD-KTWPMTCVFINDHKT 159 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~--~l~~~~~~~~~~-~~~~~~~~~~~~~~~ 159 (503)
.++||+||||||||+++|..|++ .|++|+|||+.+..+.. .++|+... .+........+. .......+....
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~~~GG~~~~~g~~Psk~l~~~~~~~~~~~~~~~~~~g~~~~~--- 80 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQ-LGFKTVCIEKNETLGGTCLNVGCIPSKALLNNSHYYHMAHGTDFASRGIEMSE--- 80 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHSSHHHHTTEEESC---
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCcCCcccccCccchHHHHHHHHHHHHhhhhhHhhCccccCC---
Confidence 46999999999999999999999 99999999987543210 01111100 011000000000 000000010000
Q ss_pred cccCCCccc-cC-H----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCC-C-cEEEeceEEecCCCCcccc
Q 010693 160 KYLDRPYGR-VS-R----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDD-G-NEIKASLIVDASGFASSFV 230 (503)
Q Consensus 160 ~~~~~~~~~-v~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~-g-~~i~a~~vI~A~G~~s~vr 230 (503)
... .+.. +. + ..+...+.+.+.+.|++++..++..+ +.+.+.|.+.+ | +++++|.||.|+|..+...
T Consensus 81 ~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~gv~~~~g~~~~~--~~~~~~v~~~~gg~~~~~~d~lViAtGs~p~~p 155 (474)
T 1zmd_A 81 VRL--NLDKMMEQKSTAVKALTGGIAHLFKQNKVVHVNGYGKIT--GKNQVTATKADGGTQVIDTKNILIATGSEVTPF 155 (474)
T ss_dssp EEE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEEE--ETTEEEEECTTSCEEEEEEEEEEECCCEEECCC
T ss_pred Ccc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--cCCEEEEEecCCCcEEEEeCEEEECCCCCCCCC
Confidence 000 1111 11 1 12333345566678999984344433 45678888877 4 4799999999999876543
No 120
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=98.79 E-value=2.8e-08 Score=107.10 Aligned_cols=58 Identities=17% Similarity=0.205 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEe---CCCc--EEEeceEEecCCCCccc
Q 010693 172 NILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVC---DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 172 ~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~---~~g~--~i~a~~vI~A~G~~s~v 229 (503)
..+...|.+.+.+.|++++ ++.|+++..+++.+. |.+ .+|+ .+.|+.||.|+|..+.+
T Consensus 158 ~~l~~~L~~~a~~~gv~i~~~~~v~~L~~~~g~v~Gv~~~~~~~G~~~~i~A~~VVlATGG~~~~ 222 (660)
T 2bs2_A 158 HTMLFAVANECLKLGVSIQDRKEAIALIHQDGKCYGAVVRDLVTGDIIAYVAKGTLIATGGYGRI 222 (660)
T ss_dssp HHHHHHHHHHHHHHTCEEECSEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECCCCCGGG
T ss_pred HHHHHHHHHHHHhCCCEEEECcEEEEEEecCCEEEEEEEEECCCCcEEEEEcCEEEEccCcchhh
Confidence 4688889999888899999 999999988766432 222 4565 59999999999988754
No 121
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.79 E-value=8.1e-09 Score=108.01 Aligned_cols=137 Identities=17% Similarity=0.154 Sum_probs=74.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhHh--hhhcCchhhhhhccCceEEEecCCc
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVDE--FEDIGLVDCLDKTWPMTCVFINDHK 158 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~ 158 (503)
.+.+|||+||||||||+++|..|++ .|++|+|||+.+..+.. .+.|++... +.................+.....
T Consensus 22 ~m~~~dVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~~~GG~~~~~gciP~k~l~~~~~~~~~~~~~~~~~g~~~~~~- 99 (491)
T 3urh_A 22 SMMAYDLIVIGSGPGGYVCAIKAAQ-LGMKVAVVEKRSTYGGTCLNVGCIPSKALLHASEMFHQAQHGLEALGVEVANP- 99 (491)
T ss_dssp ----CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHSSGGGTEECCCC-
T ss_pred hcccCCEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCCCCCccccccchhhHHHHHHHHHHHHHHhhHhhcCcccCCC-
Confidence 4457999999999999999999999 99999999986543210 111221110 011011011111011111111110
Q ss_pred ccccCCCccc-cC-----HHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCC
Q 010693 159 TKYLDRPYGR-VS-----RNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFA 226 (503)
Q Consensus 159 ~~~~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~ 226 (503)
.. .+.. +. ...+...+.......|++++...+.. .+.+.+.|...+| .++.+|.||.|+|..
T Consensus 100 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~--~~~~~~~v~~~~g~~~~~~~d~lViATGs~ 169 (491)
T 3urh_A 100 --KL--NLQKMMAHKDATVKSNVDGVSFLFKKNKIDGFQGTGKV--LGQGKVSVTNEKGEEQVLEAKNVVIATGSD 169 (491)
T ss_dssp --EE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEE--CSSSEEEEECTTSCEEEEECSEEEECCCEE
T ss_pred --cc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEE--ecCCEEEEEeCCCceEEEEeCEEEEccCCC
Confidence 00 1111 11 12233344455567899998444433 3355778887777 479999999999965
No 122
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=98.78 E-value=3.6e-08 Score=101.93 Aligned_cols=55 Identities=11% Similarity=0.067 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHhCCcEEE-EeEEEEEEEe--CCEE-EEEeCCCcEEEeceEEecCCCCcc
Q 010693 173 ILKTKLLENCVSNGVKFH-KAKVWHVNHQ--EFES-SIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 173 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~--~~~~-~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.+.+.|.+.+++.|++++ +++|+++..+ ++++ .|.+ +|+++.||.||.|.|..+.
T Consensus 243 ~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~~~~~V~~-~g~~~~ad~VV~a~~~~~~ 301 (453)
T 2bcg_G 243 ELPQGFARLSAIYGGTYMLDTPIDEVLYKKDTGKFEGVKT-KLGTFKAPLVIADPTYFPE 301 (453)
T ss_dssp HHHHHHHHHHHHTTCEEECSCCCCEEEEETTTTEEEEEEE-TTEEEECSCEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEECCCCeEEEEEE-CCeEEECCEEEECCCccch
Confidence 466677788888999999 9999999988 6665 4454 5788999999999998753
No 123
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.78 E-value=9.2e-09 Score=107.10 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=77.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCccc-chhHh-------h-hhcCchhhhhhccCceEEEe
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYG-VWVDE-------F-EDIGLVDCLDKTWPMTCVFI 154 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g-~~~~~-------l-~~~~~~~~~~~~~~~~~~~~ 154 (503)
.+|||+||||||+|+++|+.|++ .|++|+|||+++..+....+| .|... + .................+..
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~~~gG~~~~GG~~~~~gciPsk~l~~~~~~~~~~~~~~~~~g~~~ 80 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQ-LGLKTALIEKYKGKEGKTALGGTCLNVGCIPSKALLDSSYKFHEAHESFKLHGIST 80 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-HTCCEEEEECCBCTTSSBCCSHHHHHHSHHHHHHHHHHHHHHHHHHTTSGGGTEEC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCEEEEEeCCCccCCCCCcCCccccccHHHHHHHHHHHHHHHHHHHHHHhcCccc
Confidence 46999999999999999999999 999999999986443222232 22110 0 00000000000001111111
Q ss_pred cCCcccccCCCccc-cC-H----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCC
Q 010693 155 NDHKTKYLDRPYGR-VS-R----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFA 226 (503)
Q Consensus 155 ~~~~~~~~~~~~~~-v~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~ 226 (503)
... .. .+.. .. . ..+...+.......|++++..++.. .+.+.+.|...+| .++.+|.||.|+|..
T Consensus 81 ~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~--~~~~~~~v~~~~g~~~~~~~d~lvlAtG~~ 153 (476)
T 3lad_A 81 GEV---AI--DVPTMIARKDQIVRNLTGGVASLIKANGVTLFEGHGKL--LAGKKVEVTAADGSSQVLDTENVILASGSK 153 (476)
T ss_dssp SCC---EE--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESEEEE--CSTTCEEEECTTSCEEEECCSCEEECCCEE
T ss_pred CCC---cc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE--ecCCEEEEEcCCCceEEEEcCEEEEcCCCC
Confidence 110 00 1110 11 1 2233334445556789998444444 3456778887777 479999999999975
Q ss_pred cc
Q 010693 227 SS 228 (503)
Q Consensus 227 s~ 228 (503)
..
T Consensus 154 p~ 155 (476)
T 3lad_A 154 PV 155 (476)
T ss_dssp EC
T ss_pred CC
Confidence 43
No 124
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.76 E-value=5.9e-09 Score=108.85 Aligned_cols=129 Identities=19% Similarity=0.270 Sum_probs=72.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHh--hhhcCc----hhhhhhccCceEEEecCCc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDE--FEDIGL----VDCLDKTWPMTCVFINDHK 158 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~--l~~~~~----~~~~~~~~~~~~~~~~~~~ 158 (503)
+|||+||||||+|+++|+.|++ .|++|+|||++...+...+.|+.... +..... .......+.. ...
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~-~G~~V~liEk~~~GG~~~~~gcip~k~l~~~a~~~~~~~~~~~~g~~~-----~~~- 98 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGA-LGKRVAIAEEYRIGGTCVIRGCVPKKLYFYASQYAQEFSKSIGFGWKY-----ADP- 98 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHHHGGGTBCC-----CCC-
T ss_pred CCCEEEECcCHHHHHHHHHHHh-CcCEEEEEeCCCCCCceeccCccccHHHHHHHHHHHHHHHHHhCCccc-----CCC-
Confidence 6999999999999999999999 99999999984221111111211110 000000 0000111110 000
Q ss_pred ccccCCCccc-cC-----HHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeC-CCcEEEeceEEecCCCCcc
Q 010693 159 TKYLDRPYGR-VS-----RNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCD-DGNEIKASLIVDASGFASS 228 (503)
Q Consensus 159 ~~~~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~-~g~~i~a~~vI~A~G~~s~ 228 (503)
.. .+.. +. ...+...+.+.+.+.|++++..++..++ ... +.+. ++.++.+|.+|.|+|....
T Consensus 99 --~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~--~~~--v~v~~~~~~~~~d~lviAtG~~p~ 167 (484)
T 3o0h_A 99 --IF--NWEKLVAAKNKEISRLEGLYREGLQNSNVHIYESRAVFVD--EHT--LELSVTGERISAEKILIATGAKIV 167 (484)
T ss_dssp --EE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE--TTE--EEETTTCCEEEEEEEEECCCEEEC
T ss_pred --cc--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEee--CCE--EEEecCCeEEEeCEEEEccCCCcc
Confidence 00 0100 00 1234445566667789999855665554 333 4444 6778999999999997654
No 125
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.76 E-value=8.8e-09 Score=106.55 Aligned_cols=113 Identities=15% Similarity=0.119 Sum_probs=71.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
+||+|||||+||+++|..|++ . |.+|+|||+.+...+ ..|+. .. .+...... . +. ..+.
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~-~~~g~~V~lie~~~~~~~-~~~~~--~~--------~~~g~~~~----~-~~--~~~~ 61 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIA-DHPDADVTAYEMNDNISF-LSCGI--AL--------YLGKEIKN----N-DP--RGLF 61 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HCTTCEEEEEESSSCCCB-CGGGH--HH--------HHTTCBGG----G-CG--GGGB
T ss_pred CeEEEECCCHHHHHHHHHHHh-hCcCCcEEEEECCCCCCc-ccccc--hh--------hhcCCccc----C-CH--HHhh
Confidence 589999999999999999999 7 999999998764321 11111 10 00000000 0 00 0000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC-C--CcEEEeceEEecCCCCccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD-D--GNEIKASLIVDASGFASSF 229 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~--g~~i~a~~vI~A~G~~s~v 229 (503)
..+.+.+.+.|++++ +++|..++.+++.+.+... + +.++++|.+|.|+|..+..
T Consensus 62 ------------~~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtGs~p~~ 119 (452)
T 2cdu_A 62 ------------YSSPEELSNLGANVQMRHQVTNVDPETKTIKVKDLITNEEKTEAYDKLIMTTGSKPTV 119 (452)
T ss_dssp ------------SCCHHHHHHTTCEEEESEEEEEEEGGGTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred ------------hcCHHHHHHcCCEEEeCCEEEEEEcCCCEEEEEecCCCceEEEECCEEEEccCCCcCC
Confidence 011222345799997 8899999877777776542 2 3579999999999976544
No 126
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=98.75 E-value=2.5e-08 Score=107.61 Aligned_cols=143 Identities=17% Similarity=0.247 Sum_probs=81.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHH----ccCCCcEEEEcCCCCCCCCCcc--cch-----h------------Hh-----hh
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVS----SRHSVKVCCVDPSPLSTWPNNY--GVW-----V------------DE-----FE 135 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La----~~~G~~V~viE~~~~~~~~~~~--g~~-----~------------~~-----l~ 135 (503)
..+||||||||+|||++|+.|+ + .|.+|+|||+.+.... ..+ |.+ . +. +.
T Consensus 21 ~~~DVvVIG~G~AGl~AAl~aa~~~~~-~G~~V~vlEK~~~~~s-~~~a~G~~~~~~~~~~~~~~g~~ds~~~~~~~~~~ 98 (643)
T 1jnr_A 21 VETDILIIGGGFSGCGAAYEAAYWAKL-GGLKVTLVEKAAVERS-GAVAQGLSAINTYIDLTGRSERQNTLEDYVRYVTL 98 (643)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHHTT-TTCCEEEECSSCTTTC-STTTTCEEEESCCCCSSSSBSCCCCHHHHHHHHHH
T ss_pred ccCCEEEECcCHHHHHHHHHHhhhhhh-CCCeEEEEeCcCCCCC-cceecccccccchhhHHHhcCCCCCHHHHHHHHHH
Confidence 4699999999999999999999 5 6999999999864221 111 110 0 00 00
Q ss_pred h-cCc--hhhhh----h---------ccCceEEEecCCcccccCCC-ccccCHHHHHHHHHHHHHhC-Cc-EEE-EeEEE
Q 010693 136 D-IGL--VDCLD----K---------TWPMTCVFINDHKTKYLDRP-YGRVSRNILKTKLLENCVSN-GV-KFH-KAKVW 195 (503)
Q Consensus 136 ~-~~~--~~~~~----~---------~~~~~~~~~~~~~~~~~~~~-~~~v~r~~l~~~L~~~~~~~-gv-~~~-~~~v~ 195 (503)
. .++ .+.+. . .++ ..+............. ...++...+.+.|.+.+.+. |+ +++ ++.|+
T Consensus 99 ~g~~l~d~~~v~~~~~~~~~~i~~l~~~G-v~f~~~~~g~~~~~~~~~~~~~g~~~~~~l~~~~~~~~gv~~i~~~~~v~ 177 (643)
T 1jnr_A 99 DMMGLAREDLVADYARHVDGTVHLFEKWG-LPIWKTPDGKYVREGQWQIMIHGESYKPIIAEAAKMAVGEENIYERVFIF 177 (643)
T ss_dssp HTTTCCCHHHHHHHHHHHHHHHHHHHHTT-CCBCBCTTSCBCBSSSSCEEEEETTHHHHHHHHHHHHHCGGGEECSEEEE
T ss_pred HhcCcCcHHHHHHHHHHHHHHHHHHHHcC-CcceeCCCCCccCCCccccCCCcHHHHHHHHHHHHhcCCCcEEEecCEEE
Confidence 0 011 00000 0 111 0110000000000000 00122334566777777776 99 999 89999
Q ss_pred EEEEeCC---EEE-EE---eCCCc--EEEeceEEecCCCCccc
Q 010693 196 HVNHQEF---ESS-IV---CDDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 196 ~i~~~~~---~~~-v~---~~~g~--~i~a~~vI~A~G~~s~v 229 (503)
++..+++ .+. |. ..+|+ .+.|+.||+|+|..+.+
T Consensus 178 ~L~~~~~~~g~v~Gv~~~~~~~g~~~~i~A~~VVlAtGG~~~~ 220 (643)
T 1jnr_A 178 ELLKDNNDPNAVAGAVGFSVREPKFYVFKAKAVILATGGATLL 220 (643)
T ss_dssp EEEECTTCTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred EEEEcCCccceeEEEEEEEecCCcEEEEEcCEEEECCCccccc
Confidence 9988765 442 22 24565 69999999999988753
No 127
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.74 E-value=1.3e-08 Score=108.83 Aligned_cols=116 Identities=11% Similarity=0.134 Sum_probs=76.5
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcc
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKT 159 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (503)
.+...||+|||||+||+++|..|++ . |++|+|||+.+...+.. ++.. . .+. ....
T Consensus 33 ~~~~~~VvIIGgG~AGl~aA~~L~~-~~~g~~V~vie~~~~~~~~~-~~lp--~--------~~~-----------g~~~ 89 (588)
T 3ics_A 33 RWGSRKIVVVGGVAGGASVAARLRR-LSEEDEIIMVERGEYISFAN-CGLP--Y--------YIG-----------GVIT 89 (588)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHH-HCSSSEEEEECSSSCSSBCG-GGHH--H--------HHT-----------TSSC
T ss_pred cccCCCEEEECCcHHHHHHHHHHHh-hCcCCCEEEEECCCCccccC-CCCc--h--------hhc-----------CcCC
Confidence 3456899999999999999999999 7 89999999977543211 1110 0 000 0000
Q ss_pred cccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe-CCCc--EEEeceEEecCCCCccc
Q 010693 160 KYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC-DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 160 ~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vI~A~G~~s~v 229 (503)
.... .+...+...+...|++++ +++|++++.++..+.+.. .+|+ ++.+|.||.|+|.....
T Consensus 90 ----~~~~-----~~~~~~~~~~~~~gi~v~~~~~V~~id~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~ 154 (588)
T 3ics_A 90 ----ERQK-----LLVQTVERMSKRFNLDIRVLSEVVKINKEEKTITIKNVTTNETYNEAYDVLILSPGAKPIV 154 (588)
T ss_dssp ----CGGG-----GBSSCHHHHHHHTTCEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred ----ChHH-----hhccCHHHHHHhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEeCCEEEECCCCCCCC
Confidence 0000 011122223345799998 999999998888877765 4565 78999999999975543
No 128
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.74 E-value=8.6e-09 Score=107.12 Aligned_cols=138 Identities=16% Similarity=0.157 Sum_probs=76.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhH--hhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVD--EFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
+|||+||||||||+++|..|++ .|++|+|||+.+..+.. .++|+... .+....+.+.+........+...... .
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~~~GG~~~~~g~~psk~l~~~~~~~~~~~~~~~~~g~~~~~~~--~ 78 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQ-LGMKTACVEKRGALGGTCLNVGCIPSKALLHATHLYHDAHANFARYGLMGGEGV--T 78 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHTHHHHTEECGGGC--E
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCCcCCcCCCcCcHhHHHHHHHHHHHHHHHHHHHhcCcccCCCC--c
Confidence 5899999999999999999999 99999999987543210 01111110 01110110001000000011100000 0
Q ss_pred cCCCccc-cCH-----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCCccc
Q 010693 162 LDRPYGR-VSR-----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~s~v 229 (503)
. .+.. ..+ ..+...+.+.+.+.|++++..++..+ +.+.+.|.+.+| .++.+|.||.|+|.....
T Consensus 79 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~i--~~~~~~v~~~~G~~~~~~~d~lviAtG~~p~~ 150 (468)
T 2qae_A 79 M--DSAKMQQQKERAVKGLTGGVEYLFKKNKVTYYKGEGSFE--TAHSIRVNGLDGKQEMLETKKTIIATGSEPTE 150 (468)
T ss_dssp E--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEEEEEE--ETTEEEEEETTSCEEEEEEEEEEECCCEEECC
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEe--eCCEEEEEecCCceEEEEcCEEEECCCCCcCC
Confidence 0 1111 111 12333445556667999983333333 456788888888 689999999999986544
No 129
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=98.74 E-value=2.1e-08 Score=104.58 Aligned_cols=139 Identities=18% Similarity=0.228 Sum_probs=74.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC---CCCccc-chhH------h-h-hhcCchhhhhhccCce
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST---WPNNYG-VWVD------E-F-EDIGLVDCLDKTWPMT 150 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~---~~~~~g-~~~~------~-l-~~~~~~~~~~~~~~~~ 150 (503)
+.+|||+||||||||+++|+.|++ .|++|+|||+..... .....| .|.. . + ........+... ...
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~-~G~~V~liEk~~~~~~~~~~~~~GG~c~~~gciPsk~l~~~~~~~~~~~~~-~~~ 84 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVL-NGARVACLDFVKPTPTLGTKWGVGGTCVNVGCIPKKLMHQASLLGEAVHEA-AAY 84 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCCCCTTTTCCCCSSCHHHHHSHHHHHHHHHHHHHHHHHHHH-HHT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHH-CCCEEEEEEeccccccccccCCcCCeecccCchhhHHHHHHHHHHHHHHHH-Hhc
Confidence 457999999999999999999999 999999999642211 000121 1211 0 0 000000000000 000
Q ss_pred EEEecCCcccccCCCcccc-C-H----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCc-EEEeceEEecC
Q 010693 151 CVFINDHKTKYLDRPYGRV-S-R----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGN-EIKASLIVDAS 223 (503)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v-~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~-~i~a~~vI~A~ 223 (503)
.+.+... ....+..+ . . ..+...+...+...|++++...+..+ +...+.|.+.+|. ++.+|.||.|+
T Consensus 85 g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~a~~~--~~~~v~v~~~~g~~~~~~d~lviAT 158 (483)
T 3dgh_A 85 GWNVDDK----IKPDWHKLVQSVQNHIKSVNWVTRVDLRDKKVEYINGLGSFV--DSHTLLAKLKSGERTITAQTFVIAV 158 (483)
T ss_dssp TBCCCCC----CCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECSEEEEE--ETTEEEEECTTCCEEEEEEEEEECC
T ss_pred CcccCCc----CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEc--cCCEEEEEeCCCeEEEEcCEEEEeC
Confidence 0000000 00011000 0 0 12222233445568999984444433 3557788887775 79999999999
Q ss_pred CCCccc
Q 010693 224 GFASSF 229 (503)
Q Consensus 224 G~~s~v 229 (503)
|.....
T Consensus 159 Gs~p~~ 164 (483)
T 3dgh_A 159 GGRPRY 164 (483)
T ss_dssp CEEECC
T ss_pred CCCcCC
Confidence 965543
No 130
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=98.73 E-value=3e-08 Score=106.79 Aligned_cols=59 Identities=14% Similarity=0.041 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHhC--CcEEE-EeEEEEEEEeCC---EEE-E--E-eCCCc--EEEeceEEecCCCCccc
Q 010693 171 RNILKTKLLENCVSN--GVKFH-KAKVWHVNHQEF---ESS-I--V-CDDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 171 r~~l~~~L~~~~~~~--gv~~~-~~~v~~i~~~~~---~~~-v--~-~~~g~--~i~a~~vI~A~G~~s~v 229 (503)
...+...|.+.+++. |++++ ++.|+++..+++ .+. | . ..+|+ .+.|+.||+|+|..+.+
T Consensus 165 G~~i~~~L~~~a~~~~~gV~i~~~~~v~dLi~~~~~~g~v~Gv~~~~~~~g~~~~i~Ak~VVLATGG~g~~ 235 (662)
T 3gyx_A 165 GESYKVIVAEAAKNALGQDRIIERIFIVKLLLDKNTPNRIAGAVGFNLRANEVHIFKANAMVVACGGAVNV 235 (662)
T ss_dssp ETSHHHHHHHHHHHHHCTTTEECSEEECCCEECSSSTTBEEEEEEEESSSSCEEEEECSEEEECCCCBCSS
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEceEEEEEEEeCCccceEEEEEEEEcCCCcEEEEEeCEEEECCCccccc
Confidence 456777888888776 99999 899999988765 432 2 2 23454 58999999999987754
No 131
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=98.73 E-value=3.3e-09 Score=110.53 Aligned_cols=138 Identities=15% Similarity=0.153 Sum_probs=73.3
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhH-h-hhhcCchhhhhhccCceEEEecCCcc
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVD-E-FEDIGLVDCLDKTWPMTCVFINDHKT 159 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~-~-l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (503)
.+.+|||+||||||||+++|+.|++ .|++|+|||++...+...++|+... . +........+... ....+ ...
T Consensus 17 ~~~~~dVvIIGgG~aGl~aA~~la~-~G~~V~liE~~~~GG~~~~~gc~p~k~l~~~~~~~~~~~~~-~~~g~--~~~-- 90 (478)
T 3dk9_A 17 AVASYDYLVIGGGSGGLASARRAAE-LGARAAVVESHKLGGTCVNVGCVPKKVMWNTAVHSEFMHDH-ADYGF--PSC-- 90 (478)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTTT-TTTTS--CCC--
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCCCCcccccCccchHHHHHHHHHHHHHHHH-HhcCc--cCC--
Confidence 4457999999999999999999999 9999999997532111111111110 0 0000000000000 00000 000
Q ss_pred cccCCCcccc-C-----HHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 160 KYLDRPYGRV-S-----RNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 160 ~~~~~~~~~v-~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
.....+..+ . ...+...+...+...|++++..++..+... ...|. .+|+++++|.||.|+|.....
T Consensus 91 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~~~~~--~~~v~-~~g~~~~~d~lviAtG~~p~~ 162 (478)
T 3dk9_A 91 -EGKFNWRVIKEKRDAYVSRLNAIYQNNLTKSHIEIIRGHAAFTSDP--KPTIE-VSGKKYTAPHILIATGGMPST 162 (478)
T ss_dssp -CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEECSCS--SCEEE-ETTEEEECSCEEECCCEEECC
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCcEEEEeEEEEeeCC--eEEEE-ECCEEEEeeEEEEccCCCCCC
Confidence 000011110 0 123344455556678999985445444322 23444 456789999999999975543
No 132
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.73 E-value=2.3e-08 Score=104.16 Aligned_cols=143 Identities=18% Similarity=0.121 Sum_probs=75.6
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhH-hh-hhcCchhhhhhccCceEEEecCCccc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVD-EF-EDIGLVDCLDKTWPMTCVFINDHKTK 160 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~-~l-~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (503)
+.++||+||||||||+++|..|++ .|.+|+|||+++..+...+.|+... .+ ....+...+.. .....+........
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~-~g~~V~liE~~~~GG~~~n~gciP~k~l~~~~~~~~~~~~-~~~~g~~~~~~~~~ 86 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAAS-YGAKTLLVEAKALGGTCVNVGCVPKKVMWYASDLATRVSH-ANEYGLYQNLPLDK 86 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHH-TSCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHTT-TTTTTBSTTSCCSG
T ss_pred cccCCEEEEcCCHHHHHHHHHHHH-CCCcEEEEeCCCcCCcCcccCcHHHHHHHHHHHHHHHHHh-HHhcCccccccccc
Confidence 346999999999999999999999 9999999998631110001111110 00 00000000000 00000000000000
Q ss_pred -ccCCCccc-cC-----HHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCc--EEEeceEEecCCCCccc
Q 010693 161 -YLDRPYGR-VS-----RNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 161 -~~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~--~i~a~~vI~A~G~~s~v 229 (503)
.....+.. .. ...+...+.+.+.+.|++++..++..+ +.+.+.|.+.+|+ ++.+|.||.|+|.....
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i--~~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 162 (479)
T 2hqm_A 87 EHLTFNWPEFKQKRDAYVHRLNGIYQKNLEKEKVDVVFGWARFN--KDGNVEVQKRDNTTEVYSANHILVATGGKAIF 162 (479)
T ss_dssp GGCCBCHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEEC--TTSCEEEEESSSCCEEEEEEEEEECCCEEECC
T ss_pred ccCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEe--eCCEEEEEeCCCcEEEEEeCEEEEcCCCCCCC
Confidence 00001110 00 122334455556678999984456554 3456777777776 89999999999976543
No 133
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=98.73 E-value=1.1e-08 Score=103.56 Aligned_cols=112 Identities=14% Similarity=0.233 Sum_probs=74.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
...+..|+|||||+||+++|..|++ .+.+|+|||+.+...+.+ ..+.. .+.. ......
T Consensus 6 ~~~~~~~vIvGgG~AGl~aA~~L~~-~~~~itlie~~~~~~y~~------~~l~~-----~l~g----------~~~~~~ 63 (385)
T 3klj_A 6 HHKSTKILILGAGPAGFSAAKAALG-KCDDITMINSEKYLPYYR------PRLNE-----IIAK----------NKSIDD 63 (385)
T ss_dssp --CBCSEEEECCSHHHHHHHHHHTT-TCSCEEEECSSSSCCBCG------GGHHH-----HHHS----------CCCGGG
T ss_pred ccCCCCEEEEcCcHHHHHHHHHHhC-CCCEEEEEECCCCCCccc------ChhhH-----HHcC----------CCCHHH
Confidence 4456889999999999999999988 999999999876533211 01100 1100 000000
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 162 LDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
+ ... ..+.+.+.|++++ +++|++++.++. .|++.+|+++.+|.||.|+|.....
T Consensus 64 l-----~~~-------~~~~~~~~~i~~~~~~~V~~id~~~~--~v~~~~g~~~~yd~lvlAtG~~p~~ 118 (385)
T 3klj_A 64 I-----LIK-------KNDWYEKNNIKVITSEFATSIDPNNK--LVTLKSGEKIKYEKLIIASGSIANK 118 (385)
T ss_dssp T-----BSS-------CHHHHHHTTCEEECSCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred c-----cCC-------CHHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEecCCCcCC
Confidence 0 001 1112235799999 899999987665 4677889899999999999975543
No 134
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=98.72 E-value=7.3e-09 Score=108.27 Aligned_cols=138 Identities=20% Similarity=0.179 Sum_probs=75.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC--Cccc-chhHh-------h-hhcCchhhhhhccCceE
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP--NNYG-VWVDE-------F-EDIGLVDCLDKTWPMTC 151 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~--~~~g-~~~~~-------l-~~~~~~~~~~~~~~~~~ 151 (503)
..+|||+||||||||+++|..|++ .|++|+|||+.+...+. ...| .|... + ........+... ....
T Consensus 4 ~~~~DvvVIG~G~aGl~aA~~la~-~G~~V~liEk~~~~~~~~~~~~GGtc~~~gciPsk~l~~~~~~~~~~~~~-~~~g 81 (488)
T 3dgz_A 4 QQSFDLLVIGGGSGGLACAKEAAQ-LGKKVAVADYVEPSPRGTKWGLGGTCVNVGCIPKKLMHQAALLGGMIRDA-HHYG 81 (488)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCCCCCTTSCCCCTTCHHHHHSHHHHHHHHHHHHHHHHHHHH-HHTT
T ss_pred CCcCCEEEECCCHHHHHHHHHHHh-CCCeEEEEEecccccccccCCcCCeecccCCcccHHHHHHHHHHHHHHHH-HhcC
Confidence 346999999999999999999999 99999999985432211 1122 22110 0 000000000000 0000
Q ss_pred EEecCCcccccCCCccc-cCH-----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecC
Q 010693 152 VFINDHKTKYLDRPYGR-VSR-----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDG--NEIKASLIVDAS 223 (503)
Q Consensus 152 ~~~~~~~~~~~~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~ 223 (503)
+..... ....+.. +.+ ..+...+...+...|++++..++..+ +...+.|.+.+| .++.+|.||.|+
T Consensus 82 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~g~~~~~--~~~~v~v~~~~g~~~~~~~d~lViAT 155 (488)
T 3dgz_A 82 WEVAQP----VQHNWKTMAEAVQNHVKSLNWGHRVQLQDRKVKYFNIKASFV--DEHTVRGVDKGGKATLLSAEHIVIAT 155 (488)
T ss_dssp CCCCSS----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECCEEEES--SSSEEEEECTTSCEEEEEEEEEEECC
T ss_pred cccCCc----CccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEc--cCCeEEEEeCCCceEEEECCEEEEcC
Confidence 000000 0001111 111 12223344445668999985555443 345677777777 479999999999
Q ss_pred CCCcc
Q 010693 224 GFASS 228 (503)
Q Consensus 224 G~~s~ 228 (503)
|....
T Consensus 156 Gs~p~ 160 (488)
T 3dgz_A 156 GGRPR 160 (488)
T ss_dssp CEEEC
T ss_pred CCCCC
Confidence 97554
No 135
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.72 E-value=5.3e-08 Score=101.49 Aligned_cols=112 Identities=15% Similarity=0.252 Sum_probs=73.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
++||+|||||+||+++|..|++ . |.+|+|||+.+...+ ..|+. .. .+.... .+. ..+
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~-~~~g~~V~lie~~~~~~~-~~~~~--~~--------~~~~~~-------~~~--~~l 94 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVR-NDENANVVTLEKGEIYSY-AQCGL--PY--------VISGAI-------AST--EKL 94 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-HCTTCEEEEECSSSCCSB-CGGGH--HH--------HHTTSS-------SCG--GGG
T ss_pred cceEEEECCCHHHHHHHHHHHh-hCcCCcEEEEECCCCCCC-CCCCc--ch--------hhcCCc-------CCH--HHh
Confidence 4799999999999999999998 6 899999998764321 11111 10 000000 000 000
Q ss_pred CCCccccCHHHHHHHHHHHH-HhCCcEEE-EeEEEEEEEeCCEEEEEe-CCCc--EEEeceEEecCCCCccc
Q 010693 163 DRPYGRVSRNILKTKLLENC-VSNGVKFH-KAKVWHVNHQEFESSIVC-DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~-~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vI~A~G~~s~v 229 (503)
+.+ ..+.+ ...|++++ +++|+.++.+++.+.+.. .+|+ ++.+|.||.|+|..+..
T Consensus 95 ------~~~------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~v~~~~~g~~~~~~~d~lviAtG~~p~~ 154 (480)
T 3cgb_A 95 ------IAR------NVKTFRDKYGIDAKVRHEVTKVDTEKKIVYAEHTKTKDVFEFSYDRLLIATGVRPVM 154 (480)
T ss_dssp ------BSS------CHHHHHHTTCCEEESSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred ------hhc------CHHHHHhhcCCEEEeCCEEEEEECCCCEEEEEEcCCCceEEEEcCEEEECCCCcccC
Confidence 000 01122 33599999 899999988777777765 4566 79999999999976644
No 136
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.72 E-value=3.4e-08 Score=103.16 Aligned_cols=113 Identities=13% Similarity=0.129 Sum_probs=72.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCC---CcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHS---VKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTK 160 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G---~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (503)
.++||+|||||+||+++|..|++ .| .+|+|||+.+...+ ..|+. .. .+.... ....
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~-~g~~~~~V~lie~~~~~~~-~~~~~--~~--------~~~~~~-------~~~~-- 92 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLT-NYGDANEIVVFDQNSNISF-LGAGM--AL--------WIGEQI-------AGPE-- 92 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-HHGGGSEEEEECSSSCCSB-CGGGH--HH--------HHTTSS-------SCSG--
T ss_pred cCCcEEEECCCHHHHHHHHHHHh-cCCCCCeEEEEECCCCCCc-ccccc--ch--------hhcCcc-------CCHH--
Confidence 35899999999999999999999 88 99999998764321 11111 00 000000 0000
Q ss_pred ccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC-CCcEEEeceEEecCCCCccc
Q 010693 161 YLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD-DGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 161 ~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~g~~i~a~~vI~A~G~~s~v 229 (503)
.+ ... +.+.+.+.|++++ +++|+.++.+++.+.+..+ ++.++.+|.||.|+|..+..
T Consensus 93 ~~-----~~~-------~~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~g~~~~~~~d~lviAtG~~p~~ 151 (490)
T 2bc0_A 93 GL-----FYS-------DKEELESLGAKVYMESPVQSIDYDAKTVTALVDGKNHVETYDKLIFATGSQPIL 151 (490)
T ss_dssp GG-----BSC-------CHHHHHHTTCEEETTCCEEEEETTTTEEEEEETTEEEEEECSEEEECCCEEECC
T ss_pred Hh-----hhc-------CHHHHHhCCCEEEeCCEEEEEECCCCEEEEEeCCcEEEEECCEEEECCCCCcCC
Confidence 00 000 1122345799998 8999999877777666522 23479999999999976544
No 137
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.72 E-value=1.8e-08 Score=103.01 Aligned_cols=111 Identities=19% Similarity=0.256 Sum_probs=73.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCc--EEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVK--VCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~--V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
.++||+|||||+||+++|..|++ .|++ |+|||+.+...+.+. .+.. ..+ .....
T Consensus 8 ~~~~vvIIGaG~aGl~aA~~L~~-~g~~~~V~lie~~~~~~y~~~------~l~~----~~~-----------~~~~~-- 63 (415)
T 3lxd_A 8 ERADVVIVGAGHGGAQAAIALRQ-NGFEGRVLVIGREPEIPYERP------PLSK----EYL-----------AREKT-- 63 (415)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCSCEEEEESSSSCCBCSG------GGGT----TTT-----------TTSSC--
T ss_pred CCCcEEEECChHHHHHHHHHHHc-cCcCCCEEEEecCCCCCcCcc------cCCH----HHH-----------cCCCC--
Confidence 46899999999999999999999 9987 999998764332111 0000 000 00000
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 162 LDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
.... ... ..+...+.|++++ +++|+.++.++. .|.+.+|+++.+|.+|.|+|.....
T Consensus 64 -~~~~-~~~-------~~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~~~~ 121 (415)
T 3lxd_A 64 -FERI-CIR-------PAQFWEDKAVEMKLGAEVVSLDPAAH--TVKLGDGSAIEYGKLIWATGGDPRR 121 (415)
T ss_dssp -SGGG-BSS-------CHHHHHHTTEEEEETCCEEEEETTTT--EEEETTSCEEEEEEEEECCCEECCC
T ss_pred -HHHh-ccC-------CHHHHHHCCcEEEeCCEEEEEECCCC--EEEECCCCEEEeeEEEEccCCccCC
Confidence 0000 011 1122335799999 789999986654 5667888899999999999975543
No 138
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=98.72 E-value=1.2e-08 Score=105.08 Aligned_cols=111 Identities=16% Similarity=0.242 Sum_probs=76.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHc--cCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSS--RHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~--~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
+.||+|||||+||+++|..|++ ..|++|+|||+.+...+. ..+ .. +..
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~~~~~~~~---~~~-~~---------~~~----------------- 53 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGHEVTLISANDYFQFV---PSN-PW---------VGV----------------- 53 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECSSSEEECG---GGH-HH---------HHH-----------------
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeCCCCCccc---CCc-cc---------ccc-----------------
Confidence 4799999999999999999987 258999999987531110 000 00 000
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFVE 231 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr~ 231 (503)
+..+...+...+.+.+.+.|++++..+|+.++.++. .|.+++|+++.+|.||.|+|..+....
T Consensus 54 ----g~~~~~~~~~~l~~~~~~~gv~~~~~~v~~id~~~~--~V~~~~g~~i~~d~lviAtG~~~~~~~ 116 (437)
T 3sx6_A 54 ----GWKERDDIAFPIRHYVERKGIHFIAQSAEQIDAEAQ--NITLADGNTVHYDYLMIATGPKLAFEN 116 (437)
T ss_dssp ----TSSCHHHHEEECHHHHHTTTCEEECSCEEEEETTTT--EEEETTSCEEECSEEEECCCCEECGGG
T ss_pred ----CccCHHHHHHHHHHHHHHCCCEEEEeEEEEEEcCCC--EEEECCCCEEECCEEEECCCCCcCccc
Confidence 011222233334455556899999779999987655 567788889999999999998765443
No 139
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.71 E-value=2.2e-08 Score=103.50 Aligned_cols=112 Identities=13% Similarity=0.103 Sum_probs=72.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
+||+|||||+||+++|..|++ . |.+|+|||+.+..++.. ++... .+ ..... ..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~-~~~g~~V~vie~~~~~g~~~-~~~~~----------~~-----------~~~~~-~~- 57 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRK-KYPQAEISLIDKQATVGYLS-GGLSA----------YF-----------NHTIN-EL- 57 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HCSSSEEEEECSSSCCSSCC-C------------------------------------
T ss_pred CCEEEECCCHHHHHHHHHHHh-hCcCCcEEEEECCCCCcccC-ccchh----------hh-----------cCCCC-CH-
Confidence 699999999999999999999 7 89999999877543211 11000 00 00000 00
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC-CCcEEEeceEEecCCCCcccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD-DGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~g~~i~a~~vI~A~G~~s~vr 230 (503)
.... ..+.+.+.+.|++++ +++|+.++.++..+.+... ++.++.+|.+|.|+|......
T Consensus 58 ~~~~--------~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~v~~~~~~~~~~~d~lviAtG~~p~~p 118 (452)
T 3oc4_A 58 HEAR--------YITEEELRRQKIQLLLNREVVAMDVENQLIAWTRKEEQQWYSYDKLILATGASQFST 118 (452)
T ss_dssp ---C--------CCCHHHHHHTTEEEECSCEEEEEETTTTEEEEEETTEEEEEECSEEEECCCCCBCCC
T ss_pred HHhh--------cCCHHHHHHCCCEEEECCEEEEEECCCCEEEEEecCceEEEEcCEEEECCCcccCCC
Confidence 0000 001122345799998 9999999988887777532 455799999999999866543
No 140
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=98.70 E-value=3.3e-08 Score=97.97 Aligned_cols=112 Identities=19% Similarity=0.159 Sum_probs=72.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCc-------------ccc---------hhHhhhhcCchhhh
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNN-------------YGV---------WVDEFEDIGLVDCL 143 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~-------------~g~---------~~~~l~~~~~~~~~ 143 (503)
+||+|||||+||+.+|+.|++ .|.+|+|+|+++....+.+ .|. ...+++.+|-. +
T Consensus 2 ~dViVIGgG~AG~~AA~~la~-~G~~V~liE~~~~~~tp~h~~d~i~eL~CnpSigG~~~~~akGlL~~EIdaLGg~--m 78 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLR-LGVPVRLFEMRPKRMTPAHGTDRFAEIVCSNSLGGEGETNAKGLLQAEMRRAGSL--V 78 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEECCTTTSCCSSCCSSCTTCCCSCCEEEECSTTCHHHHHHHHHHHHTCH--H
T ss_pred CCEEEECchHHHHHHHHHHHH-CCCcEEEEeccCCcCCccccCCCccccccCcCCCccccccchhHHHHHHHHcCCh--H
Confidence 799999999999999999999 9999999998874332211 111 12223333221 0
Q ss_pred hhccCceEEEecCCcccccCCCccccCHHHHHHHHHHHHHh-CCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEec
Q 010693 144 DKTWPMTCVFINDHKTKYLDRPYGRVSRNILKTKLLENCVS-NGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDA 222 (503)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~-~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A 222 (503)
...-....+ +.. .-..++|..+.+.+.+.+.+ .++++++.+|+++. ++.||.|
T Consensus 79 ~~~aD~~~i--pAg-------~al~vDR~~f~~~~~~~le~~pni~l~q~eV~~l~-----------------~~~vIia 132 (443)
T 3g5s_A 79 MEAADLARV--PAG-------GALAVDREEFSGYITERLTGHPLLEVVREEVREIP-----------------PGITVLA 132 (443)
T ss_dssp HHHHHHSEE--CCT-------TEEEECHHHHHHHHHHHHHTCTTEEEECSCCCSCC-----------------SSSEEEC
T ss_pred hhhhhhcCC--CCC-------ccccCCcHHHHHHHHHHHHcCCCeEEEhhhhhhhc-----------------CCCEEEe
Confidence 000001111 111 11249999999999999987 78999877777664 3467777
Q ss_pred CCCC
Q 010693 223 SGFA 226 (503)
Q Consensus 223 ~G~~ 226 (503)
+|..
T Consensus 133 tG~~ 136 (443)
T 3g5s_A 133 TGPL 136 (443)
T ss_dssp CCTT
T ss_pred CCCC
Confidence 7753
No 141
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.70 E-value=3.1e-08 Score=103.05 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=65.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
+.||+|||||+||+++|..|++ . |++|+|||+.+...+.. ++. ...+...+ ... . .+
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~-~~~g~~Vtvie~~~~~~~~~-~gl----------~~~~~g~~-------~~~-~-~~ 61 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKR-LDPEAHVTMIDQASRISYGG-CGI----------PYYVSGEV-------SNI-E-SL 61 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHH-HCTTSEEEEECCC--------------------------------------------
T ss_pred CCcEEEECCCHHHHHHHHHHHh-hCcCCCEEEEECCCcccccc-ccc----------chhhcCCC-------Cch-H-Hh
Confidence 4799999999999999999999 7 99999999876543210 110 00000000 000 0 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe-CCCc--EEEeceEEecCCCCccc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC-DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vI~A~G~~s~v 229 (503)
.++ +..+...+...+...|++++ +++|++++.++..+.+.. .+|. ++.+|.+|.|+|.....
T Consensus 62 -~~~----~~~~~~~~~~~~~~~gi~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 127 (472)
T 3iwa_A 62 -QAT----PYNVVRDPEFFRINKDVEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANR 127 (472)
T ss_dssp ------------------------CEEECSEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred -ccc----cchhccCHHHHhhhcCcEEEECCEEEEEECCCCEEEEeecCCCCEEEEECCEEEEeCCCCcCC
Confidence 000 00012222222334689998 899999998888777765 3355 79999999999975543
No 142
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.69 E-value=1.4e-08 Score=105.13 Aligned_cols=134 Identities=19% Similarity=0.193 Sum_probs=73.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhH--hhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVD--EFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
+|||+||||||||+++|..|++ .|++|+|||+++..+.. .++|+... .+....+.+.+.. ....+.+... .
T Consensus 1 ~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~--~~~g~~~~~~---~ 74 (455)
T 2yqu_A 1 MYDLLVIGAGPGGYVAAIRAAQ-LGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKK--GLLGAKVKGV---E 74 (455)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSSSSHHHHHHSHHHHHHHHHHHHHHHHHHH--CCTTEEECCE---E
T ss_pred CCCEEEECCChhHHHHHHHHHH-CCCeEEEEeCCCCCCCccceecchhHHHHHHHHHHHHHHhh--hcCCcccCCC---c
Confidence 3899999999999999999999 99999999987543210 01111110 0111111111111 1111111110 0
Q ss_pred cCCCccc-cC-H----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 162 LDRPYGR-VS-R----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~-v~-r----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
. .+.. +. + ..+...+.+.+.+.|++++..++.. .+.+.+.|.+ +|.++.+|.||.|+|..+..
T Consensus 75 ~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~v~~~~g~~~~--i~~~~~~v~~-~g~~~~~d~lviAtG~~p~~ 143 (455)
T 2yqu_A 75 L--DLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARF--LSERKVLVEE-TGEELEARYILIATGSAPLI 143 (455)
T ss_dssp E--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEE--SSSSEEEETT-TCCEEEEEEEEECCCEEECC
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEE--ecCCeEEEee-CCEEEEecEEEECCCCCCCC
Confidence 0 1111 11 1 1233334555666799998333322 2345666655 67889999999999986544
No 143
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.69 E-value=1.2e-08 Score=105.99 Aligned_cols=134 Identities=15% Similarity=0.157 Sum_probs=72.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHh--hhhcCchhhhhhccCceEEEecCCcccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDE--FEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~--l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
.+|||+||||||+|+++|+.|++ .|++|+|||+....+...++|+.... +........+.. .....+..... .
T Consensus 4 ~~~DVvVIGaG~aGl~aA~~la~-~G~~V~liEk~~~GG~~~~~gcip~k~l~~~~~~~~~~~~-~~~~g~~~~~~---~ 78 (463)
T 4dna_A 4 FDYDLFVIGGGSGGVRSGRLAAA-LGKKVAIAEEFRYGGTCVIRGCVPKKLYVYASQFAEHFED-AAGFGWTVGES---R 78 (463)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTEEECCC---E
T ss_pred CCCcEEEECcCHHHHHHHHHHHh-CCCEEEEEeCCCCCCcccccCchhhHHHHHHHHHHHHHHH-HHhcCcccCCC---C
Confidence 36999999999999999999999 99999999983211110111111110 000011111110 11111111111 0
Q ss_pred cCCCccc-cC-----HHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEe-CCCcEEEeceEEecCCCCcc
Q 010693 162 LDRPYGR-VS-----RNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVC-DDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 162 ~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~-~~g~~i~a~~vI~A~G~~s~ 228 (503)
. .+.. +. ...+...+.+.+.+.|++++..++..++ .. .+.+ .+++++.+|.+|.|+|....
T Consensus 79 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~--~v~~~~~~~~~~~d~lviAtG~~p~ 146 (463)
T 4dna_A 79 F--DWAKLVAAKEQEIARLEGLYRKGLANAGAEILDTRAELAG--PN--TVKLLASGKTVTAERIVIAVGGHPS 146 (463)
T ss_dssp E--CHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEESCEEESS--SS--EEEETTTTEEEEEEEEEECCCEEEC
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEEEEee--CC--EEEEecCCeEEEeCEEEEecCCCcc
Confidence 0 1110 11 1234445555666679999855555442 22 3444 46778999999999997654
No 144
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=98.68 E-value=2.7e-08 Score=104.20 Aligned_cols=146 Identities=13% Similarity=0.096 Sum_probs=86.4
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHccCC--------------CcEEEEcCCCCCCCCCcccchhHhhhhc--Cc-hhhh
Q 010693 81 SDRIRYDVIIIGTGPAGLRLAEQVSSRHS--------------VKVCCVDPSPLSTWPNNYGVWVDEFEDI--GL-VDCL 143 (503)
Q Consensus 81 ~~~~~~DvvIVGgGpaGl~~A~~La~~~G--------------~~V~viE~~~~~~~~~~~g~~~~~l~~~--~~-~~~~ 143 (503)
++...|||||||+||+||++|..|.+ .| ..++.+|+.+...|... ...+. ..+ .+ .+++
T Consensus 35 p~~~i~Dvi~IGaGp~gLa~A~~L~~-~~~~~~~~~~~~~~~~~~~~f~e~~~~f~Wh~g--~~~p~-~~~q~~fl~Dlv 110 (501)
T 4b63_A 35 PQDELHDLLCVGFGPASLAIAIALHD-ALDPRLNKSASNIHAQPKICFLERQKQFAWHSG--MLVPG-SKMQISFIKDLA 110 (501)
T ss_dssp CTTSCEEEEEECCSHHHHHHHHHHHH-HHCTTTCTTC----CCCCEEEEESSSSCCSSGG--GCCTT-CBCSSCGGGSSS
T ss_pred CCCCcCcEEEEcccHHHHHHHHHHHh-cCCCceEEeccccCCCcceeeEeccCCCCcCCC--CCCCC-ccccccchhhhc
Confidence 45567999999999999999999987 44 45677777665544221 10000 000 00 1111
Q ss_pred hhccCceEEEecCC----c--ccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC--------CEEEEEe
Q 010693 144 DKTWPMTCVFINDH----K--TKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQE--------FESSIVC 208 (503)
Q Consensus 144 ~~~~~~~~~~~~~~----~--~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~--------~~~~v~~ 208 (503)
.-..+...+.|.+. . -........+..|..+.++|...+...+..++ +++|+++...+ +.+.|++
T Consensus 111 tl~~P~s~~sf~~yl~~~~rl~~f~~~~~~~p~r~E~~~Yl~~~A~~~~~~vrf~~~V~~v~~~~~~~~~~~~~~~~V~~ 190 (501)
T 4b63_A 111 TLRDPRSSFTFLNYLHQKGRLIHFTNLSTFLPARLEFEDYMRWCAQQFSDVVAYGEEVVEVIPGKSDPSSSVVDFFTVRS 190 (501)
T ss_dssp TTTCTTCTTSHHHHHHHHTCHHHHHTTCCSCCBHHHHHHHHHHHHHTTGGGEEESEEEEEEEEECSSTTSSCBCEEEEEE
T ss_pred cccCCCCccchHHHHHHhCCccCCccccCCCCCHHHHHHHHHHHHHHcCCceEcceEEEeeccccccccccccceEEEEE
Confidence 10000000000000 0 00011122246789999999998888777777 99999998754 2578887
Q ss_pred CCC-----cEEEeceEEecCCCCcccc
Q 010693 209 DDG-----NEIKASLIVDASGFASSFV 230 (503)
Q Consensus 209 ~~g-----~~i~a~~vI~A~G~~s~vr 230 (503)
.++ +++.|+.||.|+|....+.
T Consensus 191 ~~~~~g~~~~~~ar~vVlatG~~P~iP 217 (501)
T 4b63_A 191 RNVETGEISARRTRKVVIAIGGTAKMP 217 (501)
T ss_dssp EETTTCCEEEEEEEEEEECCCCEECCC
T ss_pred ecCCCceEEEEEeCEEEECcCCCCCCC
Confidence 653 2689999999999655443
No 145
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.68 E-value=1.9e-08 Score=104.54 Aligned_cols=136 Identities=10% Similarity=0.095 Sum_probs=73.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhH-h-hhhcCchhhhh-hccC-ceEEEecCCcc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVD-E-FEDIGLVDCLD-KTWP-MTCVFINDHKT 159 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~-~-l~~~~~~~~~~-~~~~-~~~~~~~~~~~ 159 (503)
.++||+||||||+|+++|..|++ .|++|+|||++...+...+.|+... . +....+..... ..+. +. ...
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~lie~~~~GG~~~~~g~ip~k~l~~~~~~~~~~~~~~~~~g~----~~~-- 75 (467)
T 1zk7_A 3 PPVQVAVIGSGGAAMAAALKAVE-QGAQVTLIERGTIGGTCVNVGCVPSKIMIRAAHIAHLRRESPFDGGI----AAT-- 75 (467)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSTTHHHHHHSHHHHHHHHHHHHHHHHHHCCTTTTTS----CCC--
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCCCCccccCCCccchHHHHHHHHHHHHHhhhhhcCCc----cCC--
Confidence 36899999999999999999999 9999999998631110011111100 0 00000000000 0000 00 000
Q ss_pred cccCCCccc-cC-HHHHHHHH-----HHHHHhC-CcEEEEeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCCccc
Q 010693 160 KYLDRPYGR-VS-RNILKTKL-----LENCVSN-GVKFHKAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFASSF 229 (503)
Q Consensus 160 ~~~~~~~~~-v~-r~~l~~~L-----~~~~~~~-gv~~~~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~s~v 229 (503)
.....+.. +. ...+.+.+ .+.+.+. |++++..++..++ .+.+.|.+.+| .++++|.||.|+|....+
T Consensus 76 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~~~~~~--~~~~~v~~~~g~~~~~~~d~lviAtGs~p~~ 152 (467)
T 1zk7_A 76 -VPTIDRSKLLAQQQARVDELRHAKYEGILGGNPAITVVHGEARFKD--DQSLTVRLNEGGERVVMFDRCLVATGASPAV 152 (467)
T ss_dssp -CCCCCHHHHHHHHHHHHHHHHHHHTHHHHTTCTTEEEEEEEEEEEE--TTEEEEEETTSSEEEEECSEEEECCCEEECC
T ss_pred -CCccCHHHHHHHHHHHHHHHhhhhHHHHHhccCCeEEEEEEEEEcc--CCEEEEEeCCCceEEEEeCEEEEeCCCCCCC
Confidence 00001111 11 11122222 2334455 8999844566554 55788888888 679999999999975543
No 146
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.68 E-value=1.1e-08 Score=107.08 Aligned_cols=140 Identities=17% Similarity=0.205 Sum_probs=76.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC---CCcEEEEcCCCCCCCCCcccchhH-h-hhhcCchhhhhhccCceEEEecCCcc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH---SVKVCCVDPSPLSTWPNNYGVWVD-E-FEDIGLVDCLDKTWPMTCVFINDHKT 159 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~---G~~V~viE~~~~~~~~~~~g~~~~-~-l~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (503)
+|||+|||||+||+++|..|++ . |++|+|||+.+..+...++|+... . +....+...+.. .....+.....
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~~~~G~~V~liE~~~~GG~~~~~g~~psk~l~~~a~~~~~~~~-~~~~g~~~~~~-- 77 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAAT-SHPETTQVTVIDCDGIGGAAVLDDCVPSKTFIASTGLRTELRR-APHLGFHIDFD-- 77 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HCTTTEEEEEEESSCTTHHHHHTSHHHHHHHHHHHHHHHHHTT-TTTTTBC------
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCCcCEEEEEeCCCcCCcccCcCccchHHHHHHHHHHHHHHH-HHhCCCccccC--
Confidence 4899999999999999999999 8 999999998751111011121110 0 000000000000 00000000000
Q ss_pred cccCCCccc-cCH-----HHHHHHHHHHHHhCCcEEEEeEEEEEEEe----CCEEEEEeCCCc--EEEeceEEecCCCCc
Q 010693 160 KYLDRPYGR-VSR-----NILKTKLLENCVSNGVKFHKAKVWHVNHQ----EFESSIVCDDGN--EIKASLIVDASGFAS 227 (503)
Q Consensus 160 ~~~~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~----~~~~~v~~~~g~--~i~a~~vI~A~G~~s 227 (503)
.....+.. +.+ ..+...+.+.+.+.|++++..++..++.+ ++.+.|...+|+ ++.+|.+|.|+|...
T Consensus 78 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~~~~~~~~~~~~V~~~~g~~~~~~~d~lviATGs~p 156 (499)
T 1xdi_A 78 -DAKISLPQIHARVKTLAAAQSADITAQLLSMGVQVIAGRGELIDSTPGLARHRIKATAADGSTSEHEADVVLVATGASP 156 (499)
T ss_dssp ---CBCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESEEEECCSSSCCSSEEEEEECTTSCEEEEEESEEEECCCEEE
T ss_pred -CCccCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEecCcccCCCCEEEEEeCCCcEEEEEeCEEEEcCCCCC
Confidence 00001111 111 12344456666778999994456665542 246777777776 799999999999765
Q ss_pred cc
Q 010693 228 SF 229 (503)
Q Consensus 228 ~v 229 (503)
..
T Consensus 157 ~~ 158 (499)
T 1xdi_A 157 RI 158 (499)
T ss_dssp CC
T ss_pred CC
Confidence 44
No 147
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.66 E-value=1.4e-07 Score=95.32 Aligned_cols=99 Identities=20% Similarity=0.270 Sum_probs=80.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-+++|||||+.|+-+|..|++ .|.+|+++|+.+....
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~~~----------------------------------------- 182 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSS-GGYQLDVVAPCEQVMP----------------------------------------- 182 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSSST-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh-CCCeEEEEecCcchhh-----------------------------------------
Confidence 3579999999999999999999 9999999997653110
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
......+.+.+.+.+++.|++++ +++|++++.+++.+.|.+.+|+++.||.||.|+|..+.
T Consensus 183 ---~~~~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~g~~i~~d~vv~a~G~~p~ 244 (384)
T 2v3a_A 183 ---GLLHPAAAKAVQAGLEGLGVRFHLGPVLASLKKAGEGLEAHLSDGEVIPCDLVVSAVGLRPR 244 (384)
T ss_dssp ---TTSCHHHHHHHHHHHHTTTCEEEESCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred ---cccCHHHHHHHHHHHHHcCCEEEeCCEEEEEEecCCEEEEEECCCCEEECCEEEECcCCCcC
Confidence 00112345667777778999999 89999999888888889999999999999999998764
No 148
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.66 E-value=4.5e-08 Score=101.08 Aligned_cols=110 Identities=20% Similarity=0.243 Sum_probs=68.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
.++||+|||||+||+++|..|++ . |++|+|||+.+..... .++ +.. +....
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~-~~~~~~V~vie~~~~~~~~-~~~----------~p~-----------~~~~~---- 54 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKR-LKPEWDVKVFEATEWVSHA-PCG----------IPY-----------VVEGL---- 54 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSSCCC---------------------------------------
T ss_pred CcCcEEEECCcHHHHHHHHHHHH-hCcCCCEEEEECCCccccC-CcC----------Ccc-----------ccCCC----
Confidence 35899999999999999999999 6 8999999987643210 000 000 00000
Q ss_pred cCCCccccCHHHHHHHHHHHH-HhCCcEEE-EeEEEEEEEeCCEEEEEeCCC-cEEEeceEEecCCCCccc
Q 010693 162 LDRPYGRVSRNILKTKLLENC-VSNGVKFH-KAKVWHVNHQEFESSIVCDDG-NEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~v~r~~l~~~L~~~~-~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g-~~i~a~~vI~A~G~~s~v 229 (503)
.+...+.....+.. .+.|++++ +++|+.++.+ ...|.+.+| .++.+|.||.|+|.....
T Consensus 55 -------~~~~~~~~~~~~~~~~~~gi~v~~~~~v~~i~~~--~~~v~~~~g~~~~~~d~lviAtG~~p~~ 116 (449)
T 3kd9_A 55 -------STPDKLMYYPPEVFIKKRGIDLHLNAEVIEVDTG--YVRVRENGGEKSYEWDYLVFANGASPQV 116 (449)
T ss_dssp ------------------CTHHHHTTCEEETTCEEEEECSS--EEEEECSSSEEEEECSEEEECCCEEECC
T ss_pred -------CCHHHhhhcCHHHHHHhcCcEEEecCEEEEEecC--CCEEEECCceEEEEcCEEEECCCCCCCC
Confidence 00011111111222 45799999 8899998643 466777777 379999999999975543
No 149
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.65 E-value=3.1e-08 Score=102.77 Aligned_cols=134 Identities=19% Similarity=0.221 Sum_probs=70.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHh-h-hhcCchhhhhhccCceEEEecCCcccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDE-F-EDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~-l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
.+|||+||||||+|+++|..|++ .|++|+|||+++..+...+.|+.... + ....+...+.. .....+....
T Consensus 3 ~~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~-~~~~g~~~~~----- 75 (463)
T 2r9z_A 3 QHFDLIAIGGGSGGLAVAEKAAA-FGKRVALIESKALGGTCVNVGCVPKKVMWYASHLAEAVRD-APGFGVQASG----- 75 (463)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHH-GGGGTBCCC------
T ss_pred ccCcEEEECCCHHHHHHHHHHHh-CCCcEEEEcCCCCCCcCcCcCchhHHHHHHHHHHHHHHhh-hhhcCcccCC-----
Confidence 36999999999999999999999 99999999986311100011111110 0 00000000100 0000000000
Q ss_pred cCCCccc-cCH-----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 162 LDRPYGR-VSR-----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
....+.. +.+ ..+...+.+.+.+.|++++..++..++ ...+. + +|+++.+|.||.|+|.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gv~~~~g~~~~i~--~~~v~--~-~g~~~~~d~lviAtGs~p~~ 144 (463)
T 2r9z_A 76 GTLDWPRLVAGRDRYIGAINSFWDGYVERLGITRVDGHARFVD--AHTIE--V-EGQRLSADHIVIATGGRPIV 144 (463)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCEEEEE--TTEEE--E-TTEEEEEEEEEECCCEEECC
T ss_pred CCcCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEeEEEEcc--CCEEE--E-CCEEEEcCEEEECCCCCCCC
Confidence 0001111 111 223334445556789999844454443 33443 3 67789999999999976543
No 150
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=98.65 E-value=1.4e-07 Score=97.31 Aligned_cols=38 Identities=26% Similarity=0.512 Sum_probs=34.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
.++||+|||||++||++|+.|++ .|++|+|+|+++..+
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~G 41 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRK-AGLSVAVIEARDRVG 41 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCCCC
Confidence 46899999999999999999999 999999999986654
No 151
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.65 E-value=2.5e-08 Score=102.95 Aligned_cols=111 Identities=14% Similarity=0.188 Sum_probs=71.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
+||+|||||+||+++|..|++ . |.+|+|||+.+...+ ..|+. .. .+.... .+. ..+.
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~-~~~g~~V~lie~~~~~~~-~~~~~--~~--------~~~~~~-------~~~--~~~~ 59 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLN-LHPDAEIQWYEKGDFISF-LSAGM--QL--------YLEGKV-------KDV--NSVR 59 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-HCTTSEEEEEESSSSSSB-CGGGH--HH--------HHTTSS-------CCG--GGSB
T ss_pred CeEEEECCCHHHHHHHHHHHH-hCcCCeEEEEECCCccCc-ccccc--hh--------hhcCcc-------CCH--HHhh
Confidence 489999999999999999999 7 999999998764321 11110 00 000000 000 0000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe-CCCc--EEEeceEEecCCCCccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC-DDGN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vI~A~G~~s~v 229 (503)
. .+.+.+.+.|++++ +++|+.++.+++.+.+.. .+|+ ++++|.+|.|+|.....
T Consensus 60 ~------------~~~~~~~~~gv~~~~~~~v~~i~~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~ 117 (447)
T 1nhp_A 60 Y------------MTGEKMESRGVNVFSNTEITAIQPKEHQVTVKDLVSGEERVENYDKLIISPGAVPFE 117 (447)
T ss_dssp S------------CCHHHHHHTTCEEEETEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECC
T ss_pred c------------CCHHHHHHCCCEEEECCEEEEEeCCCCEEEEEecCCCceEEEeCCEEEEcCCCCcCC
Confidence 0 01122335799997 899999987777777665 3465 48999999999976543
No 152
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=98.65 E-value=1.4e-07 Score=97.28 Aligned_cols=54 Identities=15% Similarity=0.229 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHhCCcEEE-EeEEEEEEE-eCCE-EEEEeCCCcEEEeceEEecCCCC
Q 010693 173 ILKTKLLENCVSNGVKFH-KAKVWHVNH-QEFE-SSIVCDDGNEIKASLIVDASGFA 226 (503)
Q Consensus 173 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~-~~~~-~~v~~~~g~~i~a~~vI~A~G~~ 226 (503)
.+.+.|.+.+++.|++++ +++|++|.. ++++ +.|++.+|++++||.||.|.|..
T Consensus 257 ~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v~gV~~~~G~~i~Ad~VI~a~~~~ 313 (475)
T 3p1w_A 257 GIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKVCGIKSSDGEIAYCDKVICDPSYV 313 (475)
T ss_dssp HHHHHHHHHHHHC--CEESSCCEEEEEECTTSCEEEEEETTSCEEEEEEEEECGGGC
T ss_pred HHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeEEEEEECCCcEEECCEEEECCCcc
Confidence 555677888888999999 999999998 5454 56888888899999999999876
No 153
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.63 E-value=3.4e-08 Score=99.18 Aligned_cols=106 Identities=19% Similarity=0.299 Sum_probs=67.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
-.||+||||||||+++|..|++ .| +|+|||+.+...+.+ .... ..+.. ......+..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~-~g-~V~lie~~~~~~~~~--~~l~---------~~~~g----------~~~~~~~~~ 64 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQ-TY-EVTVIDKEPVPYYSK--PMLS---------HYIAG----------FIPRNRLFP 64 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTT-TS-EEEEECSSSSCCCCS--TTHH---------HHHTT----------SSCGGGGCS
T ss_pred CCcEEEECCcHHHHHHHHHHhh-cC-CEEEEECCCCCcccc--chhH---------HHHhC----------CCCHHHhcc
Confidence 4699999999999999999999 99 999999876432210 1110 00100 000000000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
. ..+.+.+.|++++ +++|+.++.++.. |. .+|+++.+|.||.|+|....
T Consensus 65 ~------------~~~~~~~~~v~~~~g~~v~~id~~~~~--V~-~~g~~~~~d~lViATGs~p~ 114 (367)
T 1xhc_A 65 Y------------SLDWYRKRGIEIRLAEEAKLIDRGRKV--VI-TEKGEVPYDTLVLATGARAR 114 (367)
T ss_dssp S------------CHHHHHHHTEEEECSCCEEEEETTTTE--EE-ESSCEEECSEEEECCCEEEC
T ss_pred C------------CHHHHHhCCcEEEECCEEEEEECCCCE--EE-ECCcEEECCEEEECCCCCCC
Confidence 0 1112235689999 7889998865433 44 56788999999999997554
No 154
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.62 E-value=3.5e-08 Score=101.93 Aligned_cols=135 Identities=18% Similarity=0.160 Sum_probs=70.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhH-hh-hhcCchhhhhhccCceEEEecCCcccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVD-EF-EDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~-~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
.++||+||||||+|+++|..|++ .|++|+|||+++..+...+.|+... .+ ....+...+........+..... .
T Consensus 3 ~~~dvvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~~GG~~~~~gciP~k~l~~~a~~~~~~~~~~~~~g~~~~~~---~ 78 (450)
T 1ges_A 3 KHYDYIAIGGGSGGIASINRAAM-YGQKCALIEAKELGGTCVNVGCVPKKVMWHAAQIREAIHMYGPDYGFDTTIN---K 78 (450)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHT-TTCCEEEEESSCTTHHHHHHSHHHHHHHHHHHHHHHHHHTTGGGGTEEEEEE---E
T ss_pred ccCCEEEECCCHHHHHHHHHHHh-CCCeEEEEcCCCCCCcccccCccChHHHHHHHHHHHHHHHHHHhcCccCCCC---c
Confidence 36999999999999999999999 9999999998631110001111111 00 00000001110000000000000 0
Q ss_pred cCCCccc-cC-----HHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 162 LDRPYGR-VS-----RNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~-v~-----r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
. .+.. +. ...+...+.+.+.+.|++++..++..++ ...+. + +|+++.+|.+|.|+|.....
T Consensus 79 ~--~~~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~~i~--~~~v~--~-~g~~~~~d~lviAtGs~p~~ 145 (450)
T 1ges_A 79 F--NWETLIASRTAYIDRIHTSYENVLGKNNVDVIKGFARFVD--AKTLE--V-NGETITADHILIATGGRPSH 145 (450)
T ss_dssp E--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEESCCEEEE--TTEEE--E-TTEEEEEEEEEECCCEEECC
T ss_pred c--CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeEEEEec--CCEEE--E-CCEEEEeCEEEECCCCCCCC
Confidence 0 0100 11 1223334445556789999844454443 33443 3 67789999999999975543
No 155
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=98.62 E-value=3.7e-08 Score=103.71 Aligned_cols=137 Identities=16% Similarity=0.159 Sum_probs=73.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCC--CCcc-------cchhH-hh-hhcCchhhhhhccCceEEE
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTW--PNNY-------GVWVD-EF-EDIGLVDCLDKTWPMTCVF 153 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~--~~~~-------g~~~~-~l-~~~~~~~~~~~~~~~~~~~ 153 (503)
+|||+||||||+|+.+|..+++ .|.+|+|||+...... ...+ |+-.. .| ....+.+.+...-....+.
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~-~G~kValIE~~~~~~~~~k~~lGGtCln~GCIPsK~L~~aa~~~~~~~~~~~~~Gi~ 120 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAA-HGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWK 120 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHT-TTCCEEEECCCCCCTTCCCCCSSHHHHHHSHHHHHHHHHHHHHHHHHHHTGGGGTEE
T ss_pred CCCEEEECCCHHHHHHHHHHHH-CCCeEEEEeccccccccccCCCCCcccccchHHHHHHHHHHHHHHHHHhhhHhcCcc
Confidence 5999999999999999999999 9999999997653221 1112 22111 11 1111111111100111111
Q ss_pred ecCCcccccCCCccc-cCH-----HHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCC----CcEEEeceEEecC
Q 010693 154 INDHKTKYLDRPYGR-VSR-----NILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDD----GNEIKASLIVDAS 223 (503)
Q Consensus 154 ~~~~~~~~~~~~~~~-v~r-----~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~----g~~i~a~~vI~A~ 223 (503)
+... .. .+.. +.+ ..+.......++++||+++.....-+ +...+.|...+ +++++++.+|.|+
T Consensus 121 ~~~~---~~--d~~~~~~~~~~~v~~l~~~~~~~l~~~~V~~i~G~a~f~--~~~~v~V~~~~~~~~~~~i~a~~iiIAT 193 (542)
T 4b1b_A 121 FDNL---KH--DWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLK--DKNTVSYYLKGDLSKEETVTGKYILIAT 193 (542)
T ss_dssp EEEE---EE--CHHHHHHHHHHHHHHHHHHHHHHHHHTTCEEECEEEEEE--ETTEEEEEEC--CCCEEEEEEEEEEECC
T ss_pred cCcc---cc--cHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEeeeEEEc--CCCcceEeecccCCceEEEeeeeEEecc
Confidence 1110 00 1111 111 22333444556678999983332222 24456665442 3479999999999
Q ss_pred CCCccc
Q 010693 224 GFASSF 229 (503)
Q Consensus 224 G~~s~v 229 (503)
|..+.+
T Consensus 194 Gs~P~~ 199 (542)
T 4b1b_A 194 GCRPHI 199 (542)
T ss_dssp CEEECC
T ss_pred CCCCCC
Confidence 987654
No 156
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.60 E-value=5.7e-08 Score=98.88 Aligned_cols=108 Identities=12% Similarity=0.214 Sum_probs=70.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.||+|||||+||+++|..|++ .|+ +|+|||+.+...+.+. .+.. ..+. .... .
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~-~g~~~~V~lie~~~~~~y~~~------~l~~----~~l~-----------~~~~---~ 56 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQ-AKYPGRIALINDEKHLPYQRP------PLSK----AYLK-----------SGGD---P 56 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCSCEEEECCSSSSSBCSG------GGGT----GGGG-----------SCCC---T
T ss_pred CCEEEEcChHHHHHHHHHHHh-hCcCCCEEEEeCCCCCCCCCc------cCCH----HHHC-----------CCCC---H
Confidence 589999999999999999999 998 8999998764332111 0000 0000 0000 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
..+ ... ..+...+.|++++.++|+.++.++. .|.+.+|+++.+|.+|.|+|....
T Consensus 57 ~~~-~~~-------~~~~~~~~~i~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p~ 111 (404)
T 3fg2_P 57 NSL-MFR-------PEKFFQDQAIELISDRMVSIDREGR--KLLLASGTAIEYGHLVLATGARNR 111 (404)
T ss_dssp TSS-BSS-------CHHHHHHTTEEEECCCEEEEETTTT--EEEESSSCEEECSEEEECCCEEEC
T ss_pred HHc-cCC-------CHHHHHhCCCEEEEEEEEEEECCCC--EEEECCCCEEECCEEEEeeCCCcc
Confidence 001 011 1122335789988788988886655 467788889999999999997543
No 157
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.58 E-value=3.7e-07 Score=94.62 Aligned_cols=98 Identities=16% Similarity=0.198 Sum_probs=78.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-+|+|||||++|+-+|..|++ .|.+|+|+|+.+.... .
T Consensus 170 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~-~---------------------------------------- 207 (464)
T 2eq6_A 170 KRLLVIGGGAVGLELGQVYRR-LGAEVTLIEYMPEILP-Q---------------------------------------- 207 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSST-T----------------------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCeEEEEEcCCcccc-c----------------------------------------
Confidence 579999999999999999999 9999999998653210 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC-C--Cc--EEEeceEEecCCCCccc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD-D--GN--EIKASLIVDASGFASSF 229 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~--g~--~i~a~~vI~A~G~~s~v 229 (503)
....+.+.+.+.+++.|++++ +++|++++.+++.+.|.+. + |+ ++.+|.||.|+|..+..
T Consensus 208 ----~~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vv~a~G~~p~~ 273 (464)
T 2eq6_A 208 ----GDPETAALLRRALEKEGIRVRTKTKAVGYEKKKDGLHVRLEPAEGGEGEEVVVDKVLVAVGRKPRT 273 (464)
T ss_dssp ----SCHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTCCSCEEEEESEEEECSCEEESC
T ss_pred ----cCHHHHHHHHHHHHhcCCEEEcCCEEEEEEEeCCEEEEEEeecCCCceeEEEcCEEEECCCcccCC
Confidence 012345566677778999999 9999999988777777776 6 76 89999999999987643
No 158
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=98.58 E-value=2.3e-07 Score=95.30 Aligned_cols=56 Identities=9% Similarity=0.068 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 173 ILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 173 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.+.+.|.+.+++.|++++ +++|++|..+++++.++..+|++++||.||.|.|..+.
T Consensus 235 ~l~~~l~~~~~~~G~~i~~~~~V~~I~~~~~~v~~v~~~g~~~~ad~VV~a~~~~~~ 291 (433)
T 1d5t_A 235 ELPQGFARLSAIYGGTYMLNKPVDDIIMENGKVVGVKSEGEVARCKQLICDPSYVPD 291 (433)
T ss_dssp HHHHHHHHHHHHHTCCCBCSCCCCEEEEETTEEEEEEETTEEEECSEEEECGGGCGG
T ss_pred HHHHHHHHHHHHcCCEEECCCEEEEEEEeCCEEEEEEECCeEEECCEEEECCCCCcc
Confidence 566677777777899999 99999999888877655567888999999999998764
No 159
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=98.58 E-value=2.9e-07 Score=95.10 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=79.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||++|+-+|..|++ .|.+|+|+|+.+.... ..
T Consensus 168 ~~vvIiGgG~~g~e~A~~l~~-~g~~V~lv~~~~~~l~------------~~---------------------------- 206 (455)
T 2yqu_A 168 KRLIVVGGGVIGLELGVVWHR-LGAEVIVLEYMDRILP------------TM---------------------------- 206 (455)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSCT------------TS----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCEEEEEecCCcccc------------cc----------------------------
Confidence 579999999999999999999 9999999998653210 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.+++.+.+.+.+|+++.+|.||.|+|..+.
T Consensus 207 -----~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~~D~vv~A~G~~p~ 265 (455)
T 2yqu_A 207 -----DLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPY 265 (455)
T ss_dssp -----CHHHHHHHHHHHHHHTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEEC
T ss_pred -----CHHHHHHHHHHHHHCCCEEEECCEEEEEEEeCCEEEEEECCCeEEEcCEEEECcCCCcC
Confidence 12344556666777899999 99999999888888888888889999999999998764
No 160
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.57 E-value=3.7e-08 Score=102.96 Aligned_cols=34 Identities=35% Similarity=0.518 Sum_probs=32.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
+|||+||||||||+++|..|++ .|++|+|||+++
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~-~G~~V~liE~~~ 41 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKK-HTDKVVLIEGGA 41 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHT-TCSCEEEEESSC
T ss_pred CCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCC
Confidence 5999999999999999999999 999999999864
No 161
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=98.57 E-value=4.8e-08 Score=100.27 Aligned_cols=109 Identities=17% Similarity=0.273 Sum_probs=70.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHc-cCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSS-RHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~-~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
..||+|||||+||+++|..|++ ..|++|+|||+.+...+. ..+... ..+. . ... .+.
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~~~~~~~~---~~~~~~--~~g~--------~------~~~---~~~ 59 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDLKITLISDRPYFGFT---PAFPHL--AMGW--------R------KFE---DIS 59 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTCEEEEECSSSEEECG---GGHHHH--HHTC--------S------CGG---GSE
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCCeEEEECCCCCCCcC---CCcchh--ccCc--------c------CHH---HHH
Confidence 3699999999999999999998 247999999987543221 000000 0000 0 000 000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
.. +.+.+.+.|++++..+|+.++.++. .|.+++|+++.+|.||.|+|.....
T Consensus 60 ~~------------~~~~~~~~gv~~~~~~v~~id~~~~--~v~~~~g~~i~~d~liiAtG~~~~~ 111 (430)
T 3h28_A 60 VP------------LAPLLPKFNIEFINEKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKLVF 111 (430)
T ss_dssp EE------------STTTGGGGTEEEECSCEEEEETTTT--EEEETTCCEEECSEEEECCCCEEEC
T ss_pred HH------------HHHHHHhcCCEEEEEEEEEEECCCC--EEEECCCcEEECCEEEEcCCccccc
Confidence 00 1112234689999668999886655 5677888889999999999987543
No 162
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.57 E-value=2.1e-07 Score=94.92 Aligned_cols=108 Identities=19% Similarity=0.274 Sum_probs=71.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCc--EEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVK--VCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~--V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.||+|||||+||+++|..|++ .|++ |+|||+.+...+.+. . ... ..+... .....+
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~-~g~~~~V~li~~~~~~~y~~~-~-l~~--------~~~~g~----------~~~~~~- 60 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRA-EGFEGRISLIGDEPHLPYDRP-S-LSK--------AVLDGS----------LERPPI- 60 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCSEEEEEECSSSSSBCSG-G-GGT--------HHHHTS----------SSSCCB-
T ss_pred CCEEEEcccHHHHHHHHHHHc-cCcCCeEEEEECCCCCCcCCc-c-ccH--------HHhCCC----------CCHHHh-
Confidence 489999999999999999999 9987 999998765332111 0 000 000000 000000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
+.. .+...+.|++++ +++|+.++.+.. .|.+.+|+++.+|.||.|+|.....
T Consensus 61 -----~~~-------~~~~~~~~i~~~~~~~v~~id~~~~--~v~~~~g~~~~~d~lvlAtG~~p~~ 113 (410)
T 3ef6_A 61 -----LAE-------ADWYGEARIDMLTGPEVTALDVQTR--TISLDDGTTLSADAIVIATGSRART 113 (410)
T ss_dssp -----SSC-------TTHHHHTTCEEEESCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred -----cCC-------HHHHHHCCCEEEeCCEEEEEECCCC--EEEECCCCEEECCEEEEccCCcccC
Confidence 000 011235799999 789999986654 5677888899999999999976543
No 163
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=98.56 E-value=2.8e-07 Score=100.90 Aligned_cols=41 Identities=17% Similarity=0.257 Sum_probs=37.4
Q ss_pred CCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCC
Q 010693 185 NGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGF 225 (503)
Q Consensus 185 ~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~ 225 (503)
.|++++ +++|++|..+++++.|++.+|++++||.||.|...
T Consensus 542 ~gl~I~l~t~V~~I~~~~~~v~V~~~~G~~i~Ad~VIvA~P~ 583 (776)
T 4gut_A 542 EGLDIQLKSPVQCIDYSGDEVQVTTTDGTGYSAQKVLVTVPL 583 (776)
T ss_dssp TTSCEESSCCEEEEECSSSSEEEEETTCCEEEESEEEECCCH
T ss_pred hCCcEEcCCeeEEEEEcCCEEEEEECCCcEEEcCEEEECCCH
Confidence 478999 99999999988889999999989999999999964
No 164
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.56 E-value=1.6e-07 Score=95.75 Aligned_cols=107 Identities=14% Similarity=0.205 Sum_probs=71.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
..+||+|||||+||+++|..|++ .|. +|+|||+.+...+.+ +. ... ..+.... .. .
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~~~V~lie~~~~~~~~~-~~-~~~--------~~~~~~~-------~~----~ 63 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQ-AGYQGLITVVGDEAERPYDR-PP-LSK--------DFMAHGD-------AE----K 63 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHH-HTCCSCEEEEESSCSCCBCS-GG-GGT--------HHHHHCC-------GG----G
T ss_pred CCCcEEEECChHHHHHHHHHHHc-cCCCCeEEEEECCCCCcccC-CC-CCH--------HHhCCCc-------hh----h
Confidence 46899999999999999999999 898 599999876432211 00 000 0010000 00 0
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 162 LDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 162 ~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
. .+. .+.+.|++++ +++|+.++.++. .|.+.+|+++.+|.||.|+|..+..
T Consensus 64 ----~-~~~----------~~~~~~v~~~~~~~v~~i~~~~~--~v~~~~g~~~~~d~lviAtG~~~~~ 115 (408)
T 2gqw_A 64 ----I-RLD----------CKRAPEVEWLLGVTAQSFDPQAH--TVALSDGRTLPYGTLVLATGAAPRA 115 (408)
T ss_dssp ----S-BCC----------CTTSCSCEEEETCCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECC
T ss_pred ----h-hHH----------HHHHCCCEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCCC
Confidence 0 111 2235789998 778999986544 4666788899999999999986654
No 165
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.56 E-value=1.3e-06 Score=92.85 Aligned_cols=96 Identities=16% Similarity=0.203 Sum_probs=76.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+.... .
T Consensus 152 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------- 189 (565)
T 3ntd_A 152 EHATVVGGGFIGLEMMESLHH-LGIKTTLLELADQVMT------------P----------------------------- 189 (565)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSSCT------------T-----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCcEEEEEcCCccch------------h-----------------------------
Confidence 379999999999999999999 9999999997542110 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEE-------------------eCCEEEEEeCCCcEEEeceEEecCCC
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNH-------------------QEFESSIVCDDGNEIKASLIVDASGF 225 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~-------------------~~~~~~v~~~~g~~i~a~~vI~A~G~ 225 (503)
. ...+.+.+.+.+++.|++++ +++|++++. +++.+.+.+.+|+++.||.||.|+|.
T Consensus 190 ---~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~~i~~D~vi~a~G~ 265 (565)
T 3ntd_A 190 ---V-DREMAGFAHQAIRDQGVDLRLGTALSEVSYQVQTHVASDAAGEDTAHQHIKGHLSLTLSNGELLETDLLIMAIGV 265 (565)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEEETCCEEEEEEECCCCCCCGGGTCCCTTCCTTCEEEEEETTSCEEEESEEEECSCE
T ss_pred ---c-CHHHHHHHHHHHHHCCCEEEeCCeEEEEeccccccccccccccccccccCCCcEEEEEcCCCEEEcCEEEECcCC
Confidence 0 11234556666778999999 899999987 35677888888889999999999987
Q ss_pred Cc
Q 010693 226 AS 227 (503)
Q Consensus 226 ~s 227 (503)
.+
T Consensus 266 ~p 267 (565)
T 3ntd_A 266 RP 267 (565)
T ss_dssp EE
T ss_pred cc
Confidence 54
No 166
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=98.56 E-value=5e-08 Score=103.78 Aligned_cols=113 Identities=12% Similarity=0.129 Sum_probs=72.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.||+||||||||+++|..|++ . |++|+|||+.+...+.. ++. .. .+. .... . .
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~-~~~~~~V~lie~~~~~~~~~-~~l--~~--------~~~-----------~~~~-~-~ 56 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARR-LSETAEIIMFERGEYVSFAN-CGL--PY--------HIS-----------GEIA-Q-R 56 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHH-HCSSSEEEEECSSSCSSBCG-GGH--HH--------HHT-----------SSSC-C-G
T ss_pred CcEEEECCCHHHHHHHHHHHh-hCcCCCEEEEECCCCccccc-cCc--hH--------Hhc-----------CCcC-C-h
Confidence 589999999999999999999 7 89999999876543211 111 00 000 0000 0 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe-CCCc--EEEeceEEecCCCCcccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC-DDGN--EIKASLIVDASGFASSFV 230 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vI~A~G~~s~vr 230 (503)
... ... .+...+...|++++ +++|++++.++..+.+.. .+|. ++.+|.||.|+|......
T Consensus 57 ~~~-~~~------~~~~~~~~~~i~~~~~~~V~~id~~~~~v~~~~~~~g~~~~~~~d~lviAtG~~p~~p 120 (565)
T 3ntd_A 57 SAL-VLQ------TPESFKARFNVEVRVKHEVVAIDRAAKLVTVRRLLDGSEYQESYDTLLLSPGAAPIVP 120 (565)
T ss_dssp GGG-BCC------CHHHHHHHHCCEEETTEEEEEEETTTTEEEEEETTTCCEEEEECSEEEECCCEEECCC
T ss_pred HHh-hcc------CHHHHHHhcCcEEEECCEEEEEECCCCEEEEEecCCCCeEEEECCEEEECCCCCCCCC
Confidence 000 011 11111223589998 999999998887777765 3343 799999999999865443
No 167
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=98.55 E-value=6.3e-08 Score=100.42 Aligned_cols=35 Identities=37% Similarity=0.645 Sum_probs=32.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.++||+||||||||+++|..|++ .|++|+|||+.+
T Consensus 5 ~~~dvvIIG~G~aG~~aA~~l~~-~g~~V~lie~~~ 39 (464)
T 2eq6_A 5 KTYDLIVIGTGPGGYHAAIRAAQ-LGLKVLAVEAGE 39 (464)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC
T ss_pred ccCCEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCC
Confidence 36999999999999999999999 999999999865
No 168
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=98.55 E-value=9.7e-08 Score=97.28 Aligned_cols=108 Identities=14% Similarity=0.127 Sum_probs=68.5
Q ss_pred CcEEEECCCHHHHHHHHHHHc--cCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSS--RHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~--~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.||+|||||+||+++|..|++ ..|++|+|||+++...+.. .+ . + .... . ...
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~~~~~~~~~---~~---------~------~------~~~~-~-~~~ 55 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINKSRFSYFRP---AL---------P------H------VAIG-V-RDV 55 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEESSSEEEECC---SS---------C------C------CCSS-C-CCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeCCCCceecc---ch---------h------h------cccC-C-cCH
Confidence 489999999999999999986 2589999999875211000 00 0 0 0000 0 000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCc----EEEeceEEecCCCCccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGN----EIKASLIVDASGFASSF 229 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~----~i~a~~vI~A~G~~s~v 229 (503)
..+ ...+.+.+.+.|++++..+|+.++.++..+.+ .+|+ ++.+|.||.|+|.....
T Consensus 56 ~~~--------~~~~~~~~~~~gv~~~~~~v~~i~~~~~~V~~--~~g~~~~~~~~~d~lViAtG~~~~~ 115 (409)
T 3h8l_A 56 DEL--------KVDLSEALPEKGIQFQEGTVEKIDAKSSMVYY--TKPDGSMAEEEYDYVIVGIGAHLAT 115 (409)
T ss_dssp CCE--------EEEHHHHTGGGTCEEEECEEEEEETTTTEEEE--ECTTSCEEEEECSEEEECCCCEECG
T ss_pred HHH--------HHHHHHHHhhCCeEEEEeeEEEEeCCCCEEEE--ccCCcccceeeCCEEEECCCCCcCc
Confidence 011 12233344467999995599999877665444 4443 49999999999986543
No 169
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.55 E-value=1.3e-07 Score=98.94 Aligned_cols=112 Identities=20% Similarity=0.161 Sum_probs=75.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
..+||+|||||+||+++|+.|++ . ++|+|||+.+..+. .+... . . . . .. +
T Consensus 107 ~~~dVvIIGgG~aGl~aA~~L~~-~-~~V~vie~~~~~GG-----~~~~~----~------~-----~-~-~g-----~- 156 (493)
T 1y56_A 107 VVVDVAIIGGGPAGIGAALELQQ-Y-LTVALIEERGWLGG-----DMWLK----G------I-----K-Q-EG-----F- 156 (493)
T ss_dssp EEESCCEECCSHHHHHHHHHHTT-T-CCEEEECTTSSSSC-----SGGGT----C------S-----E-E-TT-----T-
T ss_pred ccCCEEEECccHHHHHHHHHHHh-c-CCEEEEeCCCCCCC-----eeecc----c------c-----c-c-CC-----C-
Confidence 46899999999999999999999 8 99999998764321 11100 0 0 0 0 00 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe-CCCc--EEEeceEEecCCCCcccc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC-DDGN--EIKASLIVDASGFASSFV 230 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~-~~g~--~i~a~~vI~A~G~~s~vr 230 (503)
+. ....+...+.+.+ ..|++++ +++|.++..++..+.+.. ++++ ++.+|.+|.|+|......
T Consensus 157 -~~---~~~~~~~~l~~~l-~~~v~~~~~~~v~~i~~~~~~~~~~~~~~~~~~~~~~d~lvlAtGa~~~~~ 222 (493)
T 1y56_A 157 -NK---DSRKVVEELVGKL-NENTKIYLETSALGVFDKGEYFLVPVVRGDKLIEILAKRVVLATGAIDSTM 222 (493)
T ss_dssp -TE---EHHHHHHHHHHTC-CTTEEEETTEEECCCEECSSSEEEEEEETTEEEEEEESCEEECCCEEECCC
T ss_pred -CC---CHHHHHHHHHHHH-hcCCEEEcCCEEEEEEcCCcEEEEEEecCCeEEEEECCEEEECCCCCccCC
Confidence 00 2233444444444 6789998 899999988776655544 4454 699999999999866543
No 170
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.53 E-value=6.3e-08 Score=101.41 Aligned_cols=34 Identities=38% Similarity=0.674 Sum_probs=32.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
+|||+||||||||+++|..|++ .|++|+|||+++
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~-~g~~V~liE~~~ 35 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAAR-HNAKVALVEKSR 35 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSS
T ss_pred ccCEEEECCCHHHHHHHHHHHH-CCCcEEEEeCCC
Confidence 5899999999999999999999 999999999864
No 171
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=98.52 E-value=2.4e-07 Score=99.23 Aligned_cols=35 Identities=29% Similarity=0.553 Sum_probs=32.5
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
...|||+||||||||+++|..|++ .|++|+|||+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~-~g~~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAK-YGAKTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHH-TTCCEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHh-CCCeEEEEecc
Confidence 456999999999999999999999 99999999974
No 172
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.52 E-value=1.4e-07 Score=98.47 Aligned_cols=131 Identities=21% Similarity=0.235 Sum_probs=75.6
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchhHhh-hhcC--chhhh-hhccCceEEEec
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWVDEF-EDIG--LVDCL-DKTWPMTCVFIN 155 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~~~l-~~~~--~~~~~-~~~~~~~~~~~~ 155 (503)
.+..+||+|||||+||+++|..|++ . |.+|+|||+.+...+.+. .....+ .... ..... ...|......+
T Consensus 8 ~~~~~~vvIIGgG~AGl~aA~~L~~-~~~g~~V~lie~~~~~~y~r~--~lsk~l~~~~~~~~~~~~~~~~~~~~~~~~- 83 (493)
T 1m6i_A 8 APSHVPFLLIGGGTAAFAAARSIRA-RDPGARVLIVSEDPELPYMRP--PLSKELWFSDDPNVTKTLRFKQWNGKERSI- 83 (493)
T ss_dssp CCSEEEEEEESCSHHHHHHHHHHHH-HSTTCEEEEEESSSSCCBCSG--GGGTGGGCC--CTHHHHCEEECTTSCEEES-
T ss_pred CCCcCCEEEECChHHHHHHHHHHHh-cCCCCeEEEEeCCCCCCCCCC--CCCHHhhcCCccchhhcccccccccccccc-
Confidence 4457999999999999999999887 5 899999998765433221 000000 0000 00000 00111111000
Q ss_pred CCcccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 156 DHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 156 ~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
.+.....+.+...+. .+.+.|++++ +++|+.++.++. .|.+.+|+++.+|.||.|+|....
T Consensus 84 -----~~~~~~~~~~~~~l~-----~~~~~gv~~~~g~~v~~id~~~~--~V~~~~g~~i~yd~lviATGs~p~ 145 (493)
T 1m6i_A 84 -----YFQPPSFYVSAQDLP-----HIENGGVAVLTGKKVVQLDVRDN--MVKLNDGSQITYEKCLIATGGTPR 145 (493)
T ss_dssp -----BSSCGGGSBCTTTTT-----TSTTCEEEEEETCCEEEEEGGGT--EEEETTSCEEEEEEEEECCCEEEC
T ss_pred -----cccchHhhcchhhhh-----hhhcCCeEEEcCCEEEEEECCCC--EEEECCCCEEECCEEEECCCCCCC
Confidence 011111112111111 1234689999 789999987654 466788889999999999997654
No 173
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.52 E-value=2.6e-07 Score=97.22 Aligned_cols=133 Identities=15% Similarity=0.113 Sum_probs=73.9
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCC-CcccchhH-hh-hhcCchhhhhhccCceEEEecCCc
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWP-NNYGVWVD-EF-EDIGLVDCLDKTWPMTCVFINDHK 158 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~-~~~g~~~~-~l-~~~~~~~~~~~~~~~~~~~~~~~~ 158 (503)
...++||+|||||++|+++|..|++ .|++|+|||+++..+.. .+.|+... .+ ........+.. .....+ +..
T Consensus 40 ~~~~~dVvIIGgG~aGl~aA~~l~~-~G~~V~liE~~~~~GG~~~~~g~~p~k~l~~~~~~~~~~~~-~~~~g~-~~~-- 114 (523)
T 1mo9_A 40 DPREYDAIFIGGGAAGRFGSAYLRA-MGGRQLIVDRWPFLGGSCPHNACVPHHLFSDCAAELMLART-FSGQYW-FPD-- 114 (523)
T ss_dssp CCSCBSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSSSSSCHHHHHSHHHHHHHHHHHHHHHHHHH-TTTSTT-CCC--
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeCCCCCCCcccccCcCchHHHHHHHHHHHHHhh-hhhcCc-HHH--
Confidence 3456999999999999999999999 99999999987532210 01111100 00 00000000000 000000 000
Q ss_pred ccccCCCccccCHHHHHHHHH-------HHH-----HhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCC
Q 010693 159 TKYLDRPYGRVSRNILKTKLL-------ENC-----VSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGF 225 (503)
Q Consensus 159 ~~~~~~~~~~v~r~~l~~~L~-------~~~-----~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~ 225 (503)
... . .+....+...+. +.+ .+.|++++ ..+++.++. .. |.+. |.++.+|.||.|+|.
T Consensus 115 --~~~-~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gv~~~~~~~v~~i~~--~~--v~~~-g~~~~~d~lViATGs 184 (523)
T 1mo9_A 115 --MTE-K--VVGIKEVVDLFRAGRNGPHGIMNFQSKEQLNLEYILNCPAKVIDN--HT--VEAA-GKVFKAKNLILAVGA 184 (523)
T ss_dssp --CTT-C--CCCHHHHHHHHHHHTHHHHHHHHHHHHHTSCCCEEESSCCEEEET--TE--EEET-TEEEEBSCEEECCCE
T ss_pred --HHh-h--hhhHHHHHHHHHhhhhhhhhhhhhcccccCCcEEEEeeEEEEeeC--CE--EEEC-CEEEEeCEEEECCCC
Confidence 000 0 122334444332 333 56899998 888877653 33 3444 678999999999997
Q ss_pred Cccc
Q 010693 226 ASSF 229 (503)
Q Consensus 226 ~s~v 229 (503)
...+
T Consensus 185 ~p~~ 188 (523)
T 1mo9_A 185 GPGT 188 (523)
T ss_dssp ECCC
T ss_pred CCCC
Confidence 6543
No 174
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=98.51 E-value=1.1e-07 Score=95.95 Aligned_cols=108 Identities=17% Similarity=0.139 Sum_probs=68.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCC--CcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHS--VKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G--~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
++||+|||||+||+++|..|++ .| .+|+|+|+++.. .+... .+...+ ...
T Consensus 4 ~~dvvIIG~G~aGl~aA~~l~~-~g~~~~V~lie~~~g~-------~~~~~----~l~~~~-----------~~~----- 55 (384)
T 2v3a_A 4 RAPLVIIGTGLAGYNLAREWRK-LDGETPLLMITADDGR-------SYSKP----MLSTGF-----------SKN----- 55 (384)
T ss_dssp CCCEEEECCSHHHHHHHHHHHT-TCSSSCEEEECSSCCC-------EECGG----GGGGTT-----------TTT-----
T ss_pred CCcEEEECChHHHHHHHHHHHh-hCCCCCEEEEECCCCC-------ccCcc----cccHHH-----------hCC-----
Confidence 5899999999999999999999 89 569999976411 11000 000000 000
Q ss_pred CCCccccCHHHHHH-HHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 163 DRPYGRVSRNILKT-KLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 163 ~~~~~~v~r~~l~~-~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
.....+.. .+.+.+.+.|++++ +++|+.++.++.. |.+.+ .++.+|.+|.|+|..+..
T Consensus 56 ------~~~~~~~~~~~~~~~~~~~v~~~~~~~v~~i~~~~~~--v~~~~-~~~~~d~lviAtG~~p~~ 115 (384)
T 2v3a_A 56 ------KDADGLAMAEPGAMAEQLNARILTHTRVTGIDPGHQR--IWIGE-EEVRYRDLVLAWGAEPIR 115 (384)
T ss_dssp ------CCHHHHEEECHHHHHHHTTCEEECSCCCCEEEGGGTE--EEETT-EEEECSEEEECCCEEECC
T ss_pred ------CCHHHhhccCHHHHHHhCCcEEEeCCEEEEEECCCCE--EEECC-cEEECCEEEEeCCCCcCC
Confidence 01111111 12233446799999 8889988865544 44444 479999999999986654
No 175
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=98.47 E-value=4.5e-08 Score=100.51 Aligned_cols=104 Identities=16% Similarity=0.260 Sum_probs=67.8
Q ss_pred cEEEECCCHHHHHHHHHHHccCC--CcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHS--VKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G--~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.|||||||+||+++|..|++ .+ ++|+|||+++...+ ...+... ..|.. . ...+..
T Consensus 4 ~VvIIGgG~aGl~aA~~L~~-~~~~~~VtlI~~~~~~~~---~p~l~~v--~~g~~-------~----------~~~i~~ 60 (430)
T 3hyw_A 4 HVVVIGGGVGGIATAYNLRN-LMPDLKITLISDRPYFGF---TPAFPHL--AMGWR-------K----------FEDISV 60 (430)
T ss_dssp EEEEECSSHHHHHHHHHHHH-HCTTCEEEEECSSSEEEC---GGGHHHH--HHTCS-------C----------GGGSEE
T ss_pred cEEEECCCHHHHHHHHHHhc-cCcCCeEEEEcCCCCCcc---CccHHHH--hcCCC-------C----------HHHhhh
Confidence 59999999999999999998 55 89999998653211 0111000 00100 0 000000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
++. +.+.+.|++++..+|++|+.++. +|++++|+++.+|++|.|+|...
T Consensus 61 ~~~------------~~~~~~gv~~i~~~v~~Id~~~~--~V~~~~g~~i~YD~LViAtG~~~ 109 (430)
T 3hyw_A 61 PLA------------PLLPKFNIEFINEKAESIDPDAN--TVTTQSGKKIEYDYLVIATGPKL 109 (430)
T ss_dssp EST------------TTGGGGTEEEECSCEEEEETTTT--EEEETTCCEEECSEEEECCCCEE
T ss_pred cHH------------HHHHHCCcEEEEeEEEEEECCCC--EEEECCCCEEECCEEEEeCCCCc
Confidence 110 11234689999778999987665 46788999999999999999754
No 176
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=98.47 E-value=4.6e-07 Score=91.94 Aligned_cols=105 Identities=15% Similarity=0.236 Sum_probs=68.9
Q ss_pred cEEEECCCHHHHHHHHHHHccCC--CcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHS--VKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G--~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.|||||||+||+++|..|++ .| .+|+|||+++... .++.+...+. +.. ....+..
T Consensus 4 kVvIIG~G~AG~~aA~~L~~-~~~~~~Vtlie~~~~~~---~~p~~~~v~~--g~~-----------------~~~~~~~ 60 (401)
T 3vrd_B 4 KVVVVGGGTGGATAAKYIKL-ADPSIEVTLIEPNETYY---TCYMSNEVIG--GDR-----------------ELASLRV 60 (401)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSCSSEE---CSTTHHHHHH--TSS-----------------CGGGGEE
T ss_pred EEEEECCcHHHHHHHHHHHh-cCcCCeEEEEeCCCCCC---CccCHHHHhc--CCC-----------------CHHHHhh
Confidence 59999999999999999988 55 6899999865311 1112211100 000 0000001
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
++ + .+...|++++..+|+.++.++. .|.+.+|.++.+|.+|.|+|.....
T Consensus 61 ~~-----~--------~~~~~gv~~i~~~v~~id~~~~--~v~~~~g~~i~yd~LviAtG~~~~~ 110 (401)
T 3vrd_B 61 GY-----D--------GLRAHGIQVVHDSALGIDPDKK--LVKTAGGAEFAYDRCVVAPGIDLLY 110 (401)
T ss_dssp CS-----H--------HHHHTTCEEECSCEEEEETTTT--EEEETTSCEEECSEEEECCCEEECG
T ss_pred CH-----H--------HHHHCCCEEEEeEEEEEEccCc--EEEecccceeecceeeeccCCcccc
Confidence 11 1 1234799999778999987665 4677889999999999999976543
No 177
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=98.46 E-value=6.9e-07 Score=92.19 Aligned_cols=97 Identities=16% Similarity=0.194 Sum_probs=77.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+|+|+.+.... .+
T Consensus 168 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~~---------------------------- 206 (450)
T 1ges_A 168 ERVAVVGAGYIGVELGGVING-LGAKTHLFEMFDAPLP------------SF---------------------------- 206 (450)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSST------------TS----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCEEEEEEeCCchhh------------hh----------------------------
Confidence 479999999999999999999 9999999997643110 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
+ ..+.+.+.+.+++.|++++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 207 ----~-~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~i~~D~vv~a~G~~p~ 266 (450)
T 1ges_A 207 ----D-PMISETLVEVMNAEGPQLHTNAIPKAVVKNTDGSLTLELEDGRSETVDCLIWAIGREPA 266 (450)
T ss_dssp ----C-HHHHHHHHHHHHHHSCEEECSCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred ----h-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCcEEEEEECCCcEEEcCEEEECCCCCcC
Confidence 0 1144556666777899999 999999987654 47888889989999999999998664
No 178
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.45 E-value=3.4e-07 Score=94.71 Aligned_cols=34 Identities=26% Similarity=0.451 Sum_probs=32.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
.+|||+||||||||+++|..|++ .|++|+|||++
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~-~g~~V~lie~~ 37 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQ-LGIPTVLVEGQ 37 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHH-HTCCEEEECSS
T ss_pred CcCCEEEECCCHHHHHHHHHHHH-CCCEEEEEccC
Confidence 46999999999999999999999 99999999983
No 179
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=98.45 E-value=4.9e-07 Score=98.39 Aligned_cols=39 Identities=21% Similarity=0.374 Sum_probs=35.2
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
....+||+||||||||+++|+.|++ .|++|+|||+.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~-~G~~V~liE~~~~~ 426 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGV-RGYDVVLAEAGRDL 426 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSS
T ss_pred ccccceEEEECCCHHHHHHHHHHHH-CCCeEEEEecCCCC
Confidence 4457999999999999999999999 99999999997644
No 180
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.45 E-value=2.9e-07 Score=96.08 Aligned_cols=33 Identities=33% Similarity=0.636 Sum_probs=29.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVD 116 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE 116 (503)
.+|||+||||||+|+++|+.|++..|++|+|||
T Consensus 2 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 2 RAYDLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ccccEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 369999999999999999999862499999999
No 181
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=98.42 E-value=1.4e-06 Score=90.27 Aligned_cols=98 Identities=24% Similarity=0.300 Sum_probs=78.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||..|+-+|..|++ .|.+|+++|+.+.... .+
T Consensus 167 ~~vvVvGgG~~g~e~A~~l~~-~G~~Vtlv~~~~~~l~------------~~---------------------------- 205 (463)
T 2r9z_A 167 KRVAIIGAGYIGIELAGLLRS-FGSEVTVVALEDRLLF------------QF---------------------------- 205 (463)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSST------------TS----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCEEEEEEcCCcccc------------cc----------------------------
Confidence 479999999999999999999 9999999997643110 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCc-EEEeceEEecCCCCccc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGN-EIKASLIVDASGFASSF 229 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~-~i~a~~vI~A~G~~s~v 229 (503)
+ ..+.+.+.+.+++.|++++ +++|++++.+++++.|.+.+|+ ++.+|.||.|+|..+..
T Consensus 206 ----~-~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~~ 266 (463)
T 2r9z_A 206 ----D-PLLSATLAENMHAQGIETHLEFAVAALERDAQGTTLVAQDGTRLEGFDSVIWAVGRAPNT 266 (463)
T ss_dssp ----C-HHHHHHHHHHHHHTTCEEESSCCEEEEEEETTEEEEEETTCCEEEEESEEEECSCEEESC
T ss_pred ----C-HHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEeCCcEEEEcCEEEECCCCCcCC
Confidence 0 1122455666778899999 9999999987777888899998 89999999999987643
No 182
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=98.42 E-value=1.4e-06 Score=88.86 Aligned_cols=99 Identities=20% Similarity=0.299 Sum_probs=79.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||+|..|+-+|..|++ .|.+|+++|+.+....
T Consensus 152 ~~~vvViGgG~~g~e~A~~l~~-~g~~Vtvv~~~~~~l~----------------------------------------- 189 (415)
T 3lxd_A 152 AKNAVVIGGGYIGLEAAAVLTK-FGVNVTLLEALPRVLA----------------------------------------- 189 (415)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSTTT-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh-cCCeEEEEecCCchhh-----------------------------------------
Confidence 3579999999999999999999 9999999997653210
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEeCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
......+.+.+.+.+++.|++++ +++|+++..+++.+ .|.+.+|+++.||.||.|+|..+.
T Consensus 190 ---~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~v~l~dG~~i~aD~Vv~a~G~~p~ 252 (415)
T 3lxd_A 190 ---RVAGEALSEFYQAEHRAHGVDLRTGAAMDCIEGDGTKVTGVRMQDGSVIPADIVIVGIGIVPC 252 (415)
T ss_dssp ---TTSCHHHHHHHHHHHHHTTCEEEETCCEEEEEESSSBEEEEEESSSCEEECSEEEECSCCEES
T ss_pred ---hhcCHHHHHHHHHHHHhCCCEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECCCCccC
Confidence 00113455667777788999999 89999999876655 688899999999999999998664
No 183
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=98.41 E-value=6.1e-07 Score=93.80 Aligned_cols=113 Identities=14% Similarity=0.156 Sum_probs=71.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.+..|||||||+||+.+|..|++ .+++|+|||+++. -.|.+.|.+. . .+ .+.
T Consensus 41 ~KprVVIIGgG~AGl~~A~~L~~-~~~~VtLId~~~~-------~~~~PlL~~v-----a------------~G---~l~ 92 (502)
T 4g6h_A 41 DKPNVLILGSGWGAISFLKHIDT-KKYNVSIISPRSY-------FLFTPLLPSA-----P------------VG---TVD 92 (502)
T ss_dssp SSCEEEEECSSHHHHHHHHHSCT-TTCEEEEEESSSE-------EECGGGGGGT-----T------------TT---SSC
T ss_pred CCCCEEEECCcHHHHHHHHHhhh-CCCcEEEECCCCC-------cccccchhHH-----h------------hc---ccc
Confidence 34689999999999999999999 9999999997542 2222211110 0 00 000
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEe------------------CCCcEEEeceEEecCCC
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVC------------------DDGNEIKASLIVDASGF 225 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~------------------~~g~~i~a~~vI~A~G~ 225 (503)
.......-+ +.+ .....+++++..+|++|+.+...+.+.. .++.++.+|++|.|+|.
T Consensus 93 ~~~i~~p~~---~~~--~~~~~~v~~~~~~v~~ID~~~k~V~l~~~~~~~~~~~~~~~~~~~~~~~~~i~YD~LViAtGs 167 (502)
T 4g6h_A 93 EKSIIEPIV---NFA--LKKKGNVTYYEAEATSINPDRNTVTIKSLSAVSQLYQPENHLGLHQAEPAEIKYDYLISAVGA 167 (502)
T ss_dssp GGGGEEEHH---HHH--TTCSSCEEEEEEEEEEEEGGGTEEEEEEEEEEEECSSSCCCCCCCTTCCEEEECSEEEECCCC
T ss_pred HHHhhhhHH---HHH--HhhcCCeEEEEEEEEEEEhhhCEEEEeecccceeecccccccccccCCceEEeCCEEEEcCCc
Confidence 000000001 111 0123578888889999998887776643 34568999999999998
Q ss_pred Cccc
Q 010693 226 ASSF 229 (503)
Q Consensus 226 ~s~v 229 (503)
.+..
T Consensus 168 ~~~~ 171 (502)
T 4g6h_A 168 EPNT 171 (502)
T ss_dssp EECC
T ss_pred cccc
Confidence 7643
No 184
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=98.41 E-value=1.6e-06 Score=88.08 Aligned_cols=98 Identities=21% Similarity=0.369 Sum_probs=78.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++|+.+....
T Consensus 143 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtvv~~~~~~~~------------------------------------------ 179 (404)
T 3fg2_P 143 KHVVVIGAGFIGLEFAATARA-KGLEVDVVELAPRVMA------------------------------------------ 179 (404)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCCcchh------------------------------------------
Confidence 469999999999999999999 9999999997642100
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
......+.+.+.+.+++.|++++ +++|+++..+++.+ .|.+.+|+++.||.||.|+|..+.
T Consensus 180 --~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~~V~~~dG~~i~aD~Vv~a~G~~p~ 242 (404)
T 3fg2_P 180 --RVVTPEISSYFHDRHSGAGIRMHYGVRATEIAAEGDRVTGVVLSDGNTLPCDLVVVGVGVIPN 242 (404)
T ss_dssp --TTSCHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred --hccCHHHHHHHHHHHHhCCcEEEECCEEEEEEecCCcEEEEEeCCCCEEEcCEEEECcCCccC
Confidence 00012355667777888999999 99999999877655 588899999999999999997653
No 185
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=98.40 E-value=1.1e-06 Score=90.51 Aligned_cols=99 Identities=22% Similarity=0.232 Sum_probs=75.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
...+++|||||++|+.+|..|++ .|.+|+|+|+.+.... + .
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~-~----------~--------------------------- 188 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAK-AGKKVTVIDILDRPLG-V----------Y--------------------------- 188 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSTTT-T----------T---------------------------
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCeEEEEecCccccc-c----------c---------------------------
Confidence 45789999999999999999999 9999999998653210 0 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.++....+.+ +|+++.+|.||.|+|..+.
T Consensus 189 -----~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~v~~v~~-~~~~i~~d~vi~a~G~~p~ 247 (447)
T 1nhp_A 189 -----L-DKEFTDVLTEEMEANNITIATGETVERYEGDGRVQKVVT-DKNAYDADLVVVAVGVRPN 247 (447)
T ss_dssp -----C-CHHHHHHHHHHHHTTTEEEEESCCEEEEECSSBCCEEEE-SSCEEECSEEEECSCEEES
T ss_pred -----C-CHHHHHHHHHHHHhCCCEEEcCCEEEEEEccCcEEEEEE-CCCEEECCEEEECcCCCCC
Confidence 0 12355677777888999999 899999986632224555 5678999999999997664
No 186
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.40 E-value=1.4e-06 Score=90.00 Aligned_cols=98 Identities=14% Similarity=0.204 Sum_probs=76.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-+|+|||||+.|+-+|..|++ .|.+|+|+|+.+.... .
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~---------------------------- 208 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYAN-FGTKVTILEGAGEILS------------G---------------------------- 208 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSSST------------T----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCCcccc------------c----------------------------
Confidence 3589999999999999999999 9999999998653210 0
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC---CCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD---DGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.+++.+.+.+. +++++.+|.||.|+|..+.
T Consensus 209 ----~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 271 (455)
T 1ebd_A 209 ----F-EKQMAAIIKKRLKKKGVEVVTNALAKGAEEREDGVTVTYEANGETKTIDADYVLVTVGRRPN 271 (455)
T ss_dssp ----S-CHHHHHHHHHHHHHTTCEEEESEEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCEEES
T ss_pred ----c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCeEEEEEEeCCceeEEEcCEEEECcCCCcc
Confidence 0 12344556677778999999 8999999988777777664 4567999999999998653
No 187
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=98.40 E-value=1.5e-06 Score=90.25 Aligned_cols=98 Identities=20% Similarity=0.249 Sum_probs=76.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||||+.|+-+|..|++ .|.+|+|+|+.+.... .++
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~~~-------------------------- 223 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSR-LGSKVTVVEFQPQIGA------------SMD-------------------------- 223 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSSS------------SSC--------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHH-cCCEEEEEEeCCcccc------------ccC--------------------------
Confidence 3579999999999999999999 9999999998653110 000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEE--eCCEEEEEeC-----CCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNH--QEFESSIVCD-----DGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~--~~~~~~v~~~-----~g~~i~a~~vI~A~G~~s~ 228 (503)
..+.+.+.+.+++.|++++ +++|+++.. +++.+.|.+. +++++.+|.||.|+|..+.
T Consensus 224 -------~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 288 (478)
T 1v59_A 224 -------GEVAKATQKFLKKQGLDFKLSTKVISAKRNDDKNVVEIVVEDTKTNKQENLEAEVLLVAVGRRPY 288 (478)
T ss_dssp -------HHHHHHHHHHHHHTTCEEECSEEEEEEEEETTTTEEEEEEEETTTTEEEEEEESEEEECSCEEEC
T ss_pred -------HHHHHHHHHHHHHCCCEEEeCCEEEEEEEecCCCeEEEEEEEcCCCCceEEECCEEEECCCCCcC
Confidence 3355667777788999999 999999987 5556667665 3467999999999998664
No 188
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=98.37 E-value=5.6e-06 Score=88.38 Aligned_cols=94 Identities=16% Similarity=0.240 Sum_probs=74.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||..|+-+|..|++ .|.+|+++|+.+.... .
T Consensus 188 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~-----------------------------------------~ 225 (588)
T 3ics_A 188 RHATVIGGGFIGVEMVENLRE-RGIEVTLVEMANQVMP-----------------------------------------P 225 (588)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSCT-----------------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCcccc-----------------------------------------c
Confidence 479999999999999999999 9999999997542110 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+ ...+.+.+.+.+++.|++++ +++|++++.+++ .|.+.+|+++.+|.||.|+|..+
T Consensus 226 ~----~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~--~v~~~~g~~i~~D~Vi~a~G~~p 282 (588)
T 3ics_A 226 I----DYEMAAYVHEHMKNHDVELVFEDGVDALEENGA--VVRLKSGSVIQTDMLILAIGVQP 282 (588)
T ss_dssp S----CHHHHHHHHHHHHHTTCEEECSCCEEEEEGGGT--EEEETTSCEEECSEEEECSCEEE
T ss_pred C----CHHHHHHHHHHHHHcCCEEEECCeEEEEecCCC--EEEECCCCEEEcCEEEEccCCCC
Confidence 0 11235566667778999999 899999987655 36678888999999999999754
No 189
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=98.36 E-value=2.3e-07 Score=91.47 Aligned_cols=46 Identities=30% Similarity=0.422 Sum_probs=37.4
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHc-cCCCcEEEEcCCCCCCCCCcc
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSS-RHSVKVCCVDPSPLSTWPNNY 127 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~-~~G~~V~viE~~~~~~~~~~~ 127 (503)
+...+||+|||||||||+||+.|++ +.|++|+|||+.+..+....+
T Consensus 62 ~~~~~DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk~~~~GG~~~~ 108 (326)
T 3fpz_A 62 KFAVSDVIIVGAGSSGLSAAYVIAKNRPDLKVCIIESSVAPGGGSWL 108 (326)
T ss_dssp HTTEESEEEECCSHHHHHHHHHHHHHCTTSCEEEECSSSSCCTTTTC
T ss_pred hccCCCEEEECCCHHHHHHHHHHHHhCCCCeEEEEECCCCCCceEEe
Confidence 3457999999999999999999974 269999999998766543333
No 190
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=98.36 E-value=1.3e-06 Score=98.50 Aligned_cols=112 Identities=18% Similarity=0.271 Sum_probs=71.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
..+||+||||||||+++|..|++ .|++|+|||+.+..+ |.+. . + +.. .++.
T Consensus 127 ~~~dVvVIGaGpAGl~AA~~la~-~G~~V~lie~~~~~G-----G~~~-~--------~-----~k~--~i~~------- 177 (965)
T 2gag_A 127 VHTDVLVVGAGPAGLAAAREASR-SGARVMLLDERAEAG-----GTLL-D--------T-----AGE--QIDG------- 177 (965)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSS-----GGGG-G--------S-----SCC--EETT-------
T ss_pred cCCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCCCC-----ceec-c--------C-----Ccc--ccCC-------
Confidence 46899999999999999999999 999999999865422 2221 0 0 000 0010
Q ss_pred CCccccCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEEEEE---------e------CCCcEEEeceEEecCCCC
Q 010693 164 RPYGRVSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFESSIV---------C------DDGNEIKASLIVDASGFA 226 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v~---------~------~~g~~i~a~~vI~A~G~~ 226 (503)
.....+...+.+.+.+ .+++++ +++|.++..++....+. . .++.++.+|.||.|+|..
T Consensus 178 -----~~~~~~~~~~~~~l~~~~~v~~~~~~~V~~i~~~~~~~~v~~~~~~~~v~~~~~~~~~~~~~i~~d~lVlATGs~ 252 (965)
T 2gag_A 178 -----MDSSAWIEQVTSELAEAEETTHLQRTTVFGSYDANYLIAAQRRTVHLDGPSGPGVSRERIWHIRAKQVVLATGAH 252 (965)
T ss_dssp -----EEHHHHHHHHHHHHHHSTTEEEESSEEEEEEETTTEEEEEEECSTTCSSCCCTTCCSEEEEEEEEEEEEECCCEE
T ss_pred -----CCHHHHHHHHHHHHhhcCCcEEEeCCEEEeeecCCceeeeEeecccccccccccCCCCceEEEECCEEEECCCCc
Confidence 0122344455555656 589999 88998886433211111 1 112369999999999986
Q ss_pred ccc
Q 010693 227 SSF 229 (503)
Q Consensus 227 s~v 229 (503)
...
T Consensus 253 p~~ 255 (965)
T 2gag_A 253 ERP 255 (965)
T ss_dssp ECC
T ss_pred cCC
Confidence 544
No 191
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=98.35 E-value=2.1e-06 Score=89.34 Aligned_cols=98 Identities=22% Similarity=0.290 Sum_probs=79.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-+++|||+|+.|+-+|..|++ .|.+|+++++.+.... .+
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~-~g~~Vtli~~~~~~l~------------~~--------------------------- 230 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHG-LGVKTTLLHRGDLILR------------NF--------------------------- 230 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSST------------TS---------------------------
T ss_pred CCcEEEECcCHHHHHHHHHHHH-cCCeEEEEECCCcccc------------cc---------------------------
Confidence 3579999999999999999999 9999999997652110 00
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.+++.+.|.+.+|+++.||.||.|+|..+.
T Consensus 231 ------~~~~~~~l~~~l~~~Gv~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vi~A~G~~p~ 289 (484)
T 3o0h_A 231 ------DYDLRQLLNDAMVAKGISIIYEATVSQVQSTENCYNVVLTNGQTICADRVMLATGRVPN 289 (484)
T ss_dssp ------CHHHHHHHHHHHHHHTCEEESSCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEEC
T ss_pred ------CHHHHHHHHHHHHHCCCEEEeCCEEEEEEeeCCEEEEEECCCcEEEcCEEEEeeCCCcC
Confidence 02244556677777899999 89999999888788899999989999999999998654
No 192
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=98.35 E-value=9.4e-07 Score=90.00 Aligned_cols=98 Identities=16% Similarity=0.160 Sum_probs=78.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++|+.+... .
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtvv~~~~~~l---------~--------------------------------- 180 (410)
T 3ef6_A 144 TRLLIVGGGLIGCEVATTARK-LGLSVTILEAGDELL---------V--------------------------------- 180 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSS---------H---------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCeEEEEecCCccc---------h---------------------------------
Confidence 579999999999999999999 999999999764311 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
......+.+.+.+.+++.|++++ +++|++++.++....|.+.||+++.||.||.|+|..+.
T Consensus 181 --~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~~dg~~i~aD~Vv~a~G~~p~ 242 (410)
T 3ef6_A 181 --RVLGRRIGAWLRGLLTELGVQVELGTGVVGFSGEGQLEQVMASDGRSFVADSALICVGAEPA 242 (410)
T ss_dssp --HHHCHHHHHHHHHHHHHHTCEEECSCCEEEEECSSSCCEEEETTSCEEECSEEEECSCEEEC
T ss_pred --hhcCHHHHHHHHHHHHHCCCEEEeCCEEEEEeccCcEEEEEECCCCEEEcCEEEEeeCCeec
Confidence 00012345566677778899999 99999998766555788999999999999999998664
No 193
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=98.33 E-value=3.5e-06 Score=87.39 Aligned_cols=42 Identities=7% Similarity=0.136 Sum_probs=37.8
Q ss_pred CcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 186 GVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 186 gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
|++++ +++|++|..+++++.|++.+|++++||.||.|.+...
T Consensus 228 ~~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~ad~vI~a~~~~~ 270 (472)
T 1b37_A 228 DPRLQLNKVVREIKYSPGGVTVKTEDNSVYSADYVMVSASLGV 270 (472)
T ss_dssp CTTEESSCCEEEEEECSSCEEEEETTSCEEEESEEEECSCHHH
T ss_pred ccEEEcCCEEEEEEEcCCcEEEEECCCCEEEcCEEEEecCHHH
Confidence 67888 9999999998888999999998999999999998654
No 194
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=98.31 E-value=8e-06 Score=84.11 Aligned_cols=95 Identities=22% Similarity=0.306 Sum_probs=71.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-+++|||||+.|+-+|..|++ .|.+|+++|+.+.... . .
T Consensus 149 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------~ 187 (449)
T 3kd9_A 149 ENVVIIGGGYIGIEMAEAFAA-QGKNVTMIVRGERVLR------------R----------------------------S 187 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSTTT------------T----------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCeEEEEEcCCccch------------h----------------------------h
Confidence 389999999999999999999 9999999997652110 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
. ...+.+.+.+.+++. ++++ +++|.+++.++ .+.....+|+++.+|.||.|+|..+
T Consensus 188 ---~-~~~~~~~l~~~l~~~-v~i~~~~~v~~i~~~~-~v~~v~~~g~~i~~D~Vv~a~G~~p 244 (449)
T 3kd9_A 188 ---F-DKEVTDILEEKLKKH-VNLRLQEITMKIEGEE-RVEKVVTDAGEYKAELVILATGIKP 244 (449)
T ss_dssp ---S-CHHHHHHHHHHHTTT-SEEEESCCEEEEECSS-SCCEEEETTEEEECSEEEECSCEEE
T ss_pred ---c-CHHHHHHHHHHHHhC-cEEEeCCeEEEEeccC-cEEEEEeCCCEEECCEEEEeeCCcc
Confidence 0 023455666666667 9999 89999998655 3433455677899999999998754
No 195
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=98.30 E-value=2.5e-06 Score=87.40 Aligned_cols=98 Identities=19% Similarity=0.342 Sum_probs=76.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+....
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~-~G~~Vtlv~~~~~~l~------------------------------------------ 186 (431)
T 1q1r_A 150 NRLVVIGGGYIGLEVAATAIK-ANMHVTLLDTAARVLE------------------------------------------ 186 (431)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSTTT------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEEeCCcccc------------------------------------------
Confidence 479999999999999999999 9999999997542100
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEE--eCCEE-EEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNH--QEFES-SIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~--~~~~~-~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
......+.+.+.+.+++.|++++ +++|++++. +++.+ .|.+.+|+++.||.||.|+|..+.
T Consensus 187 --~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~v~~v~~~~G~~i~~D~Vv~a~G~~p~ 251 (431)
T 1q1r_A 187 --RVTAPPVSAFYEHLHREAGVDIRTGTQVCGFEMSTDQQKVTAVLCEDGTRLPADLVIAGIGLIPN 251 (431)
T ss_dssp --TTSCHHHHHHHHHHHHHHTCEEECSCCEEEEEECTTTCCEEEEEETTSCEEECSEEEECCCEEEC
T ss_pred --chhhHHHHHHHHHHHHhCCeEEEeCCEEEEEEeccCCCcEEEEEeCCCCEEEcCEEEECCCCCcC
Confidence 00012244556666777899999 899999987 44444 678889999999999999997653
No 196
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.30 E-value=2.3e-07 Score=97.00 Aligned_cols=34 Identities=26% Similarity=0.495 Sum_probs=30.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDP 117 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~ 117 (503)
.+|||+||||||||+++|+.|++..|++|+|||+
T Consensus 6 ~~~dvvVIGgG~aGl~aA~~la~~~G~~V~liE~ 39 (495)
T 2wpf_A 6 KAFDLVVIGAGSGGLEAGWNAATLYGKRVAVVDV 39 (495)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHHHCCCEEEEES
T ss_pred cccCEEEECCChhHHHHHHHHHHhcCCeEEEEec
Confidence 3699999999999999999998623999999993
No 197
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=98.27 E-value=4.3e-06 Score=87.93 Aligned_cols=98 Identities=9% Similarity=0.128 Sum_probs=78.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||..|+-+|..|++ .|.+|+++|+.+.... .
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~-~G~~Vtlv~~~~~~l~------------~----------------------------- 252 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNA-TGRRTVMLVRTEPLKL------------I----------------------------- 252 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCTTTT------------C-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCeEEEEEecCcccc------------c-----------------------------
Confidence 579999999999999999999 9999999997653110 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE----EEEEeCCCc-EEEeceEEecCCCCccc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE----SSIVCDDGN-EIKASLIVDASGFASSF 229 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~----~~v~~~~g~-~i~a~~vI~A~G~~s~v 229 (503)
. ...+.+.+.+.+++.|++++ +++|+++..++++ +.|.+.+|+ ++.||.||.|+|..+..
T Consensus 253 ---~-~~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~~v~~~~v~~~~G~~~i~aD~Vv~A~G~~p~~ 318 (523)
T 1mo9_A 253 ---K-DNETRAYVLDRMKEQGMEIISGSNVTRIEEDANGRVQAVVAMTPNGEMRIETDFVFLGLGEQPRS 318 (523)
T ss_dssp ---C-SHHHHHHHHHHHHHTTCEEESSCEEEEEEECTTSBEEEEEEEETTEEEEEECSCEEECCCCEECC
T ss_pred ---c-cHHHHHHHHHHHHhCCcEEEECCEEEEEEEcCCCceEEEEEEECCCcEEEEcCEEEECcCCccCC
Confidence 0 11234566777778999999 9999999876554 778888887 89999999999987643
No 198
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=98.27 E-value=3.3e-06 Score=87.56 Aligned_cols=99 Identities=20% Similarity=0.247 Sum_probs=80.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC-CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH-SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~-G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
.-+++|||+|+.|+-+|..|++ . |.+|+++|+.+.... +
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~-~~g~~Vtlv~~~~~~l~-~-------------------------------------- 198 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLAD-MWGIDTTVVELADQIMP-G-------------------------------------- 198 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-HHCCEEEEECSSSSSST-T--------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHH-hcCCcEEEEEccCcccc-c--------------------------------------
Confidence 3579999999999999999999 9 999999997542100 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
. . ...+.+.+.+.+++.|++++ +++|++++.+++.+.+.+.+|+++.||.||.|+|..+.
T Consensus 199 -~---~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~ 259 (472)
T 3iwa_A 199 -F---T-SKSLSQMLRHDLEKNDVVVHTGEKVVRLEGENGKVARVITDKRTLDADLVILAAGVSPN 259 (472)
T ss_dssp -T---S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSSBEEEEEESSCEEECSEEEECSCEEEC
T ss_pred -c---c-CHHHHHHHHHHHHhcCCEEEeCCEEEEEEccCCeEEEEEeCCCEEEcCEEEECCCCCcC
Confidence 0 0 12356677777788999999 89999999877778888889999999999999998653
No 199
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=98.27 E-value=4e-06 Score=85.26 Aligned_cols=95 Identities=24% Similarity=0.353 Sum_probs=74.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||||..|+-+|..|++ .|.+|+++|+.+....
T Consensus 145 ~~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~----------------------------------------- 182 (408)
T 2gqw_A 145 QSRLLIVGGGVIGLELAATART-AGVHVSLVETQPRLMS----------------------------------------- 182 (408)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSSST-----------------------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh-CCCEEEEEEeCCcccc-----------------------------------------
Confidence 3579999999999999999999 9999999998653110
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
......+.+.+.+.+++.|++++ +++|++++ ++ .|++.+|+++.||.||.|+|..+.
T Consensus 183 ---~~~~~~~~~~l~~~l~~~GV~i~~~~~v~~i~--~~--~v~~~~g~~i~~D~vi~a~G~~p~ 240 (408)
T 2gqw_A 183 ---RAAPATLADFVARYHAAQGVDLRFERSVTGSV--DG--VVLLDDGTRIAADMVVVGIGVLAN 240 (408)
T ss_dssp ---TTSCHHHHHHHHHHHHHTTCEEEESCCEEEEE--TT--EEEETTSCEEECSEEEECSCEEEC
T ss_pred ---cccCHHHHHHHHHHHHHcCcEEEeCCEEEEEE--CC--EEEECCCCEEEcCEEEECcCCCcc
Confidence 00012244566677778999999 89999998 33 677788989999999999997653
No 200
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=98.27 E-value=5.2e-06 Score=86.16 Aligned_cols=98 Identities=14% Similarity=0.154 Sum_probs=76.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+.... +.
T Consensus 179 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~-~~--------------------------------------- 217 (474)
T 1zmd_A 179 EKMVVIGAGVIGVELGSVWQR-LGADVTAVEFLGHVGG-VG--------------------------------------- 217 (474)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSSC-SS---------------------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH-cCCEEEEEeccCccCC-cc---------------------------------------
Confidence 579999999999999999999 9999999998653210 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE-EEEEe-----CCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE-SSIVC-----DDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~~-----~~g~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.++++ +.+.+ .+++++.+|.||.|+|..+.
T Consensus 218 ---~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~i~~D~vv~a~G~~p~ 283 (474)
T 1zmd_A 218 ---I-DMEISKNFQRILQKQGFKFKLNTKVTGATKKSDGKIDVSIEAASGGKAEVITCDVLLVCIGRRPF 283 (474)
T ss_dssp ---C-CHHHHHHHHHHHHHTTCEEECSEEEEEEEECTTSCEEEEEEETTSCCCEEEEESEEEECSCEEEC
T ss_pred ---c-CHHHHHHHHHHHHHCCCEEEeCceEEEEEEcCCceEEEEEEecCCCCceEEEcCEEEECcCCCcC
Confidence 0 12234566677778999999 9999999987655 66664 45668999999999997653
No 201
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=98.26 E-value=4.7e-06 Score=85.54 Aligned_cols=111 Identities=9% Similarity=0.113 Sum_probs=69.7
Q ss_pred cEEEECCCHHHHHHHHHHHccCC--CcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHS--VKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G--~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.|+||||||||+++|..|++ .| .+|+|||+++...+. .|+ ... .+.. ... ....
T Consensus 2 KVvIIG~G~AGl~aA~~l~~-~g~~~~V~lie~~~~~~~~-~~~--l~~--------~~~~-----------~~~-~~~~ 57 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRR-LDKESDIIIFEKDRDMSFA-NCA--LPY--------VIGE-----------VVE-DRRY 57 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHH-HCSSSCEEEEESSSCSSBC-GGG--HHH--------HHTT-----------SSC-CGGG
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCCCcEEEEeCCCCCCCC-cch--hHH--------HHcC-----------Ccc-chhh
Confidence 59999999999999999999 77 579999987532221 111 111 0000 000 0000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCC---CcEEEeceEEecCCCCccc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDD---GNEIKASLIVDASGFASSF 229 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~---g~~i~a~~vI~A~G~~s~v 229 (503)
.. ......+ ..+.|++++ +++|+.++.+...+.+.... +.++.+|.+|.|+|.....
T Consensus 58 ~~-~~~~~~~-------~~~~~i~~~~~~~V~~id~~~~~~~~~~~~~~~~~~~~yd~lVIATGs~p~~ 118 (437)
T 4eqs_A 58 AL-AYTPEKF-------YDRKQITVKTYHEVIAINDERQTVSVLNRKTNEQFEESYDKLILSPGASANS 118 (437)
T ss_dssp TB-CCCHHHH-------HHHHCCEEEETEEEEEEETTTTEEEEEETTTTEEEEEECSEEEECCCEEECC
T ss_pred hh-hcCHHHH-------HHhcCCEEEeCCeEEEEEccCcEEEEEeccCCceEEEEcCEEEECCCCcccc
Confidence 00 0112222 234689998 89999998877777665543 2368999999999986643
No 202
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=98.25 E-value=5.1e-06 Score=86.83 Aligned_cols=98 Identities=17% Similarity=0.195 Sum_probs=79.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||+.|+-+|..|++ .|.+|+++|+.+.... .
T Consensus 183 ~~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------- 220 (499)
T 1xdi_A 183 DHLIVVGSGVTGAEFVDAYTE-LGVPVTVVASQDHVLP------------Y----------------------------- 220 (499)
T ss_dssp SSEEEESCSHHHHHHHHHHHH-TTCCEEEECSSSSSSC------------C-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCeEEEEEcCCcccc------------c-----------------------------
Confidence 579999999999999999999 9999999997653110 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCccc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSF 229 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~v 229 (503)
. ...+.+.+.+.+++.|++++ +++|++++.+++++.|.+.+|+++.+|.||.|.|..+..
T Consensus 221 ---~-d~~~~~~l~~~l~~~GV~i~~~~~V~~i~~~~~~v~v~~~~g~~i~aD~Vv~a~G~~p~~ 281 (499)
T 1xdi_A 221 ---E-DADAALVLEESFAERGVRLFKNARAASVTRTGAGVLVTMTDGRTVEGSHALMTIGSVPNT 281 (499)
T ss_dssp ---S-SHHHHHHHHHHHHHTTCEEETTCCEEEEEECSSSEEEEETTSCEEEESEEEECCCEEECC
T ss_pred ---c-CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEeCCEEEEEECCCcEEEcCEEEECCCCCcCC
Confidence 0 01245566777778999999 999999998776788888888899999999999987643
No 203
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=98.25 E-value=5.2e-06 Score=86.00 Aligned_cols=97 Identities=18% Similarity=0.242 Sum_probs=75.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||+.|+-+|..|++ .|.+|+++|+.+.... .+
T Consensus 175 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~~---------------------------- 213 (468)
T 2qae_A 175 KTMVVIGGGVIGLELGSVWAR-LGAEVTVVEFAPRCAP------------TL---------------------------- 213 (468)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSST------------TS----------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHH-hCCEEEEEecCCcccc------------cC----------------------------
Confidence 579999999999999999999 9999999998653210 00
Q ss_pred ccccCHHHHHHHHHHHH-HhCCcEEE-EeEEEEEEEeCCEEEEEeC--CC--cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENC-VSNGVKFH-KAKVWHVNHQEFESSIVCD--DG--NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~-~~~gv~~~-~~~v~~i~~~~~~~~v~~~--~g--~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+ ++.|++++ +++|++++.+++.+.+.+. +| +++.+|.||.|+|..+.
T Consensus 214 -----d~~~~~~l~~~l~~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~g~~~~i~~D~vv~a~G~~p~ 277 (468)
T 2qae_A 214 -----DEDVTNALVGALAKNEKMKFMTSTKVVGGTNNGDSVSLEVEGKNGKRETVTCEALLVSVGRRPF 277 (468)
T ss_dssp -----CHHHHHHHHHHHHHHTCCEEECSCEEEEEEECSSSEEEEEECC---EEEEEESEEEECSCEEEC
T ss_pred -----CHHHHHHHHHHHhhcCCcEEEeCCEEEEEEEcCCeEEEEEEcCCCceEEEECCEEEECCCcccC
Confidence 122445666777 78999999 8999999987666777765 66 57999999999998664
No 204
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=98.25 E-value=3.6e-06 Score=87.60 Aligned_cols=99 Identities=15% Similarity=0.059 Sum_probs=78.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.++|||||..|+-+|..|++ .|.+|+|+|+.+.... .+
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~-~G~~Vtlv~~~~~~l~------------~~--------------------------- 224 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYST-LGSRLDVVEMMDGLMQ------------GA--------------------------- 224 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHH-HTCEEEEECSSSSSST------------TS---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCeEEEEEECCcccc------------cc---------------------------
Confidence 3579999999999999999999 9999999997653110 00
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCC----CcEEEeceEEecCCCCccc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDD----GNEIKASLIVDASGFASSF 229 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~----g~~i~a~~vI~A~G~~s~v 229 (503)
...+.+.+.+.+++.|++++ +++|++++.+++.+.|.+.+ |+++.+|.||.|+|..+..
T Consensus 225 ------~~~~~~~l~~~l~~~gV~i~~~~~v~~i~~~~~~~~v~~~~~~~~g~~~~~D~vv~a~G~~p~~ 288 (482)
T 1ojt_A 225 ------DRDLVKVWQKQNEYRFDNIMVNTKTVAVEPKEDGVYVTFEGANAPKEPQRYDAVLVAAGRAPNG 288 (482)
T ss_dssp ------CHHHHHHHHHHHGGGEEEEECSCEEEEEEEETTEEEEEEESSSCCSSCEEESCEEECCCEEECG
T ss_pred ------CHHHHHHHHHHHHhcCCEEEECCEEEEEEEcCCeEEEEEeccCCCceEEEcCEEEECcCCCcCC
Confidence 01234556666778899999 99999999887777787776 7789999999999987643
No 205
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=98.24 E-value=4.4e-06 Score=87.09 Aligned_cols=97 Identities=15% Similarity=0.190 Sum_probs=77.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccC---CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH---SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~---G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
-.++|||||+.|+-+|..|++ . |.+|+++|+.+.... .+
T Consensus 188 ~~vvViGgG~ig~E~A~~l~~-~~~~g~~Vtlv~~~~~~l~------------~~------------------------- 229 (490)
T 1fec_A 188 KRALCVGGGYISIEFAGIFNA-YKARGGQVDLAYRGDMILR------------GF------------------------- 229 (490)
T ss_dssp SEEEEECSSHHHHHHHHHHHH-HSCTTCEEEEEESSSSSST------------TS-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-hccCcCeEEEEEcCCCccc------------cc-------------------------
Confidence 479999999999999999999 8 999999998653110 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 230 --------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 289 (490)
T 1fec_A 230 --------DSELRKQLTEQLRANGINVRTHENPAKVTKNADGTRHVVFESGAEADYDVVMLAIGRVPR 289 (490)
T ss_dssp --------CHHHHHHHHHHHHHTTEEEEETCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEES
T ss_pred --------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCEEEEEECCCcEEEcCEEEEccCCCcC
Confidence 01245667777778999999 899999987654 57888888889999999999998654
No 206
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=98.23 E-value=8.9e-06 Score=83.84 Aligned_cols=98 Identities=24% Similarity=0.303 Sum_probs=75.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||..|+-+|..|++ .|.+|+++|+.+.... + .
T Consensus 150 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~-~----------~----------------------------- 188 (452)
T 2cdu_A 150 KTITIIGSGYIGAELAEAYSN-QNYNVNLIDGHERVLY-K----------Y----------------------------- 188 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSTTT-T----------T-----------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHh-cCCEEEEEEcCCchhh-h----------h-----------------------------
Confidence 479999999999999999999 9999999997643110 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.+++.+.....+|+++.||.||.|+|..+.
T Consensus 189 ---~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~v~~v~~~g~~i~~D~vv~a~G~~p~ 248 (452)
T 2cdu_A 189 ---F-DKEFTDILAKDYEAHGVNLVLGSKVAAFEEVDDEIITKTLDGKEIKSDIAILCIGFRPN 248 (452)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEEESSCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred ---h-hhhHHHHHHHHHHHCCCEEEcCCeeEEEEcCCCeEEEEEeCCCEEECCEEEECcCCCCC
Confidence 0 02245566777788999999 89999998766666533447889999999999997664
No 207
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=98.22 E-value=8.1e-06 Score=85.10 Aligned_cols=97 Identities=21% Similarity=0.256 Sum_probs=76.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+.... .
T Consensus 199 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------- 236 (491)
T 3urh_A 199 ASMIVVGGGVIGLELGSVWAR-LGAKVTVVEFLDTILG------------G----------------------------- 236 (491)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSSSS------------S-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCEEEEEeccccccc------------c-----------------------------
Confidence 479999999999999999999 9999999997642110 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCC---C--cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDD---G--NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~---g--~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.+++.+.+.+.+ | +++.+|.||.|+|..+.
T Consensus 237 ---~-d~~~~~~l~~~l~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~Vi~a~G~~p~ 301 (491)
T 3urh_A 237 ---M-DGEVAKQLQRMLTKQGIDFKLGAKVTGAVKSGDGAKVTFEPVKGGEATTLDAEVVLIATGRKPS 301 (491)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEECSEEEEEEEEETTEEEEEEEETTSCCCEEEEESEEEECCCCEEC
T ss_pred ---C-CHHHHHHHHHHHHhCCCEEEECCeEEEEEEeCCEEEEEEEecCCCceEEEEcCEEEEeeCCccC
Confidence 0 02345566677778999999 99999999888887777753 4 47999999999998654
No 208
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=98.22 E-value=4.7e-06 Score=86.63 Aligned_cols=97 Identities=16% Similarity=0.218 Sum_probs=75.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||+.|+-+|..|++ .|.+|+++|+.+.... .+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~~---------------------------- 224 (479)
T 2hqm_A 186 KKVVVVGAGYIGIELAGVFHG-LGSETHLVIRGETVLR------------KF---------------------------- 224 (479)
T ss_dssp SEEEEECSSHHHHHHHHHHHH-TTCEEEEECSSSSSCT------------TS----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCceEEEEeCCcccc------------cc----------------------------
Confidence 579999999999999999999 9999999997653110 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE--EEEEeCCC-cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE--SSIVCDDG-NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~--~~v~~~~g-~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.++++ +.|.+.+| +++.+|.||.|+|..+.
T Consensus 225 -----d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~~v~~~~G~~~i~~D~vv~a~G~~p~ 286 (479)
T 2hqm_A 225 -----DECIQNTITDHYVKEGINVHKLSKIVKVEKNVETDKLKIHMNDSKSIDDVDELIWTIGRKSH 286 (479)
T ss_dssp -----CHHHHHHHHHHHHHHTCEEECSCCEEEEEECC-CCCEEEEETTSCEEEEESEEEECSCEEEC
T ss_pred -----CHHHHHHHHHHHHhCCeEEEeCCEEEEEEEcCCCcEEEEEECCCcEEEEcCEEEECCCCCCc
Confidence 01233455666667899999 9999999876544 77888888 78999999999997654
No 209
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=98.21 E-value=1.1e-05 Score=85.56 Aligned_cols=37 Identities=27% Similarity=0.448 Sum_probs=33.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCC-CcEEEEcCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHS-VKVCCVDPSPL 120 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G-~~V~viE~~~~ 120 (503)
...||+||||||.||+.+|..|++ .| .+|+|||+++.
T Consensus 4 ~~~yDyIVVGgG~AG~v~A~rLse-~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 4 GSHFDFVIVGGGTAGNTVAGRLAE-NPNVTVLIVEAGIG 41 (577)
T ss_dssp TCEEEEEEESCSHHHHHHHHHHTT-STTSCEEEECSSCS
T ss_pred CCcccEEEECCcHHHHHHHHHHHh-CCCCcEEEEecCCC
Confidence 356999999999999999999999 77 79999999876
No 210
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.20 E-value=3.3e-06 Score=87.23 Aligned_cols=96 Identities=17% Similarity=0.149 Sum_probs=73.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-+|+|||||++|+-+|..|++ .|.+|+|+|+.+.... .+
T Consensus 172 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~~---------------------------- 210 (458)
T 1lvl_A 172 QHLVVVGGGYIGLELGIAYRK-LGAQVSVVEARERILP------------TY---------------------------- 210 (458)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-HTCEEEEECSSSSSST------------TS----------------------------
T ss_pred CeEEEECcCHHHHHHHHHHHH-CCCeEEEEEcCCcccc------------cc----------------------------
Confidence 579999999999999999999 9999999998653210 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCCccc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFASSF 229 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~s~v 229 (503)
...+.+.+.+.+++.|++++ +++|++++. + .+.+...+| +++.+|.||.|+|..+..
T Consensus 211 -----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~-~-~v~v~~~~G~~~~i~~D~vv~a~G~~p~~ 270 (458)
T 1lvl_A 211 -----DSELTAPVAESLKKLGIALHLGHSVEGYEN-G-CLLANDGKGGQLRLEADRVLVAVGRRPRT 270 (458)
T ss_dssp -----CHHHHHHHHHHHHHHTCEEETTCEEEEEET-T-EEEEECSSSCCCEECCSCEEECCCEEECC
T ss_pred -----CHHHHHHHHHHHHHCCCEEEECCEEEEEEe-C-CEEEEECCCceEEEECCEEEECcCCCcCC
Confidence 01234455666677899999 999999986 4 355654456 589999999999987643
No 211
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=98.20 E-value=9.4e-06 Score=83.68 Aligned_cols=97 Identities=14% Similarity=0.156 Sum_probs=77.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||+|..|+-+|..|++ .|.+|+++|+.+.... . .
T Consensus 148 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------~ 186 (452)
T 3oc4_A 148 QTVAVIGAGPIGMEAIDFLVK-MKKTVHVFESLENLLP------------K----------------------------Y 186 (452)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSSST------------T----------------------------T
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEEccCcccc------------c----------------------------c
Confidence 569999999999999999999 9999999997643110 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.+++++.|.+++| ++.||.||.|+|....
T Consensus 187 ---~-d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v~v~~~~g-~i~aD~Vv~A~G~~p~ 245 (452)
T 3oc4_A 187 ---F-DKEMVAEVQKSLEKQAVIFHFEETVLGIEETANGIVLETSEQ-EISCDSGIFALNLHPQ 245 (452)
T ss_dssp ---C-CHHHHHHHHHHHHTTTEEEEETCCEEEEEECSSCEEEEESSC-EEEESEEEECSCCBCC
T ss_pred ---C-CHHHHHHHHHHHHHcCCEEEeCCEEEEEEccCCeEEEEECCC-EEEeCEEEECcCCCCC
Confidence 0 12345667777778999999 899999997777777888777 8999999999998654
No 212
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=98.19 E-value=1e-05 Score=83.80 Aligned_cols=95 Identities=17% Similarity=0.225 Sum_probs=76.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+... . .
T Consensus 177 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l------------~-~---------------------------- 214 (467)
T 1zk7_A 177 ERLAVIGSSVVALELAQAFAR-LGSKVTVLARNTLFF------------R-E---------------------------- 214 (467)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCTTT------------T-S----------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH-cCCEEEEEEECCccC------------C-C----------------------------
Confidence 479999999999999999999 999999999754210 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.+++.+.|.++ +.++.+|.||.|+|..+.
T Consensus 215 -----~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~v~~~-~~~i~aD~Vv~a~G~~p~ 272 (467)
T 1zk7_A 215 -----DPAIGEAVTAAFRAEGIEVLEHTQASQVAHMDGEFVLTTT-HGELRADKLLVATGRTPN 272 (467)
T ss_dssp -----CHHHHHHHHHHHHHTTCEEETTCCEEEEEEETTEEEEEET-TEEEEESEEEECSCEEES
T ss_pred -----CHHHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEC-CcEEEcCEEEECCCCCcC
Confidence 02345667777778999999 9999999987777777776 458999999999998764
No 213
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=98.19 E-value=9.9e-06 Score=79.03 Aligned_cols=94 Identities=16% Similarity=0.214 Sum_probs=72.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+....
T Consensus 146 ~~v~ViG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~~~------------------------------------------ 182 (320)
T 1trb_A 146 QKVAVIGGGNTAVEEALYLSN-IASEVHLIHRRDGFRA------------------------------------------ 182 (320)
T ss_dssp SEEEEECSSHHHHHHHHHHTT-TSSEEEEECSSSSCCC------------------------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCeEEEEEeCCcccc------------------------------------------
Confidence 479999999999999999999 9999999997642100
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEeCC----C--cEEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVCDD----G--NEIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~~~----g--~~i~a~~vI~A~G~~s 227 (503)
...+.+.+.+.+.+.|++++ +++|+++..+++.+ .|.+.+ | .++.+|.||.|+|..+
T Consensus 183 -----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~~g~~~~i~~D~vv~a~G~~p 247 (320)
T 1trb_A 183 -----EKILIKRLMDKVENGNIILHTNRTLEEVTGDQMGVTGVRLRDTQNSDNIESLDVAGLFVAIGHSP 247 (320)
T ss_dssp -----CHHHHHHHHHHHHTSSEEEECSCEEEEEEECSSSEEEEEEECCTTCCCCEEEECSEEEECSCEEE
T ss_pred -----CHHHHHHHHHhcccCCeEEEcCceeEEEEcCCCceEEEEEEeccCCCceEEEEcCEEEEEeCCCC
Confidence 02234456666778999999 99999998776433 355543 4 4799999999999765
No 214
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.18 E-value=4.3e-06 Score=86.65 Aligned_cols=97 Identities=19% Similarity=0.281 Sum_probs=75.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+.... .+
T Consensus 178 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtli~~~~~~l~------------~~---------------------------- 216 (470)
T 1dxl_A 178 KKLVVIGAGYIGLEMGSVWGR-IGSEVTVVEFASEIVP------------TM---------------------------- 216 (470)
T ss_dssp SEEEESCCSHHHHHHHHHHHH-HTCEEEEECSSSSSST------------TS----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCcEEEEEcCCcccc------------cc----------------------------
Confidence 579999999999999999999 9999999998653210 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC---CC--cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD---DG--NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g--~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.+++.+.+.+. +| +++.+|.||.|+|..+.
T Consensus 217 -----~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p~ 280 (470)
T 1dxl_A 217 -----DAEIRKQFQRSLEKQGMKFKLKTKVVGVDTSGDGVKLTVEPSAGGEQTIIEADVVLVSAGRTPF 280 (470)
T ss_dssp -----CHHHHHHHHHHHHHSSCCEECSEEEEEEECSSSSEEEEEEESSSCCCEEEEESEEECCCCEEEC
T ss_pred -----cHHHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCeEEEEEEecCCCcceEEECCEEEECCCCCcC
Confidence 01344556677778999999 9999999877665666654 44 57999999999998663
No 215
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=98.17 E-value=6.3e-06 Score=85.70 Aligned_cols=97 Identities=20% Similarity=0.211 Sum_probs=73.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-+|+|||||++|+-+|..|++ .|.+|+++|+.+.... .+
T Consensus 186 ~~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~~--------------------------- 225 (480)
T 3cgb_A 186 VEDVTIIGGGAIGLEMAETFVE-LGKKVRMIERNDHIGT------------IY--------------------------- 225 (480)
T ss_dssp CCEEEEECCHHHHHHHHHHHHH-TTCEEEEECCGGGTTS------------SS---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHh-cCCeEEEEEeCCchhh------------cC---------------------------
Confidence 4689999999999999999999 9999999997542110 00
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.++....+.++ +.++.||.||.|+|..+.
T Consensus 226 ------~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~v~~v~~~-~~~i~~D~vi~a~G~~p~ 283 (480)
T 3cgb_A 226 ------DGDMAEYIYKEADKHHIEILTNENVKAFKGNERVEAVETD-KGTYKADLVLVSVGVKPN 283 (480)
T ss_dssp ------CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSBEEEEEET-TEEEECSEEEECSCEEES
T ss_pred ------CHHHHHHHHHHHHHcCcEEEcCCEEEEEEcCCcEEEEEEC-CCEEEcCEEEECcCCCcC
Confidence 02345667777788999999 9999999875433345554 458999999999997653
No 216
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.17 E-value=1.2e-05 Score=83.90 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=77.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+.... .
T Consensus 177 ~~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------- 214 (500)
T 1onf_A 177 KKIGIVGSGYIAVELINVIKR-LGIDSYIFARGNRILR------------K----------------------------- 214 (500)
T ss_dssp SEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSSSSCT------------T-----------------------------
T ss_pred CeEEEECChHHHHHHHHHHHH-cCCeEEEEecCCccCc------------c-----------------------------
Confidence 479999999999999999999 9999999997653110 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC-CEEEEEeCCCcE-EEeceEEecCCCCccc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQE-FESSIVCDDGNE-IKASLIVDASGFASSF 229 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~-~~~~v~~~~g~~-i~a~~vI~A~G~~s~v 229 (503)
+ ...+.+.+.+.+++.|++++ +++|++++.++ +.+.|.+.+|++ +.+|.||.|+|..+..
T Consensus 215 ---~-d~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~g~~~~~~D~vi~a~G~~p~~ 277 (500)
T 1onf_A 215 ---F-DESVINVLENDMKKNNINIVTFADVVEIKKVSDKNLSIHLSDGRIYEHFDHVIYCVGRSPDT 277 (500)
T ss_dssp ---S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEESSTTCEEEEETTSCEEEEESEEEECCCBCCTT
T ss_pred ---c-chhhHHHHHHHHHhCCCEEEECCEEEEEEEcCCceEEEEECCCcEEEECCEEEECCCCCcCC
Confidence 0 01234556667778999999 99999998764 347788888987 9999999999987643
No 217
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=98.16 E-value=8.8e-06 Score=84.90 Aligned_cols=97 Identities=13% Similarity=0.204 Sum_probs=77.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccC---CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH---SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~---G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
-.++|||||..|+-+|..|++ . |.+|+++|+.+.... .+
T Consensus 192 ~~vvViGgG~ig~E~A~~l~~-~~~~g~~Vtlv~~~~~~l~------------~~------------------------- 233 (495)
T 2wpf_A 192 RRVLTVGGGFISVEFAGIFNA-YKPPGGKVTLCYRNNLILR------------GF------------------------- 233 (495)
T ss_dssp SEEEEECSSHHHHHHHHHHHH-HCCTTCEEEEEESSSSSCT------------TS-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-hCCCCCeEEEEEcCCcccc------------cc-------------------------
Confidence 479999999999999999999 8 999999997653110 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.+++ .+.|.+.+|+++.+|.||.|+|..+.
T Consensus 234 --------d~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~~~~v~~~~G~~i~~D~vv~a~G~~p~ 293 (495)
T 2wpf_A 234 --------DETIREEVTKQLTANGIEIMTNENPAKVSLNTDGSKHVTFESGKTLDVDVVMMAIGRIPR 293 (495)
T ss_dssp --------CHHHHHHHHHHHHHTTCEEEESCCEEEEEECTTSCEEEEETTSCEEEESEEEECSCEEEC
T ss_pred --------CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCceEEEEECCCcEEEcCEEEECCCCccc
Confidence 01234556667778999999 899999987654 47888889989999999999997654
No 218
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=98.13 E-value=1.6e-05 Score=82.91 Aligned_cols=97 Identities=20% Similarity=0.179 Sum_probs=75.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||||+.|+-+|..|++ .|.+|+++|+.+.... .+
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~~--------------------------- 213 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSR-LGVIVKVFGRSGSVAN------------LQ--------------------------- 213 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHH-TTCEEEEECCTTCCTT------------CC---------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCeEEEEEECCcccc------------cC---------------------------
Confidence 3579999999999999999999 9999999998653210 00
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC--CC--cEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD--DG--NEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~--~g--~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++. ++++ +++|++++.+++.+.+.+. +| .++.+|.||.|+|..+.
T Consensus 214 ------d~~~~~~l~~~l~~~-V~i~~~~~v~~i~~~~~~v~v~~~~~~G~~~~i~~D~Vi~a~G~~p~ 275 (492)
T 3ic9_A 214 ------DEEMKRYAEKTFNEE-FYFDAKARVISTIEKEDAVEVIYFDKSGQKTTESFQYVLAATGRKAN 275 (492)
T ss_dssp ------CHHHHHHHHHHHHTT-SEEETTCEEEEEEECSSSEEEEEECTTCCEEEEEESEEEECSCCEES
T ss_pred ------CHHHHHHHHHHHhhC-cEEEECCEEEEEEEcCCEEEEEEEeCCCceEEEECCEEEEeeCCccC
Confidence 013445555556666 9999 9999999988777777775 67 57999999999998654
No 219
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=98.12 E-value=2.6e-06 Score=92.41 Aligned_cols=38 Identities=24% Similarity=0.415 Sum_probs=34.2
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
...+||+||||||||+.+|..|++ .|++|+|||+.+..
T Consensus 371 ~~~~~vvIIGgG~AGl~aA~~l~~-~g~~V~lie~~~~~ 408 (671)
T 1ps9_A 371 VQKKNLAVVGAGPAGLAFAINAAA-RGHQVTLFDAHSEI 408 (671)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred CCCCeEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCCCC
Confidence 346899999999999999999999 99999999987543
No 220
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=98.11 E-value=1.4e-05 Score=82.72 Aligned_cols=97 Identities=23% Similarity=0.325 Sum_probs=75.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+|+|+.+.... .
T Consensus 172 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------- 209 (464)
T 2a8x_A 172 KSIIIAGAGAIGMEFGYVLKN-YGVDVTIVEFLPRALP------------N----------------------------- 209 (464)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSST------------T-----------------------------
T ss_pred CeEEEECCcHHHHHHHHHHHH-cCCeEEEEEcCCcccc------------c-----------------------------
Confidence 579999999999999999999 9999999998653110 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC-CC--cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD-DG--NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~-~g--~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.+++.+.+.+. +| +++.+|.||.|+|..+.
T Consensus 210 ---~-~~~~~~~l~~~l~~~gv~i~~~~~v~~i~~~~~~~~v~~~~~g~~~~~~~D~vv~a~G~~p~ 272 (464)
T 2a8x_A 210 ---E-DADVSKEIEKQFKKLGVTILTATKVESIADGGSQVTVTVTKDGVAQELKAEKVLQAIGFAPN 272 (464)
T ss_dssp ---S-CHHHHHHHHHHHHHHTCEEECSCEEEEEEECSSCEEEEEESSSCEEEEEESEEEECSCEEEC
T ss_pred ---c-CHHHHHHHHHHHHHcCCEEEeCcEEEEEEEcCCeEEEEEEcCCceEEEEcCEEEECCCCCcc
Confidence 0 01233455666677899999 9999999887666777764 56 57999999999997653
No 221
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=98.10 E-value=1.1e-05 Score=84.04 Aligned_cols=98 Identities=21% Similarity=0.274 Sum_probs=73.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||||+.|+-+|..|++ .|.+|+|+|+.+.... + .
T Consensus 194 ~~~vvVIGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~~l~-~----------~---------------------------- 233 (490)
T 2bc0_A 194 IKRVAVVGAGYIGVELAEAFQR-KGKEVVLIDVVDTCLA-G----------Y---------------------------- 233 (490)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSTTT-T----------T----------------------------
T ss_pred CceEEEECCCHHHHHHHHHHHH-CCCeEEEEEcccchhh-h----------H----------------------------
Confidence 3579999999999999999999 9999999998653110 0 0
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.++....+.+ +|+++.+|.||.|+|..+.
T Consensus 234 ----~-~~~~~~~l~~~l~~~GV~i~~~~~v~~i~~~~~v~~v~~-~g~~i~~D~Vi~a~G~~p~ 292 (490)
T 2bc0_A 234 ----Y-DRDLTDLMAKNMEEHGIQLAFGETVKEVAGNGKVEKIIT-DKNEYDVDMVILAVGFRPN 292 (490)
T ss_dssp ----S-CHHHHHHHHHHHHTTTCEEEETCCEEEEECSSSCCEEEE-SSCEEECSEEEECCCEEEC
T ss_pred ----H-HHHHHHHHHHHHHhCCeEEEeCCEEEEEEcCCcEEEEEE-CCcEEECCEEEECCCCCcC
Confidence 0 02245566677778999999 899999986332223444 6788999999999997653
No 222
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=98.09 E-value=1.5e-05 Score=83.04 Aligned_cols=99 Identities=25% Similarity=0.251 Sum_probs=76.4
Q ss_pred CcEEEECCCHHHHHHHHHHHc---cCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 86 YDVIIIGTGPAGLRLAEQVSS---RHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~---~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
-.|+|||||..|+-+|..|++ +.|.+|+++++.+.... . .+
T Consensus 181 ~~vvViGgG~iG~E~A~~l~~~~~~~g~~V~~v~~~~~~~~---------------------------------~---~l 224 (493)
T 1m6i_A 181 KSITIIGGGFLGSELACALGRKARALGTEVIQLFPEKGNMG---------------------------------K---IL 224 (493)
T ss_dssp SEEEEECCSHHHHHHHHHHHHHHHHHTCEEEEECSSSSTTT---------------------------------T---TS
T ss_pred CeEEEECCCHHHHHHHHHHHhhhhhcCCEEEEEecCccccc---------------------------------c---cC
Confidence 469999999999999999976 13788999986532100 0 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.||+++ +++|++++.+++.+.|.+.+|+++.||.||.|.|..+.
T Consensus 225 --------~~~~~~~~~~~l~~~GV~v~~~~~V~~i~~~~~~~~v~l~dG~~i~aD~Vv~a~G~~pn 283 (493)
T 1m6i_A 225 --------PEYLSNWTMEKVRREGVKVMPNAIVQSVGVSSGKLLIKLKDGRKVETDHIVAAVGLEPN 283 (493)
T ss_dssp --------CHHHHHHHHHHHHTTTCEEECSCCEEEEEEETTEEEEEETTSCEEEESEEEECCCEEEC
T ss_pred --------CHHHHHHHHHHHHhcCCEEEeCCEEEEEEecCCeEEEEECCCCEEECCEEEECCCCCcc
Confidence 02344566677778999999 89999998877777888999999999999999997653
No 223
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=98.06 E-value=2.2e-05 Score=81.48 Aligned_cols=97 Identities=15% Similarity=0.126 Sum_probs=76.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++|+.+.... .
T Consensus 181 ~~v~ViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~----------------------------- 218 (476)
T 3lad_A 181 GKLGVIGAGVIGLELGSVWAR-LGAEVTVLEAMDKFLP------------A----------------------------- 218 (476)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSSSSST------------T-----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCcEEEEecCCCcCc------------c-----------------------------
Confidence 479999999999999999999 9999999997542100 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC---cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG---NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g---~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.+++.+.+.+.++ +++.+|.||.|+|..+.
T Consensus 219 ---~-~~~~~~~l~~~l~~~Gv~v~~~~~v~~i~~~~~~~~v~~~~~~g~~~~~~D~vi~a~G~~p~ 281 (476)
T 3lad_A 219 ---V-DEQVAKEAQKILTKQGLKILLGARVTGTEVKNKQVTVKFVDAEGEKSQAFDKLIVAVGRRPV 281 (476)
T ss_dssp ---S-CHHHHHHHHHHHHHTTEEEEETCEEEEEEECSSCEEEEEESSSEEEEEEESEEEECSCEEEC
T ss_pred ---c-CHHHHHHHHHHHHhCCCEEEECCEEEEEEEcCCEEEEEEEeCCCcEEEECCEEEEeeCCccc
Confidence 0 12245566667778999999 899999998887777777654 57999999999997653
No 224
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=98.05 E-value=3.6e-06 Score=85.88 Aligned_cols=38 Identities=21% Similarity=0.292 Sum_probs=34.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCC-CcEEEEcCCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHS-VKVCCVDPSPLST 122 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G-~~V~viE~~~~~~ 122 (503)
..+||+|||||++||++|+.|++ +| ++|+|+|+++..+
T Consensus 5 ~~~~v~IIGaG~aGl~aA~~L~~-~g~~~v~v~E~~~~~G 43 (424)
T 2b9w_A 5 KDSRIAIIGAGPAGLAAGMYLEQ-AGFHDYTILERTDHVG 43 (424)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHH-TTCCCEEEECSSSCSS
T ss_pred CCCCEEEECcCHHHHHHHHHHHh-CCCCcEEEEECCCCCC
Confidence 46899999999999999999999 99 8999999987653
No 225
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=98.05 E-value=1.9e-05 Score=81.65 Aligned_cols=97 Identities=14% Similarity=0.133 Sum_probs=77.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.++|||||+.|+-+|..|++ .|.+|+++++.+.... .
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~-~g~~Vt~v~~~~~~l~------------~---------------------------- 208 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHG-LGVKTTLIYRGKEILS------------R---------------------------- 208 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSST------------T----------------------------
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCCeEEEEEcCCcccc------------c----------------------------
Confidence 4579999999999999999999 9999999997642110 0
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE-EEEE-eCCCcEEEeceEEecCCCCcc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE-SSIV-CDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~-~~v~-~~~g~~i~a~~vI~A~G~~s~ 228 (503)
. ...+.+.+.+.+++.|++++ +++|++++.++++ +.|. +++|+ +.+|.||.|+|..+.
T Consensus 209 ----~-~~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~g~-i~aD~Vv~a~G~~p~ 269 (463)
T 4dna_A 209 ----F-DQDMRRGLHAAMEEKGIRILCEDIIQSVSADADGRRVATTMKHGE-IVADQVMLALGRMPN 269 (463)
T ss_dssp ----S-CHHHHHHHHHHHHHTTCEEECSCCEEEEEECTTSCEEEEESSSCE-EEESEEEECSCEEES
T ss_pred ----c-CHHHHHHHHHHHHHCCCEEECCCEEEEEEEcCCCEEEEEEcCCCe-EEeCEEEEeeCcccC
Confidence 0 12345667777788999999 8999999987554 6788 88887 999999999998653
No 226
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=98.04 E-value=9.5e-06 Score=81.24 Aligned_cols=91 Identities=24% Similarity=0.332 Sum_probs=71.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-+++|||||+.|+-+|..|++ .|.+|+++|+.+.... ++
T Consensus 144 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~---------------~~------------------------- 182 (367)
T 1xhc_A 144 GEAIIIGGGFIGLELAGNLAE-AGYHVKLIHRGAMFLG---------------LD------------------------- 182 (367)
T ss_dssp SEEEEEECSHHHHHHHHHHHH-TTCEEEEECSSSCCTT---------------CC-------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCCeecc---------------CC-------------------------
Confidence 579999999999999999999 9999999998653110 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
..+.+.+.+.+++.|++++ +++|++++ .+ .|.+++|+ +.+|.||.|+|..+.
T Consensus 183 ------~~~~~~l~~~l~~~gV~i~~~~~v~~i~--~~--~v~~~~g~-i~~D~vi~a~G~~p~ 235 (367)
T 1xhc_A 183 ------EELSNMIKDMLEETGVKFFLNSELLEAN--EE--GVLTNSGF-IEGKVKICAIGIVPN 235 (367)
T ss_dssp ------HHHHHHHHHHHHHTTEEEECSCCEEEEC--SS--EEEETTEE-EECSCEEEECCEEEC
T ss_pred ------HHHHHHHHHHHHHCCCEEEcCCEEEEEE--ee--EEEECCCE-EEcCEEEECcCCCcC
Confidence 1345566677778999999 89999987 23 36677887 999999999997653
No 227
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=98.03 E-value=3.9e-07 Score=94.12 Aligned_cols=99 Identities=17% Similarity=0.283 Sum_probs=63.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHc-c-C----CCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSS-R-H----SVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDH 157 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~-~-~----G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 157 (503)
..+||+||||||||+.+|..|++ . . |++|+|||+.+.. +|.|. .++. ++.
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~~V~lie~~~~~-----gg~~~-----~gv~--------------p~~ 57 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPTP-----WGLVR-----SGVA--------------PDH 57 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSSC-----STHHH-----HTSC--------------TTC
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCCeEEEEecCCCC-----CCccc-----cccC--------------CCC
Confidence 35899999999999999999987 2 1 8999999987532 23331 1110 000
Q ss_pred cccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCC
Q 010693 158 KTKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFA 226 (503)
Q Consensus 158 ~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~ 226 (503)
+ ..+.+...+.+.+.+.|++++ +.+| +. .|.++++ ++.+|.||.|+|..
T Consensus 58 -------~----~~~~~~~~~~~~~~~~~v~~~~~v~v------~~--~v~~~~~-~~~~d~lViAtG~~ 107 (456)
T 1lqt_A 58 -------P----KIKSISKQFEKTAEDPRFRFFGNVVV------GE--HVQPGEL-SERYDAVIYAVGAQ 107 (456)
T ss_dssp -------T----GGGGGHHHHHHHHTSTTEEEEESCCB------TT--TBCHHHH-HHHSSEEEECCCCC
T ss_pred -------C----CHHHHHHHHHHHHhcCCCEEEeeEEE------CC--EEEECCC-eEeCCEEEEeeCCC
Confidence 0 011233445555667889988 5443 11 1334444 47899999999996
No 228
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.03 E-value=1.6e-05 Score=77.94 Aligned_cols=91 Identities=11% Similarity=0.081 Sum_probs=69.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||+|+.|+-+|..|++ .|.+|+++++.+....
T Consensus 173 ~~~v~vvG~G~~g~e~a~~l~~-~g~~v~~v~~~~~~~~----------------------------------------- 210 (338)
T 3itj_A 173 NKPLAVIGGGDSACEEAQFLTK-YGSKVFMLVRKDHLRA----------------------------------------- 210 (338)
T ss_dssp TSEEEEECSSHHHHHHHHHHTT-TSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHh-cCCEEEEEEcCCccCC-----------------------------------------
Confidence 3569999999999999999999 9999999997643110
Q ss_pred CccccCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEE-EEEeCC-----CcEEEeceEEecCCCCc
Q 010693 165 PYGRVSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFES-SIVCDD-----GNEIKASLIVDASGFAS 227 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~~-----g~~i~a~~vI~A~G~~s 227 (503)
...+.+.+.+ .|++++ +++|++++.+++.+ .|.+.+ +.++.+|.||.|+|...
T Consensus 211 ----------~~~~~~~l~~~~gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 271 (338)
T 3itj_A 211 ----------STIMQKRAEKNEKIEILYNTVALEAKGDGKLLNALRIKNTKKNEETDLPVSGLFYAIGHTP 271 (338)
T ss_dssp ----------CHHHHHHHHHCTTEEEECSEEEEEEEESSSSEEEEEEEETTTTEEEEEECSEEEECSCEEE
T ss_pred ----------CHHHHHHHHhcCCeEEeecceeEEEEcccCcEEEEEEEECCCCceEEEEeCEEEEEeCCCC
Confidence 1223344445 499999 99999999877633 355544 35799999999999754
No 229
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.02 E-value=2.2e-05 Score=78.09 Aligned_cols=94 Identities=15% Similarity=0.146 Sum_probs=70.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... . +
T Consensus 164 ~~vvVvG~G~~g~e~A~~l~~-~g~~V~lv~~~~~~~~--------------------------------~--------~ 202 (360)
T 3ab1_A 164 KRVVIVGGGDSALDWTVGLIK-NAASVTLVHRGHEFQG--------------------------------H--------G 202 (360)
T ss_dssp CEEEEECSSHHHHHHHHHTTT-TSSEEEEECSSSSCSS--------------------------------C--------S
T ss_pred CcEEEECCCHHHHHHHHHHHh-cCCEEEEEEcCCCCCC--------------------------------C--------H
Confidence 479999999999999999999 9999999998653100 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEe--CCC--cEEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVC--DDG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~--~~g--~~i~a~~vI~A~G~~s 227 (503)
.+.+.|.+..++.|++++ +++|+++..+++.+ .|.+ .+| .++.+|.||.|+|..+
T Consensus 203 -------~~~~~l~~~~~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~g~~~~i~~D~vi~a~G~~p 263 (360)
T 3ab1_A 203 -------KTAHEVERARANGTIDVYLETEVASIEESNGVLTRVHLRSSDGSKWTVEADRLLILIGFKS 263 (360)
T ss_dssp -------HHHHSSHHHHHHTSEEEESSEEEEEEEEETTEEEEEEEEETTCCEEEEECSEEEECCCBCC
T ss_pred -------HHHHHHHHHhhcCceEEEcCcCHHHhccCCCceEEEEEEecCCCeEEEeCCEEEECCCCCC
Confidence 112334445567899999 89999999876643 3444 477 4799999999999755
No 230
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=98.01 E-value=3.1e-06 Score=88.81 Aligned_cols=40 Identities=25% Similarity=0.331 Sum_probs=36.0
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCC-CcEEEEcCCCCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHS-VKVCCVDPSPLSTW 123 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G-~~V~viE~~~~~~~ 123 (503)
+..+||+|||||+|||+||+.|++ +| ++|+|+|+++..+.
T Consensus 6 ~~~~~VvIIGaG~aGL~AA~~L~~-~G~~~V~VlEa~~riGG 46 (516)
T 1rsg_A 6 PAKKKVIIIGAGIAGLKAASTLHQ-NGIQDCLVLEARDRVGG 46 (516)
T ss_dssp CEEEEEEEECCBHHHHHHHHHHHH-TTCCSEEEECSSSSSBT
T ss_pred CCCCcEEEECCCHHHHHHHHHHHh-cCCCCEEEEeCCCCCCC
Confidence 456899999999999999999999 99 99999999876654
No 231
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.00 E-value=4.8e-06 Score=83.95 Aligned_cols=38 Identities=37% Similarity=0.526 Sum_probs=34.8
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
...+||+|||||++|+++|+.|++ .|.+|+|+|+++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~-~g~~v~v~E~~~~~ 64 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLAS-SGQRVLIVDRRPHI 64 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSS
T ss_pred CCCCCEEEECccHHHHHHHHHHHH-CCCceEEEeccCCC
Confidence 357999999999999999999999 99999999998654
No 232
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=97.99 E-value=5.8e-06 Score=82.69 Aligned_cols=37 Identities=19% Similarity=0.311 Sum_probs=33.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC-CCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS-PLS 121 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~-~~~ 121 (503)
..+||+|||||++||++|+.|++ +|++|+|+|+. +..
T Consensus 43 ~~~~V~IIGAGiaGL~aA~~L~~-~G~~V~VlE~~~~~v 80 (376)
T 2e1m_A 43 PPKRILIVGAGIAGLVAGDLLTR-AGHDVTILEANANRV 80 (376)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-TSCEEEEECSCSSCC
T ss_pred CCceEEEECCCHHHHHHHHHHHH-CCCcEEEEecccccc
Confidence 46899999999999999999999 99999999987 543
No 233
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.99 E-value=9.1e-06 Score=83.92 Aligned_cols=126 Identities=15% Similarity=0.171 Sum_probs=77.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCCCCCCCCcccchh---------HhhhhcCch---hhhhhccCce
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSPLSTWPNNYGVWV---------DEFEDIGLV---DCLDKTWPMT 150 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~~~~~~~~~g~~~---------~~l~~~~~~---~~~~~~~~~~ 150 (503)
.-.|+|||||.+|+=+|..|++ . |.+|++++|.+... +.....+. +.+..+... ..+..
T Consensus 227 ~~~vvVvGgG~sg~e~a~~l~~-~~~~~~Vt~v~r~~~~~-p~~~~~~~~~~~~p~~~~~~~~l~~~~~~~~~~~----- 299 (463)
T 3s5w_A 227 PMKIAIIGGGQSAAEAFIDLND-SYPSVQADMILRASALK-PADDSPFVNEVFAPKFTDLIYSREHAERERLLRE----- 299 (463)
T ss_dssp CEEEEEECCSHHHHHHHHHHHH-HCTTEEEEEECSSSSCC-BCCCCHHHHGGGSHHHHHHHHHSCHHHHHHHHHH-----
T ss_pred CCeEEEECCCHhHHHHHHHHHh-cCCCCeEEEEEeCCCCc-CccCCccchhccChhHHHHHhcCCHHHHHHHHHH-----
Confidence 4579999999999999999999 7 89999999986532 11111111 111111110 00000
Q ss_pred EEEecCCcccccCCCccccCH----HHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEEEEEeC---CCc--EEEeceE
Q 010693 151 CVFINDHKTKYLDRPYGRVSR----NILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFESSIVCD---DGN--EIKASLI 219 (503)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~v~r----~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~--~i~a~~v 219 (503)
.....|..++. ..+.....+.... .|++++ +++|+++..+++.+.|.+. +|+ ++.+|.|
T Consensus 300 ----------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~V 369 (463)
T 3s5w_A 300 ----------YHNTNYSVVDTDLIERIYGVFYRQKVSGIPRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAV 369 (463)
T ss_dssp ----------TGGGTSSCBCHHHHHHHHHHHHHHHHHCCCCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEE
T ss_pred ----------hhccCCCcCCHHHHHHHHHHHHHHHhcCCCCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEE
Confidence 00001111222 2222233333333 689999 9999999988888888876 665 4999999
Q ss_pred EecCCCCc
Q 010693 220 VDASGFAS 227 (503)
Q Consensus 220 I~A~G~~s 227 (503)
|.|+|...
T Consensus 370 v~AtG~~p 377 (463)
T 3s5w_A 370 ILATGYER 377 (463)
T ss_dssp EECCCEEC
T ss_pred EEeeCCCC
Confidence 99999754
No 234
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=97.97 E-value=4.1e-05 Score=75.14 Aligned_cols=95 Identities=12% Similarity=0.146 Sum_probs=71.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||+|..|+-+|..|++ .|.+|+++++.+....
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~-~g~~V~~v~~~~~~~~----------------------------------------- 189 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLD-TARRITLIHRRPQFRA----------------------------------------- 189 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTT-TSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCEEEEECCCHHHHHHHHHHHh-hCCEEEEEEcCCccCc-----------------------------------------
Confidence 3579999999999999999999 9999999998653100
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeC---CC--cEEEeceEEecCCCCc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCD---DG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~---~g--~~i~a~~vI~A~G~~s 227 (503)
...+.+.+.+.+++.|++++ +++|.++..+++...|.+. +| .++.+|.||.|+|..+
T Consensus 190 ------~~~~~~~l~~~l~~~gv~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2zbw_A 190 ------HEASVKELMKAHEEGRLEVLTPYELRRVEGDERVRWAVVFHNQTQEELALEVDAVLILAGYIT 252 (335)
T ss_dssp ------CHHHHHHHHHHHHTTSSEEETTEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ------cHHHHHHHHhccccCCeEEecCCcceeEccCCCeeEEEEEECCCCceEEEecCEEEEeecCCC
Confidence 00112345556677899999 8999999875443345554 66 5799999999999765
No 235
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=97.97 E-value=4.9e-06 Score=84.38 Aligned_cols=37 Identities=30% Similarity=0.630 Sum_probs=34.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccC-CCcEEEEcCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRH-SVKVCCVDPSPLS 121 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~-G~~V~viE~~~~~ 121 (503)
.++||+|||||++||++|+.|++ . |++|+|+|+++..
T Consensus 6 ~~~~v~IiGaG~~Gl~aA~~L~~-~~g~~v~v~E~~~~~ 43 (399)
T 1v0j_A 6 ARFDLFVVGSGFFGLTIAERVAT-QLDKRVLVLERRPHI 43 (399)
T ss_dssp CSCSEEEECCSHHHHHHHHHHHH-HSCCCEEEECSSSSS
T ss_pred ccCCEEEECCCHHHHHHHHHHHH-hCCCCEEEEeCCCCC
Confidence 36999999999999999999999 8 9999999998654
No 236
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=97.97 E-value=9.2e-07 Score=91.44 Aligned_cols=99 Identities=18% Similarity=0.287 Sum_probs=65.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCC--CcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHS--VKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKY 161 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G--~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (503)
..+||+||||||||+.+|..|++ .| ++|+|||+.+.. +|.|.. ++. ++.
T Consensus 5 ~~~~vvIIG~G~aGl~aA~~l~~-~g~~~~V~vie~~~~~-----gg~~~~-----g~~--------------p~~---- 55 (460)
T 1cjc_A 5 QTPQICVVGSGPAGFYTAQHLLK-HHSRAHVDIYEKQLVP-----FGLVRF-----GVA--------------PDH---- 55 (460)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-HCSSCEEEEECSSSSS-----CTHHHH-----TSC--------------TTC----
T ss_pred CCceEEEECcCHHHHHHHHHHHh-cCCCCCEEEEeCCCcC-----Cceeec-----ccC--------------CCC----
Confidence 35899999999999999999999 88 999999987532 233311 110 000
Q ss_pred cCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 162 LDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 162 ~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+ ....+...+.+.+.+.|++++ ++.|. . .|.+.+ .++.+|.||.|+|...
T Consensus 56 ---~----~~~~~~~~~~~~~~~~gv~~~~~~~v~------~--~V~~~~-~~~~~d~lVlAtGs~~ 106 (460)
T 1cjc_A 56 ---P----EVKNVINTFTQTARSDRCAFYGNVEVG------R--DVTVQE-LQDAYHAVVLSYGAED 106 (460)
T ss_dssp ---G----GGGGHHHHHHHHHTSTTEEEEBSCCBT------T--TBCHHH-HHHHSSEEEECCCCCE
T ss_pred ---c----cHHHHHHHHHHHHHhCCcEEEeeeEEe------e--EEEecc-ceEEcCEEEEecCcCC
Confidence 0 011234556666777899998 66551 1 123333 2478999999999874
No 237
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=97.96 E-value=1.1e-06 Score=99.55 Aligned_cols=99 Identities=12% Similarity=0.094 Sum_probs=64.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
..+||+||||||||+++|..|++ .|+ +|+|||+.+..+ ... ..++ +
T Consensus 186 ~~~~VvVIGgGpAGl~aA~~L~~-~G~~~Vtv~E~~~~~G------G~~----~~~i---------------p------- 232 (1025)
T 1gte_A 186 YSAKIALLGAGPASISCASFLAR-LGYSDITIFEKQEYVG------GLS----TSEI---------------P------- 232 (1025)
T ss_dssp GGCCEEEECCSHHHHHHHHHHHH-TTCCCEEEEESSSSCS------THH----HHTS---------------C-------
T ss_pred CCCEEEEECccHHHHHHHHHHHh-cCCCcEEEEeCCCCCC------ccc----cccC---------------C-------
Confidence 46899999999999999999999 999 799999864322 111 0000 0
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCC
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFA 226 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~ 226 (503)
.+. +.. .+.....+.+.+.|++++ ++.+.. . .+.++++.++.+|.||.|+|..
T Consensus 233 --~~~-~~~-~~~~~~~~~~~~~gv~~~~~~~v~~-----~--~v~~~~~~~~~~d~vvlAtGa~ 286 (1025)
T 1gte_A 233 --QFR-LPY-DVVNFEIELMKDLGVKIICGKSLSE-----N--EITLNTLKEEGYKAAFIGIGLP 286 (1025)
T ss_dssp --TTT-SCH-HHHHHHHHHHHTTTCEEEESCCBST-----T--SBCHHHHHHTTCCEEEECCCCC
T ss_pred --ccc-CCH-HHHHHHHHHHHHCCcEEEcccEecc-----c--eEEhhhcCccCCCEEEEecCCC
Confidence 000 111 123334556677899998 655521 1 1333444457899999999984
No 238
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=97.96 E-value=5.9e-06 Score=86.01 Aligned_cols=52 Identities=10% Similarity=0.005 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC---cEEEeceEEecCCCC
Q 010693 173 ILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG---NEIKASLIVDASGFA 226 (503)
Q Consensus 173 ~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g---~~i~a~~vI~A~G~~ 226 (503)
.+.+.|.+.+.+ .+++ +++|++|..+++++.|++.+| ++++||.||.|.+..
T Consensus 240 ~l~~~l~~~l~~--~~i~~~~~V~~i~~~~~~v~v~~~~g~~~~~~~ad~vI~a~p~~ 295 (489)
T 2jae_A 240 RIYYAFQDRIGT--DNIVFGAEVTSMKNVSEGVTVEYTAGGSKKSITADYAICTIPPH 295 (489)
T ss_dssp HHHHHHHHHHCG--GGEETTCEEEEEEEETTEEEEEEEETTEEEEEEESEEEECSCHH
T ss_pred HHHHHHHHhcCC--CeEEECCEEEEEEEcCCeEEEEEecCCeEEEEECCEEEECCCHH
Confidence 345555554422 6788 999999999999999988876 579999999999764
No 239
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=97.95 E-value=4.4e-05 Score=75.99 Aligned_cols=104 Identities=13% Similarity=0.223 Sum_probs=73.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|++|+-+|..|++ .|.+|+++++.+....+. ++.. . .
T Consensus 167 ~~vvVvG~G~~g~e~a~~l~~-~g~~V~lv~~~~~~~~~~----------------------------~d~~----~--~ 211 (369)
T 3d1c_A 167 GQYVVIGGNESGFDAAYQLAK-NGSDIALYTSTTGLNDPD----------------------------ADPS----V--R 211 (369)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECC--------------------------------------CT----T--S
T ss_pred CEEEEECCCcCHHHHHHHHHh-cCCeEEEEecCCCCCCCC----------------------------CCCC----c--c
Confidence 379999999999999999999 999999999764311100 0000 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCC-cEEE-EeEEEEEEEeCCEEEEEeCCCcEEE-eceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNG-VKFH-KAKVWHVNHQEFESSIVCDDGNEIK-ASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~g-v~~~-~~~v~~i~~~~~~~~v~~~~g~~i~-a~~vI~A~G~~s~ 228 (503)
+ ...+.+.+.+.+++.| ++++ +++|.+++.+++.+.|.+.+|+++. +|.||.|+|....
T Consensus 212 ---~-~~~~~~~l~~~l~~~g~v~~~~~~~v~~i~~~~~~~~v~~~~g~~~~~~d~vi~a~G~~~~ 273 (369)
T 3d1c_A 212 ---L-SPYTRQRLGNVIKQGARIEMNVHYTVKDIDFNNGQYHISFDSGQSVHTPHEPILATGFDAT 273 (369)
T ss_dssp ---C-CHHHHHHHHHHHHTTCCEEEECSCCEEEEEEETTEEEEEESSSCCEEESSCCEECCCBCGG
T ss_pred ---C-CHHHHHHHHHHHhhCCcEEEecCcEEEEEEecCCceEEEecCCeEeccCCceEEeeccCCc
Confidence 0 1223455556666786 9999 8999999877777788888887665 5999999998663
No 240
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.95 E-value=6.4e-05 Score=72.88 Aligned_cols=90 Identities=14% Similarity=0.137 Sum_probs=67.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... .
T Consensus 144 ~~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~~~----------------~------------------------- 181 (311)
T 2q0l_A 144 KEVAVLGGGDTAVEEAIYLAN-ICKKVYLIHRRDGFRC----------------A------------------------- 181 (311)
T ss_dssp SEEEEECCSHHHHHHHHHHHT-TSSEEEEECSSSSCCS----------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCEEEEEeeCCccCC----------------C-------------------------
Confidence 579999999999999999999 9999999997642110 0
Q ss_pred ccccCHHHHHHHHHHHHH-hCCcEEE-EeEEEEEEEeCCEE-EEEeC---CCc--EEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCV-SNGVKFH-KAKVWHVNHQEFES-SIVCD---DGN--EIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~-~~gv~~~-~~~v~~i~~~~~~~-~v~~~---~g~--~i~a~~vI~A~G~~s 227 (503)
..+.+.+. +.|++++ +++++++..+++.+ .|.+. +|+ ++.+|.||.|+|..+
T Consensus 182 ----------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 241 (311)
T 2q0l_A 182 ----------PITLEHAKNNDKIEFLTPYVVEEIKGDASGVSSLSIKNTATNEKRELVVPGFFIFVGYDV 241 (311)
T ss_dssp ----------HHHHHHHHTCTTEEEETTEEEEEEEEETTEEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred ----------HHHHHHHhhCCCeEEEeCCEEEEEECCCCcEeEEEEEecCCCceEEEecCEEEEEecCcc
Confidence 01223333 3799999 99999998875543 44544 565 799999999999754
No 241
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=97.91 E-value=5.1e-05 Score=78.82 Aligned_cols=96 Identities=15% Similarity=0.118 Sum_probs=73.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||..|+-+|..|++ .|.+|+++++.... ..+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~l-------------~~~---------------------------- 225 (483)
T 3dgh_A 188 GKTLVVGAGYIGLECAGFLKG-LGYEPTVMVRSIVL-------------RGF---------------------------- 225 (483)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSCSS-------------TTS----------------------------
T ss_pred CcEEEECCCHHHHHHHHHHHH-cCCEEEEEeCCCCC-------------ccc----------------------------
Confidence 469999999999999999999 99999999963210 000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEEEEeCCCc-----EEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESSIVCDDGN-----EIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~~g~-----~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.+++ .+.|.+.++. ++.+|.||.|+|....
T Consensus 226 -----d~~~~~~l~~~l~~~Gv~i~~~~~v~~i~~~~~~~~~v~~~~~~~~~~~~~~~D~vi~a~G~~p~ 290 (483)
T 3dgh_A 226 -----DQQMAELVAASMEERGIPFLRKTVPLSVEKQDDGKLLVKYKNVETGEESEDVYDTVLWAIGRKGL 290 (483)
T ss_dssp -----CHHHHHHHHHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEETTTCCEEEEEESEEEECSCEEEC
T ss_pred -----CHHHHHHHHHHHHhCCCEEEeCCEEEEEEEcCCCcEEEEEecCCCCceeEEEcCEEEECcccccC
Confidence 01244566677778999999 899999987644 4667766543 7999999999997653
No 242
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=97.90 E-value=7e-06 Score=82.20 Aligned_cols=36 Identities=28% Similarity=0.396 Sum_probs=33.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
++||+|||||++|+++|+.|++ .|++|+|+|+++..
T Consensus 1 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~ 36 (367)
T 1i8t_A 1 MYDYIIVGSGLFGAVCANELKK-LNKKVLVIEKRNHI 36 (367)
T ss_dssp CEEEEEECCSHHHHHHHHHHGG-GTCCEEEECSSSSS
T ss_pred CCCEEEECcCHHHHHHHHHHHh-CCCcEEEEecCCCC
Confidence 3799999999999999999999 99999999997654
No 243
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.90 E-value=6.6e-05 Score=77.85 Aligned_cols=97 Identities=16% Similarity=0.096 Sum_probs=74.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||..|+-+|..|++ .|.+|+++++.+.... .+
T Consensus 188 ~~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~~~l~------------~~---------------------------- 226 (478)
T 3dk9_A 188 GRSVIVGAGYIAVEMAGILSA-LGSKTSLMIRHDKVLR------------SF---------------------------- 226 (478)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSCT------------TS----------------------------
T ss_pred ccEEEECCCHHHHHHHHHHHH-cCCeEEEEEeCCcccc------------cc----------------------------
Confidence 579999999999999999999 9999999997643110 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCE--EEEEeCC---C----cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFE--SSIVCDD---G----NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~--~~v~~~~---g----~~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++|++++.++++ +.+.+.+ | .++.+|.||.|+|....
T Consensus 227 -----d~~~~~~~~~~l~~~gv~i~~~~~v~~i~~~~~~~~~~v~~~~~~~g~~~g~~~~~D~vi~a~G~~p~ 294 (478)
T 3dk9_A 227 -----DSMISTNCTEELENAGVEVLKFSQVKEVKKTLSGLEVSMVTAVPGRLPVMTMIPDVDCLLWAIGRVPN 294 (478)
T ss_dssp -----CHHHHHHHHHHHHHTTCEEETTEEEEEEEECSSSEEEEEEECCTTSCCEEEEEEEESEEEECSCEEES
T ss_pred -----CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEccCCCCcccceEEEcCEEEEeeccccC
Confidence 01234556666778999999 9999999876544 6677765 2 57999999999997653
No 244
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.90 E-value=6e-05 Score=73.50 Aligned_cols=90 Identities=16% Similarity=0.173 Sum_probs=67.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... .
T Consensus 156 ~~v~viG~G~~g~e~a~~l~~-~g~~V~~i~~~~~~~~----------------~------------------------- 193 (319)
T 3cty_A 156 KRVVTIGGGNSGAIAAISMSE-YVKNVTIIEYMPKYMC----------------E------------------------- 193 (319)
T ss_dssp SEEEEECCSHHHHHHHHHHTT-TBSEEEEECSSSSCCS----------------C-------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHh-hCCcEEEEEcCCccCC----------------C-------------------------
Confidence 479999999999999999999 9999999997542100 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC-EEEEEeC---CCc--EEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF-ESSIVCD---DGN--EIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~-~~~v~~~---~g~--~i~a~~vI~A~G~~s 227 (503)
..+.+.+.+.|++++ +++|+++..+++ ...|.+. +|+ ++.+|.||.|+|..+
T Consensus 194 ----------~~l~~~l~~~gv~i~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (319)
T 3cty_A 194 ----------NAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIP 252 (319)
T ss_dssp ----------HHHHHHHHHTTCCEECSEEEEEEEESSSSEEEEEEEETTTCCEEEECCSEEEECCCEEE
T ss_pred ----------HHHHHHHhcCCcEEEcCCeEEEEecCCceEEEEEEEEcCCCceEEEecCEEEEeeCCcc
Confidence 113334457899999 999999987655 2234443 565 699999999998755
No 245
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=97.87 E-value=7.2e-05 Score=78.58 Aligned_cols=98 Identities=12% Similarity=0.051 Sum_probs=79.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||..|+=.|..+++ .|.+|+|+++.... ..
T Consensus 224 ~~lvIIGgG~IGlE~A~~~~~-lG~~VTii~~~~~L-------------~~----------------------------- 260 (542)
T 4b1b_A 224 GKTLVVGASYVALECSGFLNS-LGYDVTVAVRSIVL-------------RG----------------------------- 260 (542)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-HTCCEEEEESSCSS-------------TT-----------------------------
T ss_pred ceEEEECCCHHHHHHHHHHHh-cCCeEEEecccccc-------------cc-----------------------------
Confidence 469999999999999999999 99999999863210 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcccc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASSFV 230 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~vr 230 (503)
.+ ..+.+.+.+.+++.|++++ ++.++.++..++.+.|.+.++.++.+|.|+.|.|+...+.
T Consensus 261 ---~D-~ei~~~l~~~l~~~gi~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~D~vLvAvGR~Pnt~ 322 (542)
T 4b1b_A 261 ---FD-QQCAVKVKLYMEEQGVMFKNGILPKKLTKMDDKILVEFSDKTSELYDTVLYAIGRKGDID 322 (542)
T ss_dssp ---SC-HHHHHHHHHHHHHTTCEEEETCCEEEEEEETTEEEEEETTSCEEEESEEEECSCEEESCG
T ss_pred ---cc-hhHHHHHHHHHHhhcceeecceEEEEEEecCCeEEEEEcCCCeEEEEEEEEcccccCCcc
Confidence 01 1234566667778999999 8999999999999999999999999999999999877553
No 246
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.86 E-value=0.0001 Score=72.00 Aligned_cols=90 Identities=14% Similarity=0.150 Sum_probs=67.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... .
T Consensus 153 ~~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~~~----------------~------------------------- 190 (325)
T 2q7v_A 153 KKVVVIGGGDAAVEEGMFLTK-FADEVTVIHRRDTLRA----------------N------------------------- 190 (325)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-TCSEEEEECSSSSCCS----------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHh-cCCEEEEEeCCCcCCc----------------c-------------------------
Confidence 479999999999999999999 9999999997642110 0
Q ss_pred ccccCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEEEEEeC---CCc--EEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFESSIVCD---DGN--EIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v~~~---~g~--~i~a~~vI~A~G~~s 227 (503)
..+.+++.+ .|++++ +++|+++..++....|.+. +|+ ++.+|.||.|+|..+
T Consensus 191 ----------~~~~~~l~~~~gv~i~~~~~v~~i~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 249 (325)
T 2q7v_A 191 ----------KVAQARAFANPKMKFIWDTAVEEIQGADSVSGVKLRNLKTGEVSELATDGVFIFIGHVP 249 (325)
T ss_dssp ----------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred ----------hHHHHHHHhcCCceEecCCceEEEccCCcEEEEEEEECCCCcEEEEEcCEEEEccCCCC
Confidence 012233333 699999 9999999875443345543 565 799999999998755
No 247
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=97.86 E-value=1e-05 Score=84.42 Aligned_cols=38 Identities=24% Similarity=0.349 Sum_probs=34.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
..+||+|||||++||++|+.|++ +|++|+|+|+.+..+
T Consensus 12 ~~~~v~iiG~G~~Gl~aA~~l~~-~g~~v~v~E~~~~~G 49 (504)
T 1sez_A 12 SAKRVAVIGAGVSGLAAAYKLKI-HGLNVTVFEAEGKAG 49 (504)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHT-TSCEEEEECSSSSSC
T ss_pred CCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEeCCCCC
Confidence 35899999999999999999999 999999999987754
No 248
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.86 E-value=6.5e-05 Score=72.81 Aligned_cols=90 Identities=19% Similarity=0.202 Sum_probs=67.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... +
T Consensus 145 ~~v~VvG~G~~g~e~A~~l~~-~g~~Vtlv~~~~~~~~----------------~------------------------- 182 (310)
T 1fl2_A 145 KRVAVIGGGNSGVEAAIDLAG-IVEHVTLLEFAPEMKA----------------D------------------------- 182 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TBSEEEEECSSSSCCS----------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH-hCCEEEEEEeCcccCc----------------c-------------------------
Confidence 479999999999999999999 9999999997653200 0
Q ss_pred ccccCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEE-EEEeC---CCc--EEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFES-SIVCD---DGN--EIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~---~g~--~i~a~~vI~A~G~~s 227 (503)
+.+.+.+.+ .|++++ +++++++..+++.+ .|.+. +|+ ++.+|.||.|+|..+
T Consensus 183 ----------~~~~~~l~~~~gv~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 242 (310)
T 1fl2_A 183 ----------QVLQDKLRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHNIELAGIFVQIGLLP 242 (310)
T ss_dssp ----------HHHHHHHHTCTTEEEESSEEEEEEEESSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred ----------HHHHHHHhhCCCeEEecCCceEEEEcCCCcEEEEEEEECCCCcEEEEEcCEEEEeeCCcc
Confidence 123334445 699999 99999998765543 34443 353 689999999998754
No 249
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.85 E-value=1.3e-05 Score=82.75 Aligned_cols=99 Identities=22% Similarity=0.324 Sum_probs=64.3
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCccccc
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYL 162 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (503)
...+||+||||||||+++|..|++ .|++|+|||+.+..+ |.+. .++ +.
T Consensus 120 ~~~~~V~IIGgGpAGl~aA~~L~~-~G~~V~v~e~~~~~G-----G~l~-----~gi---------------p~------ 167 (456)
T 2vdc_G 120 ELGLSVGVIGAGPAGLAAAEELRA-KGYEVHVYDRYDRMG-----GLLV-----YGI---------------PG------ 167 (456)
T ss_dssp SCCCCEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSSCS-----THHH-----HTS---------------CT------
T ss_pred CCCCEEEEECCCHHHHHHHHHHHH-CCCeEEEEeccCCCC-----Ceee-----ecC---------------CC------
Confidence 356899999999999999999999 999999999865422 1110 010 00
Q ss_pred CCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 163 DRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 163 ~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+ .+. +.+.....+.+.+.|++++ ++.|. . .+.++++ .+.+|.||.|+|...
T Consensus 168 ---~-~~~-~~~~~~~~~~l~~~gv~~~~~~~v~------~--~v~~~~~-~~~~d~vvlAtG~~~ 219 (456)
T 2vdc_G 168 ---F-KLE-KSVVERRVKLLADAGVIYHPNFEVG------R--DASLPEL-RRKHVAVLVATGVYK 219 (456)
T ss_dssp ---T-TSC-HHHHHHHHHHHHHTTCEEETTCCBT------T--TBCHHHH-HSSCSEEEECCCCCE
T ss_pred ---c-cCC-HHHHHHHHHHHHHCCcEEEeCCEec------c--EEEhhHh-HhhCCEEEEecCCCC
Confidence 0 111 2233445566677899998 66552 0 1222222 256999999999863
No 250
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=97.85 E-value=1.2e-05 Score=81.10 Aligned_cols=36 Identities=19% Similarity=0.369 Sum_probs=33.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
++||+|||||++|+++|..|++ .|++|+|+|+++..
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~-~g~~v~v~E~~~~~ 38 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAE-KGHQVHIIDQRDHI 38 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TTCEEEEEESSSSS
T ss_pred cCCEEEECcCHHHHHHHHHHHH-CCCcEEEEEecCCc
Confidence 5899999999999999999999 99999999998654
No 251
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=97.80 E-value=1.1e-05 Score=84.69 Aligned_cols=38 Identities=26% Similarity=0.425 Sum_probs=33.1
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..+||+||||+|+||+.+|..|+++.|++|+|||+++.
T Consensus 15 ~~~yD~IIVGsG~aG~v~A~rLse~~~~~VLvLEaG~~ 52 (526)
T 3t37_A 15 APNCDIVIVGGGSAGSLLAARLSEDPDSRVLLIEAGEE 52 (526)
T ss_dssp --CEEEEEECCSHHHHHHHHHHTTSTTSCEEEECSSBC
T ss_pred CCCeeEEEECccHHHHHHHHHHHhCCCCeEEEEcCCCC
Confidence 34799999999999999999999746799999999864
No 252
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.80 E-value=2.9e-05 Score=74.61 Aligned_cols=86 Identities=10% Similarity=0.174 Sum_probs=67.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||+|+.|+-+|..|++ .| +|+++++.+. .
T Consensus 141 ~~~v~vvG~G~~~~e~a~~l~~-~g-~v~~v~~~~~-----------------~-------------------------- 175 (297)
T 3fbs_A 141 QGKIGVIAASPMAIHHALMLPD-WG-ETTFFTNGIV-----------------E-------------------------- 175 (297)
T ss_dssp TCEEEEECCSTTHHHHHHHGGG-TS-EEEEECTTTC-----------------C--------------------------
T ss_pred CCEEEEEecCccHHHHHHHhhh-cC-cEEEEECCCC-----------------C--------------------------
Confidence 3579999999999999999999 89 9999986532 0
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+.+.+.+.+.+.|++++.++|+++..++ .|.+.+|+++.+|.||.|+|...
T Consensus 176 ---------~~~~~~~~l~~~gv~i~~~~v~~i~~~~---~v~~~~g~~~~~D~vi~a~G~~p 226 (297)
T 3fbs_A 176 ---------PDADQHALLAARGVRVETTRIREIAGHA---DVVLADGRSIALAGLFTQPKLRI 226 (297)
T ss_dssp ---------CCHHHHHHHHHTTCEEECSCEEEEETTE---EEEETTSCEEEESEEEECCEEEC
T ss_pred ---------CCHHHHHHHHHCCcEEEcceeeeeecCC---eEEeCCCCEEEEEEEEEccCccc
Confidence 0112234556789999977888886432 67888999999999999998754
No 253
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=97.78 E-value=1.6e-05 Score=84.07 Aligned_cols=37 Identities=32% Similarity=0.546 Sum_probs=33.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
+..||+||||+|++|+.+|..|++ .|++|+|||+++.
T Consensus 5 ~~~~D~iIvG~G~aG~~~A~~L~~-~g~~VlvlE~g~~ 41 (546)
T 1kdg_A 5 ATPYDYIIVGAGPGGIIAADRLSE-AGKKVLLLERGGP 41 (546)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCC
T ss_pred CCceeEEEECcCHHHHHHHHHHHh-CCCeEEEEeCCCC
Confidence 457999999999999999999999 9999999999864
No 254
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.77 E-value=0.00016 Score=69.89 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=67.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... .
T Consensus 148 ~~v~viG~g~~~~e~a~~l~~-~g~~v~~~~~~~~~~~----------------~------------------------- 185 (315)
T 3r9u_A 148 KEVAVLGGGDTALEEALYLAN-ICSKIYLIHRRDEFRA----------------A------------------------- 185 (315)
T ss_dssp SEEEEECCBHHHHHHHHHHHT-TSSEEEEECSSSSCBS----------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHh-hCCEEEEEEeCCCCCC----------------C-------------------------
Confidence 579999999999999999999 9999999997643100 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEE-EEEe--CCCc--EEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFES-SIVC--DDGN--EIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~-~v~~--~~g~--~i~a~~vI~A~G~~s 227 (503)
. ..+.+..++.|++++ +++|.++..+++.+ .|++ .+|+ ++.+|.||.|+|...
T Consensus 186 -----~----~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~g~~~~~~~D~vv~a~G~~p 244 (315)
T 3r9u_A 186 -----P----STVEKVKKNEKIELITSASVDEVYGDKMGVAGVKVKLKDGSIRDLNVPGIFTFVGLNV 244 (315)
T ss_dssp -----H----HHHHHHHHCTTEEEECSCEEEEEEEETTEEEEEEEECTTSCEEEECCSCEEECSCEEE
T ss_pred -----H----HHHHHHHhcCCeEEEeCcEEEEEEcCCCcEEEEEEEcCCCCeEEeecCeEEEEEcCCC
Confidence 0 111122246899999 99999998877532 2444 3775 799999999999754
No 255
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=97.77 E-value=1.9e-05 Score=82.18 Aligned_cols=38 Identities=21% Similarity=0.334 Sum_probs=34.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCC-CcEEEEcCCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHS-VKVCCVDPSPLS 121 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G-~~V~viE~~~~~ 121 (503)
+..+||+|||||++||++|+.|++ +| .+|+|+|+.+..
T Consensus 7 ~~~~~v~iiG~G~~Gl~~A~~l~~-~g~~~v~v~E~~~~~ 45 (484)
T 4dsg_A 7 LLTPKIVIIGAGPTGLGAAVRLTE-LGYKNWHLYECNDTP 45 (484)
T ss_dssp CCSCCEEEECCSHHHHHHHHHHHH-TTCCSEEEEESSSSS
T ss_pred ccCCCEEEECcCHHHHHHHHHHHH-cCCCCEEEEeCCCCC
Confidence 346899999999999999999999 98 799999998654
No 256
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=97.76 E-value=0.00013 Score=75.76 Aligned_cols=96 Identities=14% Similarity=0.149 Sum_probs=72.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||+.|+-+|..|++ .|.+|+++++.+.. ..+
T Consensus 186 ~~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~l-------------~~~---------------------------- 223 (488)
T 3dgz_A 186 GKTLVVGASYVALECAGFLTG-IGLDTTVMMRSIPL-------------RGF---------------------------- 223 (488)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCSS-------------TTS----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCceEEEEcCccc-------------ccC----------------------------
Confidence 369999999999999999999 99999999964210 000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe-CCEEEEEeCC---Cc--EEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ-EFESSIVCDD---GN--EIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~~~v~~~~---g~--~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ ++++.++... ++.+.+.+.+ |+ ++.+|.||.|+|....
T Consensus 224 -----d~~~~~~l~~~l~~~gv~~~~~~~v~~i~~~~~~~~~v~~~~~~~g~~~~~~~D~vi~a~G~~p~ 288 (488)
T 3dgz_A 224 -----DQQMSSLVTEHMESHGTQFLKGCVPSHIKKLPTNQLQVTWEDHASGKEDTGTFDTVLWAIGRVPE 288 (488)
T ss_dssp -----CHHHHHHHHHHHHHTTCEEEETEEEEEEEECTTSCEEEEEEETTTTEEEEEEESEEEECSCEEES
T ss_pred -----CHHHHHHHHHHHHHCCCEEEeCCEEEEEEEcCCCcEEEEEEeCCCCeeEEEECCEEEEcccCCcc
Confidence 01244566677778999999 8999999874 3456666544 54 4899999999997653
No 257
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=97.74 E-value=2e-05 Score=82.14 Aligned_cols=38 Identities=26% Similarity=0.337 Sum_probs=34.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
..+||+|||||++||++|+.|++ .|++|+|+|+.+..+
T Consensus 32 ~~~~v~IiGaG~~Gl~aA~~l~~-~g~~v~vlE~~~~~g 69 (498)
T 2iid_A 32 NPKHVVIVGAGMAGLSAAYVLAG-AGHQVTVLEASERPG 69 (498)
T ss_dssp SCCEEEEECCBHHHHHHHHHHHH-HTCEEEEECSSSSSB
T ss_pred CCCCEEEECCCHHHHHHHHHHHh-CCCeEEEEECCCCCC
Confidence 35899999999999999999999 999999999987654
No 258
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.74 E-value=0.00014 Score=75.08 Aligned_cols=95 Identities=21% Similarity=0.255 Sum_probs=70.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||+.|+-+|..|++ .|.+|+++++.+.... ..
T Consensus 173 ~~vvViGgG~~g~e~A~~l~~-~g~~Vtlv~~~~~~l~------------~~---------------------------- 211 (466)
T 3l8k_A 173 QDMVIIGAGYIGLEIASIFRL-MGVQTHIIEMLDRALI------------TL---------------------------- 211 (466)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSCT------------TS----------------------------
T ss_pred CeEEEECCCHHHHHHHHHHHH-cCCEEEEEEeCCcCCC------------CC----------------------------
Confidence 579999999999999999999 9999999997652110 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC-CEEEEEeC--CCc--EEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQE-FESSIVCD--DGN--EIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~-~~~~v~~~--~g~--~i~a~~vI~A~G~~s~ 228 (503)
++ ..+.+.+.+... ++++ +++|++++.++ +.+.|.+. +|+ ++.+|.||.|+|..+.
T Consensus 212 ---~d-~~~~~~l~~~l~---v~i~~~~~v~~i~~~~~~~v~v~~~~~~G~~~~i~~D~vi~a~G~~p~ 273 (466)
T 3l8k_A 212 ---ED-QDIVNTLLSILK---LNIKFNSPVTEVKKIKDDEYEVIYSTKDGSKKSIFTNSVVLAAGRRPV 273 (466)
T ss_dssp ---CC-HHHHHHHHHHHC---CCEECSCCEEEEEEEETTEEEEEECCTTSCCEEEEESCEEECCCEEEC
T ss_pred ---CC-HHHHHHHHhcCE---EEEEECCEEEEEEEcCCCcEEEEEEecCCceEEEEcCEEEECcCCCcc
Confidence 00 112233333332 8999 89999998877 78888887 676 7999999999997653
No 259
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=97.74 E-value=2e-05 Score=84.53 Aligned_cols=38 Identities=34% Similarity=0.671 Sum_probs=34.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
..|||+|||||++|+++|+.|++ +|++|+|||+.+..+
T Consensus 45 ~~~dvvIIG~G~aGl~aA~~l~~-~G~~V~liE~~~~~g 82 (623)
T 3pl8_A 45 IKYDVVIVGSGPIGCTYARELVG-AGYKVAMFDIGEIDS 82 (623)
T ss_dssp -CEEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCCCS
T ss_pred ccCCEEEECCcHHHHHHHHHHHh-CCCcEEEEeccCCCC
Confidence 46999999999999999999999 999999999987654
No 260
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=97.73 E-value=0.00014 Score=70.67 Aligned_cols=90 Identities=23% Similarity=0.278 Sum_probs=68.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... .
T Consensus 155 ~~v~vvG~G~~~~e~a~~l~~-~g~~v~~~~~~~~~~~----------------~------------------------- 192 (323)
T 3f8d_A 155 RVVAVIGGGDSALEGAEILSS-YSTKVYLIHRRDTFKA----------------Q------------------------- 192 (323)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HSSEEEEECSSSSCCS----------------C-------------------------
T ss_pred CEEEEECCCHHHHHHHHHHHH-hCCeEEEEEeCCCCCc----------------C-------------------------
Confidence 579999999999999999999 9999999997642110 0
Q ss_pred ccccCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEEEEEeCC---Cc--EEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFESSIVCDD---GN--EIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~~v~~~~---g~--~i~a~~vI~A~G~~s 227 (503)
..+.+.+.+ .|++++ +++|+++..++....|.+.+ |+ ++.+|.||.|.|..+
T Consensus 193 ----------~~~~~~~~~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 251 (323)
T 3f8d_A 193 ----------PIYVETVKKKPNVEFVLNSVVKEIKGDKVVKQVVVENLKTGEIKELNVNGVFIEIGFDP 251 (323)
T ss_dssp ----------HHHHHHHHTCTTEEEECSEEEEEEEESSSEEEEEEEETTTCCEEEEECSEEEECCCEEC
T ss_pred ----------HHHHHHHHhCCCcEEEeCCEEEEEeccCceeEEEEEECCCCceEEEEcCEEEEEECCCC
Confidence 012233333 599999 89999998876555566654 66 799999999999755
No 261
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=97.72 E-value=7.3e-05 Score=76.60 Aligned_cols=92 Identities=14% Similarity=0.261 Sum_probs=70.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.++|||||+.|+-+|..+++ .|.+|+|+|+.+.... .. +..
T Consensus 148 ~~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~ll~------------~~-------------------------d~~ 189 (437)
T 4eqs_A 148 DKVLVVGAGYVSLEVLENLYE-RGLHPTLIHRSDKINK------------LM-------------------------DAD 189 (437)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCEEEEEESSSCCST------------TS-------------------------CGG
T ss_pred cEEEEECCccchhhhHHHHHh-cCCcceeeeeeccccc------------cc-------------------------cch
Confidence 479999999999999999999 9999999997643110 00 000
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+.+.+.+..++.|++++ +++|++++. + .+.+.+|+++.+|.||.|.|...
T Consensus 190 --------~~~~~~~~l~~~gV~i~~~~~v~~~~~--~--~v~~~~g~~~~~D~vl~a~G~~P 240 (437)
T 4eqs_A 190 --------MNQPILDELDKREIPYRLNEEINAING--N--EITFKSGKVEHYDMIIEGVGTHP 240 (437)
T ss_dssp --------GGHHHHHHHHHTTCCEEESCCEEEEET--T--EEEETTSCEEECSEEEECCCEEE
T ss_pred --------hHHHHHHHhhccceEEEeccEEEEecC--C--eeeecCCeEEeeeeEEEEeceec
Confidence 12345556667899999 899988763 2 46788999999999999999755
No 262
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.65 E-value=9.6e-05 Score=72.15 Aligned_cols=91 Identities=14% Similarity=0.108 Sum_probs=68.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... ...
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~-~~~~v~~~~~~~~~~~---------------~~~----------------------- 194 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEP-IAKEVSIIHRRDKFRA---------------HEH----------------------- 194 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTT-TBSEEEEECSSSSCSS---------------CHH-----------------------
T ss_pred CCEEEEECCCHhHHHHHHHHHh-hCCeEEEEEecCcCCc---------------cHH-----------------------
Confidence 3579999999999999999999 9999999997643100 000
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCC-----CcEEEeceEEecCCCCc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDD-----GNEIKASLIVDASGFAS 227 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~-----g~~i~a~~vI~A~G~~s 227 (503)
..+.+.+.|++++ +++|.++..+++...|.+.+ +.++.+|.||.|+|..+
T Consensus 195 -------------~~~~l~~~gv~~~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~~~~D~vv~a~G~~p 250 (332)
T 3lzw_A 195 -------------SVENLHASKVNVLTPFVPAELIGEDKIEQLVLEEVKGDRKEILEIDDLIVNYGFVS 250 (332)
T ss_dssp -------------HHHHHHHSSCEEETTEEEEEEECSSSCCEEEEEETTSCCEEEEECSEEEECCCEEC
T ss_pred -------------HHHHHhcCCeEEEeCceeeEEecCCceEEEEEEecCCCceEEEECCEEEEeeccCC
Confidence 0122456899999 89999998776654555544 34799999999999654
No 263
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.64 E-value=0.0003 Score=68.77 Aligned_cols=91 Identities=13% Similarity=0.122 Sum_probs=67.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
.-.|+|||+|..|+-+|..|++ .|.+|+++++.+....
T Consensus 159 ~~~v~VvG~G~~g~e~A~~l~~-~g~~V~lv~~~~~~~~----------------------------------------- 196 (333)
T 1vdc_A 159 NKPLAVIGGGDSAMEEANFLTK-YGSKVYIIHRRDAFRA----------------------------------------- 196 (333)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT-TSSEEEEECSSSSCCS-----------------------------------------
T ss_pred CCeEEEECCChHHHHHHHHHHh-cCCeEEEEecCCcCCc-----------------------------------------
Confidence 3579999999999999999999 9999999998653210
Q ss_pred CccccCHHHHHHHHHHH-HHhCCcEEE-EeEEEEEEEeCC--EE-EEEeC---CC--cEEEeceEEecCCCCc
Q 010693 165 PYGRVSRNILKTKLLEN-CVSNGVKFH-KAKVWHVNHQEF--ES-SIVCD---DG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~-~~~~gv~~~-~~~v~~i~~~~~--~~-~v~~~---~g--~~i~a~~vI~A~G~~s 227 (503)
. ..+.++ .++.|++++ +++|+++..+++ .+ .|.+. +| .++.+|.||.|+|...
T Consensus 197 ------~----~~~~~~~~~~~gv~i~~~~~v~~i~~~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 259 (333)
T 1vdc_A 197 ------S----KIMQQRALSNPKIDVIWNSSVVEAYGDGERDVLGGLKVKNVVTGDVSDLKVSGLFFAIGHEP 259 (333)
T ss_dssp ------C----HHHHHHHHTCTTEEEECSEEEEEEEESSSSSSEEEEEEEETTTCCEEEEECSEEEECSCEEE
T ss_pred ------c----HHHHHHHHhCCCeeEecCCceEEEeCCCCccceeeEEEEecCCCceEEEecCEEEEEeCCcc
Confidence 0 112222 345899999 999999987763 32 24443 45 4799999999999755
No 264
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=97.61 E-value=3.7e-05 Score=81.40 Aligned_cols=36 Identities=25% Similarity=0.429 Sum_probs=33.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..||+||||||.||+.+|..|+++.|.+|+|||+++
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNISVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTCCEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCC
Confidence 469999999999999999999973589999999987
No 265
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.59 E-value=6.2e-05 Score=82.26 Aligned_cols=37 Identities=24% Similarity=0.405 Sum_probs=33.9
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...+||+||||||||+++|..|++ .|++|+|||+.+.
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~-~G~~Vtlie~~~~ 423 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLME-SGYTVHLTDTAEK 423 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSS
T ss_pred cCCceEEEECCCHHHHHHHHHHHH-CCCeEEEEeCCCC
Confidence 456899999999999999999999 9999999998654
No 266
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.58 E-value=0.00019 Score=70.47 Aligned_cols=91 Identities=15% Similarity=0.179 Sum_probs=65.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+++++.+.... . .
T Consensus 156 ~~v~ViG~G~~g~e~a~~l~~-~g~~V~l~~~~~~~~~---------------------------------~-------~ 194 (335)
T 2a87_A 156 QDIAVIGGGDSAMEEATFLTR-FARSVTLVHRRDEFRA---------------------------------S-------K 194 (335)
T ss_dssp CEEEEECSSHHHHHHHHHHTT-TCSEEEEECSSSSCSS---------------------------------C-------T
T ss_pred CEEEEECCCHHHHHHHHHHHH-hCCeEEEEEcCCcCCc---------------------------------c-------H
Confidence 579999999999999999999 9999999997643100 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCC--EEEEEe-CCC--cEEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEF--ESSIVC-DDG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~--~~~v~~-~~g--~~i~a~~vI~A~G~~s 227 (503)
.+.+ +...+.|++++ +++|+++..+++ .+.+.. .+| +++.+|.||.|+|...
T Consensus 195 -------~~~~---~~~~~~gV~v~~~~~v~~i~~~~~~~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 252 (335)
T 2a87_A 195 -------IMLD---RARNNDKIRFLTNHTVVAVDGDTTVTGLRVRDTNTGAETTLPVTGVFVAIGHEP 252 (335)
T ss_dssp -------THHH---HHHHCTTEEEECSEEEEEEECSSSCCEEEEEEETTSCCEEECCSCEEECSCEEE
T ss_pred -------HHHH---HHhccCCcEEEeCceeEEEecCCcEeEEEEEEcCCCceEEeecCEEEEccCCcc
Confidence 0111 11235899999 999999987654 244432 244 4799999999999755
No 267
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.55 E-value=0.00055 Score=71.66 Aligned_cols=95 Identities=18% Similarity=0.197 Sum_probs=68.8
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCCc
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPY 166 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (503)
.++|||||..|+-+|..|++ .|.+|+++++... . ..+
T Consensus 212 ~vvVIGgG~ig~E~A~~l~~-~G~~Vtlv~~~~~--l-----------~~~----------------------------- 248 (519)
T 3qfa_A 212 KTLVVGASYVALECAGFLAG-IGLDVTVMVRSIL--L-----------RGF----------------------------- 248 (519)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCS--S-----------TTS-----------------------------
T ss_pred eEEEECCcHHHHHHHHHHHH-cCCeEEEEecccc--c-----------ccC-----------------------------
Confidence 59999999999999999999 9999999996311 0 000
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC----CEEEEE--eCCCc---EEEeceEEecCCCCcc
Q 010693 167 GRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQE----FESSIV--CDDGN---EIKASLIVDASGFASS 228 (503)
Q Consensus 167 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~----~~~~v~--~~~g~---~i~a~~vI~A~G~~s~ 228 (503)
...+.+.+.+.+++.|++++ +++++++...+ +.+.+. ..+|. ++.+|.||.|+|....
T Consensus 249 ----d~~~~~~~~~~l~~~GV~v~~~~~v~~v~~~~~~~~~~~~v~~~~~~g~~~~~~~~D~vi~a~G~~p~ 316 (519)
T 3qfa_A 249 ----DQDMANKIGEHMEEHGIKFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRDAC 316 (519)
T ss_dssp ----CHHHHHHHHHHHHHTTCEEEESEEEEEEEEEECCTTCEEEEEEEESSSSCEEEEEESEEEECSCEEES
T ss_pred ----CHHHHHHHHHHHHHCCCEEEeCCeEEEEEEccCCCCceEEEEEEECCCcEEEEEECCEEEEecCCccc
Confidence 01244556666778999999 88888876533 344444 34552 5789999999997653
No 268
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=97.54 E-value=0.00014 Score=76.48 Aligned_cols=35 Identities=20% Similarity=0.322 Sum_probs=32.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.-.|+|||+|.+|+-+|..|++ .|.+|++++|.+.
T Consensus 178 ~krV~VIG~G~sgve~a~~l~~-~~~~Vtv~~r~~~ 212 (540)
T 3gwf_A 178 GRRVGVIGTGSTGQQVITSLAP-EVEHLTVFVRTPQ 212 (540)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT-TCSEEEEEESSCC
T ss_pred cceEEEECCCchHHHHHHHHHh-hCCEEEEEECCCC
Confidence 4579999999999999999999 9999999999876
No 269
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=97.53 E-value=0.00025 Score=73.88 Aligned_cols=95 Identities=19% Similarity=0.370 Sum_probs=66.5
Q ss_pred cEEEECCCHHHHHHHHHHHccCC--------------CcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEE
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHS--------------VKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCV 152 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G--------------~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~ 152 (503)
.++|||||+.|+=+|..|++ .+ .+|+|+|+.+..
T Consensus 219 ~vvVvGgG~tGvE~A~~l~~-~~~~~l~~~~~~~~~~~~V~lve~~~~i------------------------------- 266 (502)
T 4g6h_A 219 SIVVVGGGPTGVEAAGELQD-YVHQDLRKFLPALAEEVQIHLVEALPIV------------------------------- 266 (502)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HHHHTHHHHCHHHHHHCEEEEECSSSSS-------------------------------
T ss_pred ceEEECCCcchhhhHHHHHH-HHHHHHHhhcccccccceeEEecccccc-------------------------------
Confidence 59999999999999998876 32 456666643310
Q ss_pred EecCCcccccCCCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCc----EEEeceEEecCCCCc
Q 010693 153 FINDHKTKYLDRPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGN----EIKASLIVDASGFAS 227 (503)
Q Consensus 153 ~~~~~~~~~~~~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~----~i~a~~vI~A~G~~s 227 (503)
...+ ...+.+.+.+.+++.||+++ +++|++++.++....+...||+ +|.||.||.|.|...
T Consensus 267 ----------l~~~----~~~~~~~~~~~L~~~GV~v~~~~~v~~v~~~~~~~~~~~~dg~~~~~~i~ad~viwa~Gv~~ 332 (502)
T 4g6h_A 267 ----------LNMF----EKKLSSYAQSHLENTSIKVHLRTAVAKVEEKQLLAKTKHEDGKITEETIPYGTLIWATGNKA 332 (502)
T ss_dssp ----------STTS----CHHHHHHHHHHHHHTTCEEETTEEEEEECSSEEEEEEECTTSCEEEEEEECSEEEECCCEEC
T ss_pred ----------ccCC----CHHHHHHHHHHHHhcceeeecCceEEEEeCCceEEEEEecCcccceeeeccCEEEEccCCcC
Confidence 0111 13455666777788999999 9999998744333344556664 699999999999643
No 270
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=97.52 E-value=7.7e-05 Score=80.62 Aligned_cols=40 Identities=30% Similarity=0.403 Sum_probs=35.6
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
....+||+|||||++|+++|+.|++ .|++|+|+|+.+..+
T Consensus 104 ~~~~~~v~viG~G~~gl~~a~~l~~-~g~~v~~~e~~~~~g 143 (662)
T 2z3y_A 104 TKKTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRVG 143 (662)
T ss_dssp SSCCCEEEEECCBHHHHHHHHHHHH-TTCEEEEECSSSSSB
T ss_pred ccCCCeEEEECcCHHHHHHHHHHHH-CCCeEEEEecCCCCC
Confidence 3456899999999999999999999 999999999986653
No 271
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=97.46 E-value=0.0001 Score=81.27 Aligned_cols=39 Identities=31% Similarity=0.413 Sum_probs=35.2
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
...+||+|||||++||++|+.|++ +|++|+|||+.+..+
T Consensus 276 ~~~~~v~viG~G~aGl~~A~~l~~-~g~~v~v~E~~~~~G 314 (852)
T 2xag_A 276 KKTGKVIIIGSGVSGLAAARQLQS-FGMDVTLLEARDRVG 314 (852)
T ss_dssp SCCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHH-CCCcEEEEEecCcCC
Confidence 446899999999999999999999 999999999987654
No 272
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=97.46 E-value=0.00093 Score=71.23 Aligned_cols=95 Identities=17% Similarity=0.146 Sum_probs=67.7
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCCc
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRPY 166 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (503)
.|+|||||..|+-+|..|++ .|.+|+++++.. . . ..
T Consensus 288 ~vvViGgG~~g~E~A~~l~~-~g~~Vtlv~~~~-~-l-----------~~------------------------------ 323 (598)
T 2x8g_A 288 KTLVIGASYVALECAGFLAS-LGGDVTVMVRSI-L-L-----------RG------------------------------ 323 (598)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCEEEEESSC-S-S-----------TT------------------------------
T ss_pred EEEEECCCHHHHHHHHHHHH-cCCEEEEEECCc-C-c-----------Cc------------------------------
Confidence 69999999999999999999 999999999641 0 0 00
Q ss_pred cccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe------C---CEEEEE--eCCCcEEE--eceEEecCCCCcc
Q 010693 167 GRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ------E---FESSIV--CDDGNEIK--ASLIVDASGFASS 228 (503)
Q Consensus 167 ~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~------~---~~~~v~--~~~g~~i~--a~~vI~A~G~~s~ 228 (503)
.+ ..+.+.+.+.+++.|++++ +++++.+... + +.+.+. ..+|+++. +|.||.|.|..+.
T Consensus 324 --~d-~~~~~~~~~~l~~~gv~i~~~~~v~~v~~~~~~~~~~~~~~~~~v~~~~~~g~~~~~~~D~vi~a~G~~p~ 396 (598)
T 2x8g_A 324 --FD-QQMAEKVGDYMENHGVKFAKLCVPDEIKQLKVVDTENNKPGLLLVKGHYTDGKKFEEEFETVIFAVGREPQ 396 (598)
T ss_dssp --SC-HHHHHHHHHHHHHTTCEEEETEEEEEEEEEECCBTTTTBCCEEEEEEEETTSCEEEEEESEEEECSCEEEC
T ss_pred --CC-HHHHHHHHHHHHhCCCEEEECCeEEEEEeccccccccCCCceEEEEEEeCCCcEEeccCCEEEEEeCCccc
Confidence 00 1123445555667899999 8888877542 2 444443 46777655 9999999997653
No 273
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=97.46 E-value=1.7e-05 Score=83.60 Aligned_cols=36 Identities=19% Similarity=0.322 Sum_probs=33.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
.-.|+|||+|++|+-+|..|++ .+.+|+|++|.+..
T Consensus 185 ~krV~VIG~G~tgve~a~~la~-~~~~Vtv~~r~~~~ 220 (545)
T 3uox_A 185 GKRVGVIGTGATGVQIIPIAAE-TAKELYVFQRTPNW 220 (545)
T ss_dssp TCEEEEECCSHHHHHHHHHHTT-TBSEEEEEESSCCC
T ss_pred CCeEEEECCCccHHHHHHHHHh-hCCEEEEEEcCCCc
Confidence 3579999999999999999999 99999999998764
No 274
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.43 E-value=4.4e-05 Score=76.90 Aligned_cols=85 Identities=18% Similarity=0.168 Sum_probs=64.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-+|+|||||+.|+-+|..|++ .|.+|+|+|+.+.... + .
T Consensus 147 ~~vvVIGgG~~g~E~A~~l~~-~g~~Vtvv~~~~~~l~-~---------------------------------------~ 185 (385)
T 3klj_A 147 GKAFIIGGGILGIELAQAIID-SGTPASIGIILEYPLE-R---------------------------------------Q 185 (385)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-HTCCEEEECSSSSSCT-T---------------------------------------T
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCeEEEEEcCCccch-h---------------------------------------h
Confidence 479999999999999999999 9999999998653210 0 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
+ ...+.+.+.+.+++.|++++ +++|+++ |+++.||.||.|+|....
T Consensus 186 ---~-~~~~~~~~~~~l~~~gV~~~~~~~v~~i-------------g~~~~~D~vv~a~G~~p~ 232 (385)
T 3klj_A 186 ---L-DRDGGLFLKDKLDRLGIKIYTNSNFEEM-------------GDLIRSSCVITAVGVKPN 232 (385)
T ss_dssp ---S-CHHHHHHHHHHHHTTTCEEECSCCGGGC-------------HHHHHHSEEEECCCEEEC
T ss_pred ---c-CHHHHHHHHHHHHhCCCEEEeCCEEEEc-------------CeEEecCeEEECcCcccC
Confidence 0 02234555666777899999 7777665 557899999999997653
No 275
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=97.42 E-value=6.1e-05 Score=79.55 Aligned_cols=37 Identities=22% Similarity=0.452 Sum_probs=33.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
.||+||||||.||+.+|..|+++.|.+|+|||+++..
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDVSVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTCCEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCCcEEEEecCCcc
Confidence 5999999999999999999998468999999998644
No 276
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=97.39 E-value=0.00011 Score=76.72 Aligned_cols=36 Identities=19% Similarity=0.209 Sum_probs=33.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..||++|||+|++|+.+|..|++ .|++|+|||+++.
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~ 39 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGE-AGVQTLMLEMGQL 39 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHh-CCCcEEEEeCCCC
Confidence 46999999999999999999999 9999999999863
No 277
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=97.39 E-value=7.4e-05 Score=78.65 Aligned_cols=35 Identities=34% Similarity=0.548 Sum_probs=32.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..||+||||||+||+.+|..|++ |.+|+|||+++.
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse--g~~VlvLEaG~~ 59 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE--KYKVLVLERGSL 59 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT--TSCEEEECSSBC
T ss_pred CcccEEEECccHHHHHHHHHHhc--CCcEEEEecCCC
Confidence 46999999999999999999998 899999999864
No 278
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.34 E-value=0.00078 Score=70.54 Aligned_cols=90 Identities=19% Similarity=0.223 Sum_probs=67.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||||.+|+-+|..|++ .|.+|+++++.+.... +
T Consensus 356 k~V~ViGgG~~g~E~A~~L~~-~g~~Vtlv~~~~~l~~--------------------------------~--------- 393 (521)
T 1hyu_A 356 KRVAVIGGGNSGVEAAIDLAG-IVEHVTLLEFAPEMKA--------------------------------D--------- 393 (521)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-HBSEEEEECSSSSCCS--------------------------------C---------
T ss_pred CeEEEECCCHHHHHHHHHHHh-hCCEEEEEEeCcccCc--------------------------------C---------
Confidence 479999999999999999999 9999999997643100 0
Q ss_pred ccccCHHHHHHHHHHHHHh-CCcEEE-EeEEEEEEEeCCEE-EEEeC---CCc--EEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVS-NGVKFH-KAKVWHVNHQEFES-SIVCD---DGN--EIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~-~gv~~~-~~~v~~i~~~~~~~-~v~~~---~g~--~i~a~~vI~A~G~~s 227 (503)
..+.+.+.+ .|++++ +++++++..+++.+ .|.+. +|+ ++.+|.||.|.|..+
T Consensus 394 ----------~~l~~~l~~~~gV~v~~~~~v~~i~~~~~~v~~v~~~~~~~g~~~~i~~D~vi~a~G~~p 453 (521)
T 1hyu_A 394 ----------QVLQDKVRSLKNVDIILNAQTTEVKGDGSKVVGLEYRDRVSGDIHSVALAGIFVQIGLLP 453 (521)
T ss_dssp ----------HHHHHHHTTCTTEEEECSEEEEEEEECSSSEEEEEEEETTTCCEEEEECSEEEECCCEEE
T ss_pred ----------HHHHHHHhcCCCcEEEeCCEEEEEEcCCCcEEEEEEEeCCCCceEEEEcCEEEECcCCCC
Confidence 123344445 699999 99999998765543 34443 354 689999999998644
No 279
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=97.34 E-value=0.00017 Score=75.32 Aligned_cols=38 Identities=21% Similarity=0.277 Sum_probs=34.6
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...+||++|||+|++|+.+|..|++ .|.+|+|||+++.
T Consensus 8 ~~~~~d~~iiG~G~~g~~~a~~l~~-~~~~v~~~e~~~~ 45 (507)
T 1coy_A 8 DGDRVPALVIGSGYGGAVAALRLTQ-AGIPTQIVEMGRS 45 (507)
T ss_dssp TTCEEEEEEECCSHHHHHHHHHHHH-TTCCEEEECSSCC
T ss_pred cCCcCCEEEECCCHHHHHHHHHHHH-CCCcEEEEECCCC
Confidence 3457999999999999999999999 9999999998853
No 280
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=97.25 E-value=0.0002 Score=75.46 Aligned_cols=37 Identities=32% Similarity=0.584 Sum_probs=33.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccC-CCcEEEEcCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRH-SVKVCCVDPSPLS 121 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~-G~~V~viE~~~~~ 121 (503)
..||++|||+|++|+.+|..|++ . |.+|+|||+++..
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~-~~~~~v~~~e~g~~~ 49 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSE-DPAVSVALVEAGPDD 49 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTT-STTSCEEEECSSCCC
T ss_pred CcCCEEEECcCHHHHHHHHHHHh-CCCCCEEEEecCCcC
Confidence 46999999999999999999999 7 8999999998543
No 281
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=97.22 E-value=0.00023 Score=75.68 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=34.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
+..||++|||+|++|+.+|..|+++.|.+|+|||+++..
T Consensus 22 ~~~~d~iivG~G~~g~~~a~~l~~~~~~~v~~~e~g~~~ 60 (587)
T 1gpe_A 22 GKTYDYIIAGGGLTGLTVAAKLTENPKIKVLVIEKGFYE 60 (587)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHTSTTCCEEEEESSCCC
T ss_pred cccCCEEEECcCHHHHHHHHHHHhCCCCcEEEEecCCcc
Confidence 357999999999999999999998459999999998543
No 282
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=97.17 E-value=0.00017 Score=76.01 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=32.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
.-.|+|||+|.+|+-+|..|++ .|.+|++++|.+..
T Consensus 191 ~krV~VIG~G~sgve~a~~l~~-~~~~Vtv~~r~~~~ 226 (549)
T 4ap3_A 191 GKRVGVIGTGSSGIQSIPIIAE-QAEQLFVFQRSANY 226 (549)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HBSEEEEEESSCCC
T ss_pred CCEEEEECCCchHHHHHHHHHh-hCCEEEEEECCCCc
Confidence 3579999999999999999999 99999999998753
No 283
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=97.17 E-value=0.0006 Score=69.90 Aligned_cols=78 Identities=8% Similarity=0.115 Sum_probs=58.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCc-EEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVK-VCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~-V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
-+|+|||+|.+|+=+|..|++ .|.+ |+++++.+..
T Consensus 213 k~VvVvG~G~sg~e~A~~l~~-~~~~~V~l~~r~~~~------------------------------------------- 248 (447)
T 2gv8_A 213 ESVLVVGGASSANDLVRHLTP-VAKHPIYQSLLGGGD------------------------------------------- 248 (447)
T ss_dssp CCEEEECSSHHHHHHHHHHTT-TSCSSEEEECTTCCS-------------------------------------------
T ss_pred CEEEEEccCcCHHHHHHHHHH-HhCCcEEEEeCCCCc-------------------------------------------
Confidence 469999999999999999999 9999 9999986532
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcE-EEeceEEecCCCCc
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNE-IKASLIVDASGFAS 227 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~-i~a~~vI~A~G~~s 227 (503)
....|+++ ...|+++..+++ .|++.||++ +.+|.||.|+|...
T Consensus 249 -----------------l~~~~i~~-~~~v~~~~~~~~--~v~~~dG~~~~~~D~vi~atG~~~ 292 (447)
T 2gv8_A 249 -----------------IQNESLQQ-VPEITKFDPTTR--EIYLKGGKVLSNIDRVIYCTGYLY 292 (447)
T ss_dssp -----------------CBCSSEEE-ECCEEEEETTTT--EEEETTTEEECCCSEEEECCCBCC
T ss_pred -----------------CCCCCeEE-ecCeEEEecCCC--EEEECCCCEeccCCEEEECCCCCc
Confidence 01234442 456666653333 466788876 78999999999865
No 284
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.09 E-value=0.0013 Score=67.88 Aligned_cols=79 Identities=14% Similarity=0.174 Sum_probs=59.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|.+|+=+|..|++ .|.+|+++++.+.... . .+
T Consensus 198 k~VvVVG~G~sg~eiA~~l~~-~g~~V~li~~~~~~~~-----~----------------~~------------------ 237 (464)
T 2xve_A 198 KTVLLVGSSYSAEDIGSQCYK-YGAKKLISCYRTAPMG-----Y----------------KW------------------ 237 (464)
T ss_dssp SEEEEECCSTTHHHHHHHHHH-TTCSEEEEECSSCCCC-----C----------------CC------------------
T ss_pred CEEEEEcCCCCHHHHHHHHHH-hCCeEEEEEECCCCCC-----C----------------CC------------------
Confidence 469999999999999999999 9999999997653210 0 00
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
..|++++ ..|+++. ++ .|++.||+++.+|.||.|+|...
T Consensus 238 ------------------~~~V~~~-~~V~~i~--~~--~V~~~dG~~i~~D~Vi~atG~~p 276 (464)
T 2xve_A 238 ------------------PENWDER-PNLVRVD--TE--NAYFADGSSEKVDAIILCTGYIH 276 (464)
T ss_dssp ------------------CTTEEEC-SCEEEEC--SS--EEEETTSCEEECSEEEECCCBCC
T ss_pred ------------------CCceEEc-CCeEEEe--CC--EEEECCCCEEeCCEEEECCCCCC
Confidence 0255555 5566664 33 36778999999999999999865
No 285
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=97.00 E-value=0.00031 Score=75.60 Aligned_cols=36 Identities=19% Similarity=0.421 Sum_probs=33.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCC--------CcEEEEcCCC-CC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHS--------VKVCCVDPSP-LS 121 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G--------~~V~viE~~~-~~ 121 (503)
..+|+|||||++||++|+.|++ .| ++|+|+|+++ ..
T Consensus 56 ~~~v~IiGaGiaGL~aA~~L~~-~g~~~~~~~~~~V~v~E~~~~r~ 100 (721)
T 3ayj_A 56 NYRIAIVGGGAGGIAALYELGR-LAATLPAGSGIDVQIYEADPDSF 100 (721)
T ss_dssp EEEEEEECCSHHHHHHHHHHHH-HHTTSCTTCEEEEEEECCCTTBG
T ss_pred CCeEEEECCCHHHHHHHHHHHH-cCcccccCCCceEEEEeccCccc
Confidence 4789999999999999999999 88 9999999987 44
No 286
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.84 E-value=0.0015 Score=73.43 Aligned_cols=88 Identities=19% Similarity=0.302 Sum_probs=66.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
-.|+|||+|+.|+-+|..|++ .|.+|+|+|+.+... .
T Consensus 285 k~vvViGgG~~g~E~A~~L~~-~G~~Vtvv~~~~~~~-----------------~------------------------- 321 (965)
T 2gag_A 285 ARIAVATTNDSAYELVRELAA-TGGVVAVIDARSSIS-----------------A------------------------- 321 (965)
T ss_dssp SSEEEEESSTTHHHHHHHHGG-GTCCSEEEESCSSCC-----------------H-------------------------
T ss_pred CeEEEEcCCHHHHHHHHHHHH-cCCcEEEEECCCccc-----------------h-------------------------
Confidence 469999999999999999999 999999999765210 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEe-CCE-EEEEeCC-------C--cEEEeceEEecCCCCcc
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQ-EFE-SSIVCDD-------G--NEIKASLIVDASGFASS 228 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~-~~~-~~v~~~~-------g--~~i~a~~vI~A~G~~s~ 228 (503)
. .+.+++.||+++ +++|+++..+ ++. ..|++.+ | +++.+|.||.|.|....
T Consensus 322 ------~------~~~l~~~GV~v~~~~~v~~i~~~~~~~v~~v~~~~~~~~~~~G~~~~i~~D~Vv~a~G~~P~ 384 (965)
T 2gag_A 322 ------A------AAQAVADGVQVISGSVVVDTEADENGELSAIVVAELDEARELGGTQRFEADVLAVAGGFNPV 384 (965)
T ss_dssp ------H------HHHHHHTTCCEEETEEEEEEEECTTSCEEEEEEEEECTTCCEEEEEEEECSEEEEECCEEEC
T ss_pred ------h------HHHHHhCCeEEEeCCEeEEEeccCCCCEEEEEEEeccccCCCCceEEEEcCEEEECCCcCcC
Confidence 0 234557899999 8999999874 332 2344432 4 57999999999997654
No 287
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.84 E-value=0.0036 Score=64.35 Aligned_cols=130 Identities=17% Similarity=0.173 Sum_probs=72.7
Q ss_pred cCcEEEECCCHHHHHHHHHHH--------------------ccCCC-cEEEEcCCCCCCCCCcccchhHhhhhcCchhhh
Q 010693 85 RYDVIIIGTGPAGLRLAEQVS--------------------SRHSV-KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCL 143 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La--------------------~~~G~-~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~ 143 (503)
.-.|+|||+|..|+=+|..|+ + .|. +|+|++|.+.... .+...++..+.-
T Consensus 145 ~~~vvVIGgG~~g~e~A~~L~~~~~~l~~tdi~~~a~~~l~~-~g~~~V~lv~r~~~~~~----~ft~~el~~l~~---- 215 (460)
T 1cjc_A 145 CDTAVILGQGNVALDVARILLTPPDHLEKTDITEAALGALRQ-SRVKTVWIVGRRGPLQV----AFTIKELREMIQ---- 215 (460)
T ss_dssp SSEEEEESCSHHHHHHHHHHHSCGGGGTTSCCCHHHHHHHHT-CCCCEEEEECSSCGGGC----CCCHHHHHHHHT----
T ss_pred CCEEEEECCCHHHHHHHHHHhhchhhhccccccHHHHHHHhh-CCCcEEEEEEcCChHhh----ccCHHHHHHhhc----
Confidence 357999999999999999999 6 788 7999998753221 111122222100
Q ss_pred hhccCceEEEecCCcc---cccCCCccccCHHHHHHHHHHHHHh--------------CCcEEE-EeEEEEEEEeC-C-E
Q 010693 144 DKTWPMTCVFINDHKT---KYLDRPYGRVSRNILKTKLLENCVS--------------NGVKFH-KAKVWHVNHQE-F-E 203 (503)
Q Consensus 144 ~~~~~~~~~~~~~~~~---~~~~~~~~~v~r~~l~~~L~~~~~~--------------~gv~~~-~~~v~~i~~~~-~-~ 203 (503)
.+...+..+.... .......... .+.+.+.|.+.+.+ .|++++ ++.+.++..++ + .
T Consensus 216 ---lp~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~gv~~~~~~~~~~i~~~~~~~~ 291 (460)
T 1cjc_A 216 ---LPGTRPMLDPADFLGLQDRIKEAARP-RKRLMELLLRTATEKPGVEEAARRASASRAWGLRFFRSPQQVLPSPDGRR 291 (460)
T ss_dssp ---CTTEEEECCGGGGTTHHHHTTTSCHH-HHHHHHHHHHHHHSCCCHHHHHHHHTCSEEEEEECSEEEEEEEECTTSSS
T ss_pred ---CCCceeEechhhhcchhhhhhhccHH-HHHHHHHHHHHHHhccccccccCCCCCCceEEEECCCChheEEcCCCCce
Confidence 0011111111100 0000001111 22344555555544 789999 88999987653 3 2
Q ss_pred E-EEEeC---------------CC--cEEEeceEEecCCCCc
Q 010693 204 S-SIVCD---------------DG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 204 ~-~v~~~---------------~g--~~i~a~~vI~A~G~~s 227 (503)
+ .|++. +| +++.||+||.|.|..+
T Consensus 292 v~~v~~~~~~l~~~~~~~~~~~~g~~~~i~~d~Vi~a~G~~p 333 (460)
T 1cjc_A 292 AAGIRLAVTRLEGIGEATRAVPTGDVEDLPCGLVLSSIGYKS 333 (460)
T ss_dssp EEEEEEEEEEEESSGGGCEEEEEEEEEEEECSEEEECCCEEC
T ss_pred EEEEEEEEEEEccccCCCcccCCCceEEEEcCEEEECCCCCC
Confidence 2 23321 34 4799999999999866
No 288
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=96.75 E-value=0.0013 Score=67.65 Aligned_cols=35 Identities=14% Similarity=0.294 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~~ 120 (503)
.-+|+|||||..|+-+|..+.+ .|. +|++++|.+.
T Consensus 264 gk~VvVIGgG~~a~d~A~~~~r-~Ga~~Vtiv~r~~~ 299 (456)
T 2vdc_G 264 GKHVVVLGGGDTAMDCVRTAIR-QGATSVKCLYRRDR 299 (456)
T ss_dssp CSEEEEECSSHHHHHHHHHHHH-TTCSEEEEECSSCS
T ss_pred CCEEEEECCChhHHHHHHHHHH-cCCCEEEEEEeCCc
Confidence 3579999999999999999999 998 5999998654
No 289
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.73 E-value=0.0031 Score=64.75 Aligned_cols=128 Identities=17% Similarity=0.170 Sum_probs=72.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC--------------------CC-cEEEEcCCCCCCCCCcccchhHhhhhcCchhhh
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH--------------------SV-KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCL 143 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~--------------------G~-~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~ 143 (503)
.-.|+|||+|..|+=+|..|++ . |. +|+|++|++.... .+...++.++.-
T Consensus 147 ~~~vvVIG~G~~g~e~A~~L~~-~~~~l~~tdi~~~~~~~l~~~g~~~V~lv~r~~~~~~----~f~~~elrel~~---- 217 (456)
T 1lqt_A 147 GARAVVIGNGNVALDVARILLT-DPDVLARTDIADHALESLRPRGIQEVVIVGRRGPLQA----AFTTLELRELAD---- 217 (456)
T ss_dssp SSEEEEECCSHHHHHHHHHHHS-CHHHHTTSCCCHHHHHHHTTCCCCEEEEECSSCGGGC----CCCHHHHHHGGG----
T ss_pred CCEEEEECCCHHHHHHHHHHHh-hhhhhcCCCccHHHHHHHHHCCCcEEEEEecCChhhh----ccChHHHHHhhc----
Confidence 3579999999999999999997 5 64 9999998653211 111122222110
Q ss_pred hhccCceEEEecCCcccccCCCcc----ccC--HHHHHHHHHHHHHh------CCcEEE-EeEEEEEEEeCC--EEEEEe
Q 010693 144 DKTWPMTCVFINDHKTKYLDRPYG----RVS--RNILKTKLLENCVS------NGVKFH-KAKVWHVNHQEF--ESSIVC 208 (503)
Q Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~----~v~--r~~l~~~L~~~~~~------~gv~~~-~~~v~~i~~~~~--~~~v~~ 208 (503)
.++..+..+... +..... ..+ ++.+.+.|.+.+.+ .|++++ ++++.++..++. .+.+..
T Consensus 218 ---lp~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~gv~i~~~~~~~~i~~~~~v~~v~~~~ 291 (456)
T 1lqt_A 218 ---LDGVDVVIDPAE---LDGITDEDAAAVGKVCKQNIKVLRGYADREPRPGHRRMVFRFLTSPIEIKGKRKVERIVLGR 291 (456)
T ss_dssp ---CTTEEEECCGGG---GTTCCHHHHHHHCHHHHHHHHHHHHHHTCC-CTTSEEEEEECSEEEEEEECSSSCCEEEEEE
T ss_pred ---CCCceeeeChHH---hccchhhhhhhccHHHHHHHHHHHHHhhcCCCCCCceEEEEeCCCCeEEecCCcEeEEEEEE
Confidence 011111111110 000000 011 13334555555555 689999 899999876532 233321
Q ss_pred --------------CCC--cEEEeceEEecCCCCc
Q 010693 209 --------------DDG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 209 --------------~~g--~~i~a~~vI~A~G~~s 227 (503)
.+| +++.||.||.|.|..+
T Consensus 292 ~~~~~~~~~~~~~~~~g~~~~i~~d~vi~a~G~~p 326 (456)
T 1lqt_A 292 NELVSDGSGRVAAKDTGEREELPAQLVVRSVGYRG 326 (456)
T ss_dssp EEEEECSSSSEEEEEEEEEEEEECSEEEECSCEEC
T ss_pred EEecCCCcccccccCCCceEEEEcCEEEEcccccc
Confidence 134 3699999999999765
No 290
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.69 E-value=0.0066 Score=65.54 Aligned_cols=131 Identities=17% Similarity=0.124 Sum_probs=68.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhh-ccCceEEEecCCcccccC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDK-TWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 163 (503)
.-.|+|||||..|+-+|..|++ .|.+|++.-. .+.+.++.-...+....+...... ......+..-......+.
T Consensus 494 ~~~VvVIGgG~~g~E~A~~l~~-~G~~vtv~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~~l~ 568 (671)
T 1ps9_A 494 GNKVAIIGCGGIGFDTAMYLSQ-PGESTSQNIA----GFCNEWGIDSSLQQAGGLSPQGMQIPRSPRQIVMLQRKASKPG 568 (671)
T ss_dssp CSEEEEECCHHHHHHHHHHHTC-CSSCGGGCHH----HHHHHTTBCTTCCSGGGBCTTCCCCCCCSSEEEEECSSCSCTT
T ss_pred CCeEEEECCChhHHHHHHHHHh-cCCCcccchh----hhhhhhcccccccccccccccccccCCCCcEEEEEEecchhhc
Confidence 3579999999999999999999 8977654210 000001100000000000000000 000111111111111111
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCCc
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~s 227 (503)
..+. . .....+.+.+++.||+++ +++|++++ ++++.+. .+| +++.+|.||.|.|..+
T Consensus 569 ~~l~---~-~~~~~~~~~l~~~GV~v~~~~~v~~i~--~~~v~~~-~~G~~~~i~~D~Vi~a~G~~p 628 (671)
T 1ps9_A 569 QGLG---K-TTGWIHRTTLLSRGVKMIPGVSYQKID--DDGLHVV-INGETQVLAVDNVVICAGQEP 628 (671)
T ss_dssp TTSC---T-TTHHHHHHHHHHTTCEEECSCEEEEEE--TTEEEEE-ETTEEEEECCSEEEECCCEEE
T ss_pred cccc---c-ccHHHHHHHHHhcCCEEEeCcEEEEEe--CCeEEEe-cCCeEEEEeCCEEEECCCccc
Confidence 1111 1 122344555667899999 99999987 4455554 567 5799999999998754
No 291
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.68 E-value=0.0078 Score=68.17 Aligned_cols=90 Identities=17% Similarity=0.153 Sum_probs=63.2
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDRP 165 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (503)
.|+|||||..|+=+|..+++ .|. +|+|+++.+....+ .. .
T Consensus 334 ~VvVIGgG~~g~e~A~~~~~-~G~~~Vtvv~r~~~~~~~-----------~~--~------------------------- 374 (1025)
T 1gte_A 334 AVIVLGAGDTAFDCATSALR-CGARRVFLVFRKGFVNIR-----------AV--P------------------------- 374 (1025)
T ss_dssp EEEEECSSHHHHHHHHHHHH-TTCSEEEEECSSCGGGCC-----------SC--H-------------------------
T ss_pred cEEEECCChHHHHHHHHHHH-cCCCEEEEEEecChhhCC-----------CC--H-------------------------
Confidence 89999999999999999999 996 89999975410000 00 0
Q ss_pred ccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEE-EEeC------CC---------cEEEeceEEecCCCC
Q 010693 166 YGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESS-IVCD------DG---------NEIKASLIVDASGFA 226 (503)
Q Consensus 166 ~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~-v~~~------~g---------~~i~a~~vI~A~G~~ 226 (503)
.. .+.+++.|++++ ++.++++..+++.+. |++. +| .++.||.||.|.|..
T Consensus 375 ------~e-----~~~~~~~Gv~~~~~~~~~~i~~~~g~v~~v~~~~~~~~~~g~~~~~~g~~~~i~aD~Vi~A~G~~ 441 (1025)
T 1gte_A 375 ------EE-----VELAKEEKCEFLPFLSPRKVIVKGGRIVAVQFVRTEQDETGKWNEDEDQIVHLKADVVISAFGSV 441 (1025)
T ss_dssp ------HH-----HHHHHHTTCEEECSEEEEEEEEETTEEEEEEEEEEEECTTSCEEEEEEEEEEEECSEEEECSCEE
T ss_pred ------HH-----HHHHHHcCCEEEeCCCceEEEccCCeEEEEEEEEeEEcCCCCcccCCCceEEEECCEEEECCCCC
Confidence 00 023456799998 888888876655442 3321 22 368999999999984
No 292
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=96.68 E-value=0.0021 Score=63.08 Aligned_cols=33 Identities=24% Similarity=0.402 Sum_probs=29.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|||+|..|+-+|..|++ .| +|+++++.+
T Consensus 163 ~~~v~VvG~G~~g~e~a~~l~~-~~-~v~~v~~~~ 195 (357)
T 4a9w_A 163 GMRVAIIGGGNSGAQILAEVST-VA-ETTWITQHE 195 (357)
T ss_dssp TSEEEEECCSHHHHHHHHHHTT-TS-EEEEECSSC
T ss_pred CCEEEEECCCcCHHHHHHHHHh-hC-CEEEEECCC
Confidence 3579999999999999999999 88 799999874
No 293
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=96.68 E-value=0.0017 Score=69.05 Aligned_cols=38 Identities=32% Similarity=0.399 Sum_probs=35.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
.+|||+|||+|+.|..+|..|++ .|.+|++||+++..+
T Consensus 7 ~~~D~~i~GtGl~~~~~a~~~~~-~g~~vl~id~~~~~g 44 (650)
T 1vg0_A 7 SDFDVIVIGTGLPESIIAAACSR-SGQRVLHVDSRSYYG 44 (650)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSSSSC
T ss_pred CcCCEEEECCcHHHHHHHHHHHh-CCCEEEEEcCCCccc
Confidence 47999999999999999999999 999999999987653
No 294
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=96.67 E-value=0.0014 Score=71.61 Aligned_cols=94 Identities=17% Similarity=0.075 Sum_probs=65.1
Q ss_pred CcEEEEC--CCHHHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccC
Q 010693 86 YDVIIIG--TGPAGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLD 163 (503)
Q Consensus 86 ~DvvIVG--gGpaGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (503)
-.|+||| ||..|+-+|..|++ .|.+|+|+++.+ ... .. .. +
T Consensus 529 k~VvVIG~GgG~~g~e~A~~l~~-~G~~Vtlv~~~~-l~~--------~~--~~-----------------~-------- 571 (729)
T 1o94_A 529 KRVVILNADTYFMAPSLAEKLAT-AGHEVTIVSGVH-LAN--------YM--HF-----------------T-------- 571 (729)
T ss_dssp SEEEEEECCCSSHHHHHHHHHHH-TTCEEEEEESSC-TTH--------HH--HH-----------------T--------
T ss_pred CeEEEEcCCCCchHHHHHHHHHH-cCCEEEEEeccc-ccc--------cc--cc-----------------c--------
Confidence 4799998 99999999999999 999999999754 110 00 00 0
Q ss_pred CCccccCHHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe--CCC-cE------------------EEeceEEe
Q 010693 164 RPYGRVSRNILKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC--DDG-NE------------------IKASLIVD 221 (503)
Q Consensus 164 ~~~~~v~r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~--~~g-~~------------------i~a~~vI~ 221 (503)
. .. ..+.+.+++.||+++ +++|+++.. +.+.+.. .++ ++ +.||.||.
T Consensus 572 -~----~~----~~~~~~l~~~GV~i~~~~~v~~i~~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~aD~Vv~ 640 (729)
T 1o94_A 572 -L----EY----PNMMRRLHELHVEELGDHFCSRIEP--GRMEIYNIWGDGSKRTYRGPGVSPRDANTSHRWIEFDSLVL 640 (729)
T ss_dssp -T----CH----HHHHHHHHHTTCEEECSEEEEEEET--TEEEEEETTCSCSCCCCCCTTSCSSCCCCCCEEEECSEEEE
T ss_pred -c----cH----HHHHHHHHhCCCEEEcCcEEEEEEC--CeEEEEEecCCceEEecccccccccccCCcceeeeCCEEEE
Confidence 0 01 234445567899999 999999873 3444443 233 22 89999999
Q ss_pred cCCCCc
Q 010693 222 ASGFAS 227 (503)
Q Consensus 222 A~G~~s 227 (503)
|.|..+
T Consensus 641 a~G~~p 646 (729)
T 1o94_A 641 VTGRHS 646 (729)
T ss_dssp ESCEEE
T ss_pred CCCCCC
Confidence 988644
No 295
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=96.44 E-value=0.021 Score=54.80 Aligned_cols=33 Identities=18% Similarity=0.268 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|+|||||..|+-+|..|++ .|.+|+|+|+.+
T Consensus 153 ~~vvViGgG~ig~e~A~~l~~-~G~~Vt~v~~~~ 185 (314)
T 4a5l_A 153 KVLMVVGGGDAAMEEALHLTK-YGSKVIILHRRD 185 (314)
T ss_dssp SEEEEECSSHHHHHHHHHHTT-TSSEEEEECSSS
T ss_pred CeEEEECCChHHHHHHHHHHH-hCCeeeeecccc
Confidence 469999999999999999999 999999999753
No 296
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=96.24 E-value=0.005 Score=52.05 Aligned_cols=37 Identities=19% Similarity=0.374 Sum_probs=32.9
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....-.|+|||+|..|..+|..|.+ .|++|+++|+++
T Consensus 4 ~~~~~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 40 (140)
T 3fwz_A 4 VDICNHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSR 40 (140)
T ss_dssp CCCCSCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred ccCCCCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCH
Confidence 4445679999999999999999999 999999999864
No 297
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.08 E-value=0.013 Score=58.90 Aligned_cols=50 Identities=20% Similarity=0.302 Sum_probs=40.0
Q ss_pred HHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCc
Q 010693 174 LKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFAS 227 (503)
Q Consensus 174 l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s 227 (503)
+.+.+.+.+++.||+++ +++|++++.+ . |++++|+++.+|.||.|.|..+
T Consensus 220 ~~~~~~~~l~~~gV~~~~~~~v~~i~~~--~--v~~~~g~~~~~D~vi~a~G~~~ 270 (409)
T 3h8l_A 220 SRKAVASIYNQLGIKLVHNFKIKEIREH--E--IVDEKGNTIPADITILLPPYTG 270 (409)
T ss_dssp HHHHHHHHHHHHTCEEECSCCEEEECSS--E--EEETTSCEEECSEEEEECCEEC
T ss_pred HHHHHHHHHHHCCCEEEcCCceEEECCC--e--EEECCCCEEeeeEEEECCCCCc
Confidence 44556666677899999 8999998743 3 6778899999999999998654
No 298
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.04 E-value=0.007 Score=61.53 Aligned_cols=51 Identities=10% Similarity=0.055 Sum_probs=37.0
Q ss_pred HHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCC--CcEEEeceEEecCCCCc
Q 010693 175 KTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDD--GNEIKASLIVDASGFAS 227 (503)
Q Consensus 175 ~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~--g~~i~a~~vI~A~G~~s 227 (503)
.+.+.+.+++.||+++ +++|++++. +.+.+...+ |+++.+|.||.|.|..+
T Consensus 203 ~~~l~~~l~~~GV~i~~~~~v~~v~~--~~v~~~~~~~~g~~i~~D~vv~a~G~~~ 256 (430)
T 3h28_A 203 KRLVEDLFAERNIDWIANVAVKAIEP--DKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHTTCEEECSCEEEEECS--SEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHCCCEEEeCCEEEEEeC--CeEEEEecCCCceEEeeeEEEECCCCcc
Confidence 3555666778999999 999999864 344443322 56899999999998643
No 299
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=95.96 E-value=0.0023 Score=67.25 Aligned_cols=36 Identities=22% Similarity=0.460 Sum_probs=32.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
.-.|+|||+|.+|+-+|..|++ .|.+|++++|.+..
T Consensus 186 gk~V~VIG~G~sg~e~a~~l~~-~~~~vtv~~r~~~~ 221 (542)
T 1w4x_A 186 GQRVGVIGTGSSGIQVSPQIAK-QAAELFVFQRTPHF 221 (542)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HBSEEEEEESSCCC
T ss_pred CCEEEEECCCccHHHHHHHHhh-cCceEEEEEcCCcc
Confidence 3579999999999999999999 99999999987654
No 300
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=95.88 E-value=0.0075 Score=51.87 Aligned_cols=35 Identities=29% Similarity=0.339 Sum_probs=31.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|+|+|+|..|..+|..|.+ .|++|+++|+++
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~-~g~~V~vid~~~ 52 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASS-SGHSVVVVDKNE 52 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCG
T ss_pred CCCcEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 34679999999999999999999 999999999864
No 301
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=95.54 E-value=0.025 Score=57.56 Aligned_cols=50 Identities=12% Similarity=0.114 Sum_probs=35.9
Q ss_pred HHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEe--CC-----CcEEEeceEEecCCCCc
Q 010693 176 TKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVC--DD-----GNEIKASLIVDASGFAS 227 (503)
Q Consensus 176 ~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~--~~-----g~~i~a~~vI~A~G~~s 227 (503)
..+.+.+++.||+++ +++|++++ ++.+.+.. .+ +.++.+|++|.|.|...
T Consensus 212 ~~~~~~l~~~gI~~~~~~~v~~v~--~~~v~~~~~~~~g~~~~~~~i~~D~vv~~~g~~~ 269 (437)
T 3sx6_A 212 GILTKGLKEEGIEAYTNCKVTKVE--DNKMYVTQVDEKGETIKEMVLPVKFGMMIPAFKG 269 (437)
T ss_dssp HHHHHHHHHTTCEEECSEEEEEEE--TTEEEEEEECTTSCEEEEEEEECSEEEEECCEEC
T ss_pred HHHHHHHHHCCCEEEcCCEEEEEE--CCeEEEEecccCCccccceEEEEeEEEEcCCCcC
Confidence 445566677899999 99999986 34454443 33 45799999999988543
No 302
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=95.43 E-value=0.013 Score=49.40 Aligned_cols=33 Identities=36% Similarity=0.618 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|+|+|+|..|..+|..|++ .|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~-~g~~V~~id~~~ 39 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTA-AGKKVLAVDKSK 39 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCeEEEEECCH
Confidence 469999999999999999999 999999999764
No 303
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=95.34 E-value=0.013 Score=48.87 Aligned_cols=33 Identities=27% Similarity=0.442 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|+|+|+|..|..+|..|++ .|++|+++|+++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~~-~g~~v~~~d~~~ 37 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLSE-KGHDIVLIDIDK 37 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 479999999999999999999 999999999753
No 304
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=95.23 E-value=0.022 Score=48.68 Aligned_cols=34 Identities=15% Similarity=0.247 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|+|+|..|..+|..|.+ .|++|+++|+++
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~~-~g~~V~vid~~~ 36 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLNQ-RGQNVTVISNLP 36 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHHH-TTCCEEEEECCC
T ss_pred CCcEEEECCCHHHHHHHHHHHH-CCCCEEEEECCC
Confidence 3469999999999999999999 999999999753
No 305
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=95.01 E-value=0.044 Score=56.85 Aligned_cols=35 Identities=9% Similarity=0.325 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHc-cCCCcEEEEcCCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSS-RHSVKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~-~~G~~V~viE~~~~ 120 (503)
-.|+|||+|-+|.=+|..|++ ..+.+|+++=|.+.
T Consensus 247 KrV~VVG~G~SA~ei~~~L~~~~~~~~v~~~~R~~~ 282 (501)
T 4b63_A 247 YNIAVLGSGQSAAEIFHDLQKRYPNSRTTLIMRDSA 282 (501)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSTTCEEEEECSSSS
T ss_pred cEEEEECCcHHHHHHHHHHHhcCCCceEEEEeCCCc
Confidence 369999999999999999987 13789999998754
No 306
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=94.95 E-value=0.021 Score=54.94 Aligned_cols=33 Identities=18% Similarity=0.259 Sum_probs=30.7
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.|+|||||+.|+-+|..|++ .|.+|+|+|+.+.
T Consensus 147 ~vvViGgG~ig~E~A~~l~~-~g~~Vtlv~~~~~ 179 (312)
T 4gcm_A 147 RLFVIGGGDSAVEEGTFLTK-FADKVTIVHRRDE 179 (312)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TCSEEEEECSSSS
T ss_pred EEEEECCCHHHHHHHHHHHh-cCCEEEEEecccc
Confidence 69999999999999999999 9999999998653
No 307
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=94.93 E-value=0.024 Score=45.64 Aligned_cols=33 Identities=21% Similarity=0.435 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCC-CcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHS-VKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G-~~V~viE~~~ 119 (503)
..|+|+|+|..|..+|..|.+ .| ++|++++|++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~-~g~~~v~~~~r~~ 39 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKT-SSNYSVTVADHDL 39 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-CSSEEEEEEESCH
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCH
Confidence 579999999999999999999 99 9999999864
No 308
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=94.63 E-value=0.06 Score=51.56 Aligned_cols=86 Identities=10% Similarity=0.108 Sum_probs=57.7
Q ss_pred CcEEEECCCH-HHHHHHHHHHccCCCcEEEEcCCCCCCCCCcccchhHhhhhcCchhhhhhccCceEEEecCCcccccCC
Q 010693 86 YDVIIIGTGP-AGLRLAEQVSSRHSVKVCCVDPSPLSTWPNNYGVWVDEFEDIGLVDCLDKTWPMTCVFINDHKTKYLDR 164 (503)
Q Consensus 86 ~DvvIVGgGp-aGl~~A~~La~~~G~~V~viE~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (503)
-+++|||||. +++.+|..+++ .|.+|+++++++...
T Consensus 147 ~~~~VIggG~~~~~e~a~~~~~-~~~~v~i~~~~~~~~------------------------------------------ 183 (304)
T 4fk1_A 147 QPLIIISENEDHTLHMTKLVYN-WSTDLVIATNGNELS------------------------------------------ 183 (304)
T ss_dssp SCEEEECCSHHHHHHHHHHHTT-TCSCEEEECSSCCCC------------------------------------------
T ss_pred CceeeecCCCchhhhHHHHHHh-CCceEEEEeccccch------------------------------------------
Confidence 3577777775 56788888888 899999998642100
Q ss_pred CccccCHHHHHHHHHHHHHhCCcEEEEeEEEEEEEeCCE-EEEEeCCCcEEEeceEEecCCC
Q 010693 165 PYGRVSRNILKTKLLENCVSNGVKFHKAKVWHVNHQEFE-SSIVCDDGNEIKASLIVDASGF 225 (503)
Q Consensus 165 ~~~~v~r~~l~~~L~~~~~~~gv~~~~~~v~~i~~~~~~-~~v~~~~g~~i~a~~vI~A~G~ 225 (503)
+.+.+.+.+.|+.++...+..+..+++. ..|.+.+|+++.++.+|.+.|.
T Consensus 184 -----------~~~~~~l~~~g~~~~~~~v~~~~~~~~~~~~v~~~~g~~i~~~~~vi~~g~ 234 (304)
T 4fk1_A 184 -----------QTIMDELSNKNIPVITESIRTLQGEGGYLKKVEFHSGLRIERAGGFIVPTF 234 (304)
T ss_dssp -----------HHHHHHHHTTTCCEECSCEEEEESGGGCCCEEEETTSCEECCCEEEECCEE
T ss_pred -----------hhhhhhhhccceeEeeeeEEEeecCCCeeeeeeccccceeeecceeeeecc
Confidence 1122334567888884456666655543 3577889988988888777653
No 309
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=94.49 E-value=0.029 Score=49.49 Aligned_cols=34 Identities=15% Similarity=0.261 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC-CCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH-SVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~-G~~V~viE~~~ 119 (503)
.-.|+|+|+|..|..+|..|.+ . |++|+++|+++
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~-~~g~~V~vid~~~ 73 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRA-RYGKISLGIEIRE 73 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHH-HHCSCEEEEESCH
T ss_pred CCcEEEECCCHHHHHHHHHHHh-ccCCeEEEEECCH
Confidence 4469999999999999999999 9 99999999764
No 310
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=93.92 E-value=0.05 Score=45.40 Aligned_cols=33 Identities=21% Similarity=0.301 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|+|+|+|..|..+|..|.+ .|++|+++|+++
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~-~g~~v~~~d~~~ 39 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHR-MGHEVLAVDINE 39 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCCEEEESCH
T ss_pred CcEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 359999999999999999999 999999999753
No 311
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=93.84 E-value=0.045 Score=52.99 Aligned_cols=34 Identities=32% Similarity=0.406 Sum_probs=30.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|||+|.-|...|..++. +|++|+++|..+
T Consensus 6 ~~~VaViGaG~MG~giA~~~a~-~G~~V~l~D~~~ 39 (319)
T 3ado_A 6 AGDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred CCeEEEECCcHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 3569999999999999999999 999999999754
No 312
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=93.77 E-value=0.041 Score=50.09 Aligned_cols=32 Identities=28% Similarity=0.353 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|+|||+|..|..+|..|.+ .|++|+++|+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~~-~g~~v~vid~~~ 33 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSMLS-RKYGVVIINKDR 33 (218)
T ss_dssp CEEEECCHHHHHHHHHHHHH-TTCCEEEEESCH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 58999999999999999999 999999999764
No 313
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=93.71 E-value=0.074 Score=54.96 Aligned_cols=49 Identities=16% Similarity=0.189 Sum_probs=39.5
Q ss_pred HHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCCcEEEeceEEecCCCCcc
Q 010693 180 ENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDGNEIKASLIVDASGFASS 228 (503)
Q Consensus 180 ~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g~~i~a~~vI~A~G~~s~ 228 (503)
+.+++.|++++ +++|+++..++....|.+.+|+++.||.||.|.|..+.
T Consensus 265 ~~l~~~GV~v~~~~~v~~i~~~~~v~~v~~~~g~~i~aD~Vv~a~G~~p~ 314 (493)
T 1y56_A 265 QELERWGIDYVHIPNVKRVEGNEKVERVIDMNNHEYKVDALIFADGRRPD 314 (493)
T ss_dssp HHHHHHTCEEEECSSEEEEECSSSCCEEEETTCCEEECSEEEECCCEEEC
T ss_pred HHHHhCCcEEEeCCeeEEEecCCceEEEEeCCCeEEEeCEEEECCCcCcC
Confidence 34556799999 89999998665544567888889999999999998663
No 314
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=93.28 E-value=0.063 Score=52.10 Aligned_cols=35 Identities=31% Similarity=0.387 Sum_probs=30.8
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|.|||+|.-|...|..|++ +|++|+++|+++
T Consensus 5 ~~~kI~vIGaG~MG~~iA~~la~-~G~~V~l~d~~~ 39 (319)
T 2dpo_A 5 AAGDVLIVGSGLVGRSWAMLFAS-GGFRVKLYDIEP 39 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred CCceEEEEeeCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 34579999999999999999999 999999999764
No 315
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=93.01 E-value=1.2 Score=44.84 Aligned_cols=52 Identities=12% Similarity=0.094 Sum_probs=38.7
Q ss_pred HHHHHHHHHHhCCcEEE-EeEEEEEEEeCCEEEEEeCCC--cEEEeceEEecCCCCc
Q 010693 174 LKTKLLENCVSNGVKFH-KAKVWHVNHQEFESSIVCDDG--NEIKASLIVDASGFAS 227 (503)
Q Consensus 174 l~~~L~~~~~~~gv~~~-~~~v~~i~~~~~~~~v~~~~g--~~i~a~~vI~A~G~~s 227 (503)
..+.+.+..++.||+++ +++|++++ ++.+.+...+| +++.+|++|.|.|...
T Consensus 202 ~~~~l~~~l~~~GV~~~~~~~v~~v~--~~~~~~~~~~g~~~~i~~d~vi~~~G~~~ 256 (430)
T 3hyw_A 202 SKRLVEDLFAERNIDWIANVAVKAIE--PDKVIYEDLNGNTHEVPAKFTMFMPSFQG 256 (430)
T ss_dssp HHHHHHHHHHHTTCEEECSCEEEEEC--SSEEEEECTTSCEEEEECSEEEEECEEEC
T ss_pred HHHHHHHHHHhCCeEEEeCceEEEEe--CCceEEEeeCCCceEeecceEEEeccCCC
Confidence 34555666677999999 99999986 45666665554 3799999999988543
No 316
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=92.66 E-value=0.1 Score=50.57 Aligned_cols=32 Identities=25% Similarity=0.393 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
..|+|||+|..|.+.|..|++ .|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~ 34 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLAK-TGHCVSVVSRS 34 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHHH-TTCEEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHh-CCCeEEEEeCC
Confidence 579999999999999999999 99999999975
No 317
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=92.62 E-value=0.12 Score=49.49 Aligned_cols=33 Identities=27% Similarity=0.389 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|..|...|..|++ .|++|+++|+++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la~-~G~~V~~~d~~~ 48 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAAA-TGHTVVLVDQTE 48 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 469999999999999999999 999999999754
No 318
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=92.62 E-value=0.11 Score=51.93 Aligned_cols=34 Identities=24% Similarity=0.421 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|+|+|++|+.+|..|.. .|.+|+++|+.+
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~~-lGa~V~v~D~~~ 223 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATARR-LGAVVSATDVRP 223 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSST
T ss_pred CCEEEEECCcHHHHHHHHHHHH-CCCEEEEEcCCH
Confidence 4689999999999999999999 999999999765
No 319
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=92.59 E-value=0.12 Score=49.10 Aligned_cols=33 Identities=30% Similarity=0.420 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|.|||+|.-|...|..|++ .|++|+++|+++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la~-~G~~V~l~d~~~ 37 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTAF-HGFAVTAYDINT 37 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 469999999999999999999 999999999764
No 320
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=92.49 E-value=0.13 Score=46.41 Aligned_cols=35 Identities=14% Similarity=0.253 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...|.|||+|-.|.+.|..|++ .|++|++++|++.
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~~-~g~~V~~~~~~~~ 53 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFEI-AGHEVTYYGSKDQ 53 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHHH-TTCEEEEECTTCC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCHH
Confidence 3469999999999999999999 9999999998654
No 321
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=92.44 E-value=0.12 Score=48.85 Aligned_cols=33 Identities=15% Similarity=0.210 Sum_probs=30.5
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.|.|||+|..|...|..|++ .|++|++++|++.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~~ 34 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALCK-QGHEVQGWLRVPQ 34 (291)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSSCC
T ss_pred eEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCcc
Confidence 58999999999999999999 9999999998753
No 322
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.29 E-value=0.14 Score=49.86 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
...|+|||+|-.|..+|..|++ .|+ +|+++|.++
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la~-~g~~~V~L~Di~~ 48 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLGQ-KDLGDVYMFDIIE 48 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSST
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCeEEEEECCH
Confidence 3589999999999999999999 998 999999764
No 323
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.28 E-value=0.088 Score=53.52 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=30.4
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.|+|||.|++|+++|..|++ +|++|+++|.+..
T Consensus 7 ~v~viG~G~~G~~~a~~l~~-~G~~v~~~D~~~~ 39 (439)
T 2x5o_A 7 NVVIIGLGLTGLSCVDFFLA-RGVTPRVMDTRMT 39 (439)
T ss_dssp CEEEECCHHHHHHHHHHHHT-TTCCCEEEESSSS
T ss_pred EEEEEeecHHHHHHHHHHHh-CCCEEEEEECCCC
Confidence 58999999999999999999 9999999997653
No 324
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=92.20 E-value=0.096 Score=53.46 Aligned_cols=33 Identities=21% Similarity=0.312 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|.|||.|.+|+++|..|++ +|++|++.|+++
T Consensus 10 k~v~viG~G~sG~s~A~~l~~-~G~~V~~~D~~~ 42 (451)
T 3lk7_A 10 KKVLVLGLARSGEAAARLLAK-LGAIVTVNDGKP 42 (451)
T ss_dssp CEEEEECCTTTHHHHHHHHHH-TTCEEEEEESSC
T ss_pred CEEEEEeeCHHHHHHHHHHHh-CCCEEEEEeCCc
Confidence 469999999999999999999 999999999764
No 325
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=92.08 E-value=0.17 Score=46.20 Aligned_cols=32 Identities=19% Similarity=0.362 Sum_probs=29.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDP 117 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~ 117 (503)
.-.|+|||||..|...|..|.+ .|.+|+|+++
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll~-~GA~VtVvap 62 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFLQ-EGAAITVVAP 62 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHGG-GCCCEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEECC
Confidence 3569999999999999999999 9999999985
No 326
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=92.08 E-value=0.07 Score=54.62 Aligned_cols=35 Identities=29% Similarity=0.427 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.+.|+|+|+|-.|..+|..|+. .|++|+|||+++.
T Consensus 3 ~M~iiI~G~G~vG~~la~~L~~-~~~~v~vId~d~~ 37 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENLVG-ENNDITIVDKDGD 37 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHTCS-TTEEEEEEESCHH
T ss_pred cCEEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHH
Confidence 3569999999999999999999 9999999998743
No 327
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=92.07 E-value=0.17 Score=51.53 Aligned_cols=35 Identities=23% Similarity=0.208 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...|.|||+|.-|...|..|++ .|++|+++|+++.
T Consensus 54 i~kVaVIGaG~MG~~IA~~la~-aG~~V~l~D~~~e 88 (460)
T 3k6j_A 54 VNSVAIIGGGTMGKAMAICFGL-AGIETFLVVRNEQ 88 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCHH
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCeEEEEECcHH
Confidence 4579999999999999999999 9999999998754
No 328
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=92.03 E-value=0.14 Score=50.03 Aligned_cols=33 Identities=15% Similarity=0.261 Sum_probs=30.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
...|+|||+|-.|.+.|..|++ .|++|++++|.
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~~-~g~~V~~~~r~ 35 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLAL-AGEAINVLARG 35 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHHH-TTCCEEEECCH
T ss_pred CCEEEEECcCHHHHHHHHHHHH-CCCEEEEEECh
Confidence 3579999999999999999999 99999999963
No 329
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=91.99 E-value=0.14 Score=49.47 Aligned_cols=33 Identities=21% Similarity=0.367 Sum_probs=30.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
...|+|||+|-.|..+|..|++ .|+ +|+++|++
T Consensus 7 ~mkI~IiGaG~vG~~~a~~l~~-~g~~~~V~l~d~~ 41 (319)
T 1lld_A 7 PTKLAVIGAGAVGSTLAFAAAQ-RGIAREIVLEDIA 41 (319)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCC
Confidence 3579999999999999999999 998 99999975
No 330
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=91.98 E-value=0.14 Score=49.27 Aligned_cols=35 Identities=17% Similarity=0.210 Sum_probs=32.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|.|||.|..|...|..|++ .|++|+++++.+
T Consensus 20 ~m~~I~iIG~G~mG~~~A~~l~~-~G~~V~~~dr~~ 54 (310)
T 3doj_A 20 HMMEVGFLGLGIMGKAMSMNLLK-NGFKVTVWNRTL 54 (310)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSG
T ss_pred cCCEEEEECccHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 34689999999999999999999 999999999864
No 331
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=91.93 E-value=0.16 Score=49.23 Aligned_cols=37 Identities=24% Similarity=0.324 Sum_probs=31.9
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
.+....|+|||+|-.|.++|..|+. .|+ +|+++|..+
T Consensus 4 ~m~~~kI~viGaG~vG~~~a~~l~~-~~~~~v~L~Di~~ 41 (324)
T 3gvi_A 4 SMARNKIALIGSGMIGGTLAHLAGL-KELGDVVLFDIAE 41 (324)
T ss_dssp --CCCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSS
T ss_pred CCcCCEEEEECCCHHHHHHHHHHHh-CCCCeEEEEeCCc
Confidence 3456789999999999999999999 898 999999754
No 332
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=91.93 E-value=0.12 Score=49.84 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
..|+|||+|--|.+.|..|++ .|.+|++++|+
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~-~g~~V~~~~r~ 34 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQR-SGEDVHFLLRR 34 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHH-TSCCEEEECST
T ss_pred CEEEEECcCHHHHHHHHHHHH-CCCeEEEEEcC
Confidence 469999999999999999999 99999999974
No 333
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=91.80 E-value=0.17 Score=49.35 Aligned_cols=34 Identities=24% Similarity=0.285 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
...|+|||+|-.|..+|..|++ .|+ +|+++|+++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la~-~g~~~V~L~D~~~ 43 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCAL-RELADVVLYDVVK 43 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCeEEEEECCh
Confidence 3579999999999999999999 898 999999764
No 334
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=91.76 E-value=4.2 Score=43.37 Aligned_cols=42 Identities=10% Similarity=0.130 Sum_probs=35.9
Q ss_pred CCcEEE-EeEEEEEEEeCCEEEEEeCC------CcEEEeceEEecCCCC
Q 010693 185 NGVKFH-KAKVWHVNHQEFESSIVCDD------GNEIKASLIVDASGFA 226 (503)
Q Consensus 185 ~gv~~~-~~~v~~i~~~~~~~~v~~~~------g~~i~a~~vI~A~G~~ 226 (503)
.+++++ +++|+.|..+++++.|++.+ |++++||.||.|....
T Consensus 409 ~~l~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~ 457 (662)
T 2z3y_A 409 EGLDIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLG 457 (662)
T ss_dssp TTCEEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHH
T ss_pred hcCceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHH
Confidence 367899 99999999999999998866 5679999999998643
No 335
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.73 E-value=0.16 Score=51.56 Aligned_cols=36 Identities=31% Similarity=0.402 Sum_probs=33.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
....+.|||.|-.|+.+|..|++ .|++|+++|+++.
T Consensus 7 ~~~~~~vIGlG~vG~~~A~~La~-~G~~V~~~D~~~~ 42 (446)
T 4a7p_A 7 GSVRIAMIGTGYVGLVSGACFSD-FGHEVVCVDKDAR 42 (446)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCST
T ss_pred CceEEEEEcCCHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 45789999999999999999999 9999999998765
No 336
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=91.67 E-value=0.16 Score=48.75 Aligned_cols=33 Identities=27% Similarity=0.421 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|..|...|..|++ .|++|++++|++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~r~~ 36 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLHQ-GGNDVTLIDQWP 36 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CeEEEECcCHHHHHHHHHHHh-CCCcEEEEECCH
Confidence 479999999999999999999 999999999753
No 337
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=91.45 E-value=0.17 Score=52.07 Aligned_cols=35 Identities=26% Similarity=0.442 Sum_probs=32.1
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|.|||+|-.|+.+|..|++ .|++|+++|+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la~-~G~~V~~~d~~~ 41 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLAD-IGHDVFCLDVDQ 41 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CCceEEEECcCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 35789999999999999999999 999999999764
No 338
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=91.40 E-value=0.094 Score=44.17 Aligned_cols=32 Identities=19% Similarity=0.288 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
-.|+|||+|..|..+|..|++ .|.+|++++|.
T Consensus 22 ~~v~iiG~G~iG~~~a~~l~~-~g~~v~v~~r~ 53 (144)
T 3oj0_A 22 NKILLVGNGMLASEIAPYFSY-PQYKVTVAGRN 53 (144)
T ss_dssp CEEEEECCSHHHHHHGGGCCT-TTCEEEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEcCC
Confidence 469999999999999999999 99999999975
No 339
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=91.37 E-value=0.11 Score=49.08 Aligned_cols=33 Identities=24% Similarity=0.439 Sum_probs=30.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
...|+|||||..|+..|..|.+ .|.+|+|+++.
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll~-~Ga~VtViap~ 45 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLMP-TGCKLTLVSPD 45 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHGG-GTCEEEEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHHh-CCCEEEEEcCC
Confidence 3569999999999999999999 99999999964
No 340
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=91.36 E-value=0.12 Score=50.97 Aligned_cols=34 Identities=24% Similarity=0.376 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|||+|.+|+.+|..|.. .|.+|+++|+.+
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~~-lGa~V~v~D~~~ 217 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAKR-LGAKTTGYDVRP 217 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHHH-HTCEEEEECSSG
T ss_pred CCEEEEECchHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 4679999999999999999999 999999999764
No 341
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=91.27 E-value=0.18 Score=49.65 Aligned_cols=34 Identities=24% Similarity=0.264 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||+|--|.+.|..|++ .|++|++++|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La~-~G~~V~l~~r~~ 62 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLAR-KGQKVRLWSYES 62 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHHT-TTCCEEEECSCH
T ss_pred CCeEEEECccHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 4679999999999999999999 999999999864
No 342
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=91.21 E-value=0.18 Score=51.59 Aligned_cols=35 Identities=17% Similarity=0.190 Sum_probs=32.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC-CC-cEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH-SV-KVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~-G~-~V~viE~~~~ 120 (503)
...|.|||+|-.|+.+|..|++ . |+ +|+++|+++.
T Consensus 18 ~mkIaVIGlG~mG~~lA~~la~-~~G~~~V~~~D~~~~ 54 (478)
T 3g79_A 18 IKKIGVLGMGYVGIPAAVLFAD-APCFEKVLGFQRNSK 54 (478)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-STTCCEEEEECCCCT
T ss_pred CCEEEEECcCHHHHHHHHHHHH-hCCCCeEEEEECChh
Confidence 4579999999999999999999 9 99 9999998765
No 343
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=91.08 E-value=0.23 Score=47.85 Aligned_cols=34 Identities=12% Similarity=0.170 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||+|..|...|..|++ .|++|+++++++
T Consensus 30 ~~~I~iIG~G~mG~~~a~~l~~-~g~~V~~~~~~~ 63 (316)
T 2uyy_A 30 DKKIGFLGLGLMGSGIVSNLLK-MGHTVTVWNRTA 63 (316)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-TTCCEEEECSSG
T ss_pred CCeEEEEcccHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 3579999999999999999999 999999999754
No 344
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.02 E-value=0.16 Score=51.67 Aligned_cols=33 Identities=27% Similarity=0.508 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|-.|+.+|..|++ .|++|+++|+++
T Consensus 3 mkI~VIG~G~vG~~lA~~La~-~G~~V~~~D~~~ 35 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFAE-LGANVRCIDTDR 35 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHh-cCCEEEEEECCH
Confidence 479999999999999999999 999999999864
No 345
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.01 E-value=0.2 Score=49.87 Aligned_cols=34 Identities=24% Similarity=0.332 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|+|+|.+|+.+|..+.. .|.+|+++|+.+
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~-~Ga~V~~~d~~~ 205 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAKR-LGAVVMATDVRA 205 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCS
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 4579999999999999999999 999999999764
No 346
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=90.95 E-value=0.18 Score=50.51 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|+|+|.+|+.+|..+.. .|.+|+++|+++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~~-~Ga~V~v~D~~~ 205 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAANS-LGAIVRAFDTRP 205 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCG
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCCH
Confidence 3579999999999999999999 999999999754
No 347
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=90.89 E-value=0.21 Score=48.93 Aligned_cols=33 Identities=18% Similarity=0.237 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|-.|...|..|++ .|++|++++|++
T Consensus 5 mki~iiG~G~~G~~~a~~L~~-~g~~V~~~~r~~ 37 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLAL-KGQSVLAWDIDA 37 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CeEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 579999999999999999999 999999999753
No 348
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=90.89 E-value=0.17 Score=50.89 Aligned_cols=34 Identities=32% Similarity=0.377 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..|+|||+|..|..+|..|.+ .|++|++||+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~ 38 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPD 38 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHH
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHH
Confidence 469999999999999999999 9999999998754
No 349
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=90.79 E-value=0.2 Score=48.37 Aligned_cols=33 Identities=24% Similarity=0.376 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
..|+|||+|-.|..+|..|++ .|+ +|+++|+++
T Consensus 5 ~kI~VIGaG~~G~~ia~~la~-~g~~~V~l~D~~~ 38 (317)
T 2ewd_A 5 RKIAVIGSGQIGGNIAYIVGK-DNLADVVLFDIAE 38 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCc
Confidence 579999999999999999999 898 999999754
No 350
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=90.78 E-value=0.18 Score=47.02 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
...|+|||+|-.|..+|..|++ .|. +++|+|++.
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La~-~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLAS-AGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCCB
T ss_pred CCeEEEEeeCHHHHHHHHHHHH-cCCCeEEEEcCCC
Confidence 4679999999999999999999 998 899999753
No 351
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=90.68 E-value=0.22 Score=50.29 Aligned_cols=37 Identities=19% Similarity=0.210 Sum_probs=32.7
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...+..|.|||.|-.||.+|..||+ .|++|+.+|-++
T Consensus 18 ~~~m~~IaViGlGYVGLp~A~~~A~-~G~~V~g~Did~ 54 (444)
T 3vtf_A 18 GSHMASLSVLGLGYVGVVHAVGFAL-LGHRVVGYDVNP 54 (444)
T ss_dssp TCCCCEEEEECCSHHHHHHHHHHHH-HTCEEEEECSCH
T ss_pred CCCCCEEEEEccCHHHHHHHHHHHh-CCCcEEEEECCH
Confidence 3345789999999999999999999 999999999653
No 352
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=90.64 E-value=0.2 Score=46.42 Aligned_cols=38 Identities=18% Similarity=0.253 Sum_probs=32.1
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
+.....|.|||+|--|.++|..|++ .|++|++++|++.
T Consensus 16 ~~~~~kIgiIG~G~mG~alA~~L~~-~G~~V~~~~r~~~ 53 (245)
T 3dtt_A 16 YFQGMKIAVLGTGTVGRTMAGALAD-LGHEVTIGTRDPK 53 (245)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCHH
T ss_pred ccCCCeEEEECCCHHHHHHHHHHHH-CCCEEEEEeCChh
Confidence 4445789999999999999999999 9999999998653
No 353
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=90.53 E-value=0.28 Score=47.53 Aligned_cols=33 Identities=18% Similarity=0.347 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
..|+|||+|-.|..+|..|+. .|+ +|+++|.++
T Consensus 5 ~kI~VIGaG~vG~~ia~~la~-~g~~~v~L~Di~~ 38 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIVQ-KNLGDVVLFDIVK 38 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCeEEEEeCCH
Confidence 579999999999999999999 998 999999753
No 354
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.52 E-value=0.16 Score=48.45 Aligned_cols=33 Identities=21% Similarity=0.337 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|+|||+|--|.+.|..|++ .|.+|++++|++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~~-~g~~V~~~~r~~ 35 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQQ-SLPHTTLIGRHA 35 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-HCTTCEEEESSC
T ss_pred cEEEEECCCHHHHHHHHHHHH-CCCeEEEEEecc
Confidence 479999999999999999999 999999999863
No 355
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=90.49 E-value=0.3 Score=49.88 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||+|..|...|..|++ +|++|+++|+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la~-~G~~V~l~D~~~ 70 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFAR-VGISVVAVESDP 70 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSH
T ss_pred CCEEEEECcCHHHHHHHHHHHh-CCCeEEEEECCH
Confidence 3469999999999999999999 999999999764
No 356
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=90.36 E-value=0.2 Score=48.57 Aligned_cols=35 Identities=20% Similarity=0.414 Sum_probs=31.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|.|||.|..|...|..|++ .|++|+++++.+
T Consensus 30 ~~~~I~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~ 64 (320)
T 4dll_A 30 YARKITFLGTGSMGLPMARRLCE-AGYALQVWNRTP 64 (320)
T ss_dssp CCSEEEEECCTTTHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CCCEEEEECccHHHHHHHHHHHh-CCCeEEEEcCCH
Confidence 44689999999999999999999 999999999764
No 357
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=90.29 E-value=0.23 Score=47.41 Aligned_cols=35 Identities=20% Similarity=0.200 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...|.|||.|-.|...|..|++ .|++|+++++++.
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~~-~G~~V~~~dr~~~ 49 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMTE-WPGGVTVYDIRIE 49 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHTT-STTCEEEECSSTT
T ss_pred CCeEEEECcCHHHHHHHHHHHH-CCCeEEEEeCCHH
Confidence 3579999999999999999999 9999999998754
No 358
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=90.24 E-value=0.22 Score=47.68 Aligned_cols=34 Identities=24% Similarity=0.395 Sum_probs=31.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||.|-.|...|..|++ .|++|+++++++
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~ 40 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCLR-AGLSTWGADLNP 40 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCeEEEEECCH
Confidence 3579999999999999999999 999999999764
No 359
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=90.17 E-value=0.24 Score=48.82 Aligned_cols=33 Identities=24% Similarity=0.286 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|+|+|+|.+|+.+|..|+. .|.+|+++++.+
T Consensus 168 ~~VlViGaGgvG~~aa~~a~~-~Ga~V~v~dr~~ 200 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAVG-LGAQVQIFDINV 200 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 579999999999999999999 999999999753
No 360
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=90.10 E-value=0.25 Score=46.91 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=30.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||.|-.|...|..|++ .|++|++++|++
T Consensus 2 ~~i~iIG~G~mG~~~a~~l~~-~G~~V~~~dr~~ 34 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNLVK-AGCSVTIWNRSP 34 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSG
T ss_pred CEEEEEeecHHHHHHHHHHHH-CCCeEEEEcCCH
Confidence 369999999999999999999 999999999864
No 361
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=89.97 E-value=0.27 Score=47.68 Aligned_cols=33 Identities=24% Similarity=0.258 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHH-HHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLR-LAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~-~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||.|.+|++ +|..|.+ +|++|.+.|+.+
T Consensus 5 ~~i~~iGiGg~Gms~~A~~L~~-~G~~V~~~D~~~ 38 (326)
T 3eag_A 5 KHIHIIGIGGTFMGGLAAIAKE-AGFEVSGCDAKM 38 (326)
T ss_dssp CEEEEESCCSHHHHHHHHHHHH-TTCEEEEEESSC
T ss_pred cEEEEEEECHHHHHHHHHHHHh-CCCEEEEEcCCC
Confidence 46999999999996 8888999 999999999764
No 362
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=89.84 E-value=0.16 Score=46.26 Aligned_cols=34 Identities=26% Similarity=0.385 Sum_probs=30.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEE-EcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCC-VDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~v-iE~~~ 119 (503)
...|.|||+|-.|.+.|..|++ .|++|++ ++|++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~~-~g~~V~~v~~r~~ 57 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFTA-AQIPAIIANSRGP 57 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHHH-TTCCEEEECTTCG
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCEEEEEECCCH
Confidence 4679999999999999999999 9999999 88754
No 363
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=89.83 E-value=0.29 Score=46.97 Aligned_cols=32 Identities=25% Similarity=0.277 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
.|+|||+|-.|..+|..|+. .|+ +|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~-~g~~~eV~L~D~~~ 35 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALVL-RGSCSELVLVDRDE 35 (304)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCH
Confidence 58999999999999999999 998 999999753
No 364
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=89.73 E-value=0.32 Score=46.88 Aligned_cols=32 Identities=19% Similarity=0.361 Sum_probs=29.0
Q ss_pred cEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~ 119 (503)
.|+|||+|-.|..+|..|++ . |.+|+++|+++
T Consensus 2 kI~VIGaG~vG~~la~~la~-~~~g~~V~l~D~~~ 35 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAE-KQLARELVLLDVVE 35 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSSS
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCh
Confidence 58999999999999999998 6 78999999864
No 365
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=89.69 E-value=0.33 Score=46.86 Aligned_cols=34 Identities=29% Similarity=0.345 Sum_probs=30.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
....|.|||+|..|..+|..|+. .|+ .|+++|+.
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~~-~g~~~v~l~D~~ 41 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLAQ-KELADVVLVDIP 41 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCG
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-CCCCeEEEEecc
Confidence 34579999999999999999999 999 99999974
No 366
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=89.60 E-value=0.14 Score=46.93 Aligned_cols=33 Identities=15% Similarity=0.204 Sum_probs=29.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.++|+|+|..|..+|..|.+ .|+ |+++|+++
T Consensus 9 ~~~viI~G~G~~G~~la~~L~~-~g~-v~vid~~~ 41 (234)
T 2aef_A 9 SRHVVICGWSESTLECLRELRG-SEV-FVLAEDEN 41 (234)
T ss_dssp -CEEEEESCCHHHHHHHHHSTT-SEE-EEEESCGG
T ss_pred CCEEEEECCChHHHHHHHHHHh-CCe-EEEEECCH
Confidence 3469999999999999999999 999 99999764
No 367
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=89.60 E-value=0.21 Score=50.68 Aligned_cols=32 Identities=31% Similarity=0.319 Sum_probs=29.9
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|.|||+|-.|+.+|..|++ .|++|+++|+++
T Consensus 2 kI~VIG~G~vG~~~A~~la~-~G~~V~~~d~~~ 33 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLSA-RGHEVIGVDVSS 33 (436)
T ss_dssp EEEEECCSTTHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCEEEEEECCH
Confidence 58999999999999999999 999999999864
No 368
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=89.59 E-value=0.38 Score=46.58 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
...|+|||+|..|.++|..|+. .|+ +|+++|..+
T Consensus 5 ~~kI~iiGaG~vG~~~a~~l~~-~~~~~v~l~Di~~ 39 (321)
T 3p7m_A 5 RKKITLVGAGNIGGTLAHLALI-KQLGDVVLFDIAQ 39 (321)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCceEEEEeCCh
Confidence 4679999999999999999999 888 999999764
No 369
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=89.44 E-value=0.28 Score=46.75 Aligned_cols=33 Identities=21% Similarity=0.342 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|..|...|..|++ .|++|.++++++
T Consensus 6 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~ 38 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLLK-AGYSLVVSDRNP 38 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-TTCEEEEECSCH
T ss_pred ceEEEECchHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 579999999999999999999 999999999753
No 370
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=89.34 E-value=0.34 Score=47.58 Aligned_cols=34 Identities=24% Similarity=0.361 Sum_probs=31.0
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
.|+|+|||..|..+|+++.+ .|++|+++|.++..
T Consensus 3 ~I~ilGgg~~g~~~~~~Ak~-~G~~vv~vd~~~~~ 36 (363)
T 4ffl_A 3 TICLVGGKLQGFEAAYLSKK-AGMKVVLVDKNPQA 36 (363)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEEESCTTC
T ss_pred EEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCCCC
Confidence 58999999999999999999 99999999987654
No 371
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=89.29 E-value=0.37 Score=46.21 Aligned_cols=34 Identities=29% Similarity=0.515 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||.|..|...|..|++ .|++|++++|++
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~~-~G~~V~~~dr~~ 42 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLLK-QGKRVAIWNRSP 42 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred CCeEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 4579999999999999999999 999999999764
No 372
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=89.28 E-value=3 Score=42.56 Aligned_cols=41 Identities=12% Similarity=0.156 Sum_probs=33.0
Q ss_pred cEEE-EeEEEEEEEeCCE------EEEEeC--CC---cEEEeceEEecCCCCc
Q 010693 187 VKFH-KAKVWHVNHQEFE------SSIVCD--DG---NEIKASLIVDASGFAS 227 (503)
Q Consensus 187 v~~~-~~~v~~i~~~~~~------~~v~~~--~g---~~i~a~~vI~A~G~~s 227 (503)
++++ +++|++|..++++ +.|++. +| ++++||.||.|.....
T Consensus 256 ~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~ 308 (504)
T 1sez_A 256 DELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCD 308 (504)
T ss_dssp TTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHH
T ss_pred ceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHH
Confidence 6888 9999999988776 777664 45 5789999999998653
No 373
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=89.15 E-value=0.37 Score=46.51 Aligned_cols=35 Identities=26% Similarity=0.399 Sum_probs=31.5
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
....|.|||.|..|.+.|..|++ .|+ +|+++|+++
T Consensus 32 ~~~kI~IIG~G~mG~slA~~l~~-~G~~~~V~~~dr~~ 68 (314)
T 3ggo_A 32 SMQNVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINP 68 (314)
T ss_dssp SCSEEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCH
T ss_pred CCCEEEEEeeCHHHHHHHHHHHh-CCCCCEEEEEECCH
Confidence 34679999999999999999999 999 999999764
No 374
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=89.03 E-value=0.39 Score=43.44 Aligned_cols=34 Identities=26% Similarity=0.325 Sum_probs=30.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||+|-.|...|..|++ .|++|++++|++
T Consensus 28 ~~~I~iiG~G~~G~~la~~l~~-~g~~V~~~~r~~ 61 (215)
T 2vns_A 28 APKVGILGSGDFARSLATRLVG-SGFKVVVGSRNP 61 (215)
T ss_dssp -CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSH
T ss_pred CCEEEEEccCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 3579999999999999999999 999999999753
No 375
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=88.99 E-value=0.33 Score=47.96 Aligned_cols=33 Identities=24% Similarity=0.359 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|+|+|+|..|+.+|..|+. .|.+|+++|+++
T Consensus 167 ~~V~ViGaG~iG~~~a~~l~~-~Ga~V~~~d~~~ 199 (369)
T 2eez_A 167 ASVVILGGGTVGTNAAKIALG-MGAQVTILDVNH 199 (369)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 579999999999999999999 999999999753
No 376
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=88.96 E-value=0.29 Score=47.24 Aligned_cols=33 Identities=21% Similarity=0.382 Sum_probs=29.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|+|||+|--|.+.|..|++ .|++|+++ +++
T Consensus 19 ~~kI~IiGaGa~G~~~a~~L~~-~G~~V~l~-~~~ 51 (318)
T 3hwr_A 19 GMKVAIMGAGAVGCYYGGMLAR-AGHEVILI-ARP 51 (318)
T ss_dssp -CEEEEESCSHHHHHHHHHHHH-TTCEEEEE-CCH
T ss_pred CCcEEEECcCHHHHHHHHHHHH-CCCeEEEE-EcH
Confidence 3569999999999999999999 99999999 653
No 377
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=88.96 E-value=0.4 Score=47.34 Aligned_cols=36 Identities=25% Similarity=0.397 Sum_probs=32.1
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
+-....|+|+|||.||..+|..|.. .|. +|.++|++
T Consensus 185 ~l~d~kVVi~GAGaAG~~iA~ll~~-~Ga~~I~v~D~~ 221 (398)
T 2a9f_A 185 SLDEVSIVVNGGGSAGLSITRKLLA-AGATKVTVVDKF 221 (398)
T ss_dssp CTTSCEEEEECCSHHHHHHHHHHHH-HTCCEEEEEETT
T ss_pred CCCccEEEEECCCHHHHHHHHHHHH-cCCCeEEEEECC
Confidence 3446889999999999999999999 999 99999975
No 378
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=88.92 E-value=0.38 Score=46.80 Aligned_cols=34 Identities=15% Similarity=0.275 Sum_probs=31.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
....|.|||+|--|.+.|..|++ .|++|++++|.
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~~-~G~~V~~~~r~ 46 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLHE-NGEEVILWARR 46 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSS
T ss_pred cCCcEEEECcCHHHHHHHHHHHh-CCCeEEEEeCC
Confidence 45789999999999999999999 99999999975
No 379
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=88.92 E-value=0.38 Score=44.81 Aligned_cols=35 Identities=20% Similarity=0.309 Sum_probs=31.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCC----CcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHS----VKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G----~~V~viE~~~~ 120 (503)
...|.|||+|--|.+.|..|++ .| ++|.+++|.+.
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~~-~g~~~~~~v~~~~~~~~ 42 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIAN-ANIIKKENLFYYGPSKK 42 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHHH-HTSSCGGGEEEECSSCC
T ss_pred CCEEEEECcCHHHHHHHHHHHH-CCCCCCCeEEEEeCCcc
Confidence 3579999999999999999999 89 79999998764
No 380
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=88.91 E-value=0.58 Score=44.67 Aligned_cols=33 Identities=18% Similarity=0.331 Sum_probs=30.5
Q ss_pred CcEEEEC-CCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIG-TGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVG-gGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.||| +|-.|.+.|..|++ .|++|.++++++
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~~-~G~~V~~~~~~~ 55 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLRA-SGYPISILDRED 55 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHHT-TTCCEEEECTTC
T ss_pred CEEEEEcCCCHHHHHHHHHHHh-CCCeEEEEECCc
Confidence 4699999 99999999999999 999999999764
No 381
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=88.78 E-value=0.38 Score=46.98 Aligned_cols=35 Identities=26% Similarity=0.271 Sum_probs=31.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|.|||.|.-|.+.|..|++ .|++|.++++++
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~~-~G~~V~~~dr~~ 41 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLHA-ANHSVFGYNRSR 41 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred CCCEEEEEeecHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 34569999999999999999999 999999999764
No 382
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=88.73 E-value=0.33 Score=47.74 Aligned_cols=34 Identities=15% Similarity=0.258 Sum_probs=31.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||.|-.|...|..|++ .|++|+++++.+
T Consensus 22 ~mkIgiIGlG~mG~~~A~~L~~-~G~~V~v~dr~~ 55 (358)
T 4e21_A 22 SMQIGMIGLGRMGADMVRRLRK-GGHECVVYDLNV 55 (358)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CCEEEEECchHHHHHHHHHHHh-CCCEEEEEeCCH
Confidence 3689999999999999999999 999999999764
No 383
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=88.72 E-value=0.43 Score=45.89 Aligned_cols=33 Identities=21% Similarity=0.325 Sum_probs=29.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
..|+|||+|-.|..+|..|+. .|+ +|+++|.++
T Consensus 3 ~kI~VIGaG~vG~~~a~~la~-~g~~~v~L~Di~~ 36 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLAA-KELGDIVLLDIVE 36 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSSS
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCeEEEEeCCc
Confidence 479999999999999999999 897 999999753
No 384
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=88.71 E-value=0.25 Score=46.90 Aligned_cols=32 Identities=19% Similarity=0.261 Sum_probs=30.1
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|.|||.|-.|...|..|++ .|++|++++|++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~~-~G~~V~~~dr~~ 34 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLVR-AGFDVTVWNRNP 34 (287)
T ss_dssp CEEEECCSTTHHHHHHHHHH-HTCCEEEECSSG
T ss_pred eEEEEccCHHHHHHHHHHHH-CCCeEEEEcCCH
Confidence 69999999999999999999 999999999865
No 385
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=88.64 E-value=0.42 Score=48.97 Aligned_cols=35 Identities=23% Similarity=0.430 Sum_probs=32.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..+|.|||.|--|..+|..|++ .|++|+++++.+.
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L~~-~G~~V~v~dr~~~ 38 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNMND-HGFVVCAFNRTVS 38 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSTH
T ss_pred CCEEEEEChhHHHHHHHHHHHH-CCCEEEEEeCCHH
Confidence 4679999999999999999999 9999999998753
No 386
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=88.54 E-value=0.32 Score=47.95 Aligned_cols=32 Identities=25% Similarity=0.447 Sum_probs=30.0
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|.|||+|-.|.+.|..|++ .|++|++++|++
T Consensus 17 kI~iIG~G~mG~~la~~L~~-~G~~V~~~~r~~ 48 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLSK-KCREVCVWHMNE 48 (366)
T ss_dssp EEEEECCSHHHHHHHHHHTT-TEEEEEEECSCH
T ss_pred eEEEECCCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 79999999999999999999 999999999753
No 387
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=88.45 E-value=0.35 Score=49.66 Aligned_cols=36 Identities=19% Similarity=0.250 Sum_probs=31.4
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
+.+.+|.|||+|.-|..+|..|++ .|++|++++|.+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La~-~G~~V~v~~r~~ 48 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIES-RGYTVSIFNRSR 48 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHHT-TTCCEEEECSSH
T ss_pred cCCCeEEEEccHHHHHHHHHHHHh-CCCeEEEEeCCH
Confidence 345679999999999999999999 999999999864
No 388
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=88.40 E-value=0.47 Score=44.55 Aligned_cols=34 Identities=21% Similarity=0.400 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.++|+|+|-+|.++|..|++ .|.+|+|+.|.+
T Consensus 118 ~k~vlvlGaGGaaraia~~L~~-~G~~v~V~nRt~ 151 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELKK-QGLQVSVLNRSS 151 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 4579999999999999999999 999999999864
No 389
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=88.30 E-value=0.46 Score=45.93 Aligned_cols=34 Identities=26% Similarity=0.315 Sum_probs=30.5
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
...|+|||+|-.|..+|+.|+. .|+ .|+++|.++
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~~-~~~~~ev~L~Di~~ 42 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMAL-RQTANELVLIDVFK 42 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHHH-TTCSSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCCh
Confidence 4689999999999999999999 888 899999764
No 390
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=88.30 E-value=0.4 Score=47.58 Aligned_cols=33 Identities=30% Similarity=0.471 Sum_probs=30.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
.-.|+|+|+|..|+.+|..+.. .|.+|+++|+.
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~~-~Ga~V~~~d~~ 200 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIANG-MGATVTVLDIN 200 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCEEEEEeCC
Confidence 4579999999999999999999 99999999975
No 391
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=88.27 E-value=0.43 Score=44.91 Aligned_cols=32 Identities=19% Similarity=0.278 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
-.++|+|+|-+|.++|..|++ .|.+|+|++|.
T Consensus 120 k~vlViGaGg~g~a~a~~L~~-~G~~V~v~~R~ 151 (271)
T 1nyt_A 120 LRILLIGAGGASRGVLLPLLS-LDCAVTITNRT 151 (271)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSS
T ss_pred CEEEEECCcHHHHHHHHHHHH-cCCEEEEEECC
Confidence 469999999999999999999 99999999875
No 392
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=88.13 E-value=0.35 Score=49.28 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=29.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
-.++|+|+|..|..+|..|+. .|.+|++.|++
T Consensus 266 KtVvVtGaGgIG~aiA~~Laa-~GA~Viv~D~~ 297 (488)
T 3ond_A 266 KVAVVAGYGDVGKGCAAALKQ-AGARVIVTEID 297 (488)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSC
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCEEEEEcCC
Confidence 469999999999999999999 99999999964
No 393
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=88.11 E-value=0.47 Score=48.70 Aligned_cols=33 Identities=36% Similarity=0.476 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|.-|...|..|++ .|++|+++|+++
T Consensus 6 ~kVgVIGaG~MG~~IA~~la~-aG~~V~l~D~~~ 38 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAAS-HGHQVLLYDISA 38 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEECSCH
T ss_pred CEEEEECcCHHHHHHHHHHHH-CCCeEEEEECCH
Confidence 469999999999999999999 999999999764
No 394
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=88.03 E-value=0.41 Score=44.95 Aligned_cols=33 Identities=12% Similarity=0.253 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|+|.|+|..|..++..|.+ .|++|+++.|++
T Consensus 6 ~~ilVtGaG~iG~~l~~~L~~-~g~~V~~~~r~~ 38 (286)
T 3ius_A 6 GTLLSFGHGYTARVLSRALAP-QGWRIIGTSRNP 38 (286)
T ss_dssp CEEEEETCCHHHHHHHHHHGG-GTCEEEEEESCG
T ss_pred CcEEEECCcHHHHHHHHHHHH-CCCEEEEEEcCh
Confidence 579999999999999999999 999999999864
No 395
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=87.96 E-value=0.42 Score=46.13 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=30.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccCC-CcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHS-VKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G-~~V~viE~~~ 119 (503)
..|.|||.|-.|...|..|++ .| ++|+++++.+
T Consensus 25 m~IgvIG~G~mG~~lA~~L~~-~G~~~V~~~dr~~ 58 (317)
T 4ezb_A 25 TTIAFIGFGEAAQSIAGGLGG-RNAARLAAYDLRF 58 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCSEEEEECGGG
T ss_pred CeEEEECccHHHHHHHHHHHH-cCCCeEEEEeCCC
Confidence 579999999999999999999 99 9999999865
No 396
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=87.95 E-value=0.41 Score=45.71 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|..|...|..|++ .|++|+++++++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~~-~G~~V~~~d~~~ 36 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLLK-AGYLLNVFDLVQ 36 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-TTCEEEEECSSH
T ss_pred CEEEEEeecHHHHHHHHHHHh-CCCeEEEEcCCH
Confidence 579999999999999999999 999999999754
No 397
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=87.94 E-value=0.49 Score=48.76 Aligned_cols=35 Identities=23% Similarity=0.402 Sum_probs=32.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|.|||.|.-|..+|..|++ +|++|++++|.+
T Consensus 9 ~~~~IgvIGlG~MG~~lA~~La~-~G~~V~v~dr~~ 43 (497)
T 2p4q_A 9 MSADFGLIGLAVMGQNLILNAAD-HGFTVCAYNRTQ 43 (497)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSS
T ss_pred CCCCEEEEeeHHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 45689999999999999999999 999999999865
No 398
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=87.81 E-value=0.52 Score=42.22 Aligned_cols=32 Identities=22% Similarity=0.323 Sum_probs=29.4
Q ss_pred cEEEEC-CCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIG-TGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVG-gGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|+||| +|-.|...|..|++ .|++|.+++|++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~-~g~~V~~~~r~~ 34 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLAT-LGHEIVVGSRRE 34 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHT-TTCEEEEEESSH
T ss_pred eEEEEcCCCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 589999 99999999999999 999999999753
No 399
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=87.76 E-value=0.36 Score=46.70 Aligned_cols=30 Identities=23% Similarity=0.274 Sum_probs=28.6
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDP 117 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~ 117 (503)
.|.|||+|-.|...|..|++ .|++|++++|
T Consensus 2 ~I~iiG~G~mG~~~a~~L~~-~g~~V~~~~r 31 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLVD-NGNEVRIWGT 31 (335)
T ss_dssp EEEEESCCHHHHHHHHHHHH-HCCEEEEECC
T ss_pred EEEEECcCHHHHHHHHHHHh-CCCeEEEEEc
Confidence 58999999999999999999 9999999997
No 400
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=87.64 E-value=0.31 Score=46.71 Aligned_cols=31 Identities=13% Similarity=0.278 Sum_probs=29.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccC-----C-CcEEEEcC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH-----S-VKVCCVDP 117 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~-----G-~~V~viE~ 117 (503)
..|.|||+|..|.+.|..|++ . | ++|++++|
T Consensus 9 m~I~iiG~G~mG~~~a~~L~~-~~~~~~g~~~V~~~~r 45 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLAL-RAAATDGLLEVSWIAR 45 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-HHHHTTSSEEEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHh-CccccCCCCCEEEEEc
Confidence 479999999999999999999 8 9 99999986
No 401
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=87.61 E-value=0.59 Score=43.95 Aligned_cols=34 Identities=26% Similarity=0.446 Sum_probs=31.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..|+|.|+|..|..++..|.+ .|++|+++.|.+.
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~~-~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLTA-QGHEVTGLRRSAQ 37 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEEECTTS
T ss_pred CcEEEECCCHHHHHHHHHHHH-CCCEEEEEeCCcc
Confidence 469999999999999999999 9999999998754
No 402
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=87.56 E-value=0.5 Score=45.80 Aligned_cols=33 Identities=21% Similarity=0.352 Sum_probs=29.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
...|+|||+|..|.++|..|+. .|+ .++++|..
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~~-~~~~~~l~l~D~~ 39 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALIN-QGITDELVVIDVN 39 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCceEEEEecc
Confidence 4579999999999999999999 887 89999964
No 403
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=87.56 E-value=0.47 Score=43.21 Aligned_cols=36 Identities=11% Similarity=0.189 Sum_probs=31.1
Q ss_pred CCcCcEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 83 RIRYDVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 83 ~~~~DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.....|+|.|| |-.|..+|..|++ .|++|+++.|++
T Consensus 19 l~~~~ilVtGatG~iG~~l~~~L~~-~G~~V~~~~R~~ 55 (236)
T 3e8x_A 19 FQGMRVLVVGANGKVARYLLSELKN-KGHEPVAMVRNE 55 (236)
T ss_dssp --CCEEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSG
T ss_pred cCCCeEEEECCCChHHHHHHHHHHh-CCCeEEEEECCh
Confidence 34457999998 9999999999999 999999999864
No 404
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=87.31 E-value=0.56 Score=44.10 Aligned_cols=32 Identities=19% Similarity=0.270 Sum_probs=29.5
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|.|||+|..|.+.|..|++ .|++|+++++++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~ 33 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLRR-RGHYLIGVSRQQ 33 (279)
T ss_dssp EEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred EEEEEcCcHHHHHHHHHHHH-CCCEEEEEECCH
Confidence 58999999999999999999 999999999753
No 405
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=87.29 E-value=0.55 Score=44.88 Aligned_cols=32 Identities=13% Similarity=0.261 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
-.++|+|+|.+|.++|..|++ .|. +|+|+.|.
T Consensus 142 ~~vlVlGaGg~g~aia~~L~~-~G~~~V~v~nR~ 174 (297)
T 2egg_A 142 KRILVIGAGGGARGIYFSLLS-TAAERIDMANRT 174 (297)
T ss_dssp CEEEEECCSHHHHHHHHHHHT-TTCSEEEEECSS
T ss_pred CEEEEECcHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 469999999999999999999 998 99999975
No 406
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=87.19 E-value=0.44 Score=45.89 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=30.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
....|.|||.|..|...|..|++ .|+ +|+++++.
T Consensus 23 ~~~~I~iIG~G~mG~~~A~~L~~-~G~~~V~~~dr~ 57 (312)
T 3qsg_A 23 NAMKLGFIGFGEAASAIASGLRQ-AGAIDMAAYDAA 57 (312)
T ss_dssp --CEEEEECCSHHHHHHHHHHHH-HSCCEEEEECSS
T ss_pred CCCEEEEECccHHHHHHHHHHHH-CCCCeEEEEcCC
Confidence 34689999999999999999999 999 99999985
No 407
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=87.11 E-value=0.51 Score=45.56 Aligned_cols=35 Identities=23% Similarity=0.376 Sum_probs=30.6
Q ss_pred CCcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 83 RIRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 83 ~~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
+....|+|||+|-.|.++|..|+. .|+ .++++|..
T Consensus 4 m~~~KI~IIGaG~vG~~la~~l~~-~~~~~ei~L~Di~ 40 (317)
T 3d0o_A 4 FKGNKVVLIGNGAVGSSYAFSLVN-QSIVDELVIIDLD 40 (317)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHH-HCSCSEEEEECSC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCC
Confidence 445789999999999999999999 785 89999964
No 408
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=87.08 E-value=0.58 Score=45.16 Aligned_cols=34 Identities=18% Similarity=0.342 Sum_probs=29.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
....|+|||+|..|.++|+.|+. .|+ .|+++|.+
T Consensus 5 ~~~kI~IIGaG~vG~sla~~l~~-~~~~~ev~l~Di~ 40 (316)
T 1ldn_A 5 GGARVVVIGAGFVGASYVFALMN-QGIADEIVLIDAN 40 (316)
T ss_dssp TSCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSS
T ss_pred CCCEEEEECcCHHHHHHHHHHHh-CCCCCEEEEEeCC
Confidence 34689999999999999999998 776 79999975
No 409
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=86.98 E-value=0.43 Score=48.82 Aligned_cols=33 Identities=21% Similarity=0.321 Sum_probs=30.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~ 119 (503)
..|.|||+|-.|+..|..|++ . |++|+++|+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~-~g~G~~V~~~d~~~ 40 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAH-MCPEIRVTVVDVNE 40 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCH
T ss_pred cEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCH
Confidence 579999999999999999999 8 89999999864
No 410
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=86.96 E-value=0.21 Score=45.89 Aligned_cols=32 Identities=25% Similarity=0.335 Sum_probs=29.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDP 117 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~ 117 (503)
...|.|||+|..|.++|..|++ +|++|+++++
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~~-~G~~V~~~~~ 37 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLDS-VGHYVTVLHA 37 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHHH-TTCEEEECSS
T ss_pred CcEEEEEeeCHHHHHHHHHHHH-CCCEEEEecC
Confidence 3579999999999999999999 9999999986
No 411
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=86.94 E-value=0.6 Score=45.11 Aligned_cols=33 Identities=24% Similarity=0.370 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCC----CcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHS----VKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G----~~V~viE~~~ 119 (503)
..|.|||+|-.|.+.|..|++ .| ++|++++|.+
T Consensus 23 mkI~iIG~G~mG~ala~~L~~-~G~~~~~~V~v~~r~~ 59 (322)
T 2izz_A 23 MSVGFIGAGQLAFALAKGFTA-AGVLAAHKIMASSPDM 59 (322)
T ss_dssp CCEEEESCSHHHHHHHHHHHH-TTSSCGGGEEEECSCT
T ss_pred CEEEEECCCHHHHHHHHHHHH-CCCCCcceEEEECCCc
Confidence 479999999999999999999 99 8999999864
No 412
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=86.93 E-value=0.53 Score=46.38 Aligned_cols=34 Identities=26% Similarity=0.410 Sum_probs=31.2
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
....|+|+|||-+|..+|..|.. .|. +|.++|+.
T Consensus 191 ~~~kVVv~GAGaAG~~iAkll~~-~G~~~I~v~Dr~ 225 (388)
T 1vl6_A 191 EEVKVVVNGIGAAGYNIVKFLLD-LGVKNVVAVDRK 225 (388)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHH-HTCCEEEEEETT
T ss_pred CCcEEEEECCCHHHHHHHHHHHh-CCCCeEEEEECC
Confidence 46789999999999999999999 998 89999975
No 413
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=86.93 E-value=0.68 Score=43.76 Aligned_cols=34 Identities=15% Similarity=0.362 Sum_probs=30.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC---cEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV---KVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~---~V~viE~~~ 119 (503)
...|.|||+|--|.+.|..|++ .|+ +|++++|++
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~~-~g~~~~~V~v~dr~~ 39 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLIA-NGYDPNRICVTNRSL 39 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHHH-TTCCGGGEEEECSSS
T ss_pred CCEEEEEcccHHHHHHHHHHHH-CCCCCCeEEEEeCCH
Confidence 3569999999999999999999 999 999999864
No 414
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=86.92 E-value=0.4 Score=45.82 Aligned_cols=33 Identities=15% Similarity=0.279 Sum_probs=27.4
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.|.+||-|.-|...|..|.+ +|++|++++|.+.
T Consensus 7 kIgfIGLG~MG~~mA~~L~~-~G~~V~v~dr~~~ 39 (297)
T 4gbj_A 7 KIAFLGLGNLGTPIAEILLE-AGYELVVWNRTAS 39 (297)
T ss_dssp EEEEECCSTTHHHHHHHHHH-TTCEEEEC-----
T ss_pred cEEEEecHHHHHHHHHHHHH-CCCeEEEEeCCHH
Confidence 59999999999999999999 9999999998764
No 415
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=86.75 E-value=0.57 Score=49.14 Aligned_cols=35 Identities=23% Similarity=0.268 Sum_probs=32.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
-.++|||+|..|..+|..|.+ .|++|+++|+++..
T Consensus 349 ~~viIiG~G~~G~~la~~L~~-~g~~v~vid~d~~~ 383 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLDR-KPVPFILIDRQESP 383 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTCCEEEEESSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHH-CCCCEEEEECChHH
Confidence 679999999999999999999 99999999988764
No 416
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=86.71 E-value=0.56 Score=45.40 Aligned_cols=36 Identities=25% Similarity=0.379 Sum_probs=30.9
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
++....|+|||+|..|.++|+.|+. .|+ .++++|..
T Consensus 6 ~~~~~kV~ViGaG~vG~~~a~~l~~-~~~~~el~l~D~~ 43 (326)
T 3vku_A 6 DKDHQKVILVGDGAVGSSYAYAMVL-QGIAQEIGIVDIF 43 (326)
T ss_dssp -CCCCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSC
T ss_pred cCCCCEEEEECCCHHHHHHHHHHHh-CCCCCeEEEEeCC
Confidence 4455689999999999999999999 887 89999963
No 417
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=86.67 E-value=0.32 Score=47.55 Aligned_cols=34 Identities=24% Similarity=0.219 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCC-------CcEEEEcCCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHS-------VKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G-------~~V~viE~~~~ 120 (503)
..|.|||+|-.|.+.|..|++ .| ++|+++++++.
T Consensus 9 mkI~iIG~G~mG~~~a~~l~~-~g~~~~~~~~~V~~~~r~~~ 49 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVGG-NAAQLAQFDPRVTMWVFEED 49 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHHH-HHHHCTTEEEEEEEECCCCB
T ss_pred CeEEEECCCHHHHHHHHHHHh-cCCcccCCCCeEEEEEcChh
Confidence 479999999999999999999 89 89999998754
No 418
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=86.66 E-value=0.49 Score=45.72 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=29.4
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
.|+|||+|-.|.++|..|++ .|+ +|+++|+++
T Consensus 2 kI~VIGaG~~G~~la~~l~~-~g~~~~V~l~D~~~ 35 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALLM-KGFAREMVLIDVDK 35 (319)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCeEEEEeCCh
Confidence 58999999999999999999 999 999999753
No 419
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=86.62 E-value=0.5 Score=47.32 Aligned_cols=34 Identities=18% Similarity=0.292 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|||.|..|..+|..|.. .|.+|+++|+++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lra-~Ga~Viv~D~dp 253 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALKA-MGSIVYVTEIDP 253 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHH-CCCEEEEEeCCh
Confidence 3579999999999999999999 999999999753
No 420
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=86.60 E-value=0.62 Score=47.82 Aligned_cols=33 Identities=24% Similarity=0.462 Sum_probs=30.7
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.+|.|||+|..|...|..|++ .|++|++++|.+
T Consensus 3 m~IgvIG~G~mG~~lA~~La~-~G~~V~v~dr~~ 35 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMND-HGFVVCAFNRTV 35 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-TTCCEEEECSST
T ss_pred CeEEEEChHHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 469999999999999999999 999999999864
No 421
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=86.58 E-value=0.56 Score=44.47 Aligned_cols=32 Identities=28% Similarity=0.363 Sum_probs=29.6
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|.|||+|-.|...|..|++ .|++|+++++++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~-~g~~V~~~~~~~ 33 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLMK-HGYPLIIYDVFP 33 (296)
T ss_dssp CEEEECCSTTHHHHHHHHHH-TTCCEEEECSST
T ss_pred eEEEEeccHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 58999999999999999999 999999999754
No 422
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=86.55 E-value=0.42 Score=45.59 Aligned_cols=32 Identities=19% Similarity=0.179 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
.|+|||+|-.|.++|..|++ .|+ +|+++|+.+
T Consensus 2 kI~ViGaG~vG~~la~~l~~-~~~~~~v~L~D~~~ 35 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCLL-NLDVDEIALVDIAE 35 (294)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HSCCSEEEEECSSH
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCeEEEEECCh
Confidence 58999999999999999999 888 899999753
No 423
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=86.54 E-value=0.53 Score=45.09 Aligned_cols=34 Identities=18% Similarity=0.398 Sum_probs=30.2
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
...|+|||+|-.|..+|+.|+. .|+ .|+++|..+
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~~-~g~~~ev~L~Di~~ 49 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAISA-KGIADRLVLLDLSE 49 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECCC-
T ss_pred CCEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEcCCc
Confidence 4679999999999999999999 898 999999765
No 424
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=86.21 E-value=0.57 Score=47.18 Aligned_cols=33 Identities=24% Similarity=0.305 Sum_probs=29.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||+|-.|+.+|..|++ |++|+++|+++
T Consensus 36 ~mkIaVIGlG~mG~~lA~~La~--G~~V~~~D~~~ 68 (432)
T 3pid_A 36 FMKITISGTGYVGLSNGVLIAQ--NHEVVALDIVQ 68 (432)
T ss_dssp CCEEEEECCSHHHHHHHHHHHT--TSEEEEECSCH
T ss_pred CCEEEEECcCHHHHHHHHHHHc--CCeEEEEecCH
Confidence 3579999999999999999987 99999999864
No 425
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=86.16 E-value=0.56 Score=48.15 Aligned_cols=34 Identities=21% Similarity=0.321 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~ 119 (503)
...|.|||+|-.|+.+|..|++ . |++|+++|+++
T Consensus 9 ~mkI~VIG~G~vG~~~A~~La~-~g~g~~V~~~D~~~ 44 (481)
T 2o3j_A 9 VSKVVCVGAGYVGGPTCAMIAH-KCPHITVTVVDMNT 44 (481)
T ss_dssp CCEEEEECCSTTHHHHHHHHHH-HCTTSEEEEECSCH
T ss_pred CCEEEEECCCHHHHHHHHHHHh-cCCCCEEEEEECCH
Confidence 3579999999999999999999 7 79999999764
No 426
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=86.16 E-value=0.56 Score=44.61 Aligned_cols=34 Identities=26% Similarity=0.386 Sum_probs=30.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
....|+|||+|-.|..+|..|++ .|+ +++|+|.+
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~-aGVG~i~lvD~D 69 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTR-CGIGKLLLFDYD 69 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHH-HTCSEEEEECCC
T ss_pred hCCeEEEECcCHHHHHHHHHHHH-cCCCEEEEECCC
Confidence 35789999999999999999999 997 89999965
No 427
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=86.14 E-value=0.54 Score=44.38 Aligned_cols=33 Identities=15% Similarity=0.245 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
-.++|+|+|-+|.++|..|++ .|. +|+|+.|.+
T Consensus 118 k~vlvlGaGg~g~aia~~L~~-~G~~~v~v~~R~~ 151 (277)
T 3don_A 118 AYILILGAGGASKGIANELYK-IVRPTLTVANRTM 151 (277)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-TCCSCCEEECSCG
T ss_pred CEEEEECCcHHHHHHHHHHHH-CCCCEEEEEeCCH
Confidence 469999999999999999999 998 899999764
No 428
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=86.10 E-value=0.53 Score=48.30 Aligned_cols=34 Identities=26% Similarity=0.425 Sum_probs=30.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|||+|..|..+|..|.. .|.+|+++|+++
T Consensus 274 GktV~IiG~G~IG~~~A~~lka-~Ga~Viv~d~~~ 307 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMKG-QGARVSVTEIDP 307 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred cCEEEEEccCHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 3469999999999999999999 999999999753
No 429
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=86.07 E-value=0.65 Score=50.22 Aligned_cols=33 Identities=24% Similarity=0.242 Sum_probs=30.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|.-|...|..|++ .|++|+++|+++
T Consensus 313 ~kV~VIGaG~MG~~iA~~la~-aG~~V~l~D~~~ 345 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALIL-SNYPVILKEVNE 345 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHHT-TTCCEEEECSSH
T ss_pred cEEEEEcCCHhhHHHHHHHHh-CCCEEEEEECCH
Confidence 469999999999999999999 999999999764
No 430
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=85.98 E-value=0.61 Score=44.89 Aligned_cols=32 Identities=38% Similarity=0.542 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
.|+|||+|..|.++|+.|++ .|+ .++++|..+
T Consensus 2 kv~ViGaG~vG~~~a~~l~~-~~~~~el~l~D~~~ 35 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVAR-QDVAKEVVMVDIKD 35 (314)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HTCSSEEEEECSST
T ss_pred EEEEECCCHHHHHHHHHHHh-CCCCCEEEEEeCch
Confidence 58999999999999999999 887 899999754
No 431
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=85.85 E-value=0.7 Score=43.47 Aligned_cols=32 Identities=28% Similarity=0.490 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC--cEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~~ 119 (503)
.|.|||+|..|.+.|..|++ .|+ +|+++++++
T Consensus 3 ~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~ 36 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLRR-SGFKGKIYGYDINP 36 (281)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCCSEEEEECSCH
T ss_pred EEEEEecCHHHHHHHHHHHh-cCCCcEEEEEeCCH
Confidence 58999999999999999999 998 999999753
No 432
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=85.83 E-value=0.77 Score=44.58 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=31.3
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
....|+|||+|-.|..+|..|++ .|+ +++|+|.+.
T Consensus 33 ~~~~VlIvGaGGlGs~va~~La~-aGVg~ItlvD~D~ 68 (340)
T 3rui_A 33 KNTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNGT 68 (340)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCB
T ss_pred hCCEEEEECCCHHHHHHHHHHHH-cCCCEEEEecCCE
Confidence 45789999999999999999999 997 789999764
No 433
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=85.74 E-value=0.9 Score=42.91 Aligned_cols=33 Identities=21% Similarity=0.534 Sum_probs=30.4
Q ss_pred CcEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+ |-.|...|..|++ .|++|++++|++
T Consensus 12 m~I~iIG~tG~mG~~la~~l~~-~g~~V~~~~r~~ 45 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIHD-SAHHLAAIEIAP 45 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHHH-SSSEEEEECCSH
T ss_pred CEEEEECCCCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 47999999 9999999999999 999999999753
No 434
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=85.72 E-value=0.61 Score=43.38 Aligned_cols=32 Identities=13% Similarity=0.293 Sum_probs=29.3
Q ss_pred cEEEECCCHHHHHHHHHHHccCC-CcEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHS-VKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G-~~V~viE~~~ 119 (503)
.|.|||+|-.|...|..|++ .| ++|.+++|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~~-~g~~~v~~~~r~~ 34 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLVK-QGGYRIYIANRGA 34 (263)
T ss_dssp EEEEECCSHHHHHHHHHHHH-HCSCEEEEECSSH
T ss_pred EEEEECchHHHHHHHHHHHH-CCCCeEEEECCCH
Confidence 58999999999999999999 99 9999999753
No 435
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=85.71 E-value=0.51 Score=47.13 Aligned_cols=30 Identities=23% Similarity=0.318 Sum_probs=27.9
Q ss_pred CcEEEECCCHHHHHHHHHHHccC-CCcEEEEc
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRH-SVKVCCVD 116 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~-G~~V~viE 116 (503)
..|.|||+|..|.+.|..|++ . |++|++++
T Consensus 3 mkI~ViGaG~~G~~~a~~La~-~~G~~V~~~~ 33 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAAS-RDGVEVRVLT 33 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTT-STTEEEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHh-CCCCEEEEEe
Confidence 469999999999999999987 6 99999999
No 436
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=85.60 E-value=0.78 Score=46.96 Aligned_cols=34 Identities=21% Similarity=0.264 Sum_probs=31.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..+|.|||+|..|...|..|++ .|++|++++|.+
T Consensus 5 ~~~IgvIG~G~mG~~lA~~L~~-~G~~V~v~dr~~ 38 (474)
T 2iz1_A 5 QANFGVVGMAVMGKNLALNVES-RGYTVAIYNRTT 38 (474)
T ss_dssp TBSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred CCcEEEEeeHHHHHHHHHHHHh-CCCEEEEEcCCH
Confidence 3579999999999999999999 999999999753
No 437
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=85.49 E-value=0.55 Score=44.68 Aligned_cols=33 Identities=24% Similarity=0.303 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|-.|...|..|++ .|++|+++++++
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~~~~ 37 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLLK-EGVTVYAFDLME 37 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHHH-TTCEEEEECSSH
T ss_pred CEEEEECccHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 579999999999999999999 999999999753
No 438
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=85.46 E-value=0.5 Score=46.70 Aligned_cols=34 Identities=15% Similarity=0.216 Sum_probs=31.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCC-------CcEEEEcCCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHS-------VKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G-------~~V~viE~~~~ 120 (503)
..|.|||+|--|.+.|..|++ .| ++|++++|.+.
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~-~G~~~~~~~~~V~~~~r~~~ 62 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGT-NAKNNYLFENEVRMWIRDEF 62 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHH-HHHHCTTBCSCEEEECCSCC
T ss_pred CEEEEECcCHHHHHHHHHHHH-cCCccCCCCCeEEEEECChh
Confidence 469999999999999999999 89 99999998754
No 439
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=85.45 E-value=0.84 Score=40.77 Aligned_cols=32 Identities=28% Similarity=0.456 Sum_probs=29.3
Q ss_pred cEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|+|.|| |-.|..++..|.+ +|++|+++.|++
T Consensus 2 kvlVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~ 34 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKN-RGHEVTAIVRNA 34 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCS
T ss_pred eEEEEcCCchhHHHHHHHHHh-CCCEEEEEEcCc
Confidence 4899996 9999999999999 999999999864
No 440
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=85.40 E-value=0.71 Score=42.87 Aligned_cols=33 Identities=27% Similarity=0.349 Sum_probs=30.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
...|+|||+|-.|..+|..|++ .|+ +++|+|.+
T Consensus 28 ~~~VlvvG~GglG~~va~~La~-~Gvg~i~lvD~d 61 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLAG-AGVGTLVLADDD 61 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHHH-TTCSEEEEECCC
T ss_pred cCcEEEEccCHHHHHHHHHHHH-cCCCeEEEEeCC
Confidence 4689999999999999999999 998 78999965
No 441
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=85.39 E-value=0.82 Score=44.51 Aligned_cols=33 Identities=30% Similarity=0.250 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|-.|.+.|..|++ .|++|+++++.+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~~-~G~~V~~~~~~~ 49 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLKD-SGVDVTVGLRSG 49 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-TTCCEEEECCTT
T ss_pred CEEEEECchHHHHHHHHHHHH-CcCEEEEEECCh
Confidence 359999999999999999999 999999999764
No 442
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=85.38 E-value=0.75 Score=46.86 Aligned_cols=32 Identities=19% Similarity=0.274 Sum_probs=29.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
..|+|||||..|...|..|.+ .|.+|+|+++.
T Consensus 13 ~~vlVvGgG~va~~k~~~L~~-~ga~V~vi~~~ 44 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLLE-AGARLTVNALT 44 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTBEEEEEESS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CcCEEEEEcCC
Confidence 569999999999999999999 99999999963
No 443
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=85.34 E-value=0.74 Score=43.80 Aligned_cols=34 Identities=21% Similarity=0.342 Sum_probs=30.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|.|||+|..|..+|..|.. .|.+|+++++.+
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~~-~G~~V~~~dr~~ 188 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFAA-LGAKVKVGARES 188 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSH
T ss_pred CCEEEEEeeCHHHHHHHHHHHh-CCCEEEEEECCH
Confidence 3579999999999999999999 999999999753
No 444
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=85.26 E-value=1.2 Score=44.18 Aligned_cols=34 Identities=26% Similarity=0.367 Sum_probs=31.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
-.|+|+|+|..|..+|.++.+ .|++|++++..+.
T Consensus 15 k~IlIlG~G~~g~~la~aa~~-~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 15 KTIGIIGGGQLGRMMALAAKE-MGYKIAVLDPTKN 48 (389)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCEEEEEESSTT
T ss_pred CEEEEECCCHHHHHHHHHHHH-cCCEEEEEeCCCC
Confidence 479999999999999999999 9999999997654
No 445
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=85.26 E-value=0.53 Score=47.46 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=30.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|||.|-.|+.+|..|++ +|++|+++|+++
T Consensus 12 ~~~~ViGlGyvGlp~A~~La~-~G~~V~~~D~~~ 44 (431)
T 3ojo_A 12 SKLTVVGLGYIGLPTSIMFAK-HGVDVLGVDINQ 44 (431)
T ss_dssp CEEEEECCSTTHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CccEEEeeCHHHHHHHHHHHH-CCCEEEEEECCH
Confidence 468899999999999999999 999999999864
No 446
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=85.19 E-value=1.1 Score=44.37 Aligned_cols=35 Identities=20% Similarity=0.278 Sum_probs=32.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...++|+|||..|..+|..++. .|++|+|+|.++.
T Consensus 204 ~~rL~IfGAGhva~ala~~a~~-lg~~V~v~D~R~~ 238 (386)
T 2we8_A 204 RPRMLVFGAIDFAAAVAQQGAF-LGYRVTVCDARPV 238 (386)
T ss_dssp CCEEEEECCSTHHHHHHHHHHH-TTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCEEEEECCchh
Confidence 4689999999999999999999 9999999998765
No 447
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=85.16 E-value=0.68 Score=42.98 Aligned_cols=33 Identities=15% Similarity=0.196 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|-.|...|..|++ .|..|.++++++
T Consensus 4 m~i~iiG~G~mG~~~a~~l~~-~g~~v~~~~~~~ 36 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGLKQ-TPHELIISGSSL 36 (259)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-SSCEEEEECSSH
T ss_pred cEEEEECCCHHHHHHHHHHHh-CCCeEEEECCCH
Confidence 479999999999999999999 999999999753
No 448
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=85.14 E-value=0.76 Score=47.10 Aligned_cols=33 Identities=27% Similarity=0.419 Sum_probs=30.3
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.+|.|||+|-.|...|..|++ .|++|++++|.+
T Consensus 2 MkIgVIG~G~mG~~lA~~La~-~G~~V~v~dr~~ 34 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIAE-KGFKVAVFNRTY 34 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred CEEEEEChHHHHHHHHHHHHH-CCCEEEEEeCCH
Confidence 369999999999999999999 999999999753
No 449
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=85.14 E-value=0.56 Score=44.17 Aligned_cols=32 Identities=16% Similarity=0.239 Sum_probs=29.6
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
-.++|+|+|-+|.++|..|++ .|.+|+|+.|.
T Consensus 120 ~~vlvlGaGg~g~a~a~~L~~-~G~~v~v~~R~ 151 (272)
T 1p77_A 120 QHVLILGAGGATKGVLLPLLQ-AQQNIVLANRT 151 (272)
T ss_dssp CEEEEECCSHHHHTTHHHHHH-TTCEEEEEESS
T ss_pred CEEEEECCcHHHHHHHHHHHH-CCCEEEEEECC
Confidence 469999999999999999999 99999999975
No 450
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=85.13 E-value=0.9 Score=43.97 Aligned_cols=33 Identities=21% Similarity=0.290 Sum_probs=30.0
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
...|.|||+|..|..+|+.|+. .|+ .|+++|..
T Consensus 21 ~~kV~ViGaG~vG~~~a~~la~-~g~~~ev~L~Di~ 55 (330)
T 3ldh_A 21 YNKITVVGCDAVGMADAISVLM-KDLADEVALVDVM 55 (330)
T ss_dssp CCEEEEESTTHHHHHHHHHHHH-HCCCSEEEEECSC
T ss_pred CCEEEEECCCHHHHHHHHHHHh-CCCCCeEEEEECC
Confidence 4679999999999999999999 898 89999964
No 451
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=85.12 E-value=0.77 Score=43.85 Aligned_cols=33 Identities=21% Similarity=0.334 Sum_probs=30.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
.-.|.|||+|..|..+|..|.. .|.+|+++++.
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~~-~G~~V~~~d~~ 189 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFAA-LGANVKVGARS 189 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CCEEEEEcccHHHHHHHHHHHH-CCCEEEEEECC
Confidence 4579999999999999999999 99999999975
No 452
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=85.08 E-value=0.69 Score=44.06 Aligned_cols=34 Identities=26% Similarity=0.345 Sum_probs=29.6
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.+-.|.|||+|.-|...|..|+ +|++|+++|+.+
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la--aG~~V~v~d~~~ 44 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA--SKHEVVLQDVSE 44 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH--TTSEEEEECSCH
T ss_pred CCCeEEEEeeCHHHHHHHHHHH--cCCEEEEEECCH
Confidence 3567999999999999999998 599999999764
No 453
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=84.98 E-value=0.81 Score=42.22 Aligned_cols=33 Identities=18% Similarity=0.458 Sum_probs=30.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC----cEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV----KVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~----~V~viE~~~ 119 (503)
..|.|||+|-.|.+.|..|++ .|+ +|.+++|++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~~-~g~~~~~~V~~~~r~~ 39 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMIN-KNIVSSNQIICSDLNT 39 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-TTSSCGGGEEEECSCH
T ss_pred CeEEEECccHHHHHHHHHHHh-CCCCCCCeEEEEeCCH
Confidence 469999999999999999999 998 999999754
No 454
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=84.73 E-value=0.69 Score=43.59 Aligned_cols=32 Identities=16% Similarity=0.281 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
..|+|||+|-+|.++|..|.+ .|.+|++++|.
T Consensus 130 ~~v~iiGaG~~g~aia~~L~~-~g~~V~v~~r~ 161 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALVK-EGAKVFLWNRT 161 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-HTCEEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHH-cCCEEEEEECC
Confidence 469999999999999999999 89999999975
No 455
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=84.72 E-value=0.71 Score=44.30 Aligned_cols=32 Identities=22% Similarity=0.337 Sum_probs=29.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCC--CcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHS--VKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G--~~V~viE~~ 118 (503)
..|+|||+|-.|.++|..|++ .| .+|+++|++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~-~g~~~~V~l~d~~ 35 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA-QGVADDYVFIDAN 35 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSS
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEcCC
Confidence 369999999999999999999 89 689999975
No 456
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=84.70 E-value=0.99 Score=39.71 Aligned_cols=34 Identities=21% Similarity=0.288 Sum_probs=30.6
Q ss_pred CcEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 86 YDVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..|+|.|| |-.|..++..|.+ .|++|+++.|++.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~-~g~~V~~~~r~~~ 38 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQ-AGYEVTVLVRDSS 38 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHH-TTCEEEEEESCGG
T ss_pred CEEEEEcCCcHHHHHHHHHHHH-CCCeEEEEEeChh
Confidence 46999998 9999999999999 9999999998653
No 457
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=84.98 E-value=0.19 Score=45.19 Aligned_cols=36 Identities=25% Similarity=0.220 Sum_probs=31.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
....|.|||+|-.|...|..|.+ .|++|.+++|.+.
T Consensus 18 ~~~~I~iIG~G~mG~~la~~L~~-~G~~V~~~~r~~~ 53 (201)
T 2yjz_A 18 KQGVVCIFGTGDFGKSLGLKMLQ-CGYSVVFGSRNPQ 53 (201)
Confidence 34569999999999999999999 9999999998653
No 458
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=84.49 E-value=0.79 Score=43.44 Aligned_cols=31 Identities=16% Similarity=0.354 Sum_probs=28.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
-.++|+|+|-+|.++|..|++ .| +|++++|.
T Consensus 129 k~vlV~GaGgiG~aia~~L~~-~G-~V~v~~r~ 159 (287)
T 1nvt_A 129 KNIVIYGAGGAARAVAFELAK-DN-NIIIANRT 159 (287)
T ss_dssp CEEEEECCSHHHHHHHHHHTS-SS-EEEEECSS
T ss_pred CEEEEECchHHHHHHHHHHHH-CC-CEEEEECC
Confidence 359999999999999999999 99 99999874
No 459
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=84.37 E-value=1.1 Score=43.34 Aligned_cols=34 Identities=18% Similarity=0.359 Sum_probs=30.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
....|+|||+|-.|.++|+.|+. .|+ .++++|..
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~~-~~~~~el~L~Di~ 53 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISILM-KDLADELALVDVI 53 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHHH-TTCCSEEEEECSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHh-CCCCceEEEEeCC
Confidence 45689999999999999999999 897 89999964
No 460
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=84.29 E-value=1.5 Score=43.36 Aligned_cols=35 Identities=31% Similarity=0.390 Sum_probs=31.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...|+|+|+|..|..+|.++.+ .|++|+++|..+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~~-lG~~viv~d~~~~ 46 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQK-MGYKVVVLDPSED 46 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEEESCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEEECCCC
Confidence 3569999999999999999999 9999999997654
No 461
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=84.21 E-value=0.98 Score=41.99 Aligned_cols=32 Identities=19% Similarity=0.324 Sum_probs=29.7
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
.++|+|+|-+|.+++..|.+ .|. +|+|+.|.+
T Consensus 110 ~vliiGaGg~a~ai~~~L~~-~G~~~I~v~nR~~ 142 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALLQ-MGVKDIWVVNRTI 142 (253)
T ss_dssp SEEEECCSHHHHHHHHHHHH-TTCCCEEEEESCH
T ss_pred eEEEECcHHHHHHHHHHHHH-cCCCEEEEEeCCH
Confidence 79999999999999999999 998 899999753
No 462
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=84.17 E-value=0.78 Score=42.75 Aligned_cols=33 Identities=18% Similarity=0.335 Sum_probs=30.0
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCc-EEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVK-VCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~-V~viE~~~ 119 (503)
..|.|||+|-.|...|..|++ .|++ |.++++++
T Consensus 11 m~i~iiG~G~mG~~~a~~l~~-~g~~~v~~~~~~~ 44 (266)
T 3d1l_A 11 TPIVLIGAGNLATNLAKALYR-KGFRIVQVYSRTE 44 (266)
T ss_dssp CCEEEECCSHHHHHHHHHHHH-HTCCEEEEECSSH
T ss_pred CeEEEEcCCHHHHHHHHHHHH-CCCeEEEEEeCCH
Confidence 579999999999999999999 8999 89999753
No 463
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=84.09 E-value=0.93 Score=43.90 Aligned_cols=37 Identities=24% Similarity=0.382 Sum_probs=31.5
Q ss_pred CCCCcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 81 SDRIRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 81 ~~~~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
+++....|+|||+|-.|.++|+.|+. .++ .++++|..
T Consensus 5 ~~~~~~KI~IiGaG~vG~~la~~l~~-~~~~~el~L~Di~ 43 (326)
T 2zqz_A 5 TDKDHQKVILVGDGAVGSSYAYAMVL-QGIAQEIGIVDIF 43 (326)
T ss_dssp -CCCCCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSC
T ss_pred ccCCCCEEEEECCCHHHHHHHHHHHc-CCCCCEEEEEeCC
Confidence 45566899999999999999999998 776 79999963
No 464
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=84.08 E-value=0.96 Score=42.83 Aligned_cols=33 Identities=27% Similarity=0.380 Sum_probs=29.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
.-.++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 127 ~k~vlVlGaGG~g~aia~~L~~-~G~~~v~i~~R~ 160 (283)
T 3jyo_A 127 LDSVVQVGAGGVGNAVAYALVT-HGVQKLQVADLD 160 (283)
T ss_dssp CSEEEEECCSHHHHHHHHHHHH-TTCSEEEEECSS
T ss_pred CCEEEEECCcHHHHHHHHHHHH-CCCCEEEEEECC
Confidence 3469999999999999999999 998 69999875
No 465
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=84.05 E-value=1 Score=43.10 Aligned_cols=32 Identities=31% Similarity=0.296 Sum_probs=28.8
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|+|||+|-.|.+.|..|+ .|.+|++++|++
T Consensus 3 mkI~IiGaGa~G~~~a~~L~--~g~~V~~~~r~~ 34 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS--LYHDVTVVTRRQ 34 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH--TTSEEEEECSCH
T ss_pred CEEEEECCCHHHHHHHHHHh--cCCceEEEECCH
Confidence 57999999999999999998 499999999753
No 466
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=84.01 E-value=0.78 Score=49.56 Aligned_cols=34 Identities=21% Similarity=0.228 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||+|.-|...|..|++ .|++|+++|+++
T Consensus 314 i~kV~VIGaG~MG~~iA~~la~-aG~~V~l~D~~~ 347 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSAS-KGTPILMKDINE 347 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHHH-TTCCEEEECSSH
T ss_pred CCEEEEECCChhhHHHHHHHHh-CCCEEEEEECCH
Confidence 3469999999999999999999 999999999764
No 467
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=83.89 E-value=0.95 Score=45.22 Aligned_cols=34 Identities=24% Similarity=0.342 Sum_probs=31.0
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
....|+|+|+|..|..++.++.+ .|++|++++ .+
T Consensus 23 ~~~~I~ilGgG~lg~~l~~aa~~-lG~~v~~~d-~~ 56 (403)
T 3k5i_A 23 NSRKVGVLGGGQLGRMLVESANR-LNIQVNVLD-AD 56 (403)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-HTCEEEEEE-ST
T ss_pred CCCEEEEECCCHHHHHHHHHHHH-CCCEEEEEE-CC
Confidence 35689999999999999999999 999999999 54
No 468
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=83.83 E-value=0.95 Score=43.56 Aligned_cols=32 Identities=19% Similarity=0.282 Sum_probs=29.5
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
-.++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 155 k~~lVlGaGG~g~aia~~L~~-~Ga~~V~i~nR~ 187 (315)
T 3tnl_A 155 KKMTICGAGGAATAICIQAAL-DGVKEISIFNRK 187 (315)
T ss_dssp SEEEEECCSHHHHHHHHHHHH-TTCSEEEEEECS
T ss_pred CEEEEECCChHHHHHHHHHHH-CCCCEEEEEECC
Confidence 469999999999999999999 998 89999875
No 469
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=83.81 E-value=1.1 Score=40.27 Aligned_cols=32 Identities=22% Similarity=0.444 Sum_probs=29.4
Q ss_pred cEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 87 DVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.|+|.|| |-.|..++..|.+ +|++|+++.|++
T Consensus 2 kilVtGatG~iG~~l~~~L~~-~g~~V~~~~R~~ 34 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARR-RGHEVLAVVRDP 34 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEESCH
T ss_pred EEEEEcCCCHHHHHHHHHHHH-CCCEEEEEEecc
Confidence 4899998 9999999999999 999999999863
No 470
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=83.69 E-value=1.1 Score=41.91 Aligned_cols=31 Identities=19% Similarity=0.363 Sum_probs=29.1
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
.++|||+|-+|.+.|..|.+ .|.+|++++|.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~~-~g~~v~v~~r~ 148 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALRE-AGLEVWVWNRT 148 (263)
T ss_dssp CEEEECCSHHHHHHHHHHHH-TTCCEEEECSS
T ss_pred eEEEECCcHHHHHHHHHHHH-CCCEEEEEECC
Confidence 79999999999999999999 99999999974
No 471
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=83.67 E-value=0.93 Score=43.72 Aligned_cols=34 Identities=21% Similarity=0.377 Sum_probs=29.9
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
....|+|||+|-.|.++|+.|+. .++ .++++|..
T Consensus 4 ~~~KI~IiGaG~vG~~~a~~l~~-~~~~~el~L~Di~ 39 (318)
T 1ez4_A 4 NHQKVVLVGDGAVGSSYAFAMAQ-QGIAEEFVIVDVV 39 (318)
T ss_dssp TBCEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHc-CCCCCEEEEEeCC
Confidence 34789999999999999999999 776 89999963
No 472
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=83.62 E-value=1.1 Score=48.44 Aligned_cols=37 Identities=22% Similarity=0.348 Sum_probs=32.8
Q ss_pred CCCcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 82 DRIRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 82 ~~~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.+..-.|.|||+|.-|...|..++. .|++|+++|..+
T Consensus 313 ~~~i~~v~ViGaG~MG~gIA~~~a~-aG~~V~l~D~~~ 349 (742)
T 3zwc_A 313 AQPVSSVGVLGLGTMGRGIAISFAR-VGISVVAVESDP 349 (742)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHT-TTCEEEEECSSH
T ss_pred cccccEEEEEcccHHHHHHHHHHHh-CCCchhcccchH
Confidence 3445789999999999999999999 999999999754
No 473
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=83.61 E-value=1.1 Score=43.44 Aligned_cols=39 Identities=18% Similarity=0.276 Sum_probs=31.2
Q ss_pred CCCcCcEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCCCC
Q 010693 82 DRIRYDVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSPLS 121 (503)
Q Consensus 82 ~~~~~DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~~~ 121 (503)
+.....|+|.|| |-.|..++..|.+ .|++|+++.|.+..
T Consensus 16 ~~~~~~vlVtGatG~iG~~l~~~L~~-~G~~V~~~~r~~~~ 55 (347)
T 4id9_A 16 PRGSHMILVTGSAGRVGRAVVAALRT-QGRTVRGFDLRPSG 55 (347)
T ss_dssp -----CEEEETTTSHHHHHHHHHHHH-TTCCEEEEESSCCS
T ss_pred ccCCCEEEEECCCChHHHHHHHHHHh-CCCEEEEEeCCCCC
Confidence 444567999998 9999999999999 99999999987643
No 474
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=83.59 E-value=0.78 Score=44.99 Aligned_cols=33 Identities=18% Similarity=0.428 Sum_probs=30.3
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
...|+|||+|-.|..+|..|++ .|. +++|+|.+
T Consensus 118 ~~~VlvvG~GglGs~va~~La~-aGvg~i~lvD~D 151 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILAT-SGIGEIILIDND 151 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-HTCSEEEEEECC
T ss_pred CCeEEEECCCHHHHHHHHHHHh-CCCCeEEEECCC
Confidence 5679999999999999999999 998 79999964
No 475
>4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens}
Probab=82.82 E-value=1.3 Score=41.86 Aligned_cols=33 Identities=24% Similarity=0.336 Sum_probs=30.3
Q ss_pred cEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 87 DVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 87 DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.|+|.|| |..|..++..|.+ +|++|+++-|++.
T Consensus 2 kILVTGatGfIG~~L~~~L~~-~G~~V~~l~R~~~ 35 (298)
T 4b4o_A 2 RVLVGGGTGFIGTALTQLLNA-RGHEVTLVSRKPG 35 (298)
T ss_dssp EEEEETTTSHHHHHHHHHHHH-TTCEEEEEESSCC
T ss_pred EEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCCC
Confidence 5899998 9999999999999 9999999998754
No 476
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=82.82 E-value=0.93 Score=45.44 Aligned_cols=34 Identities=18% Similarity=0.299 Sum_probs=30.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
.-.|+|||.|..|..+|..|.. .|.+|+++|+++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lka-~Ga~Viv~D~~p 244 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALRG-FGARVVVTEVDP 244 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCH
T ss_pred CCEEEEEeeCHHHHHHHHHHHH-CCCEEEEECCCh
Confidence 3579999999999999999999 999999999743
No 477
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=82.72 E-value=1.2 Score=42.11 Aligned_cols=33 Identities=12% Similarity=0.287 Sum_probs=29.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
.-.++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~~-~G~~~v~v~~R~ 159 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLLD-QQPASITVTNRT 159 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHHT-TCCSEEEEEESS
T ss_pred CCEEEEECchHHHHHHHHHHHh-cCCCeEEEEECC
Confidence 3569999999999999999999 997 89999874
No 478
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=82.56 E-value=1.2 Score=41.76 Aligned_cols=33 Identities=12% Similarity=0.128 Sum_probs=29.6
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
.-.++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~~-~G~~~v~i~~R~ 153 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFLQ-AGPSELVIANRD 153 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHHH-TCCSEEEEECSC
T ss_pred CCEEEEECccHHHHHHHHHHHH-cCCCEEEEEeCC
Confidence 3569999999999999999999 996 89999874
No 479
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=82.46 E-value=1.7 Score=44.33 Aligned_cols=38 Identities=26% Similarity=0.379 Sum_probs=34.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPLST 122 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~~~ 122 (503)
..+||+|||||++||++|+.|++ +|++|+|+|+.+..+
T Consensus 10 ~~~~v~IIGaG~aGl~aA~~L~~-~g~~v~v~E~~~~~G 47 (489)
T 2jae_A 10 GSHSVVVLGGGPAGLCSAFELQK-AGYKVTVLEARTRPG 47 (489)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHH-CCCCEEEEeccCCCC
Confidence 46899999999999999999999 999999999987654
No 480
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=82.45 E-value=1.2 Score=43.32 Aligned_cols=33 Identities=15% Similarity=0.129 Sum_probs=29.1
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|+|+|+|+.|++++..+.. .|.+|+++++.+
T Consensus 178 ~~VlV~GaG~vG~~a~qla~~-~Ga~Vi~~~~~~ 210 (348)
T 3two_A 178 TKVGVAGFGGLGSMAVKYAVA-MGAEVSVFARNE 210 (348)
T ss_dssp CEEEEESCSHHHHHHHHHHHH-TTCEEEEECSSS
T ss_pred CEEEEECCcHHHHHHHHHHHH-CCCeEEEEeCCH
Confidence 469999999999999888888 999999999654
No 481
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=82.43 E-value=1.3 Score=44.51 Aligned_cols=35 Identities=23% Similarity=0.329 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
.-.|+|+|+|..|..++.++.+ .|++|+++|..+.
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~~-lG~~v~v~d~~~~ 69 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQS-MGYRVAVLDPDPA 69 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHH-CCCEEEEECCCCc
Confidence 3579999999999999999999 9999999996543
No 482
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=82.41 E-value=1.9 Score=41.80 Aligned_cols=34 Identities=18% Similarity=0.314 Sum_probs=31.1
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|.|||.|-.|...|..|+. .|.+|+++++.+
T Consensus 150 g~~vgIIG~G~iG~~iA~~l~~-~G~~V~~~d~~~ 183 (334)
T 2dbq_A 150 GKTIGIIGLGRIGQAIAKRAKG-FNMRILYYSRTR 183 (334)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSC
T ss_pred CCEEEEEccCHHHHHHHHHHHh-CCCEEEEECCCc
Confidence 4579999999999999999999 999999999764
No 483
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=82.31 E-value=1 Score=41.89 Aligned_cols=30 Identities=30% Similarity=0.310 Sum_probs=27.9
Q ss_pred cEEEECCCHHHHHHHHHHHccCCCcEEEEcC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSVKVCCVDP 117 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~~V~viE~ 117 (503)
.|.|||+|-.|...|..|++ .|++|+++++
T Consensus 2 ~I~iIG~G~mG~~la~~l~~-~g~~V~~~~~ 31 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLRS-RGVEVVTSLE 31 (264)
T ss_dssp EEEEESCSHHHHHHHHHHHH-TTCEEEECCT
T ss_pred eEEEEechHHHHHHHHHHHH-CCCeEEEeCC
Confidence 58999999999999999999 9999999875
No 484
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=82.30 E-value=0.99 Score=45.34 Aligned_cols=33 Identities=18% Similarity=0.324 Sum_probs=30.2
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
-.|+|||.|..|..+|..|.. .|.+|++.|+++
T Consensus 248 KTVgVIG~G~IGr~vA~~lra-fGa~Viv~d~dp 280 (464)
T 3n58_A 248 KVAVVCGYGDVGKGSAQSLAG-AGARVKVTEVDP 280 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCEEEEECSSH
T ss_pred CEEEEECcCHHHHHHHHHHHH-CCCEEEEEeCCc
Confidence 469999999999999999999 999999999754
No 485
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=82.24 E-value=1.2 Score=42.12 Aligned_cols=32 Identities=22% Similarity=0.461 Sum_probs=29.4
Q ss_pred CcEEEEC-CCHHHHHHHHHHHccCCCcEEEEcCC
Q 010693 86 YDVIIIG-TGPAGLRLAEQVSSRHSVKVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVG-gGpaGl~~A~~La~~~G~~V~viE~~ 118 (503)
-.++|+| +|-+|.++|..|++ .|.+|+++.|.
T Consensus 120 k~vlVtGaaGGiG~aia~~L~~-~G~~V~i~~R~ 152 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLAG-EGAEVVLCGRK 152 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHHH-TTCEEEEEESS
T ss_pred CEEEEECCCcHHHHHHHHHHHH-CcCEEEEEECC
Confidence 4699999 89999999999999 99999999974
No 486
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=82.10 E-value=2.4 Score=44.96 Aligned_cols=54 Identities=11% Similarity=0.124 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHhCCcEEE-EeEEEEEEEeC--CEEE-EEeCCCcEEEeceEEecCC
Q 010693 171 RNILKTKLLENCVSNGVKFH-KAKVWHVNHQE--FESS-IVCDDGNEIKASLIVDASG 224 (503)
Q Consensus 171 r~~l~~~L~~~~~~~gv~~~-~~~v~~i~~~~--~~~~-v~~~~g~~i~a~~vI~A~G 224 (503)
-..+.+.|.+.+...|++++ ++.|..|..++ +++. |+..+|++++|+.||.+..
T Consensus 377 ~g~L~qaL~r~~~~~Gg~i~l~~~V~~I~~~~~~g~v~gV~~~~Ge~i~A~~VVs~~~ 434 (650)
T 1vg0_A 377 QGELPQCFCRMCAVFGGIYCLRHSVQCLVVDKESRKCKAVIDQFGQRIISKHFIIEDS 434 (650)
T ss_dssp TTHHHHHHHHHHHHTTCEEESSCCEEEEEEETTTCCEEEEEETTSCEEECSEEEEEGG
T ss_pred hhHHHHHHHHHHHHcCCEEEeCCEeeEEEEeCCCCeEEEEEeCCCCEEEcCEEEEChh
Confidence 35678889899999999999 99999998876 5444 4457799999999998443
No 487
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=82.05 E-value=1.5 Score=42.72 Aligned_cols=33 Identities=24% Similarity=0.505 Sum_probs=29.2
Q ss_pred cCcEEEECC-CHHHHHHHHHHHccCCC--cEEEEcCC
Q 010693 85 RYDVIIIGT-GPAGLRLAEQVSSRHSV--KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGg-GpaGl~~A~~La~~~G~--~V~viE~~ 118 (503)
...|+|||+ |-.|..+|+.++. .|+ .|+++|..
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~~-~g~~~evvLiDi~ 43 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAAM-MRLTPNLCLYDPF 43 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHHH-TTCCSCEEEECSC
T ss_pred CCEEEEECCCChHHHHHHHHHHh-cCCCCEEEEEeCC
Confidence 457999998 9999999999999 885 89999964
No 488
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=81.99 E-value=1.1 Score=42.90 Aligned_cols=32 Identities=19% Similarity=0.374 Sum_probs=28.4
Q ss_pred cEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 87 DVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
.|+|||+|-.|..+|+.|+. .|+ .|+++|..+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-~~l~el~L~Di~~ 33 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-RGYDDLLLIARTP 33 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTCSCEEEECSST
T ss_pred CEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCCh
Confidence 38999999999999999999 888 599999753
No 489
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=81.92 E-value=1.1 Score=42.34 Aligned_cols=33 Identities=12% Similarity=0.257 Sum_probs=29.9
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
.-.++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 122 ~k~vlvlGaGGaaraia~~L~~-~G~~~v~v~nRt 155 (282)
T 3fbt_A 122 NNICVVLGSGGAARAVLQYLKD-NFAKDIYVVTRN 155 (282)
T ss_dssp TSEEEEECSSTTHHHHHHHHHH-TTCSEEEEEESC
T ss_pred CCEEEEECCcHHHHHHHHHHHH-cCCCEEEEEeCC
Confidence 3579999999999999999999 998 89999875
No 490
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=81.92 E-value=1.1 Score=42.44 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=29.7
Q ss_pred cCcEEEECCCHHHHHHHHHHHccC--CCcEEEEcCCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRH--SVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~--G~~V~viE~~~ 119 (503)
...|.|||+|-.|.+.|..|++ . |.+|+++++++
T Consensus 6 ~~~I~iIG~G~mG~~~a~~l~~-~g~~~~V~~~d~~~ 41 (290)
T 3b1f_A 6 EKTIYIAGLGLIGASLALGIKR-DHPHYKIVGYNRSD 41 (290)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH-HCTTSEEEEECSSH
T ss_pred cceEEEEeeCHHHHHHHHHHHh-CCCCcEEEEEcCCH
Confidence 3579999999999999999998 7 68999999753
No 491
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=81.80 E-value=0.81 Score=43.29 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
..|.|||+|-.|...|..|++ .|++|++++ ++
T Consensus 4 m~i~iiG~G~~G~~~a~~l~~-~g~~V~~~~-~~ 35 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINLAR-AGHQLHVTT-IG 35 (295)
T ss_dssp CEEEECCCSTTHHHHHHHHHH-TTCEEEECC-SS
T ss_pred CEEEEEccCHHHHHHHHHHHh-CCCEEEEEc-CH
Confidence 469999999999999999999 999999998 54
No 492
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=81.79 E-value=0.97 Score=45.18 Aligned_cols=33 Identities=21% Similarity=0.431 Sum_probs=29.8
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
.-.|+|||+|..|..+|..|.. .|. +|++++|.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~~-~G~~~V~v~~r~ 200 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLVD-RGVRAVLVANRT 200 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHHH-HCCSEEEEECSS
T ss_pred CCEEEEEChHHHHHHHHHHHHH-CCCCEEEEEeCC
Confidence 3469999999999999999999 898 89999974
No 493
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=81.78 E-value=1.3 Score=46.17 Aligned_cols=34 Identities=24% Similarity=0.436 Sum_probs=30.7
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
....|+|||+|-.|..+|..|++ .|. +++|+|.+
T Consensus 326 ~~~kVLIVGaGGLGs~va~~La~-aGVG~ItLvD~D 360 (598)
T 3vh1_A 326 KNTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNG 360 (598)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHT-TTCCEEEEECCS
T ss_pred hCCeEEEECCCHHHHHHHHHHHH-cCCCEEEEECCC
Confidence 35689999999999999999999 998 79999965
No 494
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=81.78 E-value=1.3 Score=43.50 Aligned_cols=32 Identities=19% Similarity=0.320 Sum_probs=29.4
Q ss_pred cCcEEEECCCHHHHHHHHHHHccCCCcEEEEcC
Q 010693 85 RYDVIIIGTGPAGLRLAEQVSSRHSVKVCCVDP 117 (503)
Q Consensus 85 ~~DvvIVGgGpaGl~~A~~La~~~G~~V~viE~ 117 (503)
.-.|+|+|+|-.|..+|..|.+ .|.+|++.|+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~~-~GakVvv~D~ 204 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLNT-EGAKLVVTDV 204 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHHH-TTCEEEEECS
T ss_pred cCEEEEECchHHHHHHHHHHHH-CCCEEEEEcC
Confidence 3569999999999999999999 9999999985
No 495
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=81.75 E-value=1.8 Score=38.77 Aligned_cols=32 Identities=13% Similarity=0.208 Sum_probs=28.8
Q ss_pred cEEEECC-CHHHHHHHHHHH-ccCCCcEEEEcCCC
Q 010693 87 DVIIIGT-GPAGLRLAEQVS-SRHSVKVCCVDPSP 119 (503)
Q Consensus 87 DvvIVGg-GpaGl~~A~~La-~~~G~~V~viE~~~ 119 (503)
.|+|.|| |-.|..+|..|+ + .|++|+++.|++
T Consensus 7 ~vlVtGasg~iG~~~~~~l~~~-~g~~V~~~~r~~ 40 (221)
T 3r6d_A 7 YITILGAAGQIAQXLTATLLTY-TDMHITLYGRQL 40 (221)
T ss_dssp EEEEESTTSHHHHHHHHHHHHH-CCCEEEEEESSH
T ss_pred EEEEEeCCcHHHHHHHHHHHhc-CCceEEEEecCc
Confidence 3999995 999999999999 8 999999999864
No 496
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=81.68 E-value=1.5 Score=41.60 Aligned_cols=35 Identities=23% Similarity=0.338 Sum_probs=31.8
Q ss_pred cCcEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 85 RYDVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 85 ~~DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
...|+|.|| |..|..++..|.+ .|++|+++.|.+.
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~-~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVA-SGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHH-TTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHH-CCCEEEEEecCCc
Confidence 457999999 9999999999999 9999999998765
No 497
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=81.63 E-value=1.3 Score=46.24 Aligned_cols=35 Identities=23% Similarity=0.425 Sum_probs=31.4
Q ss_pred CcCcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCCC
Q 010693 84 IRYDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPSP 119 (503)
Q Consensus 84 ~~~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~~ 119 (503)
....|+|||+|-.|..+|..|++ .|+ +++|+|.+.
T Consensus 325 ~~arVLIVGaGGLGs~vA~~La~-aGVG~ItLvD~D~ 360 (615)
T 4gsl_A 325 KNTKVLLLGAGTLGCYVSRALIA-WGVRKITFVDNGT 360 (615)
T ss_dssp HTCEEEEECCSHHHHHHHHHHHH-TTCCEEEEECCCB
T ss_pred hCCeEEEECCCHHHHHHHHHHHH-cCCCEEEEEcCCC
Confidence 45789999999999999999999 997 799999753
No 498
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=81.46 E-value=1.8 Score=41.60 Aligned_cols=34 Identities=21% Similarity=0.320 Sum_probs=30.5
Q ss_pred cCcEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCC
Q 010693 85 RYDVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSP 119 (503)
Q Consensus 85 ~~DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~ 119 (503)
...|+|.|| |-.|..+|..|++ .|++|+++.|.+
T Consensus 20 ~~~vlVTGasG~iG~~l~~~L~~-~g~~V~~~~r~~ 54 (330)
T 2pzm_A 20 HMRILITGGAGCLGSNLIEHWLP-QGHEILVIDNFA 54 (330)
T ss_dssp CCEEEEETTTSHHHHHHHHHHGG-GTCEEEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHH-CCCEEEEEECCC
Confidence 346999998 9999999999999 999999999864
No 499
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=81.43 E-value=1.3 Score=39.85 Aligned_cols=34 Identities=24% Similarity=0.389 Sum_probs=30.8
Q ss_pred CcEEEECC-CHHHHHHHHHHHccCCCcEEEEcCCCC
Q 010693 86 YDVIIIGT-GPAGLRLAEQVSSRHSVKVCCVDPSPL 120 (503)
Q Consensus 86 ~DvvIVGg-GpaGl~~A~~La~~~G~~V~viE~~~~ 120 (503)
..|+|.|| |-.|..++..|.+ .|++|+++.|.+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~-~g~~V~~~~r~~~ 39 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALN-RGFEVTAVVRHPE 39 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHT-TTCEEEEECSCGG
T ss_pred CEEEEEcCCchHHHHHHHHHHH-CCCEEEEEEcCcc
Confidence 46999996 9999999999999 9999999998754
No 500
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=81.28 E-value=1.4 Score=42.39 Aligned_cols=32 Identities=13% Similarity=0.337 Sum_probs=29.4
Q ss_pred CcEEEECCCHHHHHHHHHHHccCCC-cEEEEcCC
Q 010693 86 YDVIIIGTGPAGLRLAEQVSSRHSV-KVCCVDPS 118 (503)
Q Consensus 86 ~DvvIVGgGpaGl~~A~~La~~~G~-~V~viE~~ 118 (503)
-.++|+|+|-+|.++|..|++ .|. +|+|+.|.
T Consensus 149 k~~lVlGAGGaaraia~~L~~-~G~~~v~v~nRt 181 (312)
T 3t4e_A 149 KTMVLLGAGGAATAIGAQAAI-EGIKEIKLFNRK 181 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-TTCSEEEEEECS
T ss_pred CEEEEECcCHHHHHHHHHHHH-cCCCEEEEEECC
Confidence 469999999999999999999 998 79999875
Done!