Query 010696
Match_columns 503
No_of_seqs 307 out of 2050
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 12:20:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/010696.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/010696hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1qdm_A Prophytepsin; aspartic 100.0 4E-87 1.4E-91 706.6 39.7 471 33-503 1-478 (478)
2 3psg_A Pepsinogen; hydrolase(a 100.0 1.1E-71 3.6E-76 572.3 36.8 360 32-503 1-370 (370)
3 2x0b_A Renin; hydrolase-hormon 100.0 1.8E-71 6.3E-76 571.9 35.7 366 31-503 7-383 (383)
4 1tzs_A Cathepsin E; hydrolase, 100.0 4.1E-65 1.4E-69 520.5 36.5 331 66-503 11-342 (351)
5 3k1w_A Renin; protease, altern 100.0 4.8E-65 1.6E-69 518.1 36.2 332 65-503 5-340 (341)
6 3cms_A Chymosin B; hydrolase, 100.0 1.3E-64 4.3E-69 511.2 38.3 320 67-503 3-323 (323)
7 1dpj_A Proteinase A; proteinas 100.0 1.3E-64 4.4E-69 512.5 38.3 326 67-503 2-329 (329)
8 4aa9_A Chymosin; hydrolase, as 100.0 8.9E-65 3.1E-69 511.7 34.5 318 69-503 2-320 (320)
9 1am5_A Pepsin, acid proteinase 100.0 2.8E-64 9.5E-69 508.9 35.8 321 69-503 3-324 (324)
10 1htr_B Gastricsin; aspartyl pr 100.0 2.2E-64 7.6E-69 510.7 34.7 324 69-503 4-329 (329)
11 3qvc_A Histo-aspartic protease 100.0 1.9E-63 6.5E-68 521.4 36.9 322 64-503 123-449 (451)
12 1miq_A Plasmepsin; aspartic pr 100.0 2.9E-63 9.9E-68 510.6 36.9 320 66-503 50-374 (375)
13 2bju_A Plasmepsin II; aspartic 100.0 1.5E-62 5.1E-67 514.0 35.4 321 66-503 126-450 (453)
14 1yg9_A Aspartic protease BLA G 100.0 4.2E-62 1.4E-66 494.1 33.1 318 66-503 5-329 (330)
15 1mpp_A Pepsin; hydrolase(acid 100.0 7E-62 2.4E-66 498.6 33.9 325 66-503 6-355 (361)
16 2apr_A Rhizopuspepsin; hydrola 100.0 2.4E-59 8.3E-64 472.9 38.6 310 74-503 11-324 (325)
17 3c9x_A Trichoderma reesei aspa 100.0 1.5E-59 5.2E-64 475.2 36.2 312 74-502 11-329 (329)
18 1oew_A Endothiapepsin; hydrola 100.0 2.2E-59 7.7E-64 473.9 35.8 309 76-502 13-329 (329)
19 3fv3_A SAPP1P-secreted asparti 100.0 2.5E-58 8.6E-63 468.3 37.8 312 68-503 3-329 (339)
20 2qzx_A Candidapepsin-5; aspart 100.0 5.3E-58 1.8E-62 466.4 38.3 314 67-503 2-331 (342)
21 1ibq_A Aspergillopepsin; aspar 100.0 6.7E-58 2.3E-62 462.4 37.2 308 76-503 12-325 (325)
22 1j71_A Candidapepsin, aspartic 100.0 6.6E-58 2.3E-62 464.2 36.7 308 68-503 3-324 (334)
23 1izd_A Aspartic proteinase; su 100.0 7.2E-58 2.5E-62 461.7 35.3 305 76-503 13-323 (323)
24 3pvk_A Candidapepsin-2; hydrol 100.0 1.4E-57 4.9E-62 463.3 36.3 314 68-503 3-331 (342)
25 1bxo_A Protein (penicillopepsi 100.0 5E-58 1.7E-62 462.9 31.3 305 76-503 13-323 (323)
26 1wkr_A Polyporopepsin; hydrola 100.0 3.2E-57 1.1E-61 460.3 36.1 313 67-503 2-333 (340)
27 3lpj_A Beta-secretase 1; alzhe 100.0 1.4E-56 4.8E-61 472.7 28.4 325 71-503 67-420 (455)
28 2ewy_A Beta-secretase 2; BACE2 100.0 3E-55 1E-59 453.0 32.9 324 70-503 5-355 (383)
29 3vf3_A Beta-secretase 1; struc 100.0 9E-55 3.1E-59 452.2 30.5 322 72-503 22-374 (402)
30 2qp8_A Beta-secretase 1; BACE1 100.0 2E-54 6.8E-59 448.5 31.7 324 71-503 14-367 (395)
31 3aup_A SBG7S, BG, basic 7S glo 100.0 3.1E-53 1.1E-57 440.6 28.9 324 67-503 9-387 (403)
32 3vla_A EDGP; extracellular, in 100.0 1.3E-52 4.6E-57 435.9 24.7 328 67-502 8-398 (413)
33 1b5f_A Protein (cardosin A); h 100.0 4.9E-49 1.7E-53 380.2 26.4 237 67-307 2-239 (239)
34 1t6e_X Xylanase inhibitor; two 100.0 8.5E-50 2.9E-54 411.7 22.4 320 69-503 4-373 (381)
35 1lya_B Cathepsin D; lysosomal 100.0 2.5E-45 8.7E-50 354.8 28.1 241 158-503 1-241 (241)
36 1lya_A Cathepsin D; lysosomal 99.9 7.2E-24 2.5E-28 174.1 11.0 92 68-159 3-96 (97)
37 1b5f_B Protein (cardosin A); h 99.8 3.3E-21 1.1E-25 155.4 10.0 87 416-503 1-87 (87)
38 3rfi_A Asp; PSI, saposin, hydr 99.5 1.5E-15 5.3E-20 126.6 0.8 106 306-412 3-108 (108)
39 3bqp_A Proactivator polypeptid 96.8 0.0009 3.1E-08 51.7 3.6 40 374-413 2-41 (80)
40 4ddj_A Saposin-A, protein A; s 96.7 0.0012 4E-08 51.5 4.2 41 374-414 3-43 (83)
41 2qyp_A Proactivator polypeptid 96.6 0.0013 4.6E-08 52.2 3.7 42 373-414 4-45 (91)
42 2gtg_A Proactivator polypeptid 95.9 0.0066 2.3E-07 47.2 3.9 41 373-413 3-43 (83)
43 1n69_A Saposin B; lipid bindin 95.8 0.0075 2.6E-07 46.7 4.2 41 373-413 2-43 (81)
44 1l9l_A Granulysin; saposin fol 95.3 0.011 3.7E-07 44.9 3.2 38 375-413 2-39 (74)
45 1nkl_A NK-lysin; saposin fold, 95.3 0.011 3.7E-07 45.5 3.1 38 376-413 3-40 (78)
46 1of9_A Pore-forming peptide am 95.1 0.011 3.8E-07 45.2 2.7 40 374-414 2-41 (77)
47 2i1a_A DNA damage-inducible pr 95.0 0.049 1.7E-06 47.1 6.9 92 76-191 23-116 (148)
48 2i1a_A DNA damage-inducible pr 92.5 0.3 1E-05 42.0 7.3 26 475-500 109-134 (148)
49 2js9_A Saposin-like protein fa 92.5 0.038 1.3E-06 44.4 1.3 50 373-424 20-69 (99)
50 3s8i_A Protein DDI1 homolog 1; 91.9 0.29 1E-05 42.3 6.4 92 77-191 22-115 (148)
51 3s8i_A Protein DDI1 homolog 1; 91.9 0.44 1.5E-05 41.2 7.5 26 475-500 108-133 (148)
52 2js9_A Saposin-like protein fa 90.7 0.036 1.2E-06 44.6 -0.7 39 308-346 61-99 (99)
53 2qyp_A Proactivator polypeptid 90.2 0.059 2E-06 42.5 0.3 39 310-348 46-84 (91)
54 3bqp_A Proactivator polypeptid 88.3 0.08 2.7E-06 40.4 -0.3 37 310-346 43-79 (80)
55 2gtg_A Proactivator polypeptid 85.2 0.079 2.7E-06 40.9 -1.9 37 310-346 45-81 (83)
56 1nkl_A NK-lysin; saposin fold, 84.8 0.081 2.8E-06 40.4 -2.0 37 310-346 41-77 (78)
57 1of9_A Pore-forming peptide am 83.9 0.082 2.8E-06 40.3 -2.3 37 309-345 41-77 (77)
58 4ddj_A Saposin-A, protein A; s 76.9 0.15 5.1E-06 39.3 -3.1 37 310-346 45-82 (83)
59 2hs1_A HIV-1 protease; ultra-h 76.3 3.2 0.00011 33.0 4.6 29 81-111 10-38 (99)
60 1l9l_A Granulysin; saposin fol 76.1 0.28 9.7E-06 37.0 -1.6 33 310-342 41-73 (74)
61 1n69_A Saposin B; lipid bindin 74.9 0.23 7.7E-06 38.2 -2.5 36 310-346 45-80 (81)
62 1fmb_A EIAV protease; hydrolas 73.6 3.3 0.00011 33.3 4.1 28 79-108 8-35 (104)
63 3vcm_P Prorenin; aspartic prot 73.2 2.3 7.8E-05 28.1 2.6 23 31-53 7-29 (43)
64 3liy_A Protease; hydrolase, hy 73.0 3.4 0.00012 33.6 4.0 32 81-112 12-46 (116)
65 3s64_A AC-SLP-1, saposin-like 71.1 1 3.5E-05 34.9 0.5 50 296-345 37-87 (87)
66 3ec0_A Protease; HIV-2, inhibi 69.6 5.3 0.00018 31.7 4.4 29 81-111 10-38 (99)
67 1tzs_P Activation peptide from 66.3 3 0.0001 25.6 1.9 21 31-51 2-22 (35)
68 1htr_P Progastricsin (Pro segm 62.6 4.2 0.00015 26.3 2.2 22 32-53 2-23 (43)
69 2hah_A Protease, retropepsin; 59.1 8.5 0.00029 31.5 3.8 25 84-110 18-42 (116)
70 3sqf_A Protease; folded monome 55.6 12 0.00041 30.4 4.1 30 81-112 11-40 (114)
71 3slz_A GAG-Pro-POL polyprotein 46.8 22 0.00074 29.7 4.5 31 78-110 21-51 (132)
72 1bxo_A Protein (penicillopepsi 40.0 29 0.001 33.3 5.0 42 245-296 4-45 (323)
73 2rsp_A RSV protease; hydrolase 39.1 28 0.00096 28.7 3.9 22 91-112 30-51 (124)
74 1lya_A Cathepsin D; lysosomal 37.5 24 0.00082 27.5 3.2 17 279-295 28-44 (97)
75 1ibq_A Aspergillopepsin; aspar 37.3 32 0.0011 33.1 4.8 42 245-296 3-44 (325)
76 1izd_A Aspartic proteinase; su 36.5 36 0.0012 32.7 5.0 42 245-296 4-45 (323)
77 3ka2_A [L-Ala51;Gly51']HIV-1 p 36.4 29 0.00098 31.2 3.9 29 80-110 9-37 (203)
78 1mpp_A Pepsin; hydrolase(acid 26.9 55 0.0019 31.8 4.6 42 244-295 4-49 (361)
79 1fmb_A EIAV protease; hydrolas 25.9 35 0.0012 27.1 2.3 34 258-298 6-39 (104)
80 1oew_A Endothiapepsin; hydrola 25.6 68 0.0023 30.7 4.9 40 246-295 4-46 (329)
81 2hah_A Protease, retropepsin; 25.5 39 0.0013 27.5 2.6 30 257-294 11-40 (116)
82 1b5f_A Protein (cardosin A); h 24.8 84 0.0029 28.6 5.1 39 69-109 181-227 (239)
83 3c9x_A Trichoderma reesei aspa 24.8 72 0.0025 30.5 4.9 42 245-296 3-47 (329)
84 2hs1_A HIV-1 protease; ultra-h 24.6 33 0.0011 27.0 1.9 30 258-294 6-35 (99)
85 3ec0_A Protease; HIV-2, inhibi 22.7 40 0.0014 26.6 2.0 29 258-293 6-34 (99)
86 2apr_A Rhizopuspepsin; hydrola 22.5 82 0.0028 30.1 4.8 39 247-295 6-46 (325)
87 3cms_A Chymosin B; hydrolase, 20.7 84 0.0029 29.9 4.4 42 246-295 2-45 (323)
No 1
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4e-87 Score=706.60 Aligned_cols=471 Identities=53% Similarity=1.058 Sum_probs=399.4
Q ss_pred EEEeeeeeccchhhHHHhccccc--c-cc--ccccC-CCCceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeE
Q 010696 33 LRIQLKKRQLGINTINAARLITK--N-EV--HNRFN-HPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWV 106 (503)
Q Consensus 33 ~~ipL~~~~~~~~~~~~~~~~~~--~-~~--~~~~~-~~~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV 106 (503)
+||||+|++..++.+++.+..++ + .. +..+. .++...+||.|+.+.+|+++|+||||||+|+|+|||||+++||
T Consensus 1 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV 80 (478)
T 1qdm_A 1 VRIALKKRPIDRNSRVATGLSGGEEQPLLSGANPLRSEEEGDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWV 80 (478)
T ss_dssp CEEEEEECCCCHHHHHHHHTC----------------CCSSCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEE
T ss_pred CeeeeeeccchHHHHHhcchhhhhHHHHHhhcccccCcCCCceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEE
Confidence 48999999999988887663211 1 10 11122 2346779999999999999999999999999999999999999
Q ss_pred eCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccce
Q 010696 107 PSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDG 185 (503)
Q Consensus 107 ~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dG 185 (503)
+|..|..+..|..|+.|||++|+||+.. +.|.+.|++|++.|.+++|+|++|+..++++.||+++...+..|....+||
T Consensus 81 ~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~f~~~~~dG 160 (478)
T 1qdm_A 81 PSAKCYFSIACYLHSRYKAGASSTYKKNGKPAAIQYGTGSIAGYFSEDSVTVGDLVVKDQEFIEATKEPGITFLVAKFDG 160 (478)
T ss_dssp EBTTCCSCGGGGGSCCBCGGGCTTCBCCCCEEEEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEECCBSHHHHCSSSE
T ss_pred ecCCCCCCccccCCCCCCcccCCCeeeCCcEEEEEcCCCCeEEEEEEEEEEECCeEECCEEEEEEEecCCcccccccccc
Confidence 9999964468999999999999999998 999999999999999999999999999999999999987665566678899
Q ss_pred eeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeE
Q 010696 186 ILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDI 265 (503)
Q Consensus 186 IlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i 265 (503)
|||||++..+.....|++++|++||+|++++||+||++..+...+|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|
T Consensus 161 IlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~~~w~v~l~~i 240 (478)
T 1qdm_A 161 ILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQKGYWQFDMGDV 240 (478)
T ss_dssp EEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEETTEEEEECCE
T ss_pred eecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCCCeEEEEEeEE
Confidence 99999998887777889999999999999999999988643345899999999999999999999999999999999999
Q ss_pred EEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcce
Q 010696 266 LIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLC 345 (503)
Q Consensus 266 ~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 345 (503)
.|+++.+.++..++.+|+||||+++++|.+++++|.+++++.+.++..|+.++++|+.+|++.|++.++|.++|.++++|
T Consensus 241 ~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~~ii~~l~~~~~p~~vC~~iglC 320 (478)
T 1qdm_A 241 LVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQQILDLLLAETQPKKICSQVGLC 320 (478)
T ss_dssp EETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHHHHHHHHHTTCCHHHHHHHTTCC
T ss_pred EECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhhHHHHhhhhccChhhhhcccccc
Confidence 99998876666788999999999999999999999999999988899999999999999999999999999999999999
Q ss_pred eeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCC
Q 010696 346 VYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDI 425 (503)
Q Consensus 346 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~ 425 (503)
..+++...+++++.|++++....+...++..|.+|||++.|++++|++++|+++|++++.++|+.++...|.|.++|+.+
T Consensus 321 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~~~~~C~~~~~~~g~~~v~C~~~ 400 (478)
T 1qdm_A 321 TFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDYVNQLCNRLPSPMGESAVDCGSL 400 (478)
T ss_dssp ---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTCBCCSSSCCEECGGGG
T ss_pred ccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHHHHHHhhccCCCCCeEEeecccc
Confidence 99999888999999998876444445588999999999999999999999999999999999999999999999999988
Q ss_pred CCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 426 ASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 426 ~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
..+|+|+|+|+|++|+|+|++|+++..++....|+++|...+++++.++.||||++|||++|+|||++|+|||||+++
T Consensus 401 ~~lP~i~f~~gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~fl~~~y~vfD~~~~rIGfA~a~ 478 (478)
T 1qdm_A 401 GSMPDIEFTIGGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVFMGPYHTVFDYGKLRIGFAKAA 478 (478)
T ss_dssp TTCCCEEEEETTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred cccccEEEEECCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHHhccEEEEEECCCCEEEEEeCC
Confidence 899999999999999999999999876544568999999888766667899999999999999999999999999986
No 2
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.1e-71 Score=572.33 Aligned_cols=360 Identities=39% Similarity=0.749 Sum_probs=317.2
Q ss_pred eEEEeeeeeccchhhHHHhccccc---ccccc---cc-CC--CCceeEeceeccCceEEEEEEecCCCceEEEEEcCCCC
Q 010696 32 LLRIQLKKRQLGINTINAARLITK---NEVHN---RF-NH--PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSS 102 (503)
Q Consensus 32 ~~~ipL~~~~~~~~~~~~~~~~~~---~~~~~---~~-~~--~~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs 102 (503)
++||||+|.++.|+++++.+.++. .++++ +. .. .....+||.|+.|.+|+++|+||||||+|+|++||||+
T Consensus 1 ~~~ipl~~~~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs 80 (370)
T 3psg_A 1 LVKVPLVRKKSLRQNLIKDGKLKDFLKTHKHNPASKYFPEAAALIGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSS 80 (370)
T ss_dssp CEEEEEEECCCHHHHHHHTTCHHHHHHHCCCCGGGGTCTTSCCSSCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCC
T ss_pred CEEEEeEEcCcHHHHHHhcCcHHHHHhhhhcchhhhhccccccccceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCC
Confidence 379999999999999888765432 11111 11 11 14577999999999999999999999999999999999
Q ss_pred CeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEEEEEEEEEEEECCeEeeeeEEEEEEeeCCcccccc
Q 010696 103 NLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLAL 181 (503)
Q Consensus 103 ~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~ 181 (503)
++||+|..|. ...|..|+.|||++|+||+.. +.|.+.|++|++.|.+++|+|++|+..++++.||++....+..+...
T Consensus 81 ~lWV~s~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~~~~Fg~a~~~~~~~~~~~ 159 (370)
T 3psg_A 81 NLWVPSVYCS-SLACSDHNQFNPDDSSTFEATSQELSITYGTGSMTGILGYDTVQVGGISDTNQIFGLSETEPGSFLYYA 159 (370)
T ss_dssp CEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEESSSCEEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGC
T ss_pred ccEEECCCCC-CcccCCCCCCCCccCcCcEECCcEEEEEeCCceEEEEEEEEEEeeCCcccCCeEEEEEEeecccccccC
Confidence 9999999997 668999999999999999999 99999999999999999999999999999999999998776667778
Q ss_pred ccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEE
Q 010696 182 QFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIK 261 (503)
Q Consensus 182 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~ 261 (503)
.+|||||||++..+.....|++++|++||+|++++||+||++.. ..+|+|+|||+|+++|.|+++|+|+.++++|.|.
T Consensus 160 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~--~~~G~l~fGg~D~~~y~g~l~~~pv~~~~~w~v~ 237 (370)
T 3psg_A 160 PFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSND--DSGSVVLLGGIDSSYYTGSLNWVPVSVEGYWQIT 237 (370)
T ss_dssp SCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-------CEEEEETCCCGGGBSSCCEEEECSEETTEEEE
T ss_pred CccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCC--CCCeEEEEEeeChHhcCCcceeecccccceeEEE
Confidence 89999999999988777889999999999999999999999862 3489999999999999999999999999999999
Q ss_pred EeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCccccc
Q 010696 262 VGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSD 341 (503)
Q Consensus 262 l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 341 (503)
+++|+|+++.+. +..++.+|+||||+++++|.+++++|.+++++..
T Consensus 238 l~~i~v~g~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~--------------------------------- 283 (370)
T 3psg_A 238 LDSITMDGETIA-CSGGCQAIVDTGTSLLTGPTSAIANIQSDIGASE--------------------------------- 283 (370)
T ss_dssp ECEEESSSSEEE-CTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCEE---------------------------------
T ss_pred EeEEEECCEEEe-cCCCceEEEcCCCCcEECCHHHHHHHHHHhCCcc---------------------------------
Confidence 999999998775 5678999999999999999999999999997651
Q ss_pred CcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEe
Q 010696 342 IGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFIN 421 (503)
Q Consensus 342 ~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~ 421 (503)
...|.|.+|
T Consensus 284 -----------------------------------------------------------------------~~~g~~~v~ 292 (370)
T 3psg_A 284 -----------------------------------------------------------------------NSDGEMVIS 292 (370)
T ss_dssp -----------------------------------------------------------------------CTTCCEECC
T ss_pred -----------------------------------------------------------------------cCCCcEEEE
Confidence 235679999
Q ss_pred CCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEe
Q 010696 422 CDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAE 501 (503)
Q Consensus 422 C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~ 501 (503)
|+.+..+|+|+|+|+|++++|++++|+++ . .+.|+++|...+.+++.++.||||++|||++|+|||++|+|||||+
T Consensus 293 C~~~~~lP~i~f~~~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfA~ 368 (370)
T 3psg_A 293 CSSIDSLPDIVFTIDGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGLAP 368 (370)
T ss_dssp GGGGGGCCCEEEEETTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred CCCcccCCcEEEEECCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEEEE
Confidence 99888999999999999999999999998 2 2469999998776554556899999999999999999999999999
Q ss_pred cC
Q 010696 502 AA 503 (503)
Q Consensus 502 ~~ 503 (503)
|+
T Consensus 369 a~ 370 (370)
T 3psg_A 369 VA 370 (370)
T ss_dssp BC
T ss_pred cC
Confidence 86
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.8e-71 Score=571.95 Aligned_cols=366 Identities=37% Similarity=0.751 Sum_probs=297.9
Q ss_pred ceEEEeeeeeccchhhHHHhcc-cccccc-c----ccc-CCCCceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCC
Q 010696 31 GLLRIQLKKRQLGINTINAARL-ITKNEV-H----NRF-NHPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSN 103 (503)
Q Consensus 31 ~~~~ipL~~~~~~~~~~~~~~~-~~~~~~-~----~~~-~~~~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~ 103 (503)
+++||||+|+++.|+.+++.+. +.+..+ + ... .......+||.|+.+.+|+++|+||||||+|+|+|||||++
T Consensus 7 ~~~~i~l~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~ 86 (383)
T 2x0b_A 7 TFKRIFLKRMPSIRESLKERGVDMARLGPEWSQPMKRLTLGNTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSN 86 (383)
T ss_dssp --------------------------------------------CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCC
T ss_pred cEEEEEEEECCcHHHHHHHhCchHHHHHHhhccccccccccCCcceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCC
Confidence 4789999999998888776654 221110 0 000 01234569999999999999999999999999999999999
Q ss_pred eeEeCCCCCC-CcccccCCcccCCCCcccccc-ceeEEEeeceeEEEEEEEEEEEECCeEeeeeEEEEEEeeCCcccccc
Q 010696 104 LWVPSSKCLF-SISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLAL 181 (503)
Q Consensus 104 ~wV~~~~C~~-~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~ 181 (503)
+||+|..|.. ...|..|+.|||++|+||+.. +.|.+.|++|++.|.+++|+|++|+..++ +.||+++...+..|...
T Consensus 87 lWV~s~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~g~~f~~~ 165 (383)
T 2x0b_A 87 VWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYSTGTVSGFLSQDIITVGGITVT-QMFGEVTEMPALPFMLA 165 (383)
T ss_dssp EEEEBTTSCTTSHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEEEEEEEEEEEETTEEEE-EEEEEEEECCHHHHTTC
T ss_pred eEEeccCCCCCcccccCCCCCCCCCCCcEEECCcEEEEEcCCccEEEEEEeeEEEEcCceEE-EEEEEEEecCCcccccC
Confidence 9999999962 257999999999999999999 99999999999999999999999999999 99999998766556677
Q ss_pred ccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCCCCC--CccEEEeCcccCCCcccCeeEEecccccceE
Q 010696 182 QFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSE--VGGEIIFGGFDWRHFRGSHIYVPITEKGYWQ 259 (503)
Q Consensus 182 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~--~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~ 259 (503)
.+|||||||++..+.....|++++|++||+|.+++||+||++..... .+|+|+|||+|+++|.|+++|+|+.++++|.
T Consensus 166 ~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~~~w~ 245 (383)
T 2x0b_A 166 EFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQ 245 (383)
T ss_dssp SSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSSTTSCE
T ss_pred CCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCCceEE
Confidence 88999999999888777889999999999999999999999864321 3899999999999999999999999999999
Q ss_pred EEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCccc
Q 010696 260 IKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVC 339 (503)
Q Consensus 260 v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ 339 (503)
|.+++|.|+++.+. +..++.+|+||||+++++|.+++++|.+++++.
T Consensus 246 v~l~~i~v~~~~~~-~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~-------------------------------- 292 (383)
T 2x0b_A 246 IQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKLMEALGAK-------------------------------- 292 (383)
T ss_dssp EEECEEEESSCCCB-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCE--------------------------------
T ss_pred EEEeEEEeCCceEE-cCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc--------------------------------
Confidence 99999999998753 567899999999999999999999999999765
Q ss_pred ccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceE
Q 010696 340 SDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSF 419 (503)
Q Consensus 340 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~ 419 (503)
+ ..|.|.
T Consensus 293 ------------------------------------------------------------------------~-~~g~~~ 299 (383)
T 2x0b_A 293 ------------------------------------------------------------------------K-RLFDYV 299 (383)
T ss_dssp ------------------------------------------------------------------------E-CSSCEE
T ss_pred ------------------------------------------------------------------------c-cCCcEE
Confidence 1 246689
Q ss_pred EeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEE
Q 010696 420 INCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGF 499 (503)
Q Consensus 420 ~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGf 499 (503)
++|+.+..+|+|+|+|+|++++|+|++|+++..+.+...|+++|...+++++.++.||||++|||++|+|||++|+||||
T Consensus 300 v~C~~~~~~P~i~f~~~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~rIGf 379 (383)
T 2x0b_A 300 VKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGF 379 (383)
T ss_dssp EEGGGTTTCCCEEEEETTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEE
T ss_pred EeccccccCceEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEeE
Confidence 99998889999999999999999999999986544456899999988765555679999999999999999999999999
Q ss_pred EecC
Q 010696 500 AEAA 503 (503)
Q Consensus 500 a~~~ 503 (503)
|+++
T Consensus 380 A~a~ 383 (383)
T 2x0b_A 380 ALAR 383 (383)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 9986
No 4
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=4.1e-65 Score=520.51 Aligned_cols=331 Identities=42% Similarity=0.828 Sum_probs=292.4
Q ss_pred CceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeece
Q 010696 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSG 144 (503)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~g 144 (503)
+...+||.|+.+..|+++|+||||||+++|++||||+++||+|..|. ...|..++.|||++|+||+.. +.|.+.|++|
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 89 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSVYCT-SPACKTHSRFQPSQSSTYSQPGQSFSIQYGTG 89 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SGGGTTSCCBCGGGCTTCBCCSCEEEEESSSC
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-ccccCCCCcCCcccCcceEECCCEEEEEeCCC
Confidence 34458999988999999999999999999999999999999999997 468999999999999999999 9999999999
Q ss_pred eEEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCC
Q 010696 145 QISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQD 224 (503)
Q Consensus 145 s~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~ 224 (503)
++.|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||++.
T Consensus 90 s~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~ 169 (351)
T 1tzs_A 90 SLSGIIGADQVSVEGLTVVGQQFGESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSN 169 (351)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCC
T ss_pred CeEEEEEEeEEEECCeEECCeEEEEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCC
Confidence 99999999999999999999999999887665566678899999999988777778999999999999999999999986
Q ss_pred CCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHh
Q 010696 225 PNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAI 304 (503)
Q Consensus 225 ~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l 304 (503)
......|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +..+..+||||||+++++|.+++++|.+++
T Consensus 170 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~ 248 (351)
T 1tzs_A 170 PEGGAGSELIFGGYDHSHFSGSLNWVPVTKQAYWQIALDNIQVGGTVMF-CSEGCQAIVDTGTSLITGPSDKIKQLQNAI 248 (351)
T ss_dssp C--CTTCEEEETSCCGGGBCSCCEEEECSEETTEEEEEEEEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHHHHHH
T ss_pred CCCCCCCEEEECCCCHHHcCCceEEEecCCCceEEEEeCEEEECCceEE-cCCCceEEeccCCcceeCCHHHHHHHHHHh
Confidence 4333489999999999999999999999999999999999999998753 567789999999999999999999999998
Q ss_pred CCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHH
Q 010696 305 GAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIV 384 (503)
Q Consensus 305 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (503)
++..
T Consensus 249 ~~~~---------------------------------------------------------------------------- 252 (351)
T 1tzs_A 249 GAAP---------------------------------------------------------------------------- 252 (351)
T ss_dssp TCEE----------------------------------------------------------------------------
T ss_pred CCcc----------------------------------------------------------------------------
Confidence 6550
Q ss_pred HHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeE
Q 010696 385 FWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFI 464 (503)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~ 464 (503)
.. |.|.++|+.+..+|+|+|+|+|.+++|+|++|+++..+.+...|+++|.
T Consensus 253 ----------------------------~~-g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~yi~~~~~~~~~~C~~~~~ 303 (351)
T 1tzs_A 253 ----------------------------VD-GEYAVECANLNVMPDVTFTINGVPYTLSPTAYTLLDFVDGMQFCSSGFQ 303 (351)
T ss_dssp ----------------------------CS-SSEEECGGGGGGSCCEEEEETTEEEEECTTTSEECC-----CCEEESEE
T ss_pred ----------------------------cC-CeEEEeCCCCccCCcEEEEECCEEEEECHHHhEeeccCCCCCeEEEEEE
Confidence 11 6688999988889999999999999999999999765433468999998
Q ss_pred eccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 465 ALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 465 ~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
..+.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 304 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~rigfA~~~ 342 (351)
T 1tzs_A 304 GLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRVGLAPAV 342 (351)
T ss_dssp ECCCCTTTCSCEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred ECCCCCCCCCeEEEChHHhhheEEEEECCCCEEEEEECC
Confidence 876544455789999999999999999999999999975
No 5
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=4.8e-65 Score=518.13 Aligned_cols=332 Identities=39% Similarity=0.816 Sum_probs=297.3
Q ss_pred CCceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCC-CcccccCCcccCCCCcccccc-ceeEEEee
Q 010696 65 PKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLF-SISCYLHSRYRARLSRTYTKI-VPCKIHYG 142 (503)
Q Consensus 65 ~~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~-~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg 142 (503)
++...+||.|+.|.+|+++|+||||||+++|++||||+++||+|..|.. ...|..++.|+|++|+||++. +.|.+.|+
T Consensus 5 ~~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg 84 (341)
T 3k1w_A 5 NTTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRLYTACVYHKLFDASDSSSYKHNGTELTLRYS 84 (341)
T ss_dssp CBCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEEET
T ss_pred CCCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCCCCcccCCCCCCCCcCcCeeECCCEEEEEEC
Confidence 3577899999999999999999999999999999999999999999962 347988999999999999998 99999999
Q ss_pred ceeEEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEec
Q 010696 143 SGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLN 222 (503)
Q Consensus 143 ~gs~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~ 222 (503)
+|++.|.+++|+|+|++.++ ++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||+
T Consensus 85 ~gs~~G~~~~D~v~ig~~~v-~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~ 163 (341)
T 3k1w_A 85 TGTVSGFLSQDIITVGGITV-TQMFGEVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYN 163 (341)
T ss_dssp TEEEEEEEEEEEEEETTEEE-EEEEEEEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEEC
T ss_pred CcEEEEEEEEEEEEECCcee-eEEEEEEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEe
Confidence 99999999999999999999 99999999877644666778999999999888777889999999999999999999999
Q ss_pred CCC--CCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHH
Q 010696 223 QDP--NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQI 300 (503)
Q Consensus 223 ~~~--~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 300 (503)
+.. .....|+|+|||+|+++|.|+++|+|+.+.++|.|.+++|.++++.+. +..+..++|||||+++++|.+++++|
T Consensus 164 ~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i 242 (341)
T 3k1w_A 164 RDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKTGVWQIQMKGVSVGSSTLL-CEDGCLALVDTGASYISGSTSSIEKL 242 (341)
T ss_dssp CCC-----CCEEEEESSCCGGGEEEEEEEEECSSTTSCEEEECCEEETTEEEE-CTTCEEEEECTTCSSEEECHHHHHHH
T ss_pred CCCCcCCCCCCEEEECccChHHccCceEEEecCCCCEEEEEEeEEEECCEEee-cCCCCEEEEECCCChhcCCHHHHHHH
Confidence 864 223489999999999999999999999999999999999999998753 46678999999999999999999999
Q ss_pred HHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhh
Q 010696 301 NHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFC 380 (503)
Q Consensus 301 ~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (503)
.+++++..
T Consensus 243 ~~~~~~~~------------------------------------------------------------------------ 250 (341)
T 3k1w_A 243 MEALGAKK------------------------------------------------------------------------ 250 (341)
T ss_dssp HHHHTCEE------------------------------------------------------------------------
T ss_pred HHHcCCee------------------------------------------------------------------------
Confidence 99997650
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEE
Q 010696 381 EMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICI 460 (503)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~ 460 (503)
...| |.+||+....+|+|+|+|+|.+++|+|++|+++..+.....|+
T Consensus 251 --------------------------------~~~g-~~~~C~~~~~~p~i~f~f~g~~~~l~~~~~~~~~~~~~~~~C~ 297 (341)
T 3k1w_A 251 --------------------------------RLFD-YVVKCNEGPTLPDISFHLGGKEYTLTSADYVFQESYSSKKLCT 297 (341)
T ss_dssp --------------------------------CSSC-EEEEGGGGGGCCCEEEEETTEEEEECHHHHBCCSCCCTTSEEE
T ss_pred --------------------------------cCCC-eEEeCCCCCcCCcEEEEECCEEEEECHHHheeEccCCCCCeEE
Confidence 1235 9999998888999999999999999999999986554467899
Q ss_pred EeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 461 SGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 461 ~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
.+|...+.++..++.||||++|||++|+|||++++|||||+++
T Consensus 298 ~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~a~ 340 (341)
T 3k1w_A 298 LAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNRIGFALAR 340 (341)
T ss_dssp BSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred eEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCEEEEEECC
Confidence 9999876554556789999999999999999999999999986
No 6
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.3e-64 Score=511.21 Aligned_cols=320 Identities=38% Similarity=0.744 Sum_probs=288.8
Q ss_pred ceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeecee
Q 010696 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ 145 (503)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs 145 (503)
...+||.|+.+.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|||++|+||+.. +.|.+.|++|+
T Consensus 3 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (323)
T 3cms_A 3 VASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSIYCK-SNACKNHQRFDPRKSSTFQNLGKPLSIHYGTGS 81 (323)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred cceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCCCCC-cccccCCCCCCCccCCCeEECCcEEEEEeCCCC
Confidence 4568999999999999999999999999999999999999999995 458999999999999999999 99999999999
Q ss_pred EEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCC
Q 010696 146 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDP 225 (503)
Q Consensus 146 ~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~ 225 (503)
+.|.+++|+|++++.+++++.||++....+..|....++||||||++..+.....+++++|++||.|.+++||+||++..
T Consensus 82 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~ 161 (323)
T 3cms_A 82 MQGILGYDTVTVSNIVDIQQTVGLSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNG 161 (323)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTS
T ss_pred eEEEEEEEEEEECCeEEeccEEEEEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCC
Confidence 99999999999999999999999999876644555678999999999888777889999999999999999999998863
Q ss_pred CCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhC
Q 010696 226 NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 305 (503)
Q Consensus 226 ~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~ 305 (503)
. .|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +..+..++|||||+++++|.+++++|.++++
T Consensus 162 ~---~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 162 Q---ESMLTLGAIDPSYYTGSLHWVPVTVQQYWQFTVDSVTISGVVVA-CEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp S---CEEEEESCCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE-STTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred C---CEEEEECCCChhhccCceEEEECccCCeEEEEEeeEEECCEEee-cCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 2 49999999999999999999999999999999999999998764 4567899999999999999999999999986
Q ss_pred CccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHH
Q 010696 306 AEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVF 385 (503)
Q Consensus 306 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (503)
+..
T Consensus 238 ~~~----------------------------------------------------------------------------- 240 (323)
T 3cms_A 238 ATQ----------------------------------------------------------------------------- 240 (323)
T ss_dssp CEE-----------------------------------------------------------------------------
T ss_pred Cee-----------------------------------------------------------------------------
Confidence 541
Q ss_pred HHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEe
Q 010696 386 WIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIA 465 (503)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~ 465 (503)
...|.|.++|+.+..+|+|+|+|+|.+++|+|++|+++ ....|+.+|..
T Consensus 241 ---------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~----~~~~C~~~i~~ 289 (323)
T 3cms_A 241 ---------------------------NQYGEFDIDCDNLSYMPTVVFEINGKMYPLTPSAYTSQ----DQGFCTSGFQS 289 (323)
T ss_dssp ---------------------------ETTTEEEECTTCTTTSCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEE
T ss_pred ---------------------------cCCCcEEEECCCCccCceEEEEECCEEEEECHHHhccC----CCCEEEEEEEe
Confidence 12466889999888999999999999999999999998 23589998886
Q ss_pred ccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 466 LDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 466 ~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
.+ .++.||||++|||++|+|||++++|||||+++
T Consensus 290 ~~----~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 290 EN----HSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp C-------CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CC----CCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 53 34689999999999999999999999999986
No 7
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=1.3e-64 Score=512.48 Aligned_cols=326 Identities=39% Similarity=0.771 Sum_probs=292.0
Q ss_pred ceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeecee
Q 010696 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ 145 (503)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs 145 (503)
...+||.|+.+..|+++|+||||||+++|++||||+++||+|..|. ...|..++.|||++|+||+.. +.|.+.|++|+
T Consensus 2 ~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 80 (329)
T 1dpj_A 2 GHDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECG-SLACFLHSKYDHEASSSYKANGTEFAIQYGTGS 80 (329)
T ss_dssp CEEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEE
T ss_pred CcceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCC-CcccCCcCcCCcccCcCeEECCcEEEEEECCce
Confidence 3468999999999999999999999999999999999999999997 446998999999999999998 99999999999
Q ss_pred EEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCC
Q 010696 146 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDP 225 (503)
Q Consensus 146 ~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~ 225 (503)
+.|.+++|+|++++.+++++.||+++...+..|....++||||||++..+.....+++++|++||+|++++||+||.+..
T Consensus 81 ~~G~~~~D~v~ig~~~~~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~ 160 (329)
T 1dpj_A 81 LEGYISQDTLSIGDLTIPKQDFAEATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTS 160 (329)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGG
T ss_pred EEEEEEEEEEEECCeEECCeEEEEEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCC
Confidence 99999999999999999999999999876534556678999999999887667788999999999999999999998753
Q ss_pred C-CCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHh
Q 010696 226 N-SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAI 304 (503)
Q Consensus 226 ~-~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l 304 (503)
. ...+|+|+|||+|+++|.|++.|+|+.++++|.|.+++|+|+++.+. ..+..++|||||+++++|++++++|.+++
T Consensus 161 ~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~~ 238 (329)
T 1dpj_A 161 KDTENGGEATFGGIDESKFKGDITWLPVRRKAYWEVKFEGIGLGDEYAE--LESHGAAIDTGTSLITLPSGLAEMINAEI 238 (329)
T ss_dssp GTCSSSEEEEESSCCGGGEEEEEEEEECSSBTTBEEEEEEEEETTEEEE--CSSCEEEECTTCSCEEECHHHHHHHHHHH
T ss_pred CCCCCCcEEEEcCCChhhcCCceEEEEcCCCceEEEEeeeEEECCeEec--CCCccEEeeCCCCcEECCHHHHHHHHHHh
Confidence 1 23479999999999999999999999999999999999999998764 35688999999999999999999999998
Q ss_pred CCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHH
Q 010696 305 GAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIV 384 (503)
Q Consensus 305 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (503)
++.
T Consensus 239 ~~~----------------------------------------------------------------------------- 241 (329)
T 1dpj_A 239 GAK----------------------------------------------------------------------------- 241 (329)
T ss_dssp TCE-----------------------------------------------------------------------------
T ss_pred CCc-----------------------------------------------------------------------------
Confidence 654
Q ss_pred HHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeE
Q 010696 385 FWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFI 464 (503)
Q Consensus 385 ~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~ 464 (503)
+...|.|.++|+....+|+|+|+|+|.+++|+|++|+++.. ..|+++|.
T Consensus 242 ---------------------------~~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----~~C~~~~~ 290 (329)
T 1dpj_A 242 ---------------------------KGWTGQYTLDCNTRDNLPDLIFNFNGYNFTIGPYDYTLEVS----GSCISAIT 290 (329)
T ss_dssp ---------------------------ECTTSSEEECGGGGGGCCCEEEEETTEEEEECTTTSEEEET----TEEEECEE
T ss_pred ---------------------------cCCCCeEEEECCCCCcCCcEEEEECCEEEEECHHHhEecCC----CEEEEEEE
Confidence 02356789999988889999999999999999999999753 47999998
Q ss_pred eccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 465 ALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 465 ~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
..+.+.+.++.||||++|||++|+|||++|+|||||+++
T Consensus 291 ~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 329 (329)
T 1dpj_A 291 PMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVGLAKAI 329 (329)
T ss_dssp ECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ecccCCCCCCcEEEChHHhcceEEEEECCCCEEEEEECC
Confidence 876544456789999999999999999999999999985
No 8
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=8.9e-65 Score=511.70 Aligned_cols=318 Identities=41% Similarity=0.762 Sum_probs=284.5
Q ss_pred eEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEE
Q 010696 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQIS 147 (503)
Q Consensus 69 ~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~ 147 (503)
.+||.|+.|.+|+++|+||||||+++|++||||+++||+|..|. ...|..++.|||++|+||+.. +.+.+.|++|++.
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 80 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSIYCK-SNVCKNHHRFDPRKSSTFRNLGKPLSIHYGTGSME 80 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCCCCC-ccccCCCCCCCCCCCcCeEcCCcEEEEEECCcEEE
Confidence 47899999999999999999999999999999999999999997 567999999999999999999 9999999999999
Q ss_pred EEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCCCC
Q 010696 148 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 227 (503)
Q Consensus 148 G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~ 227 (503)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|++++||+||++.
T Consensus 81 G~~~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~--- 157 (320)
T 4aa9_A 81 GFLGYDTVTVSNIVDPNQTVGLSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRN--- 157 (320)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSS---
T ss_pred EEEEEEEEEECCEeecCeEEEEEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCC---
Confidence 99999999999999999999999987765566677899999999988877788999999999999999999999985
Q ss_pred CCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCc
Q 010696 228 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 307 (503)
Q Consensus 228 ~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~ 307 (503)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.++++.+. +..+..++|||||+++++|++++++|.+++++.
T Consensus 158 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~-~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~ 236 (320)
T 4aa9_A 158 GQGSMLTLGAIDPSYYTGSLHWVPVTLQQYWQFTVDSVTINGVAVA-CVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT 236 (320)
T ss_dssp SSCCEEEETCCCGGGEEEEEEEEECSSBTTBEEEECEEEETTEEEE-STTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE
T ss_pred CCCeEEEEcccCHHHccCceEEEEcccCCceEEEEeEEEECCEEec-cCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999999999999999999998875 456789999999999999999999999998654
Q ss_pred cccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHH
Q 010696 308 GIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWI 387 (503)
Q Consensus 308 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (503)
.
T Consensus 237 ~------------------------------------------------------------------------------- 237 (320)
T 4aa9_A 237 E------------------------------------------------------------------------------- 237 (320)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred c-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEecc
Q 010696 388 QMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALD 467 (503)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~ 467 (503)
...|.|.++|+....+|+|+|+|+|.+++|+|++|+.+ ....|+++|...
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~----~~~~C~~~i~~~- 287 (320)
T 4aa9_A 238 -------------------------NRYGEFDVNCGNLRSMPTVVFEINGRDYPLSPSAYTSK----DQGFCTSGFQGD- 287 (320)
T ss_dssp -------------------------CTTSCEEECGGGGGGCCCEEEEETTEEEEECHHHHEEE----ETTEEEESEEEE-
T ss_pred -------------------------cCCCcEEEeCCCCCcCceEEEEECCEEEEECHHHhccC----CCCeEEEEEEcC-
Confidence 12467999999888899999999999999999999976 235899988762
Q ss_pred CCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 468 VPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 468 ~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
..++.||||++|||++|+|||++++|||||+++
T Consensus 288 ---~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 288 ---NNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp ---TTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred ---CCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 234679999999999999999999999999986
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2.8e-64 Score=508.94 Aligned_cols=321 Identities=39% Similarity=0.730 Sum_probs=290.1
Q ss_pred eEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEE
Q 010696 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQIS 147 (503)
Q Consensus 69 ~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~ 147 (503)
.+||.|+.+..|+++|+||||||+++|++||||+++||+|..|. +..|..++.|||++|+||+.. +.|.+.|++|++.
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~ 81 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSSHCS-AQACSNHNKFKPRQSSTYVETGKTVDLTYGTGGMR 81 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCEEE
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecCCCC-cccccCCCcCCCccCCCeEeCCcEEEEEECCCCeE
Confidence 57999999999999999999999999999999999999999997 457998999999999999998 9999999999999
Q ss_pred EEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCCCC
Q 010696 148 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 227 (503)
Q Consensus 148 G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~ 227 (503)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||++..
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-- 159 (324)
T 1am5_A 82 GILGQDTVSVGGGSDPNQELGESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGG-- 159 (324)
T ss_dssp EEEEEEEEESSSSCEEEEEEEEEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTT--
T ss_pred EEEEECceeECCcEEcccEEEEEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCC--
Confidence 999999999999999999999999876655666788999999999887777788999999999999999999998863
Q ss_pred CCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCc
Q 010696 228 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 307 (503)
Q Consensus 228 ~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~ 307 (503)
...|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +.. ..++|||||+++++|++++++|.+++++.
T Consensus 160 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~-~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 237 (324)
T 1am5_A 160 ANGSEVMLGGVDNSHYTGSIHWIPVTAEKYWQVALDGITVNGQTAA-CEG-CQAIVDTGTSKIVAPVSALANIMKDIGAS 237 (324)
T ss_dssp CSCEEEEESSCCGGGBCSCCEEEEEEEETTEEEEECEEEETTEECC-CCC-EEEEECTTCSSEEECTTTHHHHHHHHTCE
T ss_pred CCCcEEEECccCHHHcCCceEEEecCCCcEEEEEEeEEEECCceee-ccC-ceEEEecCCccEECCHHHHHHHHHHhCCc
Confidence 2389999999999999999999999989999999999999998753 333 88999999999999999999999988542
Q ss_pred cccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHH
Q 010696 308 GIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWI 387 (503)
Q Consensus 308 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (503)
T Consensus 238 -------------------------------------------------------------------------------- 237 (324)
T 1am5_A 238 -------------------------------------------------------------------------------- 237 (324)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEecc
Q 010696 388 QMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALD 467 (503)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~ 467 (503)
...|.|.++|+.+..+|+|+|+|+|.+++|+|++|+++. ...|+++|...+
T Consensus 238 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~----~~~C~~~~~~~~ 288 (324)
T 1am5_A 238 -------------------------ENQGEMMGNCASVQSLPDITFTINGVKQPLPPSAYIEGD----QAFCTSGLGSSG 288 (324)
T ss_dssp -------------------------ECCCCEECCTTSSSSSCCEEEEETTEEEEECHHHHEEES----SSCEEECEEECC
T ss_pred -------------------------ccCCcEEEeCCCcccCCcEEEEECCEEEEECHHHhcccC----CCeEEEEEEECc
Confidence 013568899998889999999999999999999999975 358999998876
Q ss_pred CCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 468 VPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 468 ~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
.+.+.++.||||++|||++|+|||++++|||||+++
T Consensus 289 ~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~a~ 324 (324)
T 1am5_A 289 VPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAPAA 324 (324)
T ss_dssp SCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCcEEEChHHhccEEEEEECCCCEEEEEECC
Confidence 544455789999999999999999999999999986
No 10
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=2.2e-64 Score=510.74 Aligned_cols=324 Identities=39% Similarity=0.796 Sum_probs=291.1
Q ss_pred eEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEE
Q 010696 69 VVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQIS 147 (503)
Q Consensus 69 ~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~ 147 (503)
.+||. +.+..|+++|.||||||+++|++||||+++||+|..|. ...|..++.|||++|+||+.. +.|.+.|++|++.
T Consensus 4 ~~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~gs~~ 81 (329)
T 1htr_B 4 YEPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSVYCQ-SQACTSHSRFNPSESSTYSTNGQTFSLQYGSGSLT 81 (329)
T ss_dssp CCGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-SHHHHTSCCBCGGGCTTCEEEEEEEEEEETTEEEE
T ss_pred eeeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-CcccCCCCcCCCccCCCeEECCcEEEEEeCCCCeE
Confidence 47888 88999999999999999999999999999999999996 457998999999999999998 9999999999999
Q ss_pred EEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCCCC
Q 010696 148 GFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNS 227 (503)
Q Consensus 148 G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~ 227 (503)
|.+++|+|++++.+++++.||++....+..+....++||||||++..+.....+++++|++||+|.+++||+||++...
T Consensus 82 G~~~~D~v~~g~~~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~- 160 (329)
T 1htr_B 82 GFFGYDTLTVQSIQVPNQEFGLSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQG- 160 (329)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCS-
T ss_pred EEEEeeeEEEcceEECceEEEEEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCC-
Confidence 9999999999999999999999988766556667889999999998887778899999999999999999999988632
Q ss_pred CCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCc
Q 010696 228 EVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAE 307 (503)
Q Consensus 228 ~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~ 307 (503)
...|+|+|||+|+++|.|++.|+|+.++++|.|.+++|+|+++.+..+..+..++|||||+++++|++++++|.+++++.
T Consensus 161 ~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~ 240 (329)
T 1htr_B 161 SSGGAVVFGGVDSSLYTGQIYWAPVTQELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQ 240 (329)
T ss_dssp SEEEEEEESSCCGGGEEEEEEEEEBCSSSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCE
T ss_pred CCCcEEEEcccCHHHcCCceEEEECCCCceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCe
Confidence 23799999999999999999999999999999999999999987543456789999999999999999999999998755
Q ss_pred cccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHH
Q 010696 308 GIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWI 387 (503)
Q Consensus 308 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 387 (503)
.
T Consensus 241 ~------------------------------------------------------------------------------- 241 (329)
T 1htr_B 241 E------------------------------------------------------------------------------- 241 (329)
T ss_dssp E-------------------------------------------------------------------------------
T ss_pred e-------------------------------------------------------------------------------
Confidence 0
Q ss_pred HHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEecc
Q 010696 388 QMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALD 467 (503)
Q Consensus 388 ~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~ 467 (503)
...|.|.++|+.+..+|+|+|+|+|.+++|+|++|+++.. +.|+++|...+
T Consensus 242 -------------------------~~~g~~~~~C~~~~~~P~i~f~f~g~~~~i~~~~y~~~~~----g~C~~~~~~~~ 292 (329)
T 1htr_B 242 -------------------------DEYGQFLVNCNSIQNLPSLTFIINGVEFPLPPSSYILSNN----GYCTVGVEPTY 292 (329)
T ss_dssp -------------------------CTTSCEEECGGGGGGSCCEEEEETTEEEEECHHHHEEECS----SCEEESEEEEC
T ss_pred -------------------------cCCCeEEEeCCCcccCCcEEEEECCEEEEECHHHhcccCC----CEEEEEEEECC
Confidence 1245688999988889999999999999999999999754 38999998776
Q ss_pred CCCCCCC-eEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 468 VPPPQGP-LWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 468 ~~~~~~~-~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
.+.+.++ .||||++|||++|+|||++++|||||+++
T Consensus 293 ~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 329 (329)
T 1htr_B 293 LSSQNGQPLWILGDVFLRSYYSVYDLGNNRVGFATAA 329 (329)
T ss_dssp CCCTTSSCEEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCceEEEChHHhccEEEEEECCCCEEEEEeCC
Confidence 5444456 89999999999999999999999999986
No 11
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.9e-63 Score=521.35 Aligned_cols=322 Identities=32% Similarity=0.585 Sum_probs=288.3
Q ss_pred CCCceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEee
Q 010696 64 HPKADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYG 142 (503)
Q Consensus 64 ~~~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg 142 (503)
.+....+||.|+.+.+|+++|+||||||++.|++||||+++||+|..|. +..|..++.|||++|+||++. +.+.+.|+
T Consensus 123 ~~~~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~~C~-s~~C~~~~~ydps~SsT~~~~~~~f~i~Yg 201 (451)
T 3qvc_A 123 GSEFDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSIKCT-SESCESKNHYDSSKSKTYEKDDTPVKLTSK 201 (451)
T ss_dssp ----CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBTTCC-SGGGTTSCCBCGGGCTTCEEEEEEEEEECS
T ss_pred cccCCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecCCCC-ccccCCCCCCCCCCCcccccCCCEEEEEEC
Confidence 4467789999999999999999999999999999999999999999996 568999999999999999998 99999999
Q ss_pred ceeEEEEEEEEEEEECCeEeeeeEEEEEEe----eCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEE
Q 010696 143 SGQISGFFSQDNVKIGDMIIKDQEFVEVTK----EGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFS 218 (503)
Q Consensus 143 ~gs~~G~~~~D~v~lg~~~i~~~~Fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS 218 (503)
+|++.|.+++|+|++|+.+++ +.||+++. .++ +....++||||||++..+.....+++++|++||+|++++||
T Consensus 202 dGs~~G~~~~Dtv~igg~~v~-~~Fg~a~~t~~~~~~--f~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS 278 (451)
T 3qvc_A 202 AGTISGIFSKDLVTIGKLSVP-YKFIEMTEIVGFEPF--YSESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYS 278 (451)
T ss_dssp SEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEECTTH--HHHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEE
T ss_pred CCEEEEEEEEEEEEECCEEEE-EEEEEEEeccccCCC--ccCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEE
Confidence 999999999999999999999 99999988 544 55667899999999988877788999999999999999999
Q ss_pred EEecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHH
Q 010696 219 LWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVA 298 (503)
Q Consensus 219 l~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~ 298 (503)
+||++.. ..+|+|+|||+|+++|.|+++|+|+.++++|.|.++ |.|++. +..+..++|||||+++++|+++++
T Consensus 279 ~~L~~~~--~~~G~l~fGgiD~s~y~G~l~~~pv~~~~~w~v~l~-I~Vgg~----~~~~~~aiiDSGTt~i~lP~~~~~ 351 (451)
T 3qvc_A 279 IYLPPEN--KNKGYLTIGGIEERFFDGPLNYEKLNHDLMWQVDLD-VHFGNV----SSKKANVILDSATSVITVPTEFFN 351 (451)
T ss_dssp EECCTTC--TTEEEEEESSCCGGGEEEEEEEEECSSTTSSEEEEE-EEETTE----EEEEEEEEECTTBSSEEECHHHHH
T ss_pred EEEcCCC--CCCCEEEECCcchhhcCCceEEEEcccCCeeEEEEE-EEECCc----cCCCceEEEeCCCccccCCHHHHH
Confidence 9999873 248999999999999999999999999999999999 999998 245678999999999999999999
Q ss_pred HHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccch
Q 010696 299 QINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCA 378 (503)
Q Consensus 299 ~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (503)
+|.+++++..
T Consensus 352 ~i~~~i~a~~---------------------------------------------------------------------- 361 (451)
T 3qvc_A 352 QFVESASVFK---------------------------------------------------------------------- 361 (451)
T ss_dssp HHHTTTTCEE----------------------------------------------------------------------
T ss_pred HHHHHcCCee----------------------------------------------------------------------
Confidence 9999886551
Q ss_pred hhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCccee
Q 010696 379 FCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTI 458 (503)
Q Consensus 379 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~ 458 (503)
....|.|.+||+ +..+|+|+|+|+|.+++|+|++|+++..+.....
T Consensus 362 ---------------------------------~~~~g~y~v~C~-~~~~P~itf~fgg~~i~lp~~~yi~~~~~~~~~~ 407 (451)
T 3qvc_A 362 ---------------------------------VPFLSLYVTTCG-NTKLPTLEYRSPNKVYTLEPKQYLEPLENIFSAL 407 (451)
T ss_dssp ---------------------------------CTTSSCEEEETT-CTTCCCEEEEETTEEEEECHHHHEEECTTTSTTE
T ss_pred ---------------------------------cCCCCeEEeeCC-cCcCCcEEEEECCEEEEEcHHHheeecccCCCCe
Confidence 112577999999 7899999999999999999999999876545578
Q ss_pred EEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 459 CISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 459 C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
|+++|...+.+ ++.||||++|||++|+|||++++|||||+++
T Consensus 408 C~~~i~~~~~~---~~~~ILG~~FLr~~YvVfD~~n~rIGfA~ak 449 (451)
T 3qvc_A 408 CMLNIVPIDLE---KNTFVLGDPFMRKYFTVYDYDNHTVGFALAK 449 (451)
T ss_dssp EEECEEECCCS---TTEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99999875421 4689999999999999999999999999986
No 12
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=2.9e-63 Score=510.56 Aligned_cols=320 Identities=33% Similarity=0.657 Sum_probs=287.6
Q ss_pred CceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeece
Q 010696 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSG 144 (503)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~g 144 (503)
....+||.|+.+..|+++|+||||||++.|+|||||+++||+|..|. ...|..++.|||++|+||+.. +.|.+.|++|
T Consensus 50 ~~~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 128 (375)
T 1miq_A 50 ENDVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSKKCN-SSGCSIKNLYDSSKSKSYEKDGTKVDITYGSG 128 (375)
T ss_dssp TTBCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBTTCC-SSGGGGSCCBCGGGCTTCEEEEEEEEEEETTE
T ss_pred CcceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccCCCC-cccccCCCcCCCccCCceEECCcEEEEEeCCC
Confidence 45568999999999999999999999999999999999999999996 568999999999999999998 9999999999
Q ss_pred eEEEEEEEEEEEECCeEeeeeEEEEEEe----eCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEE
Q 010696 145 QISGFFSQDNVKIGDMIIKDQEFVEVTK----EGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLW 220 (503)
Q Consensus 145 s~~G~~~~D~v~lg~~~i~~~~Fg~~~~----~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~ 220 (503)
++.|.+++|+|++|+..+++ .||++.. .. .|....++||||||++..+.....+++++|++||+|.+++||+|
T Consensus 129 s~~G~~~~Dtv~ig~~~v~~-~Fg~~~~~~~~~~--~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~ 205 (375)
T 1miq_A 129 TVKGFFSKDLVTLGHLSMPY-KFIEVTDTDDLEP--IYSSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFY 205 (375)
T ss_dssp EEEEEEEEEEEEETTEEEEE-EEEEEEECGGGTT--HHHHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEE
T ss_pred eEEEEEEEEEEEEcCceECc-EEEEEEecccccc--ccccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEE
Confidence 99999999999999999999 9999998 44 45566789999999998887778899999999999999999999
Q ss_pred ecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHH
Q 010696 221 LNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQI 300 (503)
Q Consensus 221 l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l 300 (503)
|++.+ ...|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|+++.+ .++.+||||||+++++|.+++++|
T Consensus 206 L~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~-i~v~g~~~----~~~~aiiDSGTs~~~lP~~~~~~l 278 (375)
T 1miq_A 206 LPVHD--VHAGYLTIGGIEEKFYEGNITYEKLNHDLYWQIDLD-VHFGKQTM----EKANVIVDSGTTTITAPSEFLNKF 278 (375)
T ss_dssp CCTTC--TTEEEEEESSCCGGGEEEEEEEEEBSSSSSSEEEEE-EEETTEEE----EEEEEEECTTBSSEEECHHHHHHH
T ss_pred ecCCC--CCCeEEEEcccCHHHcCCceEEEecCCCceEEEEEE-EEECCEEc----ccceEEecCCCccEEcCHHHHHHH
Confidence 99863 248999999999999999999999999999999999 99999876 457899999999999999999999
Q ss_pred HHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhh
Q 010696 301 NHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFC 380 (503)
Q Consensus 301 ~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (503)
.+++++. +
T Consensus 279 ~~~~~~~---------------------------------------~--------------------------------- 286 (375)
T 1miq_A 279 FANLNVI---------------------------------------K--------------------------------- 286 (375)
T ss_dssp HHHHTCE---------------------------------------E---------------------------------
T ss_pred HHHhCCc---------------------------------------c---------------------------------
Confidence 9999754 0
Q ss_pred hHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEE
Q 010696 381 EMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICI 460 (503)
Q Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~ 460 (503)
+...|.|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|+
T Consensus 287 -------------------------------~~~~g~~~~~C~~-~~~P~i~f~f~g~~~~l~~~~yi~~~~~~g~~~C~ 334 (375)
T 1miq_A 287 -------------------------------VPFLPFYVTTCDN-KEMPTLEFKSANNTYTLEPEYYMNPILEVDDTLCM 334 (375)
T ss_dssp -------------------------------CTTSSCEEEETTC-TTCCCEEEECSSCEEEECGGGSEEESSSSSCSEEE
T ss_pred -------------------------------cCCCCeEEEECCC-CCCCcEEEEECCEEEEECHHHhEeeccCCCCCeEE
Confidence 1235678999997 78999999999999999999999986543446899
Q ss_pred EeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 461 SGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 461 ~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
++|...+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 335 ~~~~~~~~~---~~~~ILG~~fl~~~yvvfD~~~~riGfA~~~ 374 (375)
T 1miq_A 335 ITMLPVDID---SNTFILGDPFMRKYFTVFDYDKESVGFAIAK 374 (375)
T ss_dssp ESEEECCSS---SSEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEEECCCC---CCcEEECHHHhccEEEEEECCCCEEEEEEcC
Confidence 999876531 2689999999999999999999999999985
No 13
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=1.5e-62 Score=513.99 Aligned_cols=321 Identities=33% Similarity=0.651 Sum_probs=287.3
Q ss_pred CceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeece
Q 010696 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSG 144 (503)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~g 144 (503)
....+||.|+.+..|+++|+||||||++.|++||||+++||+|..|. ...|..++.|||++|+||+.. +.+.+.|++|
T Consensus 126 ~~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~~C~-~~~C~~~~~ydps~SsT~~~~~~~~~i~YgdG 204 (453)
T 2bju_A 126 SNDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSVKCT-TAGCLTKHLYDSSKSRTYEKDGTKVEMNYVSG 204 (453)
T ss_dssp CSEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCC-STTGGGSCCBCGGGCTTCEEEEEEEEEECSSS
T ss_pred CCCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEeccCCC-ccccCCCCcCCCccCCceeECCcEEEEEcCCC
Confidence 45679999999999999999999999999999999999999999996 568999999999999999999 9999999999
Q ss_pred eEEEEEEEEEEEECCeEeeeeEEEEEEeeC--CccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEec
Q 010696 145 QISGFFSQDNVKIGDMIIKDQEFVEVTKEG--LLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLN 222 (503)
Q Consensus 145 s~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~--~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~ 222 (503)
++.|.+++|+|++|+.+++ +.||+++... +..+....++||||||++..+.....|++++|++||.|.+++||+||+
T Consensus 205 s~~G~~~~Dtv~ig~~~v~-~~Fg~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~ 283 (453)
T 2bju_A 205 TVSGFFSKDLVTVGNLSLP-YKFIEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLP 283 (453)
T ss_dssp EEEEEEEEEEEEETTEEEE-EEEEEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECC
T ss_pred CeEEEEEEEEEEEeCcEEE-EEEEEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeC
Confidence 9999999999999999999 9999999876 544556678999999999888777889999999999999999999999
Q ss_pred CCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHH
Q 010696 223 QDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINH 302 (503)
Q Consensus 223 ~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~ 302 (503)
+.+ ..+|+|+|||+|+++|.|++.|+|+.+.++|.|.++ |.|++ .+ + .++.+||||||+++++|++++++|.+
T Consensus 284 ~~~--~~~G~l~fGg~D~~~y~G~l~~~pv~~~~~w~V~l~-I~Vgg-~~--~-~~~~aIiDSGTsl~~lP~~~~~~l~~ 356 (453)
T 2bju_A 284 VHD--KHTGFLTIGGIEERFYEGPLTYEKLNHDLYWQITLD-AHVGN-IM--L-EKANCIVDSGTSAITVPTDFLNKMLQ 356 (453)
T ss_dssp BTT--TBCEEEEESSCCGGGEEEEEEEEEEEEETTEEEEEE-EEETT-EE--E-EEEEEEECTTCCSEEECHHHHHHHTT
T ss_pred CCC--CCCeEEEECCCCHHHcCCceEEEecCCCceEEEEEE-EEECc-EE--e-ccccEEEcCCCCeEecCHHHHHHHHH
Confidence 862 348999999999999999999999999999999999 99999 33 2 66789999999999999999999988
Q ss_pred HhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhH
Q 010696 303 AIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEM 382 (503)
Q Consensus 303 ~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (503)
++++.
T Consensus 357 ~i~~~--------------------------------------------------------------------------- 361 (453)
T 2bju_A 357 NLDVI--------------------------------------------------------------------------- 361 (453)
T ss_dssp TSSCE---------------------------------------------------------------------------
T ss_pred HhCCc---------------------------------------------------------------------------
Confidence 77543
Q ss_pred HHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCC-ceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEE
Q 010696 383 IVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMG-KSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICIS 461 (503)
Q Consensus 383 ~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~-~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~ 461 (503)
+...| .|.++|+. ..+|+|+|+|+|.+++|+|++|+++....+...|++
T Consensus 362 -----------------------------~~~~g~~~~v~C~~-~~~P~itf~fgg~~~~l~~~~yi~~~~~~g~~~C~~ 411 (453)
T 2bju_A 362 -----------------------------KVPFLPFYVTLCNN-SKLPTFEFTSENGKYTLEPEYYLQHIEDVGPGLCML 411 (453)
T ss_dssp -----------------------------ECTTSSCEEEETTC-TTCCCEEEECSSCEEEECHHHHEEECTTTSTTEEEE
T ss_pred -----------------------------ccCCCceEEEecCC-CCCCcEEEEECCEEEEECHHHhEeecccCCCceEEE
Confidence 11245 68999997 789999999999999999999999865434568999
Q ss_pred eeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 462 GFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 462 ~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
+|...+.+ .+.||||++|||++|+|||++++|||||+++
T Consensus 412 ~~~~~~~~---~~~~ILGd~Flr~~yvVFD~~n~rIGfA~~~ 450 (453)
T 2bju_A 412 NIIGLDFP---VPTFILGDPFMRKYFTVFDYDNHSVGIALAK 450 (453)
T ss_dssp CEEECCCS---SCEEEECHHHHHHEEEEEETTTTEEEEEEEC
T ss_pred EEEeCCCC---CCCEEECHHHhhcEEEEEECCCCEEEEEEcc
Confidence 99876521 3489999999999999999999999999975
No 14
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=4.2e-62 Score=494.09 Aligned_cols=318 Identities=27% Similarity=0.486 Sum_probs=283.9
Q ss_pred CceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCccc--ccCCcccCCCCcccccc-ceeEEEee
Q 010696 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISC--YLHSRYRARLSRTYTKI-VPCKIHYG 142 (503)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C--~~~~~y~p~~SsT~~~~-~~~~~~Yg 142 (503)
....+||.|+.+..|+++|+|| ||+++|++||||+++||+|..|. ...| ..++.|||++| ||+.. +.|.+.|+
T Consensus 5 ~~~~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~C~~~~~~~y~~~~S-T~~~~~~~~~i~Yg 80 (330)
T 1yg9_A 5 VPLYKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQECV-GGACVCPNLQKYEKLKP-KYISDGNVQVKFFD 80 (330)
T ss_dssp CCSCSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECTTCC-SGGGGSTTCCCCCCSSC-EEEEEEEEEEEETT
T ss_pred eeeEeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-CccCcccccCccCCCCC-ceEECCCEEEEEEC
Confidence 3455789999999999999999 89999999999999999999996 4579 88899999999 99988 99999999
Q ss_pred ceeEEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeeccccccc-CCCCCchHHHHHHcCCCCccEEEEEe
Q 010696 143 SGQISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIA-AGNATPLWYNMVRQGHISQKIFSLWL 221 (503)
Q Consensus 143 ~gs~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s-~~~~~~~~~~l~~qg~i~~~~FSl~l 221 (503)
+|++.|.+++|+|++|+.+++++.||+++.. +..|....++||||||++..+ ....++++++|++||+| +++||+||
T Consensus 81 ~Gs~~G~~~~Dtv~ig~~~~~~~~fg~~~~~-~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i-~~~FS~~l 158 (330)
T 1yg9_A 81 TGSAVGRGIEDSLTISQLTTSQQDIVLADEL-SQEVCILSADVVVGIAAPGCPNALKGKTVLENFVEENLI-APVFSIHH 158 (330)
T ss_dssp TEEEEEEEEEEEEEETTEEEEEEEEEEEEEE-CTHHHHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSS-CSEEEEEE
T ss_pred CceEEEEEEEEEEEECCEEEcCeEEEEEEEc-ccccccccCceEEEcCcchhccccCCCCHHHHHHhcCCC-CceEEEEE
Confidence 9999999999999999999999999999987 434556678999999999887 66678899999999999 99999999
Q ss_pred cCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHH
Q 010696 222 NQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQIN 301 (503)
Q Consensus 222 ~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~ 301 (503)
++..+....|+|+|||+|+++|.|++.|+|+.+.++|.|.+++|.|+++.+. ..+..+||||||+++++|++++++|.
T Consensus 159 ~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~--~~~~~aiiDSGTs~~~lP~~~~~~l~ 236 (330)
T 1yg9_A 159 ARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGDDSWKFRLDGVKIGDTTVA--PAGTQAIIDTSKAIIVGPKAYVNPIN 236 (330)
T ss_dssp EECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCTTSCCEECSEEEETTEEEE--CTTCEEEECTTCSSEEEEHHHHHHHH
T ss_pred cCCCCCCCCCEEEECCcCHHHccCceEEEECCCCCEEEEEeCeEEECCEEEc--CCCcEEEEecCCccccCCHHHHHHHH
Confidence 8864333489999999999999999999999999999999999999998764 56789999999999999999999999
Q ss_pred HHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhh
Q 010696 302 HAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCE 381 (503)
Q Consensus 302 ~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (503)
+++++..
T Consensus 237 ~~~~~~~------------------------------------------------------------------------- 243 (330)
T 1yg9_A 237 EAIGCVV------------------------------------------------------------------------- 243 (330)
T ss_dssp HHHTCEE-------------------------------------------------------------------------
T ss_pred HHhCCcc-------------------------------------------------------------------------
Confidence 9997650
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCC--ce-EEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCccee
Q 010696 382 MIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMG--KS-FINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTI 458 (503)
Q Consensus 382 ~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~--~~-~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~ 458 (503)
...| .| .+||+.+..+|+|+|+|+|++++|+|++|+++. ...
T Consensus 244 -------------------------------~~~g~~~~~~~~C~~~~~~p~i~f~fgg~~~~l~~~~y~~~~----~~~ 288 (330)
T 1yg9_A 244 -------------------------------EKTTTRRICKLDCSKIPSLPDVTFVINGRNFNISSQYYIQQN----GNL 288 (330)
T ss_dssp -------------------------------EECSSCEEEEECGGGGGGSCCEEEEETTEEEEECHHHHEEEE----TTE
T ss_pred -------------------------------cCCCceEEEEEECCCccccCcEEEEECCEEEEECHHHhcccC----CCc
Confidence 0124 57 899998778999999999999999999999976 358
Q ss_pred EEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 459 CISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 459 C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
|+++|... +.++.||||++|||++|+|||++|+|||||+++
T Consensus 289 C~~~i~~~----~~~~~~ilG~~fl~~~y~vfD~~~~riGfA~~~ 329 (330)
T 1yg9_A 289 CYSGFQPC----GHSDHFFIGDFFVDHYYSEFNWENKTMGFGRSV 329 (330)
T ss_dssp EEESEEEE----TTCSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred EEEEEEeC----CCCCeEEecHHHhhheEEEEECCCCEEEEEECC
Confidence 99988754 234689999999999999999999999999985
No 15
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=7e-62 Score=498.63 Aligned_cols=325 Identities=26% Similarity=0.501 Sum_probs=286.6
Q ss_pred CceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeece
Q 010696 66 KADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSG 144 (503)
Q Consensus 66 ~~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~g 144 (503)
....+||.|+.+..|+++|+||||||+++|+|||||+++||+|..|.....|..++.|||++|+||+.. +.|.+.|++|
T Consensus 6 ~~~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~G 85 (361)
T 1mpp_A 6 SVDTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCVGKRFFDPSSSSTFKETDYNLNITYGTG 85 (361)
T ss_dssp CEEEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCCSSCCBCGGGCTTCEEEEEEEEEECSSC
T ss_pred ccceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCCCCCcCCCccCCceEecCCeEEEEECCc
Confidence 355689999999999999999999999999999999999999999952347999999999999999999 9999999999
Q ss_pred eEEEEEEEEEEEECCeEeeeeEEEEEEeeCC-----ccccccccceeeecccccccCCC------CCchHHHHHHcCCCC
Q 010696 145 QISGFFSQDNVKIGDMIIKDQEFVEVTKEGL-----LPFLALQFDGILGLGFRDIAAGN------ATPLWYNMVRQGHIS 213 (503)
Q Consensus 145 s~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~-----~~~~~~~~dGIlGLg~~~~s~~~------~~~~~~~l~~qg~i~ 213 (503)
++.|.+++|+|+|++.+++++.||++....+ ..+....++||||||++..+... ..+++++|++||+|.
T Consensus 86 s~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~ 165 (361)
T 1mpp_A 86 GANGIYFRDSITVGGATVKQQTLAYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLIS 165 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSS
T ss_pred eEEEEEEEEEEEECCEEEeceEEEEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCC
Confidence 9999999999999999999999999998765 34556778999999998776433 788999999999999
Q ss_pred ccEEEEEecCCCCCCCccEEEeCcccCCCcccCeeEEeccccc----ceEEEEeeEEEcCeEeeeccCCceEE-EccCcc
Q 010696 214 QKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKG----YWQIKVGDILIENSSTGFCEDGCTAI-LDSGTS 288 (503)
Q Consensus 214 ~~~FSl~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~----~w~v~l~~i~v~~~~~~~~~~~~~ai-iDTGTt 288 (503)
+++||+||++. ...|.|+|||+|+++|.|++.|+|+.+.. +|.|.+++|+|+++.+. +..+..+| |||||+
T Consensus 166 ~~~FS~~l~~~---~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~-~~~~~~ai~iDSGTt 241 (361)
T 1mpp_A 166 SPVFSVYMNTN---DGGGQVVFGGVNNTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAV-SFDGAQAFTIDTGTN 241 (361)
T ss_dssp SSEEEEECCCS---SSEEEEEESSCCGGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEE-EEEEEEEEEEETTCC
T ss_pred CcEEEEEecCC---CCCcEEEEecCChhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeec-cCCCCEEEEECCCCC
Confidence 99999999885 23899999999999999999999998765 99999999999998764 34567899 999999
Q ss_pred CcccCHHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCC
Q 010696 289 VLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNG 368 (503)
Q Consensus 289 ~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~ 368 (503)
++++|.+++++|.+++++..
T Consensus 242 ~~~lP~~~~~~l~~~~~~~~------------------------------------------------------------ 261 (361)
T 1mpp_A 242 FFIAPSSFAEKVVKAALPDA------------------------------------------------------------ 261 (361)
T ss_dssp SEEEEHHHHHHHHHHHCTTC------------------------------------------------------------
T ss_pred ceeCCHHHHHHHHHHhCCcc------------------------------------------------------------
Confidence 99999999999999997640
Q ss_pred CCCCccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCC-CeEEEEE--C-----CEEE
Q 010696 369 SSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASM-PYVSFTI--G-----NRSF 440 (503)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~-P~i~f~~--~-----g~~~ 440 (503)
+...|.|.++|+.+..+ |+|+|+| + |.++
T Consensus 262 -------------------------------------------~~~~g~~~~~C~~~~~~~p~i~f~f~~g~~~~~g~~~ 298 (361)
T 1mpp_A 262 -------------------------------------------TESQQGYTVPCSKYQDSKTTFSLVLQKSGSSSDTIDV 298 (361)
T ss_dssp -------------------------------------------EEETTEEEEEHHHHTTCCCEEEEEEECTTCSSCEEEE
T ss_pred -------------------------------------------cCCCCcEEEECCCcccCCCcEEEEEEcCCcCCCCeEE
Confidence 11246688999987788 9999999 8 8999
Q ss_pred EeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 441 PLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 441 ~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
+|+|++|+++... +...|+++|... .++.||||++|||++|+|||++++|||||+++
T Consensus 299 ~i~~~~y~~~~~~-~~~~C~~~i~~~-----~~~~~iLG~~fl~~~yvvfD~~~~~igfa~~~ 355 (361)
T 1mpp_A 299 SVPISKMLLPVDK-SGETCMFIVLPD-----GGNQFIVGNLFLRFFVNVYDFGKNRIGFAPLA 355 (361)
T ss_dssp EEEGGGGEEECSS-SSCEEEESEEEE-----SSSCCEEEHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred EECHHHhEEecCC-CCCeeEEEEEeC-----CCCCEEEChHHhccEEEEEECCCCEEEEEEcc
Confidence 9999999997543 345899888754 23589999999999999999999999999975
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=2.4e-59 Score=472.89 Aligned_cols=310 Identities=35% Similarity=0.608 Sum_probs=270.7
Q ss_pred eccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeecee-EEEEEE
Q 010696 74 NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ-ISGFFS 151 (503)
Q Consensus 74 ~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs-~~G~~~ 151 (503)
+..+..|+++|+||||||++.|++||||+++||+|..|..+ |..++.|||++|+||+.. +.|.+.|++|+ +.|.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c--~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~~G~~~ 88 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC--GSGQTKYDPNQSSTYQADGRTWSISYGDGSSASGILA 88 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC--CTTSCCBCGGGCTTCEEEEEEEEEECTTSCEEEEEEE
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH--hcCCCCCCcccCCCeeeCCCEEEEEECCCCCEEEEEE
Confidence 44688999999999999999999999999999999999833 677889999999999998 99999999998 799999
Q ss_pred EEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC-CCCCchHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010696 152 QDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA-GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 230 (503)
Q Consensus 152 ~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~-~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~ 230 (503)
+|+|++++.+++++.||++....+. |....++||||||++..+. ...++++++|++||+|.+++||+||.+.. ....
T Consensus 89 ~D~v~~g~~~v~~~~fg~~~~~~~~-f~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~-~~~~ 166 (325)
T 2apr_A 89 KDNVNLGGLLIKGQTIELAKREAAS-FASGPNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAK-NGGG 166 (325)
T ss_dssp EEEEEETTEEEEEEEEEEEEEECHH-HHTSSCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGG-GTCC
T ss_pred EEEEEECCEEECcEEEEEEeccCcc-cccCCCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCC-CCCC
Confidence 9999999999999999999887653 5555689999999988764 35778999999999999999999997642 1248
Q ss_pred cEEEeCcccCCCcccCeeEEecc-cccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCccc
Q 010696 231 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 309 (503)
Q Consensus 231 G~l~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~ 309 (503)
|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|++ .+ ...+..+||||||+++++|+++|+++.+++.+.
T Consensus 167 G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~--~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~-- 241 (325)
T 2apr_A 167 GEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-ST--VASSFDGILDTGTTLLILPNNIAASVARAYGAS-- 241 (325)
T ss_dssp EEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EE--EECCEEEEECTTCSSEEEEHHHHHHHHHHHTCE--
T ss_pred CEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-Ee--cCCCceEEEecCCccEECCHHHHHHHHHHHhcc--
Confidence 99999999999999999999997 4789999999999999 33 456789999999999999999999999998654
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHH
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 389 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (503)
+
T Consensus 242 -------------------------------------~------------------------------------------ 242 (325)
T 2apr_A 242 -------------------------------------D------------------------------------------ 242 (325)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------c------------------------------------------
Confidence 0
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010696 390 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 469 (503)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 469 (503)
+. .|.|.++|+. ..+|+|+|+|+|.+++||+++|+++.. ...|++.|+..+
T Consensus 243 ----------------------~~-~g~~~~~C~~-~~~p~i~f~f~g~~~~ip~~~~~~~~~---~~~C~~~i~~~~-- 293 (325)
T 2apr_A 243 ----------------------NG-DGTYTISCDT-SAFKPLVFSINGASFQVSPDSLVFEEF---QGQCIAGFGYGN-- 293 (325)
T ss_dssp ----------------------CS-SSCEEECSCG-GGCCCEEEEETTEEEEECGGGGEEEEE---TTEEEESEEEES--
T ss_pred ----------------------CC-CCeEEEECCC-CCCCcEEEEECCEEEEECHHHEEEcCC---CCeEEEEEEcCC--
Confidence 11 1568899985 348999999998899999999998654 458999887543
Q ss_pred CCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 470 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 470 ~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
.+.||||++|||++|+|||++|+|||||+++
T Consensus 294 ---~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 294 ---WGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp ---SSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred ---CCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 4579999999999999999999999999985
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=1.5e-59 Score=475.21 Aligned_cols=312 Identities=26% Similarity=0.432 Sum_probs=269.2
Q ss_pred eccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCccccc-c-ceeEEEeecee-EEEEE
Q 010696 74 NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTK-I-VPCKIHYGSGQ-ISGFF 150 (503)
Q Consensus 74 ~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~-~-~~~~~~Yg~gs-~~G~~ 150 (503)
.+.+..|+++|+||||||+++|++||||+++||+|..|. ...|..++.|||++|+||+. . +.|.+.|++|+ +.|.+
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~~~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~ 89 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETP-KSSATGHAIYTPSKSSTSKKVSGASWSISYGDGSSSSGDV 89 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCGGGCTTCEECTTCBEEEECTTSCEEEEEE
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCC-ccccCCCCcCCcccCcCceEcCCCeEEEEeCCCCcEEEEE
Confidence 345789999999999999999999999999999999997 34567789999999999998 4 89999999998 89999
Q ss_pred EEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC---CCCCchHHHHHHcCCCCccEEEEEecCCCCC
Q 010696 151 SQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNS 227 (503)
Q Consensus 151 ~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~ 227 (503)
++|+|+|++.+++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+.
T Consensus 90 ~~D~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~--- 164 (329)
T 3c9x_A 90 YTDKVTIGGFSVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHG--- 164 (329)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSS---
T ss_pred EEEEEEECCEEEcceEEEEEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCC---
Confidence 9999999999999999999998765323335789999999987764 3467899999986 8899999999874
Q ss_pred CCccEEEeCcccCCCcccCeeEEecc-cccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCC
Q 010696 228 EVGGEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGA 306 (503)
Q Consensus 228 ~~~G~l~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~ 306 (503)
..|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|+++.+ +..+..+||||||+++++|++++++|.+++.+
T Consensus 165 -~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~ 241 (329)
T 3c9x_A 165 -QNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKL--NRNSIDGIADTGTTLLLLDDNVVDAYYANVQS 241 (329)
T ss_dssp -SCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCC--CSCCEEEEECTTCCSEEECHHHHHHHHTTCTT
T ss_pred -CCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEec--cCCCceEEEECCCCcEeCCHHHHHHHHHhCCC
Confidence 2899999999999999999999997 5789999999999999865 35678999999999999999999999888743
Q ss_pred ccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHH
Q 010696 307 EGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFW 386 (503)
Q Consensus 307 ~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (503)
.. +
T Consensus 242 a~--------------------------------------~--------------------------------------- 244 (329)
T 3c9x_A 242 AQ--------------------------------------Y--------------------------------------- 244 (329)
T ss_dssp CE--------------------------------------E---------------------------------------
T ss_pred cE--------------------------------------E---------------------------------------
Confidence 30 0
Q ss_pred HHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEec
Q 010696 387 IQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIAL 466 (503)
Q Consensus 387 ~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~ 466 (503)
+...+.|.++|+ ..+|+|+|+|+|.+++||+++|++...+.+...|+++|+..
T Consensus 245 -------------------------~~~~~~~~~~C~--~~~P~i~f~f~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~ 297 (329)
T 3c9x_A 245 -------------------------DNQQEGVVFDCD--EDLPSFSFGVGSSTITIPGDLLNLTPLEEGSSTCFGGLQSS 297 (329)
T ss_dssp -------------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECGGGGEEEESSTTCSEEEESEEEC
T ss_pred -------------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeccCCCCCeEEEEEEcC
Confidence 112467889999 47999999999999999999999875433346899988754
Q ss_pred cCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEec
Q 010696 467 DVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEA 502 (503)
Q Consensus 467 ~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~ 502 (503)
+ ..+.||||++|||++|+|||++|+|||||+.
T Consensus 298 ~----~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 298 S----GIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp T----TTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred C----CCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 2 3468999999999999999999999999984
No 18
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=2.2e-59 Score=473.94 Aligned_cols=309 Identities=25% Similarity=0.418 Sum_probs=266.6
Q ss_pred cCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc--ceeEEEeecee-EEEEEEE
Q 010696 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI--VPCKIHYGSGQ-ISGFFSQ 152 (503)
Q Consensus 76 ~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~--~~~~~~Yg~gs-~~G~~~~ 152 (503)
.+..|+++|+||||||+++|++||||+++||+|..|. ...| .++.|||++|+||+.. +.|.+.|++|+ +.|.+++
T Consensus 13 ~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~-~~~~-~~~~y~~~~SsT~~~~~~~~~~i~Yg~Gs~~~G~~~~ 90 (329)
T 1oew_A 13 LDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETT-ASEV-XQTIYTPSKSTTAKLLSGATWSISYGDGSSSSGDVYT 90 (329)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSC-GGGC--CCCBCGGGCTTCEEEEEEEEEEECTTSCEEEEEEEE
T ss_pred CCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCC-cccc-ccCccCCccCccceecCCCeEEEEeCCCCcEEEEEEE
Confidence 5789999999999999999999999999999999997 3456 7889999999999994 89999999998 8999999
Q ss_pred EEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC---CCCCchHHHHHHcCCCCccEEEEEecCCCCCCC
Q 010696 153 DNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEV 229 (503)
Q Consensus 153 D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~ 229 (503)
|+|++++.+++++.||+++...+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. .
T Consensus 91 D~v~~g~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~ 164 (329)
T 1oew_A 91 DTVSVGGLTVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYH----A 164 (329)
T ss_dssp EEEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSS----S
T ss_pred EEEEECCEEEeeeEEEEEEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCC----C
Confidence 99999999999999999998765333335779999999987764 3467899999987 8899999999874 2
Q ss_pred ccEEEeCcccCCCcccCeeEEecc-cccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCcc
Q 010696 230 GGEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEG 308 (503)
Q Consensus 230 ~G~l~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~ 308 (503)
.|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|+++.+. ..+..+||||||+++++|++++++|.+++.+..
T Consensus 165 ~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~--~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~a~ 242 (329)
T 1oew_A 165 PGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFK--STSIDGIADTGTTLLYLPATVVSAYWAQVSGAK 242 (329)
T ss_dssp CEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCE--EEEEEEEECTTCCSEEECHHHHHHHHTTSTTCE
T ss_pred CeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeecc--CCCceEEEeCCCCCEECCHHHHHHHHHhCCCcE
Confidence 899999999999999999999997 57899999999999998653 456789999999999999999999998874330
Q ss_pred ccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHH
Q 010696 309 IVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQ 388 (503)
Q Consensus 309 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 388 (503)
+
T Consensus 243 --------------------------------------~----------------------------------------- 243 (329)
T 1oew_A 243 --------------------------------------S----------------------------------------- 243 (329)
T ss_dssp --------------------------------------E-----------------------------------------
T ss_pred --------------------------------------E-----------------------------------------
Confidence 0
Q ss_pred HHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccC
Q 010696 389 MQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDV 468 (503)
Q Consensus 389 ~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~ 468 (503)
+...|.|.++|+ ..+|+|+|+|+|.+++||+++|++...+.+...|+++|+..+
T Consensus 244 -----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~- 297 (329)
T 1oew_A 244 -----------------------SSSVGGYVFPCS--ATLPSFTFGVGSARIVIPGDYIDFGPISTGSSSCFGGIQSSA- 297 (329)
T ss_dssp -----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEEST-
T ss_pred -----------------------cCCCCEEEEECC--CCCCcEEEEECCEEEEECHHHeeeeecCCCCCeEEEEEEeCC-
Confidence 112467889999 479999999999999999999998754333468999887542
Q ss_pred CCCCCCeEEeCHhhhcceEEEEeC-CCCeEEEEec
Q 010696 469 PPPQGPLWVLGDMFLRAYHTVFDF-GNLQIGFAEA 502 (503)
Q Consensus 469 ~~~~~~~~ILG~~Fl~~~y~vfD~-~~~riGfa~~ 502 (503)
..+.||||++|||++|+|||+ +|+|||||++
T Consensus 298 ---~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 298 ---GIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ---TTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ---CCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 346899999999999999999 9999999984
No 19
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=2.5e-58 Score=468.29 Aligned_cols=312 Identities=28% Similarity=0.476 Sum_probs=272.4
Q ss_pred eeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC--CCCCcccccCCcccCCCCcccccc-ceeEEEeece
Q 010696 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--CLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSG 144 (503)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~--C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~g 144 (503)
..+||.+. +..|+++|+||||||+++|++||||+++||++.. |.....|..++.|||++|+||+.. +.|.+.|++|
T Consensus 3 i~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~g 81 (339)
T 3fv3_A 3 ISLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCKSSGTFTPSSSSSYKNLGAAFTIRYGDG 81 (339)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTTTTCCBCGGGCTTCEEEEEEEEEECTTS
T ss_pred eeeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCCCCCcCCCccCcceeeCCceEEEEECCC
Confidence 46788875 6799999999999999999999999999999764 654447998999999999999999 9999999999
Q ss_pred -eEEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC----------CCCCchHHHHHHcCCCC
Q 010696 145 -QISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA----------GNATPLWYNMVRQGHIS 213 (503)
Q Consensus 145 -s~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~----------~~~~~~~~~l~~qg~i~ 213 (503)
.+.|.+++|+|+|++.+++++.||+++.... .+||||||++..+. ....+++++|++||+|+
T Consensus 82 s~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~ 154 (339)
T 3fv3_A 82 STSQGTWGKDTVTINGVSITGQQIADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIR 154 (339)
T ss_dssp CEEEEEEEEEEEEETTEEEEEEEEEEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCS
T ss_pred ceEEEEEEEEEEEECCEEECceEEEEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCC
Confidence 5899999999999999999999999988654 49999999987653 23566999999999999
Q ss_pred ccEEEEEecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccC
Q 010696 214 QKIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGP 293 (503)
Q Consensus 214 ~~~FSl~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP 293 (503)
+++||+||++.. ...|+|+|||+|+++|.|+++|+|+..+.+|.|.+++|.++++.+.. +..++|||||+++++|
T Consensus 155 ~~~fsl~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~---~~~~iiDSGtt~~~lP 229 (339)
T 3fv3_A 155 TNAYSLYLNSPS--AETGTIIFGGVDNAKYSGKLVAEQVTSSQALTISLASVNLKGSSFSF---GDGALLDSGTTLTYFP 229 (339)
T ss_dssp SSEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEEBCCSSSCEEEEEEEEESSCEEEE---EEEEEECTTBSSEEEC
T ss_pred CceEEEEECCCC--CCCeEEEEeeechHHeecceEEEecccCccEEEEEEEEEECCEeecC---CccEEEeCCCCCEecC
Confidence 999999998753 24899999999999999999999999989999999999999998753 3679999999999999
Q ss_pred HHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCc
Q 010696 294 TTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINE 373 (503)
Q Consensus 294 ~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (503)
++++++|.+++++.. +
T Consensus 230 ~~~~~~i~~~~~~~~---------------------------------------~------------------------- 245 (339)
T 3fv3_A 230 SDFAAQLADKAGARL---------------------------------------V------------------------- 245 (339)
T ss_dssp HHHHHHHHHHHTCEE---------------------------------------E-------------------------
T ss_pred HHHHHHHHHHcCCEE---------------------------------------c-------------------------
Confidence 999999999997650 0
Q ss_pred cccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEEC-CEEEEeCcccceEeec
Q 010696 374 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIG-NRSFPLSPEQYIFKIE 452 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~-g~~~~l~p~~yi~~~~ 452 (503)
..+...+.|.+||+. ..+|+|+|+|+ |.+++|++++|+++..
T Consensus 246 ------------------------------------~~~~~~~~~~~~C~~-~~~p~i~f~f~~g~~~~v~~~~~~~~~~ 288 (339)
T 3fv3_A 246 ------------------------------------QVARDQYLYFIDCNT-DTSGTTVFNFGNGAKITVPNTEYVYQNG 288 (339)
T ss_dssp ------------------------------------EEETTEEEEEECTTC-CCCSEEEEEETTSCEEEEEGGGGEEECS
T ss_pred ------------------------------------cccccCceEEEecCC-CCCCcEEEEECCCCEEEECHHHheeeCC
Confidence 000124668899996 57899999994 8999999999998753
Q ss_pred cCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 453 EGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 453 ~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
+ ..|+++|.. .+.||||++|||++|+|||++++|||||+++
T Consensus 289 ~---~~C~~~i~~-------~~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 329 (339)
T 3fv3_A 289 D---GTCLWGIQP-------SDDTILGDNFLRHAYLLYNLDANTISIAQVK 329 (339)
T ss_dssp S---SCEEESEEE-------CSSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred C---CeEEEEEEe-------CCcEEeChHHHhCEEEEEECCCCEEEEEecC
Confidence 2 479998875 2469999999999999999999999999985
No 20
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=5.3e-58 Score=466.44 Aligned_cols=314 Identities=28% Similarity=0.459 Sum_probs=270.5
Q ss_pred ceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCC--CCCC------CcccccCCcccCCCCcccccc-cee
Q 010696 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS--KCLF------SISCYLHSRYRARLSRTYTKI-VPC 137 (503)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~--~C~~------~~~C~~~~~y~p~~SsT~~~~-~~~ 137 (503)
...+||.| .+..|+++|+||||||+++|++||||+++||++. .|.. ...|..++.|||++|+||+.. +.|
T Consensus 2 ~v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~ 80 (342)
T 2qzx_A 2 PVAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNLNTRF 80 (342)
T ss_dssp CEEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEEEEEE
T ss_pred ceeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccCCCcE
Confidence 34678888 5889999999999999999999999999999976 6752 246888999999999999998 999
Q ss_pred EEEeecee-EEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCC--CCCchHHHHHHcCCCCc
Q 010696 138 KIHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQ 214 (503)
Q Consensus 138 ~~~Yg~gs-~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~l~~qg~i~~ 214 (503)
.+.|++|+ +.|.+++|+|++++.+++++.||++.... ..+||||||++..+.. ...+++++|++||+|++
T Consensus 81 ~i~Yg~Gs~~~G~~~~D~v~~g~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~ 153 (342)
T 2qzx_A 81 DIKYGDGSYAKGKLYKDTVGIGGVSVRDQLFANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGK 153 (342)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSS
T ss_pred EEEeCCCCeEEEEEEEEEEEECCEEecceEEEEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCc
Confidence 99999998 68999999999999999999999998753 4589999999876542 35679999999999999
Q ss_pred cEEEEEecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCH
Q 010696 215 KIFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 294 (503)
Q Consensus 215 ~~FSl~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~ 294 (503)
++||+||++.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+. .+..++|||||+++++|+
T Consensus 154 ~~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~aiiDSGTt~~~lP~ 228 (342)
T 2qzx_A 154 AAYSLYLNSAE--ASTGQIIFGGIDKAKYSGSLVDLPITSEKKLTVGLRSVNVRGRNVD---ANTNVLLDSGTTISYFTR 228 (342)
T ss_dssp SEEEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECH
T ss_pred cEEEEEeCCCC--CCCeEEEECccchhhEecceEEEeccCCceEEEEEeEEEECCEecC---CCcCEEEeCCCCCEEcCH
Confidence 99999998752 3489999999999999999999999998899999999999998875 346799999999999999
Q ss_pred HHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcc
Q 010696 295 TVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINES 374 (503)
Q Consensus 295 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
+++++|.+++++... ++
T Consensus 229 ~~~~~l~~~~~~~~~-------------------------------------~~-------------------------- 245 (342)
T 2qzx_A 229 SIVRNILYAIGAQMK-------------------------------------FD-------------------------- 245 (342)
T ss_dssp HHHHHHHHHHTCEEE-------------------------------------EC--------------------------
T ss_pred HHHHHHHHHhCCeee-------------------------------------ec--------------------------
Confidence 999999999976510 00
Q ss_pred ccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEE-CCEEEEeCcccceEeec-
Q 010696 375 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTI-GNRSFPLSPEQYIFKIE- 452 (503)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~-~g~~~~l~p~~yi~~~~- 452 (503)
+...+.|.++|+. +|.|+|+| +|.+++|++++|+++..
T Consensus 246 -------------------------------------~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~~~~~~~~ 285 (342)
T 2qzx_A 246 -------------------------------------SAGNKVYVADCKT---SGTIDFQFGNNLKISVPVSEFLFQTYY 285 (342)
T ss_dssp -------------------------------------TTSCEEEEECTTC---CCEEEEEETTTEEEEEEGGGGEECCBC
T ss_pred -------------------------------------cCCCcEEEEECCC---CCcEEEEECCCcEEEEcHHHhcccccc
Confidence 0112368899984 89999999 68999999999998753
Q ss_pred --cCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 453 --EGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 453 --~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
......|++++... +.||||++|||++|+|||++++|||||+++
T Consensus 286 ~~~~~~~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 2qzx_A 286 TSGKPFPKCEVRIRES-------EDNILGDNFLRSAYVVYNLDDKKISMAPVK 331 (342)
T ss_dssp TTSCBCSSEEESEEEC-------SSCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred cCCCCCCccEEEEecC-------CCcEeChHhhhcEEEEEECCCCEEEEEeeC
Confidence 12345799988743 259999999999999999999999999975
No 21
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=6.7e-58 Score=462.36 Aligned_cols=308 Identities=25% Similarity=0.401 Sum_probs=266.5
Q ss_pred cCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeecee-EEEEEEEE
Q 010696 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ-ISGFFSQD 153 (503)
Q Consensus 76 ~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs-~~G~~~~D 153 (503)
.+..|+++|+|| ||+++|++||||+++||+|..|. ...|..++.|||++|+ ++.. +.|.+.|++|+ +.|.+++|
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 87 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELP-SSEQTGHDLYTPSSSA-TKLSGYSWDISYGDGSSASGDVYRD 87 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSC-HHHHTTSCCCBCCSSC-EECTTCBEEEECSSSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCC-ccccCCCCCCCchhcC-CccCCCEEEEEeCCCCEEEEEEEEe
Confidence 578999999999 89999999999999999999997 4457788999999999 6655 99999999998 89999999
Q ss_pred EEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC---CCCCchHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010696 154 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 230 (503)
Q Consensus 154 ~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~ 230 (503)
+|++++.+++++.||++....+..+....++||||||++..+. ...++++++|+++ |.+++||+||.+. ..
T Consensus 88 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~l~~~----~~ 161 (325)
T 1ibq_A 88 TVTVGGVTTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ--LDSPLFAVQLKHD----AP 161 (325)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEEEETT----EE
T ss_pred EEEECCEEEcceEEEEEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh--cCCcEEEEEecCC----CC
Confidence 9999999999999999998765333335789999999987764 3577899999987 8899999999874 38
Q ss_pred cEEEeCcccCCCcccCeeEEecc-cccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCccc
Q 010696 231 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 309 (503)
Q Consensus 231 G~l~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~ 309 (503)
|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|+++.+ +..+..+||||||+++++|++++++|.+++.+..
T Consensus 162 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~--~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~a~- 238 (325)
T 1ibq_A 162 GVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSS--SSSGFSAIADTGTTLILLDDEIVSAYYEQVSGAQ- 238 (325)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCC--BSCCEEEEECTTCCSEEECHHHHHHHHTTSTTCB-
T ss_pred ceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeec--cCCCceEEEeCCCCcEeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999997 5789999999999999865 3567899999999999999999999998884320
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHH
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 389 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (503)
T Consensus 239 -------------------------------------------------------------------------------- 238 (325)
T 1ibq_A 239 -------------------------------------------------------------------------------- 238 (325)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010696 390 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 469 (503)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 469 (503)
.+...|.|.++|+ ..+|+|+|+|+|++++||+++|++...+.+...|+++|+..+
T Consensus 239 ---------------------~~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~-- 293 (325)
T 1ibq_A 239 ---------------------ESYEAGGYVFSCS--TDLPDFTVVIGDYKAVVPGKYINYAPVSTGSSTCYGGIQSNS-- 293 (325)
T ss_dssp ---------------------CCSSSSSCEEETT--CCCCCEEEEETTEEEEECHHHHEEEESSTTCSEEEESEEECT--
T ss_pred ---------------------EcCcCCeEEEEcC--CCCCcEEEEECCEEEEECHHHhcccccCCCCCeEEEEEEcCC--
Confidence 0122466889999 479999999999999999999998754323468999887542
Q ss_pred CCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 470 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 470 ~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
..+.||||++|||++|+|||++|+|||||+++
T Consensus 294 --~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 325 (325)
T 1ibq_A 294 --GLGLSILGDVFLKSQYVVFNSEGPKLGFAAQA 325 (325)
T ss_dssp --TTCSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCceEEChHHhcCEEEEEECCCCEEEeeeCC
Confidence 34689999999999999999999999999986
No 22
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=6.6e-58 Score=464.19 Aligned_cols=308 Identities=28% Similarity=0.434 Sum_probs=269.2
Q ss_pred eeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCC--CCCC------CcccccCCcccCCCCcccccc-ceeE
Q 010696 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS--KCLF------SISCYLHSRYRARLSRTYTKI-VPCK 138 (503)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~--~C~~------~~~C~~~~~y~p~~SsT~~~~-~~~~ 138 (503)
..+||.|. +..|+++|+||||||+++|++||||+++||++. .|.. ...|..++.|||++|+||+.. +.|.
T Consensus 3 ~~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (334)
T 1j71_A 3 VPTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNLNQDFS 81 (334)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEEEEEEE
T ss_pred eeEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccCCCceE
Confidence 46788886 889999999999999999999999999999976 6752 236988999999999999998 9999
Q ss_pred EEeecee-EEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC--CCCCchHHHHHHcCCCCcc
Q 010696 139 IHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--GNATPLWYNMVRQGHISQK 215 (503)
Q Consensus 139 ~~Yg~gs-~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~l~~qg~i~~~ 215 (503)
+.|++|+ +.|.+++|+|++++..++++.||++.... ..+||||||++..+. ....+++++|++||+|+++
T Consensus 82 i~Yg~Gs~~~G~~~~D~v~~g~~~~~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~ 154 (334)
T 1j71_A 82 IEYGDLTSSQGSFYKDTVGFGGISIKNQQFADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKN 154 (334)
T ss_dssp EEBTTSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSS
T ss_pred EEECCCCEEEEEEEEEEEEECCEEEccEEEEEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCcc
Confidence 9999997 68999999999999999999999998753 458999999987654 2456789999999999999
Q ss_pred EEEEEecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHH
Q 010696 216 IFSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 295 (503)
Q Consensus 216 ~FSl~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~ 295 (503)
+||+||++.. ...|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+. .+..++|||||+++++|++
T Consensus 155 ~Fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~---~~~~~iiDSGTt~~~lP~~ 229 (334)
T 1j71_A 155 AYSLYLNSED--ASTGKIIFGGVDNAKYTGTLTALPVTSSVELRVHLGSINFDGTSVS---TNADVVLDSGTTITYFSQS 229 (334)
T ss_dssp EEEEECCCTT--CSEEEEEETEEETTSEEEEEEEEECCCSSSCEEEEEEEEETTEEEE---EEEEEEECTTCSSEEECHH
T ss_pred EEEEEeCCCC--CCCeEEEEeeechHHccCceEEEEccCCCeEEEEEeEEEECCEecc---CCccEEEeCCCCcEecCHH
Confidence 9999998752 3489999999999999999999999998999999999999998875 3467999999999999999
Q ss_pred HHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccc
Q 010696 296 VVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINEST 375 (503)
Q Consensus 296 ~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (503)
++++|.+++++..
T Consensus 230 ~~~~l~~~~~~~~------------------------------------------------------------------- 242 (334)
T 1j71_A 230 TADKFARIVGATW------------------------------------------------------------------- 242 (334)
T ss_dssp HHHHHHHHHTCEE-------------------------------------------------------------------
T ss_pred HHHHHHHHcCCcc-------------------------------------------------------------------
Confidence 9999999997650
Q ss_pred cchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceE-EeCCCCCCCCeEEEEE-CCEEEEeCcccceEeecc
Q 010696 376 LCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSF-INCDDIASMPYVSFTI-GNRSFPLSPEQYIFKIEE 453 (503)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~-~~C~~~~~~P~i~f~~-~g~~~~l~p~~yi~~~~~ 453 (503)
+...+.|. ++|+. +|.|+|+| +|.+++|++++|+++..+
T Consensus 243 ------------------------------------~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~i~~~~y~~~~~~ 283 (334)
T 1j71_A 243 ------------------------------------DSRNEIYRLPSCDL---SGDAVFNFDQGVKITVPLSELILKDSD 283 (334)
T ss_dssp ------------------------------------ETTTTEEECSSSCC---CSEEEEEESTTCEEEEEGGGGEEECSS
T ss_pred ------------------------------------cCCCceEEEEcCCC---CCceEEEEcCCcEEEECHHHheeecCC
Confidence 01124577 89984 89999999 789999999999998543
Q ss_pred CcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 454 GHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 454 ~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
+ ..|++++... +.||||++|||++|+|||++++|||||+++
T Consensus 284 ~--~~C~~~i~~~-------~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (334)
T 1j71_A 284 S--SICYFGISRN-------DANILGDNFLRRAYIVYDLDDKTISLAQVK 324 (334)
T ss_dssp S--SCEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred C--CeeEEEEeEC-------CCcEEChHhhccEEEEEECCCCEEEEEecC
Confidence 2 3599988743 359999999999999999999999999975
No 23
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=7.2e-58 Score=461.65 Aligned_cols=305 Identities=27% Similarity=0.399 Sum_probs=265.1
Q ss_pred cCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeecee-EEEEEEEE
Q 010696 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ-ISGFFSQD 153 (503)
Q Consensus 76 ~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs-~~G~~~~D 153 (503)
.+..|+++|+|| ||+++|++||||+++||+|..|. ...|..++.|||++|+ ++.. +.|.+.|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTP-SSERSGHDYYTPGSSA-QKIDGATWSISYGDGSSASGDVYKD 88 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTCCCBCCCTTC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCC-cccccCCCCCCccccC-CccCCCeEEEEcCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999997 4467788999999999 7655 99999999998 89999999
Q ss_pred EEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC---CCCCchHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010696 154 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 230 (503)
Q Consensus 154 ~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~ 230 (503)
+|++++.+++++.||+++...+..+....++||||||++..+. ...++++++|++| +.+++||+||.+. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1izd_A 89 KVTVGGVSYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS--LSEPIFAVALKHN----AP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG--SSSSEEEEECCTT----SC
T ss_pred EEEECCEEECceEEEEEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh--ccCcEEEEEccCC----CC
Confidence 9999999999999999998765333335779999999988765 3577899999987 8899999999874 28
Q ss_pred cEEEeCcccCCCcccCeeEEecc-cccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCccc
Q 010696 231 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 309 (503)
Q Consensus 231 G~l~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~ 309 (503)
|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|++ .+ +..+..+|+||||+++++|++++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~--~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~ga~- 238 (323)
T 1izd_A 163 GVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DS--SSDSITGIADTGTTLLLLDDSIVDAYYEQVNGAS- 238 (323)
T ss_dssp EEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EE--ECCCEEEEECTTCCSEEECHHHHHHHHTTSTTCE-
T ss_pred CEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cc--cCCCceEEEeCCCcceeCCHHHHHHHHHhCCCcE-
Confidence 99999999999999999999997 6789999999999999 54 4677899999999999999999999998874320
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHH
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 389 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (503)
+
T Consensus 239 -------------------------------------~------------------------------------------ 239 (323)
T 1izd_A 239 -------------------------------------Y------------------------------------------ 239 (323)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010696 390 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 469 (503)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 469 (503)
+...|.|.+||+ ..+|+|+|+|+|++++|++++|+++.. ....|+++|+..+
T Consensus 240 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~i~~~~~~~~~~--~~~~C~~~i~~~~-- 291 (323)
T 1izd_A 240 ----------------------DSSQGGYVFPSS--ASLPDFSVTIGDYTATVPGEYISFADV--GNGQTFGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEEETT--CCCCCEEEEETTEEEEECHHHHEEEEC--STTEEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEecCHHHeEEecC--CCCeEEEEEEcCC--
Confidence 112467899999 479999999999999999999998753 2468999887542
Q ss_pred CCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 470 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 470 ~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
..+.||||++|||++|+|||++|+|||||++|
T Consensus 292 --~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1izd_A 292 --GIGFSIFGDVFLKSQYVVFDASGPRLGFAAQA 323 (323)
T ss_dssp --TTSSEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCCcEEEChHHhcCEEEEEECCCCEEEEeeCC
Confidence 34689999999999999999999999999986
No 24
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=1.4e-57 Score=463.28 Aligned_cols=314 Identities=29% Similarity=0.457 Sum_probs=268.3
Q ss_pred eeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC--CC------CCcccccCCcccCCCCcccccc-ceeE
Q 010696 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--CL------FSISCYLHSRYRARLSRTYTKI-VPCK 138 (503)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~--C~------~~~~C~~~~~y~p~~SsT~~~~-~~~~ 138 (503)
..+||.+. +..|+++|+||||||+++|++||||+++||+++. |. ....|..++.|+|++|+||+.. +.|.
T Consensus 3 v~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~~~~~~ 81 (342)
T 3pvk_A 3 VPVTLHNE-QVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQTADFCKQKGTYDPSGSSASQDLNTPFK 81 (342)
T ss_dssp EEEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGTTCCBCGGGCTTCEEEEEEEE
T ss_pred cceEEecC-CcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccccCCCCCCCcCCCccCcceeecCCeEE
Confidence 45778774 7899999999999999999999999999999765 73 2357988999999999999998 9999
Q ss_pred EEeecee-EEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCC-CCCchHHHHHHcCCCCccE
Q 010696 139 IHYGSGQ-ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG-NATPLWYNMVRQGHISQKI 216 (503)
Q Consensus 139 ~~Yg~gs-~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~-~~~~~~~~l~~qg~i~~~~ 216 (503)
+.|++|+ +.|.+++|+|+|++.+++++.||+++... ..+||||||++..+.. ...+++++|++||+|.+++
T Consensus 82 i~Yg~gs~~~G~~~~D~v~ig~~~v~~~~fg~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~ 154 (342)
T 3pvk_A 82 IGYGDGSSSQGTLYKDTVGFGGVSIKNQVLADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNA 154 (342)
T ss_dssp EECSSSCEEEEEEEEEEEEETTEEEEEEEEEEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSE
T ss_pred EEecCCCeEEEEEEEEEEEECCEEecceEEEEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCce
Confidence 9999998 89999999999999999999999998754 4599999999876543 3567999999999999999
Q ss_pred EEEEecCCCCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHH
Q 010696 217 FSLWLNQDPNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 296 (503)
Q Consensus 217 FSl~l~~~~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~ 296 (503)
||+||++.. ...|+|+|||+|+++|.|++.|+|+....+|.|.+++|.++++.+.. .+..++|||||+++++|+++
T Consensus 155 fs~~l~~~~--~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~--~~~~~iiDSGtt~~~lP~~~ 230 (342)
T 3pvk_A 155 YSLYLNSPD--AATGQIIFGGVDNAKYSGSLIALPVTSDRELRISLGSVEVSGKTINT--DNVDVLLDSGTTITYLQQDL 230 (342)
T ss_dssp EEEECCCTT--CSEEEEEETEEETTSBSSCCEEEECCCSSSCEEEEEEEEETTEEEEE--EEEEEEECTTCSSEEECHHH
T ss_pred EEEEeCCCC--CCCcEEEECccCccceeeeeEEeecCccceEEEEEeEEEECCEEecC--CCceEEEeCCCCCeecCHHH
Confidence 999998753 23899999999999999999999999988999999999999998753 34789999999999999999
Q ss_pred HHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccc
Q 010696 297 VAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTL 376 (503)
Q Consensus 297 ~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
+++|.+++++...
T Consensus 231 ~~~i~~~~~~~~~------------------------------------------------------------------- 243 (342)
T 3pvk_A 231 ADQIIKAFNGKLT------------------------------------------------------------------- 243 (342)
T ss_dssp HHHHHHHTTCEEE-------------------------------------------------------------------
T ss_pred HHHHHHHcCCeec-------------------------------------------------------------------
Confidence 9999999976510
Q ss_pred chhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEEC-CEEEEeCcccceEeeccC-
Q 010696 377 CAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIG-NRSFPLSPEQYIFKIEEG- 454 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~-g~~~~l~p~~yi~~~~~~- 454 (503)
......+.|.++|+. .|+|+|+|+ |.+++||+++|+++....
T Consensus 244 ---------------------------------~~~~~~~~~~~~C~~---~p~i~f~f~~g~~~~vp~~~~~~~~~~~~ 287 (342)
T 3pvk_A 244 ---------------------------------QDSNGNSFYEVDCNL---SGDVVFNFSKNAKISVPASEFAASLQGDD 287 (342)
T ss_dssp ---------------------------------ECTTSCEEEEECSCC---CSEEEEEESTTCEEEEEGGGGEEC-----
T ss_pred ---------------------------------ccCCCceEEEEecCC---CCceEEEECCCCEEEEcHHHheeeccccC
Confidence 000112358999994 599999997 899999999999874321
Q ss_pred --cceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 455 --HSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 455 --~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
....|++++... +.||||++|||++|+|||++++|||||+++
T Consensus 288 g~~~~~C~~~i~~~-------~~~ilG~~fl~~~y~vfD~~~~~igfA~~~ 331 (342)
T 3pvk_A 288 GQPYDKCQLLFDVN-------DANILGDNFLRSAYIVYDLDDNEISLAQVK 331 (342)
T ss_dssp -----CEEESEEEC-------TTCEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred CCcCCeeEEEEeeC-------CCeEeCHHHHhcEEEEEECCCCEEEEEecC
Confidence 136799988742 478999999999999999999999999985
No 25
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=5e-58 Score=462.91 Aligned_cols=305 Identities=25% Similarity=0.410 Sum_probs=263.7
Q ss_pred cCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeecee-EEEEEEEE
Q 010696 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ-ISGFFSQD 153 (503)
Q Consensus 76 ~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs-~~G~~~~D 153 (503)
.+..|+++|+|| ||+++|++||||+++||+|..|. ...|..++.|||++|+ ++.. +.|.+.|++|+ +.|.+++|
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~-~~~c~~~~~y~~~~Ss-~~~~~~~~~i~Yg~Gs~~~G~~~~D 88 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELP-ASQQSGHSVYNPSATG-KELSGYTWSISYGDGSSASGNVFTD 88 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSC-HHHHTTSCCBCHHHHC-EEEEEEEEEEECTTSCEEEEEEEEE
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCC-chhccCCCCCCcccCC-cccCCCeEEEEeCCCCeEEEEEEEE
Confidence 578999999999 89999999999999999999997 4467788999999999 7655 99999999998 89999999
Q ss_pred EEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC---CCCCchHHHHHHcCCCCccEEEEEecCCCCCCCc
Q 010696 154 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA---GNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVG 230 (503)
Q Consensus 154 ~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~---~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~ 230 (503)
+|++++.+++++.||+++..++..+....++||||||++..+. ...++++++|+++ |.+++||+||++. ..
T Consensus 89 ~v~ig~~~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~----~~ 162 (323)
T 1bxo_A 89 SVTVGGVTAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQTTFFDTVKSS--LAQPLFAVALKHQ----QP 162 (323)
T ss_dssp EEEETTEEEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCCCCHHHHHGGG--BSSSEEEEECCSS----SC
T ss_pred EEEECCEEECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCCCCHHHHHHHh--cCCcEEEEEEeCC----CC
Confidence 9999999999999999998765333335779999999987765 2467899999987 8999999999874 28
Q ss_pred cEEEeCcccCCCcccCeeEEecc-cccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCccc
Q 010696 231 GEIIFGGFDWRHFRGSHIYVPIT-EKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGI 309 (503)
Q Consensus 231 G~l~fGgiD~~~~~g~l~~~p~~-~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~ 309 (503)
|+|+|||+|+++|.|++.|+|+. +.++|.|.+++|+|++ + +..+..+||||||+++++|++++++|.+++.+..
T Consensus 163 G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~--~~~~~~aiiDSGTs~~~lP~~~~~~l~~~i~~a~- 237 (323)
T 1bxo_A 163 GVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--Q--SGDGFSGIADTGTTLLLLDDSVVSQYYSQVSGAQ- 237 (323)
T ss_dssp EEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--E--EEEEEEEEECTTCSSEEECHHHHHHHHTTSTTCE-
T ss_pred ceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--c--cCCCceEEEeCCCCceeCCHHHHHHHHHhCCCce-
Confidence 99999999999999999999996 6789999999999999 2 3456789999999999999999999998884330
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHH
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQM 389 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 389 (503)
+
T Consensus 238 -------------------------------------~------------------------------------------ 238 (323)
T 1bxo_A 238 -------------------------------------Q------------------------------------------ 238 (323)
T ss_dssp -------------------------------------E------------------------------------------
T ss_pred -------------------------------------E------------------------------------------
Confidence 0
Q ss_pred HHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCC
Q 010696 390 QLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVP 469 (503)
Q Consensus 390 ~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~ 469 (503)
+...|.|.++|+ ..+|+|+|+|+|.+++||+++|+++..+ +...|+++|+..+
T Consensus 239 ----------------------~~~~g~~~~~C~--~~~P~i~f~fgg~~~~l~~~~~~~~~~~-~~~~C~~~i~~~~-- 291 (323)
T 1bxo_A 239 ----------------------DSNAGGYVFDCS--TNLPDFSVSISGYTATVPGSLINYGPSG-DGSTCLGGIQSNS-- 291 (323)
T ss_dssp ----------------------ETTTTEEEECTT--CCCCCEEEEETTEEEEECHHHHEEEECS-SSSCEEESEEECT--
T ss_pred ----------------------cCcCCEEEEECC--CCCceEEEEECCEEEEECHHHeEEeccC-CCCeEEEEEECCC--
Confidence 112467899999 4799999999999999999999987532 3368999887542
Q ss_pred CCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 470 PPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 470 ~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
..+.||||++|||++|+|||++|+|||||++|
T Consensus 292 --~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~a 323 (323)
T 1bxo_A 292 --GIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQA 323 (323)
T ss_dssp --TCSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred --CCCcEEEChHHHcCEEEEEECCCCEEEEecCC
Confidence 34689999999999999999999999999986
No 26
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=3.2e-57 Score=460.34 Aligned_cols=313 Identities=28% Similarity=0.442 Sum_probs=266.6
Q ss_pred ceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCccccccceeEEEeeceeE
Q 010696 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIVPCKIHYGSGQI 146 (503)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~Yg~gs~ 146 (503)
...+||.|+ +..|+++|+||||||+++|+|||||+++||+|. +.|+|++|+++.. +.|.+.|++|++
T Consensus 2 ~~~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~-----------~~y~~s~Ss~~~~-~~~~i~Yg~Gs~ 68 (340)
T 1wkr_A 2 AGSVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGAD-----------KSYVKTSTSSATS-DKVSVTYGSGSF 68 (340)
T ss_dssp CEEEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECSS-----------SCCCCCTTCEEEE-EEEEEECSSCEE
T ss_pred CccEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecCC-----------CccCCcCCccccC-ceEEEEECCcEE
Confidence 356899997 679999999999999999999999999999742 4789988875533 899999999999
Q ss_pred EEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccC--------CCCCchHHHHHHcCCCCccEEE
Q 010696 147 SGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--------GNATPLWYNMVRQGHISQKIFS 218 (503)
Q Consensus 147 ~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--------~~~~~~~~~l~~qg~i~~~~FS 218 (503)
.|.+++|+|+||+.+++++.||+++...+ + ..++||||||++..+. ...++++++|++||+|++++||
T Consensus 69 ~G~~~~Dtv~~g~~~v~~~~fg~~~~~~~--~--~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS 144 (340)
T 1wkr_A 69 SGTEYTDTVTLGSLTIPKQSIGVASRDSG--F--DGVDGILGVGPVDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLA 144 (340)
T ss_dssp EEEEEEEEEEETTEEEEEEEEEEEEEEES--C--TTCSEEEECSCGGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEE
T ss_pred EEEEEEEEEEECCEEEcceEEEEEEccCC--C--cCCCcEEECCccccccccccccccccCCCHHHHHHHcCCCCCCEEE
Confidence 99999999999999999999999998654 2 2579999999988765 3567899999999999999999
Q ss_pred EEecCCC-CCCCccEEEeCcccCCCcccCeeEEeccc----ccceEEEEeeEEEcC-eEeeeccCCceEEEccCccCccc
Q 010696 219 LWLNQDP-NSEVGGEIIFGGFDWRHFRGSHIYVPITE----KGYWQIKVGDILIEN-SSTGFCEDGCTAILDSGTSVLAG 292 (503)
Q Consensus 219 l~l~~~~-~~~~~G~l~fGgiD~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~~-~~~~~~~~~~~aiiDTGTt~i~l 292 (503)
+||.+.. .....|+|+|||+|+++|.|++.|+|+.. .++|.|. ++|.|++ +.+. .+..+||||||+++++
T Consensus 145 ~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~~~l~---~~~~aiiDSGTt~~~l 220 (340)
T 1wkr_A 145 VSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSSTSIL---SSTAGIVDTGTTLTLI 220 (340)
T ss_dssp EECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTTEEEE---EEEEEEECTTBCSEEE
T ss_pred EEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCCeEcc---CCCeEEEeCCcccccC
Confidence 9998742 12347999999999999999999999987 7899999 9999998 7663 2458999999999999
Q ss_pred CHHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCC
Q 010696 293 PTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSIN 372 (503)
Q Consensus 293 P~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~ 372 (503)
|.+++++|.+++++. +
T Consensus 221 P~~~~~~l~~~~~a~---------------------------------------~------------------------- 236 (340)
T 1wkr_A 221 ASDAFAKYKKATGAV---------------------------------------A------------------------- 236 (340)
T ss_dssp CHHHHHHHHHHHTCE---------------------------------------E-------------------------
T ss_pred CHHHHHHHHHhhCCE---------------------------------------E-------------------------
Confidence 999999999888754 0
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeec
Q 010696 373 ESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIE 452 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~ 452 (503)
....|.|.+||+....+|+|+|+|+|.+++|+|++|+++..
T Consensus 237 ---------------------------------------~~~~g~~~~~C~~~~~~p~i~f~f~g~~~~i~~~~yi~~~~ 277 (340)
T 1wkr_A 237 ---------------------------------------DNNTGLLRLTTAQYANLQSLFFTIGGQTFELTANAQIWPRN 277 (340)
T ss_dssp ---------------------------------------CTTTSSEEECHHHHHTCCCEEEEETTEEEEECTGGGBCCGG
T ss_pred ---------------------------------------cCCCCeEEeeccccccCCcEEEEECCEEEEEcHHHhccccc
Confidence 12246789999877789999999999999999999998654
Q ss_pred c-----CcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 453 E-----GHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 453 ~-----~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
. +....|++.|...+.....++.||||++|||++|+|||++|+|||||+++
T Consensus 278 ~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 333 (340)
T 1wkr_A 278 LNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTS 333 (340)
T ss_dssp GGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECT
T ss_pred cccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecC
Confidence 2 12357998887655333334579999999999999999999999999975
No 27
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.4e-56 Score=472.69 Aligned_cols=325 Identities=27% Similarity=0.445 Sum_probs=263.2
Q ss_pred eceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEEEE
Q 010696 71 YLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQISGF 149 (503)
Q Consensus 71 ~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~G~ 149 (503)
+|.+..+..|+++|+||||||+|+|+|||||+++||+|..| |..++.|||++|+||+.. +.|.+.|++|++.|.
T Consensus 67 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c-----c~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 141 (455)
T 3lpj_A 67 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 141 (455)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred cccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc-----cccCCcccCCCCCCcccCCccEEEEeCCeEEEEE
Confidence 45556678999999999999999999999999999999887 667899999999999999 999999999999999
Q ss_pred EEEEEEEECC-eEee-eeEEEEEEeeCCccccccccceeeecccccccCC--CCCchHHHHHHcCCCCccEEEEEecCCC
Q 010696 150 FSQDNVKIGD-MIIK-DQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQKIFSLWLNQDP 225 (503)
Q Consensus 150 ~~~D~v~lg~-~~i~-~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~l~~qg~i~~~~FSl~l~~~~ 225 (503)
+++|+|+|++ ..++ .+.|+++............++||||||++..+.. ..++++++|++|+.|+ ++||+||++..
T Consensus 142 ~~~Dtv~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~L~~~~ 220 (455)
T 3lpj_A 142 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 220 (455)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEEEEEEECCCcceeeEEEEEEEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCC-ceeEEEecccc
Confidence 9999999984 3333 3568887765543223467899999999987754 3788999999999997 99999997631
Q ss_pred C--------CCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeecc---CCceEEEccCccCcccCH
Q 010696 226 N--------SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGPT 294 (503)
Q Consensus 226 ~--------~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGTt~i~lP~ 294 (503)
. ....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|.|+++.+.+.. ....+||||||+++++|.
T Consensus 221 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 300 (455)
T 3lpj_A 221 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 300 (455)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEH
T ss_pred ccccccccccCCCceEEECCcCcccccCceEEEecCCCceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCH
Confidence 0 23489999999999999999999999999999999999999999875422 256899999999999999
Q ss_pred HHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcc
Q 010696 295 TVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINES 374 (503)
Q Consensus 295 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
+++++|.+++++... . ..+..
T Consensus 301 ~~~~~i~~~i~~~~~----~----~~~~~--------------------------------------------------- 321 (455)
T 3lpj_A 301 KVFEAAVKSIKAASS----T----EKFPD--------------------------------------------------- 321 (455)
T ss_dssp HHHHHHHHHHHHHTT----T----SCCCH---------------------------------------------------
T ss_pred HHHHHHHHHhhhhcc----c----cccCc---------------------------------------------------
Confidence 999999999976510 0 00000
Q ss_pred ccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCCC-----CCeEEEEECCE------EEEeC
Q 010696 375 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIAS-----MPYVSFTIGNR------SFPLS 443 (503)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~-----~P~i~f~~~g~------~~~l~ 443 (503)
.....+.++|+.... +|+|+|+|+|. +++|+
T Consensus 322 --------------------------------------~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 363 (455)
T 3lpj_A 322 --------------------------------------GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 363 (455)
T ss_dssp --------------------------------------HHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred --------------------------------------ccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEEC
Confidence 000223568876654 89999999775 59999
Q ss_pred cccceEeeccCc--ceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 444 PEQYIFKIEEGH--STICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 444 p~~yi~~~~~~~--~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
|++|+++..+.. ...|++ |... +..+.||||++|||++|+|||++|+|||||+++
T Consensus 364 ~~~yi~~~~~~~~~~~~C~~-f~~~----~~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 420 (455)
T 3lpj_A 364 PQQYLRPVEDVATSQDDCYK-FAIS----QSSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 420 (455)
T ss_dssp HHHHEEEECCTTCCSCEEEE-ECEE----EESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred HHHheEeccCCCCCCceEEE-Eecc----CCCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 999999865432 258996 3211 123579999999999999999999999999974
No 28
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=3e-55 Score=452.99 Aligned_cols=324 Identities=24% Similarity=0.424 Sum_probs=259.8
Q ss_pred EeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEEE
Q 010696 70 VYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQISG 148 (503)
Q Consensus 70 ~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~G 148 (503)
.+|.+..+..|+++|+||||||+++|+|||||+++||+|..|. .| ++.|||++|+||+.. +.|.+.|++|++.|
T Consensus 5 ~~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~---~~--~~~f~~~~SsT~~~~~~~~~i~Yg~Gs~~G 79 (383)
T 2ewy_A 5 DNLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHS---YI--DTYFDTERSSTYRSKGFDVTVKYTQGSWTG 79 (383)
T ss_dssp TCEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBT---TB--SCCCCGGGCTTCEEEEEEEEEECSSCEEEE
T ss_pred eeccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCC---cc--ccCcccccCccceeCCceEEEEECCcEEEE
Confidence 3677777889999999999999999999999999999999885 44 688999999999999 99999999999999
Q ss_pred EEEEEEEEECCeE-ee-eeEEEEEEeeCCccccccccceeeecccccccC--CCCCchHHHHHHcCCCCccEEEEEecCC
Q 010696 149 FFSQDNVKIGDMI-IK-DQEFVEVTKEGLLPFLALQFDGILGLGFRDIAA--GNATPLWYNMVRQGHISQKIFSLWLNQD 224 (503)
Q Consensus 149 ~~~~D~v~lg~~~-i~-~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~--~~~~~~~~~l~~qg~i~~~~FSl~l~~~ 224 (503)
.+++|+|+|++.. .. .+.|++.....+.......++||||||++..+. ....+++++|++|+.+ +++||+||++.
T Consensus 80 ~~~~Dtv~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i-~~~FS~~l~~~ 158 (383)
T 2ewy_A 80 FVGEDLVTIPKGFNTSFLVNIATIFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANI-PNVFSMQMCGA 158 (383)
T ss_dssp EEEEEEEEETTTEEEEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTC-CSCEEEEECCC
T ss_pred EEEEEEEEECCCccceeEEEEEEEEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCC-CcceEEEeecc
Confidence 9999999998632 22 356777655443222235679999999988765 4578899999999999 79999999752
Q ss_pred -----CCCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccC---CceEEEccCccCcccCHHH
Q 010696 225 -----PNSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCED---GCTAILDSGTSVLAGPTTV 296 (503)
Q Consensus 225 -----~~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~---~~~aiiDTGTt~i~lP~~~ 296 (503)
......|+|+|||+|+++|.|++.|+|+.++.+|.|.+++|+|+++.+.+... ...+||||||+++++|+++
T Consensus 159 ~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~ 238 (383)
T 2ewy_A 159 GLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEEWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKV 238 (383)
T ss_dssp ---------CCEEEEETSCCGGGCCSCEEEEECSSBTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHH
T ss_pred ccccccCCCCCeEEEeCccchhhccCccEEEecCCCceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHH
Confidence 12234899999999999999999999999999999999999999988754222 4689999999999999999
Q ss_pred HHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcccc
Q 010696 297 VAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTL 376 (503)
Q Consensus 297 ~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (503)
+++|.+++++.... .+
T Consensus 239 ~~~l~~~i~~~~~~--------~~-------------------------------------------------------- 254 (383)
T 2ewy_A 239 FDAVVEAVARASLI--------PE-------------------------------------------------------- 254 (383)
T ss_dssp HHHHHHHHHHTTCS--------SC--------------------------------------------------------
T ss_pred HHHHHHHHhhhccc--------cc--------------------------------------------------------
Confidence 99999999755100 00
Q ss_pred chhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCC-CCceEEeCCCCC-----CCCeEEEEECC------EEEEeCc
Q 010696 377 CAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNP-MGKSFINCDDIA-----SMPYVSFTIGN------RSFPLSP 444 (503)
Q Consensus 377 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~-~~~~~~~C~~~~-----~~P~i~f~~~g------~~~~l~p 444 (503)
.+.. ...+.++|.... .+|+|+|+|+| .+++|+|
T Consensus 255 ----------------------------------~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~ 300 (383)
T 2ewy_A 255 ----------------------------------FSDGFWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILP 300 (383)
T ss_dssp ----------------------------------CCHHHHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECH
T ss_pred ----------------------------------CccccccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEECh
Confidence 0000 012467886542 58999999976 3899999
Q ss_pred ccceEeecc-CcceeEEE-eeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 445 EQYIFKIEE-GHSTICIS-GFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 445 ~~yi~~~~~-~~~~~C~~-~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
++|+++..+ +....|+. ++.. ..+.||||++|||++|+|||++|+|||||+++
T Consensus 301 ~~yi~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 355 (383)
T 2ewy_A 301 QLYIQPMMGAGLNYECYRFGISP------STNALVIGATVMEGFYVIFDRAQKRVGFAASP 355 (383)
T ss_dssp HHHEEEECCCTTCSEEEEESEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEECT
T ss_pred HHheeecccCCCCceeEEEEecC------CCCcEEEChHHhCCeeEEEECCCCeEEEEecc
Confidence 999987642 23457985 4432 12479999999999999999999999999974
No 29
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=9e-55 Score=452.16 Aligned_cols=322 Identities=27% Similarity=0.453 Sum_probs=259.0
Q ss_pred ceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEEEEE
Q 010696 72 LNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQISGFF 150 (503)
Q Consensus 72 l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~G~~ 150 (503)
|....+..|+++|+||||||+++|+|||||+++||+|..| |..++.|+|++|+||+.. +.|.+.|++|++.|.+
T Consensus 22 l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c-----~~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~~ 96 (402)
T 3vf3_A 22 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH-----PFLHRYYQRQLSSTYRDLRKGVYVPYTQGKWEGEL 96 (402)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC-----TTCSCCCCGGGCTTCEEEEEEEEEECSSCEEEEEE
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC-----CcccCCcCcccCcccccCCCEEEEEECcEEEEEEE
Confidence 4444567999999999999999999999999999999987 566899999999999999 9999999999999999
Q ss_pred EEEEEEEC-CeEeee-eEEEEEEeeCCccccccccceeeecccccccCCC--CCchHHHHHHcCCCCccEEEEEecCCC-
Q 010696 151 SQDNVKIG-DMIIKD-QEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGN--ATPLWYNMVRQGHISQKIFSLWLNQDP- 225 (503)
Q Consensus 151 ~~D~v~lg-~~~i~~-~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~--~~~~~~~l~~qg~i~~~~FSl~l~~~~- 225 (503)
++|+|+|+ +..++. +.|+++....+.......++||||||++..+... .++++++|++|+.|+ ++||+||++..
T Consensus 97 ~~D~v~ig~~~~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~-~~FS~~l~~~~~ 175 (402)
T 3vf3_A 97 GTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAGF 175 (402)
T ss_dssp EEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCC-
T ss_pred EEEEEEECCccccceeeeEEEEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCc-cceEEEeecccc
Confidence 99999998 455543 3467766554432234678999999999877643 788999999999997 99999997531
Q ss_pred ----C---CCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeecc---CCceEEEccCccCcccCHH
Q 010696 226 ----N---SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGPTT 295 (503)
Q Consensus 226 ----~---~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGTt~i~lP~~ 295 (503)
. ....|+|+|||+|+++|.|+++|+|+.+..+|.|.+++|.|+++.+.+.. ....++|||||+++++|.+
T Consensus 176 ~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~ 255 (402)
T 3vf3_A 176 PLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKK 255 (402)
T ss_dssp ------------EEEEESSCCGGGEEEEEEEEECSSBTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHH
T ss_pred cccccccccCCCCEEEeCCcCcccccCceEEEeCCcCcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHH
Confidence 0 23489999999999999999999999999999999999999999875421 2568999999999999999
Q ss_pred HHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccc
Q 010696 296 VVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINEST 375 (503)
Q Consensus 296 ~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (503)
++++|.+++++... ..
T Consensus 256 ~~~~i~~~i~~~~~--------------------~~-------------------------------------------- 271 (402)
T 3vf3_A 256 VFEAAVKSIKAASS--------------------TE-------------------------------------------- 271 (402)
T ss_dssp HHHHHHHHHHHHTT--------------------TS--------------------------------------------
T ss_pred HHHHHHHHHhhhcc--------------------cc--------------------------------------------
Confidence 99999999976510 00
Q ss_pred cchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC-CCCceEEeCCCCC-----CCCeEEEEECCE------EEEeC
Q 010696 376 LCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN-PMGKSFINCDDIA-----SMPYVSFTIGNR------SFPLS 443 (503)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~-~~~~~~~~C~~~~-----~~P~i~f~~~g~------~~~l~ 443 (503)
..+. ....+.++|.... .+|+|+|+|+|. +++|+
T Consensus 272 ----------------------------------~~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 317 (402)
T 3vf3_A 272 ----------------------------------KFPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 317 (402)
T ss_dssp ----------------------------------CCCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred ----------------------------------ccCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEEC
Confidence 0000 0112356887654 689999999764 59999
Q ss_pred cccceEeeccCc--ceeEEE-eeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 444 PEQYIFKIEEGH--STICIS-GFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 444 p~~yi~~~~~~~--~~~C~~-~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
|++|+++..+.. ...|+. ++.. ..+.||||++|||++|+|||++++|||||+++
T Consensus 318 ~~~yi~~~~~~~~~~~~C~~~~~~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 374 (402)
T 3vf3_A 318 PQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 374 (402)
T ss_dssp HHHHEEECCCGGGTTEEEEEECEEE------ESSCEEECHHHHTTEEEEEEGGGTEEEEEEET
T ss_pred HHHheehhccCCCCCceEEEEeccC------CCCcEEEChHHhCCeEEEEECCCCEEEEEecc
Confidence 999999865432 248996 3321 23579999999999999999999999999974
No 30
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=2e-54 Score=448.49 Aligned_cols=324 Identities=27% Similarity=0.424 Sum_probs=258.7
Q ss_pred eceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeeceeEEEE
Q 010696 71 YLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQISGF 149 (503)
Q Consensus 71 ~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs~~G~ 149 (503)
+|.+..+..|+++|+||||||+++|+|||||+++||+|..|. .| ++.|||++|+||+.. +.|.+.|++|++.|.
T Consensus 14 ~l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~---~~--~~~y~~~~SsT~~~~~~~~~i~Yg~Gs~~G~ 88 (395)
T 2qp8_A 14 NLRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHP---FL--HRYYQRQLSSTYRDLRKGVYVPYTQGKWEGE 88 (395)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCT---TC--SCCCCGGGCTTCEEEEEEEEEECSSCEEEEE
T ss_pred ecCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCc---cc--cCCcCcccCCCceeCCceEEEEECCcEEEEE
Confidence 455666889999999999999999999999999999999885 33 689999999999999 999999999999999
Q ss_pred EEEEEEEEC-CeEeee-eEEEEEEeeCCccccccccceeeecccccccCC--CCCchHHHHHHcCCCCccEEEEEecCCC
Q 010696 150 FSQDNVKIG-DMIIKD-QEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG--NATPLWYNMVRQGHISQKIFSLWLNQDP 225 (503)
Q Consensus 150 ~~~D~v~lg-~~~i~~-~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~--~~~~~~~~l~~qg~i~~~~FSl~l~~~~ 225 (503)
+++|+|+|+ +..++. +.|++.....+.......++||||||++..+.. ...+++++|++|+.|+ ++||+||++..
T Consensus 89 ~~~Dtv~ig~g~~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~-~~FS~~L~~~~ 167 (395)
T 2qp8_A 89 LGTDLVSIPHGPNVTVRANIAAITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVP-NLFSLQLCGAG 167 (395)
T ss_dssp EEEEEEECTTSCSCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCC-SCEEEEECCCS
T ss_pred EEeEEEEECCCCCceEEEEEEEEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCc-ceEEEEecccc
Confidence 999999998 555543 567766654332112357799999999887643 4788999999999997 89999998631
Q ss_pred C--------CCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeecc---CCceEEEccCccCcccCH
Q 010696 226 N--------SEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCE---DGCTAILDSGTSVLAGPT 294 (503)
Q Consensus 226 ~--------~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~---~~~~aiiDTGTt~i~lP~ 294 (503)
- ....|+|+|||+|+++|.|++.|+|+.+..+|.|.+++|+|+++.+.+.. ....+||||||+++++|+
T Consensus 168 ~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~ 247 (395)
T 2qp8_A 168 FPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRREWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPK 247 (395)
T ss_dssp SCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSBTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEH
T ss_pred ccccccccccCCCcEEEECCcCcccccCceEEeccCCCceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCH
Confidence 0 12479999999999999999999999999999999999999998875322 246799999999999999
Q ss_pred HHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCcc
Q 010696 295 TVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINES 374 (503)
Q Consensus 295 ~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (503)
+++++|.+++++.... .++..
T Consensus 248 ~~~~~l~~~i~~~~~~--------~~~~~--------------------------------------------------- 268 (395)
T 2qp8_A 248 KVFEAAVKSIKAASST--------EKFPD--------------------------------------------------- 268 (395)
T ss_dssp HHHHHHHHHHHHHTTT--------SCCCH---------------------------------------------------
T ss_pred HHHHHHHHHHhhhccc--------ccCCc---------------------------------------------------
Confidence 9999999998654100 00000
Q ss_pred ccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCCCC-----CCCeEEEEECCE------EEEeC
Q 010696 375 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDDIA-----SMPYVSFTIGNR------SFPLS 443 (503)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~~~-----~~P~i~f~~~g~------~~~l~ 443 (503)
.....+.++|.... .+|+|+|+|+|. +++|+
T Consensus 269 --------------------------------------~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~ 310 (395)
T 2qp8_A 269 --------------------------------------GFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITIL 310 (395)
T ss_dssp --------------------------------------HHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEEC
T ss_pred --------------------------------------cccccccccccccccchHhhCCcEEEEEccCCCCceEEEEEC
Confidence 00011245776543 489999999764 79999
Q ss_pred cccceEeecc--CcceeEE-EeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 444 PEQYIFKIEE--GHSTICI-SGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 444 p~~yi~~~~~--~~~~~C~-~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
|++|+++..+ .....|+ .++.. ..+.||||++|||++|+|||++|+|||||+++
T Consensus 311 p~~yi~~~~~~~~~~~~C~~~~i~~------~~~~~ILG~~fl~~~yvvfD~~~~rIGfA~~~ 367 (395)
T 2qp8_A 311 PQQYLRPVEDVATSQDDCYKFAISQ------SSTGTVMGAVIMEGFYVVFDRARKRIGFAVSA 367 (395)
T ss_dssp HHHHEEEECCTTCCSCEEEEECEEE------ESSCEEECHHHHTTEEEEEETTTTEEEEEEET
T ss_pred HHHhEeecccCCCCCceEEEEEecC------CCCcEEEChHHhCCeeEEEECCCCEEEEEecc
Confidence 9999998653 2335897 45542 12579999999999999999999999999974
No 31
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=3.1e-53 Score=440.56 Aligned_cols=324 Identities=18% Similarity=0.235 Sum_probs=254.1
Q ss_pred ceeEece-eccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCC-----------CCCCCcccccCCcc------cCCCC
Q 010696 67 ADVVYLN-NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSS-----------KCLFSISCYLHSRY------RARLS 128 (503)
Q Consensus 67 ~~~~~l~-~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~-----------~C~~~~~C~~~~~y------~p~~S 128 (503)
...+||. |+.+.+|+++|.||||||++.|+|||||+++||+|. .|. +..|..++.| ++.+|
T Consensus 9 ~~~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~~~~Sst~~~~~C~-s~~C~~~~~~~c~~c~~~~~s 87 (403)
T 3aup_A 9 LVVLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCEQQYSSKTYQAPFCH-STQCSRANTHQCLSCPAASRP 87 (403)
T ss_dssp CEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSCCCCSSCBCCCTT-BHHHHHTTCCCEEECSSSCBT
T ss_pred cEEEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCCCCCCCCCCCccCCC-CccccCccccCccccCCCCCC
Confidence 4568898 778999999999999999999999999999999999 665 4568777788 66554
Q ss_pred cccccc-ceeEEEee-c-eeEEEEEEEEEEEECC-----------eEeeeeEEEEEEeeCCccccccccceeeecccccc
Q 010696 129 RTYTKI-VPCKIHYG-S-GQISGFFSQDNVKIGD-----------MIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDI 194 (503)
Q Consensus 129 sT~~~~-~~~~~~Yg-~-gs~~G~~~~D~v~lg~-----------~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 194 (503)
+ +.+. +.|.+.|+ + +++.|.+++|+|+|++ +.++++.||++.......+....++||||||++.+
T Consensus 88 ~-~~~~~~~~~~~Y~~d~~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~ 166 (403)
T 3aup_A 88 G-CHKNTCGLMSTNPITQQTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLVQKGLPRNTQGVAGLGHAPI 166 (403)
T ss_dssp T-BCSSEEEEEEEETTTTEEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGGSSSSSTTCCEEEECSSSTT
T ss_pred C-CCCCcceeEeecCCCCceeeEEEEEEEEEecccCCccccccccccccCEEEECCcccccccCCCCCCceEEECCCCCc
Confidence 3 4444 99999997 4 4589999999999987 89999999999875432234467899999999866
Q ss_pred cCCCCCchHHHHHHcCCCCccEEEEEecCCCCCCCccEEEeCcccCCCc--c-c-----CeeEEecccc--cceEEEEee
Q 010696 195 AAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRHF--R-G-----SHIYVPITEK--GYWQIKVGD 264 (503)
Q Consensus 195 s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~l~fGgiD~~~~--~-g-----~l~~~p~~~~--~~w~v~l~~ 264 (503)
+ +..+|. ++.+.+++||+||.+.. ...|.|+||| |+++| . | ++.|+|+... ++|.|.+++
T Consensus 167 s------~~~ql~-~~~~~~~~FS~~L~~~~--~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~~~~~y~v~l~~ 236 (403)
T 3aup_A 167 S------LPNQLA-SHFGLQRQFTTCLSRYP--TSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTITLQGEYNVRVNS 236 (403)
T ss_dssp S------HHHHHH-HHHTCCSEEEEECCSCT--TSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEECTTSCEEECEEE
T ss_pred C------HHHHHH-hhcCCCCeEEEEcCCCC--CCCeeEEECC-CchhccccccccccCceeecccccCCCCcceEEEEE
Confidence 4 555564 55577799999998752 2489999999 99888 5 5 9999999876 899999999
Q ss_pred EEEcCeEe-eeccC--------CceEEEccCccCcccCHHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCC
Q 010696 265 ILIENSST-GFCED--------GCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQP 335 (503)
Q Consensus 265 i~v~~~~~-~~~~~--------~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~ 335 (503)
|+|+++.+ ..... ...+||||||++++||++++++|.+++.+.- ..+. .
T Consensus 237 i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~----------~~~~---------~--- 294 (403)
T 3aup_A 237 IRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQL----------PKQA---------Q--- 294 (403)
T ss_dssp EEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTS----------CGGG---------E---
T ss_pred EEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHh----------cccc---------c---
Confidence 99999877 42211 2349999999999999999999999984330 0000 0
Q ss_pred CcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCC
Q 010696 336 ETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPM 415 (503)
Q Consensus 336 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~ 415 (503)
.-+...
T Consensus 295 --------------------------------------------------------------------------~~~~~~ 300 (403)
T 3aup_A 295 --------------------------------------------------------------------------VKSVAP 300 (403)
T ss_dssp --------------------------------------------------------------------------ECCCTT
T ss_pred --------------------------------------------------------------------------cCCCCC
Confidence 000112
Q ss_pred CceEEeCCCCCCCCeEEEEECC---EEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeC
Q 010696 416 GKSFINCDDIASMPYVSFTIGN---RSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDF 492 (503)
Q Consensus 416 ~~~~~~C~~~~~~P~i~f~~~g---~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~ 492 (503)
..+.++|+.+..+|+|+|+|+| .+|+|+|++|+++.. ....|+ +|...+. ...+.||||+.|||++|+|||+
T Consensus 301 ~~~c~~c~~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~--~~~~C~-~~~~~~~--~~~~~~ILG~~fl~~~yvvfD~ 375 (403)
T 3aup_A 301 FGLCFNSNKINAYPSVDLVMDKPNGPVWRISGEDLMVQAQ--PGVTCL-GVMNGGM--QPRAEITLGARQLEENLVVFDL 375 (403)
T ss_dssp CSCEECGGGCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEE-CEEECCS--CCSSSEEECHHHHTTSCEEEET
T ss_pred CCceEECCCcCcCCcEEEEEcCCCceEEEEcccceEEEcC--CCeEEE-EEEcCCC--CCCCcEEEChHHhcCeEEEEEC
Confidence 2367789877789999999987 499999999999754 246899 7876542 1235899999999999999999
Q ss_pred CCCeEEE-EecC
Q 010696 493 GNLQIGF-AEAA 503 (503)
Q Consensus 493 ~~~riGf-a~~~ 503 (503)
+|+|||| |+++
T Consensus 376 ~~~rIGf~A~~~ 387 (403)
T 3aup_A 376 ARSRVGFSTSSL 387 (403)
T ss_dssp TTTEEEEESSCG
T ss_pred CCCEEEEecccc
Confidence 9999999 7753
No 32
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=1.3e-52 Score=435.91 Aligned_cols=328 Identities=18% Similarity=0.205 Sum_probs=250.4
Q ss_pred ceeEeceec-cCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCC-----------CCCcccccCCcccCCC-----Cc
Q 010696 67 ADVVYLNNY-LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC-----------LFSISCYLHSRYRARL-----SR 129 (503)
Q Consensus 67 ~~~~~l~~~-~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C-----------~~~~~C~~~~~y~p~~-----Ss 129 (503)
...+|+... .+.+|+++|+||||||+|.|++||||+++||+|..| . +..|..++.|++.. ++
T Consensus 8 ~~~~pv~~d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~~c~~Sst~~~v~C~-s~~C~~~~~~~~~~c~s~~~~ 86 (413)
T 3vla_A 8 ALVVPVKKDASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCDQNYVSSTYRPVRCR-TSQCSLSGSIACGDCFNGPRP 86 (413)
T ss_dssp EEEEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECSSSCCCTTCEECBTT-SHHHHHTTCCEEECCSSCCBT
T ss_pred cEEEEeeecCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccCCCCCCCCcCccCCC-cccccccccCCCcccccCCCC
Confidence 444565543 477999999999999999999999999999999654 3 45677777887642 34
Q ss_pred ccccc-ceeEEEee-ce-eEEEEEEEEEEEEC---------CeEeeeeEEEEEEeeCCccccccccceeeecccccccCC
Q 010696 130 TYTKI-VPCKIHYG-SG-QISGFFSQDNVKIG---------DMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAG 197 (503)
Q Consensus 130 T~~~~-~~~~~~Yg-~g-s~~G~~~~D~v~lg---------~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~ 197 (503)
++... +.|.+.|+ +| +..|++++|+|+|+ ++.++++.|||+..+.... ....+|||||||++.++
T Consensus 87 ~c~~~~c~~~i~Y~~d~~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g-~~~~~dGIlGLg~~~lS-- 163 (413)
T 3vla_A 87 GCNNNTCGVFPENPVINTATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQN-LASGVVGMAGLGRTRIA-- 163 (413)
T ss_dssp TBCSSEEEECCEETTTTEECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTT-SCTTCCEEEECSSSSSS--
T ss_pred CCCCCcCcceeecCcCCceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccC-cccccccccccCCCCcc--
Confidence 56555 99999995 54 57999999999997 3688999999998753211 23568999999998765
Q ss_pred CCCchHHHHHHcCCCCccEEEEEecCCCCCCCccEEEeCcccCCC-----cccC-eeEEecccc--------------cc
Q 010696 198 NATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWRH-----FRGS-HIYVPITEK--------------GY 257 (503)
Q Consensus 198 ~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~l~fGgiD~~~-----~~g~-l~~~p~~~~--------------~~ 257 (503)
+..+|.+++.+ +++||+||.+. ...+|+|+|||+|..+ +.|+ +.|+|+..+ .+
T Consensus 164 ----l~sql~~~~~i-~~~FS~cL~~~--~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~~~~~~ 236 (413)
T 3vla_A 164 ----LPSQFASAFSF-KRKFAMCLSGS--TSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQGEPSVE 236 (413)
T ss_dssp ----HHHHHHHHHTC-CSEEEEECCSC--SSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTTCCCCS
T ss_pred ----hHHHHhhhcCC-CceEEEeCCCC--CCCceEEEECCCcccccccccccCCceeEeecccCCccccccccccCCCce
Confidence 77889999988 89999999884 2348999999998753 7888 999999764 69
Q ss_pred eEEEEeeEEEcCeEeeecc--------CCceEEEccCccCcccCHHHHHHHHHHhCCccccccccceeeeecchhhhhhh
Q 010696 258 WQIKVGDILIENSSTGFCE--------DGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFL 329 (503)
Q Consensus 258 w~v~l~~i~v~~~~~~~~~--------~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~ 329 (503)
|.|+|++|+||++.+.... .++.+||||||++++||+++|++|.++|.+.-. . ..+
T Consensus 237 y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~--~------~~~-------- 300 (413)
T 3vla_A 237 YFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESA--A------RNI-------- 300 (413)
T ss_dssp CEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHH--H------TTC--------
T ss_pred EEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhc--c------cCC--------
Confidence 9999999999999876432 357899999999999999999999999865400 0 000
Q ss_pred hcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhc
Q 010696 330 ISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCE 409 (503)
Q Consensus 330 ~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 409 (503)
....+. ... ..|+
T Consensus 301 -~~~~~~---~~~---------------------------------------------------------------~~C~ 313 (413)
T 3vla_A 301 -TRVASV---APF---------------------------------------------------------------GACF 313 (413)
T ss_dssp -CEECCC---TTC---------------------------------------------------------------SCEE
T ss_pred -CcCCCC---CCC---------------------------------------------------------------ccee
Confidence 000000 000 1122
Q ss_pred cCCCCCCceEEeCCC----CCCCCeEEEEECC--EEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhh
Q 010696 410 VLPNPMGKSFINCDD----IASMPYVSFTIGN--RSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFL 483 (503)
Q Consensus 410 ~~~~~~~~~~~~C~~----~~~~P~i~f~~~g--~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl 483 (503)
.. ++.. ...+|+|+|+|+| +.|+|+|++|+++..+ ...|+ +|...+. ..++.||||+.||
T Consensus 314 ~~---------~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~--~~~~~~IlGd~fl 379 (413)
T 3vla_A 314 ST---------DNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCL-GVVDGGS--NLRTSIVIGGHQL 379 (413)
T ss_dssp EC---------TTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEE-CEEEEES--SCSSSEEECHHHH
T ss_pred cc---------CCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEE-EEEecCC--CcccceeEehhhh
Confidence 22 1111 1278999999987 8999999999998653 36898 5665442 1246899999999
Q ss_pred cceEEEEeCCCCeEEEEec
Q 010696 484 RAYHTVFDFGNLQIGFAEA 502 (503)
Q Consensus 484 ~~~y~vfD~~~~riGfa~~ 502 (503)
|++|+|||++|+|||||++
T Consensus 380 ~~~~vvfD~~~~riGfa~~ 398 (413)
T 3vla_A 380 EDNLVQFDLATSRVGFSGT 398 (413)
T ss_dssp TTEEEEEETTTTEEEEEEE
T ss_pred cCeEEEEECCCCEEEEEEe
Confidence 9999999999999999986
No 33
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=4.9e-49 Score=380.20 Aligned_cols=237 Identities=56% Similarity=1.026 Sum_probs=216.5
Q ss_pred ceeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCcccccc-ceeEEEeecee
Q 010696 67 ADVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ 145 (503)
Q Consensus 67 ~~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs 145 (503)
...+||.|+.+.+|+++|.||||||+++|+|||||+++||+|..|..+..|..++.|||++|+||+.. +.+.+.|++|+
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~~~C~~~~~y~~~~SsT~~~~~~~~~i~Yg~Gs 81 (239)
T 1b5f_A 2 SAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINSKACRAHSMYESSDSSTYKENGTFGAIIYGTGS 81 (239)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred CceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCCcccCCCCCCCCccCCCeeeCCcEEEEEECCCc
Confidence 45689999999999999999999999999999999999999999964457999999999999999998 99999999999
Q ss_pred EEEEEEEEEEEECCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCC
Q 010696 146 ISGFFSQDNVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDP 225 (503)
Q Consensus 146 ~~G~~~~D~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~ 225 (503)
+.|.+++|+|++++..++++.||++....+..|....++||||||++..+ .|++++|++||+|.+++||+||.+..
T Consensus 82 ~~G~~~~D~v~~g~~~v~~~~fg~~~~~~~~~f~~~~~~GilGLg~~~~s----~p~~~~l~~qg~i~~~~FS~~l~~~~ 157 (239)
T 1b5f_A 82 ITGFFSQDSVTIGDLVVKEQDFIEATDEADNVFLHRLFDGILGLSFQTIS----VPVWYNMLNQGLVKERRFSFWLNRNV 157 (239)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEECHHHHTTCSCCEEEECSCCSSS----CCHHHHHHHTTCCSSSEEEEEECCSC
T ss_pred EEEEEEEEEEEECCcEEccEEEEEEEeccCccccccCcceEEecCccccc----cHHHHHHHHCCCCCCCEEEEEEeCCC
Confidence 99999999999999999999999998876544566778999999998766 67889999999999999999998864
Q ss_pred CCCCccEEEeCcccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhC
Q 010696 226 NSEVGGEIIFGGFDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIG 305 (503)
Q Consensus 226 ~~~~~G~l~fGgiD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~ 305 (503)
+....|+|+|||+|+++|.|++.|+|+.++++|.|.+++|.|+++.+.++..+..+||||||+++++|++++++|.++++
T Consensus 158 ~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 158 DEEEGGELVFGGLDPNHFRGDHTYVPVTYQYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp SSSCCEEEEETSCCGGGEEEEEEEEEEEEETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred CCCCCeEEEECCcChhhccCceEEEEcccCCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 33458999999999999999999999998999999999999999987666677899999999999999999999999997
Q ss_pred Cc
Q 010696 306 AE 307 (503)
Q Consensus 306 ~~ 307 (503)
++
T Consensus 238 a~ 239 (239)
T 1b5f_A 238 AN 239 (239)
T ss_dssp CC
T ss_pred CC
Confidence 63
No 34
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=8.5e-50 Score=411.66 Aligned_cols=320 Identities=18% Similarity=0.254 Sum_probs=238.0
Q ss_pred eEece-eccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC--------CCCCcccccCCcccCCCCcccc------c
Q 010696 69 VVYLN-NYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK--------CLFSISCYLHSRYRARLSRTYT------K 133 (503)
Q Consensus 69 ~~~l~-~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~--------C~~~~~C~~~~~y~p~~SsT~~------~ 133 (503)
.+||. ++.+.+|+++|+|||| |+|||||+++||+|.. |. +..|..++.|++. |+++. .
T Consensus 4 ~~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~~~~~~~~~~C~-s~~C~~~~~~~~~-sc~~~~~~~~~~ 76 (381)
T 1t6e_X 4 LAPVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCDGGQPPAEIPCS-SPTCLLANAYPAP-GCPAPSCGSDKH 76 (381)
T ss_dssp EEEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCCTTCCCCCCBTT-SHHHHHHHSSCCT-TCCCCCC-----
T ss_pred EEeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCCCCCCCCccCCC-CchhccccCCCCC-CCCCccCCcCcC
Confidence 46777 6778999999999998 9999999999999954 43 3467777778876 44432 1
Q ss_pred c--c-eeEEEeeceeE-EEEEEEEEEEECC----eEeeee----EEEEEEeeCCccccccccceeeecccccccCCCCCc
Q 010696 134 I--V-PCKIHYGSGQI-SGFFSQDNVKIGD----MIIKDQ----EFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATP 201 (503)
Q Consensus 134 ~--~-~~~~~Yg~gs~-~G~~~~D~v~lg~----~~i~~~----~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~ 201 (503)
. + .|.++|++|+. .|.+++|+|++++ ..++++ .|||+.......+ ...+|||||||++.++
T Consensus 77 ~~~c~~f~i~YgdGs~~~G~l~~Dtv~ig~~~g~~~v~~~~~~~~Fg~~~~~~~~~~-~~~~dGIlGLg~~~~s------ 149 (381)
T 1t6e_X 77 DKPCTAYPYNPVSGACAAGSLSHTRFVANTTDGSKPVSKVNVGVLAACAPSKLLASL-PRGSTGVAGLANSGLA------ 149 (381)
T ss_dssp -CBCEECCBCTTTCCBCCEEEEEEEEEEEEESSSSEEEEEEEEEEEEECCGGGGTTS-CTTEEEEEECSSSTTS------
T ss_pred CCccccccccccCCceeeEEEEEEEEEeeccCCCccccceeeeeEeecCcccccCCC-CCCCceEEEeCCCcch------
Confidence 2 4 69999999985 8999999999984 567765 5699876522222 3678999999998765
Q ss_pred hHHHHHHcCCCCccEEEEEecCCCCCCCccEEEeCcccCC--CcccCeeEEecccc---cceEEEEeeEEEcCeEeeecc
Q 010696 202 LWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGGFDWR--HFRGSHIYVPITEK---GYWQIKVGDILIENSSTGFCE 276 (503)
Q Consensus 202 ~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~l~fGgiD~~--~~~g~l~~~p~~~~---~~w~v~l~~i~v~~~~~~~~~ 276 (503)
+..+|.+++++ +++||+||.+. .+|+|+|||+|.. ++.|++.|+|+... .+|.|.+++|+|+++.+....
T Consensus 150 ~~~ql~~~~~~-~~~FS~~L~~~----~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~~~y~v~l~~i~vg~~~~~~~~ 224 (381)
T 1t6e_X 150 LPAQVASAQKV-ANRFLLCLPTG----GPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGSPAHYISARSIVVGDTRVPVPE 224 (381)
T ss_dssp HHHHHHHHHTC-CSEEEEECCSS----SCEEEEESCCSCSCHHHHTTCCEEECBCCTTCCSCEECEEEEEETTEECCCCT
T ss_pred hHHHHhhhccc-CceEEEEeCCC----CCeeEEeCCcccccccccCcceeeccccCCCCcceEEEEEEEEEcCEEecCCH
Confidence 66789888854 79999999875 3899999998775 58999999999763 467799999999998875433
Q ss_pred C---CceEEEccCccCcccCHHHHHHHHHHhCCccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCccc
Q 010696 277 D---GCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYM 353 (503)
Q Consensus 277 ~---~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~ 353 (503)
. ++.+||||||+++++|+++|++|.+++.+.- .. +..+++
T Consensus 225 ~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~------------------~~----------------~~~~g~--- 267 (381)
T 1t6e_X 225 GALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKAL------------------AA----------------QHANGA--- 267 (381)
T ss_dssp TCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHH------------------HH----------------C--------
T ss_pred HHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhh------------------cc----------------cccccc---
Confidence 2 3579999999999999999999999886430 00 000000
Q ss_pred ccceeeeeecccCCCCCCCccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC--CCCceEEeCCCC------
Q 010696 354 STGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN--PMGKSFINCDDI------ 425 (503)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~--~~~~~~~~C~~~------ 425 (503)
.++. ....+..+|...
T Consensus 268 --------------------------------------------------------~~~~~~~~~~~~~~C~~~~~~~~~ 291 (381)
T 1t6e_X 268 --------------------------------------------------------PVARAVEAVAPFGVCYDTKTLGNN 291 (381)
T ss_dssp ----------------------------------------------------------CCEECCCTTCSCEEEGGGCCEE
T ss_pred --------------------------------------------------------cccccCCCCCCCCccCCCCCCccc
Confidence 0000 000011234322
Q ss_pred ---CCCCeEEEEEC-CEEEEeCcccceEeeccCcceeEEEeeEeccCC---CCCCCeEEeCHhhhcceEEEEeCCCCeEE
Q 010696 426 ---ASMPYVSFTIG-NRSFPLSPEQYIFKIEEGHSTICISGFIALDVP---PPQGPLWVLGDMFLRAYHTVFDFGNLQIG 498 (503)
Q Consensus 426 ---~~~P~i~f~~~-g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~---~~~~~~~ILG~~Fl~~~y~vfD~~~~riG 498 (503)
..+|+|+|+|+ |++++|++++|+++..+ ...|+ +|...+.+ .+.++.||||+.|||++|+|||++|+|||
T Consensus 292 ~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl-~~~~~~~~~~~~~~~~~~ILGd~fl~~~yvvfD~~~~riG 368 (381)
T 1t6e_X 292 LGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACV-AFVEMKGVAAGDGRAPAVILGGAQMEDFVLDFDMEKKRLG 368 (381)
T ss_dssp TTEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEE-SEEECCCCC------CSEEECHHHHTTEEEEEETTTTEEE
T ss_pred ccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEE-EEEcCCCcccccCCCceEEEChHHhCCcEEEEECCCCEEE
Confidence 26899999997 59999999999997643 46898 57655421 11235899999999999999999999999
Q ss_pred EEecC
Q 010696 499 FAEAA 503 (503)
Q Consensus 499 fa~~~ 503 (503)
||+++
T Consensus 369 fA~~~ 373 (381)
T 1t6e_X 369 FSRLP 373 (381)
T ss_dssp EEECC
T ss_pred Eeccc
Confidence 99974
No 35
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=2.5e-45 Score=354.77 Aligned_cols=241 Identities=40% Similarity=0.860 Sum_probs=211.6
Q ss_pred CCeEeeeeEEEEEEeeCCccccccccceeeecccccccCCCCCchHHHHHHcCCCCccEEEEEecCCCCCCCccEEEeCc
Q 010696 158 GDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGFRDIAAGNATPLWYNMVRQGHISQKIFSLWLNQDPNSEVGGEIIFGG 237 (503)
Q Consensus 158 g~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FSl~l~~~~~~~~~G~l~fGg 237 (503)
|+++++++.||+++...+..|....+|||||||++..+....++++++|++||+|.+++||+||++.......|+|+|||
T Consensus 1 gg~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg 80 (241)
T 1lya_B 1 GGVKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGG 80 (241)
T ss_dssp CCEEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETS
T ss_pred CCeEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECC
Confidence 57889999999999887655667788999999999887767889999999999999999999999864333489999999
Q ss_pred ccCCCcccCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHHHHHHHhCCcccccccccee
Q 010696 238 FDWRHFRGSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVAQINHAIGAEGIVSMQCKTV 317 (503)
Q Consensus 238 iD~~~~~g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~~l~~~l~~~~~~~~~c~~~ 317 (503)
+|+++|.|++.|+|+.+.++|.|.+++|+|+++.+. +..++.+++||||+++++|++++++|.+++++..
T Consensus 81 ~d~~~~~g~l~~~p~~~~~~~~v~l~~i~v~~~~~~-~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~--------- 150 (241)
T 1lya_B 81 TDSKYYKGSLSYLNVTRKAYWQVHLDQVEVASGLTL-CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP--------- 150 (241)
T ss_dssp CCGGGEEEEEEEEECSSBTTBEEEEEEEEETTSCEE-STTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE---------
T ss_pred cCHHHcCCceEEEECccccEEEEEEeEEEECCeeEe-ccCCCEEEEECCCccccCCHHHHHHHHHHhCCee---------
Confidence 999999999999999999999999999999998752 5677899999999999999999999999997551
Q ss_pred eeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHHHHHHHHhhhhhH
Q 010696 318 VFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVFWIQMQLKQQKTK 397 (503)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 397 (503)
T Consensus 151 -------------------------------------------------------------------------------- 150 (241)
T 1lya_B 151 -------------------------------------------------------------------------------- 150 (241)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHhhhhccCCCCCCceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEE
Q 010696 398 EAIFKYADKLCEVLPNPMGKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWV 477 (503)
Q Consensus 398 ~~~~~~~~~~c~~~~~~~~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~I 477 (503)
...|.|.++|+.+..+|+|+|+|+|++++|+|++|+++..+.+...|+++|...+.+.+.++.||
T Consensus 151 ---------------~~~g~~~~~C~~~~~~p~i~f~f~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~i 215 (241)
T 1lya_B 151 ---------------LIQGEYMIPCEKVSTLPAITLKLGGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWI 215 (241)
T ss_dssp ---------------EETTEEEEEGGGGGGSCCEEEEETTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEE
T ss_pred ---------------ccCCcEEEECCCCccCCeEEEEECCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEE
Confidence 11356899999888899999999999999999999998764445689999988765444567899
Q ss_pred eCHhhhcceEEEEeCCCCeEEEEecC
Q 010696 478 LGDMFLRAYHTVFDFGNLQIGFAEAA 503 (503)
Q Consensus 478 LG~~Fl~~~y~vfD~~~~riGfa~~~ 503 (503)
||++|||++|+|||++|+|||||+++
T Consensus 216 lG~~fl~~~y~vfD~~~~~igfA~~~ 241 (241)
T 1lya_B 216 LGDVFIGRYYTVFDRDNNRVGFAEAA 241 (241)
T ss_dssp ECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred echHHhcceEEEEECCCCEEEEEEcC
Confidence 99999999999999999999999985
No 36
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.90 E-value=7.2e-24 Score=174.11 Aligned_cols=92 Identities=58% Similarity=1.046 Sum_probs=85.9
Q ss_pred eeEeceeccCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCC-CcccccCCcccCCCCcccccc-ceeEEEeecee
Q 010696 68 DVVYLNNYLDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLF-SISCYLHSRYRARLSRTYTKI-VPCKIHYGSGQ 145 (503)
Q Consensus 68 ~~~~l~~~~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~-~~~C~~~~~y~p~~SsT~~~~-~~~~~~Yg~gs 145 (503)
..+||.|+.+..|+++|.||||||+|.|+|||||+++||++..|.. ...|..++.|||++|+||+.. +.|.+.|++|+
T Consensus 3 ~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~C~~~~~y~p~~SsT~~~~~~~~~i~Yg~Gs 82 (97)
T 1lya_A 3 IPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSIHCKLLDIACWIHHKYNSDKSSTYVKNGTSFDIHYGSGS 82 (97)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCTTCHHHHTSCCBCGGGCTTCEEEEEEEEEECSSCE
T ss_pred ceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEcCccCcccccCCCCCCCchhCCCceeCCCcEEEEECCcE
Confidence 4689999999999999999999999999999999999999999962 147998999999999999999 99999999999
Q ss_pred EEEEEEEEEEEECC
Q 010696 146 ISGFFSQDNVKIGD 159 (503)
Q Consensus 146 ~~G~~~~D~v~lg~ 159 (503)
+.|.+++|+|+|++
T Consensus 83 ~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 83 LSGYLSQDTVSVPC 96 (97)
T ss_dssp EEEEEEEEEEEESC
T ss_pred EEEEEEEEEEEECC
Confidence 99999999999986
No 37
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.85 E-value=3.3e-21 Score=155.37 Aligned_cols=87 Identities=59% Similarity=1.129 Sum_probs=77.2
Q ss_pred CceEEeCCCCCCCCeEEEEECCEEEEeCcccceEeeccCcceeEEEeeEeccCCCCCCCeEEeCHhhhcceEEEEeCCCC
Q 010696 416 GKSFINCDDIASMPYVSFTIGNRSFPLSPEQYIFKIEEGHSTICISGFIALDVPPPQGPLWVLGDMFLRAYHTVFDFGNL 495 (503)
Q Consensus 416 ~~~~~~C~~~~~~P~i~f~~~g~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~ 495 (503)
|.|.+||+.++++|+|+|+|+|++++|+|++|+++...+....|+++|+..+.+ +.++.||||++|||++|+|||++|+
T Consensus 1 G~y~v~C~~~~~~P~i~f~~gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~-~~~~~~ILGd~Fl~~~y~vfD~~~~ 79 (87)
T 1b5f_B 1 EELQVDCNTLSSMPNVSFTIGGKKFGLTPEQYILKVGKGEATQCISGFTAMDAT-LLGPLWILGDVFMRPYHTVFDYGNL 79 (87)
T ss_dssp CCCEECGGGGGGCCCEEEEETTEEEEECHHHHEEEESCTTTCEEEESEEECCCB-SSSBEEEECHHHHTTEEEEEETTTT
T ss_pred CcEEEECCCCCcCCcEEEEECCEEEEECHHHhEEEccCCCCCEEEEEEEECCCC-CCCCeEEechHHhccEEEEEECCCC
Confidence 578999998889999999999999999999999987654456899999987654 3456899999999999999999999
Q ss_pred eEEEEecC
Q 010696 496 QIGFAEAA 503 (503)
Q Consensus 496 riGfa~~~ 503 (503)
|||||+++
T Consensus 80 riGfA~~~ 87 (87)
T 1b5f_B 80 LVGFAEAA 87 (87)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEcC
Confidence 99999985
No 38
>3rfi_A Asp; PSI, saposin, hydrolase; 1.90A {Solanum tuberosum}
Probab=99.51 E-value=1.5e-15 Score=126.59 Aligned_cols=106 Identities=53% Similarity=1.025 Sum_probs=76.5
Q ss_pred CccccccccceeeeecchhhhhhhhcCCCCCcccccCcceeeCCCcccccceeeeeecccCCCCCCCccccchhhhHHHH
Q 010696 306 AEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYNGSSYMSTGIETVVQHKTSNGSSINESTLCAFCEMIVF 385 (503)
Q Consensus 306 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (503)
|.|.++..|+.++++|+..|++.|++.++|..+|.++|+|..++...++.++..++.+.. ..++..+...|.+|||++.
T Consensus 3 a~g~~~~~C~~~V~~Y~~~ii~~l~~~~~P~~iC~~lglC~~~~~~~~~~~i~~vv~~~~-~~~~~~~~~~C~~Ce~~V~ 81 (108)
T 3rfi_A 3 AMAIVSMECKTIVSQYGEMIWDLLVSGVRPDQVCSQAGLCFVDGAQHVSSNIKTVVERET-EGSSVGEAPLCTACEMAVV 81 (108)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHTTSSCC-------------------------CCHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHcCCcCCCccccccccccccccccc-ccccCCCCCcChhHHHHHH
Confidence 445677889999999999999999999999999999999999988777777777776542 1122126788999999999
Q ss_pred HHHHHHhhhhhHHHHHHHHhhhhccCC
Q 010696 386 WIQMQLKQQKTKEAIFKYADKLCEVLP 412 (503)
Q Consensus 386 ~~~~~~~~~~~~~~~~~~~~~~c~~~~ 412 (503)
|+++.|+++.|+++|+++++++|..+|
T Consensus 82 ~ie~~L~~N~Te~eI~~~l~k~C~~LP 108 (108)
T 3rfi_A 82 WMQNQLKQEGTKEKVLEYVNQLCEKIP 108 (108)
T ss_dssp HHHHHHTSHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHhcCchHHHHHHHHHHHHhhCc
Confidence 999999999999999999999999876
No 39
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=96.76 E-value=0.0009 Score=51.69 Aligned_cols=40 Identities=28% Similarity=0.635 Sum_probs=37.8
Q ss_pred cccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010696 374 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 413 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 413 (503)
...|..|++++.|+++.++.+.|+++|.++++++|..+|.
T Consensus 2 ~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 41 (80)
T 3bqp_A 2 GGFCEVCKKLVGYLDRNLEKNSTKQEILAALEKGCSFLPD 41 (80)
T ss_dssp CTTHHHHHHHHHHHHHHSCTTCCHHHHHHHHHHHGGGSCG
T ss_pred cCcchhHHHHHHHHHHHHHcccHHHHHHHHHHHHHHhCCC
Confidence 4579999999999999999999999999999999999985
No 40
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=96.75 E-value=0.0012 Score=51.55 Aligned_cols=41 Identities=37% Similarity=0.636 Sum_probs=38.3
Q ss_pred cccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCC
Q 010696 374 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNP 414 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 414 (503)
+..|..|++++.|+++.++.+.|+++|.++++++|..+|..
T Consensus 3 ~~~C~~C~~~v~~~~~~l~~n~t~~~I~~~l~~~C~~lp~~ 43 (83)
T 4ddj_A 3 SLPCDICKDVVTAAGDMLKDNATEEEILVYLEKTCDWLPKP 43 (83)
T ss_dssp CHHHHHHHHHHHHHHHHHHSTTHHHHHHHHHHHHHTTSCTT
T ss_pred CCcchHHHHHHHHHHHHHHcCccHHHHHHHHHHHHHhCCCc
Confidence 56799999999999999999999999999999999999853
No 41
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=96.62 E-value=0.0013 Score=52.23 Aligned_cols=42 Identities=29% Similarity=0.604 Sum_probs=39.1
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCC
Q 010696 373 ESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNP 414 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 414 (503)
+...|..|++++.|+++.++.+.|+++|.++++++|..+|..
T Consensus 4 ~~~~C~~C~~vv~~i~~~l~~n~t~~~I~~~l~~~C~~lp~~ 45 (91)
T 2qyp_A 4 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPKS 45 (91)
T ss_dssp CHHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHTSCSS
T ss_pred CCCcchHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHCCCC
Confidence 457899999999999999999999999999999999999864
No 42
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=95.86 E-value=0.0066 Score=47.17 Aligned_cols=41 Identities=29% Similarity=0.615 Sum_probs=37.7
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010696 373 ESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 413 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 413 (503)
+...|..|++++.++++.++.+.|+++|.+.+.++|..+|.
T Consensus 3 ~~~~C~~C~~~v~~i~~~l~~~~t~~~I~~~l~~~C~~lp~ 43 (83)
T 2gtg_A 3 SDVYCEVCEFLVKEVTKLIDNNKTEKEILDAFDKMCSKLPK 43 (83)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHTTSSCH
T ss_pred CCCcChhHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHCCC
Confidence 45689999999999999999999999999999999998874
No 43
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=95.85 E-value=0.0075 Score=46.69 Aligned_cols=41 Identities=22% Similarity=0.384 Sum_probs=37.9
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhH-HHHHHHHhhhhccCCC
Q 010696 373 ESTLCAFCEMIVFWIQMQLKQQKTK-EAIFKYADKLCEVLPN 413 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~c~~~~~ 413 (503)
+...|..|++++..+++.++.+.|+ ++|.+.+.+.|..+|.
T Consensus 2 ~~~~C~~C~~~V~~ve~~l~~n~t~~~~I~~~l~~~C~~lp~ 43 (81)
T 1n69_A 2 DGDVCQDCIQMVTDIQTAVRTNSTFVQALVEHVKEECDRLGP 43 (81)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHGGGGCT
T ss_pred CCCcchHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHcCc
Confidence 4568999999999999999999999 9999999999999984
No 44
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=95.31 E-value=0.011 Score=44.92 Aligned_cols=38 Identities=16% Similarity=0.232 Sum_probs=35.6
Q ss_pred ccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010696 375 TLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 413 (503)
Q Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 413 (503)
..|..|++++..+...+ .+.|+++|.+.+++.|..+|.
T Consensus 2 ~~C~~C~~~v~~le~~l-~n~Te~~I~~~L~~vC~~l~~ 39 (74)
T 1l9l_A 2 RDYRTCLTIVQKLKKMV-DKPTQRSVSNAATRVCRTGRS 39 (74)
T ss_dssp HHHHHHHHHHHHHHHHC-SSCCHHHHHHHHHHGGGSSCH
T ss_pred CCChHHHHHHHHHHHHh-cccCHHHHHHHHHHHHHhCCh
Confidence 36999999999999999 999999999999999999874
No 45
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=95.26 E-value=0.011 Score=45.46 Aligned_cols=38 Identities=18% Similarity=0.438 Sum_probs=36.4
Q ss_pred cchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCC
Q 010696 376 LCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPN 413 (503)
Q Consensus 376 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~ 413 (503)
.|..|++++..+.+.++.+.|+++|.+.+++.|..+|.
T Consensus 3 ~C~~C~~iv~~ve~~l~~~~t~~~I~~~l~~~C~~lp~ 40 (78)
T 1nkl_A 3 FCESCRKIIQKLEDMVGPQPNEDTVTQAASQVCDKLKI 40 (78)
T ss_dssp HHHHHHHHHHHHHHHHCSSCCHHHHHHHHHHHHHHSCS
T ss_pred cchHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHhhCch
Confidence 59999999999999999999999999999999999975
No 46
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=95.07 E-value=0.011 Score=45.24 Aligned_cols=40 Identities=18% Similarity=0.414 Sum_probs=36.6
Q ss_pred cccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCC
Q 010696 374 STLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNP 414 (503)
Q Consensus 374 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~ 414 (503)
...|..|++++..+.+.++.+ |+++|.+.+++.|..+|..
T Consensus 2 ~~~C~~C~~vv~~ve~~l~~n-t~~~I~~~l~~~C~~lp~~ 41 (77)
T 1of9_A 2 EILCNLCTGLINTLENLLTTK-GADKVKDYISSLCNKASGF 41 (77)
T ss_dssp CSSHHHHHHHHHHHHHHCSSS-CSHHHHHHHHHHHTTCSST
T ss_pred CCcchhHHHHHHHHHHHHHHC-cHHHHHHHHHHHHHcCChH
Confidence 357999999999999999999 9999999999999999743
No 47
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=94.97 E-value=0.049 Score=47.05 Aligned_cols=92 Identities=22% Similarity=0.258 Sum_probs=54.2
Q ss_pred cCceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCccccccceeEEEeecee--EEEEEEEE
Q 010696 76 LDAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIVPCKIHYGSGQ--ISGFFSQD 153 (503)
Q Consensus 76 ~~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~Yg~gs--~~G~~~~D 153 (503)
....+++++.|+. +++++++|||++.+.+...... .+.-....+. .+. ....|.|. ..|.+..+
T Consensus 23 ~~~~~~v~v~InG--~~~~~LvDTGAs~s~is~~~a~---~lgl~~~~~~----~~~-----~~a~g~g~~~~~~~~~~~ 88 (148)
T 2i1a_A 23 QVPMLYINIEINN--YPVKAFVDTGAQTTIMSTRLAK---KTGLSRMIDK----RFI-----GEARGVGTGKIIGRIHQA 88 (148)
T ss_dssp CCCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HHTGGGGCBC----CCC----------------CEEEEEE
T ss_pred ccceEEEEEEECC--EEEEEEEECCCCccccCHHHHH---HcCCCccCCc----ceE-----EEEecCCCcccccEEEEE
Confidence 4678999999987 8999999999999988632211 1211111111 110 01122222 35666778
Q ss_pred EEEECCeEeeeeEEEEEEeeCCccccccccceeeeccc
Q 010696 154 NVKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGF 191 (503)
Q Consensus 154 ~v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~ 191 (503)
.+.+|+...+ ..|.+.. . +.|||||+.+
T Consensus 89 ~i~ig~~~~~-~~~~vl~--~-------~~d~iLG~d~ 116 (148)
T 2i1a_A 89 QVKIETQYIP-CSFTVLD--T-------DIDVLIGLDM 116 (148)
T ss_dssp EEEETTEEEE-EEEEEEC--S-------SCSEEECHHH
T ss_pred EEEECCEEec-eeEEEec--C-------CCCeEecHHH
Confidence 9999998764 5555442 1 3589999873
No 48
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.54 E-value=0.3 Score=41.96 Aligned_cols=26 Identities=15% Similarity=0.119 Sum_probs=23.4
Q ss_pred eEEeCHhhhcceEEEEeCCCCeEEEE
Q 010696 475 LWVLGDMFLRAYHTVFDFGNLQIGFA 500 (503)
Q Consensus 475 ~~ILG~~Fl~~~y~vfD~~~~riGfa 500 (503)
..|||..||+++-...|+.++++-|.
T Consensus 109 d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 109 DVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CeEecHHHHhhCCEEEECCCCEEEEc
Confidence 46999999999999999999998773
No 49
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=92.47 E-value=0.038 Score=44.44 Aligned_cols=50 Identities=24% Similarity=0.357 Sum_probs=41.8
Q ss_pred ccccchhhhHHHHHHHHHHhhhhhHHHHHHHHhhhhccCCCCCCceEEeCCC
Q 010696 373 ESTLCAFCEMIVFWIQMQLKQQKTKEAIFKYADKLCEVLPNPMGKSFINCDD 424 (503)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~C~~ 424 (503)
+...|..|++++.++.+.+ +.|+++|++.+++.|..+|.....+.-.|..
T Consensus 20 ~~~~C~~C~~vV~~ve~~l--n~t~~~I~~~L~~~C~~lp~~ipf~~~~C~~ 69 (99)
T 2js9_A 20 SALSCQMCELVVKKYEGSA--DKDANVIKKDFDAECKKLFHTIPFGTRECDH 69 (99)
T ss_dssp CSSTHHHHHHHHHHHTTTS--SCCHHHHHHHHHHHHHTGGGGSTTHHHHHHT
T ss_pred CCCcchhHHHHHHHHHHHH--HhhHHHHHHHHHHHHHcCCCcchHHHHHHHH
Confidence 5778999999999999999 8899999999999999998543334455654
No 50
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.93 E-value=0.29 Score=42.29 Aligned_cols=92 Identities=15% Similarity=0.273 Sum_probs=55.5
Q ss_pred CceEEEEEEecCCCceEEEEEcCCCCCeeEeCCCCCCCcccccCCcccCCCCccccccceeEEEeece--eEEEEEEEEE
Q 010696 77 DAQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCLFSISCYLHSRYRARLSRTYTKIVPCKIHYGSG--QISGFFSQDN 154 (503)
Q Consensus 77 ~~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~~~~~C~~~~~y~p~~SsT~~~~~~~~~~Yg~g--s~~G~~~~D~ 154 (503)
-..|++++.|.. +++++++|||++.+.+...-.. .|.-...-+. .+. ....+-| ...|.+....
T Consensus 22 ~~~l~v~~~Ing--~~v~~LVDTGAs~s~Is~~~A~---rlGL~~~~~~----~~~-----~~a~g~G~~~~~g~v~~~~ 87 (148)
T 3s8i_A 22 VTMLYINCKVNG--HPLKAFVDSGAQMTIMSQACAE---RCNIMRLVDR----RWA-----GVAKGVGTQRIIGRVHLAQ 87 (148)
T ss_dssp CCCCEEEEEETT--EEEEEEECTTCSSCEEEHHHHH---HTTCGGGEEG----GGC-----EECCC---CEEEEEEEEEE
T ss_pred cCEEEEEEEECC--EEEEEEEeCCCCcEeeCHHHHH---HcCCccccCc----cee-----EEEEcCCccEEEEEEEEEE
Confidence 568999999986 9999999999999998643221 2321110000 000 0111222 2467777889
Q ss_pred EEECCeEeeeeEEEEEEeeCCccccccccceeeeccc
Q 010696 155 VKIGDMIIKDQEFVEVTKEGLLPFLALQFDGILGLGF 191 (503)
Q Consensus 155 v~lg~~~i~~~~Fg~~~~~~~~~~~~~~~dGIlGLg~ 191 (503)
+++|+..++ ..|.+.. ....|+|||+-+
T Consensus 88 I~Ig~~~~~-~~~~Vle--------~~~~d~LLGmD~ 115 (148)
T 3s8i_A 88 IQIEGDFLQ-CSFSILE--------DQPMDMLLGLDM 115 (148)
T ss_dssp EEETTEEEE-EEEEEET--------TCSSSEEECHHH
T ss_pred EEECCEEEE-EEEEEeC--------CCCcCeeccHHH
Confidence 999997763 4444432 123589999873
No 51
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=91.87 E-value=0.44 Score=41.17 Aligned_cols=26 Identities=19% Similarity=0.149 Sum_probs=23.3
Q ss_pred eEEeCHhhhcceEEEEeCCCCeEEEE
Q 010696 475 LWVLGDMFLRAYHTVFDFGNLQIGFA 500 (503)
Q Consensus 475 ~~ILG~~Fl~~~y~vfD~~~~riGfa 500 (503)
..|||..||+++-.+.|++++++-|.
T Consensus 108 d~LLGmD~L~~~~~~ID~~~~~L~l~ 133 (148)
T 3s8i_A 108 DMLLGLDMLRRHQCSIDLKKNVLVIG 133 (148)
T ss_dssp SEEECHHHHHHTTCEEETTTTEEECT
T ss_pred CeeccHHHHHhCCEEEEcCCCEEEEc
Confidence 46999999999999999999998763
No 52
>2js9_A Saposin-like protein family protein 5; caenopore-5, saposin-like fold, antimicrobial protein; NMR {Caenorhabditis elegans} PDB: 2jsa_A
Probab=90.66 E-value=0.036 Score=44.60 Aligned_cols=39 Identities=23% Similarity=0.392 Sum_probs=36.0
Q ss_pred cccccccceeeeecchhhhhhhhcCCCCCcccccCccee
Q 010696 308 GIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 346 (503)
Q Consensus 308 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 346 (503)
+++...|+.++++|...|.+.|.+...|+.+|.++++|+
T Consensus 61 pf~~~~C~~~V~~y~~~II~~L~~~~~P~~VC~~L~lC~ 99 (99)
T 2js9_A 61 PFGTRECDHYVNSKVDPIIHELEGGTAPKDVCTKLNECP 99 (99)
T ss_dssp TTHHHHHHTTTTTTHHHHHHHHHHTCCTTHHHHHTTCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCCC
Confidence 446788999999999999999999999999999999994
No 53
>2qyp_A Proactivator polypeptide; saposin, activator protein, alternative splicing, disease mutation, gaucher disease, glycoprotein, GM2- gangliosidosis; 2.45A {Homo sapiens} SCOP: a.64.1.1 PDB: 2z9a_A
Probab=90.23 E-value=0.059 Score=42.48 Aligned_cols=39 Identities=41% Similarity=0.713 Sum_probs=34.7
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCcceeeC
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCVYN 348 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 348 (503)
+...|+.++++|+..|++.|.+..+|+.+|..+++|..+
T Consensus 46 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~~~ 84 (91)
T 2qyp_A 46 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCSGT 84 (91)
T ss_dssp TTTTHHHHHHHHHHHHHHHHHHTCCHHHHHHTTTCC---
T ss_pred cccchHHHHHHHHHHHHHHHHHcCCHHHHHhhcCCCCCc
Confidence 578899999999999999999999999999999999664
No 54
>3bqp_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid binding protein, acid ceramidase,farber disease, lipid metabolism; 1.30A {Homo sapiens} PDB: 3bqq_C 2rb3_A 2r1q_A 2r0r_A
Probab=88.34 E-value=0.08 Score=40.38 Aligned_cols=37 Identities=35% Similarity=0.676 Sum_probs=34.7
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCccee
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 346 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 346 (503)
+...|+.++++|+..|++.|.+..+|+.+|..+++|.
T Consensus 43 ~~~~C~~~v~~y~~~ii~~l~~~~~P~~iC~~l~~C~ 79 (80)
T 3bqp_A 43 YQKQCDQFVAEYEPVLIEILVEVMDPSFVCLKIGACP 79 (80)
T ss_dssp GHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHTTSSC
T ss_pred cchhhHHHHHHHHHHHHHHHHHCCCHHHHHhhcCCCC
Confidence 5678999999999999999999999999999999994
No 55
>2gtg_A Proactivator polypeptide; saposin, sphingolipid activator protein, lipid-binding prote binding protein; 2.40A {Homo sapiens} SCOP: a.64.1.1 PDB: 1m12_A 1sn6_A
Probab=85.19 E-value=0.079 Score=40.88 Aligned_cols=37 Identities=43% Similarity=0.783 Sum_probs=34.5
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCccee
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 346 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 346 (503)
+...|+.+++.|...|++.|.+..+|..+|..+++|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~~~~~P~~iC~~l~lC~ 81 (83)
T 2gtg_A 45 LSEECQEVVDTYGSSILSILLEEVSPELVCSMLHLCS 81 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTSCC
T ss_pred chhHHHHHHHHHHHHHHHHHHHCCCHHHHHHhcCCCC
Confidence 4567999999999999999999999999999999994
No 56
>1nkl_A NK-lysin; saposin fold, antibacterial peptide, tumourolytic peptide; NMR {Sus scrofa} SCOP: a.64.1.1
Probab=84.85 E-value=0.081 Score=40.44 Aligned_cols=37 Identities=24% Similarity=0.554 Sum_probs=34.8
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCccee
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 346 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 346 (503)
+...|+.++++|...|.+.|.+...|+.+|.++++|.
T Consensus 41 ~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC~ 77 (78)
T 1nkl_A 41 LRGLCKKIMRSFLRRISWDILTGKKPQAICVDIKICK 77 (78)
T ss_dssp THHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHTTCSC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHCCCHHHHHhccCCCC
Confidence 5678999999999999999999999999999999994
No 57
>1of9_A Pore-forming peptide ameobapore A; toxin, saplip, amoebapore A; NMR {Entamoeba histolytica} SCOP: a.64.1.4
Probab=83.88 E-value=0.082 Score=40.31 Aligned_cols=37 Identities=16% Similarity=0.390 Sum_probs=34.3
Q ss_pred ccccccceeeeecchhhhhhhhcCCCCCcccccCcce
Q 010696 309 IVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLC 345 (503)
Q Consensus 309 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 345 (503)
.+...|+.++++|...|.+.|.+...|+.+|..+++|
T Consensus 41 ~~~~~C~~~V~~y~~~iI~~l~~~~~P~~IC~~l~lC 77 (77)
T 1of9_A 41 FIATLCTKVLDFGIDKLIQLIEDKVDANAICAKIHAC 77 (77)
T ss_dssp TTHHHHHHHHHHCHHHHHHHHHHTCCHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhcCCC
Confidence 3567899999999999999999999999999999987
No 58
>4ddj_A Saposin-A, protein A; saposin fold, sphingolipid activator protein, galactosylcera lauryldimethylamine-N-oxide, lipid, detergent, lysosome; HET: LDA; 1.90A {Homo sapiens} PDB: 2dob_A*
Probab=76.88 E-value=0.15 Score=39.32 Aligned_cols=37 Identities=32% Similarity=0.652 Sum_probs=33.7
Q ss_pred cccccceeeeecchhhhhhhhcC-CCCCcccccCccee
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISG-VQPETVCSDIGLCV 346 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~c~ 346 (503)
+...|+.+++.|+..|.+.+.+. .+|..+|..+++|.
T Consensus 45 ~~~~C~~~v~~y~~~ii~~l~~~~~~p~~vC~~l~lC~ 82 (83)
T 4ddj_A 45 MSASCKEIVDSYLPVILDIIKGEMSRPGEVCSALNLCE 82 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHTTSCC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHccCCHHHHHhHcCCCC
Confidence 36789999999999999999998 59999999999994
No 59
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=76.31 E-value=3.2 Score=33.03 Aligned_cols=29 Identities=24% Similarity=0.305 Sum_probs=24.7
Q ss_pred EEEEEecCCCceEEEEEcCCCCCeeEeCCCC
Q 010696 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 111 (503)
Q Consensus 81 ~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C 111 (503)
++.|.||. |.++.++|||.+++-+...+.
T Consensus 10 ~vtvkI~G--q~~eaLLDTGAD~TVl~~~~~ 38 (99)
T 2hs1_A 10 LVTIKIGG--QLKEALLDTGADDTIIEEMSL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSEEESCCSS
T ss_pred EEEEEECC--EEEEEEeccCCCcEEEecccC
Confidence 46788997 999999999999999975554
No 60
>1l9l_A Granulysin; saposin fold, membrane-lytic, antimicrobial protein; HET: MPO; 0.92A {Homo sapiens} SCOP: a.64.1.1
Probab=76.13 E-value=0.28 Score=36.99 Aligned_cols=33 Identities=18% Similarity=0.479 Sum_probs=30.4
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccC
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDI 342 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 342 (503)
+...|+.+++.|+..|.+.|..+.+|..+|.++
T Consensus 41 ~~~~C~~~V~~y~~~Ii~~L~~~~~P~~IC~~i 73 (74)
T 1l9l_A 41 WRDVCRNFMRRYQSRVIQGLVAGETAQQICEDL 73 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHhhc
Confidence 567799999999999999999999999999875
No 61
>1n69_A Saposin B; lipid binding protein, glycosphingolipid activator protein; HET: PEH; 2.20A {Homo sapiens} SCOP: a.64.1.3
Probab=74.85 E-value=0.23 Score=38.16 Aligned_cols=36 Identities=22% Similarity=0.695 Sum_probs=31.0
Q ss_pred cccccceeeeecchhhhhhhhcCCCCCcccccCccee
Q 010696 310 VSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLCV 346 (503)
Q Consensus 310 ~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~ 346 (503)
+...|+.++++|+..+.+.+. ..+|..+|.++|+|.
T Consensus 45 ~~~~C~~~V~~y~~~ii~~l~-~~~P~~iC~~lglC~ 80 (81)
T 1n69_A 45 MADICKNYISQYSEIAIQMMM-HMQPKEICALVGFCD 80 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHT-TSCHHHHHHHTTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHh-cCCHHHHHhhcCCCC
Confidence 567899999999997776555 799999999999994
No 62
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=73.60 E-value=3.3 Score=33.30 Aligned_cols=28 Identities=18% Similarity=0.256 Sum_probs=24.0
Q ss_pred eEEEEEEecCCCceEEEEEcCCCCCeeEeC
Q 010696 79 QYYGEIGIGSPPQSFSVVFDTGSSNLWVPS 108 (503)
Q Consensus 79 ~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~ 108 (503)
.-++.|.||. |.++.++|||.+++-+..
T Consensus 8 RP~v~v~I~G--q~~e~LLDTGAD~TVl~~ 35 (104)
T 1fmb_A 8 RPTTIVLIND--TPLNVLLDTGADTSVLTT 35 (104)
T ss_dssp CCEEEEEETT--EEEEEEECTTCSSCEEEH
T ss_pred CCEEEEEECC--EEEEEEeccCCCcEEEcc
Confidence 3457799997 999999999999999973
No 63
>3vcm_P Prorenin; aspartic proteases, hydrolase; HET: NAG; 2.93A {Homo sapiens}
Probab=73.15 E-value=2.3 Score=28.14 Aligned_cols=23 Identities=17% Similarity=0.094 Sum_probs=19.6
Q ss_pred ceEEEeeeeeccchhhHHHhccc
Q 010696 31 GLLRIQLKKRQLGINTINAARLI 53 (503)
Q Consensus 31 ~~~~ipL~~~~~~~~~~~~~~~~ 53 (503)
+++||||+|.++.++++.+.+..
T Consensus 7 ~l~RIPL~k~kS~R~~l~e~g~~ 29 (43)
T 3vcm_P 7 TFKRIFLKRMPSIRESLKERGVD 29 (43)
T ss_dssp CCEEEEEEECCCHHHHHHHHTCC
T ss_pred ceeEEeeeecccHHHHHHHcCch
Confidence 56899999999999998887643
No 64
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=73.01 E-value=3.4 Score=33.60 Aligned_cols=32 Identities=19% Similarity=0.294 Sum_probs=26.0
Q ss_pred EEEEEec---CCCceEEEEEcCCCCCeeEeCCCCC
Q 010696 81 YGEIGIG---SPPQSFSVVFDTGSSNLWVPSSKCL 112 (503)
Q Consensus 81 ~~~i~iG---tPpQ~~~v~~DTGSs~~wV~~~~C~ 112 (503)
.+.|.|| +|+|.++.++|||.+++-+...++.
T Consensus 12 lvtikI~~~~~~Gq~~eaLLDTGADdTVl~~~~lP 46 (116)
T 3liy_A 12 VIKAQVDTQTSHPKTIEALLDTGADMTVIPIALFS 46 (116)
T ss_dssp EEEEEEECSSSCCEEEEEEECTTBSSCEEEGGGSC
T ss_pred eEEEEEccccCCCeEeEEEeccCCCccEEecccCC
Confidence 3455565 7899999999999999999876664
No 65
>3s64_A AC-SLP-1, saposin-like protein 1; lipid-binding, lipid binding protein; HET: CIT EPE; 2.30A {Ancylostoma caninum}
Probab=71.10 E-value=1 Score=34.93 Aligned_cols=50 Identities=22% Similarity=0.321 Sum_probs=40.4
Q ss_pred HHHHHHHHh-CCccccccccceeeeecchhhhhhhhcCCCCCcccccCcce
Q 010696 296 VVAQINHAI-GAEGIVSMQCKTVVFEYGNMIWEFLISGVQPETVCSDIGLC 345 (503)
Q Consensus 296 ~~~~l~~~l-~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c 345 (503)
.+++.=+.+ ++.++....|+.++.+|...|.+.|.++..|+++|..+..|
T Consensus 37 ~~d~~Ckk~~~~ip~a~k~C~~~v~~~~d~II~eLe~g~~P~~VC~~L~~C 87 (87)
T 3s64_A 37 EFIQGCMTLIGWLPYAEKECKALAKIEMGAIKTLLENGSAPEEICTTLHAC 87 (87)
T ss_dssp HHHHHHHHHHCSSTTHHHHHHHHHHHHHHHHHHHHHTTCCTTTHHHHHHCC
T ss_pred HHHHHHHHhcccCCchHHHHHHHHHHhHHHHHHHHHcCCCHHHHHHHhccC
Confidence 334443333 55566678899999999999999999999999999998876
No 66
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=69.59 E-value=5.3 Score=31.70 Aligned_cols=29 Identities=24% Similarity=0.239 Sum_probs=24.6
Q ss_pred EEEEEecCCCceEEEEEcCCCCCeeEeCCCC
Q 010696 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKC 111 (503)
Q Consensus 81 ~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C 111 (503)
++.|.||. |.++.++|||.+++-+...+.
T Consensus 10 ~vti~I~G--q~~e~LLDTGAD~TVl~~~~~ 38 (99)
T 3ec0_A 10 VVTAYIEG--QPVEVLLDTGADDSIVAGIEL 38 (99)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEESSCCC
T ss_pred eEEEEECC--EEEEEEEecCCCceEEcCccc
Confidence 56789997 999999999999999965544
No 67
>1tzs_P Activation peptide from cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=66.25 E-value=3 Score=25.58 Aligned_cols=21 Identities=19% Similarity=0.270 Sum_probs=17.1
Q ss_pred ceEEEeeeeeccchhhHHHhc
Q 010696 31 GLLRIQLKKRQLGINTINAAR 51 (503)
Q Consensus 31 ~~~~ipL~~~~~~~~~~~~~~ 51 (503)
+++||||+|.++.++.+.+.+
T Consensus 2 ~l~rIpL~K~~s~r~~l~~~g 22 (35)
T 1tzs_P 2 SLHRVPLRRHPSLKKKLRARS 22 (35)
T ss_pred cEEEEEeEEchHHHHHHHHcc
Confidence 478999999998888776644
No 68
>1htr_P Progastricsin (Pro segment); aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_P
Probab=62.63 E-value=4.2 Score=26.28 Aligned_cols=22 Identities=23% Similarity=0.320 Sum_probs=17.9
Q ss_pred eEEEeeeeeccchhhHHHhccc
Q 010696 32 LLRIQLKKRQLGINTINAARLI 53 (503)
Q Consensus 32 ~~~ipL~~~~~~~~~~~~~~~~ 53 (503)
++||||+|.++.++.+.+.+..
T Consensus 2 l~RIpL~K~~s~R~~l~~~g~~ 23 (43)
T 1htr_P 2 VVKVPLKKFKSIRETMKEKGLL 23 (43)
T ss_dssp CEEEEEEECCCHHHHHHHTTCH
T ss_pred eEEEeeeEcchHHHHHHHcCcH
Confidence 6899999999998888775543
No 69
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=59.07 E-value=8.5 Score=31.49 Aligned_cols=25 Identities=16% Similarity=0.216 Sum_probs=22.0
Q ss_pred EEecCCCceEEEEEcCCCCCeeEeCCC
Q 010696 84 IGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (503)
Q Consensus 84 i~iGtPpQ~~~v~~DTGSs~~wV~~~~ 110 (503)
|.||. |.++.++|||.+++-+...+
T Consensus 18 ikI~G--q~~eaLLDTGAD~TVi~~~~ 42 (116)
T 2hah_A 18 IFVNG--YPIKFLLDTGADITVLNRRD 42 (116)
T ss_dssp EEETT--EEEEEEECTTCSSCEEEGGG
T ss_pred EEECC--EEEEEEecCCCCcEEEcccc
Confidence 89996 99999999999999987543
No 70
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=55.55 E-value=12 Score=30.43 Aligned_cols=30 Identities=10% Similarity=0.105 Sum_probs=25.2
Q ss_pred EEEEEecCCCceEEEEEcCCCCCeeEeCCCCC
Q 010696 81 YGEIGIGSPPQSFSVVFDTGSSNLWVPSSKCL 112 (503)
Q Consensus 81 ~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~C~ 112 (503)
.+.+.||. |.++.++|||.+++-+...+.+
T Consensus 11 ~vti~I~G--q~~eaLLDTGADdTVi~~~~lp 40 (114)
T 3sqf_A 11 SLTLWLDD--KMFTGLINTGADVTIIKLEDWP 40 (114)
T ss_dssp EEEEEETT--EEEEEEECTTCSSCEEEGGGSC
T ss_pred eEEEEECC--EEEEEEEccCCCceEEecccCC
Confidence 45688887 9999999999999999866553
No 71
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=46.79 E-value=22 Score=29.74 Aligned_cols=31 Identities=16% Similarity=0.270 Sum_probs=25.6
Q ss_pred ceEEEEEEecCCCceEEEEEcCCCCCeeEeCCC
Q 010696 78 AQYYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (503)
Q Consensus 78 ~~Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~ 110 (503)
..-++.+.|+. |.++.++|||.+++.+...+
T Consensus 21 ~RP~v~i~I~G--~~~~~LlDTGAd~tVl~~~~ 51 (132)
T 3slz_A 21 PEPRITLKVGG--QPVTFLVDTGAQHSVLTQNP 51 (132)
T ss_dssp CSSEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CCCEEEEEECC--EEEEEEEeCCCCeEEEcccc
Confidence 34567789987 99999999999999987543
No 72
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=39.99 E-value=29 Score=33.34 Aligned_cols=42 Identities=17% Similarity=0.183 Sum_probs=30.4
Q ss_pred cCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHH
Q 010696 245 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 296 (503)
Q Consensus 245 g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~ 296 (503)
|.+...|+..+..|.++ |.||.+.+ .+++|||++.+++|..-
T Consensus 4 g~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 4 GVATNTPTANDEEYITP---VTIGGTTL-------NLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEEECGGGSCEEEE---EEETTEEE-------EEEEETTCCCEEECBTT
T ss_pred CceeeeecCCCCEEEEE---EEECCEEE-------EEEEeCCCcceEEecCC
Confidence 55666677666677654 56775444 49999999999999753
No 73
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=39.14 E-value=28 Score=28.70 Aligned_cols=22 Identities=9% Similarity=0.193 Sum_probs=18.6
Q ss_pred ceEEEEEcCCCCCeeEeCCCCC
Q 010696 91 QSFSVVFDTGSSNLWVPSSKCL 112 (503)
Q Consensus 91 Q~~~v~~DTGSs~~wV~~~~C~ 112 (503)
|.++.++|||.+++-+...+.+
T Consensus 30 q~~eaLLDTGAD~TVl~~~~lP 51 (124)
T 2rsp_A 30 VYITALLDSGADITIISEEDWP 51 (124)
T ss_dssp EEEEEEECTTCSSCEEETTTSC
T ss_pred EEEEEEecCCCCcEEEecccCC
Confidence 7789999999999999866553
No 74
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=37.53 E-value=24 Score=27.54 Aligned_cols=17 Identities=35% Similarity=0.526 Sum_probs=14.6
Q ss_pred ceEEEccCccCcccCHH
Q 010696 279 CTAILDSGTSVLAGPTT 295 (503)
Q Consensus 279 ~~aiiDTGTt~i~lP~~ 295 (503)
..++||||++.+++|..
T Consensus 28 ~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 28 FTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp EEEEEETTCCCEEEEBT
T ss_pred EEEEEeCCCCceEEeEc
Confidence 45999999999999964
No 75
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=37.34 E-value=32 Score=33.10 Aligned_cols=42 Identities=17% Similarity=0.192 Sum_probs=30.0
Q ss_pred cCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHH
Q 010696 245 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 296 (503)
Q Consensus 245 g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~ 296 (503)
|.+...|+..+..|.++ |.||.+.+ .+++|||++.+++|..-
T Consensus 3 ~~v~~~~~~~~~~Y~~~---i~iG~Q~~-------~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNNDEEYLTP---VTVGKSTL-------HLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTTSCEEEE---EEEBTEEE-------EEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCCCEEEEE---EEECCEEE-------EEEEeCCCccceEeeCC
Confidence 45566676666667655 56775444 49999999999999753
No 76
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=36.45 E-value=36 Score=32.72 Aligned_cols=42 Identities=14% Similarity=0.175 Sum_probs=29.8
Q ss_pred cCeeEEecccccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHH
Q 010696 245 GSHIYVPITEKGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTV 296 (503)
Q Consensus 245 g~l~~~p~~~~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~ 296 (503)
|.+...|+.....|.++ |.||.+.+ .+++|||++.+++|..-
T Consensus 4 ~~v~~~~~~~~~~Y~~~---i~iG~q~~-------~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSNDEEYITQ---VTVGDDTL-------GLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGGCCEEEE---EEETTEEE-------EEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCCCEEEEE---EEECCEEE-------EEEEcCCCcceEEecCC
Confidence 45556676666667654 56774444 49999999999999753
No 77
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=36.42 E-value=29 Score=31.25 Aligned_cols=29 Identities=24% Similarity=0.279 Sum_probs=24.5
Q ss_pred EEEEEEecCCCceEEEEEcCCCCCeeEeCCC
Q 010696 80 YYGEIGIGSPPQSFSVVFDTGSSNLWVPSSK 110 (503)
Q Consensus 80 Y~~~i~iGtPpQ~~~v~~DTGSs~~wV~~~~ 110 (503)
-.+.|.||. |.++.++|||.+++-+...+
T Consensus 9 P~vtv~I~G--q~~e~LLDTGAD~TVl~~~~ 37 (203)
T 3ka2_A 9 PLVTIRIGG--QLKEALLDTGADDTVIEELN 37 (203)
T ss_dssp CEEEEEETT--EEEEEEECTTCSSCEECSCC
T ss_pred CeEEEEECC--EEEEEEEecCCCceEEeccc
Confidence 467799997 99999999999999986443
No 78
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=26.94 E-value=55 Score=31.81 Aligned_cols=42 Identities=19% Similarity=0.174 Sum_probs=28.8
Q ss_pred ccCeeEEeccc--ccceEEEEeeEEEc--CeEeeeccCCceEEEccCccCcccCHH
Q 010696 244 RGSHIYVPITE--KGYWQIKVGDILIE--NSSTGFCEDGCTAILDSGTSVLAGPTT 295 (503)
Q Consensus 244 ~g~l~~~p~~~--~~~w~v~l~~i~v~--~~~~~~~~~~~~aiiDTGTt~i~lP~~ 295 (503)
+|.+..+|+.. +..|.+. |.|| .+. ..+++|||++.+++|..
T Consensus 4 ~g~~~~~~l~~~~~~~Y~~~---i~iGtP~q~-------~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 4 DGSVDTPGLYDFDLEEYAIP---VSIGTPGQD-------FYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp -CCEEEEEEEETTTTEEEEE---EEETTTTEE-------EEEEEETTCCCCEEEBT
T ss_pred CCccceEEeecCCCCEEEEE---EEECCCCcE-------EEEEEcCCCCCeEECCC
Confidence 35666777764 4456554 5677 343 34999999999999964
No 79
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=25.85 E-value=35 Score=27.13 Aligned_cols=34 Identities=18% Similarity=0.185 Sum_probs=25.6
Q ss_pred eEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHHHHH
Q 010696 258 WQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTTVVA 298 (503)
Q Consensus 258 w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~~~~ 298 (503)
|+=.+-.+.|+|+.+. +++|||+-.+.+......
T Consensus 6 ~~RP~v~v~I~Gq~~e-------~LLDTGAD~TVl~~~~w~ 39 (104)
T 1fmb_A 6 EKRPTTIVLINDTPLN-------VLLDTGADTSVLTTAHYN 39 (104)
T ss_dssp SSCCEEEEEETTEEEE-------EEECTTCSSCEEEHHHHH
T ss_pred cCCCEEEEEECCEEEE-------EEeccCCCcEEEccccCc
Confidence 4434455888888654 999999999999976553
No 80
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=25.61 E-value=68 Score=30.72 Aligned_cols=40 Identities=15% Similarity=0.024 Sum_probs=27.0
Q ss_pred CeeEE-ecccccceEEEEeeEEEc--CeEeeeccCCceEEEccCccCcccCHH
Q 010696 246 SHIYV-PITEKGYWQIKVGDILIE--NSSTGFCEDGCTAILDSGTSVLAGPTT 295 (503)
Q Consensus 246 ~l~~~-p~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~aiiDTGTt~i~lP~~ 295 (503)
.+.-. |...+..|.++ |.|| .+. ..+++|||++.+++|..
T Consensus 4 ~v~~~~~~~~~~~Y~~~---i~iGTP~Q~-------~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 4 SATTTPIDSLDDAYITP---VQIGTPAQT-------LNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEESSTTCCCEEEE---EEETTTTEE-------EEEEEETTCCCEEECBT
T ss_pred eeEeeecCCCCCEEEEE---EEECCCCeE-------EEEEECCCCCCeEEecC
Confidence 34445 55555566554 6677 443 34999999999999964
No 81
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=25.48 E-value=39 Score=27.47 Aligned_cols=30 Identities=13% Similarity=0.164 Sum_probs=24.9
Q ss_pred ceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCH
Q 010696 257 YWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 294 (503)
Q Consensus 257 ~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~ 294 (503)
.|+=.+- +.|+|+.+. +++|||+-.+.++.
T Consensus 11 l~~rP~v-ikI~Gq~~e-------aLLDTGAD~TVi~~ 40 (116)
T 2hah_A 11 EKRPEIL-IFVNGYPIK-------FLLDTGADITVLNR 40 (116)
T ss_dssp SSCCEEE-EEETTEEEE-------EEECTTCSSCEEEG
T ss_pred ccCCCEE-EEECCEEEE-------EEecCCCCcEEEcc
Confidence 4666667 999998764 99999999998885
No 82
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=24.81 E-value=84 Score=28.55 Aligned_cols=39 Identities=21% Similarity=0.186 Sum_probs=27.3
Q ss_pred eEeceeccCceEEEE---EEecCC-----CceEEEEEcCCCCCeeEeCC
Q 010696 69 VVYLNNYLDAQYYGE---IGIGSP-----PQSFSVVFDTGSSNLWVPSS 109 (503)
Q Consensus 69 ~~~l~~~~~~~Y~~~---i~iGtP-----pQ~~~v~~DTGSs~~wV~~~ 109 (503)
.+|+.+ ...|.++ |.||.- .....+++|||++.+++|..
T Consensus 181 ~~p~~~--~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~ 227 (239)
T 1b5f_A 181 YVPVTY--QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTA 227 (239)
T ss_dssp EEEEEE--ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHH
T ss_pred EEEccc--CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHH
Confidence 455554 3456664 778862 34578999999999999854
No 83
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=24.78 E-value=72 Score=30.54 Aligned_cols=42 Identities=17% Similarity=0.056 Sum_probs=27.6
Q ss_pred cCeeEE-ecccccceEEEEeeEEEc--CeEeeeccCCceEEEccCccCcccCHHH
Q 010696 245 GSHIYV-PITEKGYWQIKVGDILIE--NSSTGFCEDGCTAILDSGTSVLAGPTTV 296 (503)
Q Consensus 245 g~l~~~-p~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~aiiDTGTt~i~lP~~~ 296 (503)
|.+.-. |...+..|.++ |.|| .+. ..+++|||++.+++|...
T Consensus 3 ~~v~~~~~~~~~~~Y~~~---i~iGTP~Q~-------~~v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 3 GSAPNHPSDSADSEYITS---VSIGTPAQV-------LPLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEEEESSTTCCCEEEE---EEETTTTEE-------EEEEEETTCCCEEECBTT
T ss_pred cceeeecCCCCCCEEEEE---EEECCCCeE-------EEEEEcCCCCCeEEecCC
Confidence 344445 44455566554 6677 343 349999999999999753
No 84
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=24.59 E-value=33 Score=27.05 Aligned_cols=30 Identities=23% Similarity=0.303 Sum_probs=23.4
Q ss_pred eEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCH
Q 010696 258 WQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPT 294 (503)
Q Consensus 258 w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~ 294 (503)
|+=.+-.+.++|+.+. +++|||+-.+.+.+
T Consensus 6 ~~rP~vtvkI~Gq~~e-------aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 6 WKRPLVTIKIGGQLKE-------ALLDTGADDTIIEE 35 (99)
T ss_dssp SSCCEEEEEETTEEEE-------EEECTTCSSEEESC
T ss_pred cCCCEEEEEECCEEEE-------EEeccCCCcEEEec
Confidence 4444556888998764 99999999998875
No 85
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=22.71 E-value=40 Score=26.59 Aligned_cols=29 Identities=24% Similarity=0.367 Sum_probs=23.1
Q ss_pred eEEEEeeEEEcCeEeeeccCCceEEEccCccCcccC
Q 010696 258 WQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGP 293 (503)
Q Consensus 258 w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP 293 (503)
|+=.+-.+.++|+.+. +++|||.-.+.+.
T Consensus 6 ~~RP~vti~I~Gq~~e-------~LLDTGAD~TVl~ 34 (99)
T 3ec0_A 6 WKRPVVTAYIEGQPVE-------VLLDTGADDSIVA 34 (99)
T ss_dssp SSCCEEEEEETTEEEE-------EEECTTCSSCEES
T ss_pred ccCCeEEEEECCEEEE-------EEEecCCCceEEc
Confidence 5555666889998764 8999999999875
No 86
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=22.55 E-value=82 Score=30.10 Aligned_cols=39 Identities=15% Similarity=0.011 Sum_probs=25.5
Q ss_pred eeEEecccccceEEEEeeEEEc--CeEeeeccCCceEEEccCccCcccCHH
Q 010696 247 HIYVPITEKGYWQIKVGDILIE--NSSTGFCEDGCTAILDSGTSVLAGPTT 295 (503)
Q Consensus 247 l~~~p~~~~~~w~v~l~~i~v~--~~~~~~~~~~~~aiiDTGTt~i~lP~~ 295 (503)
+.-.+...+..|.++ |.|| .+.+ .+++|||++.+++|..
T Consensus 6 v~~~~~~~~~~Y~~~---i~iGTP~q~~-------~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 6 VPMTDYGNDIEYYGQ---VTIGTPGKKF-------NLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEETTTTEEEEE---EEETTTTEEE-------EEEEETTCCCCEEEBT
T ss_pred eeeeecCCCCEEEEE---EEECCCCeEE-------EEEEcCCCCCEEEccC
Confidence 333344445556554 5677 4443 4999999999999864
No 87
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=20.72 E-value=84 Score=29.93 Aligned_cols=42 Identities=24% Similarity=0.338 Sum_probs=26.4
Q ss_pred CeeEEeccc--ccceEEEEeeEEEcCeEeeeccCCceEEEccCccCcccCHH
Q 010696 246 SHIYVPITE--KGYWQIKVGDILIENSSTGFCEDGCTAILDSGTSVLAGPTT 295 (503)
Q Consensus 246 ~l~~~p~~~--~~~w~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~i~lP~~ 295 (503)
++...|+.+ +..|.++ |.||.- .....+++|||++.+++|..
T Consensus 2 ~~~~~~l~n~~~~~Y~~~---i~iGtP-----~q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 2 EVASVPLTNYLDSQYFGK---IYLGTP-----PQEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp CCEEEEEEEETTTEEEEE---EEETTT-----TEEEEEEEETTCCCEEEEBT
T ss_pred CcceeeeEeccCCEEEEE---EEECCC-----CeEEEEEEeCCccceEEcCC
Confidence 344556643 3445543 566632 12345999999999999964
Done!